Query 018188
Match_columns 359
No_of_seqs 499 out of 2971
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:19:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018188.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018188hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jsk_A Cypbp37 protein; octame 100.0 1.4E-40 4.9E-45 316.3 14.0 275 61-335 49-343 (344)
2 2gjc_A Thiazole biosynthetic e 100.0 2.2E-34 7.4E-39 272.3 17.9 265 63-327 37-325 (326)
3 1rp0_A ARA6, thiazole biosynth 100.0 3.4E-32 1.1E-36 254.0 20.1 280 57-336 5-284 (284)
4 3fpz_A Thiazole biosynthetic e 99.9 1.2E-24 4.1E-29 206.4 21.8 269 59-327 33-325 (326)
5 3v76_A Flavoprotein; structura 99.7 7.2E-17 2.5E-21 158.1 19.0 213 80-322 17-267 (417)
6 2i0z_A NAD(FAD)-utilizing dehy 99.7 1.3E-16 4.4E-21 157.6 20.2 212 89-321 24-276 (447)
7 2gqf_A Hypothetical protein HI 99.7 2.7E-15 9.1E-20 146.3 20.7 204 91-323 4-249 (401)
8 3oz2_A Digeranylgeranylglycero 99.6 7.2E-15 2.5E-19 140.8 14.3 132 91-244 4-163 (397)
9 2cul_A Glucose-inhibited divis 99.6 1.2E-14 4.1E-19 131.0 14.5 197 91-327 3-232 (232)
10 4at0_A 3-ketosteroid-delta4-5a 99.6 1.3E-14 4.3E-19 145.7 14.6 141 90-243 40-264 (510)
11 1qo8_A Flavocytochrome C3 fuma 99.6 1.5E-14 5.2E-19 146.9 13.8 144 89-244 119-313 (566)
12 1y0p_A Fumarate reductase flav 99.6 3.5E-14 1.2E-18 144.4 16.5 144 89-244 124-318 (571)
13 2h88_A Succinate dehydrogenase 99.5 7.4E-14 2.5E-18 143.1 14.6 158 90-258 17-242 (621)
14 3cgv_A Geranylgeranyl reductas 99.5 1E-13 3.4E-18 133.5 14.1 131 91-243 4-162 (397)
15 2bs2_A Quinol-fumarate reducta 99.5 1.6E-13 5.4E-18 141.6 15.4 143 90-243 4-220 (660)
16 3gyx_A Adenylylsulfate reducta 99.5 7.2E-14 2.5E-18 144.1 12.4 145 90-243 21-233 (662)
17 3nlc_A Uncharacterized protein 99.5 1.2E-13 4.2E-18 139.3 13.4 149 91-258 107-289 (549)
18 1d4d_A Flavocytochrome C fumar 99.5 2.9E-13 1E-17 137.7 15.8 143 90-244 125-318 (572)
19 1jnr_A Adenylylsulfate reducta 99.5 1.6E-13 5.5E-18 141.4 13.8 144 90-244 21-219 (643)
20 2wdq_A Succinate dehydrogenase 99.5 2.7E-13 9.3E-18 138.3 14.7 158 90-258 6-231 (588)
21 3dme_A Conserved exported prot 99.5 3.1E-13 1E-17 128.4 14.1 138 91-242 4-208 (369)
22 1kf6_A Fumarate reductase flav 99.5 2.9E-13 9.8E-18 138.5 14.0 142 91-243 5-197 (602)
23 1chu_A Protein (L-aspartate ox 99.5 1.5E-13 5.1E-18 138.9 11.7 144 89-243 6-208 (540)
24 2e5v_A L-aspartate oxidase; ar 99.4 6.7E-13 2.3E-17 131.9 14.0 134 93-243 1-176 (472)
25 3atr_A Conserved archaeal prot 99.4 7.7E-13 2.6E-17 130.6 13.9 135 91-245 6-164 (453)
26 3nyc_A D-arginine dehydrogenas 99.4 8.8E-13 3E-17 126.1 13.6 137 88-243 6-209 (381)
27 1y56_B Sarcosine oxidase; dehy 99.4 1.5E-12 5E-17 125.0 14.6 136 91-243 5-205 (382)
28 3nix_A Flavoprotein/dehydrogen 99.4 1.4E-12 4.9E-17 126.7 14.4 131 91-243 5-166 (421)
29 3e1t_A Halogenase; flavoprotei 99.4 1.6E-12 5.4E-17 130.4 14.8 142 90-245 6-174 (512)
30 3ps9_A TRNA 5-methylaminomethy 99.4 2.2E-12 7.7E-17 133.6 16.3 137 91-244 272-474 (676)
31 3dje_A Fructosyl amine: oxygen 99.4 3.2E-12 1.1E-16 125.1 16.4 138 90-243 5-221 (438)
32 2x3n_A Probable FAD-dependent 99.4 1.6E-12 5.5E-17 125.7 13.6 131 91-243 6-166 (399)
33 2qa1_A PGAE, polyketide oxygen 99.4 3.8E-12 1.3E-16 127.3 15.3 134 89-243 9-165 (500)
34 2qa2_A CABE, polyketide oxygen 99.4 5.1E-12 1.8E-16 126.4 15.6 134 89-243 10-166 (499)
35 3ihg_A RDME; flavoenzyme, anth 99.4 6.3E-12 2.1E-16 126.6 16.1 133 90-243 4-183 (535)
36 3rp8_A Flavoprotein monooxygen 99.4 5.5E-12 1.9E-16 122.4 15.0 131 89-245 21-183 (407)
37 3da1_A Glycerol-3-phosphate de 99.4 3.6E-12 1.2E-16 129.3 13.7 143 90-243 17-232 (561)
38 2gag_B Heterotetrameric sarcos 99.4 4.4E-12 1.5E-16 122.4 13.0 137 90-243 20-230 (405)
39 3pvc_A TRNA 5-methylaminomethy 99.4 9E-12 3.1E-16 129.4 15.9 138 90-244 263-470 (689)
40 3i3l_A Alkylhalidase CMLS; fla 99.3 4.5E-12 1.5E-16 129.3 13.3 133 90-243 22-188 (591)
41 2oln_A NIKD protein; flavoprot 99.3 4.3E-12 1.5E-16 122.6 12.3 134 91-242 4-207 (397)
42 3alj_A 2-methyl-3-hydroxypyrid 99.3 1E-11 3.5E-16 119.4 14.8 126 91-243 11-160 (379)
43 1ryi_A Glycine oxidase; flavop 99.3 6.1E-12 2.1E-16 120.6 12.8 136 90-243 16-219 (382)
44 1k0i_A P-hydroxybenzoate hydro 99.3 3E-12 1E-16 123.5 10.6 135 91-245 2-165 (394)
45 2zxi_A TRNA uridine 5-carboxym 99.3 2.2E-11 7.4E-16 124.0 16.5 137 91-243 27-180 (637)
46 2vou_A 2,6-dihydroxypyridine h 99.3 2.5E-11 8.7E-16 117.4 16.0 129 91-244 5-154 (397)
47 3ces_A MNMG, tRNA uridine 5-ca 99.3 3.2E-11 1.1E-15 123.1 15.9 138 90-243 27-181 (651)
48 2gmh_A Electron transfer flavo 99.3 1E-11 3.4E-16 126.6 12.3 145 91-244 35-218 (584)
49 3ka7_A Oxidoreductase; structu 99.3 4.2E-11 1.5E-15 116.4 16.0 39 92-131 1-39 (425)
50 2gf3_A MSOX, monomeric sarcosi 99.3 2.4E-11 8.1E-16 116.6 14.0 135 91-243 3-205 (389)
51 3fmw_A Oxygenase; mithramycin, 99.3 7.9E-12 2.7E-16 127.0 10.7 132 90-243 48-207 (570)
52 2xdo_A TETX2 protein; tetracyc 99.3 4.3E-11 1.5E-15 115.8 14.9 134 89-245 24-184 (398)
53 3cp8_A TRNA uridine 5-carboxym 99.3 2.5E-11 8.6E-16 123.8 13.0 137 91-243 21-174 (641)
54 4fk1_A Putative thioredoxin re 99.3 2.4E-11 8.2E-16 113.3 11.8 114 89-243 4-117 (304)
55 2r0c_A REBC; flavin adenine di 99.3 6.1E-11 2.1E-15 119.9 15.0 133 89-243 24-196 (549)
56 2qcu_A Aerobic glycerol-3-phos 99.3 6E-11 2E-15 118.6 14.7 141 91-243 3-210 (501)
57 3c96_A Flavin-containing monoo 99.2 5.2E-11 1.8E-15 115.7 13.9 135 91-244 4-170 (410)
58 2uzz_A N-methyl-L-tryptophan o 99.2 3.7E-11 1.3E-15 114.6 12.5 135 91-243 2-204 (372)
59 1pj5_A N,N-dimethylglycine oxi 99.2 7.1E-11 2.4E-15 125.1 15.2 136 91-243 4-207 (830)
60 4a9w_A Monooxygenase; baeyer-v 99.2 2.5E-11 8.7E-16 114.4 10.5 130 91-243 3-132 (357)
61 4gcm_A TRXR, thioredoxin reduc 99.2 4.6E-11 1.6E-15 111.5 11.9 111 90-242 5-115 (312)
62 4dgk_A Phytoene dehydrogenase; 99.2 7.3E-11 2.5E-15 117.4 13.8 56 172-242 222-277 (501)
63 2rgh_A Alpha-glycerophosphate 99.2 1.9E-10 6.4E-15 116.9 16.7 142 91-243 32-250 (571)
64 2pyx_A Tryptophan halogenase; 99.2 1.9E-10 6.3E-15 115.7 15.8 65 166-245 170-235 (526)
65 2bry_A NEDD9 interacting prote 99.2 4.9E-11 1.7E-15 119.2 11.4 135 90-245 91-232 (497)
66 3axb_A Putative oxidoreductase 99.2 6E-11 2.1E-15 116.5 11.7 42 90-132 22-65 (448)
67 3c4n_A Uncharacterized protein 99.2 2.4E-11 8.2E-16 118.1 8.5 135 91-242 36-235 (405)
68 3ab1_A Ferredoxin--NADP reduct 99.2 8.5E-11 2.9E-15 111.9 12.1 117 91-243 14-131 (360)
69 2dkh_A 3-hydroxybenzoate hydro 99.2 1.3E-10 4.6E-15 119.5 14.2 137 91-243 32-211 (639)
70 3f8d_A Thioredoxin reductase ( 99.2 1.4E-10 4.7E-15 107.9 12.7 111 91-243 15-125 (323)
71 2gv8_A Monooxygenase; FMO, FAD 99.2 8.3E-11 2.8E-15 115.8 11.7 141 90-244 5-178 (447)
72 3lzw_A Ferredoxin--NADP reduct 99.2 9.4E-11 3.2E-15 109.6 11.1 116 91-242 7-122 (332)
73 2zbw_A Thioredoxin reductase; 99.2 1.4E-10 4.8E-15 109.0 12.2 116 91-242 5-120 (335)
74 2aqj_A Tryptophan halogenase, 99.2 2.9E-10 9.9E-15 114.6 14.6 64 166-245 160-224 (538)
75 2e4g_A Tryptophan halogenase; 99.1 4.3E-10 1.5E-14 113.7 15.2 65 166-245 189-254 (550)
76 3s5w_A L-ornithine 5-monooxyge 99.1 8.8E-11 3E-15 115.8 9.8 138 90-242 29-191 (463)
77 2weu_A Tryptophan 5-halogenase 99.1 3E-10 1E-14 113.6 13.3 64 166-245 168-232 (511)
78 1yvv_A Amine oxidase, flavin-c 99.1 2.1E-10 7.2E-15 107.7 11.5 131 92-242 3-161 (336)
79 3qvp_A Glucose oxidase; oxidor 99.1 1.7E-10 5.7E-15 117.3 11.3 57 178-244 233-294 (583)
80 3nrn_A Uncharacterized protein 99.1 5E-10 1.7E-14 109.0 13.9 39 93-132 2-40 (421)
81 1dxl_A Dihydrolipoamide dehydr 99.1 3.3E-11 1.1E-15 119.3 5.6 136 91-243 6-151 (470)
82 4a5l_A Thioredoxin reductase; 99.1 1.3E-10 4.5E-15 108.1 8.7 118 91-243 4-121 (314)
83 3qfa_A Thioredoxin reductase 1 99.1 2.1E-10 7E-15 115.3 10.7 138 89-243 30-185 (519)
84 4hb9_A Similarities with proba 99.1 7E-10 2.4E-14 106.7 14.0 126 93-243 3-166 (412)
85 2q7v_A Thioredoxin reductase; 99.1 3E-10 1E-14 106.4 10.7 113 91-243 8-123 (325)
86 4b1b_A TRXR, thioredoxin reduc 99.1 1.1E-10 3.9E-15 117.6 8.0 139 90-243 41-197 (542)
87 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 3.3E-10 1.1E-14 107.2 10.7 132 92-241 2-163 (342)
88 2q0l_A TRXR, thioredoxin reduc 99.1 7.1E-10 2.4E-14 103.1 12.7 112 92-243 2-114 (311)
89 3gwf_A Cyclohexanone monooxyge 99.1 5.3E-10 1.8E-14 112.8 12.5 131 90-243 7-147 (540)
90 3k7m_X 6-hydroxy-L-nicotine ox 99.1 4.1E-10 1.4E-14 109.7 11.3 40 92-132 2-41 (431)
91 3cty_A Thioredoxin reductase; 99.1 9.3E-10 3.2E-14 102.8 13.3 111 91-243 16-126 (319)
92 3itj_A Thioredoxin reductase 1 99.1 2.4E-10 8.1E-15 107.1 9.1 118 90-243 21-142 (338)
93 1pn0_A Phenol 2-monooxygenase; 99.1 5.6E-10 1.9E-14 115.4 12.5 104 91-202 8-152 (665)
94 1zk7_A HGII, reductase, mercur 99.1 4.2E-10 1.4E-14 111.3 11.1 50 91-142 4-53 (467)
95 3fbs_A Oxidoreductase; structu 99.1 1.1E-09 3.6E-14 100.8 13.1 110 92-243 3-112 (297)
96 3o0h_A Glutathione reductase; 99.1 4.6E-10 1.6E-14 111.6 10.8 44 90-135 25-68 (484)
97 3l8k_A Dihydrolipoyl dehydroge 99.1 1.1E-10 3.7E-15 115.6 6.0 132 91-242 4-143 (466)
98 2ywl_A Thioredoxin reductase r 99.1 8.5E-10 2.9E-14 94.6 10.7 109 92-243 2-110 (180)
99 3d1c_A Flavin-containing putat 99.0 3.9E-10 1.3E-14 107.3 9.2 127 91-243 4-143 (369)
100 3uox_A Otemo; baeyer-villiger 99.0 2.7E-10 9.3E-15 115.1 8.6 134 90-243 8-147 (545)
101 1vdc_A NTR, NADPH dependent th 99.0 3.8E-10 1.3E-14 105.9 8.6 114 90-243 7-124 (333)
102 3dgz_A Thioredoxin reductase 2 99.0 3.9E-10 1.3E-14 112.3 9.1 137 90-243 5-159 (488)
103 1ojt_A Surface protein; redox- 99.0 1.8E-10 6.3E-15 114.4 6.6 145 91-243 6-160 (482)
104 3urh_A Dihydrolipoyl dehydroge 99.0 7.3E-10 2.5E-14 110.3 10.8 135 91-242 25-169 (491)
105 3dgh_A TRXR-1, thioredoxin red 99.0 5.9E-10 2E-14 110.8 9.5 136 90-243 8-162 (483)
106 1trb_A Thioredoxin reductase; 99.0 1E-09 3.5E-14 102.3 10.0 112 91-243 5-116 (320)
107 3r9u_A Thioredoxin reductase; 99.0 1E-09 3.4E-14 101.8 9.6 111 91-242 4-117 (315)
108 1fec_A Trypanothione reductase 99.0 7.3E-10 2.5E-14 110.4 9.0 52 91-143 3-63 (490)
109 4dna_A Probable glutathione re 99.0 9.8E-11 3.3E-15 115.8 2.7 50 91-142 5-54 (463)
110 2a87_A TRXR, TR, thioredoxin r 99.0 1.1E-09 3.6E-14 103.3 9.6 113 90-243 13-126 (335)
111 3t37_A Probable dehydrogenase; 99.0 1.5E-09 5E-14 108.8 11.1 54 179-243 218-271 (526)
112 3q9t_A Choline dehydrogenase a 99.0 8.8E-10 3E-14 111.9 9.3 51 183-243 217-270 (577)
113 4ap3_A Steroid monooxygenase; 99.0 2E-09 7E-14 108.7 11.8 130 91-243 21-159 (549)
114 1w4x_A Phenylacetone monooxyge 99.0 3.9E-10 1.3E-14 113.8 6.2 131 91-244 16-155 (542)
115 1fl2_A Alkyl hydroperoxide red 99.0 3.6E-09 1.2E-13 98.2 12.3 112 92-243 2-115 (310)
116 2qae_A Lipoamide, dihydrolipoy 99.0 5.3E-10 1.8E-14 110.6 6.4 135 91-242 2-147 (468)
117 4gde_A UDP-galactopyranose mut 99.0 9.2E-10 3.1E-14 109.5 8.0 42 90-131 9-50 (513)
118 1zmd_A Dihydrolipoyl dehydroge 98.9 5.6E-10 1.9E-14 110.6 6.3 135 91-242 6-151 (474)
119 3nks_A Protoporphyrinogen oxid 98.9 3.6E-09 1.2E-13 104.4 11.9 40 92-132 3-44 (477)
120 2xve_A Flavin-containing monoo 98.9 5E-09 1.7E-13 103.7 12.6 140 92-244 3-167 (464)
121 1onf_A GR, grase, glutathione 98.9 1.7E-09 5.8E-14 108.0 9.2 48 91-140 2-49 (500)
122 1v59_A Dihydrolipoamide dehydr 98.9 1.6E-09 5.3E-14 107.5 8.9 132 91-243 5-157 (478)
123 3i6d_A Protoporphyrinogen oxid 98.9 4.7E-09 1.6E-13 103.0 11.9 40 91-131 5-50 (470)
124 2hqm_A GR, grase, glutathione 98.9 5.4E-10 1.8E-14 111.0 5.0 50 90-141 10-59 (479)
125 2eq6_A Pyruvate dehydrogenase 98.9 4.9E-10 1.7E-14 110.9 4.7 130 91-243 6-143 (464)
126 1ebd_A E3BD, dihydrolipoamide 98.9 6.5E-09 2.2E-13 102.4 12.7 132 91-243 3-145 (455)
127 1c0p_A D-amino acid oxidase; a 98.9 2E-09 7E-14 102.5 8.7 38 90-128 5-42 (363)
128 1ges_A Glutathione reductase; 98.9 4.1E-09 1.4E-13 103.8 11.0 50 91-142 4-53 (450)
129 3dk9_A Grase, GR, glutathione 98.9 1.4E-09 4.8E-14 107.9 7.6 52 90-143 19-70 (478)
130 2ivd_A PPO, PPOX, protoporphyr 98.9 6.2E-09 2.1E-13 102.8 11.9 43 88-131 13-55 (478)
131 3g3e_A D-amino-acid oxidase; F 98.9 4.1E-10 1.4E-14 106.8 2.7 46 93-139 2-53 (351)
132 2a8x_A Dihydrolipoyl dehydroge 98.9 4.3E-09 1.5E-13 103.9 9.4 133 91-243 3-146 (464)
133 3kkj_A Amine oxidase, flavin-c 98.9 1.2E-09 4.1E-14 97.0 4.8 40 91-131 2-41 (336)
134 3lad_A Dihydrolipoamide dehydr 98.9 9.7E-10 3.3E-14 108.9 4.6 43 91-134 3-45 (476)
135 1hyu_A AHPF, alkyl hydroperoxi 98.9 1.2E-08 4E-13 102.5 12.3 115 89-243 210-326 (521)
136 1xdi_A RV3303C-LPDA; reductase 98.9 2.9E-09 1E-13 106.2 7.8 49 91-140 2-52 (499)
137 1lvl_A Dihydrolipoamide dehydr 98.8 3.4E-09 1.2E-13 104.6 7.7 129 91-242 5-145 (458)
138 1s3e_A Amine oxidase [flavin-c 98.8 1.8E-08 6.1E-13 100.8 12.9 41 91-132 4-44 (520)
139 2vvm_A Monoamine oxidase N; FA 98.8 3.7E-08 1.3E-12 97.8 15.1 40 91-131 39-78 (495)
140 3ic9_A Dihydrolipoamide dehydr 98.8 4.9E-09 1.7E-13 104.5 8.5 52 91-144 8-59 (492)
141 3c4a_A Probable tryptophan hyd 98.8 9.8E-10 3.4E-14 105.7 3.2 124 93-244 2-144 (381)
142 2yqu_A 2-oxoglutarate dehydrog 98.8 5.1E-09 1.7E-13 103.2 7.5 48 92-140 2-49 (455)
143 1mo9_A ORF3; nucleotide bindin 98.8 1.3E-08 4.3E-13 102.3 10.2 129 90-242 42-185 (523)
144 3p1w_A Rabgdi protein; GDI RAB 98.8 2.6E-08 9.1E-13 98.5 11.6 41 90-131 19-59 (475)
145 2wpf_A Trypanothione reductase 98.8 2.3E-09 7.8E-14 107.0 3.7 51 91-142 7-66 (495)
146 3fim_B ARYL-alcohol oxidase; A 98.8 9E-09 3.1E-13 104.3 8.0 37 91-127 2-38 (566)
147 2r9z_A Glutathione amide reduc 98.8 2E-08 6.9E-13 99.2 10.0 129 91-242 4-141 (463)
148 3pl8_A Pyranose 2-oxidase; sub 98.8 2.7E-08 9.3E-13 101.9 11.1 38 91-129 46-83 (623)
149 3lov_A Protoporphyrinogen oxid 98.7 5.6E-08 1.9E-12 95.8 12.4 40 91-131 4-45 (475)
150 1y56_A Hypothetical protein PH 98.7 2.8E-08 9.6E-13 99.0 10.0 112 90-242 107-218 (493)
151 3ihm_A Styrene monooxygenase A 98.7 1.5E-08 5.1E-13 99.2 7.0 34 91-125 22-55 (430)
152 3kd9_A Coenzyme A disulfide re 98.7 1.7E-08 5.9E-13 99.2 6.9 109 92-242 4-113 (449)
153 3lxd_A FAD-dependent pyridine 98.7 1.5E-07 5.1E-12 91.4 13.4 138 92-298 153-290 (415)
154 3iwa_A FAD-dependent pyridine 98.7 3.2E-08 1.1E-12 97.9 8.6 120 92-242 4-124 (472)
155 4gut_A Lysine-specific histone 98.7 6.5E-08 2.2E-12 101.4 11.3 38 91-129 336-373 (776)
156 2x8g_A Thioredoxin glutathione 98.7 4.6E-08 1.6E-12 99.7 9.8 35 89-124 105-139 (598)
157 2gag_A Heterotetrameric sarcos 98.7 8.7E-08 3E-12 102.9 12.4 125 90-242 127-252 (965)
158 3lxd_A FAD-dependent pyridine 98.7 4.9E-08 1.7E-12 94.9 9.5 109 90-242 8-118 (415)
159 4eqs_A Coenzyme A disulfide re 98.7 4.1E-08 1.4E-12 96.4 8.8 112 93-242 2-115 (437)
160 2jbv_A Choline oxidase; alcoho 98.7 7E-08 2.4E-12 97.4 10.5 58 176-242 213-272 (546)
161 4b63_A L-ornithine N5 monooxyg 98.7 1.4E-07 4.9E-12 94.1 12.7 139 91-242 39-213 (501)
162 3oc4_A Oxidoreductase, pyridin 98.6 7.9E-08 2.7E-12 94.6 9.0 112 92-243 3-115 (452)
163 1ju2_A HydroxynitrIle lyase; f 98.6 1.5E-07 5.1E-12 94.8 10.8 36 90-127 25-60 (536)
164 1q1r_A Putidaredoxin reductase 98.6 1.4E-07 4.8E-12 92.3 10.4 109 91-243 4-114 (431)
165 3cgb_A Pyridine nucleotide-dis 98.6 1.6E-07 5.5E-12 93.1 9.6 114 92-242 37-151 (480)
166 1gpe_A Protein (glucose oxidas 98.6 3.1E-07 1.1E-11 93.5 11.7 37 90-126 23-59 (587)
167 2bc0_A NADH oxidase; flavoprot 98.5 1.7E-07 5.7E-12 93.2 9.4 111 91-242 35-148 (490)
168 2v3a_A Rubredoxin reductase; a 98.5 1.2E-07 4.2E-12 91.1 8.0 107 91-242 4-112 (384)
169 3klj_A NAD(FAD)-dependent dehy 98.5 1.5E-07 5.2E-12 90.8 8.7 108 90-242 8-115 (385)
170 1kdg_A CDH, cellobiose dehydro 98.5 8.5E-08 2.9E-12 96.7 7.0 60 175-243 199-261 (546)
171 3fg2_P Putative rubredoxin red 98.5 6.2E-07 2.1E-11 86.8 12.8 138 92-298 143-280 (404)
172 1xhc_A NADH oxidase /nitrite r 98.5 2.1E-07 7.2E-12 89.1 9.2 104 91-242 8-112 (367)
173 2vdc_G Glutamate synthase [NAD 98.5 5.4E-08 1.9E-12 96.1 5.2 39 90-129 121-159 (456)
174 3ics_A Coenzyme A-disulfide re 98.5 1.9E-07 6.6E-12 94.9 9.4 115 91-242 36-151 (588)
175 4g6h_A Rotenone-insensitive NA 98.5 3E-07 1E-11 91.8 10.2 34 92-126 43-76 (502)
176 2cdu_A NADPH oxidase; flavoenz 98.5 4E-07 1.4E-11 89.5 10.3 113 92-242 1-116 (452)
177 3g5s_A Methylenetetrahydrofola 98.5 8.8E-07 3E-11 85.0 12.0 105 92-198 2-124 (443)
178 3h8l_A NADH oxidase; membrane 98.5 4.4E-07 1.5E-11 87.8 9.5 109 92-243 2-113 (409)
179 1trb_A Thioredoxin reductase; 98.5 1.9E-06 6.3E-11 80.0 13.4 171 92-330 146-317 (320)
180 1nhp_A NADH peroxidase; oxidor 98.4 8.1E-07 2.8E-11 87.1 11.1 98 91-243 149-246 (447)
181 2gqw_A Ferredoxin reductase; f 98.4 4.1E-07 1.4E-11 88.3 8.8 104 91-242 7-112 (408)
182 3ntd_A FAD-dependent pyridine 98.4 1.3E-07 4.4E-12 95.5 5.3 114 92-242 2-116 (565)
183 3k30_A Histamine dehydrogenase 98.4 2.4E-07 8.3E-12 96.0 7.4 41 90-131 390-430 (690)
184 2v3a_A Rubredoxin reductase; a 98.4 2.1E-06 7.1E-11 82.4 13.2 135 92-296 146-280 (384)
185 3ef6_A Toluene 1,2-dioxygenase 98.4 2.8E-07 9.4E-12 89.5 7.1 106 92-242 3-110 (410)
186 1nhp_A NADH peroxidase; oxidor 98.4 4.4E-07 1.5E-11 89.0 8.4 112 93-242 2-114 (447)
187 3fg2_P Putative rubredoxin red 98.4 5.5E-07 1.9E-11 87.1 9.0 106 92-242 2-109 (404)
188 2cdu_A NADPH oxidase; flavoenz 98.4 1.6E-06 5.5E-11 85.1 12.2 98 92-243 150-247 (452)
189 1q1r_A Putidaredoxin reductase 98.4 1.2E-06 4.3E-11 85.5 11.3 138 92-298 150-289 (431)
190 2bcg_G Secretory pathway GDP d 98.4 1.9E-07 6.5E-12 92.0 5.2 41 90-131 10-50 (453)
191 3h28_A Sulfide-quinone reducta 98.4 3.1E-07 1.1E-11 89.6 6.3 104 92-242 3-108 (430)
192 2jae_A L-amino acid oxidase; o 98.4 6.2E-07 2.1E-11 88.7 8.0 42 90-132 10-51 (489)
193 3sx6_A Sulfide-quinone reducta 98.4 5.1E-07 1.8E-11 88.3 7.2 105 92-243 5-112 (437)
194 2yg5_A Putrescine oxidase; oxi 98.4 4.8E-07 1.6E-11 88.5 6.9 66 91-157 5-78 (453)
195 1ps9_A 2,4-dienoyl-COA reducta 98.4 3.6E-07 1.2E-11 94.4 6.3 39 91-130 373-411 (671)
196 1fl2_A Alkyl hydroperoxide red 98.3 3.6E-06 1.2E-10 77.7 12.3 97 92-242 145-241 (310)
197 2yqu_A 2-oxoglutarate dehydrog 98.3 2.8E-06 9.6E-11 83.4 12.0 97 92-243 168-264 (455)
198 2bc0_A NADH oxidase; flavoprot 98.3 2.3E-06 7.8E-11 85.0 11.2 97 92-243 195-291 (490)
199 2eq6_A Pyruvate dehydrogenase 98.3 3.8E-06 1.3E-10 82.8 12.7 102 92-243 170-271 (464)
200 3itj_A Thioredoxin reductase 1 98.3 3.1E-06 1.1E-10 78.8 11.5 164 91-328 173-336 (338)
201 3oc4_A Oxidoreductase, pyridin 98.3 3.5E-06 1.2E-10 82.7 12.3 97 92-243 148-244 (452)
202 2q0l_A TRXR, thioredoxin reduc 98.3 5.7E-06 2E-10 76.4 13.0 97 92-242 144-240 (311)
203 3hyw_A Sulfide-quinone reducta 98.3 2.9E-07 9.9E-12 90.0 4.2 104 93-242 4-108 (430)
204 1ges_A Glutathione reductase; 98.3 2.8E-06 9.6E-11 83.4 10.9 98 92-243 168-265 (450)
205 2b9w_A Putative aminooxidase; 98.3 5.5E-07 1.9E-11 87.3 5.6 41 90-131 5-46 (424)
206 1v59_A Dihydrolipoamide dehydr 98.3 4.3E-06 1.5E-10 82.6 12.2 103 92-243 184-287 (478)
207 1rsg_A FMS1 protein; FAD bindi 98.3 3.5E-07 1.2E-11 91.4 4.3 41 90-131 7-48 (516)
208 1vdc_A NTR, NADPH dependent th 98.3 6.2E-06 2.1E-10 76.9 12.5 98 92-243 160-259 (333)
209 1cjc_A Protein (adrenodoxin re 98.3 3.3E-07 1.1E-11 90.5 3.8 38 91-129 6-45 (460)
210 1gte_A Dihydropyrimidine dehyd 98.3 4E-07 1.4E-11 98.4 4.7 39 91-130 187-226 (1025)
211 3ntd_A FAD-dependent pyridine 98.3 4.4E-06 1.5E-10 84.2 12.1 138 92-298 152-308 (565)
212 2gqw_A Ferredoxin reductase; f 98.3 4.7E-06 1.6E-10 80.7 11.8 133 92-298 146-278 (408)
213 3ef6_A Toluene 1,2-dioxygenase 98.3 1.2E-06 4.1E-11 85.0 7.5 98 92-243 144-241 (410)
214 1ebd_A E3BD, dihydrolipoamide 98.3 6.9E-06 2.4E-10 80.6 13.0 101 91-243 170-270 (455)
215 3cgb_A Pyridine nucleotide-dis 98.3 4.9E-06 1.7E-10 82.4 11.7 97 91-243 186-282 (480)
216 3r9u_A Thioredoxin reductase; 98.3 5.9E-06 2E-10 76.1 11.5 97 92-243 148-244 (315)
217 2r9z_A Glutathione amide reduc 98.2 7.7E-06 2.6E-10 80.6 12.6 97 92-243 167-264 (463)
218 1v0j_A UDP-galactopyranose mut 98.2 5.9E-07 2E-11 87.0 4.5 42 91-132 7-48 (399)
219 2q7v_A Thioredoxin reductase; 98.2 9.6E-06 3.3E-10 75.5 12.7 96 92-242 153-248 (325)
220 3f8d_A Thioredoxin reductase ( 98.2 9.8E-06 3.4E-10 74.7 12.6 164 91-327 154-317 (323)
221 1zmd_A Dihydrolipoyl dehydroge 98.2 5.3E-06 1.8E-10 81.9 11.1 103 92-243 179-282 (474)
222 3kd9_A Coenzyme A disulfide re 98.2 7.2E-06 2.5E-10 80.3 11.8 137 92-298 149-285 (449)
223 3cty_A Thioredoxin reductase; 98.2 6.3E-06 2.1E-10 76.5 10.4 96 92-242 156-251 (319)
224 1m6i_A Programmed cell death p 98.2 6.7E-07 2.3E-11 89.0 3.9 39 90-128 10-49 (493)
225 1onf_A GR, grase, glutathione 98.2 6.6E-06 2.3E-10 81.9 11.1 99 91-243 176-275 (500)
226 2hqm_A GR, grase, glutathione 98.2 7.1E-06 2.4E-10 81.2 11.0 98 92-243 186-285 (479)
227 1lqt_A FPRA; NADP+ derivative, 98.2 6.5E-07 2.2E-11 88.3 3.4 39 91-129 3-47 (456)
228 3hdq_A UDP-galactopyranose mut 98.2 1.1E-06 3.9E-11 85.0 5.1 42 90-132 28-69 (397)
229 2zbw_A Thioredoxin reductase; 98.2 1.8E-05 6E-10 73.8 13.0 168 92-330 153-320 (335)
230 3ab1_A Ferredoxin--NADP reduct 98.2 8.5E-06 2.9E-10 77.0 11.0 168 92-330 164-331 (360)
231 3vrd_B FCCB subunit, flavocyto 98.2 2E-06 6.9E-11 82.8 6.5 103 93-242 4-107 (401)
232 1zk7_A HGII, reductase, mercur 98.2 9.7E-06 3.3E-10 79.8 11.4 95 92-243 177-271 (467)
233 2a8x_A Dihydrolipoyl dehydroge 98.2 9.7E-06 3.3E-10 79.7 11.4 100 92-243 172-271 (464)
234 2e1m_A L-glutamate oxidase; L- 98.2 1.5E-06 5.3E-11 83.4 5.3 42 90-132 43-85 (376)
235 1ojt_A Surface protein; redox- 98.1 7.6E-06 2.6E-10 81.0 10.5 101 92-243 186-286 (482)
236 1i8t_A UDP-galactopyranose mut 98.1 1.4E-06 4.7E-11 83.5 4.6 40 92-132 2-41 (367)
237 1xdi_A RV3303C-LPDA; reductase 98.1 1.2E-05 4.1E-10 80.0 11.4 97 92-243 183-279 (499)
238 3urh_A Dihydrolipoyl dehydroge 98.1 2.3E-05 7.8E-10 77.7 13.2 102 92-243 199-300 (491)
239 1m6i_A Programmed cell death p 98.1 2E-05 6.8E-10 78.3 12.4 98 92-243 181-282 (493)
240 4dsg_A UDP-galactopyranose mut 98.1 2.2E-06 7.4E-11 85.1 5.3 43 89-132 7-50 (484)
241 3ic9_A Dihydrolipoamide dehydr 98.1 2.7E-05 9.2E-10 77.3 13.2 100 92-243 175-274 (492)
242 3iwa_A FAD-dependent pyridine 98.1 1.2E-05 4.1E-10 79.3 10.5 141 92-299 160-300 (472)
243 3ics_A Coenzyme A-disulfide re 98.1 1.7E-05 5.9E-10 80.4 11.8 136 92-298 188-323 (588)
244 1sez_A Protoporphyrinogen oxid 98.1 2.5E-06 8.5E-11 84.6 5.5 40 91-131 13-52 (504)
245 4b1b_A TRXR, thioredoxin reduc 98.1 1.7E-05 6E-10 79.7 11.7 96 92-243 224-319 (542)
246 1mo9_A ORF3; nucleotide bindin 98.1 1.9E-05 6.5E-10 79.1 11.7 98 92-243 215-316 (523)
247 2qae_A Lipoamide, dihydrolipoy 98.1 2E-05 6.9E-10 77.5 11.7 102 92-243 175-276 (468)
248 3lad_A Dihydrolipoamide dehydr 98.1 2.3E-05 7.8E-10 77.3 12.1 99 92-242 181-279 (476)
249 1dxl_A Dihydrolipoamide dehydr 98.1 9.8E-06 3.4E-10 79.8 9.3 102 92-243 178-279 (470)
250 1hyu_A AHPF, alkyl hydroperoxi 98.1 1.8E-05 6.2E-10 79.2 11.2 97 92-242 356-452 (521)
251 2bi7_A UDP-galactopyranose mut 98.1 3.1E-06 1.1E-10 81.5 5.4 41 91-132 3-43 (384)
252 3klj_A NAD(FAD)-dependent dehy 98.1 5.5E-06 1.9E-10 79.8 7.1 84 92-242 147-230 (385)
253 1xhc_A NADH oxidase /nitrite r 98.1 6.8E-06 2.3E-10 78.5 7.7 129 92-297 144-272 (367)
254 2a87_A TRXR, TR, thioredoxin r 98.0 1.3E-05 4.4E-10 75.0 9.2 98 91-243 155-252 (335)
255 1lvl_A Dihydrolipoamide dehydr 98.0 9.5E-06 3.2E-10 79.8 8.6 97 92-243 172-268 (458)
256 1d5t_A Guanine nucleotide diss 98.0 4.3E-06 1.5E-10 81.8 5.7 40 91-131 6-45 (433)
257 1fec_A Trypanothione reductase 98.0 2.3E-05 7.7E-10 77.8 11.0 99 92-243 188-288 (490)
258 4dna_A Probable glutathione re 98.0 2.2E-05 7.5E-10 77.2 10.8 98 91-243 170-268 (463)
259 2wpf_A Trypanothione reductase 98.0 2.2E-05 7.6E-10 78.0 10.9 99 92-243 192-292 (495)
260 3dgh_A TRXR-1, thioredoxin red 98.0 3.9E-05 1.3E-09 75.9 11.9 102 92-243 188-289 (483)
261 3s5w_A L-ornithine 5-monooxyge 98.0 7.3E-05 2.5E-09 73.2 13.5 140 91-243 227-377 (463)
262 4a5l_A Thioredoxin reductase; 97.9 7.9E-05 2.7E-09 68.6 12.4 97 92-242 153-249 (314)
263 3dk9_A Grase, GR, glutathione 97.9 6.3E-05 2.2E-09 74.2 12.4 103 92-243 188-293 (478)
264 2iid_A L-amino-acid oxidase; f 97.9 6E-06 2E-10 81.8 4.6 40 91-131 33-72 (498)
265 3dgz_A Thioredoxin reductase 2 97.9 6.2E-05 2.1E-09 74.5 11.9 100 92-242 186-286 (488)
266 3lzw_A Ferredoxin--NADP reduct 97.9 5.4E-05 1.8E-09 70.1 10.1 163 92-329 155-317 (332)
267 4g6h_A Rotenone-insensitive NA 97.8 6.2E-05 2.1E-09 75.0 10.5 100 93-243 219-332 (502)
268 1b37_A Protein (polyamine oxid 97.8 1.1E-05 3.7E-10 79.5 4.7 40 91-131 4-44 (472)
269 4eqs_A Coenzyme A disulfide re 97.8 7.5E-05 2.6E-09 73.0 10.0 92 92-242 148-239 (437)
270 3qfa_A Thioredoxin reductase 1 97.7 0.00031 1E-08 70.2 13.6 100 92-242 211-314 (519)
271 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00017 6E-09 70.8 11.6 99 92-243 173-272 (466)
272 3d1c_A Flavin-containing putat 97.7 0.00016 5.6E-09 68.1 10.4 104 92-243 167-272 (369)
273 1o94_A Tmadh, trimethylamine d 97.6 3.6E-05 1.2E-09 80.2 5.5 41 90-131 388-428 (729)
274 2xag_A Lysine-specific histone 97.6 8.3E-05 2.8E-09 78.5 8.2 40 91-131 278-317 (852)
275 2z3y_A Lysine-specific histone 97.6 3.9E-05 1.3E-09 79.1 5.1 39 91-130 107-145 (662)
276 4gcm_A TRXR, thioredoxin reduc 97.6 0.00076 2.6E-08 62.1 13.3 97 92-242 146-242 (312)
277 2x8g_A Thioredoxin glutathione 97.6 0.00059 2E-08 69.2 13.7 99 92-242 287-394 (598)
278 3k30_A Histamine dehydrogenase 97.6 6E-05 2E-09 78.0 5.9 98 92-242 524-623 (690)
279 3fbs_A Oxidoreductase; structu 97.5 0.00014 4.6E-09 66.2 7.1 152 91-328 141-293 (297)
280 2gag_A Heterotetrameric sarcos 97.5 0.0002 6.8E-09 76.9 8.4 162 92-330 285-447 (965)
281 1gte_A Dihydropyrimidine dehyd 97.4 0.00059 2E-08 73.7 11.6 105 92-242 333-441 (1025)
282 1cjc_A Protein (adrenodoxin re 97.4 0.0011 3.6E-08 65.3 12.2 59 185-243 270-333 (460)
283 2vdc_G Glutamate synthase [NAD 97.4 0.00024 8.1E-09 69.9 7.2 173 91-327 264-444 (456)
284 1n4w_A CHOD, cholesterol oxida 97.4 0.00013 4.3E-09 72.7 5.0 36 91-127 5-40 (504)
285 1vg0_A RAB proteins geranylger 97.4 0.00014 4.8E-09 74.3 5.3 40 91-131 8-47 (650)
286 1coy_A Cholesterol oxidase; ox 97.3 0.00016 5.4E-09 72.1 4.6 36 89-125 9-44 (507)
287 1lqt_A FPRA; NADP+ derivative, 97.1 0.0019 6.6E-08 63.3 10.0 35 92-126 148-202 (456)
288 3gwf_A Cyclohexanone monooxyge 97.1 0.0013 4.5E-08 66.0 8.9 35 91-126 178-212 (540)
289 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.0025 8.6E-08 65.6 11.2 29 91-120 494-522 (671)
290 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00018 6.2E-09 74.3 2.2 35 92-127 57-100 (721)
291 1o94_A Tmadh, trimethylamine d 97.0 0.00083 2.8E-08 69.9 6.5 33 92-125 529-563 (729)
292 3uox_A Otemo; baeyer-villiger 97.0 0.0044 1.5E-07 62.2 11.6 35 91-126 185-219 (545)
293 2xve_A Flavin-containing monoo 96.9 0.0018 6.2E-08 63.6 8.2 35 92-127 198-232 (464)
294 4fk1_A Putative thioredoxin re 96.9 0.002 6.8E-08 59.2 7.8 90 92-244 147-237 (304)
295 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0036 1.2E-07 60.9 7.3 34 91-125 212-246 (447)
296 4ap3_A Steroid monooxygenase; 96.5 0.01 3.4E-07 59.6 9.8 35 91-126 191-225 (549)
297 3sx6_A Sulfide-quinone reducta 96.5 0.013 4.5E-07 56.7 10.4 176 93-329 151-346 (437)
298 3hyw_A Sulfide-quinone reducta 96.2 0.035 1.2E-06 53.6 11.7 125 178-329 206-335 (430)
299 4a9w_A Monooxygenase; baeyer-v 96.0 0.0041 1.4E-07 57.7 3.7 32 92-125 164-195 (357)
300 3h28_A Sulfide-quinone reducta 95.9 0.0095 3.2E-07 57.6 6.1 121 180-329 208-335 (430)
301 3h8l_A NADH oxidase; membrane 95.8 0.023 7.9E-07 54.3 8.4 114 175-328 222-337 (409)
302 2g1u_A Hypothetical protein TM 94.8 0.027 9.3E-07 46.2 4.7 33 92-125 20-52 (155)
303 3llv_A Exopolyphosphatase-rela 94.8 0.027 9.3E-07 45.2 4.5 33 92-125 7-39 (141)
304 1w4x_A Phenylacetone monooxyge 94.7 0.18 6.3E-06 50.1 11.3 35 91-126 186-220 (542)
305 3fwz_A Inner membrane protein 94.7 0.036 1.2E-06 44.8 5.0 33 92-125 8-40 (140)
306 4b63_A L-ornithine N5 monooxyg 94.6 0.12 4.1E-06 51.0 9.4 34 92-125 247-281 (501)
307 1lss_A TRK system potassium up 94.5 0.038 1.3E-06 43.9 4.7 33 92-125 5-37 (140)
308 1id1_A Putative potassium chan 94.4 0.046 1.6E-06 44.6 5.0 32 92-124 4-35 (153)
309 3ic5_A Putative saccharopine d 93.8 0.066 2.3E-06 41.0 4.5 33 92-125 6-39 (118)
310 2hmt_A YUAA protein; RCK, KTN, 93.8 0.055 1.9E-06 43.1 4.2 33 92-125 7-39 (144)
311 3lk7_A UDP-N-acetylmuramoylala 92.5 0.11 3.7E-06 50.6 4.9 34 91-125 9-42 (451)
312 2bcg_G Secretory pathway GDP d 92.5 0.21 7.3E-06 48.4 6.9 58 170-243 241-300 (453)
313 1pzg_A LDH, lactate dehydrogen 92.2 0.12 4E-06 48.4 4.4 33 92-125 10-43 (331)
314 3dfz_A SIRC, precorrin-2 dehyd 92.2 0.12 4.2E-06 45.4 4.3 34 90-124 30-63 (223)
315 1d5t_A Guanine nucleotide diss 92.0 0.14 4.9E-06 49.4 5.0 58 170-243 233-290 (433)
316 3ado_A Lambda-crystallin; L-gu 91.8 0.12 3.9E-06 48.2 3.9 33 92-125 7-39 (319)
317 3l4b_C TRKA K+ channel protien 91.7 0.12 3.9E-06 44.9 3.6 32 93-125 2-33 (218)
318 3o0h_A Glutathione reductase; 91.2 0.25 8.7E-06 48.2 5.9 97 92-243 192-288 (484)
319 1kyq_A Met8P, siroheme biosynt 91.2 0.14 4.9E-06 46.5 3.8 34 91-125 13-46 (274)
320 3i83_A 2-dehydropantoate 2-red 90.5 0.22 7.5E-06 46.0 4.5 33 92-125 3-35 (320)
321 4dio_A NAD(P) transhydrogenase 90.4 0.24 8.3E-06 47.5 4.7 34 91-125 190-223 (405)
322 1jw9_B Molybdopterin biosynthe 90.3 0.19 6.5E-06 44.9 3.7 33 92-125 32-65 (249)
323 4e12_A Diketoreductase; oxidor 90.0 0.27 9.3E-06 44.5 4.6 33 92-125 5-37 (283)
324 2dpo_A L-gulonate 3-dehydrogen 89.9 0.23 7.7E-06 46.1 3.9 33 92-125 7-39 (319)
325 1y56_A Hypothetical protein PH 89.8 0.39 1.3E-05 47.2 5.9 55 184-258 269-323 (493)
326 1f0y_A HCDH, L-3-hydroxyacyl-C 89.8 0.27 9.1E-06 44.9 4.4 32 93-125 17-48 (302)
327 3oj0_A Glutr, glutamyl-tRNA re 89.7 0.2 6.8E-06 40.3 3.1 33 92-125 22-54 (144)
328 3hn2_A 2-dehydropantoate 2-red 89.6 0.24 8.1E-06 45.6 3.9 33 92-125 3-35 (312)
329 2a9f_A Putative malic enzyme ( 89.6 0.25 8.7E-06 47.0 4.1 35 90-125 187-222 (398)
330 1n4w_A CHOD, cholesterol oxida 89.5 0.47 1.6E-05 46.7 6.2 59 178-243 228-288 (504)
331 1coy_A Cholesterol oxidase; ox 89.4 0.58 2E-05 46.1 6.8 59 178-243 233-293 (507)
332 2hjr_A Malate dehydrogenase; m 89.4 0.33 1.1E-05 45.2 4.7 33 92-125 15-48 (328)
333 1pjc_A Protein (L-alanine dehy 89.3 0.33 1.1E-05 45.7 4.7 33 92-125 168-200 (361)
334 3ghy_A Ketopantoate reductase 89.2 0.33 1.1E-05 45.1 4.6 32 92-124 4-35 (335)
335 3p2y_A Alanine dehydrogenase/p 89.0 0.27 9.4E-06 46.7 3.9 34 91-125 184-217 (381)
336 3c85_A Putative glutathione-re 89.0 0.23 7.8E-06 41.6 3.0 34 92-125 40-73 (183)
337 2x5o_A UDP-N-acetylmuramoylala 88.9 0.26 9E-06 47.7 3.8 35 92-127 6-40 (439)
338 4g65_A TRK system potassium up 88.9 0.26 8.8E-06 48.2 3.7 32 93-125 5-36 (461)
339 1x13_A NAD(P) transhydrogenase 88.9 0.33 1.1E-05 46.5 4.4 34 91-125 172-205 (401)
340 1lld_A L-lactate dehydrogenase 88.7 0.36 1.2E-05 44.3 4.4 33 92-125 8-42 (319)
341 1ks9_A KPA reductase;, 2-dehyd 88.5 0.39 1.3E-05 43.1 4.4 33 93-126 2-34 (291)
342 1l7d_A Nicotinamide nucleotide 88.4 0.38 1.3E-05 45.7 4.5 34 91-125 172-205 (384)
343 3tl2_A Malate dehydrogenase; c 88.3 0.49 1.7E-05 43.8 5.0 32 92-124 9-41 (315)
344 1vl6_A Malate oxidoreductase; 88.2 0.36 1.2E-05 45.9 4.1 36 89-125 190-226 (388)
345 3l9w_A Glutathione-regulated p 88.0 0.42 1.4E-05 46.0 4.5 33 92-125 5-37 (413)
346 3eag_A UDP-N-acetylmuramate:L- 88.0 0.75 2.6E-05 42.5 6.1 34 92-126 5-39 (326)
347 2eez_A Alanine dehydrogenase; 87.9 0.47 1.6E-05 44.8 4.7 34 91-125 166-199 (369)
348 2raf_A Putative dinucleotide-b 87.7 0.5 1.7E-05 40.7 4.5 34 92-126 20-53 (209)
349 1bg6_A N-(1-D-carboxylethyl)-L 87.7 0.46 1.6E-05 44.1 4.5 33 92-125 5-37 (359)
350 3g17_A Similar to 2-dehydropan 87.6 0.31 1.1E-05 44.4 3.2 32 93-125 4-35 (294)
351 3c24_A Putative oxidoreductase 87.6 0.47 1.6E-05 42.8 4.4 32 93-125 13-45 (286)
352 2ew2_A 2-dehydropantoate 2-red 87.6 0.47 1.6E-05 43.0 4.4 32 93-125 5-36 (316)
353 2y0c_A BCEC, UDP-glucose dehyd 87.5 0.47 1.6E-05 46.5 4.6 34 91-125 8-41 (478)
354 1nyt_A Shikimate 5-dehydrogena 87.4 0.5 1.7E-05 42.5 4.4 33 92-125 120-152 (271)
355 2ewd_A Lactate dehydrogenase,; 87.3 0.46 1.6E-05 43.8 4.2 33 92-125 5-38 (317)
356 3k96_A Glycerol-3-phosphate de 87.2 0.52 1.8E-05 44.4 4.5 33 92-125 30-62 (356)
357 4ezb_A Uncharacterized conserv 87.2 0.57 2E-05 43.2 4.8 33 92-125 25-58 (317)
358 2v6b_A L-LDH, L-lactate dehydr 87.1 0.51 1.8E-05 43.3 4.4 32 93-125 2-35 (304)
359 4ffl_A PYLC; amino acid, biosy 87.1 0.57 1.9E-05 43.8 4.8 33 93-126 3-35 (363)
360 1zej_A HBD-9, 3-hydroxyacyl-CO 86.9 0.53 1.8E-05 43.1 4.3 34 90-125 11-44 (293)
361 3ego_A Probable 2-dehydropanto 86.9 0.57 2E-05 42.9 4.6 32 92-125 3-34 (307)
362 2vhw_A Alanine dehydrogenase; 86.8 0.58 2E-05 44.3 4.7 34 91-125 168-201 (377)
363 3gg2_A Sugar dehydrogenase, UD 86.6 0.56 1.9E-05 45.6 4.5 32 93-125 4-35 (450)
364 3vrd_B FCCB subunit, flavocyto 86.5 4.9 0.00017 37.6 11.1 112 182-327 212-324 (401)
365 1zcj_A Peroxisomal bifunctiona 86.2 0.6 2.1E-05 45.6 4.5 32 93-125 39-70 (463)
366 1z82_A Glycerol-3-phosphate de 86.2 0.63 2.2E-05 43.1 4.5 34 91-125 14-47 (335)
367 2aef_A Calcium-gated potassium 86.1 0.4 1.4E-05 41.8 2.9 32 92-125 10-41 (234)
368 1t2d_A LDH-P, L-lactate dehydr 85.9 0.75 2.6E-05 42.6 4.8 33 92-125 5-38 (322)
369 3l6d_A Putative oxidoreductase 85.8 0.73 2.5E-05 42.2 4.7 33 92-125 10-42 (306)
370 4a7p_A UDP-glucose dehydrogena 85.8 0.73 2.5E-05 44.8 4.8 35 91-126 8-42 (446)
371 3k6j_A Protein F01G10.3, confi 85.8 0.58 2E-05 45.7 4.1 34 92-126 55-88 (460)
372 3d0o_A L-LDH 1, L-lactate dehy 85.8 0.58 2E-05 43.2 4.0 32 92-124 7-40 (317)
373 3orq_A N5-carboxyaminoimidazol 85.7 1.6 5.5E-05 41.1 7.2 34 92-126 13-46 (377)
374 3ond_A Adenosylhomocysteinase; 85.7 0.59 2E-05 45.8 4.1 34 91-125 265-298 (488)
375 3phh_A Shikimate dehydrogenase 85.5 0.79 2.7E-05 41.4 4.6 35 91-126 118-152 (269)
376 3hwr_A 2-dehydropantoate 2-red 85.4 0.64 2.2E-05 42.8 4.1 32 92-125 20-51 (318)
377 1zud_1 Adenylyltransferase THI 85.4 0.66 2.2E-05 41.3 4.1 34 91-125 28-62 (251)
378 3gvi_A Malate dehydrogenase; N 85.2 0.82 2.8E-05 42.4 4.7 33 92-125 8-41 (324)
379 2egg_A AROE, shikimate 5-dehyd 85.2 0.78 2.7E-05 41.9 4.5 34 91-125 141-175 (297)
380 1y6j_A L-lactate dehydrogenase 84.6 0.89 3E-05 42.0 4.7 33 92-125 8-42 (318)
381 1pjq_A CYSG, siroheme synthase 84.5 0.72 2.5E-05 44.9 4.2 34 91-125 12-45 (457)
382 1jay_A Coenzyme F420H2:NADP+ o 84.5 1 3.5E-05 38.3 4.8 32 93-125 2-34 (212)
383 1p77_A Shikimate 5-dehydrogena 84.5 0.66 2.3E-05 41.8 3.6 33 92-125 120-152 (272)
384 3tnl_A Shikimate dehydrogenase 84.4 0.95 3.3E-05 41.8 4.7 33 91-124 154-187 (315)
385 1nvt_A Shikimate 5'-dehydrogen 84.2 0.85 2.9E-05 41.3 4.3 31 92-124 129-159 (287)
386 3p7m_A Malate dehydrogenase; p 84.2 1 3.4E-05 41.8 4.8 33 92-125 6-39 (321)
387 3dtt_A NADP oxidoreductase; st 84.1 1.1 3.6E-05 39.6 4.8 33 92-125 20-52 (245)
388 1ur5_A Malate dehydrogenase; o 84.0 0.96 3.3E-05 41.6 4.6 33 92-125 3-36 (309)
389 1mv8_A GMD, GDP-mannose 6-dehy 83.9 0.73 2.5E-05 44.5 3.9 32 93-125 2-33 (436)
390 3rui_A Ubiquitin-like modifier 83.9 0.96 3.3E-05 42.3 4.5 34 91-125 34-68 (340)
391 4huj_A Uncharacterized protein 83.9 0.5 1.7E-05 41.0 2.5 33 92-125 24-57 (220)
392 2vns_A Metalloreductase steap3 83.8 1.1 3.6E-05 38.8 4.6 33 92-125 29-61 (215)
393 4dll_A 2-hydroxy-3-oxopropiona 83.8 0.8 2.7E-05 42.2 4.0 33 92-125 32-64 (320)
394 3g0o_A 3-hydroxyisobutyrate de 83.8 0.88 3E-05 41.5 4.2 33 92-125 8-40 (303)
395 3h8v_A Ubiquitin-like modifier 83.7 0.78 2.7E-05 42.0 3.8 34 91-125 36-70 (292)
396 3jyo_A Quinate/shikimate dehyd 83.6 0.98 3.4E-05 41.0 4.4 34 91-125 127-161 (283)
397 3pef_A 6-phosphogluconate dehy 83.6 0.97 3.3E-05 40.7 4.4 33 93-126 3-35 (287)
398 3qha_A Putative oxidoreductase 83.5 0.92 3.2E-05 41.2 4.3 34 92-126 16-49 (296)
399 3gpi_A NAD-dependent epimerase 83.5 1.3 4.3E-05 39.5 5.1 33 93-126 5-37 (286)
400 1ldn_A L-lactate dehydrogenase 83.4 0.93 3.2E-05 41.8 4.2 33 92-125 7-41 (316)
401 3doj_A AT3G25530, dehydrogenas 83.3 0.99 3.4E-05 41.3 4.4 34 92-126 22-55 (310)
402 3vtf_A UDP-glucose 6-dehydroge 83.3 0.84 2.9E-05 44.3 4.0 33 92-125 22-54 (444)
403 3g79_A NDP-N-acetyl-D-galactos 83.3 0.89 3E-05 44.6 4.2 35 92-126 19-54 (478)
404 3vku_A L-LDH, L-lactate dehydr 83.3 0.88 3E-05 42.3 4.0 32 92-124 10-43 (326)
405 1txg_A Glycerol-3-phosphate de 83.2 0.81 2.8E-05 42.0 3.8 30 93-123 2-31 (335)
406 1guz_A Malate dehydrogenase; o 83.1 1.1 3.6E-05 41.2 4.5 33 93-125 2-35 (310)
407 3pqe_A L-LDH, L-lactate dehydr 83.0 0.96 3.3E-05 42.0 4.1 33 92-125 6-40 (326)
408 3don_A Shikimate dehydrogenase 82.9 0.93 3.2E-05 41.1 3.9 34 91-125 117-151 (277)
409 1evy_A Glycerol-3-phosphate de 82.8 0.92 3.2E-05 42.4 4.1 32 93-125 17-48 (366)
410 1vg0_A RAB proteins geranylger 82.8 2.6 8.8E-05 42.9 7.5 56 170-240 377-434 (650)
411 3u62_A Shikimate dehydrogenase 82.7 1.2 4.1E-05 39.7 4.6 32 93-125 110-142 (253)
412 3mog_A Probable 3-hydroxybutyr 82.7 1.1 3.7E-05 44.0 4.6 33 92-125 6-38 (483)
413 1a5z_A L-lactate dehydrogenase 82.6 0.86 2.9E-05 42.0 3.7 32 93-125 2-35 (319)
414 3e8x_A Putative NAD-dependent 82.6 1.3 4.6E-05 38.2 4.8 33 92-125 22-55 (236)
415 3o38_A Short chain dehydrogena 82.6 1 3.4E-05 39.9 4.0 33 92-125 23-57 (266)
416 3d4o_A Dipicolinate synthase s 82.6 1.2 4.2E-05 40.4 4.7 34 91-125 155-188 (293)
417 2uyy_A N-PAC protein; long-cha 82.5 1.4 4.6E-05 40.3 5.0 33 92-125 31-63 (316)
418 3ggo_A Prephenate dehydrogenas 82.4 1.2 4.2E-05 40.9 4.6 33 92-125 34-68 (314)
419 1lu9_A Methylene tetrahydromet 82.3 1.3 4.3E-05 40.1 4.6 32 92-124 120-152 (287)
420 2rir_A Dipicolinate synthase, 82.3 1.3 4.4E-05 40.4 4.7 34 91-125 157-190 (300)
421 3ew7_A LMO0794 protein; Q8Y8U8 82.2 1.4 4.9E-05 37.2 4.7 32 93-125 2-34 (221)
422 3t4e_A Quinate/shikimate dehyd 82.2 1.4 4.8E-05 40.6 4.9 33 91-124 148-181 (312)
423 3fbt_A Chorismate mutase and s 82.0 1.2 4.1E-05 40.5 4.3 34 91-125 122-156 (282)
424 1b37_A Protein (polyamine oxid 82.0 1.5 5E-05 42.4 5.3 40 186-240 228-267 (472)
425 3o8q_A Shikimate 5-dehydrogena 82.0 1.5 5.3E-05 39.7 5.0 34 91-125 126-160 (281)
426 4gx0_A TRKA domain protein; me 81.9 1.2 4.2E-05 44.3 4.8 35 92-127 349-383 (565)
427 3ius_A Uncharacterized conserv 81.8 1.4 4.8E-05 39.2 4.7 32 93-125 7-38 (286)
428 1hdo_A Biliverdin IX beta redu 81.8 1.7 5.7E-05 36.3 5.0 32 93-125 5-37 (206)
429 2zyd_A 6-phosphogluconate dehy 81.8 1.2 4.3E-05 43.5 4.7 34 91-125 15-48 (480)
430 4e4t_A Phosphoribosylaminoimid 81.7 1.5 5.1E-05 42.1 5.1 34 91-125 35-68 (419)
431 2dvm_A Malic enzyme, 439AA lon 81.5 1.4 4.9E-05 42.6 4.9 33 91-124 186-225 (439)
432 3ce6_A Adenosylhomocysteinase; 81.5 1.1 3.8E-05 44.1 4.1 34 91-125 274-307 (494)
433 3pwz_A Shikimate dehydrogenase 81.5 1.4 4.9E-05 39.7 4.6 34 91-125 120-154 (272)
434 3h2s_A Putative NADH-flavin re 81.3 1.5 5.2E-05 37.2 4.6 32 93-125 2-34 (224)
435 2f1k_A Prephenate dehydrogenas 81.3 1.3 4.6E-05 39.4 4.4 32 93-125 2-33 (279)
436 3gvp_A Adenosylhomocysteinase 81.3 1.2 4E-05 43.0 4.1 34 91-125 220-253 (435)
437 3k31_A Enoyl-(acyl-carrier-pro 81.3 1.6 5.4E-05 39.5 4.9 33 92-125 31-66 (296)
438 2o3j_A UDP-glucose 6-dehydroge 81.1 1.1 3.7E-05 43.9 4.0 34 92-125 10-44 (481)
439 4eez_A Alcohol dehydrogenase 1 81.1 1.4 4.7E-05 40.7 4.5 34 92-125 165-198 (348)
440 1oju_A MDH, malate dehydrogena 81.0 0.98 3.4E-05 41.3 3.4 32 93-125 2-35 (294)
441 3q2o_A Phosphoribosylaminoimid 80.9 2.3 8E-05 40.0 6.2 33 92-125 15-47 (389)
442 1hyh_A L-hicdh, L-2-hydroxyiso 80.7 1.1 3.8E-05 41.0 3.6 32 93-125 3-36 (309)
443 1y8q_A Ubiquitin-like 1 activa 80.7 1.1 3.9E-05 41.8 3.8 34 91-125 36-70 (346)
444 3c7a_A Octopine dehydrogenase; 80.7 1.1 3.6E-05 42.7 3.7 29 93-122 4-33 (404)
445 1x0v_A GPD-C, GPDH-C, glycerol 80.5 0.83 2.8E-05 42.4 2.8 34 92-126 9-49 (354)
446 2pv7_A T-protein [includes: ch 80.5 1.5 5E-05 39.9 4.4 32 93-125 23-55 (298)
447 2p4q_A 6-phosphogluconate dehy 80.4 1.5 5.1E-05 43.2 4.7 34 91-125 10-43 (497)
448 2i6t_A Ubiquitin-conjugating e 80.4 1.2 4.1E-05 40.9 3.7 33 92-125 15-49 (303)
449 3pdu_A 3-hydroxyisobutyrate de 80.3 0.98 3.4E-05 40.7 3.1 33 93-126 3-35 (287)
450 3vh1_A Ubiquitin-like modifier 80.3 1.5 5.2E-05 44.0 4.7 34 91-125 327-361 (598)
451 2hk9_A Shikimate dehydrogenase 80.2 1.2 4.2E-05 40.0 3.7 33 92-125 130-162 (275)
452 3qsg_A NAD-binding phosphogluc 80.2 1.2 4E-05 40.9 3.6 32 92-124 25-57 (312)
453 3h5n_A MCCB protein; ubiquitin 80.2 1.4 4.6E-05 41.4 4.1 34 91-125 118-152 (353)
454 2h78_A Hibadh, 3-hydroxyisobut 80.1 1.3 4.4E-05 40.1 3.9 32 93-125 5-36 (302)
455 2g5c_A Prephenate dehydrogenas 80.0 1.5 5.3E-05 39.1 4.3 32 93-125 3-36 (281)
456 1b0a_A Protein (fold bifunctio 80.0 2.2 7.6E-05 38.8 5.3 35 90-125 158-193 (288)
457 4e21_A 6-phosphogluconate dehy 80.0 1.6 5.4E-05 41.1 4.5 33 92-125 23-55 (358)
458 2zqz_A L-LDH, L-lactate dehydr 79.8 1.4 4.9E-05 40.8 4.1 33 91-124 9-43 (326)
459 2yg5_A Putrescine oxidase; oxi 79.6 1.5 5E-05 42.0 4.3 42 184-241 224-266 (453)
460 3two_A Mannitol dehydrogenase; 79.5 1.7 5.8E-05 40.2 4.6 33 92-125 178-210 (348)
461 3op4_A 3-oxoacyl-[acyl-carrier 79.4 1.7 5.9E-05 38.1 4.4 33 92-125 10-43 (248)
462 1a4i_A Methylenetetrahydrofola 79.3 2 6.9E-05 39.3 4.8 34 90-124 164-198 (301)
463 1vpd_A Tartronate semialdehyde 79.2 1.4 4.9E-05 39.7 3.9 32 93-125 7-38 (299)
464 2pd4_A Enoyl-[acyl-carrier-pro 79.2 2.2 7.6E-05 37.9 5.1 33 92-125 7-42 (275)
465 3cky_A 2-hydroxymethyl glutara 79.1 1.6 5.3E-05 39.5 4.1 33 92-125 5-37 (301)
466 2wtb_A MFP2, fatty acid multif 79.0 1.5 5.2E-05 45.3 4.4 32 93-125 314-345 (725)
467 4gsl_A Ubiquitin-like modifier 79.0 1.7 5.8E-05 43.8 4.5 35 90-125 325-360 (615)
468 2dkn_A 3-alpha-hydroxysteroid 78.9 2.1 7.1E-05 37.1 4.7 33 93-126 3-36 (255)
469 1edz_A 5,10-methylenetetrahydr 78.9 1.6 5.4E-05 40.4 4.0 34 90-124 176-210 (320)
470 2d5c_A AROE, shikimate 5-dehyd 78.9 1.8 6E-05 38.5 4.3 32 93-125 118-149 (263)
471 4aj2_A L-lactate dehydrogenase 78.9 2 6.7E-05 40.0 4.7 33 92-125 20-54 (331)
472 3ldh_A Lactate dehydrogenase; 78.8 1.4 4.7E-05 41.0 3.7 33 92-125 22-56 (330)
473 3un1_A Probable oxidoreductase 78.8 1.3 4.5E-05 39.2 3.4 34 92-126 29-63 (260)
474 3dhn_A NAD-dependent epimerase 78.8 1.6 5.6E-05 37.2 4.0 33 93-126 6-39 (227)
475 1yqg_A Pyrroline-5-carboxylate 78.8 1.5 5E-05 38.8 3.7 32 93-125 2-34 (263)
476 3nep_X Malate dehydrogenase; h 78.7 1.5 5E-05 40.5 3.8 32 93-125 2-35 (314)
477 2rcy_A Pyrroline carboxylate r 78.6 1.5 5.2E-05 38.7 3.8 34 92-126 5-42 (262)
478 1gpj_A Glutamyl-tRNA reductase 78.6 1.4 4.7E-05 42.1 3.7 34 91-125 167-201 (404)
479 1leh_A Leucine dehydrogenase; 78.6 1.8 6.1E-05 40.8 4.4 34 90-124 172-205 (364)
480 2gf2_A Hibadh, 3-hydroxyisobut 78.6 1.6 5.3E-05 39.3 3.9 32 93-125 2-33 (296)
481 1yqd_A Sinapyl alcohol dehydro 78.4 2 6.8E-05 40.2 4.7 33 92-125 189-221 (366)
482 4dyv_A Short-chain dehydrogena 78.4 1.5 5.2E-05 39.2 3.8 33 92-125 29-62 (272)
483 3fi9_A Malate dehydrogenase; s 78.2 1.9 6.6E-05 40.2 4.5 32 92-124 9-43 (343)
484 1uuf_A YAHK, zinc-type alcohol 78.2 2 7E-05 40.2 4.7 33 92-125 196-228 (369)
485 3ojo_A CAP5O; rossmann fold, c 78.1 1.4 4.9E-05 42.5 3.6 33 92-125 12-44 (431)
486 1npy_A Hypothetical shikimate 77.9 1.6 5.6E-05 39.3 3.8 33 92-125 120-153 (271)
487 3tri_A Pyrroline-5-carboxylate 77.9 2.1 7.1E-05 38.6 4.5 33 92-125 4-39 (280)
488 2izz_A Pyrroline-5-carboxylate 77.9 1.7 5.9E-05 39.9 4.1 33 92-125 23-59 (322)
489 3ppi_A 3-hydroxyacyl-COA dehyd 77.8 2.4 8.4E-05 37.7 5.0 33 92-125 31-64 (281)
490 3v8b_A Putative dehydrogenase, 77.8 2.3 8E-05 38.1 4.8 33 92-125 29-62 (283)
491 3r6d_A NAD-dependent epimerase 77.7 2.4 8E-05 36.1 4.7 32 93-125 7-40 (221)
492 1piw_A Hypothetical zinc-type 77.7 1.8 6.2E-05 40.3 4.2 33 92-125 181-213 (360)
493 1tt5_B Ubiquitin-activating en 77.4 2.1 7.1E-05 41.4 4.6 33 92-125 41-74 (434)
494 1yj8_A Glycerol-3-phosphate de 77.4 1.3 4.5E-05 41.6 3.1 33 93-126 23-62 (375)
495 3d3w_A L-xylulose reductase; u 77.4 2.9 9.9E-05 36.1 5.2 33 92-125 8-41 (244)
496 2b9w_A Putative aminooxidase; 77.4 2.1 7.1E-05 40.5 4.6 50 176-241 207-256 (424)
497 3s2e_A Zinc-containing alcohol 77.4 1.7 6E-05 40.0 3.9 33 92-125 168-200 (340)
498 3ak4_A NADH-dependent quinucli 77.3 2.9 9.8E-05 36.8 5.2 33 92-125 13-46 (263)
499 2pgd_A 6-phosphogluconate dehy 77.2 2.1 7.1E-05 41.9 4.6 33 92-125 3-35 (482)
500 3zwc_A Peroxisomal bifunctiona 77.2 1.8 6.1E-05 44.8 4.3 33 92-125 317-349 (742)
No 1
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=100.00 E-value=1.4e-40 Score=316.25 Aligned_cols=275 Identities=61% Similarity=1.020 Sum_probs=243.9
Q ss_pred CCCcccCCCchhhhhHHHHHhhhhcccccCcccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCccee
Q 018188 61 FNSFTFDPIKESIVSREMTRRYMTDMVTYADTDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFS 139 (359)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~ 139 (359)
.+.|.|.++.+...++.++++|+..+....++||+|||||++|+++|+.|+++ +|++|+|||+...+||++|.++..+.
T Consensus 49 ~~~~~f~~i~~~~isra~~~~~~~~~~~~~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~ 128 (344)
T 3jsk_A 49 TDAFTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFS 128 (344)
T ss_dssp STTCCCCCCCHHHHHHHHHHHHHHHHHHHHBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCC
T ss_pred cCCcCcccccHHHHHHHHHHhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccch
Confidence 37899999999999999999998877666789999999999999999999984 58999999999999999998888887
Q ss_pred ehhcchhHHHHHHHcCCcceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-----------------
Q 018188 140 AMVVRKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG----------------- 202 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~----------------- 202 (359)
.........+|++++|++|+..+.|....+..++.+.|++.+.+..|+++++++.|+++..++
T Consensus 129 ~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~ 208 (344)
T 3jsk_A 129 AMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDE 208 (344)
T ss_dssp CEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------
T ss_pred hhhcchHHHHHHHHcCCcccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccC
Confidence 777777788999999999987767777778888889999888755799999999999998865
Q ss_pred C--EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHHhcCCcccccccccccccchhhHHhhh
Q 018188 203 G--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRL 280 (359)
Q Consensus 203 ~--~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~ 280 (359)
+ +|.||+++|..+..++..+.+.+..+|+|++||+|||+.+++.+...+++.++|+...++++.++|++..++.++..
T Consensus 209 g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~ 288 (344)
T 3jsk_A 209 AKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNN 288 (344)
T ss_dssp CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHT
T ss_pred CCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhccc
Confidence 3 89999998876555554444456789999999999999999988889999999997779999999999999999999
Q ss_pred ccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCCCccccCC
Q 018188 281 TREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGT 335 (359)
Q Consensus 281 ~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~~~~~~ 335 (359)
+++++||+|+.||++..++|.+||||+||+|++||.+++++++++|+.+...+..
T Consensus 289 t~~v~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~~~~~~~ 343 (344)
T 3jsk_A 289 TREIVPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLRKAQNDK 343 (344)
T ss_dssp CEEEETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CceEcCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhhhhhccC
Confidence 9999999999999999999999999999999999999999999999887766553
No 2
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=100.00 E-value=2.2e-34 Score=272.31 Aligned_cols=265 Identities=58% Similarity=0.949 Sum_probs=225.0
Q ss_pred CcccCCCchhhhhHHHHHhhhhcccccCcccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeeh
Q 018188 63 SFTFDPIKESIVSREMTRRYMTDMVTYADTDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAM 141 (359)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~ 141 (359)
.+.+.++.+....+.+..+|+..+....++||+|||||++|+++|+.|++. +|.+|+|+|+...+||+.|.++..+...
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~ 116 (326)
T 2gjc_A 37 DFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAM 116 (326)
T ss_dssp TCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCE
T ss_pred ccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchh
Confidence 445556667777788888888877777789999999999999999999974 4899999999999999999888888777
Q ss_pred hcchhHHHHHHHcCCcceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEe---C-C--EEEEEEEceeee
Q 018188 142 VVRKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK---G-G--RVGGVVTNWALV 215 (359)
Q Consensus 142 ~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~---~-~--~v~gv~~~~~~~ 215 (359)
..+....++++++|++|...+.+....+..++...|++.+.+..|++++++++|+++..+ + + +|.||.++|..+
T Consensus 117 ~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v 196 (326)
T 2gjc_A 117 VMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLV 196 (326)
T ss_dssp EEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHH
T ss_pred hhhhHHHHHHHhhCcccccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceee
Confidence 777778899999999998777777777888888998888876579999999999999987 3 4 899999988655
Q ss_pred eccCCCCCCCCCeEEEc---------------CEEEEcCCCCCCCCchHHHHHHhcCCcccccccccccccchhhHHhhh
Q 018188 216 SMNHDTQSCMDPNVMEA---------------KIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRL 280 (359)
Q Consensus 216 ~~~~~~~~~g~~~~i~A---------------~~VIlAtGg~s~~~~~g~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~ 280 (359)
..++..+.+.+..+|.| ++||+|||+.+++++...+++..++....++++.+++++..++.+++.
T Consensus 197 ~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~ 276 (326)
T 2gjc_A 197 TQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIH 276 (326)
T ss_dssp HTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHH
T ss_pred cccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeec
Confidence 55544444556788999 999999999999987777767777777779999999999999999999
Q ss_pred ccc--cCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhC
Q 018188 281 TRE--IVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 327 (359)
Q Consensus 281 ~~~--~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~ 327 (359)
+++ ++||+|+.||++..+.|.+||||+||+|++||.+++++++++|.
T Consensus 277 ~~~~~~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 277 SGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CEECTTSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 999 99999999999999999999999999999999999999999873
No 3
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=100.00 E-value=3.4e-32 Score=253.98 Aligned_cols=280 Identities=90% Similarity=1.342 Sum_probs=223.2
Q ss_pred CCCCCCCcccCCCchhhhhHHHHHhhhhcccccCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCc
Q 018188 57 PQYDFNSFTFDPIKESIVSREMTRRYMTDMVTYADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQ 136 (359)
Q Consensus 57 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~ 136 (359)
++++.+.|.|.+++|...+++|+++|+..|..+.++||+|||||++|+++|+.|++++|.+|+||||...+||++|.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~ 84 (284)
T 1rp0_A 5 AGYDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQ 84 (284)
T ss_dssp --CCTTSCCCCCCCHHHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCST
T ss_pred cCCCCcceeeeccchhhhHHHHHHHHHHhhhhccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCc
Confidence 45678899999999999999999999987766677999999999999999999998448999999999999998888887
Q ss_pred ceeehhcchhHHHHHHHcCCcceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeee
Q 018188 137 LFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 216 (359)
Q Consensus 137 ~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~ 216 (359)
.+.....+....+|++++|++|+....+....+...+...|.+++.++.|++++++++|+++..+++++.+|.+.|..+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~ 164 (284)
T 1rp0_A 85 LFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVA 164 (284)
T ss_dssp TCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHH
T ss_pred chHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccc
Confidence 77776666677899999999998776666656777888888888876689999999999999988888888877532111
Q ss_pred ccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEE
Q 018188 217 MNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA 296 (359)
Q Consensus 217 ~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~ 296 (359)
.+.+++.+++..+++||.||+|+|+.+.......+.+..+++...+....+++++..+..++...++++|++|..|+.+.
T Consensus 165 ~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 165 QNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVA 244 (284)
T ss_dssp TCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHH
T ss_pred cccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehh
Confidence 12111112345789999999999998876655555555556544555556666654444455556678899999999888
Q ss_pred eecCCCCCCCccceEEEehHHHHHHHHHHhCCCccccCCc
Q 018188 297 EIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTF 336 (359)
Q Consensus 297 ~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~~~~~~~ 336 (359)
.++|.++++|.|+.|+.||+.++..+.++|.+....++++
T Consensus 245 ~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~~~~~~~~ 284 (284)
T 1rp0_A 245 EIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL 284 (284)
T ss_dssp HHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCCCTTTTCC
T ss_pred hhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhhhhhhcCC
Confidence 8889999999999999999999999999999888777653
No 4
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.2e-24 Score=206.42 Aligned_cols=269 Identities=56% Similarity=0.904 Sum_probs=205.3
Q ss_pred CCCCCcccCCCchhhhhHHHHHhhhhcccccCcccEEEECCChHHHHHHHHhhc-CCCCeEEEEeeccCCCCCcccCCcc
Q 018188 59 YDFNSFTFDPIKESIVSREMTRRYMTDMVTYADTDVIVVGAGSAGLSCAYEISK-NPSIRVAIIEQSVSPGGGAWLGGQL 137 (359)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~-~~G~~V~vlEk~~~~GG~~~~~g~~ 137 (359)
.+.++|++.|+++...+|+|+++|+.+|....++||+||||||+||+||++|++ +.|++|+|+||...+||.++.++..
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~ 112 (326)
T 3fpz_A 33 EDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL 112 (326)
T ss_dssp TTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT
T ss_pred ccccccccCCccHHHHHHHHHHHHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc
Confidence 466789999999999999999999999888889999999999999999999974 2399999999999999999998888
Q ss_pred eeehhcchhHHHHHHHcCCcceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC------CEEEEEEEc
Q 018188 138 FSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG------GRVGGVVTN 211 (359)
Q Consensus 138 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~------~~v~gv~~~ 211 (359)
++...+.....++++++|+.+..........+...+............|.+++....+.++...+ .++.++-..
T Consensus 113 ~~~~~l~~~~~~~~~e~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg 192 (326)
T 3fpz_A 113 FSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192 (326)
T ss_dssp CCCEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEECCcceecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEccC
Confidence 88877777788889999999987776666666666666666666667899999998888877654 234333332
Q ss_pred eeeeeccCCCCCCCCCeE---------------EEcCEEEEcCCCCCCCCchHHHHHHhcCCcccccccccccccchhhH
Q 018188 212 WALVSMNHDTQSCMDPNV---------------MEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDA 276 (359)
Q Consensus 212 ~~~~~~~~~~~~~g~~~~---------------i~A~~VIlAtGg~s~~~~~g~~~~~~~g~~~~~p~~~~~~~~~~~~~ 276 (359)
+..+.........+.... ...+.++.++|..+.......+.....+......+..+++++..+..
T Consensus 193 ~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~ 272 (326)
T 3fpz_A 193 WTLVTQAHGTQCAMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHD 272 (326)
T ss_dssp EHHHHTCTTSSSCCCCEEEEESCBCTTSSBCTTSCCCEEEECCCSCSSSCSHHHHHHHHHCTTCCCCCCCCBCHHHHHHH
T ss_pred ceeeehhhhhhhccCcEEEEeecccccccccceeecceEEEEecceeeEeecceeEEEecCceeeecceecccccccCCe
Confidence 221111111111111122 23468899999888766666666666666666677777777666666
Q ss_pred Hhhhc--cccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhC
Q 018188 277 IVRLT--REIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 327 (359)
Q Consensus 277 ~~~~~--~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~ 327 (359)
++... +...||+|..|+.+...++.++|||+||+|+.||.++++.+++.|.
T Consensus 273 iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 273 VVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHCEECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 54332 3457999999999999999999999999999999999999999873
No 5
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.74 E-value=7.2e-17 Score=158.14 Aligned_cols=213 Identities=20% Similarity=0.343 Sum_probs=139.6
Q ss_pred HhhhhcccccCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCC-cce---------ee-------h-
Q 018188 80 RRYMTDMVTYADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGG-QLF---------SA-------M- 141 (359)
Q Consensus 80 ~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g-~~~---------~~-------~- 141 (359)
++|+..|+ +.++||+|||||++|+++|+.|+++ |.+|+|||+...+|+.....| +.. .. +
T Consensus 17 n~~~~~M~-~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 17 NLYFQSMV-AEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp ------------CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred cccccccc-CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 44544433 3468999999999999999999999 999999999998765431111 000 00 0
Q ss_pred ------hcchhHHHHHHHcCCcceecCCeEE--EechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEcee
Q 018188 142 ------VVRKPAQRFLDELGVEYDEQDNYVV--IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWA 213 (359)
Q Consensus 142 ------~~~~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~ 213 (359)
.......+|++++|+++........ ......+.+.|.+.+. +.|++++++++|+++..+++.+ .|.+.
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~-~~Gv~i~~~~~V~~i~~~~~~~-~V~~~-- 170 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMK-EAGVQLRLETSIGEVERTASGF-RVTTS-- 170 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHH-HHTCEEECSCCEEEEEEETTEE-EEEET--
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHH-HCCCEEEECCEEEEEEEeCCEE-EEEEC--
Confidence 0112456788899998776533222 2345677778777775 5799999999999999887754 34442
Q ss_pred eeeccCCCCCCCCCeEEEcCEEEEcCCCCCCC--C--chHHHHHHhcCC--cccccccccccccchh-hHHhhhccccCC
Q 018188 214 LVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPF--G--ATGVKRLKSIGM--IDSVPGMKALDMNTAE-DAIVRLTREIVP 286 (359)
Q Consensus 214 ~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~--~--~~g~~~~~~~g~--~~~~p~~~~~~~~~~~-~~~~~~~~~~~~ 286 (359)
..+++||.||+|||+++.+ + ..+++.+..+|+ .+..|.+.++.+.... .++..+ +
T Consensus 171 -------------~g~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~~l-----~ 232 (417)
T 3v76_A 171 -------------AGTVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGAL-----A 232 (417)
T ss_dssp -------------TEEEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCEEEEEEESCCEECCHHHHHHTGGG-----T
T ss_pred -------------CcEEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCEecccceeeeEEecCccccccccC-----C
Confidence 1379999999999998731 2 268888888887 5778888887765211 233344 7
Q ss_pred CeeEeceEEEeecCCCCCCCccceEE-----EehHHHHHHH
Q 018188 287 GMIVTGMEVAEIDGAPRMGPTFGAMM-----ISGQKAAHLA 322 (359)
Q Consensus 287 g~~~~g~~v~~~~g~~~~~~~~g~~l-----~sG~~~~~l~ 322 (359)
|+.+. ..+.+ +.. ...|+++ +|||.+.++-
T Consensus 233 G~~~~-~~~~~--~~~---~~~~~~lft~~G~sGp~il~~S 267 (417)
T 3v76_A 233 GVAAD-AEARF--GKA---AFREAVLITHRGLSGPAILQIS 267 (417)
T ss_dssp TCEEE-EEEEE--TTE---EEEEEEEECSSEEESHHHHHHT
T ss_pred CCcee-EEEEE--CCE---eeeeeeEEECCCcchHHHHHHH
Confidence 87775 44433 211 1235676 8999998853
No 6
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.73 E-value=1.3e-16 Score=157.63 Aligned_cols=212 Identities=20% Similarity=0.297 Sum_probs=136.7
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCC-cc--------eee----------h-------h
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGG-QL--------FSA----------M-------V 142 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g-~~--------~~~----------~-------~ 142 (359)
..++||+|||||++|+++|+.|+++ |.+|+||||...+|+.....+ +. +.. + .
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 3458999999999999999999999 999999999987765332111 00 000 0 0
Q ss_pred cchhHHHHHHHcCCcceecCCeEEEe---chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccC
Q 018188 143 VRKPAQRFLDELGVEYDEQDNYVVIK---HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNH 219 (359)
Q Consensus 143 ~~~~~~~~l~~~G~~~~~~~~~~~~~---~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~ 219 (359)
......+|++.+|+++........+. ....+.+.|.+.+. +.|++++++++|+++..+++++.+|.+.+
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~-~~GV~i~~~~~V~~i~~~~~~v~~V~~~~------- 174 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLK-DLGVKIRTNTPVETIEYENGQTKAVILQT------- 174 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETT-------
T ss_pred CHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHH-HCCCEEEeCcEEEEEEecCCcEEEEEECC-------
Confidence 11235678888998876543322222 45677888888776 57999999999999998888877777641
Q ss_pred CCCCCCCCeEEEcCEEEEcCCCCCC--CCc--hHHHHHHhcCC--cccccccccccccchhhHHhhhccccCCCeeEece
Q 018188 220 DTQSCMDPNVMEAKIVVSSCGHDGP--FGA--TGVKRLKSIGM--IDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGM 293 (359)
Q Consensus 220 ~~~~~g~~~~i~A~~VIlAtGg~s~--~~~--~g~~~~~~~g~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~ 293 (359)
..+++||.||+|||+++. .+. .|+..+...|+ .+..|.+.++... .++... ....|+.+.+.
T Consensus 175 -------G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~~--~~~~~~---~~~~g~~~~~~ 242 (447)
T 2i0z_A 175 -------GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSN--EPFIRD---RSLQGLALRDI 242 (447)
T ss_dssp -------CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCEEEEEECSCCEECC--CHHHHT---TTTTTCEEEEE
T ss_pred -------CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCcccCcceeeeeecC--Cccccc---ccccCcccCCe
Confidence 246999999999999883 222 56788888887 3445556665443 222221 00145554444
Q ss_pred EEEee-cCCCCCCCccceEE-----EehHHHHHH
Q 018188 294 EVAEI-DGAPRMGPTFGAMM-----ISGQKAAHL 321 (359)
Q Consensus 294 ~v~~~-~g~~~~~~~~g~~l-----~sG~~~~~l 321 (359)
.+.+. ..+.+.....|+++ ++||.++++
T Consensus 243 ~~~~~~~~g~r~~~~~ge~~~t~~~~~g~~~l~~ 276 (447)
T 2i0z_A 243 NLSVLNPKGKAIISHKMDMLFTHFGLSGPAALRC 276 (447)
T ss_dssp EEEECC----CEEEEEEEEEECSSEEESHHHHHH
T ss_pred EEEEEecCCceEecccCCeEEECCcccHHHHHHH
Confidence 44442 22233222334554 789988775
No 7
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.67 E-value=2.7e-15 Score=146.26 Aligned_cols=204 Identities=16% Similarity=0.231 Sum_probs=134.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCccc----------CCcceeehh--------------cchh
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWL----------GGQLFSAMV--------------VRKP 146 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~----------~g~~~~~~~--------------~~~~ 146 (359)
++||+|||||++|+++|+.|+++ |.+|+||||+..+|+.... .+..+..+. ....
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 58999999999999999999999 9999999999877542211 111100000 0123
Q ss_pred HHHHHHHcCCcceecCCeEEEe--chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEe----CCEEEEEEEceeeeeccCC
Q 018188 147 AQRFLDELGVEYDEQDNYVVIK--HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHD 220 (359)
Q Consensus 147 ~~~~l~~~G~~~~~~~~~~~~~--~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~----~~~v~gv~~~~~~~~~~~~ 220 (359)
..+|++++|+++........+. +...+.+.|.+.+. +.|++++++++|+++..+ ++.+ .|...
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~-~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~--------- 151 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECD-KYGAKILLRSEVSQVERIQNDEKVRF-VLQVN--------- 151 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHH-HHTCEEECSCCEEEEEECCSCSSCCE-EEEET---------
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHH-HCCCEEEeCCEEEEEEcccCcCCCeE-EEEEC---------
Confidence 5678889999886543333332 56677777777765 579999999999999876 4543 34332
Q ss_pred CCCCCCCeEEEcCEEEEcCCCCCCC--Cc--hHHHHHHhcCC--cccccccccccccchhhHH-hhhccccCCCeeEece
Q 018188 221 TQSCMDPNVMEAKIVVSSCGHDGPF--GA--TGVKRLKSIGM--IDSVPGMKALDMNTAEDAI-VRLTREIVPGMIVTGM 293 (359)
Q Consensus 221 ~~~~g~~~~i~A~~VIlAtGg~s~~--~~--~g~~~~~~~g~--~~~~p~~~~~~~~~~~~~~-~~~~~~~~~g~~~~g~ 293 (359)
..+++||.||+|||+.+.+ +. .++..+..+|+ .+..|++.++.+.. .+.+ ..+ .|..+. .
T Consensus 152 ------~g~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~-~~~~~~~l-----~g~~~~-~ 218 (401)
T 2gqf_A 152 ------STQWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRE-TDKFLTAL-----SGISLP-V 218 (401)
T ss_dssp ------TEEEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCG-GGGGGGGG-----TTCEEE-E
T ss_pred ------CCEEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCC-chhhcccC-----CCeeee-e
Confidence 2379999999999998732 22 57888888887 46678877765432 2222 333 454442 2
Q ss_pred EEEeecCCCCCCCccceEEE-----ehHHHHHHHH
Q 018188 294 EVAEIDGAPRMGPTFGAMMI-----SGQKAAHLAL 323 (359)
Q Consensus 294 ~v~~~~g~~~~~~~~g~~l~-----sG~~~~~l~l 323 (359)
.+.++ |.. . ..|++++ ||+.+.++.-
T Consensus 219 ~~~i~-G~~-~--~~g~~l~t~~g~sG~~~l~~s~ 249 (401)
T 2gqf_A 219 TITAL-CGK-S--FYNQLLFTHRGISGPAVLQISN 249 (401)
T ss_dssp EEEET-TSC-E--EEEEEEECSSEEESHHHHHHTT
T ss_pred EEEEc-CCc-e--EEeCEEEECCCccHHHHHHHHH
Confidence 23222 321 1 3377884 9999888753
No 8
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.60 E-value=7.2e-15 Score=140.82 Aligned_cols=132 Identities=20% Similarity=0.303 Sum_probs=94.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceec---------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQ--------- 161 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~--------- 161 (359)
+|||+||||||+|+++|+.|+++ |++|+||||.+.+|.....++.+.. ..++++++.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~-G~~V~v~Er~~~~~~~~~~g~~l~~---------~~l~~l~~~~~~~~~~~~~~~~ 73 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGEGLSK---------GILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCCEEET---------HHHHHTTCCCCTTTEEEEESEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCCCceecccCH---------HHHHHcCCCchhhhhhcccceE
Confidence 59999999999999999999999 9999999998877654333333221 2333444321100
Q ss_pred -------------------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCC
Q 018188 162 -------------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 222 (359)
Q Consensus 162 -------------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~ 222 (359)
....+..+...+...|.+.+. +.|++++++++|+++..+++++.++....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~-~~G~~~~~~~~v~~~~~~~~~~~~v~~~~---------- 142 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA-KAGADVWVKSPALGVIKENGKVAGAKIRH---------- 142 (397)
T ss_dssp EEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHH-HHTCEEESSCCEEEEEEETTEEEEEEEEE----------
T ss_pred EEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHH-hcCcEEeeeeeeeeeeeccceeeeeeecc----------
Confidence 011233455667777777775 67999999999999999999888776531
Q ss_pred CCCCCeEEEcCEEEEcCCCCCC
Q 018188 223 SCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 223 ~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
+++..+++||+||.|+|..|.
T Consensus 143 -~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 143 -NNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp -TTEEEEEEEEEEEECCCTTCH
T ss_pred -cccceEEEEeEEEeCCccccH
Confidence 123467999999999997763
No 9
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.60 E-value=1.2e-14 Score=130.96 Aligned_cols=197 Identities=22% Similarity=0.250 Sum_probs=119.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
++||+|||||++|+.+|+.|++. |.+|+|||+.....| .+..... ... ... ++++++. +.. .+ +.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~~~~G-~~~~~~~-~~~-~~~---~~~~~~~---d~~--g~---~~ 67 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSLDAVM-MPFLPPK-PPF-PPG---SLLERAY---DPK--DE---RV 67 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTT-CCSSCCC-SCC-CTT---CHHHHHC---CTT--CC---CH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCCCcCC-cccCccc-ccc-chh---hHHhhhc---cCC--CC---CH
Confidence 58999999999999999999999 999999999843333 2211110 000 001 1122221 000 00 34
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCC----
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFG---- 246 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~---- 246 (359)
..+...|.+.+.+..|++++ +++|+++..+++++.+|.+.+ ..+++||.||+|+|.++..-
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~--------------g~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWE--------------GPPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETT--------------SCCEECSEEEECCTTCSSCEEEET
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECC--------------CCEEECCEEEECCCCChhhceecC
Confidence 45666666666533499999 569999998888877776641 24799999999999865311
Q ss_pred ----------c----hHHHHHHhcCCccc--------cccc-------ccccccchhhHHhhhccccCCCeeEeceEEEe
Q 018188 247 ----------A----TGVKRLKSIGMIDS--------VPGM-------KALDMNTAEDAIVRLTREIVPGMIVTGMEVAE 297 (359)
Q Consensus 247 ----------~----~g~~~~~~~g~~~~--------~p~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~ 297 (359)
. .-.+.+...|+... +.+. ..++.+..+...+ .....||+|..|+.+
T Consensus 133 ~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~--~~t~~p~iya~G~~a-- 208 (232)
T 2cul_A 133 GVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTF--RLKRLEGLYAVGLCV-- 208 (232)
T ss_dssp TEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTT--EETTSBSEEECGGGT--
T ss_pred CccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccc--cccccccceeeeecc--
Confidence 0 11233444443100 0011 1222222222222 223679999999877
Q ss_pred ecCCCCCCCccceEEEehHHHHHHHHHHhC
Q 018188 298 IDGAPRMGPTFGAMMISGQKAAHLALKALG 327 (359)
Q Consensus 298 ~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~ 327 (359)
..| .++.++.+|..+++.++++++
T Consensus 209 ~~g------~~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 209 REG------DYARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp SCC------CHHHHHHHHHHHHHHHHHHC-
T ss_pred cCc------cHHHHHHHHHHHHHHHHhhcC
Confidence 322 778888999999999998863
No 10
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.58 E-value=1.3e-14 Score=145.72 Aligned_cols=141 Identities=22% Similarity=0.348 Sum_probs=101.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCccee---------------e-------h------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFS---------------A-------M------ 141 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~---------------~-------~------ 141 (359)
.++||||||+|++|+++|+.|+++ |.+|+||||...+||.+...++.+. . .
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~-G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARA-GADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 358999999999999999999999 9999999999998887643322110 0 0
Q ss_pred ---------hc--chhHHHHHHHcCCcceec-----------CCeEE---------------------Ee----------
Q 018188 142 ---------VV--RKPAQRFLDELGVEYDEQ-----------DNYVV---------------------IK---------- 168 (359)
Q Consensus 142 ---------~~--~~~~~~~l~~~G~~~~~~-----------~~~~~---------------------~~---------- 168 (359)
+. .....+|+.++|++|... ..... ..
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~ 198 (510)
T 4at0_A 119 GADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEK 198 (510)
T ss_dssp SCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTB
T ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccccC
Confidence 00 013457888888877542 00000 00
Q ss_pred ch-HHHHHHHHHHHHhCCCcEEEcceeeeeEEEe-CCEEEEEEEceeeeeccCCCCCCCCCeEEEcC-EEEEcCCCCC
Q 018188 169 HA-ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK-IVVSSCGHDG 243 (359)
Q Consensus 169 ~~-~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~-~VIlAtGg~s 243 (359)
.. ..+...|.+.+. +.|++|+++++|++|+.+ +++|+||.+.. .+...+|+|+ .||+|||+++
T Consensus 199 ~g~~~l~~~L~~~~~-~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----------~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAE-KLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----------YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHH-HTTCEEECSEEEEEEEECTTCCEEEEEEEE-----------TTEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHH-HcCCEEEecCEeEEEEECCCCcEEEEEEEE-----------CCcEEEEEeCCeEEEeCCChh
Confidence 11 167788877776 569999999999999998 68999998742 1123579994 9999999987
No 11
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.57 E-value=1.5e-14 Score=146.93 Aligned_cols=144 Identities=22% Similarity=0.285 Sum_probs=103.6
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCC-cceee---------------------------
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGG-QLFSA--------------------------- 140 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g-~~~~~--------------------------- 140 (359)
..++||||||+|++|+++|+.|+++ |++|+||||...+||.+...+ .+...
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3468999999999999999999999 999999999998887654332 22100
Q ss_pred ----hhc------chhHHHHHHHcCCcceec---C--CeEEE-------echHHHHHHHHHHHHhCCCcEEEcceeeeeE
Q 018188 141 ----MVV------RKPAQRFLDELGVEYDEQ---D--NYVVI-------KHAALFTSTIMSKLLARPNVKLFNAVAAEDL 198 (359)
Q Consensus 141 ----~~~------~~~~~~~l~~~G~~~~~~---~--~~~~~-------~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l 198 (359)
..+ .....+|+.++|++|+.. . .+... .....+...|.+.+. +.|++|+++++|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~-~~gv~i~~~~~v~~l 276 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAK-EQGIDTRLNSRVVKL 276 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHH-HTTCCEECSEEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEEEEE
Confidence 000 013457888889887531 1 11111 124567788777775 579999999999999
Q ss_pred EEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 199 IVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 199 ~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
+.++ ++|.||.+.. . ++...+++||.||+|||+++.
T Consensus 277 ~~~~~g~v~Gv~~~~------~----~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 277 VVNDDHSVVGAVVHG------K----HTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp EECTTSBEEEEEEEE------T----TTEEEEEEEEEEEECCCCCTT
T ss_pred EECCCCcEEEEEEEe------C----CCcEEEEEcCEEEEecCCccc
Confidence 9888 8998887741 0 112347999999999999874
No 12
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.57 E-value=3.5e-14 Score=144.40 Aligned_cols=144 Identities=22% Similarity=0.316 Sum_probs=102.7
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccC-Ccceee----------------h----------
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLG-GQLFSA----------------M---------- 141 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~-g~~~~~----------------~---------- 141 (359)
..++||||||||++|+++|+.|+++ |.+|+||||...+||.+... |.+... +
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS-GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3468999999999999999999999 99999999999888765433 221100 0
Q ss_pred hcc-----------hhHHHHHHHcCCcceec---C--CeEE--E-----echHHHHHHHHHHHHhCCCcEEEcceeeeeE
Q 018188 142 VVR-----------KPAQRFLDELGVEYDEQ---D--NYVV--I-----KHAALFTSTIMSKLLARPNVKLFNAVAAEDL 198 (359)
Q Consensus 142 ~~~-----------~~~~~~l~~~G~~~~~~---~--~~~~--~-----~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l 198 (359)
... ....+|+.++|++|+.. . .+.. . .....+...|.+.+. +.|++|+++++|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~-~~gv~i~~~~~v~~l 281 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAV-KRNIDLRMNTRGIEV 281 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEeeEe
Confidence 000 13457888889888531 1 1111 1 123567778777775 579999999999999
Q ss_pred EEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 199 IVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 199 ~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
+.++ ++|.||.+.. . ++...+|+||.||+|||+++.
T Consensus 282 ~~~~~g~v~Gv~~~~------~----~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 282 LKDDKGTVKGILVKG------M----YKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp EECTTSCEEEEEEEE------T----TTEEEEEECSEEEECCCCCTT
T ss_pred EEcCCCeEEEEEEEe------C----CCcEEEEECCeEEEeCCCccc
Confidence 9877 8898887741 0 112347999999999999763
No 13
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.52 E-value=7.4e-14 Score=143.09 Aligned_cols=158 Identities=21% Similarity=0.282 Sum_probs=109.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc-ccCCccee--------e---h----------hcc---
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA-WLGGQLFS--------A---M----------VVR--- 144 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~-~~~g~~~~--------~---~----------~~~--- 144 (359)
.++||||||+|++|++||+.|++. |.+|+||||....++++ +..|++.. . . ...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~ 95 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA-GFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDA 95 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHC-CCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 358999999999999999999999 99999999987655543 22222110 0 0 000
Q ss_pred --------hhHHHHHHHcCCcceecCC--eE------------------EEe-----chHHHHHHHHHHHHhCCCcEEEc
Q 018188 145 --------KPAQRFLDELGVEYDEQDN--YV------------------VIK-----HAALFTSTIMSKLLARPNVKLFN 191 (359)
Q Consensus 145 --------~~~~~~l~~~G~~~~~~~~--~~------------------~~~-----~~~~~~~~L~~~~~~~~gv~i~~ 191 (359)
...++||.++|++|+.... +. ... ....+...|.+.+. +.|+++++
T Consensus 96 v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~-~~gv~i~~ 174 (621)
T 2h88_A 96 IHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSL-RYDTSYFV 174 (621)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHT-TSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHH-hCCCEEEE
Confidence 1345788899998865321 10 111 13467778877775 68999999
Q ss_pred ceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC--------CCc--hHHHHHHhcCC
Q 018188 192 AVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP--------FGA--TGVKRLKSIGM 258 (359)
Q Consensus 192 ~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~--------~~~--~g~~~~~~~g~ 258 (359)
++.|++|+.++++|.||.+.+ .. ++....|.|+.||+|||+++. .+. .|+..+...|.
T Consensus 175 ~~~v~~Li~~~g~v~Gv~~~~------~~---~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa 242 (621)
T 2h88_A 175 EYFALDLLMENGECRGVIALC------IE---DGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGL 242 (621)
T ss_dssp TEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTC
T ss_pred ceEEEEEEEECCEEEEEEEEE------cC---CCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCC
Confidence 999999999889999987631 01 123357999999999999873 111 46666666654
No 14
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.52 E-value=1e-13 Score=133.53 Aligned_cols=131 Identities=21% Similarity=0.307 Sum_probs=94.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcce-----------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYD----------- 159 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~----------- 159 (359)
++||+|||||++|+++|+.|+++ |++|+|||+...+|+....++... .++++++|+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~-G~~V~l~E~~~~~g~~~~~~~~~~---------~~~~~~lg~~~~~~~~~~~~~~~ 73 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGEGLS---------KGILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCCEEE---------THHHHHTTCCCCTTTEEEEESEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCcccccccC---------HHHHHHcCCCCChHHhhhhcceE
Confidence 48999999999999999999999 999999999987765433333221 133444544111
Q ss_pred ----ec-------------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCC
Q 018188 160 ----EQ-------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 222 (359)
Q Consensus 160 ----~~-------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~ 222 (359)
.. ..+.+..+...+...|.+.+. +.|++++++++|+++..+++++.+|.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~gv~i~~~~~v~~i~~~~~~v~gv~~~~---------- 142 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA-KAGADVWVKSPALGVIKENGKVAGAKIRH---------- 142 (397)
T ss_dssp EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHH-HHTCEEESSCCEEEEEEETTEEEEEEEEE----------
T ss_pred EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHH-hCCCEEEECCEEEEEEEeCCEEEEEEEEE----------
Confidence 00 011223455667777777775 57999999999999999988888777631
Q ss_pred CCCCCeEEEcCEEEEcCCCCC
Q 018188 223 SCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 223 ~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++..+++||.||+|+|.++
T Consensus 143 -~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 143 -NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp -TTEEEEEEEEEEEECCCTTC
T ss_pred -CCeEEEEEcCEEEECCCcch
Confidence 01246899999999999776
No 15
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.51 E-value=1.6e-13 Score=141.56 Aligned_cols=143 Identities=19% Similarity=0.146 Sum_probs=100.3
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc-ccCCcce-----------ee-------------hhc-
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA-WLGGQLF-----------SA-------------MVV- 143 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~-~~~g~~~-----------~~-------------~~~- 143 (359)
.++||||||||++|++||+.|++. |.+|+||||....+|++ +..|++. +. ...
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred ccccEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 358999999999999999999999 99999999987654433 2222110 00 000
Q ss_pred ----------chhHHHHHHHcCCcceecCCeE---------------------------------EEe-----chHHHHH
Q 018188 144 ----------RKPAQRFLDELGVEYDEQDNYV---------------------------------VIK-----HAALFTS 175 (359)
Q Consensus 144 ----------~~~~~~~l~~~G~~~~~~~~~~---------------------------------~~~-----~~~~~~~ 175 (359)
....++||.++|++|+...... ... ....+..
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~ 162 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLF 162 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHH
Confidence 0234578889999886532110 010 1345777
Q ss_pred HHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 176 TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 176 ~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.|.+.+. +.|++|++++.|++|+.++++|.||.+.+ .. ++....|.|+.||+|||+++
T Consensus 163 ~L~~~a~-~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~------~~---~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 163 AVANECL-KLGVSIQDRKEAIALIHQDGKCYGAVVRD------LV---TGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHH-HHTCEEECSEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHH-hCCCEEEECcEEEEEEecCCEEEEEEEEE------CC---CCcEEEEEcCEEEEccCcch
Confidence 8777776 56999999999999998888999987631 01 12335799999999999987
No 16
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.50 E-value=7.2e-14 Score=144.10 Aligned_cols=145 Identities=14% Similarity=0.286 Sum_probs=103.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcC-----CCCeEEEEeeccCCCCCcccCC--cceee----------------------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKN-----PSIRVAIIEQSVSPGGGAWLGG--QLFSA---------------------- 140 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~-----~G~~V~vlEk~~~~GG~~~~~g--~~~~~---------------------- 140 (359)
.++||||||+|++||+||+.|++. ||.+|+||||....+++++..| ++-..
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~d 100 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLVR 100 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCCC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCcc
Confidence 458999999999999999999985 4899999999877666665555 22100
Q ss_pred -----hhcc--hhHHHHHHHcCCcceec-CC-e--------------------------EEEechHHHHHHHHHHHHhC-
Q 018188 141 -----MVVR--KPAQRFLDELGVEYDEQ-DN-Y--------------------------VVIKHAALFTSTIMSKLLAR- 184 (359)
Q Consensus 141 -----~~~~--~~~~~~l~~~G~~~~~~-~~-~--------------------------~~~~~~~~~~~~L~~~~~~~- 184 (359)
.+.. ...++||.++|++|+.. .. . ........+...|.+.+.+.
T Consensus 101 ~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~~ 180 (662)
T 3gyx_A 101 EDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKNAL 180 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHhcC
Confidence 0000 23457889999999764 11 1 01122345667777777543
Q ss_pred CCcEEEcceeeeeEEEeCC---EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 185 PNVKLFNAVAAEDLIVKGG---RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 185 ~gv~i~~~~~V~~l~~~~~---~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.|+++++++.|++|+.+++ +|.||.+.+ .. ++....|.|+.||+||||++
T Consensus 181 ~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~------~~---~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 181 GQDRIIERIFIVKLLLDKNTPNRIAGAVGFN------LR---ANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp CTTTEECSEEECCCEECSSSTTBEEEEEEEE------SS---SSCEEEEECSEEEECCCCBC
T ss_pred CCcEEEEceEEEEEEEeCCccceEEEEEEEE------cC---CCcEEEEEeCEEEECCCccc
Confidence 2999999999999999876 999987632 11 12346799999999999987
No 17
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.50 E-value=1.2e-13 Score=139.34 Aligned_cols=149 Identities=17% Similarity=0.253 Sum_probs=102.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCC---------------------------CcccCCcceeehh-
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGG---------------------------GAWLGGQLFSAMV- 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG---------------------------~~~~~g~~~~~~~- 142 (359)
++||||||||++|+++|+.|++. |++|+|||++..+++ +.|..+.++....
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 48999999999999999999999 999999999865411 1111111211111
Q ss_pred ---cchhHHHHHHHcCCcceecCC-eEE--EechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeee
Q 018188 143 ---VRKPAQRFLDELGVEYDEQDN-YVV--IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 216 (359)
Q Consensus 143 ---~~~~~~~~l~~~G~~~~~~~~-~~~--~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~ 216 (359)
......+++.++|.+...... .+. ......+...|.+.+. +.|++++++++|+++..+++++.+|.+.
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~-~~Gv~I~~~t~V~~I~~~~~~v~gV~l~----- 259 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATII-ELGGEIRFSTRVDDLHMEDGQITGVTLS----- 259 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHH-HTTCEEESSCCEEEEEESSSBEEEEEET-----
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHH-hcCCEEEeCCEEEEEEEeCCEEEEEEEC-----
Confidence 113455777788876443211 111 1123556677766665 5799999999999999888888888774
Q ss_pred ccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHHhcCC
Q 018188 217 MNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGM 258 (359)
Q Consensus 217 ~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~~~g~ 258 (359)
+..++.|+.||+|+|+.+. .++..+...|+
T Consensus 260 ---------~G~~i~Ad~VVlA~G~~s~---~~~~~l~~~Gi 289 (549)
T 3nlc_A 260 ---------NGEEIKSRHVVLAVGHSAR---DTFEMLHERGV 289 (549)
T ss_dssp ---------TSCEEECSCEEECCCTTCH---HHHHHHHHTTC
T ss_pred ---------CCCEEECCEEEECCCCChh---hHHHHHHHcCC
Confidence 2357999999999998763 45566666665
No 18
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.49 E-value=2.9e-13 Score=137.67 Aligned_cols=143 Identities=20% Similarity=0.326 Sum_probs=101.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCC-cceee----------------------------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGG-QLFSA---------------------------- 140 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g-~~~~~---------------------------- 140 (359)
.++||+|||+|++|+++|+.|++. |.+|+|+||...+||.+...+ .+...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~-g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA-GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS-SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 358999999999999999999999 999999999998887653322 11100
Q ss_pred ---hhc------chhHHHHHHHcCCcceec---C--CeEEEe-------chHHHHHHHHHHHHhCCCcEEEcceeeeeEE
Q 018188 141 ---MVV------RKPAQRFLDELGVEYDEQ---D--NYVVIK-------HAALFTSTIMSKLLARPNVKLFNAVAAEDLI 199 (359)
Q Consensus 141 ---~~~------~~~~~~~l~~~G~~~~~~---~--~~~~~~-------~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~ 199 (359)
..+ .....+||.++|++|+.. . .+.... ....+...|.+.+. +.|++++++++|++|+
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~-~~gv~i~~~t~v~~l~ 282 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAV-KRGTDIRLNSRVVRIL 282 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHH-HcCCeEEecCEEEEEE
Confidence 000 023457888889887532 1 111111 24567777777775 5799999999999998
Q ss_pred EeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 200 VKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 200 ~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
.++ ++|.||.+.. .++...+|.||.||+|||+++.
T Consensus 283 ~~~~g~v~GV~~~~----------~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 283 EDASGKVTGVLVKG----------EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp EC--CCEEEEEEEE----------TTTEEEEEECSEEEECCCCCTT
T ss_pred ECCCCeEEEEEEEe----------CCCcEEEEEcCEEEEeCCCCcc
Confidence 887 8898887741 0112357999999999999874
No 19
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.49 E-value=1.6e-13 Score=141.43 Aligned_cols=144 Identities=19% Similarity=0.324 Sum_probs=97.4
Q ss_pred CcccEEEECCChHHHHHHHHhh---c-CCCCeEEEEeeccCCCCCcccCCcc-----e---------ee---h-------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEIS---K-NPSIRVAIIEQSVSPGGGAWLGGQL-----F---------SA---M------- 141 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La---~-~~G~~V~vlEk~~~~GG~~~~~g~~-----~---------~~---~------- 141 (359)
.++||||||||++||+||+.|+ + . |.+|+||||....+++.+.+|.. + +. +
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~-G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 99 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG-GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLD 99 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT-TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC-CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHH
Confidence 3589999999999999999999 6 8 99999999987544333322210 1 00 0
Q ss_pred ---hc-----------chhHHHHHHHcCCcceecCC--e------EEEechHHHHHHHHHHHHhCC-Cc-EEEcceeeee
Q 018188 142 ---VV-----------RKPAQRFLDELGVEYDEQDN--Y------VVIKHAALFTSTIMSKLLARP-NV-KLFNAVAAED 197 (359)
Q Consensus 142 ---~~-----------~~~~~~~l~~~G~~~~~~~~--~------~~~~~~~~~~~~L~~~~~~~~-gv-~i~~~~~V~~ 197 (359)
.. .....+||.++|++|+.... + ........+.+.|.+.+. +. |+ ++++++.|++
T Consensus 100 g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~-~~~gv~~i~~~~~v~~ 178 (643)
T 1jnr_A 100 MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAK-MAVGEENIYERVFIFE 178 (643)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHH-HHHCGGGEECSEEEEE
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHH-hcCCCcEEEecCEEEE
Confidence 00 01245788889999864321 1 111123345566655554 44 89 9999999999
Q ss_pred EEEeCC---EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 198 LIVKGG---RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 198 l~~~~~---~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
|+.+++ +|.||.+.+ .. ++....|.|+.||+|||+++.
T Consensus 179 L~~~~~~~g~v~Gv~~~~------~~---~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 179 LLKDNNDPNAVAGAVGFS------VR---EPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp EEECTTCTTBEEEEEEEE------SS---SSCEEEEECSEEEECCCCBCS
T ss_pred EEEcCCccceeEEEEEEE------ec---CCcEEEEEcCEEEECCCcccc
Confidence 998877 999987631 01 122357999999999999874
No 20
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.48 E-value=2.7e-13 Score=138.30 Aligned_cols=158 Identities=20% Similarity=0.286 Sum_probs=107.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc-ccCCcce--------ee-------------hhc----
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA-WLGGQLF--------SA-------------MVV---- 143 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~-~~~g~~~--------~~-------------~~~---- 143 (359)
.++||||||+|++|+++|+.|+++ |.+|+||||....+|++ +..|++. +. ...
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~-G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQS-GQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 358999999999999999999999 99999999987665433 2222211 00 000
Q ss_pred -------chhHHHHHHHcCCcceecCC--eE-----------------EEe-----chHHHHHHHHHHHHhCCCcEEEcc
Q 018188 144 -------RKPAQRFLDELGVEYDEQDN--YV-----------------VIK-----HAALFTSTIMSKLLARPNVKLFNA 192 (359)
Q Consensus 144 -------~~~~~~~l~~~G~~~~~~~~--~~-----------------~~~-----~~~~~~~~L~~~~~~~~gv~i~~~ 192 (359)
.....+||.++|++|+.... +. ... ....+...|.+.+. +.|++|+++
T Consensus 85 v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~-~~gv~i~~~ 163 (588)
T 2wdq_A 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNL-KNHTTIFSE 163 (588)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHH-HTTCEEEET
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHH-hCCCEEEeC
Confidence 01345788889998864311 10 111 12467778877776 469999999
Q ss_pred eeeeeEEEe-CCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCC--------Cc--hHHHHHHhcCC
Q 018188 193 VAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPF--------GA--TGVKRLKSIGM 258 (359)
Q Consensus 193 ~~V~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~--------~~--~g~~~~~~~g~ 258 (359)
+.|++|+.+ +++|.||.+.+ .. ++...+|.|+.||+|||+++.. +. .|+..+...|.
T Consensus 164 ~~v~~L~~~~~g~v~Gv~~~~------~~---~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa 231 (588)
T 2wdq_A 164 WYALDLVKNQDGAVVGCTALC------IE---TGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGV 231 (588)
T ss_dssp EEEEEEEECTTSCEEEEEEEE------TT---TCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTC
T ss_pred cEEEEEEECCCCEEEEEEEEE------cC---CCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCC
Confidence 999999986 67888887631 01 1223579999999999997621 11 46666666664
No 21
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.48 E-value=3.1e-13 Score=128.43 Aligned_cols=138 Identities=18% Similarity=0.214 Sum_probs=87.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCC-CCcccCCcceee-hh-----------cc--h----------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPG-GGAWLGGQLFSA-MV-----------VR--K---------- 145 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~G-G~~~~~g~~~~~-~~-----------~~--~---------- 145 (359)
++||+|||||++|+++|+.|+++ |.+|+||||...+| |.++..++.+.. .. .. .
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 48999999999999999999999 99999999986554 333222211110 00 00 0
Q ss_pred ----------------------hHHHHHHHcCCc-ceec---------CC------e----EEEechHHHHHHHHHHHHh
Q 018188 146 ----------------------PAQRFLDELGVE-YDEQ---------DN------Y----VVIKHAALFTSTIMSKLLA 183 (359)
Q Consensus 146 ----------------------~~~~~l~~~G~~-~~~~---------~~------~----~~~~~~~~~~~~L~~~~~~ 183 (359)
...+++...|++ +... .. . ....+...+...|.+.+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 161 (369)
T 3dme_A 83 VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAE- 161 (369)
T ss_dssp CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHH-
T ss_pred CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHH-
Confidence 111222334433 2110 00 0 012345567788777775
Q ss_pred CCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 184 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 184 ~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
+.|++++++++|+++..+++.+..|.+. +++..+++||.||+|+|.+
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~~~~v~~~------------~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 162 SDGAQLVFHTPLIAGRVRPEGGFELDFG------------GAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp HTTCEEECSCCEEEEEECTTSSEEEEEC------------TTSCEEEEEEEEEECCGGG
T ss_pred HCCCEEECCCEEEEEEEcCCceEEEEEC------------CCceeEEEeCEEEECCCcc
Confidence 6799999999999999876553335442 1123689999999999944
No 22
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.47 E-value=2.9e-13 Score=138.46 Aligned_cols=142 Identities=20% Similarity=0.237 Sum_probs=98.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeeccCCCCCc-ccCCcceee-------------------hhc-----
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPS--IRVAIIEQSVSPGGGA-WLGGQLFSA-------------------MVV----- 143 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~vlEk~~~~GG~~-~~~g~~~~~-------------------~~~----- 143 (359)
++||||||||++|+++|+.|++. | .+|+||||....++.+ +..|++... ...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~-G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQA-NPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-CTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-CCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 58999999999999999999998 8 9999999987654432 222222100 000
Q ss_pred ------chhHHHHHHHcCCcceecCC--e----------EEEec-----hHHHHHHHHHHHHhCCC-cEEEcceeeeeEE
Q 018188 144 ------RKPAQRFLDELGVEYDEQDN--Y----------VVIKH-----AALFTSTIMSKLLARPN-VKLFNAVAAEDLI 199 (359)
Q Consensus 144 ------~~~~~~~l~~~G~~~~~~~~--~----------~~~~~-----~~~~~~~L~~~~~~~~g-v~i~~~~~V~~l~ 199 (359)
....++||.++|++|+.... + ....+ ...+...|.+.+. +.| +++++++.|++++
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~-~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSL-QFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHT-TCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHH-hCCCcEEEeCCEEEEEE
Confidence 01345788889998875321 1 01111 3467778877775 456 9999999999999
Q ss_pred EeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 200 VKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 200 ~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++++|.||.+.+ .. ++....|.|+.||+|||+++
T Consensus 163 ~~~g~v~Gv~~~~------~~---~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 163 VDDGHVRGLVAMN------MM---EGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp EETTEEEEEEEEE------TT---TTEEEEEECSCEEECCCCCG
T ss_pred EeCCEEEEEEEEE------cC---CCcEEEEEcCeEEECCCCCc
Confidence 9888898886531 01 11234799999999999986
No 23
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.47 E-value=1.5e-13 Score=138.86 Aligned_cols=144 Identities=26% Similarity=0.381 Sum_probs=89.9
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc-ccCCcceee------------------------hhc
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA-WLGGQLFSA------------------------MVV 143 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~-~~~g~~~~~------------------------~~~ 143 (359)
..++||||||+|++|+++|+.|++ |.+|+||||....+|++ +.+|++... ..+
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~--G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v 83 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAV 83 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc--CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHH
Confidence 346899999999999999999987 89999999998776544 223322110 000
Q ss_pred ------chhHHHHHHHcCCcceecC------CeE----------EEe-----chHHHHHHHHHHHHhCCCcEEEcceeee
Q 018188 144 ------RKPAQRFLDELGVEYDEQD------NYV----------VIK-----HAALFTSTIMSKLLARPNVKLFNAVAAE 196 (359)
Q Consensus 144 ------~~~~~~~l~~~G~~~~~~~------~~~----------~~~-----~~~~~~~~L~~~~~~~~gv~i~~~~~V~ 196 (359)
.....+||.++|++|+... .+. ... ....+...|.+.+.+..|+++++++.|+
T Consensus 84 ~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~ 163 (540)
T 1chu_A 84 EFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAV 163 (540)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEE
Confidence 1235678889999886532 111 011 1224455666776655799999999999
Q ss_pred eEEE-eCC------EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 197 DLIV-KGG------RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 197 ~l~~-~~~------~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+|+. +++ +|.||.+.+ .. ++...+|.||.||+|||+++
T Consensus 164 ~L~~~~~g~~~~~~~v~Gv~~~~------~~---~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 164 DLIVSDKIGLPGTRRVVGAWVWN------RN---KETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp EEEEGGGTTCCSSCBEEEEEEEE------TT---TTEEEEEECSEEEECCCCCG
T ss_pred EEEEcCCCCcccCCEEEEEEEEE------cC---CCcEEEEEcCeEEECCCCcc
Confidence 9998 445 888887742 00 11234799999999999987
No 24
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.44 E-value=6.7e-13 Score=131.94 Aligned_cols=134 Identities=19% Similarity=0.311 Sum_probs=95.5
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc-ccCCcceeeh---------h----------c---------
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA-WLGGQLFSAM---------V----------V--------- 143 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~-~~~g~~~~~~---------~----------~--------- 143 (359)
||||||+|++|+++|+.|++. |.+|+||||. ..+|.+ +..|++.... . .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~-G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA-GKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 899999999999999999999 9999999999 555543 3333221100 0 0
Q ss_pred --chhHHHHHHHcCCcceec----C--CeEEEe-----chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEE
Q 018188 144 --RKPAQRFLDELGVEYDEQ----D--NYVVIK-----HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVT 210 (359)
Q Consensus 144 --~~~~~~~l~~~G~~~~~~----~--~~~~~~-----~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~ 210 (359)
.....+|+.++|++|+.. . .+.... ....+...|.+.+ ++.|++++++++| ++..+++++.|+.+
T Consensus 79 ~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~-~~~gv~i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 79 SEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLA-REEGIPIIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHH-HHTTCCEECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHH-HhCCCEEEECcEE-EEEEeCCEEEEEEE
Confidence 113457888899988751 1 111111 2346677777777 4689999999999 99888888888876
Q ss_pred ceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 211 NWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 211 ~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.. +..++.||.||+|||+++
T Consensus 157 ~~-------------~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 157 EK-------------RGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp TT-------------TEEECCCSEEEECCCCCG
T ss_pred Ee-------------CCCeEEeeeEEECCCCCc
Confidence 31 123577999999999887
No 25
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.44 E-value=7.7e-13 Score=130.57 Aligned_cols=135 Identities=22% Similarity=0.387 Sum_probs=93.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCC-CCcccCCcceeehhcchhHHHHHHHcCCccee---------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPG-GGAWLGGQLFSAMVVRKPAQRFLDELGVEYDE--------- 160 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~G-G~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~--------- 160 (359)
++||+|||||++|+++|+.|+++ |++|+||||...+. |..+.++.+ ..+.++++|+....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~-G~~V~vlE~~~~~~~g~~~~g~~l---------~~~~l~~lg~~~~~~~~~~~~~~ 75 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRR-GLKILLVDSKPWNRIGDKPCGDAV---------SKAHFDKLGMPYPKGEELENKIN 75 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSS-SCCEEEECSSCGGGTTCSCCCCEE---------EHHHHHHTTCCCCCGGGEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCcccccccc---------cHHHHHHhcCCCCchHHHHhhhc
Confidence 58999999999999999999999 99999999987642 222222211 12345555542110
Q ss_pred -------cC-------CeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCC
Q 018188 161 -------QD-------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 226 (359)
Q Consensus 161 -------~~-------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 226 (359)
.. ......+...+.+.|.+.+. +.|++++++++|+++..+++++.+|.+.. .. +|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~-~~gv~i~~~~~v~~i~~~~~~v~gv~~~~------~~---~G~ 145 (453)
T 3atr_A 76 GIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQ-DRGVEIWDLTTAMKPIFEDGYVKGAVLFN------RR---TNE 145 (453)
T ss_dssp EEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHH-HTTCEEESSEEEEEEEEETTEEEEEEEEE------TT---TTE
T ss_pred ceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHH-HcCCEEEeCcEEEEEEEECCEEEEEEEEE------cC---CCc
Confidence 00 01123455677788887776 47999999999999998888888776631 00 112
Q ss_pred CeEEEcCEEEEcCCCCCCC
Q 018188 227 PNVMEAKIVVSSCGHDGPF 245 (359)
Q Consensus 227 ~~~i~A~~VIlAtGg~s~~ 245 (359)
..+++||.||+|+|..+..
T Consensus 146 ~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 146 ELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEECSEEEECCGGGCTT
T ss_pred eEEEEcCEEEECcCCchhh
Confidence 2479999999999987753
No 26
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.43 E-value=8.8e-13 Score=126.05 Aligned_cols=137 Identities=18% Similarity=0.192 Sum_probs=90.4
Q ss_pred ccCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCC-CCcccCCcceeeh-------------------------
Q 018188 88 TYADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPG-GGAWLGGQLFSAM------------------------- 141 (359)
Q Consensus 88 ~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~G-G~~~~~g~~~~~~------------------------- 141 (359)
.+.++||+|||||++|+++|+.|+ + |.+|+|||+...+| |.++..++.+...
T Consensus 6 ~~~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 83 (381)
T 3nyc_A 6 HPIEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFC 83 (381)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhC
Confidence 344689999999999999999999 7 99999999997665 3333222211100
Q ss_pred ----h---------cc------hhHHHHHHHcCCcceec--------------C---CeE-----EEechHHHHHHHHHH
Q 018188 142 ----V---------VR------KPAQRFLDELGVEYDEQ--------------D---NYV-----VIKHAALFTSTIMSK 180 (359)
Q Consensus 142 ----~---------~~------~~~~~~l~~~G~~~~~~--------------~---~~~-----~~~~~~~~~~~L~~~ 180 (359)
. .. ....+++.++|+++... . ... ...+...+...|.+.
T Consensus 84 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (381)
T 3nyc_A 84 EHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRG 163 (381)
T ss_dssp SSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHH
T ss_pred CcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHH
Confidence 0 00 01223344455433211 0 000 123566788888877
Q ss_pred HHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 181 LLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 181 ~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+. +.|++++++++|+++..+++. .+|.+. ..+++||.||+|+|.++
T Consensus 164 a~-~~Gv~i~~~~~V~~i~~~~~~-~~V~t~---------------~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 164 IR-RNQGQVLCNHEALEIRRVDGA-WEVRCD---------------AGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp HH-HTTCEEESSCCCCEEEEETTE-EEEECS---------------SEEEEESEEEECCGGGH
T ss_pred HH-HCCCEEEcCCEEEEEEEeCCe-EEEEeC---------------CCEEEcCEEEECCChhH
Confidence 76 579999999999999988876 345442 24799999999999543
No 27
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.43 E-value=1.5e-12 Score=125.02 Aligned_cols=136 Identities=18% Similarity=0.277 Sum_probs=90.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhc---------------------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVV--------------------------- 143 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~--------------------------- 143 (359)
++||+|||||++|+++|+.|+++ |.+|+|||+....+|.+...++.+.....
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-GEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 58999999999999999999999 99999999985443333322221110000
Q ss_pred ---------ch-------hHHHHHHHcCCcceecC--------------Ce--E-E-----EechHHHHHHHHHHHHhCC
Q 018188 144 ---------RK-------PAQRFLDELGVEYDEQD--------------NY--V-V-----IKHAALFTSTIMSKLLARP 185 (359)
Q Consensus 144 ---------~~-------~~~~~l~~~G~~~~~~~--------------~~--~-~-----~~~~~~~~~~L~~~~~~~~ 185 (359)
.. ...+++.++|+++.... .+ . + ..+...+...|.+.+. +.
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~ 162 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAK-EY 162 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHH-HT
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHH-HC
Confidence 00 11123334454332110 00 0 0 2345677777777775 67
Q ss_pred CcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 186 NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 186 gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
|++++++++|+++..+++++.+|.+. ..+++||.||+|+|.++
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~---------------~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTN---------------KGIIKTGIVVNATNAWA 205 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEET---------------TEEEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEECCEEEEEEEC---------------CcEEECCEEEECcchhH
Confidence 99999999999999888888777663 23799999999999654
No 28
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.42 E-value=1.4e-12 Score=126.71 Aligned_cols=131 Identities=23% Similarity=0.267 Sum_probs=86.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHc---------CCccee-
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDEL---------GVEYDE- 160 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~---------G~~~~~- 160 (359)
++||+|||||++|+++|+.|+++ |++|+||||...+... .|.. +.......++++ +..+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~---~g~~-----~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 75 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQKFPRFV---IGES-----LLPRCMEHLDEAGFLDAVKAQGFQQKFG 75 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCC---SCCB-----CCGGGHHHHHHTTCHHHHHHTTCEEECE
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCc---ccCc-----ccHhHHHHHHHcCChHHHHHcCCcccCC
Confidence 48999999999999999999999 9999999998754311 1111 111122223333 321110
Q ss_pred -----c---------------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEE-EEEEceeeeeccC
Q 018188 161 -----Q---------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVG-GVVTNWALVSMNH 219 (359)
Q Consensus 161 -----~---------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~-gv~~~~~~~~~~~ 219 (359)
. ..+....+...+...|.+.+. +.|++++++++|+++..+++.+. .+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~-~~gv~i~~~~~v~~i~~~~~~~~v~v~~~-------- 146 (421)
T 3nix_A 76 AKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAA-RQGVDVEYEVGVTDIKFFGTDSVTTIEDI-------- 146 (421)
T ss_dssp EEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHH-HHTCEEECSEEEEEEEEETTEEEEEEEET--------
T ss_pred cEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCEEEEEEEcC--------
Confidence 0 112234456677788777775 46999999999999998876543 22221
Q ss_pred CCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 220 DTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 220 ~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+|...+++||.||+|+|..+
T Consensus 147 ----~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 147 ----NGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp ----TSCEEEEEEEEEEECCGGGC
T ss_pred ----CCCEEEEEcCEEEECCCCch
Confidence 12234799999999999654
No 29
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.42 E-value=1.6e-12 Score=130.42 Aligned_cols=142 Identities=19% Similarity=0.240 Sum_probs=93.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceee----hhcchhHHHHHHHcCCcceec----
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSA----MVVRKPAQRFLDELGVEYDEQ---- 161 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~----~~~~~~~~~~l~~~G~~~~~~---- 161 (359)
.++||+|||||++|+++|+.|+++ |++|+||||...+.... +...... .+..-...+.+.+.+......
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liE~~~~~~~~~--g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR-GHRVLLLEREAFPRHQI--GESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCCS--CCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCEEEEccCCCCCCCC--CcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 358999999999999999999999 99999999997443211 1111110 000000112222222221110
Q ss_pred -------------------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCC
Q 018188 162 -------------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 222 (359)
Q Consensus 162 -------------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~ 222 (359)
..+.+..+...+...|.+.+. +.|++++++++|+++..+++++.+|.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~---------- 151 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSE-RKGVDVRERHEVIDVLFEGERAVGVRYRN---------- 151 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHH-HTTCEEESSCEEEEEEEETTEEEEEEEEC----------
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEECCEEEEEEEEe----------
Confidence 012233456677788777776 58999999999999999989888887641
Q ss_pred CCCCCeEEEcCEEEEcCCCCCCC
Q 018188 223 SCMDPNVMEAKIVVSSCGHDGPF 245 (359)
Q Consensus 223 ~~g~~~~i~A~~VIlAtGg~s~~ 245 (359)
.+|...+++||.||+|+|..+..
T Consensus 152 ~dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 152 TEGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp SSSCEEEEEEEEEEECCCTTCSS
T ss_pred CCCCEEEEEcCEEEECCCcchHH
Confidence 11223589999999999988754
No 30
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.42 E-value=2.2e-12 Score=133.61 Aligned_cols=137 Identities=15% Similarity=0.207 Sum_probs=90.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCC-CCcccCCcceeehhcc-------------hhHHHHHHHcCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPG-GGAWLGGQLFSAMVVR-------------KPAQRFLDELGV 156 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~G-G~~~~~g~~~~~~~~~-------------~~~~~~l~~~G~ 156 (359)
.+||||||||++|+++|+.|+++ |.+|+||||...+| |.++..++.+...... ....+++++++.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR-GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999999999999999 99999999987665 3334333222211100 012233333322
Q ss_pred cceec------------------------------------------------CCe----EEEechHHHHHHHHHHHHhC
Q 018188 157 EYDEQ------------------------------------------------DNY----VVIKHAALFTSTIMSKLLAR 184 (359)
Q Consensus 157 ~~~~~------------------------------------------------~~~----~~~~~~~~~~~~L~~~~~~~ 184 (359)
.+... ... ....+...+...|.+.+. +
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~-~ 429 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ-Q 429 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHH-H
T ss_pred CcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHH-h
Confidence 11100 000 012244667788777775 5
Q ss_pred CCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 185 PNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 185 ~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
.|++++++++|++|..+++++ .|.+. +..+++||.||+|+|+++.
T Consensus 430 ~Gv~i~~~t~V~~l~~~~~~v-~V~t~--------------~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKDDCW-LLNFA--------------GDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp TTCEEEESCCEEEEEEETTEE-EEEET--------------TSCEEEESEEEECCGGGGG
T ss_pred CCCEEEeCCeeeEEEEeCCeE-EEEEC--------------CCCEEECCEEEECCCcchh
Confidence 799999999999999988875 45542 2356999999999998763
No 31
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.41 E-value=3.2e-12 Score=125.13 Aligned_cols=138 Identities=19% Similarity=0.214 Sum_probs=91.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCCCCCcccCC--ccee-----eh--------------------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSPGGGAWLGG--QLFS-----AM-------------------- 141 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~GG~~~~~g--~~~~-----~~-------------------- 141 (359)
.++||||||||++|+++|+.|+++ |. +|+||||...+++.....+ ..+. ..
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~-G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 83 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR-GYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKN 83 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHHHhh
Confidence 458999999999999999999999 99 9999999987665432110 0000 00
Q ss_pred -------h---------cchhHHHHHHH-----cCCcce-ec---------C---------C---eE-----EEechHHH
Q 018188 142 -------V---------VRKPAQRFLDE-----LGVEYD-EQ---------D---------N---YV-----VIKHAALF 173 (359)
Q Consensus 142 -------~---------~~~~~~~~l~~-----~G~~~~-~~---------~---------~---~~-----~~~~~~~~ 173 (359)
. ......+.+.+ ++..+. .. . . +. ...+...+
T Consensus 84 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~~~~ 163 (438)
T 3dje_A 84 DPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNA 163 (438)
T ss_dssp CTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHHHH
T ss_pred CccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecHHHH
Confidence 0 00111122221 132220 00 0 0 00 12234577
Q ss_pred HHHHHHHHHhCCCcEEEcce---eeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 174 TSTIMSKLLARPNVKLFNAV---AAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 174 ~~~L~~~~~~~~gv~i~~~~---~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...|.+.+. +.|++|++++ +|++|..+++++.+|.+. +..+++||.||+|+|+++
T Consensus 164 ~~~L~~~a~-~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~--------------~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 164 LVAAAREAQ-RMGVKFVTGTPQGRVVTLIFENNDVKGAVTA--------------DGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHH-HTTCEEEESTTTTCEEEEEEETTEEEEEEET--------------TTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHH-hcCCEEEeCCcCceEEEEEecCCeEEEEEEC--------------CCCEEECCEEEECCCCCh
Confidence 888877775 6799999999 999999988899888874 235899999999999775
No 32
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.41 E-value=1.6e-12 Score=125.72 Aligned_cols=131 Identities=19% Similarity=0.337 Sum_probs=87.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCC---------cce--
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGV---------EYD-- 159 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~-- 159 (359)
++||+|||||++|+++|+.|++. |++|+|+||...+.. ...+. .+.....+.++++|+ ++.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~~~~--~~~~~-----~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARRERA--INGAD-----LLKPAGIRVVEAAGLLAEVTRRGGRVRHE 77 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCC-----CCCC-----EECHHHHHHHHHTTCHHHHHHTTCEEECE
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCCc--cCcee-----eECchHHHHHHHcCcHHHHHHhCCCccee
Confidence 58999999999999999999999 999999999865411 11111 122223344444443 111
Q ss_pred ----ecC--------------CeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEE-EEEEceeeeeccCC
Q 018188 160 ----EQD--------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVG-GVVTNWALVSMNHD 220 (359)
Q Consensus 160 ----~~~--------------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~-gv~~~~~~~~~~~~ 220 (359)
..+ .+....+...+.+.|.+.+.+..|++++++++|+++..+++.+. .|...
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~--------- 148 (399)
T 2x3n_A 78 LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLN--------- 148 (399)
T ss_dssp EEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEET---------
T ss_pred EEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEEC---------
Confidence 000 11123455677788777775333999999999999988777653 34442
Q ss_pred CCCCCCCeEEEcCEEEEcCCCCC
Q 018188 221 TQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 221 ~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+++||.||+|+|.++
T Consensus 149 -----~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 149 -----DGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp -----TSCEEEEEEEEECCCTTC
T ss_pred -----CCCEEECCEEEECCCCCh
Confidence 124799999999999776
No 33
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.39 E-value=3.8e-12 Score=127.35 Aligned_cols=134 Identities=19% Similarity=0.177 Sum_probs=91.3
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcc----------
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEY---------- 158 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~---------- 158 (359)
+.++||+|||||++|+++|+.|+++ |++|+||||...++... ....+.....+.|+++|+.-
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~-------r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~ 80 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVERTGES-------RGLGFTARTMEVFDQRGILPRFGEVETSTQ 80 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC-CCCC-------CSEEECHHHHHHHHTTTCGGGGCSCCBCCE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCC-------CcceECHHHHHHHHHCCCHHHHHhcccccc
Confidence 4468999999999999999999999 99999999987654211 11223344555666655421
Q ss_pred --------eec-----CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCC
Q 018188 159 --------DEQ-----DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCM 225 (359)
Q Consensus 159 --------~~~-----~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g 225 (359)
+.. ..+....+...+.+.|.+.+. +.|++++++++|+++..+++.|. +...+ + .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~~~-------~---~g 148 (500)
T 2qa1_A 81 GHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWAT-GLGADIRRGHEVLSLTDDGAGVT-VEVRG-------P---EG 148 (500)
T ss_dssp EEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHH-HTTCEEEETCEEEEEEEETTEEE-EEEEE-------T---TE
T ss_pred ccccceecccccCCCCCCceeecCHHHHHHHHHHHHH-HCCCEEECCcEEEEEEEcCCeEE-EEEEc-------C---CC
Confidence 000 011233445566677777665 56999999999999999888765 43321 0 01
Q ss_pred CCeEEEcCEEEEcCCCCC
Q 018188 226 DPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 226 ~~~~i~A~~VIlAtGg~s 243 (359)
..+++||+||.|+|.+|
T Consensus 149 -~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 149 -KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp -EEEEEESEEEECCCTTC
T ss_pred -CEEEEeCEEEECCCcch
Confidence 24799999999999776
No 34
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.38 E-value=5.1e-12 Score=126.40 Aligned_cols=134 Identities=24% Similarity=0.240 Sum_probs=92.7
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcc----------
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEY---------- 158 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~---------- 158 (359)
+.++||+|||||++|+++|+.|+++ |++|+||||...++... ....+.....+.|+++|+.-
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~-------r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~ 81 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQRTGES-------RGLGFTARTMEVFDQRGILPAFGPVETSTQ 81 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSSCCCCC-------CSEEECHHHHHHHHHTTCGGGGCSCCEESE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCC-------ceeEECHHHHHHHHHCCCHHHHHhcccccc
Confidence 3468999999999999999999999 99999999987654211 11223445566677666521
Q ss_pred --------eec-----CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCC
Q 018188 159 --------DEQ-----DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCM 225 (359)
Q Consensus 159 --------~~~-----~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g 225 (359)
+.. ..+....+...+.+.|.+.+. +.|++++++++|+++..+++.|. +.+.+ + .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~~~-------~---~g 149 (499)
T 2qa2_A 82 GHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWAL-GRGAELLRGHTVRALTDEGDHVV-VEVEG-------P---DG 149 (499)
T ss_dssp EEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHH-HTTCEEEESCEEEEEEECSSCEE-EEEEC-------S---SC
T ss_pred ceecceecccccCCCCCCceEecCHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCEEE-EEEEc-------C---CC
Confidence 000 012233455667777777765 56999999999999998877665 43321 1 11
Q ss_pred CCeEEEcCEEEEcCCCCC
Q 018188 226 DPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 226 ~~~~i~A~~VIlAtGg~s 243 (359)
..+++||+||.|+|.+|
T Consensus 150 -~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 150 -PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp -EEEEEEEEEEECCCTTC
T ss_pred -cEEEEeCEEEEccCccc
Confidence 24799999999999776
No 35
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.38 E-value=6.3e-12 Score=126.61 Aligned_cols=133 Identities=18% Similarity=0.159 Sum_probs=88.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCC---------ccee
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGV---------EYDE 160 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~~ 160 (359)
.++||+|||||++|+++|+.|+++ |++|+||||...++.... ...+.....+.++++|+ ++..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~~~~~~~-------~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~ 75 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPGLSPYPR-------AAGQNPRTMELLRIGGVADEVVRADDIRGT 75 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSSCCCCCC-------SCCBCHHHHHHHHHTTCHHHHHHSCCSSCT
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCc-------cceECHHHHHHHHHcCCHHHHHhhCCCccc
Confidence 358999999999999999999999 999999999876532111 11123334444544443 1110
Q ss_pred c------------C-Ce---------------------EEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCC---
Q 018188 161 Q------------D-NY---------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--- 203 (359)
Q Consensus 161 ~------------~-~~---------------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~--- 203 (359)
. + .+ ....+...+...|.+.+. +.|++++++++|+++..+++
T Consensus 76 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~-~~gv~i~~~~~v~~i~~~~~~~~ 154 (535)
T 3ihg_A 76 QGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQAR-KHGGAIRFGTRLLSFRQHDDDAG 154 (535)
T ss_dssp TSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHH-HTTCEEESSCEEEEEEEECGGGC
T ss_pred ccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEECCCCcc
Confidence 0 0 00 111234566677777776 45999999999999998876
Q ss_pred -EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 204 -RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 204 -~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+... ..+ .+ ...+++||+||.|+|.++
T Consensus 155 ~~v~v~-~~~------~~-----~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 155 AGVTAR-LAG------PD-----GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp SEEEEE-EEE------TT-----EEEEEEEEEEEECCCTTC
T ss_pred ccEEEE-EEc------CC-----CeEEEEeCEEEECCCCcc
Confidence 65532 221 00 026799999999999776
No 36
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.37 E-value=5.5e-12 Score=122.40 Aligned_cols=131 Identities=16% Similarity=0.171 Sum_probs=87.4
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCC---------cce
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGV---------EYD 159 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~ 159 (359)
..++||+|||||++|+++|+.|+++ |++|+|+||...++... ....+.....+.++++|+ +..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~~-------~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~ 92 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKEIKPVG-------AAISVWPNGVKCMAHLGMGDIMETFGGPLR 92 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSCC-----------CEEEECHHHHHHHHHTTCHHHHHHHSCCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcC-------eeEEECHHHHHHHHHCCCHHHHHhhcCCCc
Confidence 3468999999999999999999999 99999999987653210 111223344455555554 111
Q ss_pred -----ecC------------------CeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeee
Q 018188 160 -----EQD------------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 216 (359)
Q Consensus 160 -----~~~------------------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~ 216 (359)
... ...+..+...+.+.|.+.+. + ++++++++|+++..+++.+. +...
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-~--~~i~~~~~v~~i~~~~~~v~-v~~~----- 163 (407)
T 3rp8_A 93 RMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWG-R--DSVQFGKRVTRCEEDADGVT-VWFT----- 163 (407)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHC-G--GGEEESCCEEEEEEETTEEE-EEET-----
T ss_pred ceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCC-c--CEEEECCEEEEEEecCCcEE-EEEc-----
Confidence 000 11122344566677776664 3 89999999999998887654 3332
Q ss_pred ccCCCCCCCCCeEEEcCEEEEcCCCCCCC
Q 018188 217 MNHDTQSCMDPNVMEAKIVVSSCGHDGPF 245 (359)
Q Consensus 217 ~~~~~~~~g~~~~i~A~~VIlAtGg~s~~ 245 (359)
++.+++||+||.|+|.++..
T Consensus 164 ---------~g~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 164 ---------DGSSASGDLLIAADGSHSAL 183 (407)
T ss_dssp ---------TSCEEEESEEEECCCTTCSS
T ss_pred ---------CCCEEeeCEEEECCCcChHH
Confidence 23579999999999988753
No 37
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.37 E-value=3.6e-12 Score=129.33 Aligned_cols=143 Identities=22% Similarity=0.276 Sum_probs=91.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeeh----------hcch--------------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAM----------VVRK-------------- 145 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~----------~~~~-------------- 145 (359)
.++||+|||||++|+.+|+.|+++ |++|+||||+...+|.+.....+.+.- +...
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~-G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~ 95 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVR-GIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPH 95 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCch
Confidence 469999999999999999999999 999999999977766654433221100 0000
Q ss_pred ---------------hHHHHHHHcCCc----------------------------ceec---CCeE---EEechHHHHHH
Q 018188 146 ---------------PAQRFLDELGVE----------------------------YDEQ---DNYV---VIKHAALFTST 176 (359)
Q Consensus 146 ---------------~~~~~l~~~G~~----------------------------~~~~---~~~~---~~~~~~~~~~~ 176 (359)
....+....+.. +... ..+. ...+...+...
T Consensus 96 l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~~~ 175 (561)
T 3da1_A 96 VTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLE 175 (561)
T ss_dssp TCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHHHH
T ss_pred hccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHHHH
Confidence 000010000100 0000 0000 12345667777
Q ss_pred HHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 177 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 177 L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
|.+.+. +.|++++++++|+++..+++++.+|.+.+. .++...+++||.||+|+|.++
T Consensus 176 L~~~a~-~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~---------~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 176 IMKEAV-ARGAVALNYMKVESFIYDQGKVVGVVAKDR---------LTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEEEETTEEEEEEEEET---------TTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHH-HcCCEEEcCCEEEEEEEcCCeEEEEEEEEc---------CCCceEEEECCEEEECCCcch
Confidence 777775 679999999999999999999888877521 112346899999999999543
No 38
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.36 E-value=4.4e-12 Score=122.44 Aligned_cols=137 Identities=20% Similarity=0.237 Sum_probs=89.4
Q ss_pred CcccEEEECCChHHHHHHHHhhc-CCC-CeEEEEeeccCCCCCcccCCcceeehhcc-----------------------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISK-NPS-IRVAIIEQSVSPGGGAWLGGQLFSAMVVR----------------------- 144 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~-~~G-~~V~vlEk~~~~GG~~~~~g~~~~~~~~~----------------------- 144 (359)
.++||+|||||++|+++|+.|++ + | .+|+|||+....+|.+...++.+......
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~-G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 98 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNH-GITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEY 98 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHH-CCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhc-CCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999999 9 9 99999999985554443332221110000
Q ss_pred ---------------h-------hHHHHHHHcCCcceec---------C----------Ce--EE------EechHHHHH
Q 018188 145 ---------------K-------PAQRFLDELGVEYDEQ---------D----------NY--VV------IKHAALFTS 175 (359)
Q Consensus 145 ---------------~-------~~~~~l~~~G~~~~~~---------~----------~~--~~------~~~~~~~~~ 175 (359)
. ...+++.+.|+++... . .+ .. ..+...+..
T Consensus 99 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (405)
T 2gag_B 99 DFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAW 178 (405)
T ss_dssp CCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHH
T ss_pred CcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHHH
Confidence 0 0112223334332210 0 00 00 123446777
Q ss_pred HHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 176 TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 176 ~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.|.+.+. +.|++++++++|+++..+++++.+|.+. ..+++||.||+|+|.++
T Consensus 179 ~l~~~~~-~~g~~i~~~~~v~~i~~~~~~~~~v~~~---------------~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 179 AFARKAN-EMGVDIIQNCEVTGFIKDGEKVTGVKTT---------------RGTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHH-HTTCEEECSCCEEEEEESSSBEEEEEET---------------TCCEEEEEEEECCGGGH
T ss_pred HHHHHHH-HCCCEEEcCCeEEEEEEeCCEEEEEEeC---------------CceEECCEEEECCchhH
Confidence 7777775 5799999999999999887777777653 12699999999999654
No 39
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.35 E-value=9e-12 Score=129.38 Aligned_cols=138 Identities=13% Similarity=0.115 Sum_probs=88.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCC-CcccCCcceeehhcc-------------hhHHHHHHHc-
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGG-GAWLGGQLFSAMVVR-------------KPAQRFLDEL- 154 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG-~~~~~g~~~~~~~~~-------------~~~~~~l~~~- 154 (359)
.++||||||||++|+++|+.|+++ |.+|+||||...+|+ .+...++.+...... ....++++++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~ 341 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLL 341 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 458999999999999999999999 999999999876653 333333222211000 0111222221
Q ss_pred --------------------------------CCcce---ec---------------CCeE----EEechHHHHHHHHHH
Q 018188 155 --------------------------------GVEYD---EQ---------------DNYV----VIKHAALFTSTIMSK 180 (359)
Q Consensus 155 --------------------------------G~~~~---~~---------------~~~~----~~~~~~~~~~~L~~~ 180 (359)
|++.. .. .... ...+...+...|.+.
T Consensus 342 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~ 421 (689)
T 3pvc_A 342 EQGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMML 421 (689)
T ss_dssp HTTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHH
T ss_pred hhccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHH
Confidence 21111 00 0000 022456777887777
Q ss_pred HHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCe-EEEcCEEEEcCCCCCC
Q 018188 181 LLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN-VMEAKIVVSSCGHDGP 244 (359)
Q Consensus 181 ~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~-~i~A~~VIlAtGg~s~ 244 (359)
+. +.|++|+++++|++|..+++++ .|.+. ++. +++||.||+|+|+++.
T Consensus 422 a~-~~Gv~i~~~t~V~~l~~~~~~v-~V~t~--------------~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 422 AQ-QNGMTCHYQHELQRLKRIDSQW-QLTFG--------------QSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HH-HTTCEEEESCCEEEEEECSSSE-EEEEC---------------CCCCEEESEEEECCGGGTT
T ss_pred HH-hCCCEEEeCCeEeEEEEeCCeE-EEEeC--------------CCcEEEECCEEEECCCcchh
Confidence 75 5799999999999999887764 34442 123 6999999999998764
No 40
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.35 E-value=4.5e-12 Score=129.26 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=90.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCC---------ccee
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGV---------EYDE 160 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~~ 160 (359)
.++||||||||++|+++|+.|++. |++|+|||+...++... | ..+.+....+++.+|+ ....
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~-G~~V~LiEr~~~~~~~~---G-----~~l~p~~~~~l~~lGl~~~l~~~~~~~~~ 92 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKL-GHDVTIYERSAFPRYRV---G-----ESLLPGTMSILNRLGLQEKIDAQNYVKKP 92 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSSCCCC---C-----CBCCHHHHHHHHHTTCHHHHHHHCCEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcC-CCCEEEEcCCCCCCCce---e-----eeECHHHHHHHHHcCCcHHHHhcCCcccC
Confidence 368999999999999999999999 99999999987654321 1 1122233444444444 1100
Q ss_pred ------c-------------------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeee
Q 018188 161 ------Q-------------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV 215 (359)
Q Consensus 161 ------~-------------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~ 215 (359)
. ..+....+...+...|.+.+. +.|++++++++|+++..+++.+.+|.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~--- 168 (591)
T 3i3l_A 93 SATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEAR-SRGITVHEETPVTDVDLSDPDRVVLTVRR--- 168 (591)
T ss_dssp EEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHH-HTTCEEETTCCEEEEECCSTTCEEEEEEE---
T ss_pred CcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCEEEEEEec---
Confidence 0 011223455677777777775 58999999999999987656556666531
Q ss_pred eccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 216 SMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 216 ~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+|...+++||.||+|+|..+
T Consensus 169 --------~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 169 --------GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp --------TTEEEEEEESEEEECCGGGC
T ss_pred --------CCceEEEEcCEEEECCCCcc
Confidence 11225799999999999655
No 41
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.35 E-value=4.3e-12 Score=122.57 Aligned_cols=134 Identities=22% Similarity=0.315 Sum_probs=87.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCC--CCcccCCcceeeh---------------------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPG--GGAWLGGQLFSAM--------------------------- 141 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~G--G~~~~~g~~~~~~--------------------------- 141 (359)
++||+|||||++|+++|+.|+++ |.+|+||||....+ |.+......+...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCcc
Confidence 48999999999999999999999 99999999987654 3332211111000
Q ss_pred -------h------------cchhHHHHHHHcCCcceec---------C------Ce-E------EEechHHHHHHHHHH
Q 018188 142 -------V------------VRKPAQRFLDELGVEYDEQ---------D------NY-V------VIKHAALFTSTIMSK 180 (359)
Q Consensus 142 -------~------------~~~~~~~~l~~~G~~~~~~---------~------~~-~------~~~~~~~~~~~L~~~ 180 (359)
+ ......+++.+.|+++... . .. . ...+...+...|.+.
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 162 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTL 162 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHH
Confidence 0 0001223444455543210 0 00 0 022345677777777
Q ss_pred HHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 181 LLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 181 ~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
+. +.|++++++++|+++..+++.+. |.+. ..+++||.||+|+|++
T Consensus 163 a~-~~Gv~i~~~~~V~~i~~~~~~v~-v~t~---------------~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 163 AQ-AAGATLRAGETVTELVPDADGVS-VTTD---------------RGTYRAGKVVLACGPY 207 (397)
T ss_dssp HH-HTTCEEEESCCEEEEEEETTEEE-EEES---------------SCEEEEEEEEECCGGG
T ss_pred HH-HcCCEEECCCEEEEEEEcCCeEE-EEEC---------------CCEEEcCEEEEcCCcC
Confidence 65 57999999999999998877654 4332 2479999999999954
No 42
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.35 E-value=1e-11 Score=119.42 Aligned_cols=126 Identities=20% Similarity=0.200 Sum_probs=87.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcce-----------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYD----------- 159 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~----------- 159 (359)
.+||+|||||++|+++|+.|++. |++|+|+||...+++.. . ...+.....+.++++|+.-.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~~~~~~--~-----~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSELRAFG--A-----GIYLWHNGLRVLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSCCCCS--S-----EEEEEHHHHHHHHHTTCHHHHHTTCBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCCCCCCC--c-----eEEeCccHHHHHHHcCCHHHHHhhCCCccce
Confidence 58999999999999999999999 99999999988765311 1 11223344455555554100
Q ss_pred ---ec----------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCC
Q 018188 160 ---EQ----------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 226 (359)
Q Consensus 160 ---~~----------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 226 (359)
.. .......+...+.+.|.+.+. +.|++++++++|+++.. ++ .|... +
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~gv~i~~~~~v~~i~~-~~---~v~~~--------------~ 143 (379)
T 3alj_A 83 ETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRAR-ALGVDISVNSEAVAADP-VG---RLTLQ--------------T 143 (379)
T ss_dssp EEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHH-HTTCEEESSCCEEEEET-TT---EEEET--------------T
T ss_pred EEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHH-hcCCEEEeCCEEEEEEe-CC---EEEEC--------------C
Confidence 00 001223445677778777776 46999999999999976 44 34442 1
Q ss_pred CeEEEcCEEEEcCCCCC
Q 018188 227 PNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 227 ~~~i~A~~VIlAtGg~s 243 (359)
+.+++||.||+|+|..+
T Consensus 144 g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 144 GEVLEADLIVGADGVGS 160 (379)
T ss_dssp SCEEECSEEEECCCTTC
T ss_pred CCEEEcCEEEECCCccH
Confidence 35799999999999776
No 43
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.34 E-value=6.1e-12 Score=120.56 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=87.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhc---c-------hhHH-------HHH-
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVV---R-------KPAQ-------RFL- 151 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~---~-------~~~~-------~~l- 151 (359)
.++||+|||||++|+++|+.|+++ |.+|+|||+....+|.+..+++.+..... . .... +.+
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELY 94 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999999 99999999987665554443333221110 0 0000 001
Q ss_pred HHcCCcce--ec----------------------------------------CC----eE----EEechHHHHHHHHHHH
Q 018188 152 DELGVEYD--EQ----------------------------------------DN----YV----VIKHAALFTSTIMSKL 181 (359)
Q Consensus 152 ~~~G~~~~--~~----------------------------------------~~----~~----~~~~~~~~~~~L~~~~ 181 (359)
+..+..+. .. .. +. ...+...+...|.+.+
T Consensus 95 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (382)
T 1ryi_A 95 ALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAA 174 (382)
T ss_dssp HHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHHHH
T ss_pred HhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHHHH
Confidence 11122110 00 00 00 0123456777777777
Q ss_pred HhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 182 LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 182 ~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
. +.|++++++++|+++..+++++ +|.+. ..+++||.||+|+|.++
T Consensus 175 ~-~~g~~i~~~~~v~~i~~~~~~~-~v~~~---------------~g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 175 K-MLGAEIFEHTPVLHVERDGEAL-FIKTP---------------SGDVWANHVVVASGVWS 219 (382)
T ss_dssp H-HTTCEEETTCCCCEEECSSSSE-EEEET---------------TEEEEEEEEEECCGGGT
T ss_pred H-HCCCEEEcCCcEEEEEEECCEE-EEEcC---------------CceEEcCEEEECCChhH
Confidence 5 5799999999999998777766 55542 23799999999999654
No 44
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.34 E-value=3e-12 Score=123.53 Aligned_cols=135 Identities=19% Similarity=0.136 Sum_probs=87.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcce-----------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYD----------- 159 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~----------- 159 (359)
++||+|||||++|+++|+.|++. |++|+|+||...+.+....+++ .+.....+.|+++|+.-.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~~~~g-----~l~~~~~~~l~~lg~~~~~~~~~~~~~~~ 75 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTPDYVLGRIRAG-----VLEQGMVDLLREAGVDRRMARDGLVHEGV 75 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSCHHHHHTCCCCC-----EECHHHHHHHHHTTCCHHHHHHCEEESCE
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCcccCCCceE-----eECHHHHHHHHHcCCcHHHHhcCCccceE
Confidence 47999999999999999999999 9999999998642100001111 123345556666665210
Q ss_pred ---ec-------------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEE-ceeeeeccCCC
Q 018188 160 ---EQ-------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVT-NWALVSMNHDT 221 (359)
Q Consensus 160 ---~~-------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~-~~~~~~~~~~~ 221 (359)
.. .......+...+.+.|.+.+. +.|++++++++|+++..++ +.+. |.. .+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~g~~i~~~~~v~~i~~~~~~~~~-v~~~~~--------- 144 (394)
T 1k0i_A 76 EIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEARE-ACGATTVYQAAEVRLHDLQGERPY-VTFERD--------- 144 (394)
T ss_dssp EEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHH-HTTCEEESSCEEEEEECTTSSSCE-EEEEET---------
T ss_pred EEEECCceEEeccccccCCCceEEechHHHHHHHHHHHH-hcCCeEEeceeEEEEEEecCCceE-EEEecC---------
Confidence 00 001112234556677777776 4699999999999998754 3332 333 11
Q ss_pred CCCCCCeEEEcCEEEEcCCCCCCC
Q 018188 222 QSCMDPNVMEAKIVVSSCGHDGPF 245 (359)
Q Consensus 222 ~~~g~~~~i~A~~VIlAtGg~s~~ 245 (359)
|...+++||.||.|+|.++..
T Consensus 145 ---g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 145 ---GERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp ---TEEEEEECSEEEECCCTTCST
T ss_pred ---CcEEEEEeCEEEECCCCCcHH
Confidence 112379999999999988864
No 45
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.33 E-value=2.2e-11 Score=123.97 Aligned_cols=137 Identities=22% Similarity=0.264 Sum_probs=88.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc-CCCCC-ccc-CCcceeehhcc------hhHHHHHHHcCCcceec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV-SPGGG-AWL-GGQLFSAMVVR------KPAQRFLDELGVEYDEQ 161 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~-~~GG~-~~~-~g~~~~~~~~~------~~~~~~l~~~G~~~~~~ 161 (359)
+|||||||||++|+.||+.|++. |++|+|||+.. .+|.. |.. .|+.....+.+ .....+++..++.|...
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 58999999999999999999999 99999999984 44431 111 01110000000 01122333344444321
Q ss_pred C--------CeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcC
Q 018188 162 D--------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 233 (359)
Q Consensus 162 ~--------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~ 233 (359)
. ......+...+...|.+.+.+..|++++ +++|+++..+++++.+|.+. ++.++.|+
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~--------------dG~~i~Ad 170 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTN--------------LGVEYKTK 170 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEET--------------TSCEEECS
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEEC--------------CCcEEEeC
Confidence 1 0112334556677776666544799995 56999998888889888774 23679999
Q ss_pred EEEEcCCCCC
Q 018188 234 IVVSSCGHDG 243 (359)
Q Consensus 234 ~VIlAtGg~s 243 (359)
.||+|||+++
T Consensus 171 aVVLATG~~s 180 (637)
T 2zxi_A 171 AVVVTTGTFL 180 (637)
T ss_dssp EEEECCTTCB
T ss_pred EEEEccCCCc
Confidence 9999999864
No 46
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.32 E-value=2.5e-11 Score=117.43 Aligned_cols=129 Identities=22% Similarity=0.273 Sum_probs=86.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcc------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEY------------ 158 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~------------ 158 (359)
.+||+|||||++|+++|+.|++. |++|+|+||...+... .+. ...+.+...+.|+++|+..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~--~~~----g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQPLSG--FGT----GIVVQPELVHYLLEQGVELDSISVPSSSMEY 77 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCCC--CSC----EEECCHHHHHHHHHTTCCGGGTCBCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCc--ccc----ccccChhHHHHHHHcCCccccccccccceEE
Confidence 58999999999999999999999 9999999998753111 011 1223455677888887632
Q ss_pred -ee-cCCeEE-------EechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeE
Q 018188 159 -DE-QDNYVV-------IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV 229 (359)
Q Consensus 159 -~~-~~~~~~-------~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~ 229 (359)
+. .+.... ..+...+.+.|.+.+ .|++++++++|+++..+++.+. |... ++.+
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~--------------~g~~ 139 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSETVQ-MRFS--------------DGTK 139 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSCEE-EEET--------------TSCE
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCEEE-EEEC--------------CCCE
Confidence 00 000000 112234555554443 4899999999999988777654 4332 2357
Q ss_pred EEcCEEEEcCCCCCC
Q 018188 230 MEAKIVVSSCGHDGP 244 (359)
Q Consensus 230 i~A~~VIlAtGg~s~ 244 (359)
++||+||.|+|.++.
T Consensus 140 ~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 140 AEANWVIGADGGASV 154 (397)
T ss_dssp EEESEEEECCCTTCH
T ss_pred EECCEEEECCCcchh
Confidence 999999999997763
No 47
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.30 E-value=3.2e-11 Score=123.10 Aligned_cols=138 Identities=25% Similarity=0.332 Sum_probs=87.9
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc-CCCCC-ccc-CCcceeehhc------chhHHHHHHHcCCccee
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV-SPGGG-AWL-GGQLFSAMVV------RKPAQRFLDELGVEYDE 160 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~-~~GG~-~~~-~g~~~~~~~~------~~~~~~~l~~~G~~~~~ 160 (359)
.+|||||||||++|++||+.|++. |.+|+|||+.. .+|.. |.. .++.....+. ......+.+..++.|..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 359999999999999999999999 99999999974 34321 110 0110000000 00112233333444432
Q ss_pred cC--------CeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEc
Q 018188 161 QD--------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 232 (359)
Q Consensus 161 ~~--------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A 232 (359)
.. ......+...+...+.+.+.+..|++++ +++|+++..+++++.+|.+. ++.++.|
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~--------------dG~~I~A 170 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQ--------------MGLKFRA 170 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEET--------------TSEEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEEC--------------CCCEEEC
Confidence 11 0112234456667766666533799995 56999998888888888774 2367999
Q ss_pred CEEEEcCCCCC
Q 018188 233 KIVVSSCGHDG 243 (359)
Q Consensus 233 ~~VIlAtGg~s 243 (359)
|.||+|||+++
T Consensus 171 d~VVLATGt~s 181 (651)
T 3ces_A 171 KAVVLTVGTFL 181 (651)
T ss_dssp EEEEECCSTTT
T ss_pred CEEEEcCCCCc
Confidence 99999999875
No 48
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.30 E-value=1e-11 Score=126.62 Aligned_cols=145 Identities=22% Similarity=0.302 Sum_probs=92.1
Q ss_pred cccEEEECCChHHHHHHHHhhcC-----CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceec----
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKN-----PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQ---- 161 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~-----~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~---- 161 (359)
++||||||||++|+++|+.|++. +|++|+||||...+|+....++.+ ....+.. ....+.+.+.++...
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l-~~~~l~~-ll~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACL-DPRAFEE-LFPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEE-CTHHHHH-HCTTHHHHTCCCCEECCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcccccccc-CHHHHHH-HHHHHHhcCCceeeeechh
Confidence 48999999999999999999875 289999999998887654333322 1111100 000111222221100
Q ss_pred ------C----------------CeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeecc
Q 018188 162 ------D----------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMN 218 (359)
Q Consensus 162 ------~----------------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~ 218 (359)
. ...+..+...+.+.|.+.+. +.|++|+++++|+++..++ +++.+|.+.+... +
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~--~ 189 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAE-ALGVEVYPGYAAAEILFHEDGSVKGIATNDVGI--Q 189 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHH-HTTCEEETTCCEEEEEECTTSSEEEEEECCEEE--C
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHH-HcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccc--c
Confidence 0 00122344567788877776 5699999999999998875 5687787642000 0
Q ss_pred CCCCCCCC-------CeEEEcCEEEEcCCCCCC
Q 018188 219 HDTQSCMD-------PNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 219 ~~~~~~g~-------~~~i~A~~VIlAtGg~s~ 244 (359)
. +|. ..+++||+||+|+|.++.
T Consensus 190 ~----~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 190 K----DGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp T----TSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred C----CCCcccccCCceEEECCEEEEeeCCCch
Confidence 0 111 257999999999998874
No 49
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.29 E-value=4.2e-11 Score=116.41 Aligned_cols=39 Identities=33% Similarity=0.480 Sum_probs=36.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
+||||||||++||+||+.|+++ |.+|+|||++..+||.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-GHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCceEEEeCCCCCCCce
Confidence 4899999999999999999999 99999999999998765
No 50
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.29 E-value=2.4e-11 Score=116.61 Aligned_cols=135 Identities=18% Similarity=0.225 Sum_probs=87.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCC--CCcccCCcceeehh----------c---------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPG--GGAWLGGQLFSAMV----------V--------------- 143 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~G--G~~~~~g~~~~~~~----------~--------------- 143 (359)
++||+|||||++|+++|+.|+++ |.+|+|||+....+ |.++..+..+.... .
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999999 99999999987665 44432221111000 0
Q ss_pred ---------------c----hhHHHHHHHcCCcceec---------C-----Ce--E------EEechHHHHHHHHHHHH
Q 018188 144 ---------------R----KPAQRFLDELGVEYDEQ---------D-----NY--V------VIKHAALFTSTIMSKLL 182 (359)
Q Consensus 144 ---------------~----~~~~~~l~~~G~~~~~~---------~-----~~--~------~~~~~~~~~~~L~~~~~ 182 (359)
. ....+++...|+++... . .. . ...+...+...|.+.+.
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 0 01112333344432110 0 00 0 12234677788777775
Q ss_pred hCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 183 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 183 ~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+.|++++++++|+++..+++.+. |.+. ..+++||.||+|+|.++
T Consensus 162 -~~Gv~i~~~~~v~~i~~~~~~~~-v~~~---------------~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 162 -ARGAKVLTHTRVEDFDISPDSVK-IETA---------------NGSYTADKLIVSMGAWN 205 (389)
T ss_dssp -HTTCEEECSCCEEEEEECSSCEE-EEET---------------TEEEEEEEEEECCGGGH
T ss_pred -HCCCEEEcCcEEEEEEecCCeEE-EEeC---------------CCEEEeCEEEEecCccH
Confidence 57999999999999988766543 4332 24799999999999543
No 51
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.29 E-value=7.9e-12 Score=127.02 Aligned_cols=132 Identities=20% Similarity=0.213 Sum_probs=87.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCc------------
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVE------------ 157 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~------------ 157 (359)
.++||+|||||++|+++|+.|+++ |++|+||||...+.... ....+.....+.|+++|+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~~~~~~-------r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~ 119 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVEPVGHD-------RAGALHIRTVETLDLRGLLDRFLEGTQVAKG 119 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSSCCCSS-------SCCCBCHHHHHHHHTTTCHHHHTTSCCBCSB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCCCCCCc-------eEEEECHHHHHHHHHcCChHHHHhcCcccCC
Confidence 458999999999999999999999 99999999987653211 1112233344455544431
Q ss_pred --c--------eec-----CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCC
Q 018188 158 --Y--------DEQ-----DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 222 (359)
Q Consensus 158 --~--------~~~-----~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~ 222 (359)
| +.. ..+.+..+...+...|.+.+. +.|++|+++++|+++..+++.+. |.+.. .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~-~~gv~i~~~~~v~~l~~~~~~v~-v~~~~-------~-- 188 (570)
T 3fmw_A 120 LPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAR-EAGAEIPRGHEVTRLRQDAEAVE-VTVAG-------P-- 188 (570)
T ss_dssp CCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHH-HHTEECCBSCEEEECCBCSSCEE-EEEEE-------T--
T ss_pred ceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCeEE-EEEEe-------C--
Confidence 1 000 011223455667777777765 46999999999999988777655 33310 0
Q ss_pred CCCCC-eEEEcCEEEEcCCCCC
Q 018188 223 SCMDP-NVMEAKIVVSSCGHDG 243 (359)
Q Consensus 223 ~~g~~-~~i~A~~VIlAtGg~s 243 (359)
++ .+++||+||.|+|.++
T Consensus 189 ---~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 189 ---SGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp ---TEEEEEEESEEEECSCSSC
T ss_pred ---CCcEEEEeCEEEEcCCCCc
Confidence 12 5799999999999766
No 52
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.28 E-value=4.3e-11 Score=115.84 Aligned_cols=134 Identities=16% Similarity=0.230 Sum_probs=83.1
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCc---------ce
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVE---------YD 159 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~---------~~ 159 (359)
+.++||+|||||++|+++|+.|++. |++|+|+||...++... .++. +.- ......+.|+++|+. ..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~-~g~~-~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~ 98 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDNDREARI-FGGT-LDL--HKGSGQEAMKKAGLLQTYYDLALPMG 98 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSSTTCCC-CSCC-EEC--CTTTHHHHHHHTTCHHHHHHHCBCCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCccccc-cCCe-eee--CCccHHHHHHhcChHHHHHHhhcccc
Confidence 4468999999999999999999999 99999999987654321 1111 110 001123344444431 00
Q ss_pred ----ecCCeE--------------EEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCC
Q 018188 160 ----EQDNYV--------------VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT 221 (359)
Q Consensus 160 ----~~~~~~--------------~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~ 221 (359)
...... ...+...+.+.|.+.+ .+++++++++|+++..+++.+. |...
T Consensus 99 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~---------- 164 (398)
T 2xdo_A 99 VNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSL---ENDTVIWDRKLVMLEPGKKKWT-LTFE---------- 164 (398)
T ss_dssp EEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTS---CTTSEEESCCEEEEEECSSSEE-EEET----------
T ss_pred eEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhc---CCCEEEECCEEEEEEECCCEEE-EEEC----------
Confidence 000000 1123344555555443 2368899999999988766553 4332
Q ss_pred CCCCCCeEEEcCEEEEcCCCCCCC
Q 018188 222 QSCMDPNVMEAKIVVSSCGHDGPF 245 (359)
Q Consensus 222 ~~~g~~~~i~A~~VIlAtGg~s~~ 245 (359)
++.+++||+||+|+|.++..
T Consensus 165 ----~g~~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 165 ----NKPSETADLVILANGGMSKV 184 (398)
T ss_dssp ----TSCCEEESEEEECSCTTCSC
T ss_pred ----CCcEEecCEEEECCCcchhH
Confidence 12469999999999988854
No 53
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.26 E-value=2.5e-11 Score=123.80 Aligned_cols=137 Identities=18% Similarity=0.300 Sum_probs=89.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc-CCCCCccc--CCcceeehhcc------hhHHHHHHHcCCcceec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV-SPGGGAWL--GGQLFSAMVVR------KPAQRFLDELGVEYDEQ 161 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~-~~GG~~~~--~g~~~~~~~~~------~~~~~~l~~~G~~~~~~ 161 (359)
+|||+|||||++|+.||+.|++. |.+|+|||+.. .+|+.... .++.....+.+ .....+++..+++|...
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 59999999999999999999999 99999999985 34432110 01110000000 01123344445555421
Q ss_pred C-----C---eEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcC
Q 018188 162 D-----N---YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 233 (359)
Q Consensus 162 ~-----~---~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~ 233 (359)
. . .....+...+...+.+.+.+..|++++.. .|+++..++++|.||.+. ++.++.||
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~--------------~G~~i~Ad 164 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVR--------------SGRAIQAK 164 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEET--------------TSCEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEEC--------------CCcEEEeC
Confidence 1 0 11234455667777666654469999654 899998888899888764 23579999
Q ss_pred EEEEcCCCCC
Q 018188 234 IVVSSCGHDG 243 (359)
Q Consensus 234 ~VIlAtGg~s 243 (359)
.||+|||+++
T Consensus 165 ~VVLATG~~s 174 (641)
T 3cp8_A 165 AAILACGTFL 174 (641)
T ss_dssp EEEECCTTCB
T ss_pred EEEECcCCCC
Confidence 9999999873
No 54
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.26 E-value=2.4e-11 Score=113.25 Aligned_cols=114 Identities=18% Similarity=0.239 Sum_probs=68.9
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEe
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIK 168 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 168 (359)
|++|||+||||||+|++||+.|++. |++|+|+|+.. +||..... +. ++... + ..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~-~gg~~~~~---~~---------------~~~~~--~----~~ 57 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT-NRNRVTQN---SH---------------GFITR--D----GI 57 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC-CGGGGSSC---BC---------------CSTTC--T----TB
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC-CCCeeeee---cC---------------CccCC--C----CC
Confidence 3469999999999999999999999 99999999974 44422110 00 00000 0 01
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...++.....+++.+..++.++.. .+..+...+....-+... +..++++|.||+|||...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~--------------~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 58 KPEEFKEIGLNEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTK--------------DHTKYLAERVLLATGMQE 117 (304)
T ss_dssp CHHHHHHHHHHHHTTSTTEEEEEC-CEEEEEECTTSCEEEEET--------------TCCEEEEEEEEECCCCEE
T ss_pred CHHHHHHHHHHHHHhcCCEEEEee-EEEEeeecCCCcEEEEEC--------------CCCEEEeCEEEEccCCcc
Confidence 233444555555554445555554 555554443322223332 246899999999999653
No 55
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.25 E-value=6.1e-11 Score=119.95 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=84.4
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCC---------cce
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGV---------EYD 159 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~ 159 (359)
+.++||+|||||++|+++|+.|+++ |++|+||||...++... . + ..+.....+.++++|+ ++.
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~~~~~~-~-~-----~~l~~~~~~~l~~lGl~~~~~~~~~~~~ 95 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDGTITHP-R-V-----GTIGPRSMELFRRWGVAKQIRTAGWPGD 95 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSCCSSC-C-C-----CEECHHHHHHHHHTTCHHHHHTSSCCTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCC-c-e-----eeeCHHHHHHHHHcCChHHHHhhcCCcc
Confidence 3468999999999999999999999 99999999987664221 1 1 1122333344444432 110
Q ss_pred e---------cCC----------------------eEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEE
Q 018188 160 E---------QDN----------------------YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGV 208 (359)
Q Consensus 160 ~---------~~~----------------------~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv 208 (359)
. ... .....+...+.+.|.+.+. +. ++++++|+++..+++.|. +
T Consensus 96 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~-~~---v~~~~~v~~~~~~~~~v~-v 170 (549)
T 2r0c_A 96 HPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVG-ER---LRTRSRLDSFEQRDDHVR-A 170 (549)
T ss_dssp SBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHG-GG---EECSEEEEEEEECSSCEE-E
T ss_pred cccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHH-Hh---cccCcEEEEEEEeCCEEE-E
Confidence 0 000 0112233455566666664 33 999999999998877665 3
Q ss_pred EEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 209 VTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 209 ~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+.+ .+ +|...+++||+||.|+|++|
T Consensus 171 ~~~~------~~---~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 171 TITD------LR---TGATRAVHARYLVACDGASS 196 (549)
T ss_dssp EEEE------TT---TCCEEEEEEEEEEECCCTTC
T ss_pred EEEE------CC---CCCEEEEEeCEEEECCCCCc
Confidence 3321 00 12236799999999999776
No 56
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.25 E-value=6e-11 Score=118.63 Aligned_cols=141 Identities=16% Similarity=0.114 Sum_probs=88.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhc--c-------hhH--------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVV--R-------KPA-------------- 147 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~--~-------~~~-------------- 147 (359)
++||+|||||++|+++|+.|+++ |++|+||||....+|.+..++++++.... . ...
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~-G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 81 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR-GLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHI 81 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCcc
Confidence 48999999999999999999999 99999999987665555444333221000 0 000
Q ss_pred -----------------------HHHHHHcC-Ccc-ee------c--C--------CeE---EEechHHHHHHHHHHHHh
Q 018188 148 -----------------------QRFLDELG-VEY-DE------Q--D--------NYV---VIKHAALFTSTIMSKLLA 183 (359)
Q Consensus 148 -----------------------~~~l~~~G-~~~-~~------~--~--------~~~---~~~~~~~~~~~L~~~~~~ 183 (359)
..+++.++ ..+ +. . . .+. ...+...+...|.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~- 160 (501)
T 2qcu_A 82 AFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV- 160 (501)
T ss_dssp EEEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHH-
T ss_pred ccccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHH-
Confidence 00111111 000 00 0 0 000 12356677888887776
Q ss_pred CCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 184 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 184 ~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+.|++++++++|+++..++ .+.+|.+.+ .. ++...+++||.||+|+|.++
T Consensus 161 ~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d------~~---~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 161 RKGGEVLTRTRATSARREN-GLWIVEAED------ID---TGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HTTCEEECSEEEEEEEEET-TEEEEEEEE------TT---TCCEEEEEESCEEECCGGGH
T ss_pred HcCCEEEcCcEEEEEEEeC-CEEEEEEEE------CC---CCCEEEEECCEEEECCChhH
Confidence 5799999999999998876 455666531 00 11234799999999999553
No 57
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.25 E-value=5.2e-11 Score=115.71 Aligned_cols=135 Identities=19% Similarity=0.280 Sum_probs=86.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCe-EEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCC---------ccee
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIR-VAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGV---------EYDE 160 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~-V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~~ 160 (359)
++||+|||||++|+++|+.|++. |++ |+|+||...++... ....+.+...+.|+++|+ +...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~~~~~g-------~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~ 75 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSEIRPLG-------VGINIQPAAVEALAELGLGPALAATAIPTHE 75 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSSCCCCS-------CEEEECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCCcccce-------eEEEEChHHHHHHHHCCChHHHHhhCCCcce
Confidence 48999999999999999999999 999 99999987654211 011223334455555554 1100
Q ss_pred ------cCC------------e---EEEechHHHHHHHHHHHHhCCC-cEEEcceeeeeEEEeCCEEEEEEEceeeeecc
Q 018188 161 ------QDN------------Y---VVIKHAALFTSTIMSKLLARPN-VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMN 218 (359)
Q Consensus 161 ------~~~------------~---~~~~~~~~~~~~L~~~~~~~~g-v~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~ 218 (359)
.+. + ....+...+.+.|.+.+.+..| ++++++++|+++.. ++.+. +...+
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~------ 147 (410)
T 3c96_A 76 LRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGAR------ 147 (410)
T ss_dssp EEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEE------
T ss_pred EEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEec------
Confidence 000 0 1233445677777777754335 68999999999987 54443 33221
Q ss_pred CCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 219 HDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 219 ~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
.. +|...+++||+||.|+|..+.
T Consensus 148 ~~---~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 148 DG---HGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp ET---TSCEEEEEESEEEECCCTTCH
T ss_pred CC---CCCceEEecCEEEECCCccch
Confidence 00 012257999999999997763
No 58
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.25 E-value=3.7e-11 Score=114.64 Aligned_cols=135 Identities=15% Similarity=0.195 Sum_probs=85.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc--cCCcceee-hh-------------------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW--LGGQLFSA-MV------------------------- 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~--~~g~~~~~-~~------------------------- 142 (359)
++||+|||||++|+++|+.|+++ |.+|+|||+....++... ..+.++.. ..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCC
Confidence 48999999999999999999999 999999999876543211 11111110 00
Q ss_pred ---c-----------c----hhHHHHHHHcCCcceec---------------CCe--E-----EEechHHHHHHHHHHHH
Q 018188 143 ---V-----------R----KPAQRFLDELGVEYDEQ---------------DNY--V-----VIKHAALFTSTIMSKLL 182 (359)
Q Consensus 143 ---~-----------~----~~~~~~l~~~G~~~~~~---------------~~~--~-----~~~~~~~~~~~L~~~~~ 182 (359)
. . ....+++.++|+++... ..+ . ...+...+...|.+.+.
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 160 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK 160 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHH
Confidence 0 0 01112233444432210 000 0 02234567788777775
Q ss_pred hCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 183 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 183 ~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+.|++++++++|+++..+++.+. +.+. ..+++||.||+|+|.++
T Consensus 161 -~~G~~i~~~~~V~~i~~~~~~~~-v~~~---------------~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 161 -EAGCAQLFNCPVTAIRHDDDGVT-IETA---------------DGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp -HTTCEEECSCCEEEEEECSSSEE-EEES---------------SCEEEEEEEEECCGGGG
T ss_pred -HCCCEEEcCCEEEEEEEcCCEEE-EEEC---------------CCeEEcCEEEEcCCccH
Confidence 57999999999999988766542 4332 23599999999999765
No 59
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.24 E-value=7.1e-11 Score=125.12 Aligned_cols=136 Identities=22% Similarity=0.308 Sum_probs=92.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCC--CCCcccCCcce-ee-------------------h------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSP--GGGAWLGGQLF-SA-------------------M------ 141 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~--GG~~~~~g~~~-~~-------------------~------ 141 (359)
++||||||||++|+++|+.|+++ |. +|+||||+..+ +|+++...+.+ .. +
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~-G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTR-GWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 48999999999999999999999 98 99999998763 44444332211 10 0
Q ss_pred --------h--cch-------hHHHHHHHcCCcceecC------------------Ce----EEEechHHHHHHHHHHHH
Q 018188 142 --------V--VRK-------PAQRFLDELGVEYDEQD------------------NY----VVIKHAALFTSTIMSKLL 182 (359)
Q Consensus 142 --------~--~~~-------~~~~~l~~~G~~~~~~~------------------~~----~~~~~~~~~~~~L~~~~~ 182 (359)
. ... ...+++..+|+++.... .+ ....+...+...|.+.+.
T Consensus 83 ~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~ 162 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE 162 (830)
T ss_dssp SEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH
Confidence 0 000 01123444555332100 00 012356678888887776
Q ss_pred hCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 183 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 183 ~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+.|++++++++|+++..+++++.+|.+. ..+++||.||+|+|.++
T Consensus 163 -~~Gv~i~~~t~V~~i~~~~~~v~~V~t~---------------~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 163 -SAGVTYRGSTTVTGIEQSGGRVTGVQTA---------------DGVIPADIVVSCAGFWG 207 (830)
T ss_dssp -HTTCEEECSCCEEEEEEETTEEEEEEET---------------TEEEECSEEEECCGGGH
T ss_pred -HcCCEEECCceEEEEEEeCCEEEEEEEC---------------CcEEECCEEEECCccch
Confidence 5799999999999999888888777663 24799999999999654
No 60
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.24 E-value=2.5e-11 Score=114.43 Aligned_cols=130 Identities=20% Similarity=0.295 Sum_probs=82.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
++||+|||||++|+++|+.|+++ |++|+|||+.+.+||..... +......... ......+.++... .......
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~~gg~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ 75 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEASPGGAWQHA---WHSLHLFSPA-GWSSIPGWPMPAS--QGPYPAR 75 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSSSSGGGGGS---CTTCBCSSCG-GGSCCSSSCCCCC--SSSSCBH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCcccCC---CCCcEecCch-hhhhCCCCCCCCC--ccCCCCH
Confidence 48999999999999999999999 99999999998887653211 0000000000 0000001111100 0011223
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+...+.+.+ ++.|++++++++|+++..+++.+.+|.+. ..++.+|.||+|||.++
T Consensus 76 ~~~~~~l~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~v~~~---------------~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYE-QKYALPVLRPIRVQRVSHFGERLRVVARD---------------GRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHH-HHTTCCEECSCCEEEEEEETTEEEEEETT---------------SCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHH-HHcCCEEEcCCEEEEEEECCCcEEEEEeC---------------CCEEEeCEEEECCCCCC
Confidence 45555554444 46799999999999999888765434432 23799999999999754
No 61
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.23 E-value=4.6e-11 Score=111.52 Aligned_cols=111 Identities=18% Similarity=0.217 Sum_probs=71.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.+|||+||||||+|++||+.|++. |++|+|+||. .+||.+...++.++... .. ...
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~-~~gG~~~~~~~i~~~p~-------------~~---------~~~ 60 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERG-IPGGQMANTEEVENFPG-------------FE---------MIT 60 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTGGGGGCSCBCCSTT-------------CS---------SBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecC-CCCCeeecccccCCcCC-------------cc---------ccc
Confidence 369999999999999999999999 9999999986 67887766555432110 00 012
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..++......... +.+..+..+..+.........+ +.. +..++++|.||+|||+.
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 61 GPDLSTKMFEHAK-KFGAVYQYGDIKSVEDKGEYKV--INF---------------GNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHHH-HTTCEEEECCCCEEEECSSCEE--EEC---------------SSCEEEEEEEEECCCEE
T ss_pred hHHHHHHHHHHHh-hccccccceeeeeeeeeeccee--ecc---------------CCeEEEeceeEEcccCc
Confidence 2333444344443 4566666665444333222221 111 24789999999999954
No 62
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.23 E-value=7.3e-11 Score=117.38 Aligned_cols=56 Identities=9% Similarity=0.093 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.+.+.|.+.+. +.|++|+++++|++|..+++++++|++. ++.++.||.||.+++..
T Consensus 222 ~l~~aL~~~~~-~~Gg~I~~~~~V~~I~~~~~~~~gV~~~--------------~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 222 ALVQGMIKLFQ-DLGGEVVLNARVSHMETTGNKIEAVHLE--------------DGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEET--------------TSCEEECSCEEECCC--
T ss_pred chHHHHHHHHH-HhCCceeeecceeEEEeeCCeEEEEEec--------------CCcEEEcCEEEECCCHH
Confidence 34455555553 6899999999999999999999999885 34789999999988844
No 63
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.22 E-value=1.9e-10 Score=116.93 Aligned_cols=142 Identities=17% Similarity=0.196 Sum_probs=90.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehh----------------------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMV---------------------------- 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~---------------------------- 142 (359)
++||+|||||++|+++|+.|+++ |++|+|||+....+|.+..+.+++..-.
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r-G~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~~~~~ 110 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS-GIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGIAPHI 110 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcccccccccccccchhhccChHHHHHHHHHHHHHHHhCccc
Confidence 58999999999999999999999 9999999999766665544322211000
Q ss_pred ----------cc-------h--------hHHHHHHH---cCCccee--------------cCCe----EE---EechHHH
Q 018188 143 ----------VR-------K--------PAQRFLDE---LGVEYDE--------------QDNY----VV---IKHAALF 173 (359)
Q Consensus 143 ----------~~-------~--------~~~~~l~~---~G~~~~~--------------~~~~----~~---~~~~~~~ 173 (359)
.. . ...+++.. .+..... .+.+ .+ ..+...+
T Consensus 111 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~~~gg~~~~dg~v~~~~l 190 (571)
T 2rgh_A 111 PKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNNDARL 190 (571)
T ss_dssp SEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEECCEECCHHHH
T ss_pred ccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhhceEEEEecCCeEchHHH
Confidence 00 0 00112211 1111100 0001 00 1234566
Q ss_pred HHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 174 TSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 174 ~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...+.+.+. +.|++++++++|+++..+++++.+|.+.+ .. ++...+++||.||+|+|.++
T Consensus 191 ~~~l~~~a~-~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d------~~---tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 191 VIDNIKKAA-EDGAYLVSKMKAVGFLYEGDQIVGVKARD------LL---TDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHH-HTTCEEESSEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHH-HcCCeEEeccEEEEEEEeCCEEEEEEEEE------cC---CCCEEEEEcCEEEECCChhH
Confidence 677776665 67999999999999999888888887632 00 11234799999999999553
No 64
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.21 E-value=1.9e-10 Score=115.71 Aligned_cols=65 Identities=12% Similarity=0.235 Sum_probs=46.8
Q ss_pred EEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 166 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 166 ~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
+..+...+...|.+.+.+..|++++++ +|+++..++ +.+.+|... ++.+++||.||+|+|..+.
T Consensus 170 ~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~--------------~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 170 YHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITK--------------QNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp EEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEES--------------SSCEEECSEEEECSGGGCC
T ss_pred EEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEEC--------------CCCEEEcCEEEECCCcchH
Confidence 344566777777777764379999999 699998764 445556553 1245999999999998775
Q ss_pred C
Q 018188 245 F 245 (359)
Q Consensus 245 ~ 245 (359)
.
T Consensus 235 ~ 235 (526)
T 2pyx_A 235 L 235 (526)
T ss_dssp C
T ss_pred H
Confidence 4
No 65
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.20 E-value=4.9e-11 Score=119.19 Aligned_cols=135 Identities=18% Similarity=0.140 Sum_probs=89.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCc-----ceecCCe
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVE-----YDEQDNY 164 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~-----~~~~~~~ 164 (359)
..+||+|||||++|+++|+.|++. |++|+|||+.+.+|+... ........+.+..+|+. |... .+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~~g~~~~--------~~~~~~~~~~l~~~g~~~~~~~~~~~-~~ 160 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIKFSRHNV--------LHLWPFTIHDLRALGAKKFYGRFCTG-TL 160 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSSCCCCCE--------EECCHHHHHHHHTTTHHHHCTTTTCT-TC
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccccCCCCc--------ccCChhHHHHHHHcCCcccccccccc-cc
Confidence 458999999999999999999999 999999999987754211 11223344555555542 1111 11
Q ss_pred EEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEe--CCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 165 VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 165 ~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
. ..+...+...|.+.+. +.|++++++++|+++..+ ++....|.+.. .. ++...+++||+||+|+|+.
T Consensus 161 ~-~~~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~------~~---~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 161 D-HISIRQLQLLLLKVAL-LLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP------NP---PAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp C-EEEHHHHHHHHHHHHH-HTTCEEEESCEEEEEECCCSTTCCBEEEEES------CC---CHHHHTCCBSEEEECCCTT
T ss_pred c-cCCHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEecCCCCEEEEEEEE------CC---CCCEEEEEcCEEEECCCCC
Confidence 1 1234566677766665 579999999999999864 23333344420 00 0111468999999999998
Q ss_pred CCC
Q 018188 243 GPF 245 (359)
Q Consensus 243 s~~ 245 (359)
+..
T Consensus 230 S~~ 232 (497)
T 2bry_A 230 FVP 232 (497)
T ss_dssp CCC
T ss_pred ccc
Confidence 754
No 66
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.20 E-value=6e-11 Score=116.46 Aligned_cols=42 Identities=31% Similarity=0.434 Sum_probs=35.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCC-CeEEEEee-ccCCCCCcc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPS-IRVAIIEQ-SVSPGGGAW 132 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~vlEk-~~~~GG~~~ 132 (359)
.++||||||||++|+++|+.|+++ | .+|+|||+ .....|.++
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~~~~~~g~S~ 65 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAGHAPGSGDSG 65 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESSSSTTCSGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccCCCCCCCccc
Confidence 468999999999999999999999 9 99999999 443334333
No 67
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.20 E-value=2.4e-11 Score=118.11 Aligned_cols=135 Identities=19% Similarity=0.271 Sum_probs=80.8
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCc--ceeehhcc-------hhHHHHHHH-cCC---
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQ--LFSAMVVR-------KPAQRFLDE-LGV--- 156 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~--~~~~~~~~-------~~~~~~l~~-~G~--- 156 (359)
++||+|||||++|+++|+.|+++ ||++|+|||+....++.++..++ ++...... ....+.+.+ .+.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999999984 58999999998766555443222 20111100 111122221 221
Q ss_pred -cceecCCe-----------------------------------------EEEechHHHHHHHHHHHHhCCCcEEEccee
Q 018188 157 -EYDEQDNY-----------------------------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVA 194 (359)
Q Consensus 157 -~~~~~~~~-----------------------------------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~ 194 (359)
.+...+.+ ....+...+...|.+.+. +.|++++++++
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~-~~Gv~i~~~~~ 194 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAI-GQGAGLLLNTR 194 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHH-TTTCEEECSCE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHH-HCCCEEEcCCE
Confidence 11110000 012234567788877775 67999999999
Q ss_pred ee---------eEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 195 AE---------DLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 195 V~---------~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
|+ ++..+++++ +|.+. ..+++||.||+|+|.+
T Consensus 195 v~~~~g~~~~~~i~~~~~~v-~v~~~---------------~g~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQ-IVVHE---------------TRQIRAGVIIVAAGAA 235 (405)
T ss_dssp EEEETTEEEEECBCC--------CBC---------------CEEEEEEEEEECCGGG
T ss_pred EEeccccccccceEeeCCeE-EEEEC---------------CcEEECCEEEECCCcc
Confidence 99 887666655 44332 2479999999999944
No 68
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.20 E-value=8.5e-11 Score=111.91 Aligned_cols=117 Identities=20% Similarity=0.225 Sum_probs=79.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.+||+|||||++|+++|+.|++. |++|+|||+.+.+||.+...- ..... ++. ..+. ....
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~~--~~~~~---------------~~~-~~~~-~~~~ 73 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMPQLGGQLAALY--PEKHI---------------YDV-AGFP-EVPA 73 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHTC--TTSEE---------------CCS-TTCS-SEEH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCcccccC--CCccc---------------ccC-CCCC-CCCH
Confidence 58999999999999999999999 999999999988775432100 00000 000 0000 0123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCC-EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+...+.+.+. +.+++++++++|+.+..+++ .+. |.+. +..++.+|+||+|||..+
T Consensus 74 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~-v~~~--------------~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 74 IDLVESLWAQAE-RYNPDVVLNETVTKYTKLDDGTFE-TRTN--------------TGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHH-TTCCEEECSCCEEEEEECTTSCEE-EEET--------------TSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHH-HhCCEEEcCCEEEEEEECCCceEE-EEEC--------------CCcEEEeeEEEEccCCCc
Confidence 455666666554 67899999999999987654 332 3332 235799999999999854
No 69
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.19 E-value=1.3e-10 Score=119.55 Aligned_cols=137 Identities=22% Similarity=0.269 Sum_probs=87.1
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCc------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISK-NPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVE------------ 157 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~------------ 157 (359)
++||+|||||++|+++|+.|++ . |++|+||||...++... ....+.....+.++++|+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~~~~~g-------~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~ 103 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEGPMELG-------QADGIACRTMEMFEAFEFADSILKEACWIND 103 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSSCCSSC-------SCCEECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred CCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCCCCCCC-------ceeeeCHHHHHHHHHcCcHHHHHHhcccccc
Confidence 4899999999999999999999 9 99999999987653211 1112233344555555431
Q ss_pred ---ceec----C-----------------CeEEEechHHHHHHHHHHHHhCCCc--EEEcceeeeeEEEeCC----EEEE
Q 018188 158 ---YDEQ----D-----------------NYVVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG----RVGG 207 (359)
Q Consensus 158 ---~~~~----~-----------------~~~~~~~~~~~~~~L~~~~~~~~gv--~i~~~~~V~~l~~~~~----~v~g 207 (359)
+... . ......+...+.+.|.+.+. +.|+ +++++++|+++..+++ .+.
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~-~~g~~v~v~~~~~v~~l~~~~~~~~~~v~- 181 (639)
T 2dkh_A 104 VTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMR-NSPSRLEPHYARRVLDVKVDHGAADYPVT- 181 (639)
T ss_dssp EEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHH-HSTTCCCCBCSEEEEEEEECTTCSSCCEE-
T ss_pred eEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHH-hCCCCcEEecCCEEEEEEECCCCCcCCEE-
Confidence 0000 0 01123344567777777776 4555 9999999999988752 333
Q ss_pred EEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 208 VVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 208 v~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
|.+.+ .+...++...+++||+||.|+|++|
T Consensus 182 v~~~~------~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 182 VTLER------CDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp EEEEE------CSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred EEEEe------ccccCCCCeEEEEeCEEEECCCcch
Confidence 33321 0000012236799999999999776
No 70
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.18 E-value=1.4e-10 Score=107.92 Aligned_cols=111 Identities=21% Similarity=0.264 Sum_probs=75.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.+||+|||||++|+++|+.|++. |.+|+|||+. +||.....+..+... +.+. ...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~--~gg~~~~~~~~~~~~-------------~~~~---------~~~ 69 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET--PGGQLTEAGIVDDYL-------------GLIE---------IQA 69 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS--TTGGGGGCCEECCST-------------TSTT---------EEH
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc--CCCeecccccccccC-------------CCCC---------CCH
Confidence 58999999999999999999999 9999999998 665443322111100 0000 123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++...+.+.+. +.|+++++ ++|.++..+++.+. +... +..++.+|.||+|||...
T Consensus 70 ~~~~~~~~~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~~--------------~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 70 SDMIKVFNKHIE-KYEVPVLL-DIVEKIENRGDEFV-VKTK--------------RKGEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHHHH-TTTCCEEE-SCEEEEEEC--CEE-EEES--------------SSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHH-HcCCEEEE-EEEEEEEecCCEEE-EEEC--------------CCCEEEcCEEEECcCCCC
Confidence 455566555554 67999998 79999987655433 3332 236799999999999763
No 71
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.18 E-value=8.3e-11 Score=115.76 Aligned_cols=141 Identities=17% Similarity=0.075 Sum_probs=83.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCC--eEEEEeeccCCCCCcccCCcce--------------------------eeh
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSVSPGGGAWLGGQLF--------------------------SAM 141 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~~~GG~~~~~g~~~--------------------------~~~ 141 (359)
..+||+|||||++|+++|+.|++. |. +|+|+|+...+||.....+... ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 358999999999999999999999 99 9999999988876543322100 000
Q ss_pred hc---chhHHHHHHH-cCCcceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeec
Q 018188 142 VV---RKPAQRFLDE-LGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 217 (359)
Q Consensus 142 ~~---~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~ 217 (359)
.. .....+.+.. .+.++... .....+...+.+.|...+ ++.+..++++++|+++..+++.+. |.+.+
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~-~~~~~~i~~~t~V~~v~~~~~~~~-V~~~~----- 154 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQ--TLQFPHRHTIQEYQRIYA-QPLLPFIKLATDVLDIEKKDGSWV-VTYKG----- 154 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTT--CCSSCBHHHHHHHHHHHH-GGGGGGEECSEEEEEEEEETTEEE-EEEEE-----
T ss_pred hhhhhccCCCHHHhccCCCCCCCC--CCCCCCHHHHHHHHHHHH-HHhhCeEEeCCEEEEEEeCCCeEE-EEEee-----
Confidence 00 0000001111 12222211 111223445555554444 355778999999999988776543 33321
Q ss_pred cCCCCCCCC-CeEEEcCEEEEcCCCCCC
Q 018188 218 NHDTQSCMD-PNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 218 ~~~~~~~g~-~~~i~A~~VIlAtGg~s~ 244 (359)
.. ++. ..++.+|.||+|||+++.
T Consensus 155 -~~---~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 155 -TK---AGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp -SS---TTCCEEEEEESEEEECCCSSSS
T ss_pred -cC---CCCeeEEEEeCEEEECCCCCCC
Confidence 00 011 237999999999998763
No 72
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.17 E-value=9.4e-11 Score=109.61 Aligned_cols=116 Identities=21% Similarity=0.245 Sum_probs=77.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.+||+|||||++|+++|+.|++. |.+|+|||+.+.+||.... .+.... ......+. ....
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gG~~~~---~~~~~~---------------~~~~~~~~-~~~~ 66 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLPQLGGQLSA---LYPEKY---------------IYDVAGFP-KIRA 66 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHH---HCTTSE---------------ECCSTTCS-SEEH
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCceehh---cCCCce---------------EeccCCCC-CCCH
Confidence 48999999999999999999999 9999999999888764311 000000 00000000 0123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.++...+.+.+ ++.+++++++++|+++..+++....|... ..++.+|.||+|||..
T Consensus 67 ~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~v~~~---------------~g~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 67 QELINNLKEQM-AKFDQTICLEQAVESVEKQADGVFKLVTN---------------EETHYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHH-TTSCCEEECSCCEEEEEECTTSCEEEEES---------------SEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHH-HHhCCcEEccCEEEEEEECCCCcEEEEEC---------------CCEEEeCEEEECCCCC
Confidence 45556655555 46799999999999998776522224332 2349999999999983
No 73
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.17 E-value=1.4e-10 Score=108.98 Aligned_cols=116 Identities=23% Similarity=0.316 Sum_probs=78.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.+||+|||||++|+++|+.|++. |.+|+|+|+...+||.+... +..... ++ ...+.. ...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~---~~~~~~--------------~~-~~~~~~-~~~ 64 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLPEPGGQLTAL---YPEKYI--------------YD-VAGFPK-VYA 64 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSCHHHHHT---CTTSEE--------------CC-STTCSS-EEH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCeeecc---CCCcee--------------ec-cCCCCC-CCH
Confidence 58999999999999999999999 99999999998876543210 000000 00 000100 123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.++...+.+.+. +.+++++++++|..+..+++.+. +... +..++.+|.||+|||..
T Consensus 65 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~~-v~~~--------------~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVA-PFNPVYSLGERAETLEREGDLFK-VTTS--------------QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHG-GGCCEEEESCCEEEEEEETTEEE-EEET--------------TSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHH-HcCCEEEeCCEEEEEEECCCEEE-EEEC--------------CCCEEEeCEEEECCCCC
Confidence 455566555553 67899999999999987766432 3332 13579999999999975
No 74
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.16 E-value=2.9e-10 Score=114.57 Aligned_cols=64 Identities=16% Similarity=0.232 Sum_probs=47.0
Q ss_pred EEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 166 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 166 ~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
...+...+...|.+.+. +.|++++++ +|+++..++ +.+.+|... ++.+++||.||+|+|..+.
T Consensus 160 ~~i~~~~l~~~L~~~a~-~~gv~~~~~-~v~~i~~~~~g~~~~v~~~--------------~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAV-ERGVNRVVD-EVVDVRLNNRGYISNLLTK--------------EGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp EEECHHHHHHHHHHHHH-HTTCEEEEC-CEEEEEECTTSCEEEEEET--------------TSCEECCSEEEECCGGGCC
T ss_pred EEEeHHHHHHHHHHHHH-HCCCEEEEe-eEeEEEEcCCCcEEEEEEC--------------CCcEEEeCEEEECCCCchh
Confidence 34455677777777776 479999999 899998754 445556553 1247999999999998775
Q ss_pred C
Q 018188 245 F 245 (359)
Q Consensus 245 ~ 245 (359)
.
T Consensus 224 ~ 224 (538)
T 2aqj_A 224 L 224 (538)
T ss_dssp C
T ss_pred h
Confidence 4
No 75
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.15 E-value=4.3e-10 Score=113.70 Aligned_cols=65 Identities=18% Similarity=0.218 Sum_probs=47.7
Q ss_pred EEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 166 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 166 ~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
+..+...+...|.+.+.+..|++++++ +|+++..++ +.+.+|.+. ++.+++||.||+|+|..+.
T Consensus 189 ~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~--------------~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 189 WHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTA--------------TGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEET--------------TSCEEECSEEEECCGGGCC
T ss_pred eEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEEC--------------CCCEEECCEEEECCCCchh
Confidence 334566677777777764339999999 999998754 456666653 1357999999999998775
Q ss_pred C
Q 018188 245 F 245 (359)
Q Consensus 245 ~ 245 (359)
.
T Consensus 254 ~ 254 (550)
T 2e4g_A 254 L 254 (550)
T ss_dssp C
T ss_pred h
Confidence 4
No 76
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.15 E-value=8.8e-11 Score=115.79 Aligned_cols=138 Identities=15% Similarity=0.133 Sum_probs=82.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCC-----CeEEEEeeccCCCCCcccCCcceeehhc----------------chhHH
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPS-----IRVAIIEQSVSPGGGAWLGGQLFSAMVV----------------RKPAQ 148 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G-----~~V~vlEk~~~~GG~~~~~g~~~~~~~~----------------~~~~~ 148 (359)
..+||||||||++|+++|+.|++. | .+|+|||+.+.+| |..+.++..... .....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~g---~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDYR---WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSCC---SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCCC---CcCCCCCCCCcCCcchhhccccccCCCCCCChh
Confidence 358999999999999999999998 8 9999999998776 332222111000 01233
Q ss_pred HHHHHcCCcceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEe--CCEEE--EEEEceeeeeccCCCCCC
Q 018188 149 RFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVG--GVVTNWALVSMNHDTQSC 224 (359)
Q Consensus 149 ~~l~~~G~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~--~~~v~--gv~~~~~~~~~~~~~~~~ 224 (359)
+|+...+..+.....-.......++... ++...++.+++++++++|+++..+ +++.. .|...+ . .
T Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~------g----~ 173 (463)
T 3s5w_A 105 NYLHKHDRLVDFINLGTFYPCRMEFNDY-LRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN------A----D 173 (463)
T ss_dssp HHHHHTTCHHHHHHHCCSCCBHHHHHHH-HHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE------T----T
T ss_pred HhhhhcCceeecccccCCCCCHHHHHHH-HHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec------C----C
Confidence 4444433211100000001123334444 444455778999999999999876 24432 232221 1 0
Q ss_pred CCCeEEEcCEEEEcCCCC
Q 018188 225 MDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 225 g~~~~i~A~~VIlAtGg~ 242 (359)
+...++.+|.||+|||+.
T Consensus 174 g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 174 GEELVRTTRALVVSPGGT 191 (463)
T ss_dssp SCEEEEEESEEEECCCCE
T ss_pred CceEEEEeCEEEECCCCC
Confidence 122489999999999973
No 77
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.14 E-value=3e-10 Score=113.60 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=48.5
Q ss_pred EEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 166 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 166 ~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
...+...+...|.+.+. +.|++++++ +|+++..++ +.+.+|.+. ++.+++||.||+|+|.++.
T Consensus 168 ~~~~~~~l~~~L~~~a~-~~gv~~~~~-~v~~i~~~~~~~~~~v~~~--------------~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 168 YHFDADEVARYLSEYAI-ARGVRHVVD-DVQHVGQDERGWISGVHTK--------------QHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp EEECHHHHHHHHHHHHH-HTTCEEEEC-CEEEEEECTTSCEEEEEES--------------SSCEEECSEEEECCGGGCC
T ss_pred EEEcHHHHHHHHHHHHH-HCCCEEEEC-eEeEEEEcCCCCEEEEEEC--------------CCCEEEcCEEEECCCcchH
Confidence 44566778888887776 579999999 999998754 455666653 1247999999999998775
Q ss_pred C
Q 018188 245 F 245 (359)
Q Consensus 245 ~ 245 (359)
.
T Consensus 232 ~ 232 (511)
T 2weu_A 232 L 232 (511)
T ss_dssp C
T ss_pred H
Confidence 3
No 78
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.14 E-value=2.1e-10 Score=107.72 Aligned_cols=131 Identities=11% Similarity=0.115 Sum_probs=78.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCccc---CCcceee----hh-cchhHHHHHHHc---CCccee
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWL---GGQLFSA----MV-VRKPAQRFLDEL---GVEYDE 160 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~---~g~~~~~----~~-~~~~~~~~l~~~---G~~~~~ 160 (359)
+||+|||||++|+++|+.|++. |++|+||||...+||.... .+..+.. +. ......++++.+ +.....
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 7999999999999999999999 9999999999888765422 1111110 00 112223333322 211100
Q ss_pred cCC----------------eEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCC
Q 018188 161 QDN----------------YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSC 224 (359)
Q Consensus 161 ~~~----------------~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~ 224 (359)
... ..+... ..+..+.+.+.+ |++++++++|+++..+++.+. |...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~~~~~-v~~~------------- 143 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGK--PGMSAITRAMRG--DMPVSFSCRITEVFRGEEHWN-LLDA------------- 143 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEES--SCTHHHHHHHHT--TCCEECSCCEEEEEECSSCEE-EEET-------------
T ss_pred cccceeccCcccccCCCCCccEEcC--ccHHHHHHHHHc--cCcEEecCEEEEEEEeCCEEE-EEeC-------------
Confidence 000 011111 113445555542 899999999999998776554 3332
Q ss_pred CCCeEE-EcCEEEEcCCCC
Q 018188 225 MDPNVM-EAKIVVSSCGHD 242 (359)
Q Consensus 225 g~~~~i-~A~~VIlAtGg~ 242 (359)
++..+ +|+.||+|+|..
T Consensus 144 -~g~~~~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 144 -EGQNHGPFSHVIIATPAP 161 (336)
T ss_dssp -TSCEEEEESEEEECSCHH
T ss_pred -CCcCccccCEEEEcCCHH
Confidence 12334 599999999954
No 79
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.13 E-value=1.7e-10 Score=117.27 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=43.9
Q ss_pred HHHHHhCCCcEEEcceeeeeEEEe----CCEEEEEEEceeeeeccCCCCCCCCCeEEEcC-EEEEcCCCCCC
Q 018188 178 MSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK-IVVSSCGHDGP 244 (359)
Q Consensus 178 ~~~~~~~~gv~i~~~~~V~~l~~~----~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~-~VIlAtGg~s~ 244 (359)
+..+.++.|++|++++.|++|+.+ +++++||+... . ++...+++|+ -||+|+|+.++
T Consensus 233 L~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~------~----~G~~~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 233 LLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT------H----KGNTHNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp TTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES------S----TTCEEEEEEEEEEEECSCTTTH
T ss_pred HHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe------c----CCcEEEEEECCEEEEeCCccCC
Confidence 333445789999999999999998 67899998741 1 2245678886 79999998874
No 80
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.12 E-value=5e-10 Score=109.00 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=36.6
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
||+|||||++||++|+.|+++ |.+|+|+|++..+||.+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCceeE
Confidence 899999999999999999999 999999999999988653
No 81
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.12 E-value=3.3e-11 Score=119.26 Aligned_cols=136 Identities=18% Similarity=0.255 Sum_probs=81.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHH----HHHcCCcceec-CCe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRF----LDELGVEYDEQ-DNY 164 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~----l~~~G~~~~~~-~~~ 164 (359)
++||+|||||++|+.+|+.|++. |.+|+|||+.+.+||.+...++.+...+... ...+. +..+|+++... ..+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 58999999999999999999999 9999999999889998876666554333221 11111 33455542210 000
Q ss_pred EE-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCC
Q 018188 165 VV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCG 240 (359)
Q Consensus 165 ~~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtG 240 (359)
.. ..+...+...+ +....++.|++++.++.+. .+.+.+. |... ++...++++|.||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~-v~~~------------~G~~~~i~~d~lIiAtG 148 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSPSEIS-VDTI------------EGENTVVKGKHIIIATG 148 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EETTEEE-ECCS------------SSCCEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEEE-EEeC------------CCceEEEEcCEEEECCC
Confidence 00 00111111111 2222335689999987543 3444332 2111 11226799999999999
Q ss_pred CCC
Q 018188 241 HDG 243 (359)
Q Consensus 241 g~s 243 (359)
..+
T Consensus 149 s~p 151 (470)
T 1dxl_A 149 SDV 151 (470)
T ss_dssp EEE
T ss_pred CCC
Confidence 654
No 82
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.11 E-value=1.3e-10 Score=108.09 Aligned_cols=118 Identities=17% Similarity=0.256 Sum_probs=73.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.|||+||||||||++||+.|++. |++|+|+|+.. .||.+. +|+++....+... .+++. ....
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~-~gg~~~-~G~~~~~~~i~~~-------~g~~~--------~i~~ 65 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM-AGGVAA-GGQLTTTTIIENF-------PGFPN--------GIDG 65 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS-GGGCCT-TCGGGGSSEECCS-------TTCTT--------CEEH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC-CCCccc-CCCcCChHHhhhc-------cCCcc--------cCCH
Confidence 38999999999999999999999 99999999974 344333 3444432222100 01110 1123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++...+.+.+. +.++++... .+.....+.+... +... +..++.+|.||+|||+..
T Consensus 66 ~~l~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~-~~~~--------------~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 66 NELMMNMRTQSE-KYGTTIITE-TIDHVDFSTQPFK-LFTE--------------EGKEVLTKSVIIATGATA 121 (314)
T ss_dssp HHHHHHHHHHHH-HTTCEEECC-CEEEEECSSSSEE-EEET--------------TCCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHh-hcCcEEEEe-EEEEeecCCCceE-EEEC--------------CCeEEEEeEEEEcccccc
Confidence 455555555553 578887766 3444433333222 2222 247899999999999643
No 83
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.11 E-value=2.1e-10 Score=115.26 Aligned_cols=138 Identities=18% Similarity=0.218 Sum_probs=84.4
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc--------CCCCCcccCCcceeehhcch----hHHHHHHHcCC
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV--------SPGGGAWLGGQLFSAMVVRK----PAQRFLDELGV 156 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~--------~~GG~~~~~g~~~~~~~~~~----~~~~~l~~~G~ 156 (359)
+.+|||+|||||++|+.+|+.|++. |.+|+||||.+ .+||.|...|+.+...+... .....+..+|+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~ 108 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGW 108 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCc
Confidence 3469999999999999999999999 99999999964 57887777776665544332 22344556776
Q ss_pred cceecC--CeEEE-echHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEE
Q 018188 157 EYDEQD--NYVVI-KHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM 230 (359)
Q Consensus 157 ~~~~~~--~~~~~-~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i 230 (359)
.+.... +|... .+...+...+ +....+..+++++.+. +..+ +...+. |... +++..++
T Consensus 109 ~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~--d~~~v~-v~~~------------~g~~~~i 172 (519)
T 3qfa_A 109 KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFI--GPHRIK-ATNN------------KGKEKIY 172 (519)
T ss_dssp CCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE--ETTEEE-EECT------------TCCCCEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe--eCCEEE-EEcC------------CCCEEEE
Confidence 554221 11100 1111122221 1223345789998874 3322 444332 2221 1233589
Q ss_pred EcCEEEEcCCCCC
Q 018188 231 EAKIVVSSCGHDG 243 (359)
Q Consensus 231 ~A~~VIlAtGg~s 243 (359)
.+|.||+|||+..
T Consensus 173 ~~d~lViATGs~p 185 (519)
T 3qfa_A 173 SAERFLIATGERP 185 (519)
T ss_dssp EEEEEEECCCEEE
T ss_pred ECCEEEEECCCCc
Confidence 9999999999643
No 84
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.11 E-value=7e-10 Score=106.68 Aligned_cols=126 Identities=14% Similarity=0.087 Sum_probs=76.5
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcc--------------
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEY-------------- 158 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~-------------- 158 (359)
+|+||||||+||++|+.|+++ |++|+|+||.+.+..... +.. ..+.+...+.|+++|+.-
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~~~~~~~-G~~----i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~ 76 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSAASSILP-GYG----IHINSFGKQALQECLPAENWLAFEEASRYIGG 76 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSSCSSCC-CCE----EEECHHHHHHHHHHSCHHHHHHHHHHCEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCCCCcCCC-ceE----EeeCHHHHHHHHHcCChHHHHHhhhhhcccCc
Confidence 699999999999999999999 999999999875532100 111 112233334444444310
Q ss_pred ----eecC-Ce------------------EEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCC-EEEEEEEceee
Q 018188 159 ----DEQD-NY------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-RVGGVVTNWAL 214 (359)
Q Consensus 159 ----~~~~-~~------------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~-~v~gv~~~~~~ 214 (359)
.... .. ....+...+.+ .+.+..+.+++++++++++...++ .+. +...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~----~L~~~~~~~v~~~~~v~~~~~~~~~~v~-v~~~--- 148 (412)
T 4hb9_A 77 QSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKE----ILNKGLANTIQWNKTFVRYEHIENGGIK-IFFA--- 148 (412)
T ss_dssp CCEEECTTSCEEEC--------------CEEEEEHHHHHH----HHHTTCTTTEECSCCEEEEEECTTSCEE-EEET---
T ss_pred ceeEecCCcceecccCCccccccccccccceEeeHHHHHH----HHHhhccceEEEEEEEEeeeEcCCCeEE-EEEC---
Confidence 0000 00 00112222322 233344567899999999987544 443 4443
Q ss_pred eeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 215 VSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 215 ~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+++||+||.|+|.+|
T Consensus 149 -----------dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 149 -----------DGSHENVDVLVGADGSNS 166 (412)
T ss_dssp -----------TSCEEEESEEEECCCTTC
T ss_pred -----------CCCEEEeeEEEECCCCCc
Confidence 246799999999999776
No 85
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.10 E-value=3e-10 Score=106.41 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=74.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.+||+|||||++|+++|+.|++. |.+|+|||+. .+||.+......... .+.+. ....
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~~-------------~~~~~--------~~~~ 64 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKG-MPGGQIAWSEEVENF-------------PGFPE--------PIAG 64 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTGGGGGCSCBCCS-------------TTCSS--------CBCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCC-CCCcccccccccccC-------------CCCCC--------CCCH
Confidence 58999999999999999999999 9999999998 566644322111000 01100 1123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEe--CCE-EEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~--~~~-v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+...+.+.+. +.|++++. .+|.++..+ ++. +. +... +..++.+|+||+|||...
T Consensus 65 ~~~~~~l~~~~~-~~gv~~~~-~~v~~i~~~~~~~~~~~-v~~~--------------~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 65 MELAQRMHQQAE-KFGAKVEM-DEVQGVQHDATSHPYPF-TVRG--------------YNGEYRAKAVILATGADP 123 (325)
T ss_dssp HHHHHHHHHHHH-HTTCEEEE-CCEEEEEECTTSSSCCE-EEEE--------------SSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEe-eeEEEEEeccCCCceEE-EEEC--------------CCCEEEeCEEEECcCCCc
Confidence 445555555554 57999987 588888765 332 22 2221 135799999999999643
No 86
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.09 E-value=1.1e-10 Score=117.65 Aligned_cols=139 Identities=16% Similarity=0.231 Sum_probs=85.8
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc--------CCCCCcccCCcceeehhcchhH-HHHHH----HcCC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV--------SPGGGAWLGGQLFSAMVVRKPA-QRFLD----ELGV 156 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~--------~~GG~~~~~g~~~~~~~~~~~~-~~~l~----~~G~ 156 (359)
.+|||||||+|++|+.+|..+++. |++|+|||+.. ..||.|.+.|+++.+.++.... .+.++ .+|+
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 469999999999999999999999 99999999743 4799999999998876655422 22222 2454
Q ss_pred cceec-CCeEE-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEE
Q 018188 157 EYDEQ-DNYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVME 231 (359)
Q Consensus 157 ~~~~~-~~~~~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~ 231 (359)
.++.. -+|.. ..+.....+.+ +...+++.|++++.+. .-..+.+.+. |.... ..+...+++
T Consensus 120 ~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~---a~f~~~~~v~-V~~~~----------~~~~~~~i~ 185 (542)
T 4b1b_A 120 KFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL---AKLKDKNTVS-YYLKG----------DLSKEETVT 185 (542)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE---EEEEETTEEE-EEEC------------CCCEEEEE
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee---EEEcCCCcce-Eeecc----------cCCceEEEe
Confidence 43321 01110 01111222222 2223346799998774 2223455543 22210 011346899
Q ss_pred cCEEEEcCCCCC
Q 018188 232 AKIVVSSCGHDG 243 (359)
Q Consensus 232 A~~VIlAtGg~s 243 (359)
++.+|+|||+..
T Consensus 186 a~~iiIATGs~P 197 (542)
T 4b1b_A 186 GKYILIATGCRP 197 (542)
T ss_dssp EEEEEECCCEEE
T ss_pred eeeEEeccCCCC
Confidence 999999999654
No 87
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.09 E-value=3.3e-10 Score=107.20 Aligned_cols=132 Identities=17% Similarity=0.237 Sum_probs=78.1
Q ss_pred ccEEEECCChHHHHHHHHhhc---CCCCeEEEEeeccCCCCCcccC------Ccceee----hhcch----hHHHH---H
Q 018188 92 TDVIVVGAGSAGLSCAYEISK---NPSIRVAIIEQSVSPGGGAWLG------GQLFSA----MVVRK----PAQRF---L 151 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~vlEk~~~~GG~~~~~------g~~~~~----~~~~~----~~~~~---l 151 (359)
+||+|||||++|+++|+.|++ . |++|+|+||...+||..... +..++. +.... ...++ +
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 599999999999999999999 8 99999999998887643210 011110 00001 12222 2
Q ss_pred HHcCCcceec----------CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCC
Q 018188 152 DELGVEYDEQ----------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT 221 (359)
Q Consensus 152 ~~~G~~~~~~----------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~ 221 (359)
...|+..... ....+.... -+..+.+.+.++.|++|+++++|++|..+++++. |...
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~-v~~~---------- 147 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQ--GISSIIKHYLKESGAEVYFRHRVTQINLRDDKWE-VSKQ---------- 147 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTT--CTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEE-EEES----------
T ss_pred HhCCCeecCchhhcceeccCCccceecCC--CHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEE-EEEC----------
Confidence 2234321110 000111111 0223333333334899999999999998777654 4432
Q ss_pred CCCCCCeEEEcCEEEEcCCC
Q 018188 222 QSCMDPNVMEAKIVVSSCGH 241 (359)
Q Consensus 222 ~~~g~~~~i~A~~VIlAtGg 241 (359)
++.++.+|.||+|+..
T Consensus 148 ----~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 148 ----TGSPEQFDLIVLTMPV 163 (342)
T ss_dssp ----SSCCEEESEEEECSCH
T ss_pred ----CCCEEEcCEEEECCCH
Confidence 1245799999999983
No 88
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.09 E-value=7.1e-10 Score=103.05 Aligned_cols=112 Identities=21% Similarity=0.276 Sum_probs=76.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
+||+|||||++|+++|+.|++. |. +|+|+|+. .+||.+......... .+ +......
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~-~~gg~~~~~~~~~~~-------------~~--------~~~~~~~ 58 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG-MPGGQITGSSEIENY-------------PG--------VKEVVSG 58 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS-STTCGGGGCSCBCCS-------------TT--------CCSCBCH
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC-CCCcccccccccccC-------------CC--------CcccCCH
Confidence 7999999999999999999999 99 99999995 566544322111000 00 0001233
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+...+.+.+ ++.|+++++ ++|.++..+++.+. +... +..++++|.||+|||..+
T Consensus 59 ~~~~~~l~~~~-~~~~v~~~~-~~v~~i~~~~~~~~-v~~~--------------~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 59 LDFMQPWQEQC-FRFGLKHEM-TAVQRVSKKDSHFV-ILAE--------------DGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHHHHHH-HTTSCEEEC-SCEEEEEEETTEEE-EEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHH-HHcCCEEEE-EEEEEEEEcCCEEE-EEEc--------------CCCEEECCEEEECCCCCC
Confidence 45556655555 467999988 68999987776443 3222 235799999999999654
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.08 E-value=5.3e-10 Score=112.80 Aligned_cols=131 Identities=18% Similarity=0.257 Sum_probs=81.9
Q ss_pred CcccEEEECCChHHHHHHHHhh-cCCCCeEEEEeeccCCCCCcccC---Cccee--ehhcc-hhHHHHHHHcCCcceecC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEIS-KNPSIRVAIIEQSVSPGGGAWLG---GQLFS--AMVVR-KPAQRFLDELGVEYDEQD 162 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La-~~~G~~V~vlEk~~~~GG~~~~~---g~~~~--~~~~~-~~~~~~l~~~G~~~~~~~ 162 (359)
.++||+|||||++|+.+|+.|+ +. |.+|+|||+...+||..... |...+ ..... ....+.....+. ..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~----~~ 81 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTW----KT 81 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCC----SB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCC----cc
Confidence 3589999999999999999999 77 99999999998888754322 21111 00000 000111112211 11
Q ss_pred CeEEEechHHHHHHHHHHHHhCCCc--EEEcceeeeeEEEeCC-EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcC
Q 018188 163 NYVVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSC 239 (359)
Q Consensus 163 ~~~~~~~~~~~~~~L~~~~~~~~gv--~i~~~~~V~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAt 239 (359)
.+ ....++...+...+ ++.|+ +++++++|+++..+++ ....|.+. ++.++.||.||+||
T Consensus 82 ~~---~~~~ei~~~l~~~~-~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~--------------~G~~i~ad~lV~At 143 (540)
T 3gwf_A 82 TY---ITQPEILEYLEDVV-DRFDLRRHFKFGTEVTSALYLDDENLWEVTTD--------------HGEVYRAKYVVNAV 143 (540)
T ss_dssp SE---EEHHHHHHHHHHHH-HHTTCGGGEEESCCEEEEEEETTTTEEEEEET--------------TSCEEEEEEEEECC
T ss_pred cC---CCHHHHHHHHHHHH-HHcCCcceeEeccEEEEEEEeCCCCEEEEEEc--------------CCCEEEeCEEEECC
Confidence 11 23344445544444 45677 8999999999988764 22234442 23579999999999
Q ss_pred CCCC
Q 018188 240 GHDG 243 (359)
Q Consensus 240 Gg~s 243 (359)
|..+
T Consensus 144 G~~s 147 (540)
T 3gwf_A 144 GLLS 147 (540)
T ss_dssp CSCC
T ss_pred cccc
Confidence 9765
No 90
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.08 E-value=4.1e-10 Score=109.73 Aligned_cols=40 Identities=35% Similarity=0.593 Sum_probs=38.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
+||||||||++|+++|+.|++. |.+|+|||++..+||.++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCccCeec
Confidence 7999999999999999999999 999999999989998775
No 91
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.08 E-value=9.3e-10 Score=102.78 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=75.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
++||+|||||++|+++|+.|++. |++|+|||+. .+||.+........ + ..+ .....
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~-~~~~~ 71 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKA-VAGGLTAEAPLVEN------------------Y---LGF-KSIVG 71 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-STTGGGGGCSCBCC------------------B---TTB-SSBCH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCC-CCCccccccchhhh------------------c---CCC-cccCH
Confidence 58999999999999999999999 9999999994 56654432211110 0 000 00123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+...+.+.+ ++.|+++++ .+|.++..+++.+. |... ..++.+|.||+|||...
T Consensus 72 ~~~~~~~~~~~-~~~~v~~~~-~~v~~i~~~~~~~~-v~~~---------------~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 72 SELAKLFADHA-ANYAKIREG-VEVRSIKKTQGGFD-IETN---------------DDTYHAKYVIITTGTTH 126 (319)
T ss_dssp HHHHHHHHHHH-HTTSEEEET-CCEEEEEEETTEEE-EEES---------------SSEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHH-HHcCCEEEE-eeEEEEEEeCCEEE-EEEC---------------CCEEEeCEEEECCCCCc
Confidence 34455555555 467999988 68998887766443 3221 25799999999999643
No 92
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.08 E-value=2.4e-10 Score=107.12 Aligned_cols=118 Identities=11% Similarity=0.183 Sum_probs=77.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc----CCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeE
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV----SPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYV 165 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~----~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 165 (359)
..+||+|||||++|+++|+.|++. |++|+|||+.. .+||.......... + .+++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~~~~~~~~~gg~~~~~~~~~~-~------------~~~~-------- 78 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA-EIKPILYEGMMANGIAAGGQLTTTTEIEN-F------------PGFP-------- 78 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSBTTBCTTCGGGGSSEECC-S------------TTCT--------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCCCCCCCcCcccccchhhcc-c------------CCCc--------
Confidence 358999999999999999999999 99999999954 55553322111000 0 0000
Q ss_pred EEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 166 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 166 ~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
......++...+.+.+. +.|+++++++ |.++..+++.+. +... . ..+..++.+|.||+|+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~-~~gv~i~~~~-v~~i~~~~~~~~-v~~~-------~----~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 79 DGLTGSELMDRMREQST-KFGTEIITET-VSKVDLSSKPFK-LWTE-------F----NEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp TCEEHHHHHHHHHHHHH-HTTCEEECSC-EEEEECSSSSEE-EEET-------T----CSSSCCEEEEEEEECCCEEE
T ss_pred ccCCHHHHHHHHHHHHH-HcCCEEEEeE-EEEEEEcCCEEE-EEEE-------e----cCCCcEEEeCEEEECcCCCc
Confidence 01123455566555554 6799999997 888877666544 2221 0 01246789999999999753
No 93
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.08 E-value=5.6e-10 Score=115.40 Aligned_cols=104 Identities=23% Similarity=0.347 Sum_probs=68.6
Q ss_pred cccEEEECCChHHHHHHHHhhc-----CCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCc--------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISK-----NPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVE-------- 157 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~-----~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~-------- 157 (359)
++||+|||||++||++|+.|++ . |++|+||||.+.+... + ....+.....+.|+++|+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~~~~~----g---ra~~l~~~tle~l~~lGl~~~l~~~~~ 79 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRSTKVYN----G---QADGLQCRTLESLKNLGLADKILSEAN 79 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSSCCCS----C---SCCEECHHHHHHHHTTTCHHHHHTTCB
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCCCCCC----C---ceeEEChHHHHHHHHCCCHHHHHHhcc
Confidence 5899999999999999999999 8 9999999998654210 0 1112334455566655541
Q ss_pred ------c-eec--CC-----------------eEEEechHHHHHHHHHHHHhCC--CcEEEcceeeeeEEEeC
Q 018188 158 ------Y-DEQ--DN-----------------YVVIKHAALFTSTIMSKLLARP--NVKLFNAVAAEDLIVKG 202 (359)
Q Consensus 158 ------~-~~~--~~-----------------~~~~~~~~~~~~~L~~~~~~~~--gv~i~~~~~V~~l~~~~ 202 (359)
+ +.. .. .....+...+.+.|++.+.+.. ++++.++++++++..++
T Consensus 80 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 80 DMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp CCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred ccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 0 000 00 0122344566677777765322 38999999999998864
No 94
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.07 E-value=4.2e-10 Score=111.31 Aligned_cols=50 Identities=26% Similarity=0.422 Sum_probs=42.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehh
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMV 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~ 142 (359)
++||+|||||++|+++|+.|++. |.+|+|||+. .+||.+...|+.+...+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~GG~~~~~g~ip~k~l 53 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERG-TIGGTCVNVGCVPSKIM 53 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS-STTHHHHHHSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC-CCCccccCCCccchHHH
Confidence 58999999999999999999999 9999999998 67887776666554433
No 95
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.07 E-value=1.1e-09 Score=100.76 Aligned_cols=110 Identities=17% Similarity=0.188 Sum_probs=73.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
+||+|||||++|+++|+.|++. |.+|+|+|+....+. .+... .+ +.... .....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~~~-~~~~~------------------~~--~~~~~----~~~~~ 56 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGERRNR-FASHS------------------HG--FLGQD----GKAPG 56 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCCGGG-GCSCC------------------CS--STTCT----TCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCcccc-cchhh------------------cC--CcCCC----CCCHH
Confidence 8999999999999999999999 999999999753221 00000 00 00000 01234
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+.+..+++++.. +|+++..+++.+. +.+. +..++.+|.||+|||...
T Consensus 57 ~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~-v~~~--------------~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWVEG-RVTDAKGSFGEFI-VEID--------------GGRRETAGRLILAMGVTD 112 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEEES-CEEEEEEETTEEE-EEET--------------TSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCeEE-EEEC--------------CCCEEEcCEEEECCCCCC
Confidence 556666666654447888765 8999988776533 3332 235799999999999754
No 96
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.06 E-value=4.6e-10 Score=111.62 Aligned_cols=44 Identities=36% Similarity=0.499 Sum_probs=38.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGG 135 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g 135 (359)
.+|||+|||||++|+++|+.|++. |.+|+|||| ..+||.+...|
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk-~~~GG~~~~~g 68 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEE-YRIGGTCVIRG 68 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEES-SCTTHHHHHHS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeC-CCCCCceeccC
Confidence 469999999999999999999999 999999999 57788765444
No 97
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.06 E-value=1.1e-10 Score=115.63 Aligned_cols=132 Identities=17% Similarity=0.246 Sum_probs=79.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHHHHHcCCcceecCCeEEE-e
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRFLDELGVEYDEQDNYVVI-K 168 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~l~~~G~~~~~~~~~~~~-~ 168 (359)
+|||+|||||++|+.+|+.|++. |.+|+||||...+||.+...|+.+...+... ...+.+..+.. +....++... .
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN-VKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC-SCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc-CCCCcCHHHHHH
Confidence 48999999999999999999999 9999999999899998877776655443332 11222222110 0000001000 0
Q ss_pred chHHHHH----HHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeE--EEcCEEEEcCCCC
Q 018188 169 HAALFTS----TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV--MEAKIVVSSCGHD 242 (359)
Q Consensus 169 ~~~~~~~----~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~--i~A~~VIlAtGg~ 242 (359)
....+.+ ..+....++.|++++.+ ++..+ +.+.+. |... +..+ +.+|+||+|||..
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~-V~~~--------------~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHVI-VKTD--------------EGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEEE-EEET--------------TSCEEEEEEEEEEECCCEE
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeEE-EEcC--------------CCcEEEEecCEEEECCCCC
Confidence 1111111 22334445789999888 55554 344332 3221 1244 9999999999953
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.05 E-value=8.5e-10 Score=94.58 Aligned_cols=109 Identities=21% Similarity=0.248 Sum_probs=72.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
+||+|||||++|+.+|..|++. |.+|+|+|+.+..-... .....+ .+++. .....
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~~~~~~~----~~~~~~------------~~~~~--------~~~~~ 56 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGRSKVKGV----SRVPNY------------PGLLD--------EPSGE 56 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSCCTTTTC----SCCCCS------------TTCTT--------CCCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCcccCc----hhhhcc------------CCCcC--------CCCHH
Confidence 7999999999999999999999 99999999986321100 000000 00000 01234
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+.+.+. +.|++++++ +|+++..+++.+ .+... +. ++.+|.||+|+|..+
T Consensus 57 ~~~~~l~~~~~-~~gv~v~~~-~v~~i~~~~~~~-~v~~~--------------~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 57 ELLRRLEAHAR-RYGAEVRPG-VVKGVRDMGGVF-EVETE--------------EG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHH-HTTCEEEEC-CCCEEEECSSSE-EEECS--------------SC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHH-HcCCEEEeC-EEEEEEEcCCEE-EEEEC--------------CC-EEEECEEEECCCCCC
Confidence 45566555554 679999999 999998765543 23321 12 799999999999664
No 99
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.05 E-value=3.9e-10 Score=107.31 Aligned_cols=127 Identities=14% Similarity=0.230 Sum_probs=76.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCCCCCcccCCc---ceeehhcchhHHHHHHHcCCc-cee--cCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSPGGGAWLGGQ---LFSAMVVRKPAQRFLDELGVE-YDE--QDN 163 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~GG~~~~~g~---~~~~~~~~~~~~~~l~~~G~~-~~~--~~~ 163 (359)
++||+|||||++|+++|+.|++. |. +|+|||+.. +||....... .+...... ..+|+. +.. ...
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~ 74 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT-VGHSFKHWPKSTRTITPSFTS-------NGFGMPDMNAISMDT 74 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCC-------GGGTCCCTTCSSTTC
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC-CCCccccCcccccccCcchhc-------ccCCchhhhhccccc
Confidence 48999999999999999999999 99 999999987 6654321110 00000000 001110 000 000
Q ss_pred e------EEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEE
Q 018188 164 Y------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVS 237 (359)
Q Consensus 164 ~------~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIl 237 (359)
+ ........+...+...+ ++.|++++++++|+++..+++.+. |... ..++.+|.||+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~gv~i~~~~~v~~i~~~~~~~~-v~~~---------------~g~~~~d~vVl 137 (369)
T 3d1c_A 75 SPAFTFNEEHISGETYAEYLQVVA-NHYELNIFENTVVTNISADDAYYT-IATT---------------TETYHADYIFV 137 (369)
T ss_dssp CHHHHHCCSSCBHHHHHHHHHHHH-HHTTCEEECSCCEEEEEECSSSEE-EEES---------------SCCEEEEEEEE
T ss_pred cccccccccCCCHHHHHHHHHHHH-HHcCCeEEeCCEEEEEEECCCeEE-EEeC---------------CCEEEeCEEEE
Confidence 0 00112234444444333 467999999999999987654332 3332 13589999999
Q ss_pred cCCCCC
Q 018188 238 SCGHDG 243 (359)
Q Consensus 238 AtGg~s 243 (359)
|+|+.+
T Consensus 138 AtG~~~ 143 (369)
T 3d1c_A 138 ATGDYN 143 (369)
T ss_dssp CCCSTT
T ss_pred CCCCCC
Confidence 999875
No 100
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.05 E-value=2.7e-10 Score=115.06 Aligned_cols=134 Identities=17% Similarity=0.262 Sum_probs=79.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehh-cchhHHHHHHHcCC--cceecCCeEE
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMV-VRKPAQRFLDELGV--EYDEQDNYVV 166 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~-~~~~~~~~l~~~G~--~~~~~~~~~~ 166 (359)
.++||||||||++|+.+|+.|++. |++|+|||++..+||....+ ....... .......+.-.-.. .+.....+
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~~GGtw~~~-~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~-- 83 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGEDVGGTWYWN-RYPGCRLDTESYAYGYFALKGIIPEWEWSENF-- 83 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHC-CCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS--
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccccC-CCCceeecCchhhcccccCcccccCCCccccC--
Confidence 458999999999999999999998 99999999999888754221 1111000 00011111100000 01111111
Q ss_pred EechHHHHHHHHHHHHhCCCc--EEEcceeeeeEEEeCC-EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 167 IKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 167 ~~~~~~~~~~L~~~~~~~~gv--~i~~~~~V~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
....++...+ +...++.++ .++++++|+++..+++ ....|.+. ++.+++||+||+|+|..+
T Consensus 84 -~~~~ei~~yl-~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~--------------~G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 84 -ASQPEMLRYV-NRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLD--------------NEEVVTCRFLISATGPLS 147 (545)
T ss_dssp -CBHHHHHHHH-HHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEET--------------TTEEEEEEEEEECCCSCB
T ss_pred -CCHHHHHHHH-HHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC--------------CCCEEEeCEEEECcCCCC
Confidence 1233444443 333334565 7889999999987653 22224442 236899999999999654
No 101
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.04 E-value=3.8e-10 Score=105.90 Aligned_cols=114 Identities=16% Similarity=0.220 Sum_probs=74.8
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEee----ccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeE
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQ----SVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYV 165 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk----~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 165 (359)
..+||+|||||++|+++|+.|++. |.+|+|||+ ...+||.......... . ..+.
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~~~~~~~~~~----------------~-----~~~~ 64 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEGWMANDIAPGGQLTTTTDVEN----------------F-----PGFP 64 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSBTTBCTTCGGGGCSEECC----------------S-----TTCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeccCccccCCCceeeecccccc----------------C-----CCCc
Confidence 358999999999999999999999 999999999 4445543221110000 0 0010
Q ss_pred EEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 166 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 166 ~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.......+...+.+.+. +.|++++.++ |.++..+++.+. |.+ +..++++|.||+|||..+
T Consensus 65 ~~~~~~~~~~~l~~~~~-~~gv~~~~~~-v~~i~~~~~~~~-v~~---------------~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 65 EGILGVELTDKFRKQSE-RFGTTIFTET-VTKVDFSSKPFK-LFT---------------DSKAILADAVILAIGAVA 124 (333)
T ss_dssp TCEEHHHHHHHHHHHHH-HTTCEEECCC-CCEEECSSSSEE-EEC---------------SSEEEEEEEEEECCCEEE
T ss_pred cCCCHHHHHHHHHHHHH-HCCCEEEEeE-EEEEEEcCCEEE-EEE---------------CCcEEEcCEEEECCCCCc
Confidence 00123455566555554 6799999986 888876555332 222 136799999999999754
No 102
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.04 E-value=3.9e-10 Score=112.28 Aligned_cols=137 Identities=22% Similarity=0.257 Sum_probs=83.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEee--------ccCCCCCcccCCcceeehhcch----hHHHHHHHcCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQ--------SVSPGGGAWLGGQLFSAMVVRK----PAQRFLDELGVE 157 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk--------~~~~GG~~~~~g~~~~~~~~~~----~~~~~l~~~G~~ 157 (359)
.+|||+|||||++|+.+|+.|++. |.+|+|||| ...+||.|...|+.+...+... .....+..+|+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcc
Confidence 359999999999999999999999 999999998 4567888877777766544332 122445567776
Q ss_pred ceecC--CeEE-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEE
Q 018188 158 YDEQD--NYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVME 231 (359)
Q Consensus 158 ~~~~~--~~~~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~ 231 (359)
+.... +|.. ..+...+...+ +....+..+++++.+. +..+ +...+. |... ++...++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~--~~~~v~-v~~~------------~g~~~~~~ 147 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV--DEHTVR-GVDK------------GGKATLLS 147 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES--SSSEEE-EECT------------TSCEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc--cCCeEE-EEeC------------CCceEEEE
Confidence 54211 1110 01111122221 2222345789987763 3222 233322 2221 11236799
Q ss_pred cCEEEEcCCCCC
Q 018188 232 AKIVVSSCGHDG 243 (359)
Q Consensus 232 A~~VIlAtGg~s 243 (359)
+|+||+|||+..
T Consensus 148 ~d~lViATGs~p 159 (488)
T 3dgz_A 148 AEHIVIATGGRP 159 (488)
T ss_dssp EEEEEECCCEEE
T ss_pred CCEEEEcCCCCC
Confidence 999999999643
No 103
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.03 E-value=1.8e-10 Score=114.44 Aligned_cols=145 Identities=18% Similarity=0.255 Sum_probs=82.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-h---HHHHHHHcCCcceecC-CeE
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-P---AQRFLDELGVEYDEQD-NYV 165 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~---~~~~l~~~G~~~~~~~-~~~ 165 (359)
++||+|||||++|+++|+.|++. |.+|+|||+.+.+||.+...++.....++.. . ..+++..+|+++.... .+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 58999999999999999999999 9999999998888887766665544332221 1 1123334565542210 010
Q ss_pred E-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeee-ccCCCCCCCCCeEEEcCEEEEcCC
Q 018188 166 V-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS-MNHDTQSCMDPNVMEAKIVVSSCG 240 (359)
Q Consensus 166 ~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~-~~~~~~~~g~~~~i~A~~VIlAtG 240 (359)
. ......+...+ +....++.|++++.++.+. .+++.+. +...++... ... .++...++++|+||+|||
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~-v~~~~g~~~~~~~---~~g~~~~i~ad~lViAtG 157 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLE-VSLTAGDAYEQAA---PTGEKKIVAFKNCIIAAG 157 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEE-EEEEEEEETTEEE---EEEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEE-EEecCCccccccc---ccCcceEEEcCEEEECCC
Confidence 0 00111111111 2223346799999987543 3445443 221110000 000 000125689999999999
Q ss_pred CCC
Q 018188 241 HDG 243 (359)
Q Consensus 241 g~s 243 (359)
+.+
T Consensus 158 s~p 160 (482)
T 1ojt_A 158 SRV 160 (482)
T ss_dssp EEE
T ss_pred CCC
Confidence 764
No 104
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.03 E-value=7.3e-10 Score=110.33 Aligned_cols=135 Identities=27% Similarity=0.388 Sum_probs=80.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchh-HHHH----HHHcCCcceec-CCe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AQRF----LDELGVEYDEQ-DNY 164 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~-~~~~----l~~~G~~~~~~-~~~ 164 (359)
++||+|||||++|+.+|+.|++. |.+|+||||...+||.++..|+.+...+.... ..+. +..+|+..... ..|
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 59999999999999999999999 99999999998999988877776654443321 1122 22334332111 000
Q ss_pred EE-EechHHHHHH---HHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCC
Q 018188 165 VV-IKHAALFTST---IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCG 240 (359)
Q Consensus 165 ~~-~~~~~~~~~~---L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtG 240 (359)
.. ..+...+... .+....++.+++++.+.... .+.+.+. |... ++...++.+|.||+|||
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~~-v~~~------------~g~~~~~~~d~lViATG 167 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQGKVS-VTNE------------KGEEQVLEAKNVVIATG 167 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---CSSSEEE-EECT------------TSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEE-EEeC------------CCceEEEEeCEEEEccC
Confidence 00 0011111111 12233346789998875322 2334332 2221 11236799999999999
Q ss_pred CC
Q 018188 241 HD 242 (359)
Q Consensus 241 g~ 242 (359)
..
T Consensus 168 s~ 169 (491)
T 3urh_A 168 SD 169 (491)
T ss_dssp EE
T ss_pred CC
Confidence 65
No 105
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.02 E-value=5.9e-10 Score=110.78 Aligned_cols=136 Identities=22% Similarity=0.270 Sum_probs=80.8
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc---------CCCCCcccCCcceeehhcch----hHHHHHHHcCC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV---------SPGGGAWLGGQLFSAMVVRK----PAQRFLDELGV 156 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~---------~~GG~~~~~g~~~~~~~~~~----~~~~~l~~~G~ 156 (359)
.+|||+|||||++|+.+|+.|++. |.+|+||||.. ..||.|...|+.+...+... .....+..+|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 469999999999999999999999 99999999521 26777776676665544332 22344556776
Q ss_pred cceecC--CeEEE-echHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEE
Q 018188 157 EYDEQD--NYVVI-KHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM 230 (359)
Q Consensus 157 ~~~~~~--~~~~~-~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i 230 (359)
.+.... ++... .....+.+.+ .....+..+++++.+.. . ..+.+.+. |... ++ ..++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a-~--~~~~~~v~-v~~~------------~g-~~~~ 149 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLG-S--FVDSHTLL-AKLK------------SG-ERTI 149 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-E--EEETTEEE-EECT------------TC-CEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-E--EccCCEEE-EEeC------------CC-eEEE
Confidence 554321 11100 0111112211 12223457899887742 2 22344332 2221 11 2579
Q ss_pred EcCEEEEcCCCCC
Q 018188 231 EAKIVVSSCGHDG 243 (359)
Q Consensus 231 ~A~~VIlAtGg~s 243 (359)
.+|.||+|||+..
T Consensus 150 ~~d~lviATGs~p 162 (483)
T 3dgh_A 150 TAQTFVIAVGGRP 162 (483)
T ss_dssp EEEEEEECCCEEE
T ss_pred EcCEEEEeCCCCc
Confidence 9999999999643
No 106
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.00 E-value=1e-09 Score=102.26 Aligned_cols=112 Identities=10% Similarity=0.173 Sum_probs=73.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.+||+|||||++|+++|+.|++. |.+|+|+|+. .+||.......... + ..+......
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~~~~~~~ 61 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM-EKGGQLTTTTEVEN------------------W---PGDPNDLTG 61 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS-STTGGGGGCSBCCC------------------S---TTCCSSCBH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC-CCCceEecchhhhh------------------C---CCCCCCCCH
Confidence 48999999999999999999999 9999999975 56654322111000 0 000000123
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+...+...+ ++.+++++.++ |..+..+++.+.. .. +..++.+|+||+|||...
T Consensus 62 ~~~~~~~~~~~-~~~~~~~~~~~-v~~i~~~~~~~~v--~~--------------~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 62 PLLMERMHEHA-TKFETEIIFDH-INKVDLQNRPFRL--NG--------------DNGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHHHHHHH-HHTTCEEECCC-EEEEECSSSSEEE--EE--------------SSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHH-HHCCCEEEEee-eeEEEecCCEEEE--Ee--------------CCCEEEcCEEEECCCCCc
Confidence 34455554444 36789999985 8877665554432 21 135799999999999754
No 107
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.00 E-value=1e-09 Score=101.79 Aligned_cols=111 Identities=20% Similarity=0.266 Sum_probs=73.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEE-EeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAI-IEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~v-lEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.+||+|||||++|+++|+.|++. |.+|+| +|| ..+||........... ..+.....
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~-~~~gG~~~~~~~~~~~---------------------~~~~~~~~ 60 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEK-GMPGGQITSSSEIENY---------------------PGVAQVMD 60 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECS-SSTTGGGGGCSCBCCS---------------------TTCCSCBC
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeC-CCCCceeeeeceeccC---------------------CCCCCCCC
Confidence 48999999999999999999999 999999 999 5666643322111100 00100112
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC--CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..++...+...+ ++.+++++++ +|.++ .++ +.+. +.... +. ++.+|+||+|||..
T Consensus 61 ~~~~~~~~~~~~-~~~~v~~~~~-~v~~i-~~~~~~~~~-v~~~~-------------~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 61 GISFMAPWSEQC-MRFGLKHEMV-GVEQI-LKNSDGSFT-IKLEG-------------GK-TELAKAVIVCTGSA 117 (315)
T ss_dssp HHHHHHHHHHHH-TTTCCEEECC-CEEEE-EECTTSCEE-EEETT-------------SC-EEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-HHcCcEEEEE-EEEEE-ecCCCCcEE-EEEec-------------CC-EEEeCEEEEeeCCC
Confidence 345555555444 4789999998 88888 665 4443 21210 12 79999999999963
No 108
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.99 E-value=7.3e-10 Score=110.45 Aligned_cols=52 Identities=31% Similarity=0.517 Sum_probs=43.7
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCCCeEEEEe--------eccCCCCCcccCCcceeehhc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISK-NPSIRVAIIE--------QSVSPGGGAWLGGQLFSAMVV 143 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~vlE--------k~~~~GG~~~~~g~~~~~~~~ 143 (359)
+|||+|||||++|+++|+.|++ . |.+|+||| +...+||.|...|+++...+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~ 63 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMV 63 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHc-CCEEEEEecccccccccCCCcCccccCCCcchhhHHH
Confidence 4899999999999999999999 9 99999999 356788888777776654443
No 109
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.99 E-value=9.8e-11 Score=115.81 Aligned_cols=50 Identities=28% Similarity=0.413 Sum_probs=43.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehh
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMV 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~ 142 (359)
+|||+|||||++|+++|+.|++. |.+|+|||| ..+||.+...|+.+...+
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk-~~~GG~~~~~gcip~k~l 54 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEE-FRYGGTCVIRGCVPKKLY 54 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEEES-SCTTHHHHHHSHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeC-CCCCCcccccCchhhHHH
Confidence 58999999999999999999999 999999999 678888777676655443
No 110
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.99 E-value=1.1e-09 Score=103.29 Aligned_cols=113 Identities=22% Similarity=0.282 Sum_probs=72.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
..+||+|||||++|+++|+.|++. |.+|+|+|+. .+||.......... + ..+.....
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~~~~~~ 69 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT-SFGGALMTTTDVEN------------------Y---PGFRNGIT 69 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS-SCSCGGGSCSCBCC------------------S---TTCTTCBC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCceeccchhhh------------------c---CCCCCCCC
Confidence 458999999999999999999999 9999999976 55654322111000 0 00000012
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEE-EEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGV-VTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv-~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...+...+.+.+. +.|+++++++ |.++.. ++.+. + ... +..++.+|.||+|||...
T Consensus 70 ~~~~~~~l~~~~~-~~~v~~~~~~-v~~i~~-~~~~~-v~~~~--------------~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 70 GPELMDEMREQAL-RFGADLRMED-VESVSL-HGPLK-SVVTA--------------DGQTHRARAVILAMGAAA 126 (335)
T ss_dssp HHHHHHHHHHHHH-HTTCEEECCC-EEEEEC-SSSSE-EEEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHH-HcCCEEEEee-EEEEEe-CCcEE-EEEeC--------------CCCEEEeCEEEECCCCCc
Confidence 3344555554443 5799999986 877765 33221 2 222 235799999999999754
No 111
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.99 E-value=1.5e-09 Score=108.78 Aligned_cols=54 Identities=15% Similarity=0.166 Sum_probs=42.5
Q ss_pred HHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 179 SKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 179 ~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.....+.|++++.++.|..+..++++++||.... . +....+.|+.||+|+|+.+
T Consensus 218 ~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~------~-----~~~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 218 KAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVG------R-----QGSAEVFADQIVLCAGALE 271 (526)
T ss_dssp HHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEE------T-----TEEEEEEEEEEEECSHHHH
T ss_pred ccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEe------c-----CceEEEeecceEEcccccC
Confidence 3344578999999999999999999999987742 1 1236788999999999654
No 112
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.98 E-value=8.8e-10 Score=111.93 Aligned_cols=51 Identities=22% Similarity=0.223 Sum_probs=40.6
Q ss_pred hCCCcEEEcceeeeeEEEe--CCEEEEEEEceeeeeccCCCCCCCCCeEEEc-CEEEEcCCCCC
Q 018188 183 ARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA-KIVVSSCGHDG 243 (359)
Q Consensus 183 ~~~gv~i~~~~~V~~l~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A-~~VIlAtGg~s 243 (359)
++.|++|++++.|++|..+ +++++||.... . ++...+++| +.||+|+|+.+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~------~----~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVT------A----AGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEE------T----TSCEEEEEEEEEEEECSHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe------C----CCcEEEEEeeeEEEEcccccC
Confidence 4679999999999999998 78999998742 1 123467888 67999999764
No 113
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.98 E-value=2e-09 Score=108.74 Aligned_cols=130 Identities=17% Similarity=0.191 Sum_probs=80.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccC---Cccee--ehhcchh-HHHHHHHcCCcceecCCe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLG---GQLFS--AMVVRKP-AQRFLDELGVEYDEQDNY 164 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~---g~~~~--~~~~~~~-~~~~l~~~G~~~~~~~~~ 164 (359)
++||||||||++|+.+|+.|++. |++|+|||+...+||..... |...+ ....... ..+.....+.. ..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~----~~- 94 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWS----EK- 94 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCS----SS-
T ss_pred CCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCc----cC-
Confidence 58999999999999999999998 99999999999888754322 11111 0000000 00111111110 11
Q ss_pred EEEechHHHHHHHHHHHHhCCCc--EEEcceeeeeEEEeCC-EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCC
Q 018188 165 VVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGH 241 (359)
Q Consensus 165 ~~~~~~~~~~~~L~~~~~~~~gv--~i~~~~~V~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg 241 (359)
.....++...+.+.+ ++.++ +++++++|+++..+++ ....|.+. ++.++.||.||+|||.
T Consensus 95 --~~~~~ei~~yl~~~~-~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~--------------~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 95 --YATQPEILAYLEHVA-DRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD--------------RGDEVSARFLVVAAGP 157 (549)
T ss_dssp --SCBHHHHHHHHHHHH-HHTTCGGGEECSCCEEEEEEETTTTEEEEEET--------------TCCEEEEEEEEECCCS
T ss_pred --CCCHHHHHHHHHHHH-HHcCCCccEEECCEEEEEEEcCCCCEEEEEEC--------------CCCEEEeCEEEECcCC
Confidence 112344444443333 45676 7999999999988764 22234442 2357999999999995
Q ss_pred CC
Q 018188 242 DG 243 (359)
Q Consensus 242 ~s 243 (359)
.+
T Consensus 158 ~s 159 (549)
T 4ap3_A 158 LS 159 (549)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 114
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.97 E-value=3.9e-10 Score=113.85 Aligned_cols=131 Identities=19% Similarity=0.226 Sum_probs=78.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccC---Ccceee--hhcchh-HHHHHHHcCCcceecCCe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLG---GQLFSA--MVVRKP-AQRFLDELGVEYDEQDNY 164 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~---g~~~~~--~~~~~~-~~~~l~~~G~~~~~~~~~ 164 (359)
++||+|||||++|+.+|+.|++. |++|+|||+...+||.+..+ +..++. ...... ..+.+..+.. . ..+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~--~--~~~ 90 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNW--T--ERY 90 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCC--C--BSS
T ss_pred CCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCc--c--ccc
Confidence 58999999999999999999999 99999999999888754211 111100 000000 0011111111 1 011
Q ss_pred EEEechHHHHHHHHHHHHhCC--CcEEEcceeeeeEEEeCC-EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCC
Q 018188 165 VVIKHAALFTSTIMSKLLARP--NVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGH 241 (359)
Q Consensus 165 ~~~~~~~~~~~~L~~~~~~~~--gv~i~~~~~V~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg 241 (359)
....++.+.+. ...++. +.+++++++|+++..+++ ....|.+. ++.+++||.||+|||.
T Consensus 91 ---~~~~~i~~yl~-~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~--------------~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 91 ---ASQPEILRYIN-FVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTN--------------HGDRIRARYLIMASGQ 152 (542)
T ss_dssp ---CBHHHHHHHHH-HHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEET--------------TCCEEEEEEEEECCCS
T ss_pred ---CCHHHHHHHHH-HHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEEC--------------CCCEEEeCEEEECcCC
Confidence 12333444433 322333 367899999999988753 22224442 1357999999999997
Q ss_pred CCC
Q 018188 242 DGP 244 (359)
Q Consensus 242 ~s~ 244 (359)
.+.
T Consensus 153 ~s~ 155 (542)
T 1w4x_A 153 LSV 155 (542)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 115
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.97 E-value=3.6e-09 Score=98.18 Aligned_cols=112 Identities=20% Similarity=0.326 Sum_probs=72.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
|||+|||||++|+++|+.|++. |.+|+|||+. .||.+........ + .+.+ + ....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~~--~gG~~~~~~~~~~-~------------~~~~------~---~~~~ 56 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARK-GIRTGLMGER--FGGQILDTVDIEN-Y------------ISVP------K---TEGQ 56 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-TCCEEEECSS--TTGGGGGCCEECC-B------------TTBS------S---EEHH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCC--CCceecccccccc-c------------cCcC------C---CCHH
Confidence 7999999999999999999999 9999999863 4554322111100 0 0000 0 1233
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeC--CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+...+.+.+ ++.|++++.+++|..+..+. +....+.+. +..++.+|.||+|||...
T Consensus 57 ~~~~~~~~~~-~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~--------------~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 57 KLAGALKVHV-DEYDVDVIDSQSASKLIPAAVEGGLHQIETA--------------SGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHH-HTSCEEEECSCCEEEEECCSSTTCCEEEEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHH-HHcCCeEEccCEEEEEEecccCCceEEEEEC--------------CCCEEEeCEEEECcCCCc
Confidence 4455554444 47899999999999886542 112223332 135799999999999643
No 116
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.96 E-value=5.3e-10 Score=110.59 Aligned_cols=135 Identities=15% Similarity=0.195 Sum_probs=80.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHH----HHHcCCcceecC--C
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRF----LDELGVEYDEQD--N 163 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~----l~~~G~~~~~~~--~ 163 (359)
++||+|||||++|+.+|+.|++. |.+|+|||+.+.+||.+...|+.+...+... ...+. +..+|+++.... .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 48999999999999999999999 9999999999889888776666554333221 11122 344565431000 0
Q ss_pred eEE-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcC
Q 018188 164 YVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSC 239 (359)
Q Consensus 164 ~~~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAt 239 (359)
+.. ..+...+.+.+ +....++.|++++.++.+. .+.+.+. |... ++...++.+|.||+||
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~-v~~~------------~G~~~~~~~d~lviAt 144 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF---ETAHSIR-VNGL------------DGKQEMLETKKTIIAT 144 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE---EETTEEE-EEET------------TSCEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---eeCCEEE-EEec------------CCceEEEEcCEEEECC
Confidence 100 00111111111 1222335689999886442 3444432 2221 1112679999999999
Q ss_pred CCC
Q 018188 240 GHD 242 (359)
Q Consensus 240 Gg~ 242 (359)
|..
T Consensus 145 G~~ 147 (468)
T 2qae_A 145 GSE 147 (468)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 117
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.95 E-value=9.2e-10 Score=109.48 Aligned_cols=42 Identities=33% Similarity=0.566 Sum_probs=37.9
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
.++||||||||++||+||+.|+++.|.+|+|+|+++.+||.+
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 358999999999999999999873299999999999999865
No 118
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.95 E-value=5.6e-10 Score=110.61 Aligned_cols=135 Identities=19% Similarity=0.258 Sum_probs=79.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchh-HH---H--HHHHcCCcceec-CC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AQ---R--FLDELGVEYDEQ-DN 163 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~-~~---~--~l~~~G~~~~~~-~~ 163 (359)
++||+|||||++|+.+|+.|++. |.+|+|||+.+.+||.+...|+.+...+.... .. . .+..+|++.... ..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 48999999999999999999999 99999999998898887666665544333211 11 1 333455432100 00
Q ss_pred eEE-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcC
Q 018188 164 YVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSC 239 (359)
Q Consensus 164 ~~~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAt 239 (359)
+.. ..+...+.+.+ +....++.|++++.++.+ .+ +.+.+. |... ++...++.+|+||+||
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~~~~~-v~~~------------~gg~~~~~~d~lViAt 148 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GKNQVT-ATKA------------DGGTQVIDTKNILIAT 148 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ETTEEE-EECT------------TSCEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cCCEEE-EEec------------CCCcEEEEeCEEEECC
Confidence 000 00011111112 123334679999988643 22 444432 2221 0012579999999999
Q ss_pred CCC
Q 018188 240 GHD 242 (359)
Q Consensus 240 Gg~ 242 (359)
|..
T Consensus 149 Gs~ 151 (474)
T 1zmd_A 149 GSE 151 (474)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 119
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.95 E-value=3.6e-09 Score=104.37 Aligned_cols=40 Identities=33% Similarity=0.611 Sum_probs=37.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeeccCCCCCcc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSVSPGGGAW 132 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~~~GG~~~ 132 (359)
+||+|||||++||++|++|+++ |. +|+|+|++..+||.+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCceE
Confidence 6999999999999999999999 99 9999999999988763
No 120
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.94 E-value=5e-09 Score=103.69 Aligned_cols=140 Identities=16% Similarity=0.209 Sum_probs=80.5
Q ss_pred ccEEEECCChHHHHHHHHhhc---CCCCe---EEEEeeccCCCCCcccC---Cc----------ceeehhcchhHHHHHH
Q 018188 92 TDVIVVGAGSAGLSCAYEISK---NPSIR---VAIIEQSVSPGGGAWLG---GQ----------LFSAMVVRKPAQRFLD 152 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~---~~G~~---V~vlEk~~~~GG~~~~~---g~----------~~~~~~~~~~~~~~l~ 152 (359)
+||+|||||++|+++|..|++ . |.+ |+|+|+...+||.+... +. .+........ ...+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~-~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-GAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGP-KECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSC-GGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-CCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCC-hhhcc
Confidence 699999999999999999999 8 999 99999998888754321 11 0100000000 00000
Q ss_pred HcCCcceecC--CeEEEechHHHHHHHHHHHHhCCCcE--EEcceeeeeEEEeCC--EEEEEEEceeeeeccCCCCCCCC
Q 018188 153 ELGVEYDEQD--NYVVIKHAALFTSTIMSKLLARPNVK--LFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMD 226 (359)
Q Consensus 153 ~~G~~~~~~~--~~~~~~~~~~~~~~L~~~~~~~~gv~--i~~~~~V~~l~~~~~--~v~gv~~~~~~~~~~~~~~~~g~ 226 (359)
-.+.++.... ......+...+.+.+...+ ++.|++ ++++++|+.+..+++ .+. |.+.+ .. ++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~gv~~~i~~~~~V~~v~~~~~~~~~~-V~~~~------~~---~g~ 149 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRV-EKAGVRKYIRFNTAVRHVEFNEDSQTFT-VTVQD------HT---TDT 149 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHH-HHHTCGGGEECSEEEEEEEEETTTTEEE-EEEEE------TT---TTE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHH-HHcCCcceEEeCCEEEEEEEcCCCCcEE-EEEEE------cC---CCc
Confidence 0001111000 0011123445555554444 356787 899999999988764 332 33321 00 111
Q ss_pred CeEEEcCEEEEcCCCCCC
Q 018188 227 PNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 227 ~~~i~A~~VIlAtGg~s~ 244 (359)
..++.+|.||+|||+++.
T Consensus 150 ~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp EEEEEESEEEECCCSSSS
T ss_pred eEEEEcCEEEECCCCCCC
Confidence 257899999999997653
No 121
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.94 E-value=1.7e-09 Score=108.02 Aligned_cols=48 Identities=31% Similarity=0.485 Sum_probs=41.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceee
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSA 140 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~ 140 (359)
++||+|||||++|+.+|+.|++. |.+|+|||++ ..||.|...|+.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~c~~~gc~P~k 49 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKS-RLGGTCVNVGCVPKK 49 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-STTHHHHHTSHHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCC-CcCccccccCCcchH
Confidence 48999999999999999999999 9999999998 477777666665443
No 122
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.94 E-value=1.6e-09 Score=107.49 Aligned_cols=132 Identities=16% Similarity=0.241 Sum_probs=79.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHHH----HHcCCcceecCCeE
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRFL----DELGVEYDEQDNYV 165 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~l----~~~G~~~~~~~~~~ 165 (359)
++||+|||||++|+++|+.|++. |++|+|||+...+||.+...|+.....++.. ...+.+ ..+|+++. ...
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~--~~~- 80 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN--GDI- 80 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC--SCE-
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC--CCC-
Confidence 58999999999999999999999 9999999998888887766665544333221 111222 22343321 000
Q ss_pred EEec------hHH----HHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeE------
Q 018188 166 VIKH------AAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV------ 229 (359)
Q Consensus 166 ~~~~------~~~----~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~------ 229 (359)
.... ... +...+.+.+ ++.|++++.++.+.. +++.+. |... ++...+
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~~---~~~~v~-V~~~------------~G~~~~~~~~~~ 143 (478)
T 1v59_A 81 KINVANFQKAKDDAVKQLTGGIELLF-KKNKVTYYKGNGSFE---DETKIR-VTPV------------DGLEGTVKEDHI 143 (478)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESEEEES---SSSEEE-EECC------------TTCTTCCSSCEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEEEc---cCCeEE-EEec------------CCCcccccccce
Confidence 1110 011 111222233 457999999976542 334332 3221 111134
Q ss_pred EEcCEEEEcCCCCC
Q 018188 230 MEAKIVVSSCGHDG 243 (359)
Q Consensus 230 i~A~~VIlAtGg~s 243 (359)
+++|+||+|||+..
T Consensus 144 i~~d~lViAtGs~p 157 (478)
T 1v59_A 144 LDVKNIIVATGSEV 157 (478)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEECcCCCC
Confidence 99999999999654
No 123
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.93 E-value=4.7e-09 Score=102.98 Aligned_cols=40 Identities=28% Similarity=0.607 Sum_probs=37.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC------CeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPS------IRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G------~~V~vlEk~~~~GG~~ 131 (359)
.+||+|||||++||+||+.|+++ | .+|+|+|+.+.+||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCCceE
Confidence 37999999999999999999998 8 9999999999898754
No 124
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.92 E-value=5.4e-10 Score=111.02 Aligned_cols=50 Identities=22% Similarity=0.358 Sum_probs=42.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeeh
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAM 141 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~ 141 (359)
.++||+|||||++|+.+|+.|++. |.+|+|||++ ..||.+...|+++...
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~n~gciP~k~ 59 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAK-ALGGTCVNVGCVPKKV 59 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESS-CTTHHHHHHSHHHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCC-CcCCcCcccCcHHHHH
Confidence 358999999999999999999999 9999999997 5777776666554433
No 125
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.92 E-value=4.9e-10 Score=110.86 Aligned_cols=130 Identities=18% Similarity=0.242 Sum_probs=76.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHH---HHHcCCcceecCCeE-
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRF---LDELGVEYDEQDNYV- 165 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~---l~~~G~~~~~~~~~~- 165 (359)
++||+|||||++|+.+|..|++. |.+|+|||+.. .||.+...++.+...++.. ...+. +..+|++-....++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 83 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKK 83 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHH
Confidence 58999999999999999999999 99999999987 7877766666554433221 11122 223344300000000
Q ss_pred EEechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 166 VIKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 166 ~~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
+..+...+.+.+ +....++.|++++.++.+. .+...+ .+. ..++++|+||+|||..
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v---~v~---------------g~~~~~d~lViATGs~ 142 (464)
T 2eq6_A 84 LGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL---VGPKEV---EVG---------------GERYGAKSLILATGSE 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE---EETTEE---EET---------------TEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE---ccCCEE---EEc---------------cEEEEeCEEEEcCCCC
Confidence 000111122222 2223345799999886442 244432 221 2569999999999964
Q ss_pred C
Q 018188 243 G 243 (359)
Q Consensus 243 s 243 (359)
.
T Consensus 143 p 143 (464)
T 2eq6_A 143 P 143 (464)
T ss_dssp E
T ss_pred C
Confidence 3
No 126
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.92 E-value=6.5e-09 Score=102.39 Aligned_cols=132 Identities=23% Similarity=0.311 Sum_probs=77.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHH---HHHcCCcceec-CCeE
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRF---LDELGVEYDEQ-DNYV 165 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~---l~~~G~~~~~~-~~~~ 165 (359)
++||+|||||++|+.+|+.|++. |.+|+|||+. .+||.+...++.+...+... ...+. +..+|+++... ..+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 48999999999999999999999 9999999998 67777665555443322221 11111 22234332110 0000
Q ss_pred E-EechHH----HHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCC-eEEEcCEEEEcC
Q 018188 166 V-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDP-NVMEAKIVVSSC 239 (359)
Q Consensus 166 ~-~~~~~~----~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~-~~i~A~~VIlAt 239 (359)
. ..+... +...+ ....++.|++++.++.+. .+.+.+. |... +. .++.+|.||+||
T Consensus 81 ~~~~~~~~~~~~l~~~~-~~~~~~~gv~~~~g~~~~---id~~~v~-V~~~--------------~G~~~i~~d~lViAT 141 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGV-EGLLKGNKVEIVKGEAYF---VDANTVR-VVNG--------------DSAQTYTFKNAIIAT 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHTTTCEEEESEEEE---EETTEEE-EEET--------------TEEEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhCCCEEEEEEEEE---ccCCeEE-EEeC--------------CCcEEEEeCEEEEec
Confidence 0 001111 12222 233347899999987543 3455433 3221 12 569999999999
Q ss_pred CCCC
Q 018188 240 GHDG 243 (359)
Q Consensus 240 Gg~s 243 (359)
|...
T Consensus 142 Gs~p 145 (455)
T 1ebd_A 142 GSRP 145 (455)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9643
No 127
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.92 E-value=2e-09 Score=102.48 Aligned_cols=38 Identities=26% Similarity=0.516 Sum_probs=34.3
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPG 128 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~G 128 (359)
.++||+|||||++|+++|+.|+++ |.+|+||||....+
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLPED 42 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCCCC
Confidence 358999999999999999999999 99999999986443
No 128
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.92 E-value=4.1e-09 Score=103.82 Aligned_cols=50 Identities=24% Similarity=0.352 Sum_probs=42.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehh
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMV 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~ 142 (359)
++||+|||||++|+.+|+.|++. |.+|+|||++ ..||.|...|+.+...+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~~~gciP~k~l 53 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAK-ELGGTCVNVGCVPKKVM 53 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCC-CCCCcccccCccChHHH
Confidence 48999999999999999999998 9999999998 67887776666655443
No 129
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.91 E-value=1.4e-09 Score=107.88 Aligned_cols=52 Identities=29% Similarity=0.400 Sum_probs=44.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVV 143 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~ 143 (359)
.++||+|||||++|+.+|+.|++. |.+|+|||+. ..||.++..|+.+...+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~-~~GG~~~~~gc~p~k~l~ 70 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-GARAAVVESH-KLGGTCVNVGCVPKKVMW 70 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHHSHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCcccccCccchHHHH
Confidence 459999999999999999999999 9999999976 678888777776654443
No 130
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.91 E-value=6.2e-09 Score=102.75 Aligned_cols=43 Identities=28% Similarity=0.471 Sum_probs=37.2
Q ss_pred ccCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 88 TYADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 88 ~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
....+||+|||||++|+++|+.|++. |.+|+|+|+...+||.+
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGGAV 55 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSBTTC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCcee
Confidence 34458999999999999999999999 99999999999998865
No 131
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.89 E-value=4.1e-10 Score=106.81 Aligned_cols=46 Identities=26% Similarity=0.418 Sum_probs=38.6
Q ss_pred cEEEECCChHHHHHHHHhhcCCC------CeEEEEeeccCCCCCcccCCccee
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPS------IRVAIIEQSVSPGGGAWLGGQLFS 139 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G------~~V~vlEk~~~~GG~~~~~g~~~~ 139 (359)
||+|||||++|+++|+.|+++ | .+|+|||+....+|.+..+++.+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~ 53 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRFTPLTTTDVAAGLWQ 53 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSCGGGSGGGTCCCBCC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCCCCCCccccCcceee
Confidence 899999999999999999998 7 999999999766666655554443
No 132
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.87 E-value=4.3e-09 Score=103.92 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=76.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHHHH----HcCCcceec-CCe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRFLD----ELGVEYDEQ-DNY 164 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~l~----~~G~~~~~~-~~~ 164 (359)
++||+|||||++|+++|+.|++. |.+|+|||+. ..||.+...++.....++.. ...+.+. .+|++ ... ..+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-ECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CCCccCH
Confidence 48999999999999999999999 9999999998 66766555454433222221 1112222 22332 000 000
Q ss_pred EEE-echH----HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcC
Q 018188 165 VVI-KHAA----LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSC 239 (359)
Q Consensus 165 ~~~-~~~~----~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAt 239 (359)
... .+.. .+...+.+.+ ++.|++++.++.+. .+++.+. +... ++...++.+|.||+||
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~-~~~gv~~~~g~~~~---id~~~v~-V~~~------------~G~~~~~~~d~lViAt 142 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLM-KKNKITEIHGYGTF---ADANTLL-VDLN------------DGGTESVTFDNAIIAT 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHTTCEEECEEEEE---SSSSEEE-EEET------------TSCCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEeEEEE---ecCCeEE-EEeC------------CCceEEEEcCEEEECC
Confidence 000 0001 1122233333 35799999987543 2444433 3221 1112679999999999
Q ss_pred CCCC
Q 018188 240 GHDG 243 (359)
Q Consensus 240 Gg~s 243 (359)
|+.+
T Consensus 143 G~~~ 146 (464)
T 2a8x_A 143 GSST 146 (464)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9654
No 133
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.87 E-value=1.2e-09 Score=96.96 Aligned_cols=40 Identities=28% Similarity=0.523 Sum_probs=37.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
++||+||||||+||+||+.|+++ |++|+|+||.+.+||..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCcc
Confidence 48999999999999999999999 99999999999998754
No 134
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.87 E-value=9.7e-10 Score=108.90 Aligned_cols=43 Identities=35% Similarity=0.535 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLG 134 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~ 134 (359)
+|||+|||||++|+++|+.|++. |.+|+||||...+||....+
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~gG~~~~G 45 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEGKTALG 45 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBCTTSSBCCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCccCCCCCcC
Confidence 59999999999999999999999 99999999998655554333
No 135
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.86 E-value=1.2e-08 Score=102.50 Aligned_cols=115 Identities=18% Similarity=0.310 Sum_probs=75.3
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEe
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIK 168 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 168 (359)
...+||+|||||++|+++|+.|++. |.+|+|+|+. .||.+......... .+.++ .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~~--~GG~~~~~~~~~~~-------------~~~~~---------~ 264 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGER--FGGQVLDTVDIENY-------------ISVPK---------T 264 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS--TTGGGTTCSCBCCB-------------TTBSS---------B
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEECC--CCCccccccccccc-------------CCCCC---------C
Confidence 3468999999999999999999999 9999999863 55543221111000 00000 1
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC--CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
....+...+.+.+ ++.|++++.+++|..+..+. +....|.+. +..++++|.||+|||...
T Consensus 265 ~~~~l~~~l~~~~-~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~--------------~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 265 EGQKLAGALKAHV-SDYDVDVIDSQSASKLVPAATEGGLHQIETA--------------SGAVLKARSIIIATGAKW 326 (521)
T ss_dssp CHHHHHHHHHHHH-HTSCEEEECSCCEEEEECCSSTTSCEEEEET--------------TSCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHH-HHcCCEEEcCCEEEEEEeccCCCceEEEEEC--------------CCCEEEcCEEEECCCCCc
Confidence 2344555555555 47899999999999886431 112223332 135799999999999643
No 136
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.86 E-value=2.9e-09 Score=106.23 Aligned_cols=49 Identities=29% Similarity=0.458 Sum_probs=41.2
Q ss_pred cccEEEECCChHHHHHHHHhhcC-C-CCeEEEEeeccCCCCCcccCCcceee
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKN-P-SIRVAIIEQSVSPGGGAWLGGQLFSA 140 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~-~-G~~V~vlEk~~~~GG~~~~~g~~~~~ 140 (359)
++||||||||++|+++|+.|++. | |.+|+|||+.. +||.+...|+.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk 52 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSK 52 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchH
Confidence 38999999999999999999885 3 89999999998 88877766665543
No 137
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.85 E-value=3.4e-09 Score=104.60 Aligned_cols=129 Identities=16% Similarity=0.269 Sum_probs=78.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHHHHH------cCCcceecC-
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRFLDE------LGVEYDEQD- 162 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~l~~------~G~~~~~~~- 162 (359)
++||+|||||++|+.+|+.|++. |.+|+|||+ ..+||.++..++.+...++.. ...+.+.. +|+++....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-TCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 48999999999999999999999 999999999 678888776666554433322 12222222 454432110
Q ss_pred CeEE-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEc
Q 018188 163 NYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSS 238 (359)
Q Consensus 163 ~~~~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlA 238 (359)
++.. ..+...+.+.+ .....++.|++++.++.+. .++..+ .+. ..++.+|+||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~---~~~~~v---~v~---------------~~~~~~d~lviA 141 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV---LDGKQV---EVD---------------GQRIQCEHLLLA 141 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE---EETTEE---EET---------------TEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE---ccCCEE---EEe---------------eEEEEeCEEEEe
Confidence 0100 00111111211 2233346799999986543 244332 221 156999999999
Q ss_pred CCCC
Q 018188 239 CGHD 242 (359)
Q Consensus 239 tGg~ 242 (359)
||..
T Consensus 142 TGs~ 145 (458)
T 1lvl_A 142 TGSS 145 (458)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 9964
No 138
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.85 E-value=1.8e-08 Score=100.85 Aligned_cols=41 Identities=29% Similarity=0.583 Sum_probs=37.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
.+||||||||++||+||+.|++. |.+|+|+|+++.+||.+.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcee
Confidence 47999999999999999999999 999999999999988653
No 139
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.84 E-value=3.7e-08 Score=97.77 Aligned_cols=40 Identities=28% Similarity=0.521 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
++||+|||||++||+||+.|++. |.+|+|+|+.+.+||.+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIGGRS 78 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcc
Confidence 47999999999999999999999 99999999999998765
No 140
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.84 E-value=4.9e-09 Score=104.49 Aligned_cols=52 Identities=25% Similarity=0.405 Sum_probs=45.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVR 144 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~ 144 (359)
+|||+|||||++|+.+|+.|++. |.+|+|||++ .+||.|...|+.+...++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~-~~GGtc~~~gciPsk~l~~ 59 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGG-AYGTTCARVGCMPSKLLIA 59 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESS-CSSCHHHHHSHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCC-CCCCcccccChhcCHHHHH
Confidence 58999999999999999999999 9999999997 4899888878776655443
No 141
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.84 E-value=9.8e-10 Score=105.67 Aligned_cols=124 Identities=15% Similarity=0.104 Sum_probs=75.4
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCC---CCCcccCCcceeehhcchhHH-HH-HHH------------c
Q 018188 93 DVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSP---GGGAWLGGQLFSAMVVRKPAQ-RF-LDE------------L 154 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~---GG~~~~~g~~~~~~~~~~~~~-~~-l~~------------~ 154 (359)
||+|||||++|+++|+.|++. ||++|+|+||.+.+ |.+....+..... ....... +. +.. .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQH-PANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTC-TTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHh-hcCcchhhhhhHHHhhccccceEEEeC
Confidence 899999999999999999984 58999999998766 3222111111100 0000000 00 000 0
Q ss_pred CCcceec-CCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcC
Q 018188 155 GVEYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 233 (359)
Q Consensus 155 G~~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~ 233 (359)
|..+... +......+...+.+.|.+.+. +.|++++++++|+++... .+++||
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~gv~i~~~~~v~~i~~~--------------------------~~~~ad 133 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCR-SQGIAIRFESPLLEHGEL--------------------------PLADYD 133 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHH-HTTCEEETTCCCCSGGGC--------------------------CGGGCS
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHH-HCCCEEEeCCEeccchhc--------------------------ccccCC
Confidence 1111111 111234566778888887776 459999999999887321 125789
Q ss_pred EEEEcCCCCCC
Q 018188 234 IVVSSCGHDGP 244 (359)
Q Consensus 234 ~VIlAtGg~s~ 244 (359)
.||.|+|..+.
T Consensus 134 ~vV~AdG~~S~ 144 (381)
T 3c4a_A 134 LVVLANGVNHK 144 (381)
T ss_dssp EEEECCGGGGG
T ss_pred EEEECCCCCch
Confidence 99999997764
No 142
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.81 E-value=5.1e-09 Score=103.15 Aligned_cols=48 Identities=27% Similarity=0.466 Sum_probs=42.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceee
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSA 140 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~ 140 (359)
|||+|||||++|+.+|+.|++. |.+|+|||+.+.+||.+...|+.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~g~~p~k 49 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKALGGTCLRVGCIPSK 49 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCCCCccceecchhHH
Confidence 7999999999999999999999 99999999998888887766665543
No 143
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.80 E-value=1.3e-08 Score=102.25 Aligned_cols=129 Identities=13% Similarity=0.121 Sum_probs=78.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcch-hHHHHHH---HcCCcceecCCeE
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAQRFLD---ELGVEYDEQDNYV 165 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~-~~~~~l~---~~G~~~~~~~~~~ 165 (359)
.++||+|||||++|+++|+.|++. |.+|+|||+...+||.+...++.+...+... .....+. .+|+ |.....+
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~-~~~~~~~- 118 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYW-FPDMTEK- 118 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTT-CCCCTTC-
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCc-HHHHHhh-
Confidence 458999999999999999999999 9999999999878887766555443322221 1111121 1222 1110000
Q ss_pred EEechHHHHHHHHH------HHH-----hCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCE
Q 018188 166 VIKHAALFTSTIMS------KLL-----ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKI 234 (359)
Q Consensus 166 ~~~~~~~~~~~L~~------~~~-----~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~ 234 (359)
......+...+.. ... ++.|+++++..++..+ +...+ .+. ...+.+|.
T Consensus 119 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i--~~~~v---~~~---------------g~~~~~d~ 177 (523)
T 1mo9_A 119 -VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVI--DNHTV---EAA---------------GKVFKAKN 177 (523)
T ss_dssp -CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEE--ETTEE---EET---------------TEEEEBSC
T ss_pred -hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEe--eCCEE---EEC---------------CEEEEeCE
Confidence 0012333333321 222 5789999855566655 33332 221 25699999
Q ss_pred EEEcCCCC
Q 018188 235 VVSSCGHD 242 (359)
Q Consensus 235 VIlAtGg~ 242 (359)
||+|||..
T Consensus 178 lViATGs~ 185 (523)
T 1mo9_A 178 LILAVGAG 185 (523)
T ss_dssp EEECCCEE
T ss_pred EEECCCCC
Confidence 99999964
No 144
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.78 E-value=2.6e-08 Score=98.51 Aligned_cols=41 Identities=20% Similarity=0.325 Sum_probs=37.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
.++||+|||+|++|+.+|+.|++. |.+|+++||++..||.+
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGGET 59 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCCCc
Confidence 359999999999999999999999 99999999999888653
No 145
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.77 E-value=2.3e-09 Score=107.01 Aligned_cols=51 Identities=27% Similarity=0.457 Sum_probs=42.3
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCCCeEEEEe--------eccCCCCCcccCCcceeehh
Q 018188 91 DTDVIVVGAGSAGLSCAYEISK-NPSIRVAIIE--------QSVSPGGGAWLGGQLFSAMV 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~vlE--------k~~~~GG~~~~~g~~~~~~~ 142 (359)
++||+|||||++|+.+|+.|++ . |.+|+||| +...+||.+...|+++...+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l 66 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLM 66 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecccccccccCCCCCCeeecCCcchHHHH
Confidence 5899999999999999999999 9 99999999 35567887776666554433
No 146
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.77 E-value=9e-09 Score=104.27 Aligned_cols=37 Identities=41% Similarity=0.663 Sum_probs=33.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSP 127 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~ 127 (359)
+||+||||||.+|+.+|.+|++.++.+|+|||++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999999559999999998643
No 147
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.76 E-value=2e-08 Score=99.24 Aligned_cols=129 Identities=19% Similarity=0.241 Sum_probs=75.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchh-HHHHHH---HcCCcceec-CCeE
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AQRFLD---ELGVEYDEQ-DNYV 165 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~-~~~~l~---~~G~~~~~~-~~~~ 165 (359)
++||+|||||++|+.+|+.|++. |.+|+|||+. .+||.+...|+.+...+.... ....+. .+|+..... .++.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 58999999999999999999998 9999999998 678777666665544332211 112222 233322110 0010
Q ss_pred E-EechHHHHHHH---HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCC
Q 018188 166 V-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGH 241 (359)
Q Consensus 166 ~-~~~~~~~~~~L---~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg 241 (359)
. ..+...+.+.+ +....++.|++++.++ +..+ +...+. +. ..++.+|.||+|||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~v~---~~---------------g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFV--DAHTIE---VE---------------GQRLSADHIVIATGG 140 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEE--ETTEEE---ET---------------TEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEc--cCCEEE---EC---------------CEEEEcCEEEECCCC
Confidence 0 00111112221 1222245789998884 3322 333322 21 257899999999996
Q ss_pred C
Q 018188 242 D 242 (359)
Q Consensus 242 ~ 242 (359)
.
T Consensus 141 ~ 141 (463)
T 2r9z_A 141 R 141 (463)
T ss_dssp E
T ss_pred C
Confidence 4
No 148
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.76 E-value=2.7e-08 Score=101.95 Aligned_cols=38 Identities=29% Similarity=0.496 Sum_probs=35.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGG 129 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG 129 (359)
++||||||||++|+.+|+.|++. |++|+|||+....||
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSG 83 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCC
Confidence 58999999999999999999999 999999999987765
No 149
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.74 E-value=5.6e-08 Score=95.83 Aligned_cols=40 Identities=25% Similarity=0.558 Sum_probs=36.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPS--IRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~vlEk~~~~GG~~ 131 (359)
.+||+|||||++|+++|+.|++. | .+|+|+|+...+||.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCCCcee
Confidence 47999999999999999999998 8 9999999998888743
No 150
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.73 E-value=2.8e-08 Score=99.03 Aligned_cols=112 Identities=28% Similarity=0.335 Sum_probs=75.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.++||+|||||++|+++|+.|++. .+|+|||+.+.+||..+.....+ +|++. .
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~~~GG~~~~~~~~~---------------~g~~~----------~ 159 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY--LTVALIEERGWLGGDMWLKGIKQ---------------EGFNK----------D 159 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT--CCEEEECTTSSSSCSGGGTCSEE---------------TTTTE----------E
T ss_pred ccCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCCCCCCeeecccccc---------------CCCCC----------C
Confidence 358999999999999999999987 99999999998887654321100 11110 2
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..++...+.+.+ +.+++++.++.|.++..+++.+....... ++...+.+|.+|+|||..
T Consensus 160 ~~~~~~~l~~~l--~~~v~~~~~~~v~~i~~~~~~~~~~~~~~------------~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 160 SRKVVEELVGKL--NENTKIYLETSALGVFDKGEYFLVPVVRG------------DKLIEILAKRVVLATGAI 218 (493)
T ss_dssp HHHHHHHHHHTC--CTTEEEETTEEECCCEECSSSEEEEEEET------------TEEEEEEESCEEECCCEE
T ss_pred HHHHHHHHHHHH--hcCCEEEcCCEEEEEEcCCcEEEEEEecC------------CeEEEEECCEEEECCCCC
Confidence 233344443333 56999999999999877665443222110 012468999999999964
No 151
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.71 E-value=1.5e-08 Score=99.22 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 47999999999999999999999 99999999986
No 152
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.69 E-value=1.7e-08 Score=99.16 Aligned_cols=109 Identities=17% Similarity=0.234 Sum_probs=63.9
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
+||+|||||++|+++|+.|++. ++.+|+|+|+.+..++... ++++.... . ...
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~----------------------~~p~~~~~-~---~~~ 57 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC----------------------GIPYVVEG-L---STP 57 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------------------------
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc----------------------CCccccCC-C---CCH
Confidence 7999999999999999999874 3789999999986542110 00000000 0 000
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..+.....+.+.++.|++++++++|+.+..+ .. .+... +...++.+|.||+|||+.
T Consensus 58 ~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~--~~-~v~~~-------------~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 58 DKLMYYPPEVFIKKRGIDLHLNAEVIEVDTG--YV-RVREN-------------GGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp --------CTHHHHTTCEEETTCEEEEECSS--EE-EEECS-------------SSEEEEECSEEEECCCEE
T ss_pred HHhhhcCHHHHHHhcCcEEEecCEEEEEecC--CC-EEEEC-------------CceEEEEcCEEEECCCCC
Confidence 1111112233333579999999999887432 21 12221 012479999999999954
No 153
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.69 E-value=1.5e-07 Score=91.41 Aligned_cols=138 Identities=22% Similarity=0.246 Sum_probs=94.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|.+. |.+|+++|+.+.+-.. .+ ..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~l~~--------------------------~~-----------~~ 194 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRVLAR--------------------------VA-----------GE 194 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTT--------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCchhhh--------------------------hc-----------CH
Confidence 5799999999999999999999 9999999998754110 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
.+.+.+.+. .++.|++++++++|.++..+++++.+|.+. ++.++.||.||+|+|.... ..
T Consensus 195 ~~~~~l~~~-l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~--------------dG~~i~aD~Vv~a~G~~p~-----~~ 254 (415)
T 3lxd_A 195 ALSEFYQAE-HRAHGVDLRTGAAMDCIEGDGTKVTGVRMQ--------------DGSVIPADIVIVGIGIVPC-----VG 254 (415)
T ss_dssp HHHHHHHHH-HHHTTCEEEETCCEEEEEESSSBEEEEEES--------------SSCEEECSEEEECSCCEES-----CH
T ss_pred HHHHHHHHH-HHhCCCEEEECCEEEEEEecCCcEEEEEeC--------------CCCEEEcCEEEECCCCccC-----hH
Confidence 223333333 346899999999999998877788788774 2367999999999995442 22
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEee
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEI 298 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~ 298 (359)
.+...|+... .++.++. . .+.-.|++|..|..+...
T Consensus 255 l~~~~gl~~~----~gi~vd~--~-----~~t~~~~iyA~GD~a~~~ 290 (415)
T 3lxd_A 255 ALISAGASGG----NGVDVDE--F-----CRTSLTDVYAIGDCAAHA 290 (415)
T ss_dssp HHHHTTCCCS----SSEECCT--T-----CBCSSTTEEECGGGEEEE
T ss_pred HHHhCCCCcC----CCEEECC--C-----CCcCCCCEEEEEeeeeec
Confidence 3555555211 1233331 1 122359999999766554
No 154
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.68 E-value=3.2e-08 Score=97.87 Aligned_cols=120 Identities=14% Similarity=0.136 Sum_probs=61.2
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.||+|||||++|+++|+.|++. +|.+|+|||+.+.++... .++.. + ++-.+....... ...
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~---~gl~~----------~---~~g~~~~~~~~~--~~~ 65 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGG---CGIPY----------Y---VSGEVSNIESLQ--ATP 65 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccc---cccch----------h---hcCCCCchHHhc--ccc
Confidence 6999999999999999999874 479999999998653110 00000 0 000000000000 000
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..+ ....+.+.++.|++++++++|+++..+++.+. +... .++....+.+|.+|+|||..
T Consensus 66 ~~~-~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~-~~~~-----------~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 66 YNV-VRDPEFFRINKDVEALVETRAHAIDRAAHTVE-IENL-----------RTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ----------------CEEECSEEEEEEETTTTEEE-EEET-----------TTCCEEEEECSEEEECCCEE
T ss_pred chh-ccCHHHHhhhcCcEEEECCEEEEEECCCCEEE-Eeec-----------CCCCEEEEECCEEEEeCCCC
Confidence 001 11123333357899999999999876666543 2210 01123579999999999953
No 155
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.68 E-value=6.5e-08 Score=101.35 Aligned_cols=38 Identities=37% Similarity=0.681 Sum_probs=36.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGG 129 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG 129 (359)
.+||+|||||++|+++|+.|++. |.+|+|+|+...+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccceec
Confidence 47999999999999999999999 999999999988887
No 156
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.68 E-value=4.6e-08 Score=99.70 Aligned_cols=35 Identities=34% Similarity=0.561 Sum_probs=32.3
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeec
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
...+||+|||||++|+.+|..|++. |.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 3469999999999999999999999 9999999983
No 157
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.68 E-value=8.7e-08 Score=102.93 Aligned_cols=125 Identities=21% Similarity=0.220 Sum_probs=77.8
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.++||||||+|++|+.+|+.|++. |++|+|||+.+.+||.++. . ....+. . ..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~-G~~V~lie~~~~~GG~~~~-~---~k~~i~------------------~----~~ 179 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS-GARVMLLDERAEAGGTLLD-T---AGEQID------------------G----MD 179 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGGGGG-S---SCCEET------------------T----EE
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCceecc-C---CccccC------------------C----CC
Confidence 358999999999999999999999 9999999999888876552 1 000000 0 01
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCC-CCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT-QSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~-~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..++...+.+.+.+..+++++.+++|.++.. ++.+..+......+...... ....+..++.+|.||+|||..
T Consensus 180 ~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~-~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 180 SSAWIEQVTSELAEAEETTHLQRTTVFGSYD-ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHHHHHSTTEEEESSEEEEEEET-TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHhhcCCcEEEeCCEEEeeec-CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 2233455555665456999999999988753 34444332210000000000 000112478999999999964
No 158
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.67 E-value=4.9e-08 Score=94.89 Aligned_cols=109 Identities=18% Similarity=0.163 Sum_probs=68.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCe--EEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEE
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIR--VAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVI 167 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~--V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~ 167 (359)
..+||||||||++|+++|+.|++. |.+ |+|+|+.+.++.... .+...+. . + ..... .+ .
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~~y~~~---~l~~~~~---------~--~-~~~~~-~~--~ 68 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-GFEGRVLVIGREPEIPYERP---PLSKEYL---------A--R-EKTFE-RI--C 68 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCSCEEEEESSSSCCBCSG---GGGTTTT---------T--T-SSCSG-GG--B
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CcCCCEEEEecCCCCCcCcc---cCCHHHH---------c--C-CCCHH-Hh--c
Confidence 358999999999999999999998 877 999999876532110 0000000 0 0 00000 00 0
Q ss_pred echHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 168 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 168 ~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
... .+.+ ++.+++++.+++|..+..++..+ ... +...+.+|.+|+|||+.
T Consensus 69 ~~~-------~~~~-~~~~i~~~~~~~v~~id~~~~~v---~~~--------------~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 69 IRP-------AQFW-EDKAVEMKLGAEVVSLDPAAHTV---KLG--------------DGSAIEYGKLIWATGGD 118 (415)
T ss_dssp SSC-------HHHH-HHTTEEEEETCCEEEEETTTTEE---EET--------------TSCEEEEEEEEECCCEE
T ss_pred cCC-------HHHH-HHCCcEEEeCCEEEEEECCCCEE---EEC--------------CCCEEEeeEEEEccCCc
Confidence 000 1122 35799999999999886554433 232 23679999999999954
No 159
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.67 E-value=4.1e-08 Score=96.36 Aligned_cols=112 Identities=17% Similarity=0.173 Sum_probs=66.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCC--CeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPS--IRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G--~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.|||||||++|+.||..|++. | .+|+|||+.+..+... .++ ..++. +...+..... ....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~~~~~~---~~l----------~~~~~--~~~~~~~~~~--~~~~ 63 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRDMSFAN---CAL----------PYVIG--EVVEDRRYAL--AYTP 63 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSCSSBCG---GGH----------HHHHT--TSSCCGGGTB--CCCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCCc---chh----------HHHHc--CCccchhhhh--hcCH
Confidence 599999999999999999986 5 6799999987543211 000 00110 0000000000 0011
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
. .+.++.+++++.+++|+.+..+...+. +... ..++..++.+|++|+|||..
T Consensus 64 ----~----~~~~~~~i~~~~~~~V~~id~~~~~~~-~~~~-----------~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 64 ----E----KFYDRKQITVKTYHEVIAINDERQTVS-VLNR-----------KTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp ----H----HHHHHHCCEEEETEEEEEEETTTTEEE-EEET-----------TTTEEEEEECSEEEECCCEE
T ss_pred ----H----HHHHhcCCEEEeCCeEEEEEccCcEEE-EEec-----------cCCceEEEEcCEEEECCCCc
Confidence 1 122346899999999998865555443 2211 01134678999999999964
No 160
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.66 E-value=7e-08 Score=97.43 Aligned_cols=58 Identities=21% Similarity=0.245 Sum_probs=43.0
Q ss_pred HHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcC-EEEEcCCCC
Q 018188 176 TIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAK-IVVSSCGHD 242 (359)
Q Consensus 176 ~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~-~VIlAtGg~ 242 (359)
.++..+.++.|++|++++.|++|+.++ +++.||.+.. .. .+...+++|+ .||+|+|+.
T Consensus 213 a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~------~~---~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 213 SYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVD------SA---FGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEES------ST---TSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEE------CC---CCcEEEEEeCccEEEecCcc
Confidence 334444446799999999999999987 8899988741 10 1234689998 999999975
No 161
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.66 E-value=1.4e-07 Score=94.09 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=81.5
Q ss_pred cccEEEECCChHHHHHHHHhhcC-------------CCCeEEEEeeccCCCCCcccCCcceeehh---------------
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKN-------------PSIRVAIIEQSVSPGGGAWLGGQLFSAMV--------------- 142 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~-------------~G~~V~vlEk~~~~GG~~~~~g~~~~~~~--------------- 142 (359)
-|||||||+||+||++|+.|.+. ++..++.+||.+..+ |..|.++....
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~---Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA---WHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC---SSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC---cCCCCCCCCccccccchhhhccccCC
Confidence 38999999999999999998753 135677888876553 43333221100
Q ss_pred -cchhHHHHHHHcCCcceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCC-------EEEEEEEceee
Q 018188 143 -VRKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-------RVGGVVTNWAL 214 (359)
Q Consensus 143 -~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~-------~v~gv~~~~~~ 214 (359)
..-....+|.+.|--++............++.+.| +.+.++.+..++++++|+++...+. ...-|.+.
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl-~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~--- 191 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYM-RWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSR--- 191 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHH-HHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEE---
T ss_pred CCccchHHHHHHhCCccCCccccCCCCCHHHHHHHH-HHHHHHcCCceEcceEEEeeccccccccccccceEEEEEe---
Confidence 01124566665553221110001112334555554 4445567778999999999987542 12223332
Q ss_pred eeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 215 VSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 215 ~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
+.. .+...++.|+.||+|+|+.
T Consensus 192 ---~~~---~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 192 ---NVE---TGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp ---ETT---TCCEEEEEEEEEEECCCCE
T ss_pred ---cCC---CceEEEEEeCEEEECcCCC
Confidence 121 2345789999999999953
No 162
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.61 E-value=7.9e-08 Score=94.56 Aligned_cols=112 Identities=16% Similarity=0.254 Sum_probs=68.7
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.||+|||||++|+++|+.|++. +|.+|+|||+.+.+|.. ...... ++. + .+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~---~~~~~~----------~~~--~-~~~~~--------- 57 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYL---SGGLSA----------YFN--H-TINEL--------- 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSC---CC-----------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCccc---Cccchh----------hhc--C-CCCCH---------
Confidence 5999999999999999999874 47999999999876521 000000 000 0 00000
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+...+.+.+ ++.|++++.+++|+.+..+++.+. +... .+..++.+|.+|+|||...
T Consensus 58 ~~~~~~~~~~~-~~~gi~~~~~~~V~~id~~~~~v~-v~~~-------------~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 58 HEARYITEEEL-RRQKIQLLLNREVVAMDVENQLIA-WTRK-------------EEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp ---CCCCHHHH-HHTTEEEECSCEEEEEETTTTEEE-EEET-------------TEEEEEECSEEEECCCCCB
T ss_pred HHhhcCCHHHH-HHCCCEEEECCEEEEEECCCCEEE-EEec-------------CceEEEEcCEEEECCCccc
Confidence 00000011222 357899999999999876666543 2211 0236799999999999754
No 163
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.60 E-value=1.5e-07 Score=94.78 Aligned_cols=36 Identities=28% Similarity=0.548 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSP 127 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~ 127 (359)
.+||+||||+|.+|+.+|.+|++ |.+|+|||++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCc
Confidence 35999999999999999999998 7999999998643
No 164
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.60 E-value=1.4e-07 Score=92.28 Aligned_cols=109 Identities=16% Similarity=0.265 Sum_probs=67.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC--eEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIK 168 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 168 (359)
.+||+|||||++|+.+|..|++. |. +|+|||+......... .+... ++. +. .... ... .
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~~~~----~l~~~--------~~~--~~-~~~~-~~~--~ 64 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-GWEGNIRLVGDATVIPHHLP----PLSKA--------YLA--GK-ATAE-SLY--L 64 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCCSCCBCSG----GGGTT--------TTT--TC-SCSG-GGB--S
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-CcCCCEEEEECCCCCCCcCC----CCcHH--------HhC--CC-CChH-Hhc--c
Confidence 48999999999999999999998 87 7999999865421100 00000 000 00 0000 000 0
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
. +.+.+ ++.|++++.+++|+.+..++.. |.+. +..++.+|.||+|||...
T Consensus 65 ~-------~~~~~-~~~gv~~~~~~~v~~i~~~~~~---v~~~--------------~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 65 R-------TPDAY-AAQNIQLLGGTQVTAINRDRQQ---VILS--------------DGRALDYDRLVLATGGRP 114 (431)
T ss_dssp S-------CHHHH-HHTTEEEECSCCEEEEETTTTE---EEET--------------TSCEEECSEEEECCCEEE
T ss_pred c-------CHHHH-HhCCCEEEeCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEEcCCCCc
Confidence 0 01222 3579999999999888655443 3332 135799999999999754
No 165
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.56 E-value=1.6e-07 Score=93.11 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=69.3
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
+||+|||||++|+.+|+.|++. +|.+|+|||+....++... .+ ..++. +...+.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~---~~----------~~~~~--~~~~~~---------- 91 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC---GL----------PYVIS--GAIAST---------- 91 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG---GH----------HHHHT--TSSSCG----------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC---Cc----------chhhc--CCcCCH----------
Confidence 5999999999999999999883 3899999999876542111 00 00110 100000
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..+.....+.+.++.|++++.+++|..+..+++.+. +... . +++..++.+|.||+|||..
T Consensus 92 ~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~-v~~~--------~---~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 92 EKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVY-AEHT--------K---TKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp GGGBSSCHHHHHHTTCCEEESSEEEEEEETTTTEEE-EEET--------T---TCCEEEEECSEEEECCCEE
T ss_pred HHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEE-EEEc--------C---CCceEEEEcCEEEECCCCc
Confidence 000111123333456999999999998866555443 2210 0 0112379999999999954
No 166
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.55 E-value=3.1e-07 Score=93.47 Aligned_cols=37 Identities=35% Similarity=0.639 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.+||+||||+|++|+.+|.+|++.+|.+|+|||++..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 3599999999999999999999933999999999753
No 167
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.55 E-value=1.7e-07 Score=93.24 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=68.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC---CeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEE
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPS---IRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVI 167 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G---~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~ 167 (359)
++||+|||||++|+.+|..|++. | .+|+|||+....+.... + ...++. + .+.......
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~~~~~~--~-----------~~~~~~--~-~~~~~~~~~-- 95 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNISFLGA--G-----------MALWIG--E-QIAGPEGLF-- 95 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCCSBCGG--G-----------HHHHHT--T-SSSCSGGGB--
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCCCcccc--c-----------cchhhc--C-ccCCHHHhh--
Confidence 48999999999999999999997 6 99999999875532100 0 001111 0 000000000
Q ss_pred echHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 168 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 168 ~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.. +.+.+ ++.|++++.+++|..+..+++.+. +... ++..++.+|+||+|||..
T Consensus 96 ~~-------~~~~~-~~~gv~v~~~~~v~~i~~~~~~v~-v~~~-------------g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 96 YS-------DKEEL-ESLGAKVYMESPVQSIDYDAKTVT-ALVD-------------GKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp SC-------CHHHH-HHTTCEEETTCCEEEEETTTTEEE-EEET-------------TEEEEEECSEEEECCCEE
T ss_pred hc-------CHHHH-HhCCCEEEeCCEEEEEECCCCEEE-EEeC-------------CcEEEEECCEEEECCCCC
Confidence 00 01122 246899999999998865555443 2101 012579999999999954
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.54 E-value=1.2e-07 Score=91.07 Aligned_cols=107 Identities=14% Similarity=0.191 Sum_probs=65.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPS--IRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIK 168 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 168 (359)
++||+|||||++|+.+|+.|++. | .+|+|+|+.. | +.+....+.. + +....
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~--g-------~~~~~~~l~~----~-----~~~~~-------- 56 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKL-DGETPLLMITADD--G-------RSYSKPMLST----G-----FSKNK-------- 56 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-CSSSCEEEECSSC--C-------CEECGGGGGG----T-----TTTTC--------
T ss_pred CCcEEEECChHHHHHHHHHHHhh-CCCCCEEEEECCC--C-------CccCcccccH----H-----HhCCC--------
Confidence 48999999999999999999998 7 5689999874 1 1121111100 0 00000
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
....+.......+.++.|++++.+++|..+..++..+ .+. ..++.+|.+|+|||..
T Consensus 57 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v---~~~---------------~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 57 DADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRI---WIG---------------EEEVRYRDLVLAWGAE 112 (384)
T ss_dssp CHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEE---EET---------------TEEEECSEEEECCCEE
T ss_pred CHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEE---EEC---------------CcEEECCEEEEeCCCC
Confidence 0011111112223335789999998888876544433 222 2569999999999964
No 169
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.54 E-value=1.5e-07 Score=90.78 Aligned_cols=108 Identities=15% Similarity=0.173 Sum_probs=69.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
....|+|||||++|+.+|..|... +.+|+|||+.+.++.. +....+++.. ..+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~~y~-------------~~~l~~~l~g-~~~~~~--------- 63 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKYLPYY-------------RPRLNEIIAK-NKSIDD--------- 63 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSCCBC-------------GGGHHHHHHS-CCCGGG---------
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCCCcc-------------cChhhHHHcC-CCCHHH---------
Confidence 347899999999999999999666 9999999998765311 1111112110 011100
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
+.....+.+ ++.|++++++++|+++..++..+ .+. +..++.+|.||+|||+.
T Consensus 64 ---l~~~~~~~~-~~~~i~~~~~~~V~~id~~~~~v---~~~--------------~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 64 ---ILIKKNDWY-EKNNIKVITSEFATSIDPNNKLV---TLK--------------SGEKIKYEKLIIASGSI 115 (385)
T ss_dssp ---TBSSCHHHH-HHTTCEEECSCCEEEEETTTTEE---EET--------------TSCEEECSEEEECCCEE
T ss_pred ---ccCCCHHHH-HHCCCEEEeCCEEEEEECCCCEE---EEC--------------CCCEEECCEEEEecCCC
Confidence 000011222 35699999999999997665543 332 23679999999999964
No 170
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.54 E-value=8.5e-08 Score=96.68 Aligned_cols=60 Identities=27% Similarity=0.324 Sum_probs=43.8
Q ss_pred HHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEE---EcCEEEEcCCCCC
Q 018188 175 STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM---EAKIVVSSCGHDG 243 (359)
Q Consensus 175 ~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i---~A~~VIlAtGg~s 243 (359)
..++..+.++.|+++++++.|++|..+++++.||.+.+ .. ++...++ .+|.||+|+|+++
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~------~~---~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTND------PT---LGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESC------TT---SSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEe------cC---CCceeEEEEEeCCEEEEcCChhc
Confidence 34566666567999999999999999888999998742 00 1122233 8899999999754
No 171
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.53 E-value=6.2e-07 Score=86.79 Aligned_cols=138 Identities=20% Similarity=0.271 Sum_probs=93.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|.+. |.+|+++|+.+.+.... + ..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~~~~~--------------------------~-----------~~ 184 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRVMARV--------------------------V-----------TP 184 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTT--------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcchhhc--------------------------c-----------CH
Confidence 5799999999999999999999 99999999987541100 0 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
.+.+.+.+.+ ++.|++++++++|.++..+++++.+|... ++.++.||.||+|+|.... ..
T Consensus 185 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~v~~V~~~--------------dG~~i~aD~Vv~a~G~~p~-----~~ 244 (404)
T 3fg2_P 185 EISSYFHDRH-SGAGIRMHYGVRATEIAAEGDRVTGVVLS--------------DGNTLPCDLVVVGVGVIPN-----VE 244 (404)
T ss_dssp HHHHHHHHHH-HHTTCEEECSCCEEEEEEETTEEEEEEET--------------TSCEEECSEEEECCCEEEC-----CH
T ss_pred HHHHHHHHHH-HhCCcEEEECCEEEEEEecCCcEEEEEeC--------------CCCEEEcCEEEECcCCccC-----HH
Confidence 2233333333 47899999999999998888888888774 2368999999999995432 23
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEee
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEI 298 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~ 298 (359)
.+...|+... .++.++. . .+.-.|++|..|......
T Consensus 245 l~~~~gl~~~----~Gi~vd~--~-----~~t~~~~iya~GD~a~~~ 280 (404)
T 3fg2_P 245 IAAAAGLPTA----AGIIVDQ--Q-----LLTSDPHISAIGDCALFE 280 (404)
T ss_dssp HHHHTTCCBS----SSEEECT--T-----SBCSSTTEEECGGGEEEE
T ss_pred HHHhCCCCCC----CCEEECC--C-----cccCCCCEEEeecceeec
Confidence 3455555211 1222321 1 112358888888765544
No 172
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=2.1e-07 Score=89.10 Aligned_cols=104 Identities=17% Similarity=0.259 Sum_probs=64.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcC-CcceecCCeEEEec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELG-VEYDEQDNYVVIKH 169 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G-~~~~~~~~~~~~~~ 169 (359)
..||+|||||++|+.+|..|++. | +|+|||+....+- .... ...++. | ..++.. . ..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~~~---------~~~~----l~~~~~--g~~~~~~~--~---~~ 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVPYY---------SKPM----LSHYIA--GFIPRNRL--F---PY 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSCCC---------CSTT----HHHHHT--TSSCGGGG--C---SS
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCCcc---------ccch----hHHHHh--CCCCHHHh--c---cC
Confidence 36999999999999999999999 8 9999999875421 0000 011111 1 111100 0 00
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
. .+.+ ++.|++++.+++|+.+..+...|. . +..++.+|+||+|||..
T Consensus 66 ~-------~~~~-~~~~v~~~~g~~v~~id~~~~~V~---~---------------~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 66 S-------LDWY-RKRGIEIRLAEEAKLIDRGRKVVI---T---------------EKGEVPYDTLVLATGAR 112 (367)
T ss_dssp C-------HHHH-HHHTEEEECSCCEEEEETTTTEEE---E---------------SSCEEECSEEEECCCEE
T ss_pred C-------HHHH-HhCCcEEEECCEEEEEECCCCEEE---E---------------CCcEEECCEEEECCCCC
Confidence 0 1112 246899999988888754433322 1 13579999999999964
No 173
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.53 E-value=5.4e-08 Score=96.06 Aligned_cols=39 Identities=33% Similarity=0.475 Sum_probs=36.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGG 129 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG 129 (359)
..+||+|||||++|+++|+.|++. |.+|+|+|+...+||
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCCCC
Confidence 357999999999999999999999 999999999988876
No 174
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.53 E-value=1.9e-07 Score=94.85 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=70.7
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
..||+|||||++|+++|+.|++. +|.+|+|||+.+.++-.. .. ...+ ++-.+....
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~---~~----------lp~~---~~g~~~~~~------- 92 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFAN---CG----------LPYY---IGGVITERQ------- 92 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCG---GG----------HHHH---HTTSSCCGG-------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccC---CC----------Cchh---hcCcCCChH-------
Confidence 36999999999999999999874 478999999998764110 00 0000 110000000
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..+... .+.+.++.+++++++++|+++..+++.+...... ++...++.+|.||+|||..
T Consensus 93 -~~~~~~-~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~------------~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 93 -KLLVQT-VERMSKRFNLDIRVLSEVVKINKEEKTITIKNVT------------TNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp -GGBSSC-HHHHHHHTTCEEECSEEEEEEETTTTEEEEEETT------------TCCEEEEECSEEEECCCEE
T ss_pred -HhhccC-HHHHHHhcCcEEEECCEEEEEECCCCEEEEeecC------------CCCEEEEeCCEEEECCCCC
Confidence 000111 2333345799999999999997766654321111 1123478999999999964
No 175
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.51 E-value=3e-07 Score=91.83 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
..|||||||++|+.+|..|++. +++|+|||+++.
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 5799999999999999999988 999999999863
No 176
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.49 E-value=4e-07 Score=89.47 Aligned_cols=113 Identities=13% Similarity=0.080 Sum_probs=67.9
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCC-c-ceecCCeEEEe
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGV-E-YDEQDNYVVIK 168 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~-~-~~~~~~~~~~~ 168 (359)
+||+|||||++|+.+|+.|++. +|.+|+|||+...++.... . ...++. +. . ++... .
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~---~----------~~~~~~--g~~~~~~~~~-~---- 60 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC---G----------IALYLG--KEIKNNDPRG-L---- 60 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG---G----------HHHHHT--TCBGGGCGGG-G----
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc---c----------chhhhc--CCcccCCHHH-h----
Confidence 4899999999999999999874 4899999999875532100 0 000110 10 0 00000 0
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
...+.+.+ ++.|++++.+++|..+..+++.+. +... .+++..++++|.+|+|||..
T Consensus 61 -----~~~~~~~~-~~~gv~~~~~~~v~~i~~~~~~v~-v~~~-----------~~g~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 61 -----FYSSPEEL-SNLGANVQMRHQVTNVDPETKTIK-VKDL-----------ITNEEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp -----BSCCHHHH-HHTTCEEEESEEEEEEEGGGTEEE-EEET-----------TTCCEEEEECSEEEECCCEE
T ss_pred -----hhcCHHHH-HHcCCEEEeCCEEEEEEcCCCEEE-EEec-----------CCCceEEEECCEEEEccCCC
Confidence 00011122 256899999998988865555443 2110 01123679999999999954
No 177
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.48 E-value=8.8e-07 Score=85.04 Aligned_cols=105 Identities=18% Similarity=0.202 Sum_probs=64.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCC---cc-----eeeh-h--cchhHHHHHHHcCCccee
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGG---QL-----FSAM-V--VRKPAQRFLDELGVEYDE 160 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g---~~-----~~~~-~--~~~~~~~~l~~~G~~~~~ 160 (359)
+||+|||||++|+.+|+.|++. |.+|+|+|++...+......+ .+ +... . -.....+.++.+|-..-.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~ 80 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVME 80 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhh
Confidence 6999999999999999999999 999999999874433211111 11 1111 0 011123444444432110
Q ss_pred -------cCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeE
Q 018188 161 -------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 198 (359)
Q Consensus 161 -------~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l 198 (359)
........+...|...+.+.+...++++++.+ +|++|
T Consensus 81 ~aD~~~ipAg~al~vDR~~f~~~~~~~le~~pni~l~q~-eV~~l 124 (443)
T 3g5s_A 81 AADLARVPAGGALAVDREEFSGYITERLTGHPLLEVVRE-EVREI 124 (443)
T ss_dssp HHHHSEECCTTEEEECHHHHHHHHHHHHHTCTTEEEECS-CCCSC
T ss_pred hhhhcCCCCCccccCCcHHHHHHHHHHHHcCCCeEEEhh-hhhhh
Confidence 11233345677778888888877888888754 45444
No 178
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.46 E-value=4.4e-07 Score=87.78 Aligned_cols=109 Identities=18% Similarity=0.176 Sum_probs=66.4
Q ss_pred ccEEEECCChHHHHHHHHhhc---CCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEe
Q 018188 92 TDVIVVGAGSAGLSCAYEISK---NPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIK 168 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 168 (359)
.||+|||||++|+++|+.|++ . |.+|+|||+++..+.... ... ..........+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~~~~~~----~~~--------------~~~~~~~~~~~~--- 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFSYFRPA----LPH--------------VAIGVRDVDELK--- 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEEEECCS----SCC--------------CCSSCCCCCCEE---
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCceeccc----hhh--------------cccCCcCHHHHH---
Confidence 379999999999999999999 7 999999999875421100 000 000000001111
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.. +....++.|++++.+ +|+.+..++..+ .+.+ . .+...++.+|.||+|+|...
T Consensus 60 ------~~-~~~~~~~~gv~~~~~-~v~~i~~~~~~V---~~~~------g----~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 60 ------VD-LSEALPEKGIQFQEG-TVEKIDAKSSMV---YYTK------P----DGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp ------EE-HHHHTGGGTCEEEEC-EEEEEETTTTEE---EEEC------T----TSCEEEEECSEEEECCCCEE
T ss_pred ------HH-HHHHHhhCCeEEEEe-eEEEEeCCCCEE---EEcc------C----CcccceeeCCEEEECCCCCc
Confidence 11 122234679999987 888886555543 2221 0 01225699999999999743
No 179
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.45 E-value=1.9e-06 Score=79.96 Aligned_cols=171 Identities=16% Similarity=0.125 Sum_probs=101.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++...+.. ..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~----------------------------------------~~ 184 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRDGFRA----------------------------------------EK 184 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCC----------------------------------------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCcccc----------------------------------------CH
Confidence 5799999999999999999999 999999998764310 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCC-CCCeEEEcCEEEEcCCCCCCCCchHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSC-MDPNVMEAKIVVSSCGHDGPFGATGV 250 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~-g~~~~i~A~~VIlAtGg~s~~~~~g~ 250 (359)
.+.+.+.+.+ ++.|+++++++++.++..+++++.+|...+. .+ ++..++.+|.||+|+|.....
T Consensus 185 ~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~---------~~~g~~~~i~~D~vv~a~G~~p~~----- 249 (320)
T 1trb_A 185 ILIKRLMDKV-ENGNIILHTNRTLEEVTGDQMGVTGVRLRDT---------QNSDNIESLDVAGLFVAIGHSPNT----- 249 (320)
T ss_dssp HHHHHHHHHH-HTSSEEEECSCEEEEEEECSSSEEEEEEECC---------TTCCCCEEEECSEEEECSCEEESC-----
T ss_pred HHHHHHHHhc-ccCCeEEEcCceeEEEEcCCCceEEEEEEec---------cCCCceEEEEcCEEEEEeCCCCCh-----
Confidence 1233444444 4789999999999999877667777766410 01 234689999999999954321
Q ss_pred HHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCCCc
Q 018188 251 KRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPN 330 (359)
Q Consensus 251 ~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~ 330 (359)
..+. .++... . ..+.++ +...+...+.-.|++|..|...... ..........|..++..+.+.|....
T Consensus 250 ~~~~-~~l~~~-~--G~i~vd--~~~~~~~~~t~~~~vya~GD~~~~~------~~~~~~A~~~g~~aa~~i~~~l~~~~ 317 (320)
T 1trb_A 250 AIFE-GQLELE-N--GYIKVQ--SGIHGNATQTSIPGVFAAGDVMDHI------YRQAITSAGTGCMAALDAERYLDGLA 317 (320)
T ss_dssp GGGT-TTSCEE-T--TEECCC--CSSSSCTTBCSSTTEEECGGGGCSS------SCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHhc-cccccc-C--ceEEEC--CCcccccccCCCCCEEEcccccCCc------chhhhhhhccHHHHHHHHHHHHHhcc
Confidence 1111 111000 0 011111 1000000123358899887543211 00111122567888888888886543
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.44 E-value=8.1e-07 Score=87.13 Aligned_cols=98 Identities=27% Similarity=0.384 Sum_probs=71.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
..+|+|||+|++|+.+|..|++. |.+|+|+|+.+.+... .+ .
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------~~-----------~ 190 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDRPLGV--------------------------YL-----------D 190 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTT--------------------------TC-----------C
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCcccccc--------------------------cC-----------C
Confidence 47999999999999999999999 9999999998754210 00 1
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++.+.+.+.+ ++.|++++++++|.++..+ +++..+... ..++.+|.||+|+|...
T Consensus 191 ~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEM-EANNITIATGETVERYEGD-GRVQKVVTD---------------KNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHH-HTTTEEEEESCCEEEEECS-SBCCEEEES---------------SCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHH-HhCCCEEEcCCEEEEEEcc-CcEEEEEEC---------------CCEEECCEEEECcCCCC
Confidence 12234444444 4789999999999998754 444334331 25799999999999543
No 181
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.44 E-value=4.1e-07 Score=88.31 Aligned_cols=104 Identities=16% Similarity=0.216 Sum_probs=66.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC--eEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEe
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIK 168 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 168 (359)
++||+|||||++|+.+|+.|++. |. +|+|+|+...++... .... ..++.... .+. ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~~~---------~~~~---~~~~~~~~--~~~---~~--- 65 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAERPYDR---------PPLS---KDFMAHGD--AEK---IR--- 65 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCSCCBCS---------GGGG---THHHHHCC--GGG---SB---
T ss_pred CCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCCCcccC---------CCCC---HHHhCCCc--hhh---hh---
Confidence 58999999999999999999998 77 599999987542110 0000 01111100 000 00
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.+ ..++.|++++.+++|+.+..++..+ .+. +..++.+|.||+|||..
T Consensus 66 -----~~-----~~~~~~v~~~~~~~v~~i~~~~~~v---~~~--------------~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 66 -----LD-----CKRAPEVEWLLGVTAQSFDPQAHTV---ALS--------------DGRTLPYGTLVLATGAA 112 (408)
T ss_dssp -----CC-----CTTSCSCEEEETCCEEEEETTTTEE---EET--------------TSCEEECSEEEECCCEE
T ss_pred -----HH-----HHHHCCCEEEcCCEEEEEECCCCEE---EEC--------------CCCEEECCEEEECCCCC
Confidence 00 1246799999998898886544432 232 13579999999999964
No 182
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.44 E-value=1.3e-07 Score=95.52 Aligned_cols=114 Identities=16% Similarity=0.082 Sum_probs=69.1
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.||+|||||++|+++|+.|++. ++.+|+|+|+.+.++.... .+ ..+ ++-.+....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~---~l----------~~~---~~~~~~~~~-------- 57 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC---GL----------PYH---ISGEIAQRS-------- 57 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG---GH----------HHH---HTSSSCCGG--------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc---Cc----------hHH---hcCCcCChH--------
Confidence 4899999999999999999874 3789999999987641100 00 000 000000000
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..+.+. .+.+.++.|++++++++|+++..+++.+. +... .+++..++.+|.||+|||..
T Consensus 58 ~~~~~~-~~~~~~~~~i~~~~~~~V~~id~~~~~v~-~~~~-----------~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 58 ALVLQT-PESFKARFNVEVRVKHEVVAIDRAAKLVT-VRRL-----------LDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp GGBCCC-HHHHHHHHCCEEETTEEEEEEETTTTEEE-EEET-----------TTCCEEEEECSEEEECCCEE
T ss_pred HhhccC-HHHHHHhcCcEEEECCEEEEEECCCCEEE-EEec-----------CCCCeEEEECCEEEECCCCC
Confidence 000000 12222346899999999999976666543 2110 01123579999999999964
No 183
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.43 E-value=2.4e-07 Score=96.02 Aligned_cols=41 Identities=34% Similarity=0.546 Sum_probs=37.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
..+||+|||||++|+++|+.|++. |.+|+|+|+...+||..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~GG~~ 430 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDLGGRV 430 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCTHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCEe
Confidence 358999999999999999999999 99999999998887743
No 184
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.42 E-value=2.1e-06 Score=82.44 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=89.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.+++|||+|+.|+.+|..|++. |.+|+++|+.+.+... + ...
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~---------------------------~----------~~~ 187 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCEQVMPG---------------------------L----------LHP 187 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT---------------------------T----------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCcchhhc---------------------------c----------cCH
Confidence 5899999999999999999999 9999999998654210 0 011
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
.+.+.+.+.+ ++.|++++++++|.++..+++.+ .+... +..++.+|.||+|+|..+. ..
T Consensus 188 ~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~-~v~~~--------------~g~~i~~d~vv~a~G~~p~-----~~ 246 (384)
T 2v3a_A 188 AAAKAVQAGL-EGLGVRFHLGPVLASLKKAGEGL-EAHLS--------------DGEVIPCDLVVSAVGLRPR-----TE 246 (384)
T ss_dssp HHHHHHHHHH-HTTTCEEEESCCEEEEEEETTEE-EEEET--------------TSCEEEESEEEECSCEEEC-----CH
T ss_pred HHHHHHHHHH-HHcCCEEEeCCEEEEEEecCCEE-EEEEC--------------CCCEEECCEEEECcCCCcC-----HH
Confidence 2234444444 47899999999999998776643 34432 2367999999999995542 12
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEE
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA 296 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~ 296 (359)
.+...|+... . ++.++. . .+.-.|++|..|....
T Consensus 247 l~~~~g~~~~-~---gi~vd~--~-----~~t~~~~IyA~GD~~~ 280 (384)
T 2v3a_A 247 LAFAAGLAVN-R---GIVVDR--S-----LRTSHANIYALGDCAE 280 (384)
T ss_dssp HHHHTTCCBS-S---SEEECT--T-----CBCSSTTEEECGGGEE
T ss_pred HHHHCCCCCC-C---CEEECC--C-----CCCCCCCEEEeeeeee
Confidence 4555565221 1 233331 1 1223589999987654
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.42 E-value=2.8e-07 Score=89.52 Aligned_cols=106 Identities=15% Similarity=0.233 Sum_probs=66.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCe--EEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIR--VAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~--V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.||+|||||++|+++|..|++. |.+ |+|+|+.+.++... ..+. ..++. -....+ .. ..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~~~~y~~---------~~l~---~~~~~-g~~~~~---~~---~~ 62 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEPHLPYDR---------PSLS---KAVLD-GSLERP---PI---LA 62 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSSSSSBCS---------GGGG---THHHH-TSSSSC---CB---SS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCCCCCcCC---------cccc---HHHhC-CCCCHH---Hh---cC
Confidence 4899999999999999999998 877 99999987653210 0000 00111 000000 00 11
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
. .+.+ ++.+++++.+++|+.+..+...+ .+. +..++.+|.+|+|||..
T Consensus 63 ~-------~~~~-~~~~i~~~~~~~v~~id~~~~~v---~~~--------------~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 63 E-------ADWY-GEARIDMLTGPEVTALDVQTRTI---SLD--------------DGTTLSADAIVIATGSR 110 (410)
T ss_dssp C-------TTHH-HHTTCEEEESCCEEEEETTTTEE---EET--------------TSCEEECSEEEECCCEE
T ss_pred C-------HHHH-HHCCCEEEeCCEEEEEECCCCEE---EEC--------------CCCEEECCEEEEccCCc
Confidence 1 1111 24699999999999886554433 232 23579999999999954
No 186
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.41 E-value=4.4e-07 Score=88.99 Aligned_cols=112 Identities=20% Similarity=0.186 Sum_probs=66.8
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 93 DVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
||||||||++|+.+|..|++. +|.+|+|||+....|... .+ ...++. +...+.. ..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~--~~-----------~~~~~~--~~~~~~~-~~------- 58 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLS--AG-----------MQLYLE--GKVKDVN-SV------- 58 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCG--GG-----------HHHHHT--TSSCCGG-GS-------
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCccc--cc-----------chhhhc--CccCCHH-Hh-------
Confidence 899999999999999999874 479999999987653110 00 000110 1000000 00
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
...+.+.+ ++.|++++.++.|..+..+++.+. +... . ++...++.+|.+|+|||..
T Consensus 59 --~~~~~~~~-~~~gv~~~~~~~v~~i~~~~~~v~-~~~~--------~---~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 59 --RYMTGEKM-ESRGVNVFSNTEITAIQPKEHQVT-VKDL--------V---SGEERVENYDKLIISPGAV 114 (447)
T ss_dssp --BSCCHHHH-HHTTCEEEETEEEEEEETTTTEEE-EEET--------T---TCCEEEEECSEEEECCCEE
T ss_pred --hcCCHHHH-HHCCCEEEECCEEEEEeCCCCEEE-EEec--------C---CCceEEEeCCEEEEcCCCC
Confidence 00011222 246899999999988866555443 2110 0 0122458999999999954
No 187
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.41 E-value=5.5e-07 Score=87.14 Aligned_cols=106 Identities=18% Similarity=0.246 Sum_probs=65.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.||||||||++|+++|+.|++. |. +|+|||+.+....... .+... ++. + .... ..+ ...
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~~y~~~---~l~~~---------~l~--~-~~~~-~~~--~~~ 62 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-KYPGRIALINDEKHLPYQRP---PLSKA---------YLK--S-GGDP-NSL--MFR 62 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSCEEEECCSSSSSBCSG---GGGTG---------GGG--S-CCCT-TSS--BSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-CcCCCEEEEeCCCCCCCCCc---cCCHH---------HHC--C-CCCH-HHc--cCC
Confidence 4899999999999999999998 88 8999999875432110 00000 000 0 0000 000 000
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
. .+.+ .+.+++++. ++|+.+..++..+ .+. +..++.+|.+|+|||..
T Consensus 63 ~-------~~~~-~~~~i~~~~-~~v~~id~~~~~v---~~~--------------~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 63 P-------EKFF-QDQAIELIS-DRMVSIDREGRKL---LLA--------------SGTAIEYGHLVLATGAR 109 (404)
T ss_dssp C-------HHHH-HHTTEEEEC-CCEEEEETTTTEE---EES--------------SSCEEECSEEEECCCEE
T ss_pred C-------HHHH-HhCCCEEEE-EEEEEEECCCCEE---EEC--------------CCCEEECCEEEEeeCCC
Confidence 0 1122 256899998 8898886555432 232 23679999999999963
No 188
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.41 E-value=1.6e-06 Score=85.08 Aligned_cols=98 Identities=14% Similarity=0.160 Sum_probs=72.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++|+.+.+-.. .+ ..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------~~-----------~~ 191 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHERVLYK--------------------------YF-----------DK 191 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSTTTT--------------------------TS-----------CH
T ss_pred CeEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCCchhhh--------------------------hh-----------hh
Confidence 5799999999999999999999 9999999998654110 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+...+.+.+ ++.|++++++++|.++..+++++..+.. +..++.+|.||+|+|...
T Consensus 192 ~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~v~~v~~---------------~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 192 EFTDILAKDY-EAHGVNLVLGSKVAAFEEVDDEIITKTL---------------DGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHH-HHTTCEEEESSCEEEEEEETTEEEEEET---------------TSCEEEESEEEECCCEEE
T ss_pred hHHHHHHHHH-HHCCCEEEcCCeeEEEEcCCCeEEEEEe---------------CCCEEECCEEEECcCCCC
Confidence 2233444444 4679999999999999876676655533 136799999999999543
No 189
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.40 E-value=1.2e-06 Score=85.50 Aligned_cols=138 Identities=14% Similarity=0.172 Sum_probs=90.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++|+.+.+... .+ ..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~~--------------------------~~-----------~~ 191 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAARVLER--------------------------VT-----------AP 191 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTT--------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCccccc--------------------------hh-----------hH
Confidence 5799999999999999999999 9999999998654110 00 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEE--eCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIV--KGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATG 249 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~--~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g 249 (359)
.+...+.+.+ ++.|++++++++|.++.. +++++.+|... ++.++.+|.||+|+|....
T Consensus 192 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~--------------~G~~i~~D~Vv~a~G~~p~----- 251 (431)
T 1q1r_A 192 PVSAFYEHLH-REAGVDIRTGTQVCGFEMSTDQQKVTAVLCE--------------DGTRLPADLVIAGIGLIPN----- 251 (431)
T ss_dssp HHHHHHHHHH-HHHTCEEECSCCEEEEEECTTTCCEEEEEET--------------TSCEEECSEEEECCCEEEC-----
T ss_pred HHHHHHHHHH-HhCCeEEEeCCEEEEEEeccCCCcEEEEEeC--------------CCCEEEcCEEEECCCCCcC-----
Confidence 1223333333 467999999999999986 45667666653 2367999999999995432
Q ss_pred HHHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEee
Q 018188 250 VKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEI 298 (359)
Q Consensus 250 ~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~ 298 (359)
...+...|+... .++.++. . .+.-.|++|..|......
T Consensus 252 ~~l~~~~gl~~~----~gi~Vd~--~-----~~ts~~~IyA~GD~~~~~ 289 (431)
T 1q1r_A 252 CELASAAGLQVD----NGIVINE--H-----MQTSDPLIMAVGDCARFH 289 (431)
T ss_dssp CHHHHHTTCCBS----SSEECCT--T-----SBCSSTTEEECGGGEEEE
T ss_pred cchhhccCCCCC----CCEEECC--C-----cccCCCCEEEEEeEEEEc
Confidence 224455554211 1222321 1 122347888888765543
No 190
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.40 E-value=1.9e-07 Score=91.97 Aligned_cols=41 Identities=32% Similarity=0.371 Sum_probs=38.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
.++||||||+|++||++|+.|+++ |.+|+|+|++..+||.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCccc
Confidence 458999999999999999999999 99999999999999865
No 191
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.38 E-value=3.1e-07 Score=89.60 Aligned_cols=104 Identities=23% Similarity=0.373 Sum_probs=65.3
Q ss_pred ccEEEECCChHHHHHHHHhhc--CCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 92 TDVIVVGAGSAGLSCAYEISK--NPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~--~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.||||||||++|+++|+.|++ . |.+|+|||+.+..+... ...++. .+. +... .....
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~~---------------~~~~~~-~g~-~~~~-~~~~~-- 61 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFTP---------------AFPHLA-MGW-RKFE-DISVP-- 61 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECGG---------------GHHHHH-HTC-SCGG-GSEEE--
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcCC---------------Ccchhc-cCc-cCHH-HHHHH--
Confidence 689999999999999999999 6 89999999987543210 001110 111 0000 01110
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
+....++.|++++.+ +|+.+..++.. |.+. +..++.+|.||+|||..
T Consensus 62 --------~~~~~~~~gv~~~~~-~v~~id~~~~~---v~~~--------------~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 62 --------LAPLLPKFNIEFINE-KAESIDPDANT---VTTQ--------------SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp --------STTTGGGGTEEEECS-CEEEEETTTTE---EEET--------------TCCEEECSEEEECCCCE
T ss_pred --------HHHHHHhcCCEEEEE-EEEEEECCCCE---EEEC--------------CCcEEECCEEEEcCCcc
Confidence 111223568999875 78887654443 2232 23579999999999965
No 192
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.36 E-value=6.2e-07 Score=88.69 Aligned_cols=42 Identities=38% Similarity=0.846 Sum_probs=38.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
..+||+|||||++||+||+.|++. |.+|+|+|+...+||.++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG~~~ 51 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGGRVW 51 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCCcee
Confidence 357999999999999999999999 999999999999998653
No 193
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.36 E-value=5.1e-07 Score=88.32 Aligned_cols=105 Identities=17% Similarity=0.306 Sum_probs=65.7
Q ss_pred ccEEEECCChHHHHHHHHhhc---CCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEe
Q 018188 92 TDVIVVGAGSAGLSCAYEISK---NPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIK 168 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 168 (359)
.||||||||++|+++|+.|++ . |.+|+|||+.+.... . . ...++. .|..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~~~---------~-----~-~~~~~~-~g~~----------- 56 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYFQF---------V-----P-SNPWVG-VGWK----------- 56 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEEEC---------G-----G-GHHHHH-HTSS-----------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCCcc---------c-----C-Cccccc-cCcc-----------
Confidence 589999999999999999998 7 999999999864210 0 0 001110 0100
Q ss_pred chHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 169 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 169 ~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...++...+. ...++.|++++.. +|+.+..++.. |.+. +..++.+|+||+|||...
T Consensus 57 ~~~~~~~~l~-~~~~~~gv~~~~~-~v~~id~~~~~---V~~~--------------~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 57 ERDDIAFPIR-HYVERKGIHFIAQ-SAEQIDAEAQN---ITLA--------------DGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp CHHHHEEECH-HHHHTTTCEEECS-CEEEEETTTTE---EEET--------------TSCEEECSEEEECCCCEE
T ss_pred CHHHHHHHHH-HHHHHCCCEEEEe-EEEEEEcCCCE---EEEC--------------CCCEEECCEEEECCCCCc
Confidence 0011111112 2234679999864 88888655443 2332 235799999999999643
No 194
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.35 E-value=4.8e-07 Score=88.51 Aligned_cols=66 Identities=35% Similarity=0.604 Sum_probs=49.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCccc---CCcceee--hh---cchhHHHHHHHcCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWL---GGQLFSA--MV---VRKPAQRFLDELGVE 157 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~---~g~~~~~--~~---~~~~~~~~l~~~G~~ 157 (359)
++||+|||||++||+||+.|++. |.+|+|+|++..+||.+.. .|..++. .. ......++++++|+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 58999999999999999999999 9999999999999887632 1221110 01 134566788888874
No 195
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.35 E-value=3.6e-07 Score=94.44 Aligned_cols=39 Identities=31% Similarity=0.525 Sum_probs=36.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGG 130 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~ 130 (359)
.+||+|||||++|+.+|+.|++. |.+|+|+|+.+.+||.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCe
Confidence 47999999999999999999999 9999999999888764
No 196
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.34 E-value=3.6e-06 Score=77.69 Aligned_cols=97 Identities=20% Similarity=0.228 Sum_probs=71.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. +.+|+++++.+.+. ++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~-----------------------------~~------------ 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMK-----------------------------AD------------ 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-BSEEEEECSSSSCC-----------------------------SC------------
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCEEEEEEeCcccC-----------------------------cc------------
Confidence 5799999999999999999998 99999999886431 00
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..+.+.+.+..|+++++++++.++..+++++.++...+. .+++..++.+|.||+|+|..
T Consensus 183 ---~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 183 ---QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR---------VSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp ---HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEE
T ss_pred ---HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEEC---------CCCcEEEEEcCEEEEeeCCc
Confidence 122334443379999999999999876667766766420 11233579999999999843
No 197
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.34 E-value=2.8e-06 Score=83.42 Aligned_cols=97 Identities=16% Similarity=0.176 Sum_probs=71.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|++|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~~l~~---------------------------~-----------~~ 208 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDRILPT---------------------------M-----------DL 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT---------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCccccc---------------------------c-----------CH
Confidence 5799999999999999999999 9999999998654100 0 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+.+.+.+.+ ++.|++++++++|+++..+++.+. +... +..++.+|.||+|+|..+
T Consensus 209 ~~~~~l~~~l-~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~--------------~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 209 EVSRAAERVF-KKQGLTIRTGVRVTAVVPEAKGAR-VELE--------------GGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHH-HHHTCEEECSCCEEEEEEETTEEE-EEET--------------TSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEECCEEEEEEEeCCEEE-EEEC--------------CCeEEEcCEEEECcCCCc
Confidence 2233444444 357999999999999987766542 3332 136799999999999654
No 198
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.33 E-value=2.3e-06 Score=84.99 Aligned_cols=97 Identities=22% Similarity=0.339 Sum_probs=70.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+-.. .++ .
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------~~~-----------~ 236 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDTCLAG--------------------------YYD-----------R 236 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTT--------------------------TSC-----------H
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccchhhh--------------------------HHH-----------H
Confidence 5799999999999999999999 9999999998754110 011 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+.+.+ ++.|++++++++|+++.. ++++..+... ..++.+|.||+|+|...
T Consensus 237 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~-~~~v~~v~~~---------------g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 237 DLTDLMAKNM-EEHGIQLAFGETVKEVAG-NGKVEKIITD---------------KNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHHH-HTTTCEEEETCCEEEEEC-SSSCCEEEES---------------SCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHH-HhCCeEEEeCCEEEEEEc-CCcEEEEEEC---------------CcEEECCEEEECCCCCc
Confidence 2233444444 578999999999999875 4444434331 35799999999999543
No 199
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.32 E-value=3.8e-06 Score=82.84 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=72.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.+|+|||||..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~~ 210 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMPEILPQ---------------------------G-----------DP 210 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCCccccc---------------------------c-----------CH
Confidence 5899999999999999999999 9999999998654110 0 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+ ++.|++++++++|+++..+++.+. +.... .. .+...++.+|.||+|+|..+
T Consensus 211 ~~~~~l~~~l-~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~------~~---~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 211 ETAALLRRAL-EKEGIRVRTKTKAVGYEKKKDGLH-VRLEP------AE---GGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHHHHH-HHTTCEEECSEEEEEEEEETTEEE-EEEEE------TT---CCSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HhcCCEEEcCCEEEEEEEeCCEEE-EEEee------cC---CCceeEEEcCEEEECCCccc
Confidence 2233334444 467999999999999987766543 33310 00 01234799999999999554
No 200
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.32 E-value=3.1e-06 Score=78.82 Aligned_cols=164 Identities=13% Similarity=0.076 Sum_probs=101.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
...|+|||+|..|+.+|..|++. |.+|+++++...+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~~~----------------------------------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHLRA----------------------------------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCccCC-----------------------------------------
Confidence 35799999999999999999999 999999998865310
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHH
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 250 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~ 250 (359)
...+.+.+.+..|+++++++++.++..+++++.+|...+. .+++..++.+|.||+|+|.....
T Consensus 211 ---~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~----- 273 (338)
T 3itj_A 211 ---STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNT---------KKNEETDLPVSGLFYAIGHTPAT----- 273 (338)
T ss_dssp ---CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEET---------TTTEEEEEECSEEEECSCEEECC-----
T ss_pred ---CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEEC---------CCCceEEEEeCEEEEEeCCCCCh-----
Confidence 1223444544569999999999999887777777766420 01224679999999999954321
Q ss_pred HHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCC
Q 018188 251 KRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 328 (359)
Q Consensus 251 ~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~ 328 (359)
..+.. ++. +.....+.+. + ...+.-.|++|..|..... .+ ......+..|..++..+.+.+..
T Consensus 274 ~~~~~-~l~--~~~~G~i~v~--~----~~~~t~~~~vya~GD~~~~---~~---~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 274 KIVAG-QVD--TDEAGYIKTV--P----GSSLTSVPGFFAAGDVQDS---KY---RQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp GGGBT-TBC--BCTTSCBCCC--T----TSSBCSSTTEEECGGGGCS---SC---CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHhhC-ceE--ecCCCcEEEc--C----cccccCCCCEEEeeccCCC---Cc---cceeeehhhhHHHHHHHHHHHhc
Confidence 11111 110 0000000000 0 0112245899998764421 00 11112236788888888888754
No 201
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.32 E-value=3.5e-06 Score=82.72 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=72.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..++|||+|..|+.+|..|++. |.+|+++++.+.+... .+ ..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------~~-----------d~ 189 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLENLLPK--------------------------YF-----------DK 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT--------------------------TC-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEccCccccc--------------------------cC-----------CH
Confidence 5799999999999999999999 9999999998754110 01 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+.+.+ ++.|++++++++|.++..+++++ .+... ..++.+|.||+|+|...
T Consensus 190 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~v-~v~~~---------------~g~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 190 EMVAEVQKSL-EKQAVIFHFEETVLGIEETANGI-VLETS---------------EQEISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHH-HTTTEEEEETCCEEEEEECSSCE-EEEES---------------SCEEEESEEEECSCCBC
T ss_pred HHHHHHHHHH-HHcCCEEEeCCEEEEEEccCCeE-EEEEC---------------CCEEEeCEEEECcCCCC
Confidence 2234444444 57899999999999998766666 45442 13799999999999654
No 202
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.32 E-value=5.7e-06 Score=76.37 Aligned_cols=97 Identities=11% Similarity=0.140 Sum_probs=71.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~------------------------------------------ 180 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRDGFRC------------------------------------------ 180 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-SSEEEEECSSSSCCS------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeeCCccCC------------------------------------------
Confidence 5899999999999999999999 999999998764310
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
...+.+.+.++.|+++++++++.++..+++++.++.... . .+++..++.+|.||+|+|..
T Consensus 181 --~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~------~---~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 181 --APITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKN------T---ATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp --CHHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEE------T---TTCCEEEEECSEEEECSCEE
T ss_pred --CHHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEe------c---CCCceEEEecCEEEEEecCc
Confidence 011234444457999999999999987767766665531 0 01223579999999999944
No 203
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.31 E-value=2.9e-07 Score=89.97 Aligned_cols=104 Identities=24% Similarity=0.424 Sum_probs=64.5
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 93 DVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.|||||||++|+.+|..|++. ++.+|+|||+.+... | .+.. .++- .|. ++.. .....
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~---------~-----~p~l-~~v~-~g~-~~~~-~i~~~---- 61 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG---------F-----TPAF-PHLA-MGW-RKFE-DISVP---- 61 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE---------C-----GGGH-HHHH-HTC-SCGG-GSEEE----
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc---------c-----CccH-HHHh-cCC-CCHH-Hhhhc----
Confidence 699999999999999999874 358999999986420 1 0101 1111 111 0000 01100
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
++.+.++.|++++.+ +|++|..++..| .+. ++.++.+|++|+|||..
T Consensus 62 ------~~~~~~~~gv~~i~~-~v~~Id~~~~~V---~~~--------------~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 62 ------LAPLLPKFNIEFINE-KAESIDPDANTV---TTQ--------------SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp ------STTTGGGGTEEEECS-CEEEEETTTTEE---EET--------------TCCEEECSEEEECCCCE
T ss_pred ------HHHHHHHCCcEEEEe-EEEEEECCCCEE---EEC--------------CCCEEECCEEEEeCCCC
Confidence 112223568999877 788886665543 332 24679999999999964
No 204
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.29 E-value=2.8e-06 Score=83.42 Aligned_cols=98 Identities=15% Similarity=0.210 Sum_probs=70.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.. .++ .
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~~-----------~ 208 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFDAPLP---------------------------SFD-----------P 208 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSST---------------------------TSC-----------H
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCCchhh---------------------------hhh-----------H
Confidence 5899999999999999999999 999999999865411 010 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+.+.+.+.+ ++.|++++++++|.++..+++....+... ++.++.+|.||+|+|..+
T Consensus 209 ~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~--------------~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 209 MISETLVEVM-NAEGPQLHTNAIPKAVVKNTDGSLTLELE--------------DGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHH-HHHSCEEECSCCEEEEEECTTSCEEEEET--------------TSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEEEeCCcEEEEEEC--------------CCcEEEcCEEEECCCCCc
Confidence 1233434444 46799999999999998765432234442 135799999999999544
No 205
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.29 E-value=5.5e-07 Score=87.28 Aligned_cols=41 Identities=27% Similarity=0.528 Sum_probs=37.8
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCC-CeEEEEeeccCCCCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPS-IRVAIIEQSVSPGGGA 131 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~vlEk~~~~GG~~ 131 (359)
.++||+|||||++||+||+.|++. | .+|+|+|+...+||.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCCCcc
Confidence 358999999999999999999999 9 8999999999998864
No 206
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.29 E-value=4.3e-06 Score=82.58 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=71.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.. .++ .
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~~-----------~ 224 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQPQIGA---------------------------SMD-----------G 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSS---------------------------SSC-----------H
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcccc---------------------------ccC-----------H
Confidence 5899999999999999999999 999999999875421 010 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEe-CCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+ ++.|++++++++|+++..+ ++....+.... . .+++..++.+|.||+|+|...
T Consensus 225 ~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~------~---~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 225 EVAKATQKFL-KKQGLDFKLSTKVISAKRNDDKNVVEIVVED------T---KTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp HHHHHHHHHH-HHTTCEEECSEEEEEEEEETTTTEEEEEEEE------T---TTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEEEecCCCeEEEEEEE------c---CCCCceEEECCEEEECCCCCc
Confidence 2234444444 4679999999999999862 33333343320 0 011236799999999999543
No 207
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.29 E-value=3.5e-07 Score=91.44 Aligned_cols=41 Identities=34% Similarity=0.529 Sum_probs=38.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCC-CeEEEEeeccCCCCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPS-IRVAIIEQSVSPGGGA 131 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~vlEk~~~~GG~~ 131 (359)
..+||+|||||++||+||+.|++. | .+|+|+|++..+||..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCCCce
Confidence 358999999999999999999999 9 9999999999999865
No 208
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.28 E-value=6.2e-06 Score=76.92 Aligned_cols=98 Identities=16% Similarity=0.244 Sum_probs=72.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~------------------------------------------ 196 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDAFRA------------------------------------------ 196 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSSSCCS------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCCcCCc------------------------------------------
Confidence 5799999999999999999999 999999998864310
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCC--EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~--~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...+.+++.++.|+++++++++.++..+++ ++.++.... . .+++..++.+|.||+|+|...
T Consensus 197 --~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~------~---~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 197 --SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKN------V---VTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp --CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEE------T---TTCCEEEEECSEEEECSCEEE
T ss_pred --cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEe------c---CCCceEEEecCEEEEEeCCcc
Confidence 012233444578999999999999987654 666565531 0 112346799999999999543
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.28 E-value=3.3e-07 Score=90.55 Aligned_cols=38 Identities=34% Similarity=0.531 Sum_probs=34.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeeccCCCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPS--IRVAIIEQSVSPGG 129 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~vlEk~~~~GG 129 (359)
.+||+|||+|++|+.+|..|++. | .+|+|||+.+.+||
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSSCT
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcCCc
Confidence 37999999999999999999998 7 99999999987754
No 210
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.28 E-value=4e-07 Score=98.43 Aligned_cols=39 Identities=28% Similarity=0.510 Sum_probs=35.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCCCCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSPGGG 130 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~GG~ 130 (359)
.+||+|||||++|+++|+.|++. |. +|+|+|+...+||.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~GG~ 226 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYVGGL 226 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSCSTH
T ss_pred CCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCCCcc
Confidence 57999999999999999999999 99 79999999888763
No 211
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.27 E-value=4.4e-06 Score=84.17 Aligned_cols=138 Identities=14% Similarity=0.207 Sum_probs=87.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .+ ..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------~~ 192 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL-GIKTTLLELADQVMT---------------------------PV-----------DR 192 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSCT---------------------------TS-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCCccch---------------------------hc-----------CH
Confidence 4799999999999999999999 999999999865410 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEe-------------------CCEEEEEEEceeeeeccCCCCCCCCCeEEEc
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-------------------GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 232 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~-------------------~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A 232 (359)
.+...+.+.+ ++.|+++++++++.++..+ ++++. +... ++.++.+
T Consensus 193 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~--------------~g~~i~~ 256 (565)
T 3ntd_A 193 EMAGFAHQAI-RDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLS--------------NGELLET 256 (565)
T ss_dssp HHHHHHHHHH-HHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEET--------------TSCEEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEc--------------CCCEEEc
Confidence 2233333333 4689999999999999873 44443 2222 2357999
Q ss_pred CEEEEcCCCCCCCCchHHHHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEee
Q 018188 233 KIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEI 298 (359)
Q Consensus 233 ~~VIlAtGg~s~~~~~g~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~ 298 (359)
|.||+|+|..... ..+...|+.. .....+.++ +. .+.-.|++|..|..+...
T Consensus 257 D~vi~a~G~~p~~-----~l~~~~g~~~--~~~g~i~vd--~~-----~~t~~~~IyA~GD~~~~~ 308 (565)
T 3ntd_A 257 DLLIMAIGVRPET-----QLARDAGLAI--GELGGIKVN--AM-----MQTSDPAIYAVGDAVEEQ 308 (565)
T ss_dssp SEEEECSCEEECC-----HHHHHHTCCB--CTTSSBCCC--TT-----CBCSSTTEEECGGGBCEE
T ss_pred CEEEECcCCccch-----HHHHhCCccc--CCCCCEEEC--CC-----cccCCCCEEEeeeeEeec
Confidence 9999999954321 2344445411 111112222 11 112358999998765443
No 212
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.27 E-value=4.7e-06 Score=80.73 Aligned_cols=133 Identities=17% Similarity=0.209 Sum_probs=86.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++|+.+.+... .+ ..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------~~-----------~~ 187 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPRLMSR--------------------------AA-----------PA 187 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT--------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCccccc--------------------------cc-----------CH
Confidence 5899999999999999999999 9999999998754110 00 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
.+...+.+.+ ++.|++++++++|.++. ++ .|... ++.++.+|.||+|+|.... ..
T Consensus 188 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~--~~---~v~~~--------------~g~~i~~D~vi~a~G~~p~-----~~ 242 (408)
T 2gqw_A 188 TLADFVARYH-AAQGVDLRFERSVTGSV--DG---VVLLD--------------DGTRIAADMVVVGIGVLAN-----DA 242 (408)
T ss_dssp HHHHHHHHHH-HHTTCEEEESCCEEEEE--TT---EEEET--------------TSCEEECSEEEECSCEEEC-----CH
T ss_pred HHHHHHHHHH-HHcCcEEEeCCEEEEEE--CC---EEEEC--------------CCCEEEcCEEEECcCCCcc-----HH
Confidence 2233333444 46799999999999987 44 34442 2367999999999995432 22
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEee
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEI 298 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~ 298 (359)
.+...|+... .++.++. . .+.-.|++|..|......
T Consensus 243 l~~~~gl~~~----~gi~Vd~--~-----~~t~~~~IyA~GD~~~~~ 278 (408)
T 2gqw_A 243 LARAAGLACD----DGIFVDA--Y-----GRTTCPDVYALGDVTRQR 278 (408)
T ss_dssp HHHHHTCCBS----SSEECCT--T-----CBCSSTTEEECGGGEEEE
T ss_pred HHHhCCCCCC----CCEEECC--C-----CccCCCCEEEEEEEEEec
Confidence 3444554211 1233331 1 112348899988766544
No 213
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.27 E-value=1.2e-06 Score=85.02 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=71.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|.+. |.+|+++|+.+.+... . + ..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~~-------------------~-------~-----------~~ 185 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDELLVR-------------------V-------L-----------GR 185 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSHH-------------------H-------H-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCccchh-------------------h-------c-----------CH
Confidence 5899999999999999999999 9999999998654100 0 0 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+.+.+.+.+ ++.|++++++++|.++..++ ++.+|... ++.++.||.||+|+|...
T Consensus 186 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~-~~~~v~~~--------------dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 186 RIGAWLRGLL-TELGVQVELGTGVVGFSGEG-QLEQVMAS--------------DGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHH-HHHTCEEECSCCEEEEECSS-SCCEEEET--------------TSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEeccC-cEEEEEEC--------------CCCEEEcCEEEEeeCCee
Confidence 2233333333 46799999999999987543 45556653 236899999999999543
No 214
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=6.9e-06 Score=80.59 Aligned_cols=101 Identities=16% Similarity=0.243 Sum_probs=72.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
..+|+|||+|+.|+.+|..|++. |.+|+|+|+.+.+.. .+ .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------~ 210 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGEILS---------------------------GF-----------E 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSST---------------------------TS-----------C
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCcccc---------------------------cc-----------C
Confidence 35899999999999999999999 999999999865411 00 1
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++...+.+.+ ++.|++++++++|.++..+++.+. +.... +++..++.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~-----------~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 211 KQMAAIIKKRL-KKKGVEVVTNALAKGAEEREDGVT-VTYEA-----------NGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHHH-HHTTCEEEESEEEEEEEEETTEEE-EEEEE-----------TTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HHCCCEEEeCCEEEEEEEeCCeEE-EEEEe-----------CCceeEEEcCEEEECcCCCc
Confidence 12233444444 467999999999999987766543 32210 01236799999999999543
No 215
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.25 E-value=4.9e-06 Score=82.36 Aligned_cols=97 Identities=22% Similarity=0.317 Sum_probs=71.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
..+|+|||+|+.|+.+|..|++. |.+|+++|+.+.+.. .+ .
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------~ 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERNDHIGT---------------------------IY-----------D 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGGGTTS---------------------------SS-----------C
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCchhh---------------------------cC-----------C
Confidence 36899999999999999999999 999999999865421 00 1
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++.+.+.+.+ ++.|++++++++|+++..+ +++..+... ..++.+|.||+|+|...
T Consensus 227 ~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEA-DKHHIEILTNENVKAFKGN-ERVEAVETD---------------KGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHH-HHTTCEEECSCCEEEEEES-SBEEEEEET---------------TEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHH-HHcCcEEEcCCEEEEEEcC-CcEEEEEEC---------------CCEEEcCEEEECcCCCc
Confidence 12234444444 4679999999999998754 455555442 25799999999999543
No 216
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.25 E-value=5.9e-06 Score=76.07 Aligned_cols=97 Identities=14% Similarity=0.195 Sum_probs=73.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|.+. +.+|+++++...+.. .
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~~~----------------------------------------~- 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEFRA----------------------------------------A- 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSCBS----------------------------------------C-
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCCCC----------------------------------------C-
Confidence 5799999999999999999999 999999998764300 0
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+.+++.++.|+++++++++.++..+++++.++.+.. .+++..++.+|.||+|+|...
T Consensus 186 ---~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~----------~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 186 ---PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKL----------KDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp ---HHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEEC----------TTSCEEEECCSCEEECSCEEE
T ss_pred ---HHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEc----------CCCCeEEeecCeEEEEEcCCC
Confidence 11233444578999999999999988877887776631 112335899999999999543
No 217
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.24 E-value=7.7e-06 Score=80.62 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=70.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.. .++ .
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~~l~---------------------------~~~-----------~ 207 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDRLLF---------------------------QFD-----------P 207 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSST---------------------------TSC-----------H
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcccc---------------------------ccC-----------H
Confidence 4799999999999999999999 999999999865410 010 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCe-EEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN-VMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~-~i~A~~VIlAtGg~s 243 (359)
.+...+.+.+ ++.|++++++++|.++..+++.+ .+... ++. ++.+|.||+|+|...
T Consensus 208 ~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~-~v~~~--------------~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 208 LLSATLAENM-HAQGIETHLEFAVAALERDAQGT-TLVAQ--------------DGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHH-HHTTCEEESSCCEEEEEEETTEE-EEEET--------------TCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEEEeCCeE-EEEEe--------------CCcEEEEcCEEEECCCCCc
Confidence 1223334444 46799999999999998766542 34442 124 799999999999654
No 218
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.23 E-value=5.9e-07 Score=86.95 Aligned_cols=42 Identities=33% Similarity=0.528 Sum_probs=38.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
++||+|||||++|+++|+.|++.+|.+|+|+|+++.+||.+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 589999999999999999999854899999999999998764
No 219
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.23 E-value=9.6e-06 Score=75.48 Aligned_cols=96 Identities=20% Similarity=0.243 Sum_probs=70.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~------------------------------------------ 189 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRDTLRA------------------------------------------ 189 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSCCS------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCCcCCc------------------------------------------
Confidence 5799999999999999999999 999999998764310
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
...+.+++.++.|++++++++++++..+ +++.+|.... . .+++..++.+|.||+|+|..
T Consensus 190 --~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~------~---~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 190 --NKVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRN------L---KTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp --CHHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEE------T---TTCCEEEEECSEEEECSCEE
T ss_pred --chHHHHHHHhcCCceEecCCceEEEccC-CcEEEEEEEE------C---CCCcEEEEEcCEEEEccCCC
Confidence 0122344444579999999999999764 5565665531 0 01223579999999999844
No 220
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.23 E-value=9.8e-06 Score=74.75 Aligned_cols=164 Identities=20% Similarity=0.183 Sum_probs=100.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
...|+|||+|..|+.+|..|.+. |.+|+++++...+..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~~~----------------------------------------- 191 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTFKA----------------------------------------- 191 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCCCc-----------------------------------------
Confidence 35899999999999999999999 999999998865310
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHH
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 250 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~ 250 (359)
...+.+++.++.|+++++++++.++..+ +++.++...+ . .+|+..++.+|.||+|+|.... .
T Consensus 192 ---~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~------~---~~g~~~~~~~D~vv~a~G~~p~-----~ 253 (323)
T 3f8d_A 192 ---QPIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVEN------L---KTGEIKELNVNGVFIEIGFDPP-----T 253 (323)
T ss_dssp ---CHHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEE------T---TTCCEEEEECSEEEECCCEECC-----H
T ss_pred ---CHHHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEE------C---CCCceEEEEcCEEEEEECCCCC-----h
Confidence 0122444555669999999999999765 4555565532 0 0123357999999999995432 2
Q ss_pred HHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhC
Q 018188 251 KRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 327 (359)
Q Consensus 251 ~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~ 327 (359)
..+...|+.. .....+.++ +. .+.-.|++|..|...... .........+..|..++..+.+.+.
T Consensus 254 ~~~~~~g~~~--~~~g~i~vd--~~-----~~t~~~~vya~GD~~~~~----~~~~~~~~A~~~g~~aa~~i~~~l~ 317 (323)
T 3f8d_A 254 DFAKSNGIET--DTNGYIKVD--EW-----MRTSVPGVFAAGDCTSAW----LGFRQVITAVAQGAVAATSAYRYVT 317 (323)
T ss_dssp HHHHHTTCCB--CTTSSBCCC--TT-----CBCSSTTEEECSTTBSTT----TTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhhcCeee--cCCCcEecC--CC-----ceecCCCEEEcceecCCC----CcccceeehhhHHHHHHHHHHHHHH
Confidence 3455554411 111122222 11 112358999987543210 0011111223567777777777664
No 221
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.22 E-value=5.3e-06 Score=81.88 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=71.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... .+ ..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------~~-----------~~ 220 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLGHVGGV--------------------------GI-----------DM 220 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSCS--------------------------SC-----------CH
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccCccCCc--------------------------cc-----------CH
Confidence 5799999999999999999999 9999999998654110 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCE-EEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~-v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+ ++.|++++++++|.++..+++. +. +.... . ..++..++.+|.||+|+|...
T Consensus 221 ~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~~-v~~~~------~---~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 221 EISKNFQRIL-QKQGFKFKLNTKVTGATKKSDGKID-VSIEA------A---SGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp HHHHHHHHHH-HHTTCEEECSEEEEEEEECTTSCEE-EEEEE------T---TSCCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCceEEEEEEcCCceEE-EEEEe------c---CCCCceEEEcCEEEECcCCCc
Confidence 2233334444 4679999999999999876554 32 33210 0 011346899999999999554
No 222
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.21 E-value=7.2e-06 Score=80.32 Aligned_cols=137 Identities=21% Similarity=0.247 Sum_probs=86.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.+|+|||+|..|+.+|..|++. |.+|+++++.+.+... .++ .
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------~~~-----------~ 190 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGERVLRR--------------------------SFD-----------K 190 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTT--------------------------TSC-----------H
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchh--------------------------hcC-----------H
Confidence 5899999999999999999999 9999999998754210 011 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
++...+.+.+ ++. +++++++.+.++..++ ++..+.. +..++.+|.||+|+|.... ..
T Consensus 191 ~~~~~l~~~l-~~~-v~i~~~~~v~~i~~~~-~v~~v~~---------------~g~~i~~D~Vv~a~G~~p~-----~~ 247 (449)
T 3kd9_A 191 EVTDILEEKL-KKH-VNLRLQEITMKIEGEE-RVEKVVT---------------DAGEYKAELVILATGIKPN-----IE 247 (449)
T ss_dssp HHHHHHHHHH-TTT-SEEEESCCEEEEECSS-SCCEEEE---------------TTEEEECSEEEECSCEEEC-----CH
T ss_pred HHHHHHHHHH-HhC-cEEEeCCeEEEEeccC-cEEEEEe---------------CCCEEECCEEEEeeCCccC-----HH
Confidence 2233444444 456 9999999999886543 4433333 2367999999999995432 22
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEee
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEI 298 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~ 298 (359)
.+...|+... ....+.++ +. .+.-.|++|..|..+...
T Consensus 248 l~~~~gl~~~--~~G~i~vd--~~-----~~t~~~~IyA~GD~~~~~ 285 (449)
T 3kd9_A 248 LAKQLGVRIG--ETGAIWTN--EK-----MQTSVENVYAAGDVAETR 285 (449)
T ss_dssp HHHHTTCCBC--TTSSBCCC--TT-----CBCSSTTEEECSTTBCEE
T ss_pred HHHhCCccCC--CCCCEEEC--CC-----CccCCCCEEEeeeeeeec
Confidence 3455554111 11112222 11 122358999988655433
No 223
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.19 E-value=6.3e-06 Score=76.54 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=70.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+..|..|++. |.+|+++++.+.+.. .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~~~~~~----------------------------------------~- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYMPKYMC----------------------------------------E- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSSSSCCS----------------------------------------C-
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcCCccCC----------------------------------------C-
Confidence 5799999999999999999999 999999998754310 0
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
..+.+.+. +.|+++++++++.++..+++++.++.... . .+++..++.+|.||+|+|..
T Consensus 194 ---~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~------~---~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 194 ---NAYVQEIK-KRNIPYIMNAQVTEIVGDGKKVTGVKYKD------R---TTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ---HHHHHHHH-HTTCCEECSEEEEEEEESSSSEEEEEEEE------T---TTCCEEEECCSEEEECCCEE
T ss_pred ---HHHHHHHh-cCCcEEEcCCeEEEEecCCceEEEEEEEE------c---CCCceEEEecCEEEEeeCCc
Confidence 11233333 57999999999999987666566666531 0 01223579999999999854
No 224
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.19 E-value=6.7e-07 Score=89.01 Aligned_cols=39 Identities=23% Similarity=0.453 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCC
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPG 128 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~G 128 (359)
.++||||||||++|+.+|..|.+. ++.+|+|||+.+.++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 358999999999999999887652 378999999987654
No 225
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=6.6e-06 Score=81.87 Aligned_cols=99 Identities=11% Similarity=0.163 Sum_probs=70.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+.. .++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~d----------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL-GIDSYIFARGNRILR---------------------------KFD----------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSSSCT---------------------------TSC-----------
T ss_pred CCeEEEECChHHHHHHHHHHHHc-CCeEEEEecCCccCc---------------------------ccc-----------
Confidence 35899999999999999999999 999999999865411 011
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeE-EEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV-MEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~-i~A~~VIlAtGg~s 243 (359)
.++...+.+.+ ++.|++++++++|.++..+++....+... ++.+ +.+|.||+|+|...
T Consensus 217 ~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~v~~~--------------~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDM-KKNNINIVTFADVVEIKKVSDKNLSIHLS--------------DGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHH-HHTTCEEECSCCEEEEEESSTTCEEEEET--------------TSCEEEEESEEEECCCBCC
T ss_pred hhhHHHHHHHH-HhCCCEEEECCEEEEEEEcCCceEEEEEC--------------CCcEEEECCEEEECCCCCc
Confidence 12233334444 46899999999999997654322234432 1244 99999999999654
No 226
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=7.1e-06 Score=81.18 Aligned_cols=98 Identities=13% Similarity=0.170 Sum_probs=70.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..++|||+|..|+.+|..|++. |.+|+++|+.+.+.. .+ ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------d~ 226 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL-GSETHLVIRGETVLR---------------------------KF-----------DE 226 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCEEEEECSSSSSCT---------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEeCCcccc---------------------------cc-----------CH
Confidence 5799999999999999999999 999999999865410 00 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCE-EEEEEEceeeeeccCCCCCCCCC-eEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDP-NVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~-v~gv~~~~~~~~~~~~~~~~g~~-~~i~A~~VIlAtGg~s 243 (359)
.+.+.+.+.+ ++.|++++++++|.++..+++. +..+... ++ .++.+|.||+|+|...
T Consensus 227 ~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~--------------~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 227 CIQNTITDHY-VKEGINVHKLSKIVKVEKNVETDKLKIHMN--------------DSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHH-HHHTCEEECSCCEEEEEECC-CCCEEEEET--------------TSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HhCCeEEEeCCEEEEEEEcCCCcEEEEEEC--------------CCcEEEEcCEEEECCCCCC
Confidence 2233333444 4679999999999999765432 3344442 13 5799999999999543
No 227
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.18 E-value=6.5e-07 Score=88.32 Aligned_cols=39 Identities=23% Similarity=0.383 Sum_probs=34.3
Q ss_pred cccEEEECCChHHHHHHHHhhc-C-C----CCeEEEEeeccCCCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISK-N-P----SIRVAIIEQSVSPGG 129 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~-~-~----G~~V~vlEk~~~~GG 129 (359)
.+||+|||||++|+.+|..|++ . + |.+|+|||+.+.+||
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 4799999999999999999987 4 2 689999999987765
No 228
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.18 E-value=1.1e-06 Score=84.96 Aligned_cols=42 Identities=33% Similarity=0.514 Sum_probs=38.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
.++||+|||||++|+++|+.|++. |.+|+|+|+++.+||.+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGGGC
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCCCccc
Confidence 358999999999999999999999 999999999999988764
No 229
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.17 E-value=1.8e-05 Score=73.85 Aligned_cols=168 Identities=14% Similarity=0.140 Sum_probs=101.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+.. ..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~v~~~~~~~~----------------------------------------~~ 191 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDT-ARRITLIHRRPQFRA----------------------------------------HE 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCCS----------------------------------------CH
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEcCCccCc----------------------------------------cH
Confidence 5799999999999999999999 999999998864310 00
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
...+.+.+.+ ++.|+++++++++.++.. ++++.++.... . .+++..++.+|.||+|+|.... ..
T Consensus 192 ~~~~~l~~~l-~~~gv~v~~~~~v~~i~~-~~~~~~v~~~~------~---~~g~~~~i~~D~vi~a~G~~p~-----~~ 255 (335)
T 2zbw_A 192 ASVKELMKAH-EEGRLEVLTPYELRRVEG-DERVRWAVVFH------N---QTQEELALEVDAVLILAGYITK-----LG 255 (335)
T ss_dssp HHHHHHHHHH-HTTSSEEETTEEEEEEEE-SSSEEEEEEEE------T---TTCCEEEEECSEEEECCCEEEE-----CG
T ss_pred HHHHHHHhcc-ccCCeEEecCCcceeEcc-CCCeeEEEEEE------C---CCCceEEEecCEEEEeecCCCC-----ch
Confidence 1123333333 478999999999999976 45555555431 0 0122367999999999995432 12
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCCCc
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPN 330 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~ 330 (359)
.+...++... ...+.++ +. .+.-.|++|..|...... +.+. ........|..++..+++.+....
T Consensus 256 ~l~~~~~~~~---~g~i~vd--~~-----~~t~~~~vya~GD~~~~~-~~~~---~~~~A~~~g~~aa~~i~~~l~~~~ 320 (335)
T 2zbw_A 256 PLANWGLALE---KNKIKVD--TT-----MATSIPGVYACGDIVTYP-GKLP---LIVLGFGEAAIAANHAAAYANPAL 320 (335)
T ss_dssp GGGGSCCCEE---TTEEECC--TT-----CBCSSTTEEECSTTEECT-TCCC---CHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred Hhhhcceecc---CCeeeeC--CC-----CCCCCCCEEEeccccccC-cchh---hhhhhHHHHHHHHHHHHHHhhhhh
Confidence 2333343111 1122222 11 122358999998754321 1111 111112467888888888886543
No 230
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.17 E-value=8.5e-06 Score=77.03 Aligned_cols=168 Identities=15% Similarity=0.148 Sum_probs=103.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++...+... .
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~~----------------------------------------~ 202 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKN-AASVTLVHRGHEFQGH----------------------------------------G 202 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCSSC----------------------------------------S
T ss_pred CcEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCCCCCC----------------------------------------H
Confidence 5799999999999999999999 9999999987643110 0
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
.+.+.+.+.. ++.|+++++++++.++..+++++.+|.... .+++..++.+|.||+|+|..... .
T Consensus 203 ~~~~~l~~~~-~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~----------~~g~~~~i~~D~vi~a~G~~p~~-----~ 266 (360)
T 3ab1_A 203 KTAHEVERAR-ANGTIDVYLETEVASIEESNGVLTRVHLRS----------SDGSKWTVEADRLLILIGFKSNL-----G 266 (360)
T ss_dssp HHHHSSHHHH-HHTSEEEESSEEEEEEEEETTEEEEEEEEE----------TTCCEEEEECSEEEECCCBCCSC-----G
T ss_pred HHHHHHHHHh-hcCceEEEcCcCHHHhccCCCceEEEEEEe----------cCCCeEEEeCCEEEECCCCCCCH-----H
Confidence 0122223333 357999999999999988878776666530 01223679999999999954421 1
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCCCc
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPN 330 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~ 330 (359)
.+...++... ...+.++ +. .+.-.|++|..|...... +.++ ........|..+++.++..+....
T Consensus 267 ~l~~~~~~~~---~g~i~vd--~~-----~~t~~~~vya~GD~~~~~-~~~~---~~~~A~~~g~~aa~~i~~~l~~~~ 331 (360)
T 3ab1_A 267 PLARWDLELY---ENALVVD--SH-----MKTSVDGLYAAGDIAYYP-GKLK---IIQTGLSEATMAVRHSLSYIKPGE 331 (360)
T ss_dssp GGGGSSCCEE---TTEEECC--TT-----SBCSSTTEEECSTTEECT-TCCC---SHHHHHHHHHHHHHHHHHHHSCC-
T ss_pred HHHhhccccc---cCeeeec--CC-----CcCCCCCEEEecCccCCC-Cccc---eeehhHHHHHHHHHHHHhhcCCcc
Confidence 2333333111 1112222 11 112358999998755422 1111 111112457788888888876543
No 231
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.16 E-value=2e-06 Score=82.78 Aligned_cols=103 Identities=22% Similarity=0.217 Sum_probs=62.1
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 93 DVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.|||||||++|+.+|..|++. ++.+|+|||+++..... ......+. |. .+.. .... .
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~--------------p~~~~v~~--g~-~~~~-~~~~--~-- 61 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC--------------YMSNEVIG--GD-RELA-SLRV--G-- 61 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS--------------TTHHHHHH--TS-SCGG-GGEE--C--
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc--------------cCHHHHhc--CC-CCHH-HHhh--C--
Confidence 699999999999999999874 25799999998642100 00000110 11 0000 0000 0
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
++.+. ..|++++.+ +|+.|..++..+ .+. +..++.+|++|+|+|..
T Consensus 62 ------~~~~~-~~gv~~i~~-~v~~id~~~~~v---~~~--------------~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 62 ------YDGLR-AHGIQVVHD-SALGIDPDKKLV---KTA--------------GGAEFAYDRCVVAPGID 107 (401)
T ss_dssp ------SHHHH-HTTCEEECS-CEEEEETTTTEE---EET--------------TSCEEECSEEEECCCEE
T ss_pred ------HHHHH-HCCCEEEEe-EEEEEEccCcEE---Eec--------------ccceeecceeeeccCCc
Confidence 12222 468999877 688776555543 232 24689999999999953
No 232
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.16 E-value=9.7e-06 Score=79.82 Aligned_cols=95 Identities=11% Similarity=0.178 Sum_probs=71.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++|+.+.+- . + ..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l--------------------------~--~-----------~~ 216 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL-GSKVTVLARNTLFF--------------------------R--E-----------DP 216 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTT--------------------------T--S-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCccC--------------------------C--C-----------CH
Confidence 5899999999999999999999 99999999986531 0 0 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+...+.+.+ ++.|++++++++|.++..+++.+ .+... ..++.+|.||+|+|...
T Consensus 217 ~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~---------------~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 217 AIGEAVTAAF-RAEGIEVLEHTQASQVAHMDGEF-VLTTT---------------HGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHH-HHTTCEEETTCCEEEEEEETTEE-EEEET---------------TEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HhCCCEEEcCCEEEEEEEeCCEE-EEEEC---------------CcEEEcCEEEECCCCCc
Confidence 2234444444 46799999999999998766543 34332 25799999999999654
No 233
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.15 E-value=9.7e-06 Score=79.74 Aligned_cols=100 Identities=21% Similarity=0.308 Sum_probs=70.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.. .++ .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~~-----------~ 212 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLPRALP---------------------------NED-----------A 212 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSST---------------------------TSC-----------H
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCCcccc---------------------------ccC-----------H
Confidence 5899999999999999999999 999999999865411 010 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+ ++.|++++++++|.++..+++.+. +... . +++..++.+|.||+|+|...
T Consensus 213 ~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~~-v~~~-------~----~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 213 DVSKEIEKQF-KKLGVTILTATKVESIADGGSQVT-VTVT-------K----DGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHHH-HHHTCEEECSCEEEEEEECSSCEE-EEEE-------S----SSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HHcCCEEEeCcEEEEEEEcCCeEE-EEEE-------c----CCceEEEEcCEEEECCCCCc
Confidence 1223333333 467999999999999987655432 3221 0 11236799999999999544
No 234
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.15 E-value=1.5e-06 Score=83.40 Aligned_cols=42 Identities=29% Similarity=0.449 Sum_probs=38.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeec-cCCCCCcc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQS-VSPGGGAW 132 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~-~~~GG~~~ 132 (359)
..+||+|||||++||++|+.|.+. |.+|+|+|+. ..+||.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRVGGRIK 85 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCCBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccccCCcee
Confidence 358999999999999999999999 9999999999 88988654
No 235
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.15 E-value=7.6e-06 Score=81.02 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=70.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||||..|+.+|..|++. |.+|+|+|+.+.+.. .+ ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~~l~---------------------------~~-----------~~ 226 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDGLMQ---------------------------GA-----------DR 226 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSSSST---------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCcccc---------------------------cc-----------CH
Confidence 5899999999999999999999 999999999875411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+ ++.|++++++++|.++..+++.+ .+...+ .+ +...++.+|.||+|+|...
T Consensus 227 ~~~~~l~~~l-~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~------~~----~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 227 DLVKVWQKQN-EYRFDNIMVNTKTVAVEPKEDGV-YVTFEG------AN----APKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHHHHHH-GGGEEEEECSCEEEEEEEETTEE-EEEEES------SS----CCSSCEEESCEEECCCEEE
T ss_pred HHHHHHHHHH-HhcCCEEEECCEEEEEEEcCCeE-EEEEec------cC----CCceEEEcCEEEECcCCCc
Confidence 2233333333 57899999999999998766543 233321 00 0134688999999999543
No 236
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.13 E-value=1.4e-06 Score=83.45 Aligned_cols=40 Identities=40% Similarity=0.638 Sum_probs=37.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
+||+|||||++|+++|+.|+++ |.+|+|+|++..+||.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCCcceE
Confidence 7999999999999999999999 999999999999988763
No 237
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.12 E-value=1.2e-05 Score=79.95 Aligned_cols=97 Identities=20% Similarity=0.215 Sum_probs=71.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..++|||+|..|+.+|..|++. |.+|+++|+.+.+.. .+ ..
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------d~ 223 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQDHVLP---------------------------YE-----------DA 223 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSSSSSC---------------------------CS-----------SH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCcccc---------------------------cc-----------CH
Confidence 5799999999999999999999 999999999865411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+...+.+.+ ++.|++++++++|+++..+++++. +... +..++.+|.||+|+|...
T Consensus 224 ~~~~~l~~~l-~~~GV~i~~~~~V~~i~~~~~~v~-v~~~--------------~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 DAALVLEESF-AERGVRLFKNARAASVTRTGAGVL-VTMT--------------DGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHH-HHTTCEEETTCCEEEEEECSSSEE-EEET--------------TSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEEEeCCEEE-EEEC--------------CCcEEEcCEEEECCCCCc
Confidence 2234444444 467999999999999987665442 3332 236799999999999554
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.11 E-value=2.3e-05 Score=77.69 Aligned_cols=102 Identities=16% Similarity=0.216 Sum_probs=73.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++|+.+.+.. .+ ..
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------d~ 239 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL-GAKVTVVEFLDTILG---------------------------GM-----------DG 239 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSSS---------------------------SS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEeccccccc---------------------------cC-----------CH
Confidence 5799999999999999999999 999999999875411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+.+.+ ++.|++++++++|.++..+++.+. +...+ .+ .++..++.+|.||+|+|...
T Consensus 240 ~~~~~l~~~l-~~~gV~v~~~~~v~~i~~~~~~~~-v~~~~------~~---~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 240 EVAKQLQRML-TKQGIDFKLGAKVTGAVKSGDGAK-VTFEP------VK---GGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp HHHHHHHHHH-HHTTCEEECSEEEEEEEEETTEEE-EEEEE------TT---SCCCEEEEESEEEECCCCEE
T ss_pred HHHHHHHHHH-HhCCCEEEECCeEEEEEEeCCEEE-EEEEe------cC---CCceEEEEcCEEEEeeCCcc
Confidence 2233444444 467999999999999988776554 33321 00 12346899999999999544
No 239
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.10 E-value=2e-05 Score=78.34 Aligned_cols=98 Identities=17% Similarity=0.284 Sum_probs=69.5
Q ss_pred ccEEEECCChHHHHHHHHhhc----CCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEE
Q 018188 92 TDVIVVGAGSAGLSCAYEISK----NPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVI 167 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~----~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~ 167 (359)
..|+|||||..|+.+|..|++ . |.+|+++++...+.+. . +
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~-g~~V~~v~~~~~~~~~------~--------------------l--------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARAL-GTEVIQLFPEKGNMGK------I--------------------L--------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHH-TCEEEEECSSSSTTTT------T--------------------S---------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhc-CCEEEEEecCcccccc------c--------------------C---------
Confidence 579999999999999999876 4 7899999987532110 0 0
Q ss_pred echHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 168 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 168 ~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...+...+.+.+ ++.|++++++++|.++..+++.+ .|... ++.++.||.||+|+|...
T Consensus 225 --~~~~~~~~~~~l-~~~GV~v~~~~~V~~i~~~~~~~-~v~l~--------------dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 225 --PEYLSNWTMEKV-RREGVKVMPNAIVQSVGVSSGKL-LIKLK--------------DGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp --CHHHHHHHHHHH-HTTTCEEECSCCEEEEEEETTEE-EEEET--------------TSCEEEESEEEECCCEEE
T ss_pred --CHHHHHHHHHHH-HhcCCEEEeCCEEEEEEecCCeE-EEEEC--------------CCCEEECCEEEECCCCCc
Confidence 011223333333 57899999999999998766654 35443 236799999999999554
No 240
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.09 E-value=2.2e-06 Score=85.13 Aligned_cols=43 Identities=23% Similarity=0.451 Sum_probs=38.6
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCC-CeEEEEeeccCCCCCcc
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPS-IRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~vlEk~~~~GG~~~ 132 (359)
+..+||+|||||++||++|+.|++. | .+|+|+|+.+.+||...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSSGGGC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCCCeee
Confidence 3468999999999999999999999 7 79999999999887653
No 241
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.09 E-value=2.7e-05 Score=77.31 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=71.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+.. .+ ..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------d~ 215 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSGSVAN---------------------------LQ-----------DE 215 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTTCCTT---------------------------CC-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCcccc---------------------------cC-----------CH
Confidence 5799999999999999999999 999999999876421 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+.+.+ ++. ++++++++|.++..+++.+. +.... .+|+..++.+|.||+|+|...
T Consensus 216 ~~~~~l~~~l-~~~-V~i~~~~~v~~i~~~~~~v~-v~~~~----------~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 216 EMKRYAEKTF-NEE-FYFDAKARVISTIEKEDAVE-VIYFD----------KSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHH-HTT-SEEETTCEEEEEEECSSSEE-EEEEC----------TTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHH-hhC-cEEEECCEEEEEEEcCCEEE-EEEEe----------CCCceEEEECCEEEEeeCCcc
Confidence 2234444444 355 99999999999987766554 33210 012236799999999999543
No 242
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.09 E-value=1.2e-05 Score=79.26 Aligned_cols=141 Identities=18% Similarity=0.237 Sum_probs=89.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.+|+|||+|..|+.+|..|++..|.+|+++|+.+.+... .+ ..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~--------------------------~~-----------~~ 202 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG--------------------------FT-----------SK 202 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT--------------------------TS-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc--------------------------cc-----------CH
Confidence 589999999999999999887437899999998653110 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
.+...+.+.+ ++.|++++++++|.++..+++++. +... ++.++.+|.||+|+|.... ..
T Consensus 203 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~v~-v~~~--------------~g~~i~aD~Vv~a~G~~p~-----~~ 261 (472)
T 3iwa_A 203 SLSQMLRHDL-EKNDVVVHTGEKVVRLEGENGKVA-RVIT--------------DKRTLDADLVILAAGVSPN-----TQ 261 (472)
T ss_dssp HHHHHHHHHH-HHTTCEEECSCCEEEEEESSSBEE-EEEE--------------SSCEEECSEEEECSCEEEC-----CH
T ss_pred HHHHHHHHHH-HhcCCEEEeCCEEEEEEccCCeEE-EEEe--------------CCCEEEcCEEEECCCCCcC-----HH
Confidence 2234444444 468999999999999987666665 4332 2357999999999995432 12
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeec
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEID 299 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~ 299 (359)
.+...|+... ....+.++ +. .+.-.|++|..|+.+....
T Consensus 262 l~~~~gl~~~--~~g~i~vd--~~-----~~t~~~~Iya~GD~~~~~~ 300 (472)
T 3iwa_A 262 LARDAGLELD--PRGAIIVD--TR-----MRTSDPDIFAGGDCVTIPN 300 (472)
T ss_dssp HHHHHTCCBC--TTCCEECC--TT-----CBCSSTTEEECGGGEEEEB
T ss_pred HHHhCCccCC--CCCCEEEC--CC-----cccCCCCEEEeccceeccc
Confidence 3344444111 01112222 11 1123589999987765543
No 243
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.09 E-value=1.7e-05 Score=80.40 Aligned_cols=136 Identities=15% Similarity=0.202 Sum_probs=87.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .+ ..
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------~~ 228 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRER-GIEVTLVEMANQVMP---------------------------PI-----------DY 228 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT---------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCcccc---------------------------cC-----------CH
Confidence 5799999999999999999999 999999998865411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
.+...+.+.+ ++.|++++++++|.++..+++. |... +..++.+|.||+|+|.... ..
T Consensus 229 ~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~---v~~~--------------~g~~i~~D~Vi~a~G~~p~-----~~ 285 (588)
T 3ics_A 229 EMAAYVHEHM-KNHDVELVFEDGVDALEENGAV---VRLK--------------SGSVIQTDMLILAIGVQPE-----SS 285 (588)
T ss_dssp HHHHHHHHHH-HHTTCEEECSCCEEEEEGGGTE---EEET--------------TSCEEECSEEEECSCEEEC-----CH
T ss_pred HHHHHHHHHH-HHcCCEEEECCeEEEEecCCCE---EEEC--------------CCCEEEcCEEEEccCCCCC-----hH
Confidence 2234444444 4689999999999998654443 3332 2367999999999995432 12
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEee
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEI 298 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~ 298 (359)
.+...|+... ....+.++ +. .+.-.|++|..|+.+...
T Consensus 286 ~l~~~g~~~~--~~g~i~vd--~~-----~~t~~~~IyA~GD~~~~~ 323 (588)
T 3ics_A 286 LAKGAGLALG--VRGTIKVN--EK-----FQTSDPHIYAIGDAIEVK 323 (588)
T ss_dssp HHHHTTCCBC--GGGCBCCC--TT-----SBCSSTTEEECGGGBCEE
T ss_pred HHHhcCceEc--CCCCEEEC--Cc-----cccCCCCEEEeeeeeecc
Confidence 3455554211 11112222 11 122358999998765443
No 244
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.08 E-value=2.5e-06 Score=84.60 Aligned_cols=40 Identities=33% Similarity=0.610 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
.+||+|||||++||++|+.|+++ |.+|+|+|+...+||..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSCSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCCCce
Confidence 47999999999999999999999 99999999999998864
No 245
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.08 E-value=1.7e-05 Score=79.71 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=71.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
-.++|||||..|+..|..+++. |.+|+|+++...+.+ ++ .
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~~L~~----------------------------~D-----------~ 263 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSL-GYDVTVAVRSIVLRG----------------------------FD-----------Q 263 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TCCEEEEESSCSSTT----------------------------SC-----------H
T ss_pred ceEEEECCCHHHHHHHHHHHhc-CCeEEEecccccccc----------------------------cc-----------h
Confidence 4799999999999999999999 999999987543210 11 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+ ++.|+++++++.+..+...++.+. |... +..++.+|.|++|+|...
T Consensus 264 ei~~~l~~~l-~~~gi~~~~~~~v~~~~~~~~~~~-v~~~--------------~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 264 QCAVKVKLYM-EEQGVMFKNGILPKKLTKMDDKIL-VEFS--------------DKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHH-HHTTCEEEETCCEEEEEEETTEEE-EEET--------------TSCEEEESEEEECSCEEE
T ss_pred hHHHHHHHHH-HhhcceeecceEEEEEEecCCeEE-EEEc--------------CCCeEEEEEEEEcccccC
Confidence 2234444444 578999999999999988887654 3332 246788999999999543
No 246
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.07 E-value=1.9e-05 Score=79.05 Aligned_cols=98 Identities=12% Similarity=0.210 Sum_probs=71.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++|+.+.+.. .+ ..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~---------------------------~~-----------~~ 255 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEPLKL---------------------------IK-----------DN 255 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTTT---------------------------CC-----------SH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCcccc---------------------------cc-----------cH
Confidence 5899999999999999999999 999999999865411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEE--EEEceeeeeccCCCCCCCCCe-EEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGG--VVTNWALVSMNHDTQSCMDPN-VMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~g--v~~~~~~~~~~~~~~~~g~~~-~i~A~~VIlAtGg~s 243 (359)
++...+.+.+ ++.|++++++++|+++..++ +++.+ |... ++. ++.||.||+|+|...
T Consensus 256 ~~~~~l~~~l-~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~--------------~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 256 ETRAYVLDRM-KEQGMEIISGSNVTRIEEDANGRVQAVVAMTP--------------NGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHH-HHTTCEEESSCEEEEEEECTTSBEEEEEEEET--------------TEEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHH-HhCCcEEEECCEEEEEEEcCCCceEEEEEEEC--------------CCcEEEEcCEEEECcCCcc
Confidence 2234444444 46799999999999998753 44432 3332 123 799999999999654
No 247
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.07 E-value=2e-05 Score=77.54 Aligned_cols=102 Identities=14% Similarity=0.191 Sum_probs=70.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++|+.+.+.. .+ ..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------d~ 215 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAPRCAP---------------------------TL-----------DE 215 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSST---------------------------TS-----------CH
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCCcccc---------------------------cC-----------CH
Confidence 5899999999999999999999 999999999865411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++...+.+.+.++.|++++++++|.++..+++.+. +.... .+++..++.+|.||+|+|...
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~----------~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVS-LEVEG----------KNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEE-EEEEC----------C---EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEE-EEEEc----------CCCceEEEECCEEEECCCccc
Confidence 22334444441467999999999999987655432 33210 011235799999999999554
No 248
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.07 E-value=2.3e-05 Score=77.30 Aligned_cols=99 Identities=15% Similarity=0.091 Sum_probs=71.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .+ ..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------~~ 221 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMDKFLP---------------------------AV-----------DE 221 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSST---------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCcCc---------------------------cc-----------CH
Confidence 5799999999999999999999 999999999865411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
++.+.+.+.+ ++.|++++++++|.++..+++.+. +...+ . ++ ..++.+|.||+|+|..
T Consensus 222 ~~~~~l~~~l-~~~Gv~v~~~~~v~~i~~~~~~~~-v~~~~------~----~g-~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 222 QVAKEAQKIL-TKQGLKILLGARVTGTEVKNKQVT-VKFVD------A----EG-EKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHH-HHTTEEEEETCEEEEEEECSSCEE-EEEES------S----SE-EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHH-HhCCCEEEECCEEEEEEEcCCEEE-EEEEe------C----CC-cEEEECCEEEEeeCCc
Confidence 2233434444 468999999999999987766554 33321 0 01 2579999999999944
No 249
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=9.8e-06 Score=79.76 Aligned_cols=102 Identities=18% Similarity=0.223 Sum_probs=71.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.. .+ ..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~---------------------------~~-----------~~ 218 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFASEIVP---------------------------TM-----------DA 218 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSSSSST---------------------------TS-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCcccc---------------------------cc-----------cH
Confidence 5899999999999999999999 999999999865411 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+.+.+ ++.|++++++++|.++..+++.+. +.... . .+++..++.+|.||+|+|...
T Consensus 219 ~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~------~---~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 219 EIRKQFQRSL-EKQGMKFKLKTKVVGVDTSGDGVK-LTVEP------S---AGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHHHHHHHH-HHSSCCEECSEEEEEEECSSSSEE-EEEEE------S---SSCCCEEEEESEEECCCCEEE
T ss_pred HHHHHHHHHH-HHcCCEEEeCCEEEEEEEcCCeEE-EEEEe------c---CCCcceEEECCEEEECCCCCc
Confidence 2233344444 467999999999999976554432 33210 0 012346799999999999543
No 250
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.06 E-value=1.8e-05 Score=79.16 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=72.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~-g~~Vtlv~~~~~l~~------------------------------------------ 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMKA------------------------------------------ 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-BSEEEEECSSSSCCS------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCcccCc------------------------------------------
Confidence 5799999999999999999998 999999998765310
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
...+.+.+.+..|+++++++.++++..+++++.++...+. .+++..++.+|.||+|+|..
T Consensus 393 --~~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 393 --DQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR---------VSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp --CHHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEET---------TTCCEEEEECSEEEECCCEE
T ss_pred --CHHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeC---------CCCceEEEEcCEEEECcCCC
Confidence 0122333433369999999999999876677777766420 11234579999999999944
No 251
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.06 E-value=3.1e-06 Score=81.46 Aligned_cols=41 Identities=27% Similarity=0.534 Sum_probs=37.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAW 132 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~ 132 (359)
++||+|||||++|+++|+.|++. |.+|+|+|++..+||.+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcCCccc
Confidence 37999999999999999999999 999999999999987653
No 252
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.06 E-value=5.5e-06 Score=79.77 Aligned_cols=84 Identities=17% Similarity=0.243 Sum_probs=62.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... .++ .
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~~--------------------------~~~-----------~ 188 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS-GTPASIGIILEYPLER--------------------------QLD-----------R 188 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTT--------------------------TSC-----------H
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchh--------------------------hcC-----------H
Confidence 4799999999999999999999 9999999998764210 011 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.+...+ .+..++.|+++++++.+.++ . .++.+|.||+|+|..
T Consensus 189 ~~~~~~-~~~l~~~gV~~~~~~~v~~i------------g----------------~~~~~D~vv~a~G~~ 230 (385)
T 3klj_A 189 DGGLFL-KDKLDRLGIKIYTNSNFEEM------------G----------------DLIRSSCVITAVGVK 230 (385)
T ss_dssp HHHHHH-HHHHHTTTCEEECSCCGGGC------------H----------------HHHHHSEEEECCCEE
T ss_pred HHHHHH-HHHHHhCCCEEEeCCEEEEc------------C----------------eEEecCeEEECcCcc
Confidence 122333 33345789999999988877 1 347799999999944
No 253
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=6.8e-06 Score=78.52 Aligned_cols=129 Identities=20% Similarity=0.280 Sum_probs=84.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.+|+|||+|+.|+.+|..|++. |.+|+++|+.+.+.. ++ .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~----------------------------~~-----------~ 183 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAMFLG----------------------------LD-----------E 183 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSCCTT----------------------------CC-----------H
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCeecc----------------------------CC-----------H
Confidence 4799999999999999999999 999999999875411 10 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
++.+.+.+.+ ++.|++++++++|.++. .+ ++... ++. +.+|.||+|+|.... ..
T Consensus 184 ~~~~~l~~~l-~~~gV~i~~~~~v~~i~--~~---~v~~~--------------~g~-i~~D~vi~a~G~~p~-----~~ 237 (367)
T 1xhc_A 184 ELSNMIKDML-EETGVKFFLNSELLEAN--EE---GVLTN--------------SGF-IEGKVKICAIGIVPN-----VD 237 (367)
T ss_dssp HHHHHHHHHH-HHTTEEEECSCCEEEEC--SS---EEEET--------------TEE-EECSCEEEECCEEEC-----CH
T ss_pred HHHHHHHHHH-HHCCCEEEcCCEEEEEE--ee---EEEEC--------------CCE-EEcCEEEECcCCCcC-----HH
Confidence 2233333444 46799999999999885 23 23342 124 999999999995432 12
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEe
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAE 297 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~ 297 (359)
.+...|+... .++.++ +. .+.-.|++|..|+....
T Consensus 238 ll~~~gl~~~----~gi~Vd--~~-----~~t~~~~IyA~GD~a~~ 272 (367)
T 1xhc_A 238 LARRSGIHTG----RGILID--DN-----FRTSAKDVYAIGDCAEY 272 (367)
T ss_dssp HHHHTTCCBS----SSEECC--TT-----SBCSSTTEEECGGGEEB
T ss_pred HHHhCCCCCC----CCEEEC--CC-----cccCCCCEEEeEeeeec
Confidence 4555555221 123333 11 11235899999876543
No 254
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.04 E-value=1.3e-05 Score=75.05 Aligned_cols=98 Identities=12% Similarity=0.203 Sum_probs=69.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
...|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~~~~~----------------------------------------~ 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRDEFRA----------------------------------------S 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSSSCSS----------------------------------------C
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCCcCCc----------------------------------------c
Confidence 35899999999999999999999 999999998764310 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+.+.+++.++.|+++++++++.++..++ ++.++..... .+++..++.+|.||+|+|...
T Consensus 194 ----~~~~~~~~~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 194 ----KIMLDRARNNDKIRFLTNHTVVAVDGDT-TVTGLRVRDT---------NTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp ----TTHHHHHHHCTTEEEECSEEEEEEECSS-SCCEEEEEEE---------TTSCCEEECCSCEEECSCEEE
T ss_pred ----HHHHHHHhccCCcEEEeCceeEEEecCC-cEeEEEEEEc---------CCCceEEeecCEEEEccCCcc
Confidence 0112233347899999999999987544 3334444210 012346899999999999543
No 255
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=9.5e-06 Score=79.82 Aligned_cols=97 Identities=20% Similarity=0.217 Sum_probs=68.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.+|+|||||.+|+.+|..|++. |.+|+|+|+.+.+.. .+ ..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------~~ 212 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARERILP---------------------------TY-----------DS 212 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSST---------------------------TS-----------CH
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCcccc---------------------------cc-----------CH
Confidence 5899999999999999999999 999999999875421 00 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+...+.+.+ ++.|++++++++|+++.. +.+. +... +|+..++.+|.||+|+|...
T Consensus 213 ~~~~~l~~~l-~~~gv~i~~~~~v~~i~~--~~v~-v~~~------------~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 213 ELTAPVAESL-KKLGIALHLGHSVEGYEN--GCLL-ANDG------------KGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHH-HHHTCEEETTCEEEEEET--TEEE-EECS------------SSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEECCEEEEEEe--CCEE-EEEC------------CCceEEEECCEEEECcCCCc
Confidence 1223333334 467999999999999864 3322 2210 11236799999999999544
No 256
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.02 E-value=4.3e-06 Score=81.75 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=37.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
++||+|||+|++|+++|+.|++. |.+|+|+|++..+||.+
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGGES 45 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCccccc
Confidence 58999999999999999999999 99999999999998864
No 257
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.02 E-value=2.3e-05 Score=77.83 Aligned_cols=99 Identities=10% Similarity=0.083 Sum_probs=70.4
Q ss_pred ccEEEECCChHHHHHHHHhhcC--CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN--PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~--~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
..++|||+|..|+.+|..|++. +|.+|+++|+.+.+.. .+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------~~----------- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR---------------------------GF----------- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST---------------------------TS-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc---------------------------cc-----------
Confidence 5899999999999999998764 2799999999875411 00
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..++...+.+.+ ++.|++++++++|.++..+++....|... ++.++.+|.||+|+|...
T Consensus 230 d~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~~~~v~~~--------------~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 230 DSELRKQLTEQL-RANGINVRTHENPAKVTKNADGTRHVVFE--------------SGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp CHHHHHHHHHHH-HHTTEEEEETCCEEEEEECTTSCEEEEET--------------TSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHH-HhCCCEEEeCCEEEEEEEcCCCEEEEEEC--------------CCcEEEcCEEEEccCCCc
Confidence 112234444444 46799999999999998765432334442 124799999999999544
No 258
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.02 E-value=2.2e-05 Score=77.21 Aligned_cols=98 Identities=7% Similarity=0.120 Sum_probs=71.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
...++|||+|..|+..|..+++. |.+|+++++.+.+.. .+ .
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~~~l~---------------------------~~-----------~ 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGKEILS---------------------------RF-----------D 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSST---------------------------TS-----------C
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCcccc---------------------------cc-----------C
Confidence 35899999999999999999999 999999999865310 00 1
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEE-EceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVV-TNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~-~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
..+.+.+.+.+ ++.|++++++++|.++..+++.+..|. .. ++. +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~--------------~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAM-EEKGIRILCEDIIQSVSADADGRRVATTMK--------------HGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHH-HHTTCEEECSCCEEEEEECTTSCEEEEESS--------------SCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HHCCCEEECCCEEEEEEEcCCCEEEEEEcC--------------CCe-EEeCEEEEeeCccc
Confidence 12234444444 478999999999999987655433444 32 124 99999999999543
No 259
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.02 E-value=2.2e-05 Score=78.03 Aligned_cols=99 Identities=12% Similarity=0.181 Sum_probs=70.2
Q ss_pred ccEEEECCChHHHHHHHHhhcC--CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN--PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~--~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
..++|||+|..|+.+|..|++. +|.+|+|+|+.+.+-. .++
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------~~d---------- 234 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR---------------------------GFD---------- 234 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT---------------------------TSC----------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc---------------------------ccC----------
Confidence 5799999999999999998764 2799999999865410 011
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.++...+.+.+ ++.|++++++++|.++..+++....|... ++.++.+|.||+|+|...
T Consensus 235 -~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~~~~v~~~--------------~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 235 -ETIREEVTKQL-TANGIEIMTNENPAKVSLNTDGSKHVTFE--------------SGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp -HHHHHHHHHHH-HHTTCEEEESCCEEEEEECTTSCEEEEET--------------TSCEEEESEEEECSCEEE
T ss_pred -HHHHHHHHHHH-HhCCCEEEeCCEEEEEEEcCCceEEEEEC--------------CCcEEEcCEEEECCCCcc
Confidence 12233444444 46799999999999998765433334442 135799999999999543
No 260
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.98 E-value=3.9e-05 Score=75.85 Aligned_cols=102 Identities=14% Similarity=0.160 Sum_probs=69.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..++|||+|..|+.+|..|++. |.+|+++++..... .+ ..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~----------------------------~~-----------d~ 227 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL-GYEPTVMVRSIVLR----------------------------GF-----------DQ 227 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCSST----------------------------TS-----------CH
T ss_pred CcEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCCCc----------------------------cc-----------CH
Confidence 4799999999999999999999 99999999853210 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+.+.+ ++.|++++++++|.++..+++....+...+ .. .++..++.+|.||+|+|...
T Consensus 228 ~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~------~~---~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 228 QMAELVAASM-EERGIPFLRKTVPLSVEKQDDGKLLVKYKN------VE---TGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHH-HHTTCCEEETEEEEEEEECTTSCEEEEEEE------TT---TCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HhCCCEEEeCCEEEEEEEcCCCcEEEEEec------CC---CCceeEEEcCEEEECccccc
Confidence 2233444444 467999999999999987544222244321 11 11235799999999999543
No 261
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.97 E-value=7.3e-05 Score=73.19 Aligned_cols=140 Identities=11% Similarity=0.150 Sum_probs=75.2
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcce-------ecC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYD-------EQD 162 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~-------~~~ 162 (359)
...|+|||+|..|+.+|..|++. ++.+|+++++...+-- .....+......+...+++..+..... ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p---~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~ 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP---ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNT 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB---CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC---ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhcc
Confidence 46899999999999999999874 5789999999864310 000000000111111122211110000 000
Q ss_pred CeEEEec--hHHHHHHHH-HHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcC
Q 018188 163 NYVVIKH--AALFTSTIM-SKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSC 239 (359)
Q Consensus 163 ~~~~~~~--~~~~~~~L~-~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAt 239 (359)
.|..... .......++ +.+....|++++.+++|+++..+++.+. +...+ . .+++..++.+|.||+||
T Consensus 304 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~-v~~~~------~---~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 304 NYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIE-LALRD------A---GSGELSVETYDAVILAT 373 (463)
T ss_dssp TSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEE-EEEEE------T---TTCCEEEEEESEEEECC
T ss_pred CCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEE-EEEEE------c---CCCCeEEEECCEEEEee
Confidence 0100000 111222222 2333347999999999999988776543 33321 1 12234579999999999
Q ss_pred CCCC
Q 018188 240 GHDG 243 (359)
Q Consensus 240 Gg~s 243 (359)
|...
T Consensus 374 G~~p 377 (463)
T 3s5w_A 374 GYER 377 (463)
T ss_dssp CEEC
T ss_pred CCCC
Confidence 9554
No 262
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.94 E-value=7.9e-05 Score=68.60 Aligned_cols=97 Identities=19% Similarity=0.277 Sum_probs=70.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+....-.
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~~~~~------------------------------------------ 189 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRDAFRA------------------------------------------ 189 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCS------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccccccc------------------------------------------
Confidence 5799999999999999999999 999999998654200
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
...+........+++.+..+.+.++...++...++...+. ..++..++.+|.||+|+|..
T Consensus 190 --~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 190 --SKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNL---------VSGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp --CHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEE
T ss_pred --cchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeec---------ccccceeeccccceEecccc
Confidence 0111223334678888888888888776666666655321 12245789999999999944
No 263
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.94 E-value=6.3e-05 Score=74.17 Aligned_cols=103 Identities=11% Similarity=0.127 Sum_probs=70.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .+ ..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------~~-----------d~ 228 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHDKVLR---------------------------SF-----------DS 228 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT---------------------------TS-----------CH
T ss_pred ccEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCCcccc---------------------------cc-----------CH
Confidence 5799999999999999999999 999999999765410 00 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCE-EEEEEEceeeeeccCCCCCCCC--CeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMD--PNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~-v~gv~~~~~~~~~~~~~~~~g~--~~~i~A~~VIlAtGg~s 243 (359)
.+.+.+.+.+ ++.|+++++++++.++..+++. ...+...+ .+ .+. ..++.+|.||+|+|...
T Consensus 229 ~~~~~~~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~------~~---~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 229 MISTNCTEEL-ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAV------PG---RLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHH-HHTTCEEETTEEEEEEEECSSSEEEEEEECC------TT---SCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEEEcCCCcEEEEEEcc------CC---CCcccceEEEcCEEEEeecccc
Confidence 2233333444 4689999999999999875443 22343321 00 011 15799999999999543
No 264
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.92 E-value=6e-06 Score=81.79 Aligned_cols=40 Identities=43% Similarity=0.721 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
.+||+|||||++|+++|+.|++. |.+|+|+|+...+||..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGGRV 72 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSBTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCce
Confidence 57999999999999999999999 99999999999998864
No 265
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.91 E-value=6.2e-05 Score=74.53 Aligned_cols=100 Identities=14% Similarity=0.214 Sum_probs=68.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
-.|+|||+|..|+.+|..|++. |.+|+++++...... + ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~l~~----------------------------~-----------d~ 225 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGI-GLDTTVMMRSIPLRG----------------------------F-----------DQ 225 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT----------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEcCccccc----------------------------C-----------CH
Confidence 4799999999999999999999 999999998642100 1 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
++.+.+.+.+ ++.|+++++++.+.++...+ +.+. +...+ .+ .+...++.+|.||+|+|-.
T Consensus 226 ~~~~~l~~~l-~~~gv~~~~~~~v~~i~~~~~~~~~-v~~~~------~~---~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 226 QMSSLVTEHM-ESHGTQFLKGCVPSHIKKLPTNQLQ-VTWED------HA---SGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHH-HHTTCEEEETEEEEEEEECTTSCEE-EEEEE------TT---TTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEEEcCCCcEE-EEEEe------CC---CCeeEEEECCEEEEcccCC
Confidence 2233434444 46899999999999997744 3332 33321 00 0122368999999999954
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.87 E-value=5.4e-05 Score=70.09 Aligned_cols=163 Identities=13% Similarity=0.162 Sum_probs=101.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. +.+|+++++...+.. +
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~-~~~v~~~~~~~~~~~----------------------------~------------- 192 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPI-AKEVSIIHRRDKFRA----------------------------H------------- 192 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-BSEEEEECSSSSCSS----------------------------C-------------
T ss_pred CEEEEECCCHhHHHHHHHHHhh-CCeEEEEEecCcCCc----------------------------c-------------
Confidence 5799999999999999999999 999999998764310 0
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 251 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~ 251 (359)
....+.+ ++.|++++.++++.++..+++ +.++...+ . ..++..++.+|.||+|+|-.... .
T Consensus 193 ---~~~~~~l-~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~------~---~~g~~~~~~~D~vv~a~G~~p~~-----~ 253 (332)
T 3lzw_A 193 ---EHSVENL-HASKVNVLTPFVPAELIGEDK-IEQLVLEE------V---KGDRKEILEIDDLIVNYGFVSSL-----G 253 (332)
T ss_dssp ---HHHHHHH-HHSSCEEETTEEEEEEECSSS-CCEEEEEE------T---TSCCEEEEECSEEEECCCEECCC-----G
T ss_pred ---HHHHHHH-hcCCeEEEeCceeeEEecCCc-eEEEEEEe------c---CCCceEEEECCEEEEeeccCCCc-----h
Confidence 0012223 357999999999999976554 44455432 0 11234679999999999954321 2
Q ss_pred HHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCCC
Q 018188 252 RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQP 329 (359)
Q Consensus 252 ~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~ 329 (359)
.+...|+.. ....+.++ +. .+.-.||+|..|..+... +.++. ....+..|..++..+++.+...
T Consensus 254 ~~~~~~~~~---~~g~i~vd--~~-----~~t~~~~vya~GD~~~~~-~~~~~---~~~A~~~g~~aa~~i~~~l~~~ 317 (332)
T 3lzw_A 254 PIKNWGLDI---EKNSIVVK--ST-----METNIEGFFAAGDICTYE-GKVNL---IASGFGEAPTAVNNAKAYMDPK 317 (332)
T ss_dssp GGGGSSCCE---ETTEEECC--TT-----SBCSSTTEEECGGGEECT-TCCCC---HHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhhcCccc---cCCeEEeC--CC-----CceecCCEEEccceecCC-CCcce---EeeehhhHHHHHHHHHHhhChh
Confidence 244444311 11112222 11 122359999998765421 21111 1122256788889899888654
No 267
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.84 E-value=6.2e-05 Score=74.99 Aligned_cols=100 Identities=13% Similarity=0.221 Sum_probs=64.6
Q ss_pred cEEEECCChHHHHHHHHhhcC-------------CCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcce
Q 018188 93 DVIVVGAGSAGLSCAYEISKN-------------PSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYD 159 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~-------------~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~ 159 (359)
.++|||||+.|+.+|..|++. ...+|+|+|..+.+-. .++
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~---------------------------~~~ 271 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN---------------------------MFE 271 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST---------------------------TSC
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc---------------------------CCC
Confidence 699999999999999888642 0368999999876411 011
Q ss_pred ecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEE-EEEceeeeeccCCCCCCCCCeEEEcCEEEEc
Q 018188 160 EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGG-VVTNWALVSMNHDTQSCMDPNVMEAKIVVSS 238 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~g-v~~~~~~~~~~~~~~~~g~~~~i~A~~VIlA 238 (359)
..+.+.+ .+.+++.||+++++++|+++. ++.+.. +...+ .. ....+|.+|.||.|
T Consensus 272 -----------~~~~~~~-~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~d--------g~--~~~~~i~ad~viwa 327 (502)
T 4g6h_A 272 -----------KKLSSYA-QSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHED--------GK--ITEETIPYGTLIWA 327 (502)
T ss_dssp -----------HHHHHHH-HHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTT--------SC--EEEEEEECSEEEEC
T ss_pred -----------HHHHHHH-HHHHHhcceeeecCceEEEEe--CCceEEEEEecC--------cc--cceeeeccCEEEEc
Confidence 1122333 333357899999999999873 443321 21110 00 01257999999999
Q ss_pred CCCCC
Q 018188 239 CGHDG 243 (359)
Q Consensus 239 tGg~s 243 (359)
+|-..
T Consensus 328 ~Gv~~ 332 (502)
T 4g6h_A 328 TGNKA 332 (502)
T ss_dssp CCEEC
T ss_pred cCCcC
Confidence 99544
No 268
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.83 E-value=1.1e-05 Score=79.49 Aligned_cols=40 Identities=40% Similarity=0.586 Sum_probs=36.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~GG~~ 131 (359)
.+||+|||||++|+.+|+.|++. |. +|+|+|++..+||.+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCCCce
Confidence 47999999999999999999999 98 899999999888764
No 269
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.79 E-value=7.5e-05 Score=72.95 Aligned_cols=92 Identities=16% Similarity=0.277 Sum_probs=66.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..++|||||..|+.+|..+++. |.+|+|+|+...+.. .++.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ll~---------------------------~~d~----------- 188 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDKINK---------------------------LMDA----------- 188 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSCCST---------------------------TSCG-----------
T ss_pred cEEEEECCccchhhhHHHHHhc-CCcceeeeeeccccc---------------------------cccc-----------
Confidence 4799999999999999999999 999999999875411 0110
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
++.+.+.+.+ ++.|++++++++|+++ +++. +... +..++.+|.||+|+|..
T Consensus 189 ~~~~~~~~~l-~~~gV~i~~~~~v~~~--~~~~---v~~~--------------~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 189 DMNQPILDEL-DKREIPYRLNEEINAI--NGNE---ITFK--------------SGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp GGGHHHHHHH-HHTTCCEEESCCEEEE--ETTE---EEET--------------TSCEEECSEEEECCCEE
T ss_pred hhHHHHHHHh-hccceEEEeccEEEEe--cCCe---eeec--------------CCeEEeeeeEEEEecee
Confidence 1123333333 4679999999998876 3343 2332 24679999999999944
No 270
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.73 E-value=0.00031 Score=70.17 Aligned_cols=100 Identities=19% Similarity=0.264 Sum_probs=66.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
-.++|||+|..|+.+|..|++. |.+|+++++..... .+ ..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~l~----------------------------~~-----------d~ 250 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI-GLDVTVMVRSILLR----------------------------GF-----------DQ 250 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSST----------------------------TS-----------CH
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEecccccc----------------------------cC-----------CH
Confidence 4699999999999999999999 99999999853210 01 11
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeC----CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG----GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~----~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
++.+.+.+.+ ++.|+++++++++.++...+ +.+. +.... .++. ...++.+|.||+|+|..
T Consensus 251 ~~~~~~~~~l-~~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~------~~g~---~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 251 DMANKIGEHM-EEHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQS------TNSE---EIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp HHHHHHHHHH-HHTTCEEEESEEEEEEEEEECCTTCEEE-EEEEE------SSSS---CEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCeEEEEEEccCCCCceEE-EEEEE------CCCc---EEEEEECCEEEEecCCc
Confidence 2233434444 46899999999888876532 3332 22210 1100 12467899999999954
No 271
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.73 E-value=0.00017 Score=70.83 Aligned_cols=99 Identities=16% Similarity=0.171 Sum_probs=68.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+... + ...
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~----------~d~ 214 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDRALIT---------------------------L----------EDQ 214 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT---------------------------S----------CCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcCCCC---------------------------C----------CCH
Confidence 5799999999999999999999 9999999998654110 0 001
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeC-CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
++.+.+. +.. + ++++.+++|.++..++ +.+. +... . .+|+..++.+|.||+|+|...
T Consensus 215 ~~~~~l~-~~l-~--v~i~~~~~v~~i~~~~~~~v~-v~~~-------~---~~G~~~~i~~D~vi~a~G~~p 272 (466)
T 3l8k_A 215 DIVNTLL-SIL-K--LNIKFNSPVTEVKKIKDDEYE-VIYS-------T---KDGSKKSIFTNSVVLAAGRRP 272 (466)
T ss_dssp HHHHHHH-HHH-C--CCEECSCCEEEEEEEETTEEE-EEEC-------C---TTSCCEEEEESCEEECCCEEE
T ss_pred HHHHHHH-hcC-E--EEEEECCEEEEEEEcCCCcEE-EEEE-------e---cCCceEEEEcCEEEECcCCCc
Confidence 1223332 222 2 9999999999998765 6554 3332 0 012345899999999999543
No 272
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.69 E-value=0.00016 Score=68.07 Aligned_cols=104 Identities=13% Similarity=0.254 Sum_probs=64.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+... .++.. . ....
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~~~~--------------------------~~d~~--~---~~~~ 214 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTGLNDP--------------------------DADPS--V---RLSP 214 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECC------------------------------------CT--T---SCCH
T ss_pred CEEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCCCCCC--------------------------CCCCC--c---cCCH
Confidence 4799999999999999999999 9999999987643100 00000 0 0011
Q ss_pred HHHHHHHHHHHhCCC-cEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEE-EcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPN-VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM-EAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~g-v~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i-~A~~VIlAtGg~s 243 (359)
.+.+.+.+.+ ++.| ++++.+++|.++..+++.+ .+...+ +.++ .+|.||+|+|-..
T Consensus 215 ~~~~~l~~~l-~~~g~v~~~~~~~v~~i~~~~~~~-~v~~~~--------------g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 215 YTRQRLGNVI-KQGARIEMNVHYTVKDIDFNNGQY-HISFDS--------------GQSVHTPHEPILATGFDA 272 (369)
T ss_dssp HHHHHHHHHH-HTTCCEEEECSCCEEEEEEETTEE-EEEESS--------------SCCEEESSCCEECCCBCG
T ss_pred HHHHHHHHHH-hhCCcEEEecCcEEEEEEecCCce-EEEecC--------------CeEeccCCceEEeeccCC
Confidence 1223333333 4676 9999999999987665543 233321 2334 4699999999543
No 273
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.65 E-value=3.6e-05 Score=80.17 Aligned_cols=41 Identities=24% Similarity=0.426 Sum_probs=37.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
..+||+|||||++|+.+|+.|++. |.+|+|+|+...+||..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~GG~~ 428 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKIGGHL 428 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTH
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCee
Confidence 357999999999999999999999 99999999998888764
No 274
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.64 E-value=8.3e-05 Score=78.55 Aligned_cols=40 Identities=28% Similarity=0.540 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
.+||+|||+|++||++|+.|++. |.+|+|+|+...+||..
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCCCce
Confidence 47999999999999999999999 99999999999998853
No 275
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.61 E-value=3.9e-05 Score=79.07 Aligned_cols=39 Identities=28% Similarity=0.553 Sum_probs=36.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGG 130 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~ 130 (359)
.+||+|||+|++|+++|+.|++. |.+|+|+|+...+||.
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCCCc
Confidence 47999999999999999999999 9999999999988874
No 276
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.60 E-value=0.00076 Score=62.10 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=65.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+-. .
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~~~---------------------------------------~-- 183 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDELRA---------------------------------------Q-- 183 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSCCS---------------------------------------C--
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEecccccCc---------------------------------------c--
Confidence 4799999999999999999999 999999999865410 0
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
........++.++.......+......+.......... . ..++...+.+|.|+.+.|..
T Consensus 184 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~d~v~~~~g~~ 242 (312)
T 4gcm_A 184 ---RILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTS------T---KDGSEETHEADGVFIYIGMK 242 (312)
T ss_dssp ---HHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEE------T---TTCCEEEEECSEEEECSCEE
T ss_pred ---hhHHHHHHHhcCcceeeecceeeeeccccccccceeee------e---cCCceeEEeeeeEEeecCCC
Confidence 00012223467788888877776666554433322211 0 12245789999999999944
No 277
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.60 E-value=0.00059 Score=69.18 Aligned_cols=99 Identities=17% Similarity=0.236 Sum_probs=64.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
-.|+|||||..|+.+|..|++. |.+|+++++.....+ ++ .
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~~----------------------------~d-----------~ 326 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL-GGDVTVMVRSILLRG----------------------------FD-----------Q 326 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT----------------------------SC-----------H
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEECCcCcCc----------------------------CC-----------H
Confidence 4799999999999999999999 999999998721100 00 1
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEe------C---CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK------G---GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~------~---~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.+...+.+.+ ++.|+++++++.+.++... + +++. +.... . ++....+.+|.||+|+|..
T Consensus 327 ~~~~~~~~~l-~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~------~----~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYM-ENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHY------T----DGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHH-HHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEE------T----TSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHH-HhCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEe------C----CCcEEeccCCEEEEEeCCc
Confidence 1223333333 4679999999888887542 2 3332 21110 0 1122345699999999954
No 278
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.58 E-value=6e-05 Score=78.01 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=66.9
Q ss_pred ccEEEEC--CChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 92 TDVIVVG--AGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 92 ~DVvIIG--gG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
.+|+||| +|..|+.+|..|++. |.+|+++++...+.... .
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~~l~~~~---------------------------~---------- 565 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGAQVSSWT---------------------------N---------- 565 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSSSTTGGG---------------------------G----------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhC-CCeeEEEeccccccccc---------------------------c----------
Confidence 4699999 999999999999999 99999999886542100 0
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~ 242 (359)
.......+.+.+ ++.|++++++++|+++.. +.+. +... ..++..++.+|.||+|+|..
T Consensus 566 ~~~~~~~l~~~l-~~~GV~i~~~~~V~~i~~--~~~~-v~~~-----------~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 566 NTFEVNRIQRRL-IENGVARVTDHAVVAVGA--GGVT-VRDT-----------YASIERELECDAVVMVTARL 623 (690)
T ss_dssp GGTCHHHHHHHH-HHTTCEEEESEEEEEEET--TEEE-EEET-----------TTCCEEEEECSEEEEESCEE
T ss_pred cchhHHHHHHHH-HHCCCEEEcCcEEEEEEC--CeEE-EEEc-----------cCCeEEEEECCEEEECCCCC
Confidence 000123333344 467999999999999853 3322 2211 01234689999999999943
No 279
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.54 E-value=0.00014 Score=66.19 Aligned_cols=152 Identities=11% Similarity=0.077 Sum_probs=88.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
...|+|||+|..|+.+|..|++. | +|+++++.... +
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~~------------------------------~------------ 176 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIVE------------------------------P------------ 176 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTCC------------------------------C------------
T ss_pred CCEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCCC------------------------------C------------
Confidence 35899999999999999999999 8 99999876421 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHH
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 250 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~ 250 (359)
...+.+.+ ++.|++++. +++.++.. +. .+... +..++.+|.||+|+|.....
T Consensus 177 ---~~~~~~~l-~~~gv~i~~-~~v~~i~~--~~--~v~~~--------------~g~~~~~D~vi~a~G~~p~~----- 228 (297)
T 3fbs_A 177 ---DADQHALL-AARGVRVET-TRIREIAG--HA--DVVLA--------------DGRSIALAGLFTQPKLRITV----- 228 (297)
T ss_dssp ---CHHHHHHH-HHTTCEEEC-SCEEEEET--TE--EEEET--------------TSCEEEESEEEECCEEECCC-----
T ss_pred ---CHHHHHHH-HHCCcEEEc-ceeeeeec--CC--eEEeC--------------CCCEEEEEEEEEccCcccCc-----
Confidence 01122233 467999986 78887743 22 34443 23679999999999954321
Q ss_pred HHHHhcCCcccccccc-cccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCC
Q 018188 251 KRLKSIGMIDSVPGMK-ALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 328 (359)
Q Consensus 251 ~~~~~~g~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~ 328 (359)
..+...|+........ .+.++ +. .+.-.|++|..|..... +. ........|..++..+.+.+..
T Consensus 229 ~~~~~~g~~~~~~~~G~~i~vd--~~-----~~t~~~~vya~GD~~~~----~~---~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 229 DWIEKLGCAVEEGPMGSTIVTD--PM-----KQTTARGIFACGDVARP----AG---SVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp SCHHHHTCCEEEETTEEEECCC--TT-----CBCSSTTEEECSGGGCT----TC---CHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHhcCCccccCCCCceEEeC--CC-----CccCCCCEEEEeecCCc----hH---HHHHHHHhHHHHHHHHHHHHhh
Confidence 1233344311000000 12222 11 12345899998764321 11 1112225677777777777643
No 280
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.47 E-value=0.0002 Score=76.87 Aligned_cols=162 Identities=15% Similarity=0.173 Sum_probs=97.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
..|+|||+|..|+.+|..|++. |.+|+|+|+.+.+. ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~~~~-----------------------------------------~~ 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT-GGVVAVIDARSSIS-----------------------------------------AA 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG-TCCSEEEESCSSCC-----------------------------------------HH
T ss_pred CeEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCCccc-----------------------------------------hh
Confidence 4799999999999999999999 99999999986531 00
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEe-CCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHH
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 250 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~ 250 (359)
.+.+ ++.|+++++++.+.++..+ ++++.+|...+ .+.. +.++...++.+|.||+|+|-... .
T Consensus 323 ------~~~l-~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~----~~~~-~~~G~~~~i~~D~Vv~a~G~~P~-----~ 385 (965)
T 2gag_A 323 ------AAQA-VADGVQVISGSVVVDTEADENGELSAIVVAE----LDEA-RELGGTQRFEADVLAVAGGFNPV-----V 385 (965)
T ss_dssp ------HHHH-HHTTCCEEETEEEEEEEECTTSCEEEEEEEE----ECTT-CCEEEEEEEECSEEEEECCEEEC-----C
T ss_pred ------HHHH-HhCCeEEEeCCEeEEEeccCCCCEEEEEEEe----cccc-CCCCceEEEEcCEEEECCCcCcC-----h
Confidence 1223 3579999999999999764 56666666531 0000 00012367999999999994332 1
Q ss_pred HHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccceEEEehHHHHHHHHHHhCCCc
Q 018188 251 KRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPN 330 (359)
Q Consensus 251 ~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~ 330 (359)
..+...+. .+.++. ....+....-.|++|..|.... . +.+...+..|..++..++..++...
T Consensus 386 ~l~~~~~g--------~i~vd~--~~~~~v~~ts~p~IyAaGD~a~----~----~~l~~A~~~G~~aA~~i~~~lg~~~ 447 (965)
T 2gag_A 386 HLHSQRQG--------KLDWDT--TIHAFVPADAVANQHLAGAMTG----R----LDTASALSTGAATGAAAATAAGFAT 447 (965)
T ss_dssp HHHHHTTC--------CEEEET--TTTEEEECSCCTTEEECGGGGT----C----CSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHhCCC--------cEEEcC--cccccccCCCCCCEEEEEecCC----c----hhHHHHHHHHHHHHHHHHHHcCCCc
Confidence 22222221 111111 1000000123488888875331 1 1111233667888888888887543
No 281
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.44 E-value=0.00059 Score=73.72 Aligned_cols=105 Identities=20% Similarity=0.252 Sum_probs=70.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
-.|+|||||..|+.+|..|.+. |. +|+|+++.... .+. .+ .
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~~~---------~~~-----------------~~-----------~ 374 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRC-GARRVFLVFRKGFV---------NIR-----------------AV-----------P 374 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCGG---------GCC-----------------SC-----------H
T ss_pred CcEEEECCChHHHHHHHHHHHc-CCCEEEEEEecChh---------hCC-----------------CC-----------H
Confidence 3899999999999999999999 86 89999987521 000 00 0
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCC---CCCCCeEEEcCEEEEcCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ---SCMDPNVMEAKIVVSSCGHD 242 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~---~~g~~~~i~A~~VIlAtGg~ 242 (359)
.+ ++.+ ++.|+++++++.+.++..+++++.++.....- .+.++. ..++..++.+|.||+|+|..
T Consensus 375 ~e-----~~~~-~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~--~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 375 EE-----VELA-KEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE--QDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp HH-----HHHH-HHTTCEEECSEEEEEEEEETTEEEEEEEEEEE--ECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred HH-----HHHH-HHcCCEEEeCCCceEEEccCCeEEEEEEEEeE--EcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 00 1223 35699999999999998777888877653110 000000 01123579999999999954
No 282
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.42 E-value=0.0011 Score=65.26 Aligned_cols=59 Identities=17% Similarity=0.132 Sum_probs=36.0
Q ss_pred CCcEEEcceeeeeEEEeC-C-EEEEEEEceeeeecc-CCCC--CCCCCeEEEcCEEEEcCCCCC
Q 018188 185 PNVKLFNAVAAEDLIVKG-G-RVGGVVTNWALVSMN-HDTQ--SCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 185 ~gv~i~~~~~V~~l~~~~-~-~v~gv~~~~~~~~~~-~~~~--~~g~~~~i~A~~VIlAtGg~s 243 (359)
.|+++++++.+.++..++ + ++.+|.......... .... .+++..++.+|.||.|+|-.+
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 789999999999987653 5 676665531100000 0000 011236799999999999554
No 283
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.39 E-value=0.00024 Score=69.88 Aligned_cols=173 Identities=14% Similarity=0.136 Sum_probs=93.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKH 169 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 169 (359)
..+|+|||||..|+-+|..+.+. |. +|+++++..... ++. .
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~~~---------------------------~p~----------~ 305 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDRKN---------------------------MPG----------S 305 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCSTT---------------------------CSS----------C
T ss_pred CCEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCccC---------------------------CCC----------C
Confidence 35799999999999999999998 87 599999875420 000 0
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeee-ccCCCC-----CCCCCeEEEcCEEEEcCCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS-MNHDTQ-----SCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~-~~~~~~-----~~g~~~~i~A~~VIlAtGg~s 243 (359)
. .. ++.+. +.|+++++++.+.++.. ++++.++.+...... .+.++. .+++..++.+|.||+|+|-..
T Consensus 306 ~----~e-~~~~~-~~Gv~~~~~~~~~~i~~-~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 306 Q----RE-VAHAE-EEGVEFIWQAAPEGFTG-DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEP 378 (456)
T ss_dssp H----HH-HHHHH-HTTCEEECCSSSCCEEE-EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred H----HH-HHHHH-HCCCEEEeCCCceEEeC-CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCC
Confidence 0 01 22333 56999999999998874 455544433210000 000000 011235799999999999532
Q ss_pred CCCchHHHHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCc-cceEEEehHHHHHHH
Q 018188 244 PFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPT-FGAMMISGQKAAHLA 322 (359)
Q Consensus 244 ~~~~~g~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~-~g~~l~sG~~~~~l~ 322 (359)
. .....+...|+...-.+ .+.++ +. ..+.-.|++|..|+.+. ++. .-..+..|..++..+
T Consensus 379 ~---~~~~~l~~~gl~~~~~G--~i~vd--~~----~~~Ts~~~VfA~GD~~~--------g~~~v~~A~~~G~~aA~~i 439 (456)
T 2vdc_G 379 E---DLPNAFDEPELKVTRWG--TLLVD--HR----TKMTNMDGVFAAGDIVR--------GASLVVWAIRDGRDAAEGI 439 (456)
T ss_dssp C---CHHHHHHSTTSCBCTTS--SBCCC--TT----TCBCSSTTEEECGGGGS--------SCCSHHHHHHHHHHHHHHH
T ss_pred C---cchhhcccCCeeECCCC--CEEEC--CC----CCcCCCCCEEEeccccC--------CchHHHHHHHHHHHHHHHH
Confidence 1 11113344443111011 11121 11 01123588998875331 111 111225677888877
Q ss_pred HHHhC
Q 018188 323 LKALG 327 (359)
Q Consensus 323 l~~~~ 327 (359)
.+.|.
T Consensus 440 ~~~L~ 444 (456)
T 2vdc_G 440 HAYAK 444 (456)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 77663
No 284
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.37 E-value=0.00013 Score=72.74 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=33.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSP 127 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~ 127 (359)
+||++|||+|++|+.+|+.|++. |.+|+|||++...
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLW 40 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCC
Confidence 58999999999999999999998 9999999998743
No 285
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.37 E-value=0.00014 Score=74.28 Aligned_cols=40 Identities=33% Similarity=0.378 Sum_probs=38.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGA 131 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~ 131 (359)
+|||+|||+|..|...|..|++. |.+|++|||+...||..
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccCcc
Confidence 69999999999999999999999 99999999999999875
No 286
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.29 E-value=0.00016 Score=72.09 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=33.2
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..+||++|||+|++|+.+|+.|++. |.+|+|||++.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 3469999999999999999999998 99999999975
No 287
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.09 E-value=0.0019 Score=63.31 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHhhcC-------------------CC-CeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-------------------PS-IRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-------------------~G-~~V~vlEk~~~ 126 (359)
-.|+|||+|..|+.+|..|++. .| .+|+|+++...
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 5799999999999999998862 14 48999998754
No 288
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.09 E-value=0.0013 Score=65.99 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
...|+|||+|..|+.+|..|++. +.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 35899999999999999999999 999999999875
No 289
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.08 E-value=0.0025 Score=65.55 Aligned_cols=29 Identities=21% Similarity=0.387 Sum_probs=24.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEE
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAI 120 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~v 120 (359)
...|+|||||..|+.+|..|++. |.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~-G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQP-GESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCC-SSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhc-CCCccc
Confidence 35899999999999999999988 876553
No 290
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.05 E-value=0.00018 Score=74.34 Aligned_cols=35 Identities=31% Similarity=0.551 Sum_probs=33.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC--------CeEEEEeecc-CC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPS--------IRVAIIEQSV-SP 127 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G--------~~V~vlEk~~-~~ 127 (359)
.+|+|||||++||++|+.|++. | .+|+|+|++. .+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 6899999999999999999998 7 9999999998 77
No 291
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.98 E-value=0.00083 Score=69.90 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=30.9
Q ss_pred ccEEEEC--CChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVG--AGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIG--gG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+||| ||..|+.+|..|++. |.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 4799998 999999999999999 99999999986
No 292
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.97 E-value=0.0044 Score=62.18 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
...|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCC
Confidence 35799999999999999999999 999999999875
No 293
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.93 E-value=0.0018 Score=63.57 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=32.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSP 127 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~ 127 (359)
..|+|||+|.+|+-+|..|++. |.+|+++++...+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~~ 232 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTAP 232 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCCC
Confidence 5799999999999999999999 9999999987653
No 294
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.90 E-value=0.002 Score=59.16 Aligned_cols=90 Identities=17% Similarity=0.141 Sum_probs=62.9
Q ss_pred ccEEEECCCh-HHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEech
Q 018188 92 TDVIVVGAGS-AGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHA 170 (359)
Q Consensus 92 ~DVvIIGgG~-aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 170 (359)
.+++|||||. +++.+|..+.+. +.+|+++++....
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~-~~~v~i~~~~~~~------------------------------------------- 182 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW-STDLVIATNGNEL------------------------------------------- 182 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT-CSCEEEECSSCCC-------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhC-CceEEEEeccccc-------------------------------------------
Confidence 4688888886 567888888877 8999999876432
Q ss_pred HHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018188 171 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGP 244 (359)
Q Consensus 171 ~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~ 244 (359)
...+.+.+ ++.|++++.+ .+..+..+++++.+|... +..++.++.+|++.|+..+
T Consensus 183 ---~~~~~~~l-~~~g~~~~~~-~v~~~~~~~~~~~~v~~~--------------~g~~i~~~~~vi~~g~~~~ 237 (304)
T 4fk1_A 183 ---SQTIMDEL-SNKNIPVITE-SIRTLQGEGGYLKKVEFH--------------SGLRIERAGGFIVPTFFRP 237 (304)
T ss_dssp ---CHHHHHHH-HTTTCCEECS-CEEEEESGGGCCCEEEET--------------TSCEECCCEEEECCEEECS
T ss_pred ---hhhhhhhh-hccceeEeee-eEEEeecCCCeeeeeecc--------------ccceeeecceeeeeccccC
Confidence 11223333 3678888877 466665556666667664 2467899999999997664
No 295
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.58 E-value=0.0036 Score=60.95 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCe-EEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIR-VAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~-V~vlEk~~ 125 (359)
..+|+|||+|.+|+-+|..|++. +.+ |+++++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCC
Confidence 35799999999999999999999 888 99999874
No 296
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.46 E-value=0.01 Score=59.62 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
...|+|||+|..|+.+|..|++. +.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 35899999999999999999998 999999999874
No 297
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.45 E-value=0.013 Score=56.72 Aligned_cols=176 Identities=15% Similarity=0.157 Sum_probs=89.5
Q ss_pred cEEEECCChH----H--HHHH----HHhhcCCCCe-----EEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCc
Q 018188 93 DVIVVGAGSA----G--LSCA----YEISKNPSIR-----VAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVE 157 (359)
Q Consensus 93 DVvIIGgG~a----G--l~aA----~~La~~~G~~-----V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~ 157 (359)
.++|||+|+. | +..| ..+.+. |.+ |+++++.+.++.. +++
T Consensus 151 ~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~-g~~~~~~~Vtlv~~~~~~~~~------------------------~l~ 205 (437)
T 3sx6_A 151 GPIVIGAMAGASCFGPAYEYAMIVASDLKKR-GMRDKIPSFTFITSEPYIGHL------------------------GIQ 205 (437)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHT-TCGGGCSCEEEEESSSSTTCT------------------------TTT
T ss_pred CEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc-CCcccCcEEEEEcCCcccccc------------------------ccC
Confidence 5789999654 3 5555 555566 765 9999998765320 000
Q ss_pred ceecCCeEEEechHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEE
Q 018188 158 YDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVS 237 (359)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIl 237 (359)
. . ...... +.+.+++.||+++++++|+++. ++.+.-.... .+ +...+..++.+|.||+
T Consensus 206 --~---~------~~~~~~-~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~-------~~-g~~~~~~~i~~D~vv~ 263 (437)
T 3sx6_A 206 --G---V------GDSKGI-LTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVD-------EK-GETIKEMVLPVKFGMM 263 (437)
T ss_dssp --C---C------TTHHHH-HHHHHHHTTCEEECSEEEEEEE--TTEEEEEEEC-------TT-SCEEEEEEEECSEEEE
T ss_pred --c---c------hHHHHH-HHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecc-------cC-CccccceEEEEeEEEE
Confidence 0 0 011222 3333457899999999999884 4443211110 00 0000146799999999
Q ss_pred cCCCCCCCCchHHHHHHhcCCcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCC----CCCccce-EE
Q 018188 238 SCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPR----MGPTFGA-MM 312 (359)
Q Consensus 238 AtGg~s~~~~~g~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~----~~~~~g~-~l 312 (359)
|+|..+. .... ...|+... ...+.++ +. +-..-.|++|..|+.+........ ..|..+. ..
T Consensus 264 ~~g~~~~---~~~~--~~~gl~~~---~G~i~Vd--~~----l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~ 329 (437)
T 3sx6_A 264 IPAFKGV---PAVA--GVEGLCNP---GGFVLVD--EH----QRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIE 329 (437)
T ss_dssp ECCEECC---HHHH--TSTTTBCT---TSCBCBC--TT----SBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHH
T ss_pred cCCCcCc---hhhh--ccccccCC---CCcEEeC--hh----ccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHH
Confidence 9995442 1111 11222100 0111222 11 111135899999876654321000 0121221 12
Q ss_pred EehHHHHHHHHHHhCCC
Q 018188 313 ISGQKAAHLALKALGQP 329 (359)
Q Consensus 313 ~sG~~~~~l~l~~~~~~ 329 (359)
..|+.+++.+++.+...
T Consensus 330 ~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 330 SMVSAAVHNIKADLEGR 346 (437)
T ss_dssp HHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 56788888888888543
No 298
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.19 E-value=0.035 Score=53.63 Aligned_cols=125 Identities=18% Similarity=0.152 Sum_probs=65.4
Q ss_pred HHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHHhcC
Q 018188 178 MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIG 257 (359)
Q Consensus 178 ~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~~~g 257 (359)
+++..++.||++++++.|+++ +++++. ... .+++..++.+|.||+|+|..++ ..+...+
T Consensus 206 l~~~l~~~GV~~~~~~~v~~v--~~~~~~---~~~----------~~g~~~~i~~d~vi~~~G~~~~------~~~~~~~ 264 (430)
T 3hyw_A 206 VEDLFAERNIDWIANVAVKAI--EPDKVI---YED----------LNGNTHEVPAKFTMFMPSFQGP------EVVASAG 264 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEE--CSSEEE---EEC----------TTSCEEEEECSEEEEECEEECC------HHHHTTC
T ss_pred HHHHHHhCCeEEEeCceEEEE--eCCceE---EEe----------eCCCceEeecceEEEeccCCCc------hHHHhcc
Confidence 444445789999999999987 344432 210 1224578999999999995442 2222222
Q ss_pred CcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCC----CCCccceEE-EehHHHHHHHHHHhCCC
Q 018188 258 MIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPR----MGPTFGAMM-ISGQKAAHLALKALGQP 329 (359)
Q Consensus 258 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~----~~~~~g~~l-~sG~~~~~l~l~~~~~~ 329 (359)
.....+....+..+ + ++-..-.|++|..|+.+.+-..... ..|..|.+- ..|+.+++.+++.+...
T Consensus 265 ~~l~~~~~g~i~vd--~----~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 265 DKVANPANKMVIVN--R----CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp TTTBCTTTCCBCCC--T----TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccCCceEEEec--c----cccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 20000100001111 1 1111235899999876654321111 112222211 45788888888887543
No 299
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.95 E-value=0.0041 Score=57.66 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|||+|..|+.+|..|++. + +|+++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 5899999999999999999998 7 799998873
No 300
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.89 E-value=0.0095 Score=57.59 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=63.2
Q ss_pred HHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHHhc--C
Q 018188 180 KLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSI--G 257 (359)
Q Consensus 180 ~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~~~--g 257 (359)
+.+++.||+++++++|+++. ++.+ .... . .++..++.+|.||+|+|..+. . .+..+ |
T Consensus 208 ~~l~~~GV~i~~~~~v~~v~--~~~v---~~~~----~------~~~g~~i~~D~vv~a~G~~~~---~---~l~~~~~g 266 (430)
T 3h28_A 208 DLFAERNIDWIANVAVKAIE--PDKV---IYED----L------NGNTHEVPAKFTMFMPSFQGP---E---VVASAGDK 266 (430)
T ss_dssp HHHHHTTCEEECSCEEEEEC--SSEE---EEEC----T------TSCEEEEECSEEEEECEEECC---H---HHHTTCTT
T ss_pred HHHHHCCCEEEeCCEEEEEe--CCeE---EEEe----c------CCCceEEeeeEEEECCCCccc---h---hHhhcccc
Confidence 33357899999999999884 3332 2221 0 113478999999999995432 1 22322 2
Q ss_pred CcccccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCC----CCccceE-EEehHHHHHHHHHHhCCC
Q 018188 258 MIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRM----GPTFGAM-MISGQKAAHLALKALGQP 329 (359)
Q Consensus 258 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~----~~~~g~~-l~sG~~~~~l~l~~~~~~ 329 (359)
+... .+ ..+.++ +. +-..-.|++|..|+.+......... .|..+.. ...|+.+++.+++.+...
T Consensus 267 l~~~-~G-~~i~Vd--~~----l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 267 VANP-AN-KMVIVN--RC----FQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp TBCT-TT-CCBCCC--TT----SBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCC-CC-CEEecC--cc----ccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 2110 01 012222 11 1111358999998765433110000 1112211 256788888888888543
No 301
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.81 E-value=0.023 Score=54.30 Aligned_cols=114 Identities=16% Similarity=0.176 Sum_probs=61.7
Q ss_pred HHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHH
Q 018188 175 STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLK 254 (359)
Q Consensus 175 ~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~ 254 (359)
+.+.+.+ ++.||+++++++|+++. .+. |... ++.++.+|.||+|+|..+. ..+.
T Consensus 222 ~~~~~~l-~~~gV~~~~~~~v~~i~--~~~---v~~~--------------~g~~~~~D~vi~a~G~~~~------~~l~ 275 (409)
T 3h8l_A 222 KAVASIY-NQLGIKLVHNFKIKEIR--EHE---IVDE--------------KGNTIPADITILLPPYTGN------PALK 275 (409)
T ss_dssp HHHHHHH-HHHTCEEECSCCEEEEC--SSE---EEET--------------TSCEEECSEEEEECCEECC------HHHH
T ss_pred HHHHHHH-HHCCCEEEcCCceEEEC--CCe---EEEC--------------CCCEEeeeEEEECCCCCcc------HHHH
Confidence 3333333 46799999999998884 333 3343 2367999999999995442 1233
Q ss_pred hcCCccccccccc-ccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccce-EEEehHHHHHHHHHHhCC
Q 018188 255 SIGMIDSVPGMKA-LDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGA-MMISGQKAAHLALKALGQ 328 (359)
Q Consensus 255 ~~g~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~-~l~sG~~~~~l~l~~~~~ 328 (359)
..+. .+....+ +.++ +.. -..-.|++|..|..... + .+..+. ....|..+++.+...++.
T Consensus 276 ~~~~--~l~~~~G~i~vd--~~~----~~~~~~~vfa~GD~~~~--~----~~~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 276 NSTP--DLVDDGGFIPTD--LNM----VSIKYDNVYAVGDANSM--T----VPKLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp TSCG--GGSCTTSCBCBB--TTS----BBSSCTTEEECGGGBTT--C----CSCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred hccc--cCcCCCCCEEeC--ccc----ccCCCCCEEEeehhccC--C----CCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 3211 0011111 2222 111 01135889988764432 1 111211 225678888888888843
No 302
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.84 E-value=0.027 Score=46.23 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|+|+|..|..+|..|.+. |.+|+++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 5799999999999999999999 99999999875
No 303
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.79 E-value=0.027 Score=45.25 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|+|+|..|...|..|.++ |.+|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3699999999999999999999 99999999874
No 304
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.73 E-value=0.18 Score=50.12 Aligned_cols=35 Identities=23% Similarity=0.454 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
...|+|||+|..|+..|..|++. +.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCc
Confidence 35799999999999999999998 999999998753
No 305
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.72 E-value=0.036 Score=44.75 Aligned_cols=33 Identities=24% Similarity=0.379 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|.|..|...|..|.+. |.+|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 4799999999999999999999 99999999975
No 306
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.59 E-value=0.12 Score=51.00 Aligned_cols=34 Identities=21% Similarity=0.435 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~ 125 (359)
..|+|||+|.+|..++..|++. ++.+|.++-|..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 4799999999999999999863 378999998875
No 307
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.53 E-value=0.038 Score=43.85 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|+|+|..|...|..|.+. |.+|+++|+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 3699999999999999999999 99999999864
No 308
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.38 E-value=0.046 Score=44.64 Aligned_cols=32 Identities=16% Similarity=0.313 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
..|+|+|+|..|...|..|.+. |.+|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 4799999999999999999999 9999999986
No 309
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.76 E-value=0.066 Score=41.00 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC-CeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPS-IRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G-~~V~vlEk~~ 125 (359)
..|+|+|+|..|..++..|.+. | .+|+++++..
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 4699999999999999999999 8 8999999864
No 310
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.76 E-value=0.055 Score=43.05 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|+|+|..|...|..|.+. |.+|+++++..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3699999999999999999999 99999999863
No 311
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.50 E-value=0.11 Score=50.64 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|.|||.|.+|+++|..|.++ |.+|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 35799999999999999999999 99999999854
No 312
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.45 E-value=0.21 Score=48.40 Aligned_cols=58 Identities=12% Similarity=0.084 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEe--CCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...+.+.|.+.+. +.|++++++++|++|..+ ++++.+|.+. ..++.||.||+|+|.++
T Consensus 241 ~~~l~~al~~~~~-~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~---------------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 241 LGELPQGFARLSA-IYGGTYMLDTPIDEVLYKKDTGKFEGVKTK---------------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp TTHHHHHHHHHHH-HTTCEEECSCCCCEEEEETTTTEEEEEEET---------------TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHH-HcCCEEECCCEEEEEEEECCCCeEEEEEEC---------------CeEEECCEEEECCCccc
Confidence 3466777776664 679999999999999988 8888887663 36799999999999653
No 313
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.18 E-value=0.12 Score=48.37 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|.|||+|..|..+|..|++. |. +|+++|...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 5799999999999999999998 87 999999874
No 314
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.17 E-value=0.12 Score=45.42 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=30.9
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeec
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
....|+|||||..|...+..|.+. |.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 346899999999999999999999 9999999865
No 315
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=92.01 E-value=0.14 Score=49.39 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
...+.+.|.+.+. +.|++|+++++|++|..+++++.+|... +.+++||.||+|+|...
T Consensus 233 ~~~l~~~l~~~~~-~~G~~i~~~~~V~~I~~~~~~v~~v~~~---------------g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 233 LGELPQGFARLSA-IYGGTYMLNKPVDDIIMENGKVVGVKSE---------------GEVARCKQLICDPSYVP 290 (433)
T ss_dssp TTHHHHHHHHHHH-HHTCCCBCSCCCCEEEEETTEEEEEEET---------------TEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHH-HcCCEEECCCEEEEEEEeCCEEEEEEEC---------------CeEEECCEEEECCCCCc
Confidence 3466677766654 5799999999999999988888877652 46799999999999654
No 316
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.84 E-value=0.12 Score=48.17 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|.|||+|..|...|..++.. |++|+|+|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 4699999999999999999999 99999999764
No 317
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.71 E-value=0.12 Score=44.92 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|+|+|+|..|...|..|.+. |.+|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 489999999999999999999 99999999865
No 318
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.23 E-value=0.25 Score=48.24 Aligned_cols=97 Identities=10% Similarity=0.169 Sum_probs=72.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCCCCCcccCCcceeehhcchhHHHHHHHcCCcceecCCeEEEechH
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAQRFLDELGVEYDEQDNYVVIKHAA 171 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~GG~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 171 (359)
.+++|||+|..|+..|..|++. |.+|+++++.+.+.. .+ ..
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~---------------------------~~-----------~~ 232 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGDLILR---------------------------NF-----------DY 232 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSST---------------------------TS-----------CH
T ss_pred CcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCCcccc---------------------------cc-----------CH
Confidence 5899999999999999999999 999999999865310 00 01
Q ss_pred HHHHHHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 172 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 172 ~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
.+...+.+.+ ++.|++++++++|.++..+++++ .+... +..++.+|.||+|+|...
T Consensus 233 ~~~~~l~~~l-~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~--------------~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 233 DLRQLLNDAM-VAKGISIIYEATVSQVQSTENCY-NVVLT--------------NGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHH-HHHTCEEESSCCEEEEEECSSSE-EEEET--------------TSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHH-HHCCCEEEeCCEEEEEEeeCCEE-EEEEC--------------CCcEEEcCEEEEeeCCCc
Confidence 2234444444 46799999999999998776655 34443 235799999999999543
No 319
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.19 E-value=0.14 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.598 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||||-.|...+..|.+. |.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 35799999999999999999999 99999999864
No 320
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.50 E-value=0.22 Score=45.98 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 3699999999999999999999 99999999864
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.39 E-value=0.24 Score=47.48 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 46899999999999999999989 99999999875
No 322
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.29 E-value=0.19 Score=44.86 Aligned_cols=33 Identities=15% Similarity=0.452 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|+|||+|..|..+|..|++. |. +++|+|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 6899999999999999999999 87 899999875
No 323
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.00 E-value=0.27 Score=44.53 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|+++|+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 3699999999999999999999 99999999875
No 324
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.85 E-value=0.23 Score=46.15 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|+++ |++|+++|+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999999 99999999875
No 325
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.84 E-value=0.39 Score=47.15 Aligned_cols=55 Identities=9% Similarity=0.140 Sum_probs=37.3
Q ss_pred CCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHHhcCC
Q 018188 184 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGM 258 (359)
Q Consensus 184 ~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~~~g~ 258 (359)
+.|+++++++.|.++..+ +++.++... +..++.+|.||+|+|-.. ....+...|+
T Consensus 269 ~~GV~v~~~~~v~~i~~~-~~v~~v~~~--------------~g~~i~aD~Vv~a~G~~p-----~~~l~~~~g~ 323 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGN-EKVERVIDM--------------NNHEYKVDALIFADGRRP-----DINPITQAGG 323 (493)
T ss_dssp HHTCEEEECSSEEEEECS-SSCCEEEET--------------TCCEEECSEEEECCCEEE-----CCHHHHHTTC
T ss_pred hCCcEEEeCCeeEEEecC-CceEEEEeC--------------CCeEEEeCEEEECCCcCc-----CchHHHhcCC
Confidence 468999999999998644 344445442 236799999999999543 2234555554
No 326
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.82 E-value=0.27 Score=44.93 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. |.+|+++|+..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 327
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.73 E-value=0.2 Score=40.32 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|||+|..|...|..|.+. |.+|+++++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 5799999999999999999888 89999998864
No 328
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.62 E-value=0.24 Score=45.60 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 3699999999999999999999 99999999864
No 329
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.61 E-value=0.25 Score=47.05 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
.+..|||+|+|.+|+.+|..|... |. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 457899999999999999999888 88 999999975
No 330
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=89.55 E-value=0.47 Score=46.73 Aligned_cols=59 Identities=12% Similarity=0.119 Sum_probs=41.1
Q ss_pred HHHHHhCCCcEEEcceeeeeEEEeC-C-EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 178 MSKLLARPNVKLFNAVAAEDLIVKG-G-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 178 ~~~~~~~~gv~i~~~~~V~~l~~~~-~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+..+.++.|++|++++.|++|+.++ + +++||.... .++ ..+...+++|+.||+|+|+++
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~------~~g-~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD------TDG-KLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC------TTC-CEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC------CCC-ccceeEEEeeCEEEEccCCCC
Confidence 4444445679999999999999874 3 789987731 000 000135789999999999653
No 331
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=89.40 E-value=0.58 Score=46.12 Aligned_cols=59 Identities=10% Similarity=0.045 Sum_probs=41.4
Q ss_pred HHHHHhCCCcEEEcceeeeeEEEeC-C-EEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCC
Q 018188 178 MSKLLARPNVKLFNAVAAEDLIVKG-G-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDG 243 (359)
Q Consensus 178 ~~~~~~~~gv~i~~~~~V~~l~~~~-~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s 243 (359)
+..+.+..|++|++++.|++|+.++ + +++||.... .++. .+...+++|+.||+|+|+.+
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~------~~g~-~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID------EQGN-VVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC------TTSC-EEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC------CCCc-ccccEEEEeCEEEEccCccC
Confidence 4444456679999999999999876 4 789988741 0000 00135789999999999653
No 332
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.39 E-value=0.33 Score=45.17 Aligned_cols=33 Identities=18% Similarity=0.384 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|+.. |. +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 4799999999999999999998 88 999999864
No 333
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.27 E-value=0.33 Score=45.73 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|+|+|.+|..++..|... |.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 5799999999999999999999 99999999874
No 334
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.17 E-value=0.33 Score=45.08 Aligned_cols=32 Identities=19% Similarity=0.358 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
..|.|||+|..|...|..|++. |.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 3699999999999999999999 9999999985
No 335
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.05 E-value=0.27 Score=46.72 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 46899999999999999999888 99999999875
No 336
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.96 E-value=0.23 Score=41.63 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|.|..|...|..|.+..|.+|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999763168999999874
No 337
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=88.91 E-value=0.26 Score=47.67 Aligned_cols=35 Identities=23% Similarity=0.588 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSP 127 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~ 127 (359)
..|+|||.|.+|+++|..|.++ |.+|++.|.....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCCc
Confidence 3699999999999999999999 9999999987644
No 338
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.90 E-value=0.26 Score=48.20 Aligned_cols=32 Identities=22% Similarity=0.447 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|+|+|+|-.|...|..|.+. |.+|+|||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 699999999999999999999 99999999875
No 339
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.86 E-value=0.33 Score=46.48 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||+|.+|+.++..|... |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35799999999999999999888 99999999874
No 340
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.66 E-value=0.36 Score=44.31 Aligned_cols=33 Identities=24% Similarity=0.503 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|+|||+|..|...|..|++. |. +|+++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 3699999999999999999998 88 999999864
No 341
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.52 E-value=0.39 Score=43.08 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.|.|||+|..|...|..|++. |.+|+++++...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCcc
Confidence 489999999999999999999 999999998753
No 342
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.39 E-value=0.38 Score=45.73 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|+|+|.+|+.++..|... |.+|+++++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 46899999999999999999888 99999999875
No 343
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.27 E-value=0.49 Score=43.78 Aligned_cols=32 Identities=25% Similarity=0.550 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~ 124 (359)
..|.|||+|..|..+|+.|+.. |. .|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 5799999999999999999998 88 99999987
No 344
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.19 E-value=0.36 Score=45.88 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=31.9
Q ss_pred cCcccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 89 YADTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 89 ~~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..+..|+|+|+|.+|..+|..|... |. +|+++|+..
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 3457899999999999999999988 88 799999974
No 345
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.00 E-value=0.42 Score=45.99 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|||.|..|...|..|.+. |.+|++||+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 4699999999999999999999 99999999875
No 346
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=87.96 E-value=0.75 Score=42.54 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHH-HHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLS-CAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~-aA~~La~~~G~~V~vlEk~~~ 126 (359)
..|.|||.|.+|++ +|..|.++ |.+|.+.|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCCC
Confidence 36899999999996 78888899 999999998753
No 347
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.86 E-value=0.47 Score=44.82 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|+|+|..|..+|..|... |.+|+++++..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 35799999999999999999999 99999999864
No 348
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.73 E-value=0.5 Score=40.71 Aligned_cols=34 Identities=12% Similarity=0.216 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
..|.|||+|..|...|..|++. |.+|+++++...
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 4699999999999999999999 999999988753
No 349
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.72 E-value=0.46 Score=44.14 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3699999999999999999999 99999999853
No 350
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.60 E-value=0.31 Score=44.40 Aligned_cols=32 Identities=25% Similarity=0.551 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. |.+|++++|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 699999999999999999998 89999999874
No 351
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.56 E-value=0.47 Score=42.85 Aligned_cols=32 Identities=28% Similarity=0.415 Sum_probs=29.5
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+ |..|...|..|.+. |.+|+++++..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 6999999 99999999999999 99999998764
No 352
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.56 E-value=0.47 Score=43.04 Aligned_cols=32 Identities=22% Similarity=0.371 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. |.+|+++++..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 699999999999999999999 99999998854
No 353
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.50 E-value=0.47 Score=46.53 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|.|||.|..|+..|..|++. |.+|+++++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 35799999999999999999999 99999999864
No 354
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.38 E-value=0.5 Score=42.53 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..++|+|+|.+|..+|..|++. |.+|+++.|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 5799999999999999999999 89999998763
No 355
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.31 E-value=0.46 Score=43.78 Aligned_cols=33 Identities=24% Similarity=0.525 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |. +|+++|+..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 4699999999999999999998 88 999999864
No 356
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.18 E-value=0.52 Score=44.36 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|+++ |.+|.++++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 357
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.16 E-value=0.57 Score=43.19 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC-CeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPS-IRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G-~~V~vlEk~~ 125 (359)
..|.|||.|..|...|..|++. | .+|+++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 4699999999999999999999 9 9999999875
No 358
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.13 E-value=0.51 Score=43.29 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
.|+|||+|..|...|+.|+.. |. .|.++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 489999999999999999998 88 899999764
No 359
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.08 E-value=0.57 Score=43.76 Aligned_cols=33 Identities=21% Similarity=0.479 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.|+|+|||..|..+++.+.+. |++|+++|..+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 589999999999999999999 999999997653
No 360
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=86.91 E-value=0.53 Score=43.10 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=30.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.+..|.|||+|..|...|..|+ . |++|+++|+..
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 3468999999999999999999 8 99999999875
No 361
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.89 E-value=0.57 Score=42.94 Aligned_cols=32 Identities=31% Similarity=0.573 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|+ . |.+|+++.|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 36999999999999999999 8 99999999864
No 362
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.77 E-value=0.58 Score=44.32 Aligned_cols=34 Identities=29% Similarity=0.529 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|... |.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM-GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 35799999999999999999888 99999999764
No 363
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.56 E-value=0.56 Score=45.64 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||.|..|+..|..|++. |.+|+++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 699999999999999999999 99999999864
No 364
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.54 E-value=4.9 Score=37.59 Aligned_cols=112 Identities=14% Similarity=0.113 Sum_probs=63.4
Q ss_pred HhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCCCCCCCchHHHHHHhcCCccc
Q 018188 182 LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDS 261 (359)
Q Consensus 182 ~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg~s~~~~~g~~~~~~~g~~~~ 261 (359)
.++.|++++.++++..+..+++.. .+... ++.++.+|.||+++|...+ ..+...|+...
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~-~v~~~--------------~g~~i~~D~vi~~~g~~~~------~~~~~~gl~~~ 270 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAM-TVETS--------------FGETFKAAVINLIPPQRAG------KIAQSASLTND 270 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTT-EEEET--------------TSCEEECSEEEECCCEEEC------HHHHHTTCCCT
T ss_pred HHhcCcEEEeCceEEEEEecccce-EEEcC--------------CCcEEEeeEEEEecCcCCc------hhHhhcccccc
Confidence 357899999999998887665432 23332 3478999999999984331 23444444211
Q ss_pred ccccccccccchhhHHhhhccccCCCeeEeceEEEeecCCCCCCCccce-EEEehHHHHHHHHHHhC
Q 018188 262 VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGA-MMISGQKAAHLALKALG 327 (359)
Q Consensus 262 ~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~g~~~~~~~~g~-~l~sG~~~~~l~l~~~~ 327 (359)
.+ .+.++ +.. +...-.|++|..|+.+... + .|..+. ..-.|+.+++.++..+.
T Consensus 271 -~G--~i~VD--~~t---l~~t~~p~VfAiGDva~~~---~--~pk~a~~A~~qa~v~A~ni~~~l~ 324 (401)
T 3vrd_B 271 -SG--WCPVD--IRT---FESSLQPGIHVIGDACNAA---P--MPKSAYSANSQAKVAAAAVVALLK 324 (401)
T ss_dssp -TS--SBCBC--TTT---CBBSSSTTEEECGGGBCCT---T--SCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CC--CEEEC--CCc---ceecCCCCEEEecccccCC---C--CCchHHHHHHHHHHHHHHHHHHhc
Confidence 11 12222 110 1123458999998754211 1 111221 12557888888888873
No 365
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.21 E-value=0.6 Score=45.55 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. |.+|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 366
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.17 E-value=0.63 Score=43.07 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
+..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 46899999999999999999999 99999998853
No 367
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.07 E-value=0.4 Score=41.83 Aligned_cols=32 Identities=19% Similarity=0.419 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..++|+|+|..|...|..|.+. |. |+++|+++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 4699999999999999999998 89 99999875
No 368
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.89 E-value=0.75 Score=42.61 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|.|||+|..|..+|..|+.. |. +|+++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 3699999999999999999998 87 999999764
No 369
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.80 E-value=0.73 Score=42.16 Aligned_cols=33 Identities=39% Similarity=0.433 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||.|..|...|..|.+. |.+|++.++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 5799999999999999999999 99999999875
No 370
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=85.78 E-value=0.73 Score=44.79 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
...+.|||.|..|+..|..|++. |.+|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 46899999999999999999999 999999998763
No 371
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.77 E-value=0.58 Score=45.66 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
..|.|||+|..|...|..|++. |.+|+++|+...
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 3699999999999999999999 999999998754
No 372
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=85.76 E-value=0.58 Score=43.24 Aligned_cols=32 Identities=31% Similarity=0.644 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~ 124 (359)
..|+|||+|..|..+|+.|+.. +. .+.++|..
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~-~~~~ei~L~Di~ 40 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ-SIVDELVIIDLD 40 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CSCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCC
Confidence 5899999999999999999987 64 79999864
No 373
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=85.75 E-value=1.6 Score=41.07 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
..|.|||+|..|...+..+.+. |++|++++..+.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~l-G~~viv~d~~~~ 46 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKM-GYKVVVLDPSED 46 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 5799999999999999999999 999999987653
No 374
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.68 E-value=0.59 Score=45.85 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|+|+|..|..+|..|+.. |.+|++.|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35799999999999999999999 99999998764
No 375
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=85.49 E-value=0.79 Score=41.39 Aligned_cols=35 Identities=23% Similarity=0.507 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
...++|||+|.+|-++++.|.+. |.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 45799999999999999999999 899999988753
No 376
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.44 E-value=0.64 Score=42.79 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|+++ +..
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA-GHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHHC-CCeEEEE-EcH
Confidence 4699999999999999999999 9999999 543
No 377
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.43 E-value=0.66 Score=41.34 Aligned_cols=34 Identities=18% Similarity=0.467 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|++. |+ +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 36899999999999999999999 87 688988764
No 378
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.23 E-value=0.82 Score=42.45 Aligned_cols=33 Identities=15% Similarity=0.286 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|.|||+|..|..+|+.|+.. |. .|.++|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 4799999999999999999998 88 999999865
No 379
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.22 E-value=0.78 Score=41.94 Aligned_cols=34 Identities=18% Similarity=0.468 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|.+|..+|..|.+. |. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST-AAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 35799999999999999999999 87 899998863
No 380
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.63 E-value=0.89 Score=42.00 Aligned_cols=33 Identities=24% Similarity=0.470 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|+|||+|..|..+|+.|+.. +. .+.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 5799999999999999999998 77 899999764
No 381
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.49 E-value=0.72 Score=44.94 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||+|.+|...+..|.+. |.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA-GARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCCC
Confidence 35799999999999999999999 99999999753
No 382
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.49 E-value=1 Score=38.35 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=29.0
Q ss_pred cEEEEC-CChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVG-AGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIG-gG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.||| +|..|...|..|.+. |.+|.++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999 999999999999999 99999998864
No 383
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.48 E-value=0.66 Score=41.77 Aligned_cols=33 Identities=15% Similarity=0.356 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..++|+|+|.+|..+|..|++. |.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 5799999999999999999999 89999998874
No 384
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=84.37 E-value=0.95 Score=41.83 Aligned_cols=33 Identities=15% Similarity=0.404 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQS 124 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~ 124 (359)
...++|+|+|.+|.++|+.|++. |. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 35799999999999999999999 98 89999887
No 385
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=84.22 E-value=0.85 Score=41.31 Aligned_cols=31 Identities=26% Similarity=0.638 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
..++|+|+|.+|.++|..|++. | +|+++.|.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 4699999999999999999999 9 99999876
No 386
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.21 E-value=1 Score=41.77 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|.|||+|..|..+|+.|+.. ++ .+.++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 4699999999999999999988 77 999999764
No 387
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=84.12 E-value=1.1 Score=39.59 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||.|..|...|..|++. |.+|++.++..
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 5799999999999999999999 99999999874
No 388
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.02 E-value=0.96 Score=41.55 Aligned_cols=33 Identities=15% Similarity=0.366 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|.|||+|..|...|+.|+.. |. +|.++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 3699999999999999999998 76 899999754
No 389
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=83.93 E-value=0.73 Score=44.48 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|+..|..|++. |.+|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 489999999999999999999 99999999864
No 390
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.92 E-value=0.96 Score=42.27 Aligned_cols=34 Identities=18% Similarity=0.474 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|+.. |+ +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 46899999999999999999999 86 688888765
No 391
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=83.90 E-value=0.5 Score=41.03 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEE-Eeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAI-IEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~v-lEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|++ .+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 3699999999999999999999 999988 77654
No 392
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=83.85 E-value=1.1 Score=38.76 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|.+. |.+|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999998 99999998864
No 393
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.83 E-value=0.8 Score=42.20 Aligned_cols=33 Identities=18% Similarity=0.395 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||.|..|...|..|++. |.+|+++++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 4799999999999999999999 99999999874
No 394
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.79 E-value=0.88 Score=41.46 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||.|..|...|..|++. |.+|+++++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 4799999999999999999999 99999999864
No 395
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=83.70 E-value=0.78 Score=41.96 Aligned_cols=34 Identities=21% Similarity=0.370 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|++. |+ +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46899999999999999999998 75 788998764
No 396
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=83.57 E-value=0.98 Score=41.03 Aligned_cols=34 Identities=24% Similarity=0.498 Sum_probs=30.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...++|+|+|.+|.+++..|++. |. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECCH
Confidence 45799999999999999999999 88 699998763
No 397
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.56 E-value=0.97 Score=40.75 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.|.|||.|..|...|..|++. |.+|++.++...
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCHH
Confidence 589999999999999999999 999999998753
No 398
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.53 E-value=0.92 Score=41.21 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
..|.|||.|..|...|..|++. |.+|+++++...
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4799999999999999999999 999999998764
No 399
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=83.49 E-value=1.3 Score=39.54 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.|+|.|+|..|...+..|.++ |.+|+++.+...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 699999999999999999999 999999998753
No 400
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=83.42 E-value=0.93 Score=41.81 Aligned_cols=33 Identities=27% Similarity=0.583 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|.|||+|..|...|+.|+.. +. .+.++|...
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-GIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCCEEEEEeCCc
Confidence 4799999999999999999886 64 799999754
No 401
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=83.31 E-value=0.99 Score=41.32 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
..|.|||.|..|...|..|++. |.+|+++++...
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4699999999999999999999 999999998753
No 402
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.30 E-value=0.84 Score=44.29 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..+.|||.|..||.+|..+++. |.+|+.+|-+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 5799999999999999999999 99999999764
No 403
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=83.28 E-value=0.89 Score=44.57 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~~ 126 (359)
..|.|||+|..|+..|..|++.+|. +|+++++...
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3699999999999999999987678 9999998865
No 404
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=83.25 E-value=0.88 Score=42.27 Aligned_cols=32 Identities=34% Similarity=0.596 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~ 124 (359)
..|.|||+|..|..+|+.|+.. +. .+.++|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 5799999999999999999987 66 89999974
No 405
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.24 E-value=0.81 Score=41.98 Aligned_cols=30 Identities=27% Similarity=0.341 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEee
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQ 123 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk 123 (359)
.|.|||+|..|...|..|++. |.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 489999999999999999998 999999998
No 406
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=83.10 E-value=1.1 Score=41.23 Aligned_cols=33 Identities=18% Similarity=0.495 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKN-PSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~-~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. .|.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 489999999999999999884 168999999874
No 407
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.97 E-value=0.96 Score=42.02 Aligned_cols=33 Identities=27% Similarity=0.524 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|.|||+|..|..+|+.|+.. |. .++++|...
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-GITDELVVIDVNK 40 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEecch
Confidence 4699999999999999999987 76 899999743
No 408
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=82.90 E-value=0.93 Score=41.09 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...++|+|+|.+|..+|..|.+. |. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 35799999999999999999999 88 899998874
No 409
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=82.85 E-value=0.92 Score=42.43 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. |.+|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 699999999999999999999 99999998763
No 410
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=82.80 E-value=2.6 Score=42.91 Aligned_cols=56 Identities=9% Similarity=-0.041 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHhCCCcEEEcceeeeeEEEeC--CEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCC
Q 018188 170 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCG 240 (359)
Q Consensus 170 ~~~~~~~L~~~~~~~~gv~i~~~~~V~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtG 240 (359)
...+.+.|.+.+ +..|++|++++.|.+|..++ +++.||... ++.+++||.||....
T Consensus 377 ~g~L~qaL~r~~-~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~--------------~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMC-AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQ--------------FGQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHH-HHTTCEEESSCCEEEEEEETTTCCEEEEEET--------------TSCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHH-HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeC--------------CCCEEEcCEEEEChh
Confidence 345566665555 47899999999999999887 789888753 247799999987444
No 411
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=82.72 E-value=1.2 Score=39.70 Aligned_cols=32 Identities=25% Similarity=0.556 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
.++|||+|.+|-++++.|.+. |. +|.|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 799999999999999999998 88 899998874
No 412
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=82.67 E-value=1.1 Score=44.04 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3699999999999999999999 99999999875
No 413
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=82.63 E-value=0.86 Score=42.04 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. |. +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 489999999999999999998 88 999999764
No 414
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.61 E-value=1.3 Score=38.19 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=30.2
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|.|| |..|..++..|.++ |.+|+++.|..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 46999998 99999999999999 99999999875
No 415
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.59 E-value=1 Score=39.91 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=29.1
Q ss_pred ccEEEECC-C-hHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-G-SAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G-~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.|| | ..|..+|..|+++ |.+|+++.+..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 45899999 7 5999999999999 99999998764
No 416
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=82.57 E-value=1.2 Score=40.36 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|.|||.|..|..+|..|... |.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 45799999999999999999988 99999999863
No 417
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.47 E-value=1.4 Score=40.28 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 418
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=82.38 E-value=1.2 Score=40.95 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|.|||.|..|.+.|..|.+. |. +|+++++..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 4799999999999999999999 88 999999864
No 419
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=82.30 E-value=1.3 Score=40.09 Aligned_cols=32 Identities=16% Similarity=0.351 Sum_probs=29.4
Q ss_pred ccEEEEC-CChHHHHHHHHhhcCCCCeEEEEeec
Q 018188 92 TDVIVVG-AGSAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIG-gG~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
..++|+| +|.+|..+|..|++. |.+|+++.|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 5699999 899999999999999 9999999876
No 420
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.29 E-value=1.3 Score=40.38 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|.|||.|..|..+|..|... |.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 45799999999999999999988 99999999863
No 421
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.24 E-value=1.4 Score=37.25 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=29.1
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|+|.|| |..|..++..|.++ |.+|+++.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 3899996 99999999999999 99999999874
No 422
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=82.22 E-value=1.4 Score=40.63 Aligned_cols=33 Identities=15% Similarity=0.395 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQS 124 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~ 124 (359)
...++|+|+|.+|-++++.|++. |. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 35799999999999999999999 88 79999887
No 423
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=82.03 E-value=1.2 Score=40.45 Aligned_cols=34 Identities=15% Similarity=0.286 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...++|+|+|.+|-++++.|.+. |. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 45799999999999999999999 88 899998764
No 424
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=82.02 E-value=1.5 Score=42.44 Aligned_cols=40 Identities=25% Similarity=0.263 Sum_probs=32.4
Q ss_pred CcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCC
Q 018188 186 NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCG 240 (359)
Q Consensus 186 gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtG 240 (359)
|++|+++++|++|..+++++. |.+. ++.+++||.||+|++
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~-v~~~--------------~g~~~~ad~vI~a~~ 267 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVT-VKTE--------------DNSVYSADYVMVSAS 267 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEE-EEET--------------TSCEEEESEEEECSC
T ss_pred ccEEEcCCEEEEEEEcCCcEE-EEEC--------------CCCEEEcCEEEEecC
Confidence 678999999999998877665 5443 235799999999998
No 425
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.99 E-value=1.5 Score=39.68 Aligned_cols=34 Identities=12% Similarity=0.338 Sum_probs=30.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...++|+|+|.+|..++..|++. |. +|.|+.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ-QPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhc-CCCeEEEEECCH
Confidence 45799999999999999999999 96 899998863
No 426
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=81.93 E-value=1.2 Score=44.26 Aligned_cols=35 Identities=20% Similarity=0.462 Sum_probs=32.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeeccCC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVSP 127 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~~ 127 (359)
-.++|||+|..|...|..|.+. |.+|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChHH
Confidence 5799999999999999999999 9999999998753
No 427
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.84 E-value=1.4 Score=39.16 Aligned_cols=32 Identities=9% Similarity=0.160 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|+|.|+|..|...+..|.++ |.+|+++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 699999999999999999999 99999999875
No 428
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=81.83 E-value=1.7 Score=36.31 Aligned_cols=32 Identities=19% Similarity=0.426 Sum_probs=29.6
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|+|.|| |..|..++..|.++ |.+|+++.|..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 5999998 99999999999999 99999999875
No 429
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=81.77 E-value=1.2 Score=43.52 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
+.+|.|||.|..|...|..|+++ |.+|++.++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 36899999999999999999999 99999999864
No 430
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=81.72 E-value=1.5 Score=42.10 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|+|+|..|...+..+.+. |++|++++..+
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d~~~ 68 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSM-GYRVAVLDPDP 68 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 35799999999999999999999 99999998653
No 431
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=81.51 E-value=1.4 Score=42.58 Aligned_cols=33 Identities=21% Similarity=0.517 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC---eEEEEe----ec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI---RVAIIE----QS 124 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~---~V~vlE----k~ 124 (359)
+..|+|+|+|.+|.++|..|.+. |. +|.|++ |.
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEA-GVKPENVRVVELVNGKP 225 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEEEETTEE
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCcCeEEEEEccCCCc
Confidence 46799999999999999999999 97 799999 76
No 432
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=81.49 E-value=1.1 Score=44.09 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||.|..|..+|..|... |.+|+++|+..
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35799999999999999999888 99999999864
No 433
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=81.45 E-value=1.4 Score=39.69 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...++|+|+|.+|.++++.|++. |. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-GPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 35799999999999999999999 96 899998763
No 434
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.34 E-value=1.5 Score=37.24 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=29.2
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|+|.|| |..|...+..|.++ |.+|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 3899998 99999999999999 99999998864
No 435
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.32 E-value=1.3 Score=39.45 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|.+. |.+|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 489999999999999999998 99999998764
No 436
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=81.30 E-value=1.2 Score=43.02 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|+|||.|..|..+|..|... |.+|++.|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 45799999999999999999888 99999999764
No 437
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.30 E-value=1.6 Score=39.54 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=28.9
Q ss_pred ccEEEECCC---hHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAG---SAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG---~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.||+ ..|..+|..|+++ |.+|+++.+..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~ 66 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSE 66 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 458999985 7899999999999 99999998864
No 438
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=81.07 E-value=1.1 Score=43.92 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCC-CCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNP-SIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~-G~~V~vlEk~~ 125 (359)
..|.|||.|..|+..|..|++.. |.+|+++++..
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36999999999999999999862 58999999754
No 439
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.06 E-value=1.4 Score=40.71 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|+|+.|+.++..|++..|.+|+.++..+
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~ 198 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ 198 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH
Confidence 4699999999999999888765488999998763
No 440
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.01 E-value=0.98 Score=41.28 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
.|.|||+|..|.+.|+.|+.. +. ++.++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 489999999999999999988 77 899999764
No 441
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=80.91 E-value=2.3 Score=39.98 Aligned_cols=33 Identities=15% Similarity=0.370 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|||+|..|..++..+.+. |++|++++...
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCC
Confidence 4799999999999999999999 99999998764
No 442
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=80.69 E-value=1.1 Score=41.01 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCC--CeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPS--IRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G--~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. | .+|+++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 589999999999999999998 8 6899999864
No 443
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=80.69 E-value=1.1 Score=41.85 Aligned_cols=34 Identities=15% Similarity=0.324 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|++. |+ +++|+|...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 47899999999999999999999 87 789998764
No 444
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=80.67 E-value=1.1 Score=42.65 Aligned_cols=29 Identities=17% Similarity=0.338 Sum_probs=27.1
Q ss_pred cEEEECCChHHHHHHHHhhc-CCCCeEEEEe
Q 018188 93 DVIVVGAGSAGLSCAYEISK-NPSIRVAIIE 122 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~-~~G~~V~vlE 122 (359)
.|.|||+|..|...|..|++ . |.+|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 69999999999999999987 6 89999999
No 445
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=80.55 E-value=0.83 Score=42.42 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC-------CeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPS-------IRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G-------~~V~vlEk~~~ 126 (359)
..|.|||+|..|...|..|++. | .+|.++++...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 3699999999999999999998 8 89999998754
No 446
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=80.49 E-value=1.5 Score=39.93 Aligned_cols=32 Identities=19% Similarity=0.363 Sum_probs=29.6
Q ss_pred cEEEEC-CChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVG-AGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIG-gG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.||| .|..|.+.|..|++. |.+|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 699999 999999999999999 99999998764
No 447
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=80.44 E-value=1.5 Score=43.21 Aligned_cols=34 Identities=12% Similarity=0.227 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...|.|||.|..|...|..|+++ |.+|++.++..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 46899999999999999999999 99999999864
No 448
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=80.41 E-value=1.2 Score=40.89 Aligned_cols=33 Identities=33% Similarity=0.709 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|.|||+|..|...|+.++.. |. .+.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 4699999999999999999887 77 899999875
No 449
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=80.32 E-value=0.98 Score=40.70 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.|.|||.|..|...|..|++. |.+|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCHH
Confidence 589999999999999999999 999999998753
No 450
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=80.29 E-value=1.5 Score=44.01 Aligned_cols=34 Identities=18% Similarity=0.474 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|++. |+ +++|+|...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46899999999999999999999 87 689998764
No 451
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=80.16 E-value=1.2 Score=40.02 Aligned_cols=33 Identities=24% Similarity=0.495 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|+|||+|.+|...|..|.+. |.+|+++++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 5799999999999999999998 88999998763
No 452
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=80.16 E-value=1.2 Score=40.93 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeec
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~ 124 (359)
..|.|||.|..|...|..|++. |. +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 4799999999999999999999 99 99999985
No 453
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=80.15 E-value=1.4 Score=41.43 Aligned_cols=34 Identities=18% Similarity=0.490 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|++. |+ +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 46899999999999999999998 76 689999764
No 454
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.12 E-value=1.3 Score=40.12 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||.|..|...|..|++. |.+|+++++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 699999999999999999999 99999999864
No 455
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=80.04 E-value=1.5 Score=39.12 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. |. +|+++++..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCH
Confidence 489999999999999999998 88 899998764
No 456
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=79.98 E-value=2.2 Score=38.76 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=30.2
Q ss_pred CcccEEEECCC-hHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 90 ADTDVIVVGAG-SAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 90 ~~~DVvIIGgG-~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...+|+|||+| ..|..+|..|... |..|+++.+..
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t 193 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFT 193 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence 34799999999 5799999999999 99999997553
No 457
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=79.97 E-value=1.6 Score=41.07 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||.|..|...|..|++. |.+|+++++..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 458
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=79.78 E-value=1.4 Score=40.79 Aligned_cols=33 Identities=33% Similarity=0.582 Sum_probs=28.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC--eEEEEeec
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQS 124 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~ 124 (359)
...|.|||+|..|..+|+.|+.. +. .+.|+|..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-CCCCEEEEEeCC
Confidence 36799999999999999999876 54 79999874
No 459
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=79.62 E-value=1.5 Score=41.96 Aligned_cols=42 Identities=10% Similarity=-0.003 Sum_probs=32.6
Q ss_pred CCCcEEEcceeeeeEEEeCCE-EEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCC
Q 018188 184 RPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGH 241 (359)
Q Consensus 184 ~~gv~i~~~~~V~~l~~~~~~-v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg 241 (359)
..|++|+++++|++|..++++ +. |.+ +..+++||.||+|++.
T Consensus 224 ~lg~~i~~~~~V~~i~~~~~~~v~-v~~---------------~~~~~~ad~VI~a~p~ 266 (453)
T 2yg5_A 224 ALGDDVFLNAPVRTVKWNESGATV-LAD---------------GDIRVEASRVILAVPP 266 (453)
T ss_dssp HHGGGEECSCCEEEEEEETTEEEE-EET---------------TTEEEEEEEEEECSCG
T ss_pred hcCCcEEcCCceEEEEEeCCceEE-EEE---------------CCeEEEcCEEEEcCCH
Confidence 347899999999999988776 43 332 1367999999999984
No 460
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=79.45 E-value=1.7 Score=40.24 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|+|..|+.++..+... |.+|+.+++.+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4799999999999988777777 99999998764
No 461
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=79.41 E-value=1.7 Score=38.09 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=27.6
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.|| |..|..+|..|+++ |.+|+++.+..
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~ 43 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAER-GAKVIGTATSE 43 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45778886 56799999999999 99999998764
No 462
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=79.30 E-value=2 Score=39.28 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=29.8
Q ss_pred CcccEEEECCC-hHHHHHHHHhhcCCCCeEEEEeec
Q 018188 90 ADTDVIVVGAG-SAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 90 ~~~DVvIIGgG-~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
...+|+|||+| ..|..+|..|... |..|+++.+.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEECC
Confidence 34789999999 5899999999999 9999999754
No 463
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=79.22 E-value=1.4 Score=39.67 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 699999999999999999998 99999998764
No 464
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=79.15 E-value=2.2 Score=37.90 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=29.0
Q ss_pred ccEEEECC---ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA---GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg---G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.|| |..|..+|..|+++ |.+|+++.+..
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35899997 58999999999999 99999998874
No 465
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=79.06 E-value=1.6 Score=39.45 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|.+. |.+|+++++..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3699999999999999999998 99999998764
No 466
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=78.98 E-value=1.5 Score=45.27 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..+++. |.+|+++|+..
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999999 99999999874
No 467
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=78.97 E-value=1.7 Score=43.77 Aligned_cols=35 Identities=17% Similarity=0.456 Sum_probs=30.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
....|+|||+|..|+.+|..|++. |+ +++|+|...
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~ 360 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 360 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCC
Confidence 347899999999999999999999 76 688998765
No 468
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=78.91 E-value=2.1 Score=37.10 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=29.2
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 93 DVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
-|+|.|| |..|..++..|+++ |.+|+++.|...
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~~ 36 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARA-GHTVIGIDRGQA 36 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCChh
Confidence 3899988 89999999999999 999999998753
No 469
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=78.89 E-value=1.6 Score=40.42 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=30.0
Q ss_pred CcccEEEECCC-hHHHHHHHHhhcCCCCeEEEEeec
Q 018188 90 ADTDVIVVGAG-SAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 90 ~~~DVvIIGgG-~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
....|+|||+| ..|..+|..|... |.+|+++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 34689999999 5799999999999 9999999876
No 470
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=78.89 E-value=1.8 Score=38.55 Aligned_cols=32 Identities=25% Similarity=0.512 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.++|||+|..|...|..|.+. |.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 799999999999999999998 88999998763
No 471
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=78.88 E-value=2 Score=39.99 Aligned_cols=33 Identities=27% Similarity=0.620 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|.|||+|..|..+|+.|+.. |. .+.|+|...
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~~ 54 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-DLADELALVDVIE 54 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCCh
Confidence 5799999999999999999988 77 899999653
No 472
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=78.85 E-value=1.4 Score=41.01 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
..|.|||+|..|..+|+.++.. |+ .+.++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-DLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCH
Confidence 5799999999999999999988 77 899999753
No 473
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=78.82 E-value=1.3 Score=39.24 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=28.8
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.-++|.|| |..|..+|..|+++ |.+|+++.+...
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~ 63 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDR-NYRVVATSRSIK 63 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChh
Confidence 45778886 67899999999999 999999998754
No 474
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.80 E-value=1.6 Score=37.17 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=29.9
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeeccC
Q 018188 93 DVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~~ 126 (359)
.|+|.|| |..|...+..|.++ |.+|+++.|...
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 39 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPE 39 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcc
Confidence 5999996 99999999999999 999999998753
No 475
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=78.78 E-value=1.5 Score=38.78 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCC-CeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPS-IRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G-~~V~vlEk~~ 125 (359)
.|.|||+|..|...|..|++. | .+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC-CCCeEEEECCCH
Confidence 489999999999999999998 8 8999998763
No 476
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=78.72 E-value=1.5 Score=40.53 Aligned_cols=32 Identities=25% Similarity=0.508 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSI--RVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~--~V~vlEk~~ 125 (359)
.|.|||+|..|..+|+.|+.. +. .+.++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCch
Confidence 489999999999999999987 76 899999764
No 477
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=78.62 E-value=1.5 Score=38.65 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC----CeEEEEeeccC
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPS----IRVAIIEQSVS 126 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G----~~V~vlEk~~~ 126 (359)
..|.|||+|..|...|..|.+. | .+|.++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCcc
Confidence 3699999999999999999988 8 68999998754
No 478
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=78.59 E-value=1.4 Score=42.09 Aligned_cols=34 Identities=29% Similarity=0.513 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 91 DTDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 91 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
...|+|||+|..|..+|..|... |. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-CCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 35799999999999999999888 88 899998763
No 479
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=78.58 E-value=1.8 Score=40.83 Aligned_cols=34 Identities=12% Similarity=0.258 Sum_probs=30.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeec
Q 018188 90 ADTDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQS 124 (359)
Q Consensus 90 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~ 124 (359)
....|+|+|.|..|..+|..|.+. |.+|++.|+.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 346799999999999999999999 9999988754
No 480
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=78.57 E-value=1.6 Score=39.34 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.|.|||.|..|...|..|.+. |.+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999864
No 481
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=78.44 E-value=2 Score=40.19 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|+|..|+.++..+... |.+|+++++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999998888778 99999998764
No 482
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=78.42 E-value=1.5 Score=39.16 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=27.0
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~ 62 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRL 62 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 34666676 67899999999999 99999998764
No 483
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=78.22 E-value=1.9 Score=40.23 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=28.0
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCC--eEEEEeec
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSI--RVAIIEQS 124 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~--~V~vlEk~ 124 (359)
..|+|||+ |..|..+|+.+... |. .++++|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~-g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMM-RLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT-TCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhc-CCCCEEEEEeCC
Confidence 46999998 99999999999888 74 79999875
No 484
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.15 E-value=2 Score=40.21 Aligned_cols=33 Identities=24% Similarity=0.144 Sum_probs=27.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|+|+.|+.++..+... |.+|+++++.+
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSE 228 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999988777667 99999998754
No 485
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=78.07 E-value=1.4 Score=42.49 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
...-|||.|..|+..|..|++. |.+|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 5789999999999999999999 99999999875
No 486
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=77.92 E-value=1.6 Score=39.28 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..++|||+|.+|-++++.|.+. |. +|+|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT-TCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 5799999999999999999999 86 799998863
No 487
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=77.91 E-value=2.1 Score=38.59 Aligned_cols=33 Identities=15% Similarity=0.414 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC---eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI---RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~---~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|.+. |. +|.+.+++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCH
Confidence 4699999999999999999998 88 899999874
No 488
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=77.87 E-value=1.7 Score=39.90 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC----CeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPS----IRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G----~~V~vlEk~~ 125 (359)
..|.|||+|..|...|..|.+. | .+|+++++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCc
Confidence 3699999999999999999998 8 7899998764
No 489
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=77.84 E-value=2.4 Score=37.68 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=28.1
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~ 64 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAA 64 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 45888887 56799999999999 99999998864
No 490
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=77.80 E-value=2.3 Score=38.12 Aligned_cols=33 Identities=15% Similarity=0.352 Sum_probs=28.1
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~ 62 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAAD-GVTVGALGRTR 62 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45788887 56799999999999 99999998764
No 491
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=77.73 E-value=2.4 Score=36.15 Aligned_cols=32 Identities=9% Similarity=0.284 Sum_probs=28.6
Q ss_pred cEEEECC-ChHHHHHHHHhh-cCCCCeEEEEeecc
Q 018188 93 DVIVVGA-GSAGLSCAYEIS-KNPSIRVAIIEQSV 125 (359)
Q Consensus 93 DVvIIGg-G~aGl~aA~~La-~~~G~~V~vlEk~~ 125 (359)
.|+|.|| |..|..++..|+ +. |.+|+++.|..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYT-DMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 3999995 999999999999 78 99999999874
No 492
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.72 E-value=1.8 Score=40.29 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|+|+.|+.++..+... |.+|+.+++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM-GAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4699999999999988777767 99999998764
No 493
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=77.39 E-value=2.1 Score=41.39 Aligned_cols=33 Identities=21% Similarity=0.467 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSI-RVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~vlEk~~ 125 (359)
..|+|||+|..|..+|..|++. |+ +++|+|...
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-Gvg~i~ivD~D~ 74 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-GFRQIHVIDMDT 74 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-TCCCEEEEECCB
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CCCEEEEEcCCE
Confidence 6899999999999999999999 87 689998764
No 494
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=77.39 E-value=1.3 Score=41.63 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCC-------CeEEEEeeccC
Q 018188 93 DVIVVGAGSAGLSCAYEISKNPS-------IRVAIIEQSVS 126 (359)
Q Consensus 93 DVvIIGgG~aGl~aA~~La~~~G-------~~V~vlEk~~~ 126 (359)
.|.|||+|..|...|..|++. | .+|+++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 699999999999999999998 8 89999998754
No 495
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=77.39 E-value=2.9 Score=36.12 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=28.9
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-|+|.|| |..|..+|..|+++ |.+|+++.+..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~ 41 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQ 41 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45889998 78999999999999 99999998763
No 496
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=77.36 E-value=2.1 Score=40.46 Aligned_cols=50 Identities=16% Similarity=0.128 Sum_probs=35.3
Q ss_pred HHHHHHHhCCCcEEEcceeeeeEEEeCCEEEEEEEceeeeeccCCCCCCCCCeEEEcCEEEEcCCC
Q 018188 176 TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGH 241 (359)
Q Consensus 176 ~L~~~~~~~~gv~i~~~~~V~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A~~VIlAtGg 241 (359)
.+.+.+.+..+.+++++++|++|..+++++. |.+. ..+++||.||+|++.
T Consensus 207 ~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~-v~~~---------------~g~~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 207 AMFEHLNATLEHPAERNVDITRITREDGKVH-IHTT---------------DWDRESDVLVLTVPL 256 (424)
T ss_dssp HHHHHHHHHSSSCCBCSCCEEEEECCTTCEE-EEES---------------SCEEEESEEEECSCH
T ss_pred HHHHHHHHhhcceEEcCCEEEEEEEECCEEE-EEEC---------------CCeEEcCEEEECCCH
Confidence 3344444444567899999999988777665 5442 134899999999994
No 497
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=77.35 E-value=1.7 Score=40.00 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
-.|+|+|+|+.|+.++..+... |.+|+.+++.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~ 200 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDD 200 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999988777777 99999998753
No 498
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=77.35 E-value=2.9 Score=36.82 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=28.1
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGA-GSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~ 46 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKA-GATVAIADLDV 46 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45888887 56799999999999 99999998764
No 499
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=77.24 E-value=2.1 Score=41.90 Aligned_cols=33 Identities=15% Similarity=0.376 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
.+|.|||.|..|...|..|++. |.+|.++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3699999999999999999999 99999999864
No 500
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=77.21 E-value=1.8 Score=44.82 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeecc
Q 018188 92 TDVIVVGAGSAGLSCAYEISKNPSIRVAIIEQSV 125 (359)
Q Consensus 92 ~DVvIIGgG~aGl~aA~~La~~~G~~V~vlEk~~ 125 (359)
..|.|||+|..|...|+.++.. |++|+++|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 4799999999999999999999 99999999764
Done!