BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018187
         (359 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8IUH2|CREG2_HUMAN Protein CREG2 OS=Homo sapiens GN=CREG2 PE=1 SV=1
          Length = 290

 Score = 41.6 bits (96), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 31/175 (17%)

Query: 116 ARLPPLEEIRTVLDRS-----VRGMLSTFS--QKYEGYPSGSMVDFA----CDADGTPIL 164
           A  PP   +R    RS     V G L+T S  +K +G P G+ +  +     ++ G P  
Sbjct: 114 ASAPPGPRLRAATARSLAHASVWGCLATVSTHKKIQGLPFGNCLPVSDGPFNNSTGIPFF 173

Query: 165 AVSSLAVHTKDLLANPKCSLLVAR-----------DPEDRTDLVITLHGDATSVAEKDKA 213
            +++      DL+ NP  SL++             DPED   + +TL G   +V+ ++  
Sbjct: 174 YMTAKDPVVADLMKNPMASLMLPESEGEFCRKNIVDPEDPRCVQLTLTGQMIAVSPEEVE 233

Query: 214 AIRAVYLAKHPNAF-WVDFGDFQF--MRIEPKAVRYVSGVATALLGSGEFSKEEY 265
             +    ++HP    W    ++ F  MRIE   ++   G      G+   S+EEY
Sbjct: 234 FAKQAMFSRHPGMRKWPRQYEWFFMKMRIEHIWLQKWYG------GASSISREEY 282


>sp|Q27052|FCA1_TRYRA Flagellar calcium-binding protein OS=Trypanosoma rangeli GN=FCABP
           PE=3 SV=1
          Length = 204

 Score = 38.1 bits (87), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 16/163 (9%)

Query: 10  ISLFSRIHVDKTPHSS--PMLRFCHSTTRLSSFTPLSFTLRRQLPMAS-FSAQVGQKS-- 64
           I LF +   + T   S   +   C    +L  FTP     +R    A    +++  K   
Sbjct: 45  IDLFKKFDKNDTGKLSYDEVYSGCIEVLKLDEFTPRVHITKRAFNKAKDKGSKLENKGSE 104

Query: 65  ----IFVYSLCTCDVFLFIYFWDYLIVCFDQAVSTGDVKSDANVFE-LIQKHQEAAARLP 119
                  + L  C  +L+ YF   L V FD+  ++G++  DA  FE  + K ++  A++ 
Sbjct: 105 DFVEFLEFRLMLC--YLYDYF--ELTVMFDEIDTSGNMLLDAKEFEKAVPKLEQWGAKIE 160

Query: 120 PLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTP 162
              E+   LDR+  G + TF + +  + S   +D   D D  P
Sbjct: 161 DPAEVFKELDRNGSGSV-TFDE-FAAWASARKLDVDGDPDNVP 201


>sp|O67377|NNR_AQUAE Bifunctional NAD(P)H-hydrate repair enzyme Nnr OS=Aquifex aeolicus
           (strain VF5) GN=nnr PE=3 SV=1
          Length = 499

 Score = 36.2 bits (82), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 158 ADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDATSVAEK 210
           ADGTP LA       T D+LA    +L+   D E+   L + LHG A  VAEK
Sbjct: 425 ADGTPALAKGG----TGDVLAGILTALIAKMDTEEALKLGVYLHGLAGKVAEK 473


>sp|Q8BGC9|CREG2_MOUSE Protein CREG2 OS=Mus musculus GN=Creg2 PE=1 SV=1
          Length = 288

 Score = 34.3 bits (77), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 28/162 (17%)

Query: 125 RTVLDRSVRGMLSTFS--QKYEGYPSGSMVDFA----CDADGTPILAVSSLAVHTKDLLA 178
           R++   S  G L+T S  +K +G P GS +  +     ++ G P   +++      DL+ 
Sbjct: 126 RSLAHASSWGCLATVSTHEKIQGLPFGSCLAISDGPVHNSTGIPFFYMTAKDPAVADLVK 185

Query: 179 NPKCSLLVAR-----------DPEDRTDLVITLHGDATSVAEKDKAAIRAVYLAKHPNAF 227
           NP  SL++             DPED     +TL G   +V   +    +    ++HP   
Sbjct: 186 NPTASLVLPESEGEFCRKNIVDPEDPRCARLTLTGRMVTVPPGEVEFAKQAMFSRHPGMR 245

Query: 228 -WVDFGDFQFMRIEPKAV---RYVSGVATALLGSGEFSKEEY 265
            W    ++ FM++  + +   ++  GV+       +  +EEY
Sbjct: 246 KWPRQYEWFFMKMWVEHIWLQKWYGGVS-------DIPREEY 280


>sp|O88668|CREG1_MOUSE Protein CREG1 OS=Mus musculus GN=Creg1 PE=2 SV=1
          Length = 220

 Score = 32.3 bits (72), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 24/133 (18%)

Query: 117 RLPPLEE-------IRTVLDRSVRGMLSTFS--QKYEGYPSGSMVDFA----CDADGTPI 163
           RLPPL          R V   S  G L+T S  ++  G+P   ++  +     +  G P 
Sbjct: 45  RLPPLPPREDGPRVARFVTHVSDWGSLATISTIKEVRGWPFADIISISDGPPGEGTGEPY 104

Query: 164 LAVSSLAVHTKDLLANPKCSLLVAR-----------DPEDRTDLVITLHGDATSVAEKDK 212
           + +S L     DL  NP+ +L ++            DP+    + I + G  T V + ++
Sbjct: 105 MYLSPLQQAVSDLQENPEATLTMSLAQTVYCRNHGFDPQSPLCVHIMMSGTVTKVNKTEE 164

Query: 213 AAIRAVYLAKHPN 225
              R     +HP 
Sbjct: 165 DYARDSLFVRHPE 177


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.134    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,891,351
Number of Sequences: 539616
Number of extensions: 5022453
Number of successful extensions: 11051
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 11050
Number of HSP's gapped (non-prelim): 10
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)