Query 018185
Match_columns 359
No_of_seqs 145 out of 358
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 11:16:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyl_A Phosphatidylinositol-bi 100.0 5.1E-60 1.7E-64 451.6 22.9 247 12-279 12-263 (271)
2 1hx8_A Synapse-enriched clathr 100.0 1.4E-59 4.8E-64 454.3 23.7 251 1-279 3-270 (299)
3 3zym_A Phosphatidylinositol-bi 100.0 2.6E-59 8.7E-64 454.4 22.8 266 12-298 12-292 (310)
4 1eyh_A Epsin; superhelix of he 99.4 2.5E-13 8.6E-18 118.0 9.4 117 31-154 4-121 (144)
5 1inz_A EPS15-interacting porte 99.4 2.9E-13 1E-17 118.0 8.8 117 31-154 22-139 (148)
6 1xgw_A Epsin 4; ENTH, enthopro 99.1 7E-10 2.4E-14 99.2 10.4 113 32-154 34-151 (176)
7 3onk_A Epsin-3, ENT3; helix, p 99.0 4.4E-10 1.5E-14 98.1 8.7 116 31-154 10-128 (150)
8 1vdy_A Hypothetical protein (R 98.4 1E-06 3.5E-11 76.0 10.2 115 34-154 13-129 (140)
9 1elk_A Target of MYB1; superhe 96.5 0.0069 2.4E-07 52.6 7.7 78 32-110 16-93 (157)
10 3rru_A TOM1L1 protein; structu 96.2 0.013 4.4E-07 50.8 7.5 80 30-110 14-93 (152)
11 3g2s_A C-terminal fragment of 96.1 0.026 9E-07 48.7 9.0 78 31-110 10-87 (149)
12 3ldz_A STAM-1, signal transduc 96.0 0.025 8.5E-07 48.1 8.6 77 32-110 5-81 (140)
13 1x5b_A Signal transducing adap 95.6 0.038 1.3E-06 48.3 8.1 77 32-110 15-91 (163)
14 3zyq_A Hepatocyte growth facto 95.6 0.028 9.7E-07 51.5 7.7 78 31-110 7-84 (226)
15 1mhq_A ADP-ribosylation factor 95.4 0.029 1E-06 48.2 6.8 76 33-110 2-77 (148)
16 1dvp_A HRS, hepatocyte growth 95.2 0.038 1.3E-06 50.2 7.1 76 33-110 6-81 (220)
17 1juq_A ADP-ribosylation factor 95.2 0.037 1.3E-06 48.7 6.7 77 32-110 13-89 (171)
18 3bej_E Nuclear receptor coacti 35.4 16 0.00054 21.9 1.3 11 94-104 14-24 (26)
No 1
>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*
Probab=100.00 E-value=5.1e-60 Score=451.56 Aligned_cols=247 Identities=19% Similarity=0.273 Sum_probs=222.0
Q ss_pred hhhhccchhhhhhcCCCCccchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHH
Q 018185 12 IIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKS 91 (359)
Q Consensus 12 ~lKD~asi~~A~~~~~~~~~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKa 91 (359)
.+.|+-...+-.+.+ +++++||+|||+|++ +|||+|||++||.+|+++++++++++++|.+|++ ++||+|||||
T Consensus 12 ~~~~~~~~~~~~~~~----s~l~~aV~KATs~~~-~~Pk~Khv~~il~~T~~~~~~~~~~~~~L~~Rl~-~~~w~v~~Ka 85 (271)
T 3zyl_A 12 SLTDRITAAQHSVTG----SAVSKTVCKATTHEI-MGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTT-NSSWVVVFKS 85 (271)
T ss_dssp CHHHHHHHHHHHHHH----HHHHHHHHHHTCSSS-SCCCHHHHHHHHHHHHSTTSCHHHHHHHHHHHTT-SSCHHHHHHH
T ss_pred cHHHHHHHHHhcccc----hHHHHHHHhcCCCCC-CCCCHHHHHHHHHHHccCCCcHHHHHHHHHHHhC-CCchHHHHHH
Confidence 345555555555543 379999999999998 9999999999999999999999999999999999 7999999999
Q ss_pred HHHHHHHHhcCCcchHHHhhhccCCCCCCceeccCCCCCCCCCccchhHHHHHHHHHHHHHHhhhhhcccccccCCCCcc
Q 018185 92 LIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLSSSSSSVE 171 (359)
Q Consensus 92 LIviH~LlreG~~~f~d~l~~y~s~~g~~~L~Ls~F~D~ss~~s~~~s~~VR~Ya~YLdeRl~~~r~l~~d~~~~~s~~~ 171 (359)
||++|+||++|+|.+.+++. +++ ++|+|++|.|.+++.+|++++|||+|++||++|+.+|+.++.|+++.+.
T Consensus 86 LivlH~llreG~~~~l~~~~----~~~-~~~~Ls~f~d~~~~~~~~~s~~Ir~Ya~yL~eRl~~f~~~~~d~~~~k~--- 157 (271)
T 3zyl_A 86 LITTHHLMVYGNERFIQYLA----SRN-TLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFTKVKR--- 157 (271)
T ss_dssp HHHHHHHHHHSCHHHHHHHH----HCS-CCCCCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTSCC---
T ss_pred HHHHHHHHhcCCHHHHHHHH----hCC-CeechhccCCCCCCCcccccHHHHHHHHHHHHHHHHHHHhCCCccccCC---
Confidence 99999999999998877662 233 6899999999987788999999999999999999999999999986532
Q ss_pred cchhhhhhhccChHHHHHHHHHHHHHHHHh-ccCCCCcCCCCcHHHHHHHHHHHHH---HHHHHHHHHH-HHhhhhcccc
Q 018185 172 MDKEEEKVSALVNIDLLKEVDSLLSLLEQM-CKTPDCLHVRGNPLVDDIMGLVGED---YLSAINEVSI-RVSEFNNRLG 246 (359)
Q Consensus 172 ~~~~~~~~~~L~~~~LL~~l~~LQ~lid~l-~~~p~~~~~~~N~lI~~af~Ll~~D---ly~~inEgvi-lLe~ffEm~~ 246 (359)
..++++++|+++.||+++|.||+||+++ +|+|.+.+ .+|+++++||.||++| +|+++||||| +||+||||.
T Consensus 158 --~~~~~~r~~~~~~Ll~~l~~lQ~lld~ll~~~~~~~~-~~N~li~~A~~lLv~es~~lY~~in~gii~lLe~ffem~- 233 (271)
T 3zyl_A 158 --GADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNE-LTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMK- 233 (271)
T ss_dssp --STTSHHHHCCHHHHHHHHHHHHHHHHHHHTTCCCGGG-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGSC-
T ss_pred --CCCCccccCCHHHHHHHHHHHHHHHHHHHccCccccc-ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 2345788999999999999999999995 99999975 9999999999999999 7999999999 999999985
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhHHhhhHHHHH
Q 018185 247 CLSLGDSVELACALKRLEDCKERLSVLSHRKRV 279 (359)
Q Consensus 247 ~l~~~dA~~aL~iyKrf~~qtE~l~~f~~~~k~ 279 (359)
+.||++||+|||||.+|+|+|++||++||.
T Consensus 234 ---~~da~~aleiykrf~~Q~~~L~~Fy~~ck~ 263 (271)
T 3zyl_A 234 ---KNQCKEGLDIYKKFLTRMTRISEFLKVAEQ 263 (271)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999998
No 2
>1hx8_A Synapse-enriched clathrin adaptor protein LAP; all alpha, alpha helices repeats, coiled-coil, endocytosis/exocytosis complex; 2.20A {Drosophila melanogaster} SCOP: a.7.8.2 a.118.9.3
Probab=100.00 E-value=1.4e-59 Score=454.26 Aligned_cols=251 Identities=20% Similarity=0.249 Sum_probs=209.8
Q ss_pred CchhhHHHHHHhhh-hccchhhhhhcCCCCccchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHh
Q 018185 1 MNMGRLANLMGIIK-DKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRL 79 (359)
Q Consensus 1 ~~~~k~r~~~g~lK-D~asi~~A~~~~~~~~~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL 79 (359)
|..++||+++|++| |++++ ++++||+|||+|++ +|||+|||++||.+|+.+++++++++++|.+|.
T Consensus 3 ~~~~~~~~~~~a~k~~~~~~------------~l~kaV~KAT~~~~-~ppk~Khv~~ii~~t~~~~~~~~~~~~~L~~R~ 69 (299)
T 1hx8_A 3 MAGQTINDRLLAARHSLAGQ------------GLAKSVCKATTEEC-IGPKKKHLDYLVHCANEPNVSIPHLANLLIERS 69 (299)
T ss_dssp -------------------C------------HHHHHHHHHSCSSS-SCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhhccchh------------HHHHHHHhccCCCC-CCCCHHHHHHHHHHHcCCCCCHHHHHHHHHhhc
Confidence 34458999999999 99884 46779999999997 999999999999999999999999999999996
Q ss_pred CcCCChhHHHHHHHHHHHHHhcCCcchHHHhhhccCCCCCCceeccCCCCCCC-----------CCccchhHHHHHHHHH
Q 018185 80 QTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTT-----------PLTWELSSWVRWYALY 148 (359)
Q Consensus 80 ~~T~~W~ValKaLIviH~LlreG~~~f~d~l~~y~s~~g~~~L~Ls~F~D~ss-----------~~s~~~s~~VR~Ya~Y 148 (359)
.|+||+|||||||++|+|||+|+|.|.+++. + ++++|+|++|+|.++ +.+|++++|||+|++|
T Consensus 70 -~~~~w~va~K~LivlH~llreG~~~~~~~l~---~--~~~~l~l~~f~D~~~~~~~~~~~~~~~~~~d~s~~Ir~Ya~y 143 (299)
T 1hx8_A 70 -QNANWVVVYKSLITTHHLMAYGNERFMQYLA---S--SNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRYAKY 143 (299)
T ss_dssp -TCSSHHHHHHHHHHHHHHHHHSCHHHHHHHH---H--TTCCCCCTTCCCCCC---CCSSCCCTTHHHHHHHHHHHHHHH
T ss_pred -cCCcHHHHHHHHHHHHHHHhcCCHHHHHHHH---h--CCcccchhhhhcccccccccccccccccccchhHHHHHHHHH
Confidence 5789999999999999999999999988883 2 357999999999865 3578999999999999
Q ss_pred HHHHHhhhhhcccccccCCCCcccchhhhhhhccChHHHHHHHHHHHHHHHH-hccCCCCcCCCCcHHHHHHHHHHHHH-
Q 018185 149 LEHLLSTSRVLGFFLSSSSSSVEMDKEEEKVSALVNIDLLKEVDSLLSLLEQ-MCKTPDCLHVRGNPLVDDIMGLVGED- 226 (359)
Q Consensus 149 LdeRl~~~r~l~~d~~~~~s~~~~~~~~~~~~~L~~~~LL~~l~~LQ~lid~-l~~~p~~~~~~~N~lI~~af~Ll~~D- 226 (359)
|++|+.+|+.+++|+++.+. +..+++++.|+++.||++++.||+||++ ++|.|.+.+ .+|+++++||.+|++|
T Consensus 144 L~~r~~~f~~~~~d~~~~~~----~~~~~~~~~l~~~~lL~~l~~lQ~li~~ll~~~~~~~~-~~n~~~~~Al~llv~Ds 218 (299)
T 1hx8_A 144 LNEKSLSYRAMAFDFCKVKR----GKEEGSLRSMNAEKLLKTLPVLQAQLDALLEFDCQSND-LSNGVINMSFMLLFRDL 218 (299)
T ss_dssp HHHHHHHHHHHSSCGGGC---------CCCTTTCCHHHHHHHHHHHHHHHHHHHTTCCCGGG-CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccccc----CccccchhhCCHHHHHHHHHHHHHHHHHHHCCCCCccc-ccchHHHHHHHHHHHHH
Confidence 99999999999999975431 1234578889999999999999999999 589998864 8999999999999999
Q ss_pred --HHHHHHHHHH-HHhhhhccccCCChhhHHHHHHHHHHHHHhhhhHHhhhHHHHH
Q 018185 227 --YLSAINEVSI-RVSEFNNRLGCLSLGDSVELACALKRLEDCKERLSVLSHRKRV 279 (359)
Q Consensus 227 --ly~~inEgvi-lLe~ffEm~~~l~~~dA~~aL~iyKrf~~qtE~l~~f~~~~k~ 279 (359)
+|+++|||+| +||+||||. +.||.+||+|||||.+|+|+|++||++||.
T Consensus 219 ~~lY~~i~~gi~~lLe~~fem~----~~d~~~al~iykrf~~q~~~L~~Fy~~c~~ 270 (299)
T 1hx8_A 219 IRLFACYNDGIINLLEKYFDMN----KKHARDALDLYKKFLVRMDRVGEFLKVAEN 270 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999 999999985 599999999999999999999999999998
No 3
>3zym_A Phosphatidylinositol-binding clathrin assembly PR vesicle-associated membrane protein...; endocytosis, synaptobrevin, VAMP2, VAMP3, AP180; HET: PO4; 2.03A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-59 Score=454.43 Aligned_cols=266 Identities=18% Similarity=0.262 Sum_probs=227.6
Q ss_pred hhhhccchhhhhhcCCCCccchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHH
Q 018185 12 IIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKS 91 (359)
Q Consensus 12 ~lKD~asi~~A~~~~~~~~~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKa 91 (359)
.+.|+-...+-.+.+ +++++||+|||+|++ +|||+|||++||.+|+++++++++++++|.+|++ ++||+|||||
T Consensus 12 ~~~~~~~~~~~~~~~----s~l~~aV~KATs~~~-~pPk~Khv~~il~~T~~~~~~~~~i~~~L~~Rl~-~~~w~vv~Ka 85 (310)
T 3zym_A 12 SLTDRITAAQHSVTG----SAVSKTVCKATTHEI-MGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTT-NSSWVVVFKS 85 (310)
T ss_dssp CHHHHHHHHHHCCHH----HHHHHHHHHHTCSSS-SCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHHTT-SSCHHHHHHH
T ss_pred cHHHHHHHHHhcccc----cHHHHHHHhcCcCCC-CCCChhHHHHHHHHHccCCCcHHHHHHHHHhhcC-CCchHHHHHH
Confidence 355555555555543 389999999999998 9999999999999999999999999999999999 7999999999
Q ss_pred HHHHHHHHhcCCcchHHHhhhccCCCCCCceeccCCCCCCCCCccchhHHHHHHHHHHHHHHhhhhhcccccccCCCCcc
Q 018185 92 LIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLSSSSSSVE 171 (359)
Q Consensus 92 LIviH~LlreG~~~f~d~l~~y~s~~g~~~L~Ls~F~D~ss~~s~~~s~~VR~Ya~YLdeRl~~~r~l~~d~~~~~s~~~ 171 (359)
||++|+|||+|+|.|.+++. +++ ++|+|++|.|.+++.+|++++|||+|++||++|+.+|+.++.|+++.+.+
T Consensus 86 LivlH~llreG~~~~l~~~~----~~~-~~~~Ls~f~d~~~~~g~~~~~~Ir~Ya~yL~~Rl~~f~~~~~d~~~~~~~-- 158 (310)
T 3zym_A 86 LITTHHLMVYGNERFIQYLA----SRN-TLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFTKVKRG-- 158 (310)
T ss_dssp HHHHHHHHHHSCHHHHHHHH----HCS-CCCCCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTSCCS--
T ss_pred HHHHHHHHhcCCHHHHHHHH----hCC-CeeecccccCCCCcCcccccHHHHHHHHHHHHHHHHHHHhCCCcccccCC--
Confidence 99999999999999877662 233 68999999999877889999999999999999999999999999765322
Q ss_pred cchhhhhhhccChHHHHHHHHHHHHHHHHh-ccCCCCcCCCCcHHHHHHHHHHHHH---HHHHHHHHHH-HHhhhhcccc
Q 018185 172 MDKEEEKVSALVNIDLLKEVDSLLSLLEQM-CKTPDCLHVRGNPLVDDIMGLVGED---YLSAINEVSI-RVSEFNNRLG 246 (359)
Q Consensus 172 ~~~~~~~~~~L~~~~LL~~l~~LQ~lid~l-~~~p~~~~~~~N~lI~~af~Ll~~D---ly~~inEgvi-lLe~ffEm~~ 246 (359)
.++++++|+++.||++++.||+||+++ +|+|.+.+ .+|+++++||.+|++| +|+++|||+| +||+||||.
T Consensus 159 ---~~~~~r~~~~~~Ll~~l~~lQ~lid~ll~~~~~~~~-~~N~l~~~A~~llv~ds~~lY~~inegii~lLe~ffem~- 233 (310)
T 3zym_A 159 ---ADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNE-LTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMK- 233 (310)
T ss_dssp ---TTSHHHHCCHHHHHHHHHHHHHHHHHHHTSCCCGGG-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSC-
T ss_pred ---CCCccccCCHHHHHHHHHHHHHHHHHHHcCCccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 345788899999999999999999995 99999975 9999999999999999 7999999999 999999985
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhHHhhhHHHHHH----------hHhHHHHHHHHHhHHHHH
Q 018185 247 CLSLGDSVELACALKRLEDCKERLSVLSHRKRVL----------IEAFWGLITALKDKVAKE 298 (359)
Q Consensus 247 ~l~~~dA~~aL~iyKrf~~qtE~l~~f~~~~k~~----------~~~~w~~~~~~k~~~~~~ 298 (359)
+.||++||+|||||..|+|+|+.||.+||.+ -++.=.+++.++..+++|
T Consensus 234 ---~~da~~al~iykrf~~Q~e~L~~Fy~~ck~l~l~~~~iP~L~~~p~d~l~~lq~~i~ev 292 (310)
T 3zym_A 234 ---KNQCKEGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDISGSGSGHMDRVRNLQSEVEGV 292 (310)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------------------CHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccchHHHHHHHHHHHH
Confidence 6999999999999999999999999999983 244455666666666655
No 4
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=99.44 E-value=2.5e-13 Score=118.00 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=95.9
Q ss_pred cchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcC-CChhHHHHHHHHHHHHHhcCCcchHHH
Q 018185 31 LTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTT-HDASVAIKSLIAVHHIVKHGSFILQDQ 109 (359)
Q Consensus 31 ~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T-~~W~ValKaLIviH~LlreG~~~f~d~ 109 (359)
++.++.|..||+.++ .+|+.+++++|..+|++. ..+++++..|.+||.+. ++|.++||||+++|.||++|++.+.++
T Consensus 4 s~~E~~VreAT~~d~-wGP~~~~m~eIa~~T~~~-~~~~~Im~~l~kRL~d~~k~Wr~vyKaL~lleyLl~nGse~vv~~ 81 (144)
T 1eyh_A 4 SEAEIKVREATSNDP-WGPSSSLMSEIADLTYNV-VAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQ 81 (144)
T ss_dssp CHHHHHHHHHTCSSS-SCCCHHHHHHHHHHTTSH-HHHHHHHHHHHHHHSCCGGGHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CHHHHHHHHHhCCCC-CCCCHHHHHHHHHHhCCH-hhHHHHHHHHHHHHccCCcchHHHhHHHHHHHHHHHhCCHHHHHH
Confidence 468999999999997 999999999999999985 56889999999999853 489999999999999999999987776
Q ss_pred hhhccCCCCCCceeccCCCCCCCCCccchhHHHHHHHHHHHHHHh
Q 018185 110 LSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLS 154 (359)
Q Consensus 110 l~~y~s~~g~~~L~Ls~F~D~ss~~s~~~s~~VR~Ya~YLdeRl~ 154 (359)
+... -.....|..|.-.. ..+.|.+..||.+|.+|-+.+.
T Consensus 82 ~~~~----~~~i~~L~~F~y~d-~~g~D~G~~VR~kak~l~~Ll~ 121 (144)
T 1eyh_A 82 CKEN----MYAVQTLKDFQYVD-RDGKDQGVNVREKAKQLVALLR 121 (144)
T ss_dssp HHHT----HHHHHGGGGCCCBC-TTSCBCHHHHHHHHHHHHHHHH
T ss_pred HHHh----hHHHhhhccceeeC-CCccchHHHHHHHHHHHHHHHC
Confidence 6311 11244677774321 2457889999999999988875
No 5
>1inz_A EPS15-interacting portein(epsin); alpha-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.118.9.1
Probab=99.43 E-value=2.9e-13 Score=118.05 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=95.6
Q ss_pred cchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcC-CChhHHHHHHHHHHHHHhcCCcchHHH
Q 018185 31 LTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTT-HDASVAIKSLIAVHHIVKHGSFILQDQ 109 (359)
Q Consensus 31 ~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T-~~W~ValKaLIviH~LlreG~~~f~d~ 109 (359)
.+.++.|..||+.++ .+|+.+++++|..+|++. ..++++++.|.+||.+. ++|.++||||+++|.||++|++.+.++
T Consensus 22 s~~E~~VreAT~~d~-wGP~~~~m~eIa~~T~~~-~~~~eIm~~l~kRL~d~~k~WR~vyKaL~lleyLl~nGse~vv~~ 99 (148)
T 1inz_A 22 SEAEIKVREATSNDP-WGPSSSLMSEIADLTYNV-VAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQ 99 (148)
T ss_dssp CCHHHHHHHHSCCCS-CCCCSCHHHHHHHHHTSS-HHHHHHHHHHHHGGGCCSSCTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHhCCCC-CCcCHHHHHHHHHHhCCH-hhHHHHHHHHHHHHccCCcchhHhhHHHHHHHHHHHhCCHHHHHH
Confidence 379999999999997 899999999999999996 56889999999999863 589999999999999999999987776
Q ss_pred hhhccCCCCCCceeccCCCCCCCCCccchhHHHHHHHHHHHHHHh
Q 018185 110 LSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLS 154 (359)
Q Consensus 110 l~~y~s~~g~~~L~Ls~F~D~ss~~s~~~s~~VR~Ya~YLdeRl~ 154 (359)
+... -.....|..|.-.. ..+.|.+..||.+|.+|-+.+.
T Consensus 100 ~r~~----~~~I~~L~~F~y~d-~~g~D~G~nVR~kAk~l~~LL~ 139 (148)
T 1inz_A 100 CKEN----MYAVQTLKDFQYVD-RDGKDQGVNVREKAKQLVALLR 139 (148)
T ss_dssp HHHT----HHHHHHHHHCCCCC-SSCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHh----HHHHHhhcceeeeC-CCCcCchHHHHHHHHHHHHHhC
Confidence 6311 11234566654321 2457788999999999999875
No 6
>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E
Probab=99.05 E-value=7e-10 Score=99.18 Aligned_cols=113 Identities=14% Similarity=0.137 Sum_probs=93.2
Q ss_pred chhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHh-Cc-CCChhHHHHHHHHHHHHHhcCCcchHHH
Q 018185 32 TLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRL-QT-THDASVAIKSLIAVHHIVKHGSFILQDQ 109 (359)
Q Consensus 32 dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL-~~-T~~W~ValKaLIviH~LlreG~~~f~d~ 109 (359)
++++.|..||+.++ .+|..+++.+|..+|++. ..+++++..|-+|+ .+ .++|.++||||++++.||++|++.+.++
T Consensus 34 ~~E~kVreATnnd~-wGPs~~~m~eIa~~T~~~-~~~~~Im~~L~kRl~~~~~k~WR~vyKaL~LLeYLl~nGse~vv~~ 111 (176)
T 1xgw_A 34 EIESKVREATNDDP-WGPSGQLMGEIAKATFMY-EQFPELMNMLWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTS 111 (176)
T ss_dssp HHHHHHHHHTCSCS-SCCCHHHHHHHHHHTTCT-TTHHHHHHHHHHHHHSSCTTCHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHcCCCC-CCCCHHHHHHHHHHhcCh-hhHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 79999999999997 899999999999999997 45799999999996 53 3799999999999999999999988776
Q ss_pred hhhccCCCCCCce---eccCCCCCCCCCccchhHHHHHHHHHHHHHHh
Q 018185 110 LSVYPSAGGRNYL---KLSNFRDNTTPLTWELSSWVRWYALYLEHLLS 154 (359)
Q Consensus 110 l~~y~s~~g~~~L---~Ls~F~D~ss~~s~~~s~~VR~Ya~YLdeRl~ 154 (359)
+.. +.. .|..|.-. +..+.|.+..||..|..|-+.+.
T Consensus 112 ~r~-------~i~~I~~L~~F~y~-D~~G~D~G~~VR~kAk~i~~LL~ 151 (176)
T 1xgw_A 112 ARE-------HIYDLRSLENYHFV-DEHGKDQGINIRQKVKELVEFAQ 151 (176)
T ss_dssp HHH-------THHHHHGGGGCCCB-CTTSCBCHHHHHHHHHHHHHHHT
T ss_pred HHH-------hHHHHHhhccCeeE-CCCCCChHHHHHHHHHHHHHHHC
Confidence 631 122 26666432 12457889999999999988875
No 7
>3onk_A Epsin-3, ENT3; helix, protein transport; 2.09A {Saccharomyces cerevisiae} PDB: 3onl_A
Probab=99.05 E-value=4.4e-10 Score=98.15 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=93.8
Q ss_pred cchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcC--CChhHHHHHHHHHHHHHhcCCcchHH
Q 018185 31 LTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTT--HDASVAIKSLIAVHHIVKHGSFILQD 108 (359)
Q Consensus 31 ~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T--~~W~ValKaLIviH~LlreG~~~f~d 108 (359)
++.++.|..||+.++ .+|..+++.+|..+|++. ..+.+++..|-+||.+. ++|.++||||++++.||++|++.+.+
T Consensus 10 s~~E~kVreAT~nd~-wGp~~~~m~eIa~~T~~~-~~~~eIm~~l~kRL~d~~~k~WR~vyKaL~lLeyLl~nGse~vv~ 87 (150)
T 3onk_A 10 TEMEGKVREATNNEP-WGASSTLMDQISQGTYNF-REREEILSMIFRRFTEKAGSEWRQIYKALQLLDYLIKHGSERFID 87 (150)
T ss_dssp CHHHHHHHHHTSSCS-SCCCHHHHHHHHHHTTSH-HHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CHHHHHHHHHhCCCC-CCcCHHHHHHHHHHhCCH-HHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 368999999999886 899999999999999986 45789999999999853 48999999999999999999998877
Q ss_pred HhhhccCCCCCCcee-ccCCCCCCCCCccchhHHHHHHHHHHHHHHh
Q 018185 109 QLSVYPSAGGRNYLK-LSNFRDNTTPLTWELSSWVRWYALYLEHLLS 154 (359)
Q Consensus 109 ~l~~y~s~~g~~~L~-Ls~F~D~ss~~s~~~s~~VR~Ya~YLdeRl~ 154 (359)
++.. +...+. |..|.-.. ..+.|.+..||..|..|-+.+.
T Consensus 88 ~~r~-----~~~~i~~L~~F~~~d-~~G~D~G~~VR~kak~l~~LL~ 128 (150)
T 3onk_A 88 DTRN-----SINLIRILETFHYID-SQGRDQGINVRTRVKALIELLS 128 (150)
T ss_dssp HHHT-----THHHHHGGGGCCCBC-TTSCBCHHHHHHHHHHHHHHHT
T ss_pred HHHH-----HHHHHHhhhcccccC-CCCCchHHHHHHHHHHHHHHHc
Confidence 7631 122233 66654332 2456788999999999988875
No 8
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=98.44 E-value=1e-06 Score=75.95 Aligned_cols=115 Identities=15% Similarity=0.105 Sum_probs=91.5
Q ss_pred hhhhhhcCCCCCCCCCChhhHHHHHHhccCCccc-HHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHhhh
Q 018185 34 HLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRAT-AAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSV 112 (359)
Q Consensus 34 ~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~-~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l~~ 112 (359)
++.|.+||+-++ .||.--=+++|-..|+.++.. +.+++..|.+||.+ ++|-|++|||-+|-.|+.+|++.|.+++..
T Consensus 13 ~~~V~~ATs~d~-~~~pgylm~EIA~~T~~s~~~~~~eim~~L~kRL~~-k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~ 90 (140)
T 1vdy_A 13 SRMIDAVTSDED-KVAPVYKLEEICDLLRSSHVSIVKEFSEFILKRLDN-KSPIVKQKALRLIKYAVGKSGSEFRREMQR 90 (140)
T ss_dssp HHHHHHTTCSCS-SCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTS-SSHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHhcCCC-CCCcHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcC-CCcceeehHHHHHHHHHHhCCHHHHHHHHH
Confidence 456889999998 666655578899999887644 58999999999986 689999999999999999999999998853
Q ss_pred ccCCCCCCceeccCCCCCCCC-CccchhHHHHHHHHHHHHHHh
Q 018185 113 YPSAGGRNYLKLSNFRDNTTP-LTWELSSWVRWYALYLEHLLS 154 (359)
Q Consensus 113 y~s~~g~~~L~Ls~F~D~ss~-~s~~~s~~VR~Ya~YLdeRl~ 154 (359)
... .+=.+.+|+....+ .+.+....||.-|+=|-+-+.
T Consensus 91 ~~~----~Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~ll~ 129 (140)
T 1vdy_A 91 NSV----AVRNLFHYKGHPDPLKGDALNKAVRETAHETISAIF 129 (140)
T ss_dssp TTH----HHHTTTTCCCCCCTTTSSCHHHHHHHHHHHHHHHHT
T ss_pred hHH----HHHHHHhcCCCCCcccccchhHHHHHHHHHHHHHHh
Confidence 221 12247778776544 567899999999988877774
No 9
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=96.49 E-value=0.0069 Score=52.61 Aligned_cols=78 Identities=10% Similarity=0.075 Sum_probs=68.5
Q ss_pred chhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 32 TLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 32 dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
.++..|-|||+... .-|+--.+-.|-...+..+....+++++|.+||+..+|..|++-||.++--++..+.+.|..++
T Consensus 16 ~~~~~IekATs~~l-~~~Dw~~~leicD~I~~~~~~~k~a~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~ev 93 (157)
T 1elk_A 16 PVGQRIEKATDGSL-QSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLV 93 (157)
T ss_dssp HHHHHHHHHTCTTC-SSCCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHcCCCC-CCcCHHHHHHHHHHHhCCCccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 68899999999886 6688888888888887766777899999999997557899999999999999999999888777
No 10
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=96.15 E-value=0.013 Score=50.83 Aligned_cols=80 Identities=11% Similarity=0.097 Sum_probs=69.8
Q ss_pred ccchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHH
Q 018185 30 TLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQ 109 (359)
Q Consensus 30 ~~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~ 109 (359)
+..++..|.|||+... .-|+--++-.|-...+..+....+++++|.+||...++..|++-||.++--++..+...|..+
T Consensus 14 ~t~~~~~IekATs~~l-~~~Dw~~ileicD~In~~~~~pkeA~ral~KRl~~~~n~~~~l~AL~LLe~cvkNCG~~fh~e 92 (152)
T 3rru_A 14 ATSVGHLIEKATFAGV-QTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQSL 92 (152)
T ss_dssp GSHHHHHHHHHTCSSC-CSCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTCCBHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CChHHHHHHHHcCCCC-CCccHHHHHHHHHHHhCCCccHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3478999999999987 778888888888888776677789999999999855688899999999999999999999888
Q ss_pred h
Q 018185 110 L 110 (359)
Q Consensus 110 l 110 (359)
+
T Consensus 93 i 93 (152)
T 3rru_A 93 I 93 (152)
T ss_dssp H
T ss_pred H
Confidence 8
No 11
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=96.06 E-value=0.026 Score=48.67 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=70.3
Q ss_pred cchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 31 LTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 31 ~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
..++..|.|||+..- .-|+--++-.|-...+..+....+++++|.+||+ .+|.-|++-+|.++.-++..+.+.|..++
T Consensus 10 ~~~~~~IekATs~~l-~~~dw~~ileicD~I~~~~~~pk~a~ral~krl~-~~n~~v~l~AL~LLe~cvkNCG~~fh~ei 87 (149)
T 3g2s_A 10 ETLEARINRATNPLN-KELDWASINGFCEQLNEDFEGPPLATRLLAHKIQ-SPQEWEAIQALTVLETCMKSCGKRFHDEV 87 (149)
T ss_dssp CCHHHHHHHHSCTTC-SSCCHHHHHHHHHHGGGSSSHHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CcHHHHHHHHcCCCC-CCcCHHHHHHHHHHHHCCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 469999999999997 7789999999988888777777899999999998 58999999999999999999999998777
No 12
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=96.03 E-value=0.025 Score=48.12 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=68.8
Q ss_pred chhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 32 TLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 32 dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
.++..|.|||+..- .-|+--++-.|-...+..+....+++++|.+||.. ++..|++-||.++--++..+.+.|..++
T Consensus 5 p~d~~iekAT~~~l-~~~dw~~ileicD~I~~~~~~~k~a~rai~Krl~~-~n~~~ql~AL~LLe~~vkNcG~~f~~ev 81 (140)
T 3ldz_A 5 PFDQDVEKATSEMN-TAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNH-KDPHVAMQALTLLGACVSNCGKIFHLEV 81 (140)
T ss_dssp TTHHHHHHHTCTTS-SSCCHHHHHHHHHHHTTSTTHHHHHHHHHHHHHTC-SSHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cHHHHHHHHcCCCC-CCcCHHHHHHHHHHHHCCCcCHHHHHHHHHHHHcC-CChHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 47889999999986 77899999999998888777778999999999985 7889999999999999999999988777
No 13
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=95.60 E-value=0.038 Score=48.28 Aligned_cols=77 Identities=18% Similarity=0.178 Sum_probs=67.7
Q ss_pred chhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 32 TLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 32 dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
.++..|.|||+... .-|+--.+-.|-...+..+....+++++|.+||.. ++-.|++-||.++--++..+.+.|..++
T Consensus 15 p~~~~IekATs~~~-~~~Dw~~~leicD~I~~~~~~~keA~ral~krl~~-~n~~vql~AL~LLd~~vkNcG~~Fh~ev 91 (163)
T 1x5b_A 15 PFEQDVEKATNEYN-TTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNH-KVPHVALQALTLLGACVANCGKIFHLEV 91 (163)
T ss_dssp TTHHHHHHHTCTTC-SSCCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHTC-SSHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHcCCCC-CCcCHHHHHHHHHHHhCCCccHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 47899999999885 67899998888888877777778999999999984 7888999999999999999988888777
No 14
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=95.59 E-value=0.028 Score=51.46 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=69.7
Q ss_pred cchhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 31 LTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 31 ~dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
..++..|.|||+... ..|+--++-.|-...+..+....+++++|.+||+ .+|.-|++-||.++--++..+.+.|..++
T Consensus 7 ~~~~~~i~kAT~~~~-~~~dw~~ileicD~I~~~~~~~k~a~ral~krl~-~~n~~v~l~aL~LLe~~vkNcG~~f~~ei 84 (226)
T 3zyq_A 7 GTFERLLDKATSQLL-LETDWESILQICDLIRQGDTQAKYAVNSIKKKVN-DKNPHVALYALEVMESVVKNCGQTVHDEV 84 (226)
T ss_dssp CHHHHHHHHHTCTTC-SSCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred chHHHHHHHHcCCCC-CCcCHHHHHHHHHHHhCCCccHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhcchHHHHhh
Confidence 368999999999986 7789999988888888777778899999999998 58999999999999999999999888777
No 15
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=95.44 E-value=0.029 Score=48.22 Aligned_cols=76 Identities=14% Similarity=0.128 Sum_probs=66.7
Q ss_pred hhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 33 LHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 33 l~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
++..|-|||+... .-|+--.+-.|-...+..+....+++++|.+||+ .+|-.|++-||.++--++..+.+.|..++
T Consensus 2 ~~~~iekATs~~l-~~~dw~~~leicD~I~~~~~~~k~a~rai~krl~-~~n~~vql~AL~LLe~~vkNCG~~fh~ev 77 (148)
T 1mhq_A 2 LELWLNKATDPSM-SEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQ-SPQEKEALYALTVLEMCMNHCGEKFHSEV 77 (148)
T ss_dssp HHHHHHHHHCTTC-SSCCHHHHHHHHHHHHHSSHHHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHcCCCC-CCcCHHHHHHHHHHHHcCCccHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 5678999999886 6788888888888887766667899999999998 58999999999999999999988888777
No 16
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=95.21 E-value=0.038 Score=50.19 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=68.1
Q ss_pred hhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 33 LHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 33 l~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
++..|.|||+... .-|+-..+-.|-...+..+....+++++|.+||.. +|-.|++-+|.++--++..+.+.|..++
T Consensus 6 ~~~~ie~AT~~~~-~~~dw~~~leicd~i~~~~~~~k~a~r~l~krl~~-~n~~~~l~aL~Lle~~vkNcG~~f~~ev 81 (220)
T 1dvp_A 6 FCKNLENATSHLR-LEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNS-PNPHSSCYSLLVLESIVKNCGAPVHEEV 81 (220)
T ss_dssp HHHHHHHHHCTTC-SSCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTC-SSHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHcCCCC-CCcCHHHHHHHHHhhcCCCcCHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 7888999999987 67899998888888887777788999999999985 8999999999999999999888887766
No 17
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=95.19 E-value=0.037 Score=48.72 Aligned_cols=77 Identities=13% Similarity=0.125 Sum_probs=68.4
Q ss_pred chhhhhhhcCCCCCCCCCChhhHHHHHHhccCCcccHHHHHHHHHHHhCcCCChhHHHHHHHHHHHHHhcCCcchHHHh
Q 018185 32 TLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQL 110 (359)
Q Consensus 32 dl~~AIvKATth~~~~pPK~KhV~~IL~~t~~s~~~~~~~v~aL~~RL~~T~~W~ValKaLIviH~LlreG~~~f~d~l 110 (359)
.++..|.|||+... .-|+--.+-.|....+..+....+++++|.+||+ .+|-.|++-+|.++--++..+...|..++
T Consensus 13 ~~~~~IekATs~~l-~~~Dw~~ileicD~I~~~~~~~k~A~ral~krl~-~~n~~vql~AL~LLd~~vkNCG~~Fh~ev 89 (171)
T 1juq_A 13 SLESWLNKATNPSN-RQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQ-SPQEWEALQALTVLEACMKNCGRRFHNEV 89 (171)
T ss_dssp CHHHHHHHHTCTTC-SSCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred cHHHHHHHHcCCCC-CCcCHHHHHHHHHHHHcCCccHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 58899999999886 6789999999988887776677899999999998 47999999999999999999888888777
No 18
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=35.43 E-value=16 Score=21.93 Aligned_cols=11 Identities=27% Similarity=0.579 Sum_probs=9.3
Q ss_pred HHHHHHhcCCc
Q 018185 94 AVHHIVKHGSF 104 (359)
Q Consensus 94 viH~LlreG~~ 104 (359)
++|+|+++|.|
T Consensus 14 ILHrLLQ~~sP 24 (26)
T 3bej_E 14 ILHRLLQEGSP 24 (26)
T ss_pred HHHHHHHcCCC
Confidence 57999999976
Done!