Query 018190
Match_columns 359
No_of_seqs 166 out of 1215
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 06:54:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018190.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018190hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2.1E-89 4.6E-94 653.5 30.7 340 1-352 112-453 (454)
2 PLN02213 sinapoylglucose-malat 100.0 4E-79 8.7E-84 572.0 32.1 316 6-349 1-319 (319)
3 PLN03016 sinapoylglucose-malat 100.0 1.4E-77 3E-82 578.4 31.6 321 1-349 110-433 (433)
4 PLN02209 serine carboxypeptida 100.0 1.8E-77 3.9E-82 577.7 31.8 323 1-349 112-437 (437)
5 PF00450 Peptidase_S10: Serine 100.0 1.8E-78 3.9E-83 590.2 20.3 327 1-346 80-415 (415)
6 PTZ00472 serine carboxypeptida 100.0 1.2E-73 2.6E-78 557.6 28.2 322 1-350 116-462 (462)
7 KOG1283 Serine carboxypeptidas 100.0 3.6E-57 7.7E-62 400.4 13.1 336 1-344 66-411 (414)
8 COG2939 Carboxypeptidase C (ca 100.0 7.7E-50 1.7E-54 377.5 15.2 324 1-349 141-493 (498)
9 PRK03204 haloalkane dehalogena 98.7 6.6E-07 1.4E-11 82.9 17.3 60 258-345 227-286 (286)
10 TIGR03056 bchO_mg_che_rel puta 98.6 2.3E-06 5E-11 77.9 15.0 59 258-345 220-278 (278)
11 TIGR03611 RutD pyrimidine util 98.5 2E-06 4.4E-11 76.9 13.1 59 258-345 198-256 (257)
12 TIGR01250 pro_imino_pep_2 prol 98.5 1.3E-05 2.8E-10 72.8 18.3 63 253-345 226-288 (288)
13 TIGR03343 biphenyl_bphD 2-hydr 98.5 2.1E-05 4.5E-10 72.1 18.9 60 257-345 222-281 (282)
14 PHA02857 monoglyceride lipase; 98.5 1.3E-05 2.8E-10 73.5 17.2 82 7-104 53-134 (276)
15 PLN02824 hydrolase, alpha/beta 98.4 6.3E-06 1.4E-10 76.4 14.7 60 258-346 234-293 (294)
16 PRK00870 haloalkane dehalogena 98.4 1.6E-05 3.4E-10 74.0 16.5 69 253-348 234-302 (302)
17 PRK10673 acyl-CoA esterase; Pr 98.4 5.4E-06 1.2E-10 74.7 13.0 60 258-346 195-254 (255)
18 PLN02385 hydrolase; alpha/beta 98.4 1.2E-05 2.5E-10 76.7 14.7 84 6-103 115-198 (349)
19 PLN02679 hydrolase, alpha/beta 98.3 3.2E-05 7E-10 74.1 17.5 64 258-346 292-356 (360)
20 PLN02298 hydrolase, alpha/beta 98.3 4.3E-05 9.3E-10 72.1 17.4 85 6-104 87-171 (330)
21 PF12697 Abhydrolase_6: Alpha/ 98.3 2.1E-06 4.5E-11 74.8 6.9 81 5-104 23-103 (228)
22 TIGR02240 PHA_depoly_arom poly 98.3 1E-05 2.2E-10 74.3 11.7 61 258-348 207-267 (276)
23 PRK03592 haloalkane dehalogena 98.3 1.7E-05 3.6E-10 73.6 13.1 64 258-349 228-291 (295)
24 TIGR02427 protocat_pcaD 3-oxoa 98.2 2.1E-05 4.5E-10 69.7 12.3 60 257-345 192-251 (251)
25 KOG4409 Predicted hydrolase/ac 98.2 0.00015 3.2E-09 67.3 17.5 85 5-106 115-199 (365)
26 PLN03084 alpha/beta hydrolase 98.1 0.00012 2.6E-09 70.5 15.6 58 258-345 325-382 (383)
27 PLN02578 hydrolase 98.1 0.00016 3.5E-09 69.0 16.4 76 5-101 111-186 (354)
28 PRK10749 lysophospholipase L2; 98.1 0.00024 5.1E-09 67.2 17.2 84 6-103 81-167 (330)
29 TIGR01607 PST-A Plasmodium sub 98.0 0.00018 4E-09 68.1 15.1 62 258-346 270-332 (332)
30 PRK14875 acetoin dehydrogenase 98.0 0.00026 5.6E-09 67.7 15.4 58 257-346 313-370 (371)
31 PLN02652 hydrolase; alpha/beta 97.9 0.0002 4.4E-09 69.4 14.2 85 6-104 163-247 (395)
32 KOG4178 Soluble epoxide hydrol 97.9 0.00016 3.5E-09 66.6 12.5 62 256-345 256-318 (322)
33 PLN02894 hydrolase, alpha/beta 97.8 0.00053 1.2E-08 66.7 15.3 81 5-102 130-211 (402)
34 TIGR03695 menH_SHCHC 2-succiny 97.8 0.00046 9.9E-09 60.8 12.9 59 257-345 193-251 (251)
35 PF00326 Peptidase_S9: Prolyl 97.6 0.0014 3E-08 57.7 13.0 93 5-108 13-105 (213)
36 TIGR03100 hydr1_PEP hydrolase, 97.6 0.0039 8.3E-08 57.3 16.1 79 7-104 58-136 (274)
37 KOG1454 Predicted hydrolase/ac 97.6 0.0017 3.7E-08 61.2 13.9 60 258-346 264-323 (326)
38 PLN02511 hydrolase 97.4 0.0016 3.4E-08 63.1 11.0 82 5-101 128-210 (388)
39 KOG1455 Lysophospholipase [Lip 97.2 0.0061 1.3E-07 55.7 11.8 80 9-102 85-164 (313)
40 PLN02980 2-oxoglutarate decarb 97.2 0.015 3.2E-07 66.3 17.2 75 257-349 1567-1641(1655)
41 TIGR01738 bioH putative pimelo 96.8 0.0037 8.1E-08 54.9 7.0 59 257-344 187-245 (245)
42 PRK10349 carboxylesterase BioH 96.7 0.0043 9.3E-08 56.0 7.0 60 257-345 195-254 (256)
43 PRK07581 hypothetical protein; 96.5 0.0078 1.7E-07 57.0 7.0 60 257-345 274-334 (339)
44 COG1506 DAP2 Dipeptidyl aminop 96.4 0.04 8.6E-07 56.8 12.1 88 4-103 421-508 (620)
45 PF08386 Abhydrolase_4: TAP-li 96.4 0.015 3.2E-07 45.1 6.9 67 258-353 34-101 (103)
46 PF00561 Abhydrolase_1: alpha/ 96.3 0.013 2.8E-07 51.2 7.3 78 8-102 2-79 (230)
47 PLN02965 Probable pheophorbida 96.1 0.013 2.8E-07 53.0 6.1 60 257-345 192-251 (255)
48 TIGR01392 homoserO_Ac_trn homo 96.0 0.024 5.2E-07 54.0 8.0 63 258-345 288-351 (351)
49 PRK08775 homoserine O-acetyltr 96.0 0.0087 1.9E-07 56.8 4.8 61 258-346 277-338 (343)
50 PLN02965 Probable pheophorbida 95.8 0.037 8E-07 50.0 7.9 77 7-102 31-107 (255)
51 PRK10349 carboxylesterase BioH 95.7 0.019 4.1E-07 51.7 5.7 70 5-100 38-107 (256)
52 PRK11126 2-succinyl-6-hydroxy- 95.7 0.031 6.8E-07 49.6 7.0 75 6-101 27-101 (242)
53 TIGR01249 pro_imino_pep_1 prol 95.7 0.024 5.3E-07 52.8 6.4 80 5-103 52-131 (306)
54 PLN03087 BODYGUARD 1 domain co 95.7 0.035 7.7E-07 55.1 7.5 67 251-346 410-478 (481)
55 PRK00175 metX homoserine O-ace 95.5 0.029 6.3E-07 54.1 6.3 65 258-347 309-374 (379)
56 PLN02211 methyl indole-3-aceta 95.3 0.083 1.8E-06 48.4 8.3 59 258-346 211-269 (273)
57 PRK06765 homoserine O-acetyltr 95.2 0.072 1.6E-06 51.6 8.0 65 257-346 322-387 (389)
58 PRK05077 frsA fermentation/res 95.2 0.068 1.5E-06 52.2 7.7 79 7-103 223-301 (414)
59 PF06500 DUF1100: Alpha/beta h 94.9 0.017 3.7E-07 55.6 2.4 79 7-103 219-297 (411)
60 PRK06489 hypothetical protein; 94.7 0.099 2.1E-06 50.0 7.2 59 258-346 292-356 (360)
61 TIGR03101 hydr2_PEP hydrolase, 94.4 0.16 3.4E-06 46.5 7.6 83 7-107 57-139 (266)
62 TIGR01738 bioH putative pimelo 94.4 0.058 1.3E-06 47.2 4.7 71 5-101 29-99 (245)
63 PRK11126 2-succinyl-6-hydroxy- 94.4 0.11 2.4E-06 46.1 6.5 30 316-345 211-240 (242)
64 COG2267 PldB Lysophospholipase 93.3 0.36 7.9E-06 44.9 7.9 84 7-106 62-146 (298)
65 TIGR00976 /NonD putative hydro 93.0 0.25 5.4E-06 50.2 6.8 82 6-104 53-134 (550)
66 PRK08775 homoserine O-acetyltr 92.7 0.29 6.3E-06 46.4 6.5 77 5-103 98-174 (343)
67 COG0596 MhpC Predicted hydrola 92.2 0.57 1.2E-05 40.6 7.4 63 254-344 217-279 (282)
68 cd00707 Pancreat_lipase_like P 92.1 0.19 4E-06 46.3 4.3 81 6-101 66-146 (275)
69 PRK06489 hypothetical protein; 92.0 0.46 9.9E-06 45.4 7.0 80 5-101 104-188 (360)
70 PF00561 Abhydrolase_1: alpha/ 91.9 0.29 6.3E-06 42.5 5.1 56 257-341 174-229 (230)
71 PRK10566 esterase; Provisional 91.3 0.51 1.1E-05 42.1 6.2 62 258-346 186-247 (249)
72 PLN03087 BODYGUARD 1 domain co 91.2 0.62 1.3E-05 46.4 7.0 78 5-101 231-308 (481)
73 PF03583 LIP: Secretory lipase 90.6 0.99 2.1E-05 41.9 7.4 70 258-352 219-290 (290)
74 PLN02454 triacylglycerol lipas 90.4 0.85 1.9E-05 44.1 6.9 68 34-104 206-273 (414)
75 PRK11460 putative hydrolase; P 90.4 0.84 1.8E-05 40.7 6.6 63 257-344 147-209 (232)
76 PF05677 DUF818: Chlamydia CHL 90.3 0.9 2E-05 42.6 6.7 66 5-82 170-236 (365)
77 PRK05855 short chain dehydroge 90.0 0.7 1.5E-05 46.8 6.5 56 5-68 50-105 (582)
78 TIGR02821 fghA_ester_D S-formy 89.7 2.1 4.6E-05 39.1 8.9 52 42-104 123-175 (275)
79 PRK05855 short chain dehydroge 89.6 0.38 8.3E-06 48.7 4.1 59 258-346 233-291 (582)
80 KOG4391 Predicted alpha/beta h 89.3 0.35 7.6E-06 42.4 3.0 81 6-104 106-186 (300)
81 TIGR03230 lipo_lipase lipoprot 88.9 2 4.3E-05 42.2 8.3 79 6-100 73-152 (442)
82 PF11144 DUF2920: Protein of u 88.8 0.84 1.8E-05 43.9 5.5 60 36-105 162-222 (403)
83 PRK10566 esterase; Provisional 88.7 2.1 4.6E-05 38.1 7.9 65 7-74 55-124 (249)
84 PF07519 Tannase: Tannase and 88.6 1.8 3.8E-05 43.1 7.9 87 247-350 342-430 (474)
85 PRK05371 x-prolyl-dipeptidyl a 88.5 1.9 4.2E-05 45.6 8.5 93 6-121 279-385 (767)
86 PF00975 Thioesterase: Thioest 88.4 0.96 2.1E-05 39.7 5.4 77 7-102 28-104 (229)
87 PRK13604 luxD acyl transferase 88.4 1.6 3.6E-05 40.6 7.0 57 258-342 202-258 (307)
88 PLN02442 S-formylglutathione h 88.1 1.9 4.1E-05 39.7 7.4 56 37-105 126-181 (283)
89 PRK07581 hypothetical protein; 88.0 1.3 2.7E-05 41.8 6.3 84 5-102 70-159 (339)
90 PF11288 DUF3089: Protein of u 87.9 0.91 2E-05 39.7 4.7 40 37-82 77-116 (207)
91 KOG2382 Predicted alpha/beta h 87.9 1 2.2E-05 41.9 5.3 60 257-345 252-311 (315)
92 PF10230 DUF2305: Uncharacteri 87.4 2.7 5.8E-05 38.4 7.8 78 18-103 41-123 (266)
93 PF01764 Lipase_3: Lipase (cla 87.4 1.3 2.7E-05 35.7 5.2 61 36-102 46-106 (140)
94 PLN02211 methyl indole-3-aceta 87.2 1.5 3.3E-05 40.1 6.1 78 6-102 45-122 (273)
95 KOG1515 Arylacetamide deacetyl 86.9 2.9 6.2E-05 39.6 7.8 61 40-106 150-211 (336)
96 PF05577 Peptidase_S28: Serine 85.8 1.6 3.5E-05 42.9 5.8 73 31-113 87-159 (434)
97 PLN02872 triacylglycerol lipas 85.8 1.7 3.6E-05 42.3 5.8 61 258-346 325-388 (395)
98 KOG2564 Predicted acetyltransf 85.7 1.3 2.8E-05 40.5 4.5 74 10-99 106-179 (343)
99 COG0400 Predicted esterase [Ge 85.3 2.3 5.1E-05 37.3 6.0 60 257-346 145-204 (207)
100 TIGR01249 pro_imino_pep_1 prol 85.1 3.6 7.9E-05 38.1 7.6 52 258-340 248-299 (306)
101 PRK10162 acetyl esterase; Prov 84.7 2.9 6.2E-05 39.2 6.8 61 39-104 137-197 (318)
102 PF07859 Abhydrolase_3: alpha/ 84.4 1.5 3.2E-05 38.0 4.4 63 35-104 47-112 (211)
103 PF02230 Abhydrolase_2: Phosph 84.4 2 4.4E-05 37.7 5.3 59 258-345 155-213 (216)
104 PF10081 Abhydrolase_9: Alpha/ 84.2 2.2 4.8E-05 39.0 5.4 61 8-68 33-120 (289)
105 COG0596 MhpC Predicted hydrola 83.4 3 6.6E-05 35.9 6.0 74 7-103 51-124 (282)
106 KOG2183 Prolylcarboxypeptidase 83.1 2.8 6.1E-05 40.4 5.8 67 6-79 111-185 (492)
107 PLN02571 triacylglycerol lipas 83.0 4.4 9.4E-05 39.4 7.2 68 35-103 205-276 (413)
108 PF10340 DUF2424: Protein of u 82.6 4.1 9E-05 39.0 6.8 45 56-105 194-238 (374)
109 PF12695 Abhydrolase_5: Alpha/ 82.4 3.2 6.9E-05 33.1 5.4 46 254-327 100-145 (145)
110 cd00741 Lipase Lipase. Lipase 81.7 4.7 0.0001 33.2 6.2 59 36-102 10-68 (153)
111 PRK10985 putative hydrolase; P 81.6 7.7 0.00017 36.4 8.3 46 258-332 255-300 (324)
112 PRK00175 metX homoserine O-ace 81.5 4.6 9.9E-05 38.9 6.9 84 6-102 91-182 (379)
113 TIGR01836 PHA_synth_III_C poly 81.2 3.1 6.7E-05 39.5 5.6 62 257-346 285-349 (350)
114 KOG1838 Alpha/beta hydrolase [ 81.2 5.3 0.00012 38.6 7.0 76 14-102 161-236 (409)
115 PF02129 Peptidase_S15: X-Pro 80.0 4.8 0.0001 36.7 6.2 83 7-106 58-140 (272)
116 cd00519 Lipase_3 Lipase (class 80.0 4.6 0.0001 35.7 6.0 56 40-103 114-169 (229)
117 PF12695 Abhydrolase_5: Alpha/ 78.3 4.8 0.0001 32.1 5.1 68 7-101 27-94 (145)
118 PRK10985 putative hydrolase; P 78.3 6.5 0.00014 36.8 6.7 55 8-69 89-143 (324)
119 TIGR01838 PHA_synth_I poly(R)- 78.2 2.7 5.9E-05 42.4 4.3 85 7-105 221-305 (532)
120 TIGR01392 homoserO_Ac_trn homo 78.1 7 0.00015 37.0 6.9 84 5-102 71-162 (351)
121 PLN02753 triacylglycerol lipas 77.8 7.3 0.00016 38.9 6.9 71 33-103 286-360 (531)
122 PLN00021 chlorophyllase 77.0 12 0.00026 35.1 8.0 85 7-104 80-168 (313)
123 PF08237 PE-PPE: PE-PPE domain 76.7 8.6 0.00019 34.2 6.6 88 7-102 3-90 (225)
124 PLN02719 triacylglycerol lipas 75.5 9.3 0.0002 38.1 6.9 69 35-103 274-346 (518)
125 KOG4627 Kynurenine formamidase 74.4 2.6 5.6E-05 36.8 2.5 70 18-102 103-172 (270)
126 KOG2100 Dipeptidyl aminopeptid 74.2 5.3 0.00011 42.2 5.3 87 7-105 559-647 (755)
127 COG0429 Predicted hydrolase of 74.0 8.3 0.00018 36.2 5.9 54 38-101 132-185 (345)
128 PF05990 DUF900: Alpha/beta hy 71.7 7.1 0.00015 34.9 4.8 87 17-105 51-140 (233)
129 KOG1552 Predicted alpha/beta h 71.6 6.9 0.00015 35.3 4.6 60 258-346 192-251 (258)
130 PRK14567 triosephosphate isome 71.4 10 0.00022 34.4 5.7 61 34-105 178-238 (253)
131 PRK14566 triosephosphate isome 71.3 10 0.00022 34.5 5.7 61 34-105 188-248 (260)
132 COG2267 PldB Lysophospholipase 71.2 11 0.00023 35.1 6.1 64 257-347 227-294 (298)
133 PF00151 Lipase: Lipase; Inte 71.0 1.2 2.5E-05 42.2 -0.4 71 5-80 103-173 (331)
134 COG4425 Predicted membrane pro 70.3 12 0.00026 36.5 6.1 35 34-68 374-408 (588)
135 TIGR01840 esterase_phb esteras 69.9 9.5 0.00021 33.2 5.2 30 260-289 170-199 (212)
136 PRK11460 putative hydrolase; P 69.7 21 0.00045 31.7 7.5 50 42-102 89-138 (232)
137 PLN02761 lipase class 3 family 68.4 17 0.00036 36.4 6.9 69 35-103 269-343 (527)
138 PRK07868 acyl-CoA synthetase; 68.3 8.8 0.00019 42.1 5.6 69 258-356 297-369 (994)
139 PRK11071 esterase YqiA; Provis 67.3 14 0.00031 31.7 5.7 55 257-345 135-189 (190)
140 PLN02324 triacylglycerol lipas 66.8 21 0.00045 34.7 7.1 69 34-103 193-266 (415)
141 PRK05077 frsA fermentation/res 65.9 15 0.00033 35.9 6.2 57 258-346 355-411 (414)
142 PF06057 VirJ: Bacterial virul 64.8 15 0.00033 31.7 5.2 65 31-104 45-109 (192)
143 PF05728 UPF0227: Uncharacteri 64.8 4.6 0.0001 34.8 2.1 52 41-108 46-97 (187)
144 PF08840 BAAT_C: BAAT / Acyl-C 63.3 13 0.00028 32.7 4.7 47 45-102 10-56 (213)
145 smart00824 PKS_TE Thioesterase 62.9 30 0.00066 29.0 7.0 76 6-100 25-100 (212)
146 PLN02408 phospholipase A1 59.8 24 0.00052 33.8 6.1 64 35-103 179-242 (365)
147 KOG4569 Predicted lipase [Lipi 59.7 21 0.00045 33.8 5.7 60 38-103 155-214 (336)
148 COG0657 Aes Esterase/lipase [L 58.3 54 0.0012 30.3 8.3 64 37-106 130-195 (312)
149 KOG1553 Predicted alpha/beta h 58.2 24 0.00052 33.4 5.5 75 13-102 262-345 (517)
150 PLN02802 triacylglycerol lipas 57.3 26 0.00056 34.9 6.0 64 35-103 309-372 (509)
151 PF02230 Abhydrolase_2: Phosph 56.0 22 0.00047 31.0 4.9 44 54-107 102-145 (216)
152 PLN02733 phosphatidylcholine-s 55.5 26 0.00055 34.6 5.7 40 34-80 142-181 (440)
153 COG2945 Predicted hydrolase of 55.1 19 0.0004 31.2 4.0 55 17-82 70-124 (210)
154 PF11187 DUF2974: Protein of u 54.0 30 0.00066 30.7 5.4 37 38-78 69-105 (224)
155 PRK10115 protease 2; Provision 53.5 38 0.00082 35.5 6.9 62 35-107 503-564 (686)
156 PF07389 DUF1500: Protein of u 52.6 11 0.00024 27.8 1.9 35 38-80 7-41 (100)
157 PLN00413 triacylglycerol lipas 51.8 18 0.00038 35.8 3.8 38 39-79 269-306 (479)
158 PRK06765 homoserine O-acetyltr 51.7 25 0.00054 34.0 4.9 53 36-101 142-195 (389)
159 PLN02310 triacylglycerol lipas 51.7 40 0.00086 32.8 6.2 64 35-103 186-250 (405)
160 PLN02429 triosephosphate isome 51.0 34 0.00074 32.0 5.4 61 34-105 238-299 (315)
161 TIGR01836 PHA_synth_III_C poly 50.1 52 0.0011 31.1 6.8 55 38-105 120-174 (350)
162 PF03403 PAF-AH_p_II: Platelet 49.9 12 0.00026 36.1 2.4 38 58-106 229-266 (379)
163 PRK13604 luxD acyl transferase 49.9 64 0.0014 30.2 7.1 80 5-103 63-142 (307)
164 PLN02847 triacylglycerol lipas 49.8 36 0.00079 34.7 5.7 51 41-99 238-288 (633)
165 PF06821 Ser_hydrolase: Serine 49.8 29 0.00064 29.3 4.5 42 259-330 115-156 (171)
166 KOG1552 Predicted alpha/beta h 49.7 74 0.0016 28.9 7.1 78 7-105 89-166 (258)
167 PF00681 Plectin: Plectin repe 49.1 14 0.0003 23.7 1.8 33 99-131 11-43 (45)
168 PLN02934 triacylglycerol lipas 48.9 50 0.0011 33.1 6.4 38 39-79 306-343 (515)
169 PLN02561 triosephosphate isome 47.7 42 0.00092 30.4 5.4 60 34-104 179-239 (253)
170 PRK11071 esterase YqiA; Provis 47.4 24 0.00052 30.3 3.7 33 40-75 47-79 (190)
171 PF07819 PGAP1: PGAP1-like pro 47.0 57 0.0012 28.9 6.1 63 37-106 63-128 (225)
172 cd00311 TIM Triosephosphate is 46.9 53 0.0011 29.6 5.9 58 35-104 176-234 (242)
173 TIGR03502 lipase_Pla1_cef extr 46.9 40 0.00086 35.8 5.7 68 7-75 477-573 (792)
174 PF03959 FSH1: Serine hydrolas 46.8 28 0.0006 30.4 4.1 48 258-334 161-208 (212)
175 PF01083 Cutinase: Cutinase; 45.6 23 0.0005 30.2 3.3 82 9-104 42-125 (179)
176 PF06259 Abhydrolase_8: Alpha/ 45.5 46 0.00099 28.4 5.0 62 5-71 62-123 (177)
177 PF06342 DUF1057: Alpha/beta h 44.8 1.3E+02 0.0028 27.9 7.9 72 9-101 65-136 (297)
178 PRK04940 hypothetical protein; 44.1 30 0.00066 29.6 3.7 37 57-106 60-96 (180)
179 PRK14565 triosephosphate isome 43.1 48 0.001 29.8 4.9 54 33-105 172-225 (237)
180 PLN03037 lipase class 3 family 42.9 68 0.0015 32.2 6.3 63 36-102 296-359 (525)
181 PLN02162 triacylglycerol lipas 42.8 34 0.00075 33.8 4.2 38 39-79 263-300 (475)
182 PF05057 DUF676: Putative seri 41.8 39 0.00084 29.7 4.2 46 34-80 56-101 (217)
183 PF02450 LCAT: Lecithin:choles 41.0 43 0.00093 32.4 4.7 61 39-104 101-163 (389)
184 PRK00042 tpiA triosephosphate 40.8 77 0.0017 28.7 6.0 60 34-105 179-239 (250)
185 PF08840 BAAT_C: BAAT / Acyl-C 40.0 37 0.00081 29.7 3.8 48 258-328 115-163 (213)
186 PF03583 LIP: Secretory lipase 39.9 99 0.0022 28.5 6.8 66 34-104 45-115 (290)
187 KOG2182 Hydrolytic enzymes of 39.9 62 0.0013 32.2 5.5 47 31-81 146-192 (514)
188 PTZ00333 triosephosphate isome 39.7 65 0.0014 29.2 5.4 61 33-104 181-242 (255)
189 COG1073 Hydrolases of the alph 39.7 85 0.0018 27.9 6.3 60 259-345 233-295 (299)
190 COG3509 LpqC Poly(3-hydroxybut 39.2 2E+02 0.0043 26.8 8.3 50 42-102 130-179 (312)
191 TIGR01838 PHA_synth_I poly(R)- 38.7 1.8E+02 0.0039 29.6 8.8 49 258-335 415-463 (532)
192 COG4757 Predicted alpha/beta h 38.5 50 0.0011 29.6 4.2 25 258-282 216-240 (281)
193 COG3571 Predicted hydrolase of 38.0 21 0.00046 30.0 1.7 27 53-79 85-111 (213)
194 COG2945 Predicted hydrolase of 36.1 44 0.00095 29.0 3.4 60 254-344 145-204 (210)
195 COG0400 Predicted esterase [Ge 35.3 1.1E+02 0.0023 26.9 5.8 61 35-106 78-138 (207)
196 PF10503 Esterase_phd: Esteras 35.1 74 0.0016 28.2 4.9 28 258-285 169-196 (220)
197 PLN02872 triacylglycerol lipas 34.8 68 0.0015 31.1 5.0 57 8-69 109-172 (395)
198 PLN02442 S-formylglutathione h 34.7 99 0.0022 28.2 5.9 49 256-329 215-264 (283)
199 PF12532 DUF3732: Protein of u 34.1 60 0.0013 28.1 4.1 45 6-50 100-151 (193)
200 KOG2551 Phospholipase/carboxyh 34.1 1E+02 0.0022 27.4 5.3 57 258-344 163-221 (230)
201 COG3208 GrsT Predicted thioest 33.6 76 0.0017 28.5 4.6 59 258-345 176-234 (244)
202 PF00756 Esterase: Putative es 33.6 31 0.00067 30.6 2.3 37 59-105 117-153 (251)
203 KOG2682 NAD-dependent histone 33.6 25 0.00055 31.3 1.6 59 16-82 43-115 (314)
204 PRK10439 enterobactin/ferric e 33.4 84 0.0018 30.7 5.4 36 57-102 288-323 (411)
205 PF10503 Esterase_phd: Esteras 32.8 49 0.0011 29.3 3.3 49 44-102 84-132 (220)
206 PF12740 Chlorophyllase2: Chlo 32.1 1.3E+02 0.0027 27.5 5.9 66 32-102 62-131 (259)
207 PRK10252 entF enterobactin syn 31.6 1.4E+02 0.003 33.7 7.5 77 6-101 1094-1170(1296)
208 KOG3253 Predicted alpha/beta h 31.4 98 0.0021 31.7 5.4 33 252-284 298-330 (784)
209 PF07849 DUF1641: Protein of u 30.9 18 0.00039 22.9 0.2 17 204-220 15-31 (42)
210 PRK13962 bifunctional phosphog 30.8 93 0.002 32.3 5.3 61 34-105 574-635 (645)
211 KOG3724 Negative regulator of 30.8 69 0.0015 33.8 4.3 40 37-80 156-201 (973)
212 COG3208 GrsT Predicted thioest 30.7 97 0.0021 27.9 4.8 27 53-83 70-96 (244)
213 PF08060 NOSIC: NOSIC (NUC001) 30.0 40 0.00086 22.4 1.8 20 36-55 15-35 (53)
214 PF01738 DLH: Dienelactone hyd 29.9 2.5E+02 0.0055 24.1 7.5 66 253-343 140-210 (218)
215 PF10929 DUF2811: Protein of u 29.8 49 0.0011 22.5 2.1 23 34-56 4-26 (57)
216 KOG2382 Predicted alpha/beta h 29.8 73 0.0016 29.8 4.0 35 31-68 100-134 (315)
217 TIGR01840 esterase_phb esteras 29.1 56 0.0012 28.2 3.1 55 37-102 76-130 (212)
218 PF08538 DUF1749: Protein of u 28.1 1.5E+02 0.0033 27.7 5.8 71 32-107 82-153 (303)
219 PRK05371 x-prolyl-dipeptidyl a 27.5 1.8E+02 0.0039 31.0 7.0 28 258-285 455-482 (767)
220 KOG3877 NADH:ubiquinone oxidor 27.2 76 0.0016 29.3 3.5 50 3-69 67-116 (393)
221 TIGR00190 thiC thiamine biosyn 27.1 50 0.0011 31.9 2.5 31 318-349 258-288 (423)
222 PF03096 Ndr: Ndr family; Int 26.9 29 0.00062 32.0 0.8 34 316-349 248-281 (283)
223 PF06821 Ser_hydrolase: Serine 26.1 1.1E+02 0.0024 25.8 4.3 51 43-103 42-92 (171)
224 TIGR00419 tim triosephosphate 24.7 1.6E+02 0.0034 25.8 5.0 54 35-104 151-204 (205)
225 PRK15492 triosephosphate isome 24.4 1.7E+02 0.0037 26.7 5.3 60 34-105 188-248 (260)
226 PF03283 PAE: Pectinacetyleste 24.4 2.9E+02 0.0062 26.5 7.2 90 6-103 104-198 (361)
227 cd03871 M14_CPB Peptidase M14 24.2 47 0.001 30.9 1.8 36 37-74 9-44 (300)
228 cd00312 Esterase_lipase Estera 23.7 80 0.0017 31.3 3.5 32 38-70 158-189 (493)
229 PF05448 AXE1: Acetyl xylan es 23.5 51 0.0011 31.0 1.9 46 46-102 164-209 (320)
230 PF10609 ParA: ParA/MinD ATPas 23.4 52 0.0011 24.2 1.5 12 8-19 2-13 (81)
231 KOG2931 Differentiation-relate 22.4 1.6E+02 0.0034 27.5 4.6 36 316-351 275-310 (326)
232 KOG3505 Mitochondrial/chloropl 22.4 31 0.00068 22.8 0.1 13 14-26 15-27 (55)
233 PRK10115 protease 2; Provision 22.3 1.9E+02 0.0041 30.4 5.9 28 258-285 605-633 (686)
234 COG4782 Uncharacterized protei 22.1 1.8E+02 0.0039 27.9 5.1 87 16-106 148-238 (377)
235 PF01555 N6_N4_Mtase: DNA meth 22.0 1.1E+02 0.0023 26.3 3.6 40 8-50 2-41 (231)
236 PF04414 tRNA_deacylase: D-ami 21.3 1.9E+02 0.0042 25.4 4.9 48 31-81 104-152 (213)
237 PF06028 DUF915: Alpha/beta hy 21.3 2.7E+02 0.0058 25.3 6.0 59 35-101 84-143 (255)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-89 Score=653.49 Aligned_cols=340 Identities=43% Similarity=0.791 Sum_probs=295.8
Q ss_pred CCcccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 1 ysW~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
|||||.||||||||||||||||+++++++.++|+.+|+|++.||+.||++||||++|||||+||||||||||+||++|++
T Consensus 112 ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~ 191 (454)
T KOG1282|consen 112 YSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILK 191 (454)
T ss_pred ccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHh
Confidence 79999999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceeeeeEeEecCCcCCCCCCchhhHHHHHHcCCCCHHHHHHHhccCCCCCccCCCCCCCCchHHHHHHHHHHH
Q 018190 81 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI 160 (359)
Q Consensus 81 ~n~~~~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~ 160 (359)
.|+....+.|||||++||||++|+..|..++.+|++.||+|++++++.+++.|......-......+..|..++++....
T Consensus 192 ~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~ 271 (454)
T KOG1282|consen 192 GNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEFDSK 271 (454)
T ss_pred ccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHHHHH
Confidence 99754456899999999999999999999999999999999999999999999865321111113356899999998855
Q ss_pred hcCCCCccccccccCCCchHHHHHHHhhhhhccccCcccccchhhHhhcCchHHHHhhCCCCCCCccccccccccccccC
Q 018190 161 VGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD 240 (359)
Q Consensus 161 ~~~~~~~yd~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~~~~~~ 240 (359)
....++.|++..+.|....... .....+...++|.+...+.|||+++||+||||+....| +|+.||..+....
T Consensus 272 ~~~~i~~y~i~~~~C~~~~~~~------~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~-~W~~Cn~~v~~~~ 344 (454)
T KOG1282|consen 272 TTGDIDNYYILTPDCYPTSYEL------KKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG-KWERCNDEVNYNY 344 (454)
T ss_pred HhccCchhhhcchhhccccccc------cccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC-cccccChhhhccc
Confidence 5447889998888897511100 00112345688987666899999999999999875544 8999999987656
Q ss_pred CCCCCChHHHHHHHHhCC-ccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeC-CeeeEEEEEeCCeeEE
Q 018190 241 TDSNINILPVLKRIIQNG-IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHK-QQVGGWGTEYGNLLTF 318 (359)
Q Consensus 241 ~d~~~~~~~~l~~LL~~~-irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~-~~~~G~~k~~~n~Ltf 318 (359)
.+...++++.+..++..+ +|||||+||.|++||+.||++||+.| +++...+|+||+.+ +|+|||+++|++ |+|
T Consensus 345 ~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L----~~~~~~~~~pW~~~~~qvaG~~~~Y~~-ltf 419 (454)
T KOG1282|consen 345 NDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSL----NLSITDEWRPWYHKGGQVAGYTKTYGG-LTF 419 (454)
T ss_pred ccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhc----cCccccCccCCccCCCceeeeEEEecC-EEE
Confidence 666678999999999855 99999999999999999999999987 57778999999995 899999999999 999
Q ss_pred EEEcCCCCCCCCCChHHHHHHHHHHhcCCCCCCC
Q 018190 319 VTVRGAAHMVPYAQPSRALHLFSSFVHGRRLPNN 352 (359)
Q Consensus 319 ~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~~~ 352 (359)
+||+|||||||.|||++|++||++||.|++++..
T Consensus 420 ~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 420 ATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred EEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999999764
No 2
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=4e-79 Score=572.04 Aligned_cols=316 Identities=26% Similarity=0.493 Sum_probs=258.4
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
.|||||||||+||||||+++...+ .+++++|+|++.||+.||++||+|+++||||+||||||||||.||++|+++|+..
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998766554 4566777999999999999999999999999999999999999999999988754
Q ss_pred CCceeeeeEeEecCCcCCCCCCchhhHHHHHHcCCCCHHHHHHHhccCCCCCccCCCCCCCCchHHHHHHHHHHHhcCCC
Q 018190 86 KGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYI 165 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 165 (359)
.+++||||||+|||||++|..|..++.+|+|.+|+|++++++.+.+.|...... .......|.+++.......+ .+
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~---~~~~~~~c~~~~~~~~~~~~-~~ 155 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN---VDPSNTQCLKLTEEYHKCTA-KI 155 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccC---CCCCcHHHHHHHHHHHHHHh-cC
Confidence 456899999999999999999999999999999999999999999998632111 11234679888876554433 57
Q ss_pred CccccccccCCCchHHHHHHHhhhhhccccCcccccc---hhhHhhcCchHHHHhhCCCCCCCccccccccccccccCCC
Q 018190 166 NNYDVILDVCYPTIVEQELRLRKMATKMSVGVDVCMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTD 242 (359)
Q Consensus 166 ~~yd~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~~~~~~~d 242 (359)
|.|+++.+.|.... . ..+.|.. ..+..|||+++||+||||+... +..|+.|+..+.+. .|
T Consensus 156 ~~~~~~~~~~~~~~-------------~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~~~-~d 218 (319)
T PLN02213 156 NIHHILTPDCDVTN-------------V--TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIPYN-HD 218 (319)
T ss_pred CHhhcccCcccCcc-------------C--CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccccc-cc
Confidence 88888755563210 0 1134542 2578999999999999997422 24799999887632 45
Q ss_pred CCCChHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEc
Q 018190 243 SNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR 322 (359)
Q Consensus 243 ~~~~~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~ 322 (359)
.. +..+.+..+|.+++|||||+||.|++||+.|+++|+++|+| ....+|++|+.+++++||+|+|+|+|||++|+
T Consensus 219 ~~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w----~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~ 293 (319)
T PLN02213 219 IV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNY----SPIHNWRPWMINNQIAGYTRAYSNKMTFATIK 293 (319)
T ss_pred cc-cchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCC----CCCCCCccccCCCEeeeEEEEecCcceEEEEc
Confidence 54 34444445556799999999999999999999999999854 44567999999999999999998559999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHhcCCCC
Q 018190 323 GAAHMVPYAQPSRALHLFSSFVHGRRL 349 (359)
Q Consensus 323 ~AGHmvP~dqP~~a~~mi~~fl~~~~~ 349 (359)
||||||| +||++|++||++||.|+++
T Consensus 294 ~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 294 AGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 9999998 7999999999999999864
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.4e-77 Score=578.44 Aligned_cols=321 Identities=26% Similarity=0.511 Sum_probs=265.2
Q ss_pred CCcccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 1 ysW~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
||||+.|||||||||+||||||+++.... .+|+++|++++.||+.||++||+|+++||||+||||||||||.||++|++
T Consensus 110 ~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 110 YSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred CchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 79999999999999999999998776554 45667789999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceeeeeEeEecCCcCCCCCCchhhHHHHHHcCCCCHHHHHHHhccCCCCCccCCCCCCCCchHHHHHHHHHHH
Q 018190 81 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI 160 (359)
Q Consensus 81 ~n~~~~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~ 160 (359)
+|++....+||||||+||||+++|..|..++.+|+|.+|||++++++.+++.|...... .......|..++......
T Consensus 189 ~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~---~~~~~~~C~~~~~~~~~~ 265 (433)
T PLN03016 189 GNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN---VDPSNTQCLKLTEEYHKC 265 (433)
T ss_pred hcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhcccccc---CCCchHHHHHHHHHHHHH
Confidence 88754456899999999999999999999999999999999999999999999642111 113356799888766544
Q ss_pred hcCCCCccccccccCCCchHHHHHHHhhhhhccccCcccccc---hhhHhhcCchHHHHhhCCCCCCCcccccccccccc
Q 018190 161 VGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDVCMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLN 237 (359)
Q Consensus 161 ~~~~~~~yd~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~~~ 237 (359)
.+ .+|.|+++.+.|.... . ..+.|.. ..++.|||+++||+||||+.... ..|+.|+..+.
T Consensus 266 ~~-~~n~yni~~~~~~~~~-------------~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~cn~~v~ 328 (433)
T PLN03016 266 TA-KINIHHILTPDCDVTN-------------V--TSPDCYYYPYHLIECWANDESVREALHIEKGSK-GKWARCNRTIP 328 (433)
T ss_pred hc-CCChhhccCCcccccc-------------c--CCCcccccchHHHHHHhCCHHHHHHhCCCCCCC-CCCccCCcccc
Confidence 43 6789998766563210 0 1134543 24789999999999999975322 47999998876
Q ss_pred ccCCCCCCChHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeE
Q 018190 238 YSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLT 317 (359)
Q Consensus 238 ~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Lt 317 (359)
+. .|.+ +..+.+..++.+++|||||+||.|++||+.|++.|+++|+ +....+|++|+++++++||+|+|+|+||
T Consensus 329 ~~-~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~----w~~~~~~~~w~~~~~~~G~vk~y~n~lt 402 (433)
T PLN03016 329 YN-HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLN----YSPIHNWRPWMINNQIAGYTRAYSNKMT 402 (433)
T ss_pred cc-cccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCC----CCCCCCcccccCCCEeeeEEEEeCCceE
Confidence 32 4544 3444445556679999999999999999999999999885 4455679999999999999999975599
Q ss_pred EEEEcCCCCCCCCCChHHHHHHHHHHhcCCCC
Q 018190 318 FVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 349 (359)
Q Consensus 318 f~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 349 (359)
|++|++|||||| +||++|++||++||.|+++
T Consensus 403 fv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 403 FATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred EEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 999999999998 7999999999999999875
No 4
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.8e-77 Score=577.66 Aligned_cols=323 Identities=25% Similarity=0.489 Sum_probs=261.1
Q ss_pred CCcccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 1 ysW~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
||||+.|||||||||+||||||+++...+ .+++++|+|+++||+.||++||+|+++||||+||||||||||.||++|++
T Consensus 112 ~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 112 YSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred CchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 79999999999999999999998776554 45667789999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceeeeeEeEecCCcCCCCCCchhhHHHHHHcCCCCHHHHHHHhccCCCCCccCCCCCCCCchHHHHHHHHHHH
Q 018190 81 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI 160 (359)
Q Consensus 81 ~n~~~~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~ 160 (359)
+|++....+||||||+|||||+||..|..++.+|++.+|+|++++++++++.|...... ....+..|.+++++....
T Consensus 191 ~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~---~~~~~~~C~~~i~~~~~~ 267 (437)
T PLN02209 191 GNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFS---VDPSNKKCLKLVEEYHKC 267 (437)
T ss_pred hcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhccccccc---CCCChHHHHHHHHHHHHH
Confidence 88654456899999999999999999999999999999999999999999998632111 112346799888765433
Q ss_pred hcCCCCccccccccCCCchHHHHHHHhhhhhccccCcccccc---hhhHhhcCchHHHHhhCCCCCCCcccccccccccc
Q 018190 161 VGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDVCMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLN 237 (359)
Q Consensus 161 ~~~~~~~yd~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~~~ 237 (359)
. ..++.|++....|..... ......|.. ..+..|||+++||+||||+.... ..|..|+..+.
T Consensus 268 ~-~~~~~~~~~~~~c~~~~~-------------~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~~~~~~~ 332 (437)
T PLN02209 268 T-DNINSHHTLIANCDDSNT-------------QHISPDCYYYPYHLVECWANNESVREALHVDKGSI-GEWIRDHRGIP 332 (437)
T ss_pred h-hcCCcccccccccccccc-------------ccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCC-CCCccccchhh
Confidence 2 246777655555643210 011234532 24789999999999999974322 47999987553
Q ss_pred ccCCCCCCChHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeE
Q 018190 238 YSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLT 317 (359)
Q Consensus 238 ~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Lt 317 (359)
+ ..|.+. +.+.+-.+|.+|+|||||+||.|++||+.|+++|+++|+ +....+|++|+++++++||+|+|+|+||
T Consensus 333 ~-~~d~~~-~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~----w~~~~~~~~w~~~~q~aG~vk~y~n~Lt 406 (437)
T PLN02209 333 Y-KSDIRS-SIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLN----YSIIDDWRPWMIKGQIAGYTRTYSNKMT 406 (437)
T ss_pred c-ccchhh-hHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcC----CccCCCeeeeEECCEeeeEEEEeCCceE
Confidence 3 245543 344344455679999999999999999999999999885 4445679999999999999999984499
Q ss_pred EEEEcCCCCCCCCCChHHHHHHHHHHhcCCCC
Q 018190 318 FVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 349 (359)
Q Consensus 318 f~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 349 (359)
|++|+||||||| +||++|++||++||.|++|
T Consensus 407 fv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 407 FATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred EEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 999999999998 7999999999999999875
No 5
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.8e-78 Score=590.21 Aligned_cols=327 Identities=35% Similarity=0.605 Sum_probs=258.9
Q ss_pred CCcccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 1 ysW~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
||||+.||||||||||||||||+++...+..+++++|+++++||+.||++||+++++||||+||||||||||.||.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 79999999999999999999999888767789999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceeeeeEeEecCCcCCCCCCchhhHHHHHHcCCCCHHHHHHHhccCCCCCccCCCCCCCCchHHHHHHHHHHH
Q 018190 81 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI 160 (359)
Q Consensus 81 ~n~~~~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~ 160 (359)
+|..+..+.||||||+|||||+||..|..++.+|++.+|+|++++++.+.+.|..... .......|.+++..+...
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~----~~~~~~~c~~~~~~~~~~ 235 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQ----CQKAITECAAALDELSCQ 235 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHS----SSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcccc----ccchhhHHHHHHHhhhhh
Confidence 9987545689999999999999999999999999999999999999999988864310 113456899888887653
Q ss_pred -----hcCCCCccccccccCCCchHHHHHHHhhhhhccccCcccccchhhHhhcCchHHHHhhCCCCCCCcccccccccc
Q 018190 161 -----VGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGV 235 (359)
Q Consensus 161 -----~~~~~~~yd~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~ 235 (359)
....+|+||++..+|... ..........+++....+..|||+++||++|||+.... .+|+.|+..
T Consensus 236 ~~~~~~~~~~n~Ydi~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~-~~w~~~~~~ 305 (415)
T PF00450_consen 236 YAISQCNGGINPYDIRQPCYNPS---------RSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSN-VNWQSCNDA 305 (415)
T ss_dssp CHHHHHHTTSETTSTTSEETT-S---------HCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTS-SS--SB-HH
T ss_pred cccccccCCcceeeeeccccccc---------cccccccccccccchhhHHHHhccHHHHHhhCCCcccC-CcccccCcc
Confidence 124799999987654311 00001111122223346899999999999999973222 589999997
Q ss_pred c-ccc-CCCCCCChHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCccccccccee--CCeeeEEEEE
Q 018190 236 L-NYS-DTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFH--KQQVGGWGTE 311 (359)
Q Consensus 236 ~-~~~-~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~--~~~~~G~~k~ 311 (359)
+ ... ..|.+.++.+.++.||++++|||||+||.|++||+.|+++|+++|+ +....+|+.|.. +++++||+|+
T Consensus 306 V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~----w~~~~~f~~~~~~~~~~~~G~~k~ 381 (415)
T PF00450_consen 306 VNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLN----WSGKDGFRQWPRKVNGQVAGYVKQ 381 (415)
T ss_dssp HHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTE----CTEEEEEEEEEEETTCSEEEEEEE
T ss_pred cccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccc----cCcccccccccccccccccceeEE
Confidence 7 222 3677889999999999999999999999999999999999999874 444567888876 8999999999
Q ss_pred eCCeeEEEEEcCCCCCCCCCChHHHHHHHHHHhcC
Q 018190 312 YGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHG 346 (359)
Q Consensus 312 ~~n~Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~ 346 (359)
++| |||++|++||||||+|||++|++||++||.|
T Consensus 382 ~~~-ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 382 YGN-LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp ETT-EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred ecc-EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 999 9999999999999999999999999999986
No 6
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.2e-73 Score=557.59 Aligned_cols=322 Identities=26% Similarity=0.473 Sum_probs=269.0
Q ss_pred CCcccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 1 ysW~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
||||+.+||||||||+||||||++.. ++..+++++|+|+++||+.||++||++++++|||+||||||+|+|.+|.+|++
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~ 194 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINM 194 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHh
Confidence 79999999999999999999998654 45678899999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceeeeeEeEecCCcCCCCCCchhhHHHHHH-------cCCCCHHHHHHHhc---cCCCCCccCCCC--CCCCc
Q 018190 81 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWS-------HGMISDEIGLTIMS---DCDFDDYVSGTS--HNMTN 148 (359)
Q Consensus 81 ~n~~~~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~c~~~~~~~~~~--~~~~~ 148 (359)
+|+.+.+++||||||+|||||+||..|+.++.+|+|. +|+|++++++++.+ .|... ...... .....
T Consensus 195 ~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~-~~~c~~~~~~~~~ 273 (462)
T PTZ00472 195 GNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKK-IKECNSNPDDADS 273 (462)
T ss_pred hccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHH-HHhccccCCCcch
Confidence 9986656789999999999999999999999999996 48999999988864 34210 000000 01223
Q ss_pred hHHHHHHHHHHHh----cCCCCccccccccCCCchHHHHHHHhhhhhccccCcccccc-hhhHhhcCchHHHHhhCCCCC
Q 018190 149 SCIEAITEANKIV----GDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDVCMT-LERFFYLNLPEVQKALHANRT 223 (359)
Q Consensus 149 ~C~~~~~~~~~~~----~~~~~~yd~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~-~~~~~ylN~~~V~~aL~v~~~ 223 (359)
.|..+...|.... ...+|+||++.. |.. +.|.. ..+..|||+++||+||||+.
T Consensus 274 ~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~--------------------~~c~~~~~~~~yLN~~~Vq~AL~v~~- 331 (462)
T PTZ00472 274 SCSVARALCNEYIAVYSATGLNNYDIRKP-CIG--------------------PLCYNMDNTIAFMNREDVQSSLGVKP- 331 (462)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhheecc-CCC--------------------CCccCHHHHHHHhCCHHHHHHhCCCC-
Confidence 5655554443211 235789999854 521 34543 35899999999999999963
Q ss_pred CCccccccccccccccC-CCCCCChHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcC-CCcccccccc-e
Q 018190 224 NLPYGWSMCSGVLNYSD-TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLN-FEVTVPYGAW-F 300 (359)
Q Consensus 224 ~~~~~w~~cs~~~~~~~-~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~-~~~~~~~~~w-~ 300 (359)
..|+.|+..+...+ .|.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|... -..+++|++| .
T Consensus 332 ---~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~ 408 (462)
T PTZ00472 332 ---ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSA 408 (462)
T ss_pred ---CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEe
Confidence 47999999886655 6888889999999999999999999999999999999999999998632 2246889999 5
Q ss_pred eCCeeeEEEEEeC-----CeeEEEEEcCCCCCCCCCChHHHHHHHHHHhcCCCCC
Q 018190 301 HKQQVGGWGTEYG-----NLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLP 350 (359)
Q Consensus 301 ~~~~~~G~~k~~~-----n~Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~ 350 (359)
++++++||+|+++ | |+|++|++||||||+|||+++++||++|+.|++++
T Consensus 409 ~~~~v~G~vk~~~~~~~~~-l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 409 VDGRWAGLVRSAASNTSSG-FSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred cCCEeceEEEEEecccCCC-eEEEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 6889999999999 8 99999999999999999999999999999998763
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-57 Score=400.36 Aligned_cols=336 Identities=21% Similarity=0.295 Sum_probs=263.4
Q ss_pred CCcccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 1 ysW~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
++|-+.|+|||||.|||+||||.+..+.|+++++++|.|+.+.|+.||..||+|+.+||||+-|||||+..|.+|..+.+
T Consensus 66 ~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~ 145 (414)
T KOG1283|consen 66 WTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDD 145 (414)
T ss_pred chhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceeeeeEeEecCCcCCCCCCchhhHHHHHHcCCCCHHHHHHHhc---cCCCCCccCCCCCCCCchHHHHHHHH
Q 018190 81 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMS---DCDFDDYVSGTSHNMTNSCIEAITEA 157 (359)
Q Consensus 81 ~n~~~~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~~gli~~~~~~~~~~---~c~~~~~~~~~~~~~~~~C~~~~~~~ 157 (359)
..+++ +++.|+.|+++|++||+|..-+.++.+|++..+++|+..++...+ .|... ..++.+..++ .|..-.+.+
T Consensus 146 aIk~G-~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~-v~~g~~~~AT-~~Wg~~e~l 222 (414)
T KOG1283|consen 146 AIKRG-EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGG-VDGGKWGGAT-GGWGGGENL 222 (414)
T ss_pred HHhcC-ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhccc-ccCCcccccc-ccccCcCcc
Confidence 98876 688999999999999999999999999999999999988876643 34311 1111222222 343333332
Q ss_pred HHHhcCCCCccccccccCCCchHHHHHH-Hhhh--hhccccCcc-cccchhhHhhcCchHHHHhhCCCCCCCcccccccc
Q 018190 158 NKIVGDYINNYDVILDVCYPTIVEQELR-LRKM--ATKMSVGVD-VCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCS 233 (359)
Q Consensus 158 ~~~~~~~~~~yd~~~~~c~~~~~~~~~~-~~~~--~~~~~~~~~-~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs 233 (359)
....++.+|.|++..+.........+.+ ..+. .+..+.... +-..+.++++||-| ||++|+|.+.++ .|-..+
T Consensus 223 i~~~sn~VdfYNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~--~wGgqs 299 (414)
T KOG1283|consen 223 ISRESNGVDFYNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGV--KWGGQS 299 (414)
T ss_pred eeecccCcceeeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCCC--cccCcC
Confidence 2222347899999765443322111111 0110 000000000 00123589999998 999999987664 899888
Q ss_pred ccccccC-CCCCCChHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhc--CCCcccccccceeCCeeeEEEE
Q 018190 234 GVLNYSD-TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDL--NFEVTVPYGAWFHKQQVGGWGT 310 (359)
Q Consensus 234 ~~~~~~~-~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~--~~~~~~~~~~w~~~~~~~G~~k 310 (359)
..+.-.+ .|+|+|....+.+||++|++|.||||++|.||++.|+++|+..|.|.. .|. ..+|...+++-..+||.|
T Consensus 300 g~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~-~~~r~~~~~s~~l~gy~k 378 (414)
T KOG1283|consen 300 GDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQ-VSPRVGITVSRVLEGYEK 378 (414)
T ss_pred CchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccc-cceeeeccceeecchhhh
Confidence 7765444 899999999999999999999999999999999999999999999863 343 345555556677899999
Q ss_pred EeCCeeEEEEEcCCCCCCCCCChHHHHHHHHHHh
Q 018190 311 EYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFV 344 (359)
Q Consensus 311 ~~~n~Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl 344 (359)
.|+| |.|.+|..||||||.|+|+.|.+|++.+.
T Consensus 379 tykn-l~f~wilraghmvp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 379 TYKN-LSFFWILRAGHMVPADNPAAASHMLRHVT 411 (414)
T ss_pred hhcc-ceeEEeecccCcccCCCHHHHhhheeecc
Confidence 9999 99999999999999999999999998654
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-50 Score=377.51 Aligned_cols=324 Identities=23% Similarity=0.345 Sum_probs=249.4
Q ss_pred CCcccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCC--ceEEEcccccceehHHHHHHH
Q 018190 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSR--ELFLTGESYAGHYIPQLADVL 78 (359)
Q Consensus 1 ysW~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~--~~yi~GESYgG~yvP~la~~i 78 (359)
+||+.++||||||||+|||||++ ...+.+.+-..+.+|++.|++.||+.||++.+. |+||+||||||+|+|.||.+|
T Consensus 141 ~SW~~~adLvFiDqPvGTGfS~a-~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 141 GSWLDFADLVFIDQPVGTGFSRA-LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred cccccCCceEEEecCcccCcccc-cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 69999999999999999999997 233345677788999999999999999999887 999999999999999999999
Q ss_pred HhhhcCCCCceeeeeEeEecCC-cCCCCCCchhhHHHHHHc----CCCCHHHHHHHhccCCCCCc---cCCCCC-CCCch
Q 018190 79 LDHNAHSKGFKFNIKGVAIGNP-LLRLDQDVPAIYEFFWSH----GMISDEIGLTIMSDCDFDDY---VSGTSH-NMTNS 149 (359)
Q Consensus 79 ~~~n~~~~~~~inLkGi~IGng-~~~p~~~~~~~~~~~~~~----gli~~~~~~~~~~~c~~~~~---~~~~~~-~~~~~ 149 (359)
+++|... .-.+||++++|||| +|+|..|+..|..++... +.++.+.++++++.|..... ...++. .....
T Consensus 220 ~~~~~~~-~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~ 298 (498)
T COG2939 220 LEDNIAL-NGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQP 298 (498)
T ss_pred HHhcccc-CCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhH
Confidence 9986322 23699999999999 999999999999999864 45677888888887764321 112222 33456
Q ss_pred HHHHHHHHHHHh--------cCCCCccccccccCCCchHHHHHHHhhhhhccccCcccccch--hhHhhcCchHHHHhhC
Q 018190 150 CIEAITEANKIV--------GDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDVCMTL--ERFFYLNLPEVQKALH 219 (359)
Q Consensus 150 C~~~~~~~~~~~--------~~~~~~yd~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~~--~~~~ylN~~~V~~aL~ 219 (359)
|..+...|.... +++.|.|+++.. |.... -.-.|+.. ...+|++...+++.++
T Consensus 299 c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g----------------~~~~~y~~~~~~ld~~~~~~~~~~~~ 361 (498)
T COG2939 299 CENASAYLTGLMREYVGRAGGRLLNVYDIREE-CRDPG----------------LGGSCYDTLSTSLDYFNFDPEQEVND 361 (498)
T ss_pred HHHHHHHHHhcchhhhccccccccccccchhh-cCCCC----------------cccccccceeeccccccccchhcccc
Confidence 877776665321 234788888754 42110 01134332 4677888777888886
Q ss_pred CCCCCCccccccccccccccC----CCCCCChHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHh--cCCCcc
Q 018190 220 ANRTNLPYGWSMCSGVLNYSD----TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARD--LNFEVT 293 (359)
Q Consensus 220 v~~~~~~~~w~~cs~~~~~~~----~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~--~~~~~~ 293 (359)
... ..|..|+..+...+ .+++.+....+..++.+++.+++|.|+.|.+|++.|++.|..+|+|. .++.-
T Consensus 362 ~~~----d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d- 436 (498)
T COG2939 362 PEV----DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFD- 436 (498)
T ss_pred ccc----cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhh-
Confidence 532 47999998764332 67788888889999999999999999999999999999999999874 34442
Q ss_pred ccccccee--CCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHHHHHHHHhcCCCC
Q 018190 294 VPYGAWFH--KQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 349 (359)
Q Consensus 294 ~~~~~w~~--~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 349 (359)
+.-.+|.. ..+..|-.++++| |+|++++.||||||+|+|+.+++|++.|+.+...
T Consensus 437 ~~~~~~~~~~t~e~~~~~~s~~n-~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~~ 493 (498)
T COG2939 437 ASTPFFWSRLTLEEMGGYKSYRN-LTFLRIYEAGHMVPYDRPESSLEMVNLWINGYGA 493 (498)
T ss_pred hcCCCcccccchhhcccccccCC-ceEEEEecCcceeecCChHHHHHHHHHHHhhccc
Confidence 22233332 4455566667778 9999999999999999999999999999988543
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.74 E-value=6.6e-07 Score=82.86 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=47.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++|||..|+.|.+++.......+.+. + .+ .++..|.+|||+++.++|+...
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~-----i----------------------p~-~~~~~i~~aGH~~~~e~Pe~~~ 278 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRAT-----F----------------------PD-HVLVELPNAKHFIQEDAPDRIA 278 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHh-----c----------------------CC-CeEEEcCCCcccccccCHHHHH
Confidence 799999999999988765443333211 1 22 6788999999999999999999
Q ss_pred HHHHHHhc
Q 018190 338 HLFSSFVH 345 (359)
Q Consensus 338 ~mi~~fl~ 345 (359)
++|.+|+.
T Consensus 279 ~~i~~~~~ 286 (286)
T PRK03204 279 AAIIERFG 286 (286)
T ss_pred HHHHHhcC
Confidence 99999973
No 10
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.55 E-value=2.3e-06 Score=77.94 Aligned_cols=59 Identities=24% Similarity=0.357 Sum_probs=48.6
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++|||..|+.|.++|....+.+.+.+ .+ ..++.+.++||+++.++|+...
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~~~ 270 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRV----------------------------PT-ATLHVVPGGGHLVHEEQADGVV 270 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhc----------------------------cC-CeEEEECCCCCcccccCHHHHH
Confidence 689999999999999987766665422 11 4457779999999999999999
Q ss_pred HHHHHHhc
Q 018190 338 HLFSSFVH 345 (359)
Q Consensus 338 ~mi~~fl~ 345 (359)
+.|.+|+.
T Consensus 271 ~~i~~f~~ 278 (278)
T TIGR03056 271 GLILQAAE 278 (278)
T ss_pred HHHHHHhC
Confidence 99999974
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.50 E-value=2e-06 Score=76.90 Aligned_cols=59 Identities=20% Similarity=0.258 Sum_probs=48.8
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++|||.+|+.|.+||....+.+.+.+ .+ -.+..+.++||+.+.++|+...
T Consensus 198 ~~P~l~i~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~~~~~~ 248 (257)
T TIGR03611 198 QHPVLLIANRDDMLVPYTQSLRLAAAL----------------------------PN-AQLKLLPYGGHASNVTDPETFN 248 (257)
T ss_pred CccEEEEecCcCcccCHHHHHHHHHhc----------------------------CC-ceEEEECCCCCCccccCHHHHH
Confidence 689999999999999988766655422 12 4567789999999999999999
Q ss_pred HHHHHHhc
Q 018190 338 HLFSSFVH 345 (359)
Q Consensus 338 ~mi~~fl~ 345 (359)
+.|.+||.
T Consensus 249 ~~i~~fl~ 256 (257)
T TIGR03611 249 RALLDFLK 256 (257)
T ss_pred HHHHHHhc
Confidence 99999984
No 12
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.49 E-value=1.3e-05 Score=72.78 Aligned_cols=63 Identities=17% Similarity=0.349 Sum_probs=46.9
Q ss_pred HHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCC
Q 018190 253 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 332 (359)
Q Consensus 253 ~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq 332 (359)
.|..-+++||+..|+.|.+ +....+.+.+.+ .+ -.++.+.++||+++.++
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~ 275 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELI----------------------------AG-SRLVVFPDGSHMTMIED 275 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhc----------------------------cC-CeEEEeCCCCCCcccCC
Confidence 3434479999999999985 444444444321 11 45677889999999999
Q ss_pred hHHHHHHHHHHhc
Q 018190 333 PSRALHLFSSFVH 345 (359)
Q Consensus 333 P~~a~~mi~~fl~ 345 (359)
|+...+.|.+|+.
T Consensus 276 p~~~~~~i~~fl~ 288 (288)
T TIGR01250 276 PEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999984
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.46 E-value=2.1e-05 Score=72.14 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=49.3
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-.++||+..|..|.+++..-.+.+.+.+ .+ ..++.|.+|||+++.++|+..
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~----------------------------~~-~~~~~i~~agH~~~~e~p~~~ 272 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNM----------------------------PD-AQLHVFSRCGHWAQWEHADAF 272 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhC----------------------------CC-CEEEEeCCCCcCCcccCHHHH
Confidence 3689999999999999976555544421 12 667889999999999999999
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
.++|..||.
T Consensus 273 ~~~i~~fl~ 281 (282)
T TIGR03343 273 NRLVIDFLR 281 (282)
T ss_pred HHHHHHHhh
Confidence 999999985
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=98.45 E-value=1.3e-05 Score=73.49 Aligned_cols=82 Identities=15% Similarity=0.133 Sum_probs=53.9
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
..++-+|.| |.|.|...... ..+-....+|+..+|..+-+.+ ...+++|.|+|.|| .+|..+....
T Consensus 53 ~~via~D~~-G~G~S~~~~~~--~~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG----~ia~~~a~~~---- 118 (276)
T PHA02857 53 ILVFSHDHI-GHGRSNGEKMM--IDDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGA----TISILAAYKN---- 118 (276)
T ss_pred CEEEEccCC-CCCCCCCccCC--cCCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchH----HHHHHHHHhC----
Confidence 579999999 99999542211 1122334566666665554444 35789999999999 4555544332
Q ss_pred CceeeeeEeEecCCcCCC
Q 018190 87 GFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~p 104 (359)
+-+++|+++.+|.+++
T Consensus 119 --p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 119 --PNLFTAMILMSPLVNA 134 (276)
T ss_pred --ccccceEEEecccccc
Confidence 1258999999987763
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.43 E-value=6.3e-06 Score=76.37 Aligned_cols=60 Identities=23% Similarity=0.338 Sum_probs=48.6
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++|||+.|..|.++|....+. +.++ . .+ ..++.+.+|||+++.++|+...
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~-~~~~------~---------------------~~-~~~~~i~~~gH~~~~e~p~~~~ 284 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRA-YANF------D---------------------AV-EDFIVLPGVGHCPQDEAPELVN 284 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHH-HHhc------C---------------------Cc-cceEEeCCCCCChhhhCHHHHH
Confidence 7899999999999999876655 3321 0 11 4567889999999999999999
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
+.|.+|+.+
T Consensus 285 ~~i~~fl~~ 293 (294)
T PLN02824 285 PLIESFVAR 293 (294)
T ss_pred HHHHHHHhc
Confidence 999999964
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.39 E-value=1.6e-05 Score=74.05 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=50.8
Q ss_pred HHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCC
Q 018190 253 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 332 (359)
Q Consensus 253 ~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq 332 (359)
.|-+-.++|||..|..|.+++... +.+.+.+ . .. .+ ..+..+.++||+++.++
T Consensus 234 ~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~------~-~~------------------~~-~~~~~i~~~gH~~~~e~ 286 (302)
T PRK00870 234 VLERWDKPFLTAFSDSDPITGGGD-AILQKRI------P-GA------------------AG-QPHPTIKGAGHFLQEDS 286 (302)
T ss_pred hhhcCCCceEEEecCCCCcccCch-HHHHhhc------c-cc------------------cc-cceeeecCCCccchhhC
Confidence 344457999999999999999754 4333211 0 00 11 45678899999999999
Q ss_pred hHHHHHHHHHHhcCCC
Q 018190 333 PSRALHLFSSFVHGRR 348 (359)
Q Consensus 333 P~~a~~mi~~fl~~~~ 348 (359)
|+.....|..|+...+
T Consensus 287 p~~~~~~l~~fl~~~~ 302 (302)
T PRK00870 287 GEELAEAVLEFIRATP 302 (302)
T ss_pred hHHHHHHHHHHHhcCC
Confidence 9999999999997643
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.39 E-value=5.4e-06 Score=74.74 Aligned_cols=60 Identities=17% Similarity=0.268 Sum_probs=48.8
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
..+||+..|+.|..++....+.+.+.+ .+ .++..+.++||+.+.++|+...
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~p~~~~ 245 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQF----------------------------PQ-ARAHVIAGAGHWVHAEKPDAVL 245 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhC----------------------------CC-cEEEEeCCCCCeeeccCHHHHH
Confidence 589999999999988865555444311 22 6778899999999999999999
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
+.+.+||..
T Consensus 246 ~~l~~fl~~ 254 (255)
T PRK10673 246 RAIRRYLND 254 (255)
T ss_pred HHHHHHHhc
Confidence 999999964
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.35 E-value=1.2e-05 Score=76.73 Aligned_cols=84 Identities=20% Similarity=0.253 Sum_probs=56.8
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
-.+|+-+|.| |.|.|-... .+..+-+..++|+..+++.. ..-+++...+++|.|+|.|| .+|..+..+..
T Consensus 115 g~~v~~~D~~-G~G~S~~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG----~val~~a~~~p-- 184 (349)
T PLN02385 115 GYGVFAMDYP-GFGLSEGLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGG----AVALKVHLKQP-- 184 (349)
T ss_pred CCEEEEecCC-CCCCCCCCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccch----HHHHHHHHhCc--
Confidence 3689999999 999985422 22224455677777776553 33345556789999999999 56665554432
Q ss_pred CCceeeeeEeEecCCcCC
Q 018190 86 KGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~~ 103 (359)
-.++|+++.+|...
T Consensus 185 ----~~v~glVLi~p~~~ 198 (349)
T PLN02385 185 ----NAWDGAILVAPMCK 198 (349)
T ss_pred ----chhhheeEeccccc
Confidence 25789999887653
No 19
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.34 E-value=3.2e-05 Score=74.05 Aligned_cols=64 Identities=23% Similarity=0.411 Sum_probs=50.3
Q ss_pred CccEEEEecCCCcccCchhH-HHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGS-RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~-~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
.++|||..|+.|.++|..+. ..+++.+.. ...+ .++.+|.+|||+++.++|++.
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~~------------------------~ip~-~~l~~i~~aGH~~~~E~Pe~~ 346 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLPS------------------------QLPN-VTLYVLEGVGHCPHDDRPDLV 346 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhhc------------------------cCCc-eEEEEcCCCCCCccccCHHHH
Confidence 69999999999999998753 234443310 1123 677889999999999999999
Q ss_pred HHHHHHHhcC
Q 018190 337 LHLFSSFVHG 346 (359)
Q Consensus 337 ~~mi~~fl~~ 346 (359)
.+.|.+|+..
T Consensus 347 ~~~I~~FL~~ 356 (360)
T PLN02679 347 HEKLLPWLAQ 356 (360)
T ss_pred HHHHHHHHHh
Confidence 9999999964
No 20
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.31 E-value=4.3e-05 Score=72.12 Aligned_cols=85 Identities=20% Similarity=0.252 Sum_probs=56.9
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
-.+|+-+|+| |.|.|.... .+..+-+..++|+..+++..... .++...+++|.|+|.||. +|..+..+..
T Consensus 87 Gy~V~~~D~r-GhG~S~~~~--~~~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~----ia~~~a~~~p-- 156 (330)
T PLN02298 87 GFACFALDLE-GHGRSEGLR--AYVPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGA----ICLLIHLANP-- 156 (330)
T ss_pred CCEEEEecCC-CCCCCCCcc--ccCCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhH----HHHHHHhcCc--
Confidence 3799999999 999985322 22234456688888887655432 234455899999999994 4444443321
Q ss_pred CCceeeeeEeEecCCcCCC
Q 018190 86 KGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~~p 104 (359)
-.++|+++.+|+...
T Consensus 157 ----~~v~~lvl~~~~~~~ 171 (330)
T PLN02298 157 ----EGFDGAVLVAPMCKI 171 (330)
T ss_pred ----ccceeEEEecccccC
Confidence 258999999987653
No 21
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.26 E-value=2.1e-06 Score=74.78 Aligned_cols=81 Identities=20% Similarity=0.260 Sum_probs=52.7
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+..+++.+|.| |.|.|..... .-..+-++.+++ +..+++.... .+++|.|+|+|| .+|..++.+..
T Consensus 23 ~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~----l~~~l~~~~~---~~~~lvG~S~Gg----~~a~~~a~~~p- 88 (228)
T PF12697_consen 23 RGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED----LAELLDALGI---KKVILVGHSMGG----MIALRLAARYP- 88 (228)
T ss_dssp TTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH----HHHHHHHTTT---SSEEEEEETHHH----HHHHHHHHHSG-
T ss_pred CCCEEEEEecC-Cccccccccc-cCCcchhhhhhh----hhhccccccc---cccccccccccc----ccccccccccc-
Confidence 45789999999 9999975432 001232334444 4455554432 689999999999 44544444432
Q ss_pred CCCceeeeeEeEecCCcCCC
Q 018190 85 SKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~~~p 104 (359)
-.++|+++-+|....
T Consensus 89 -----~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 89 -----DRVKGLVLLSPPPPL 103 (228)
T ss_dssp -----GGEEEEEEESESSSH
T ss_pred -----cccccceeecccccc
Confidence 268999999988753
No 22
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.26 E-value=1e-05 Score=74.29 Aligned_cols=61 Identities=21% Similarity=0.435 Sum_probs=48.2
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++|||..|+.|-++|....+...+.+ .+ .+++.+. +|||.+.++|+...
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~----------------------------~~-~~~~~i~-~gH~~~~e~p~~~~ 256 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRI----------------------------PN-AELHIID-DGHLFLITRAEAVA 256 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhC----------------------------CC-CEEEEEc-CCCchhhccHHHHH
Confidence 689999999999999987766554421 11 4556665 59999999999999
Q ss_pred HHHHHHhcCCC
Q 018190 338 HLFSSFVHGRR 348 (359)
Q Consensus 338 ~mi~~fl~~~~ 348 (359)
+.|.+|+.+..
T Consensus 257 ~~i~~fl~~~~ 267 (276)
T TIGR02240 257 PIIMKFLAEER 267 (276)
T ss_pred HHHHHHHHHhh
Confidence 99999997543
No 23
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.25 E-value=1.7e-05 Score=73.56 Aligned_cols=64 Identities=13% Similarity=0.247 Sum_probs=50.8
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++|||.+|+.|.+++......++..+. .+ .++..+.+|||+++.++|+...
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~~~gH~~~~e~p~~v~ 279 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSWP---------------------------NQ-LEITVFGAGLHFAQEDSPEEIG 279 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHhh---------------------------hh-cceeeccCcchhhhhcCHHHHH
Confidence 7899999999999997666666665321 12 4566778999999999999999
Q ss_pred HHHHHHhcCCCC
Q 018190 338 HLFSSFVHGRRL 349 (359)
Q Consensus 338 ~mi~~fl~~~~~ 349 (359)
+.|..|+.....
T Consensus 280 ~~i~~fl~~~~~ 291 (295)
T PRK03592 280 AAIAAWLRRLRL 291 (295)
T ss_pred HHHHHHHHHhcc
Confidence 999999975443
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.21 E-value=2.1e-05 Score=69.69 Aligned_cols=60 Identities=25% Similarity=0.383 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-.++||+.+|..|.++|....+.+.+.+ .+ .++..+.++||+++.++|+..
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~p~~~ 242 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLV----------------------------PG-ARFAEIRGAGHIPCVEQPEAF 242 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhC----------------------------CC-ceEEEECCCCCcccccChHHH
Confidence 3689999999999999987555544321 12 567888999999999999999
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
.+.++.|+.
T Consensus 243 ~~~i~~fl~ 251 (251)
T TIGR02427 243 NAALRDFLR 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999974
No 25
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.19 E-value=0.00015 Score=67.26 Aligned_cols=85 Identities=16% Similarity=0.316 Sum_probs=61.9
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+.-||-.||+| |-|+|--.. +..+.+..-..|.+-+.+|.... .+ .+.+|.|+|+|| +||..-.-+..+
T Consensus 115 ~~~~vyaiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~-~L--~KmilvGHSfGG----YLaa~YAlKyPe 183 (365)
T KOG4409|consen 115 KIRNVYAIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKM-GL--EKMILVGHSFGG----YLAAKYALKYPE 183 (365)
T ss_pred hcCceEEeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHc-CC--cceeEeeccchH----HHHHHHHHhChH
Confidence 45689999999 999995422 33343444457888999999876 33 389999999999 887776655432
Q ss_pred CCCceeeeeEeEecCCcCCCCC
Q 018190 85 SKGFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~~~p~~ 106 (359)
.++-+++.+||--|..
T Consensus 184 ------rV~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 184 ------RVEKLILVSPWGFPEK 199 (365)
T ss_pred ------hhceEEEecccccccC
Confidence 4788999999976653
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.09 E-value=0.00012 Score=70.55 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=48.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++|||..|+.|.+++....+.+.+.. + .++++|.+|||+++.++|++..
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~~-----------------------------~-a~l~vIp~aGH~~~~E~Pe~v~ 374 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKSS-----------------------------Q-HKLIELPMAGHHVQEDCGEELG 374 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHhc-----------------------------C-CeEEEECCCCCCcchhCHHHHH
Confidence 689999999999998887666554410 1 4568899999999999999999
Q ss_pred HHHHHHhc
Q 018190 338 HLFSSFVH 345 (359)
Q Consensus 338 ~mi~~fl~ 345 (359)
+.|.+|+.
T Consensus 375 ~~I~~Fl~ 382 (383)
T PLN03084 375 GIISGILS 382 (383)
T ss_pred HHHHHHhh
Confidence 99999985
No 27
>PLN02578 hydrolase
Probab=98.09 E-value=0.00016 Score=69.03 Aligned_cols=76 Identities=20% Similarity=0.173 Sum_probs=51.6
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+..+++-+|.| |.|.|-... .. .+.+..++++.+|++... ..+++|.|+|+|| .+|..+..+..
T Consensus 111 ~~~~v~~~D~~-G~G~S~~~~-~~--~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg----~ia~~~A~~~p- 174 (354)
T PLN02578 111 KKYKVYALDLL-GFGWSDKAL-IE--YDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGG----FTALSTAVGYP- 174 (354)
T ss_pred cCCEEEEECCC-CCCCCCCcc-cc--cCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHH----HHHHHHHHhCh-
Confidence 45789999999 899885322 11 244445666666665432 4689999999999 56666655442
Q ss_pred CCCceeeeeEeEecCCc
Q 018190 85 SKGFKFNIKGVAIGNPL 101 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~ 101 (359)
-.++++++.|+.
T Consensus 175 -----~~v~~lvLv~~~ 186 (354)
T PLN02578 175 -----ELVAGVALLNSA 186 (354)
T ss_pred -----HhcceEEEECCC
Confidence 367899888764
No 28
>PRK10749 lysophospholipase L2; Provisional
Probab=98.08 E-value=0.00024 Score=67.22 Aligned_cols=84 Identities=14% Similarity=0.174 Sum_probs=55.2
Q ss_pred ccceEEEeCCCCcccccccCCC---CCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhh
Q 018190 6 ASNLLFVESPAGVGWSYSNTTS---DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~---~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n 82 (359)
-.+++-+|.| |.|.|...... ....+-+..++|+..+++.....+ ...+++|.|+|.|| .+|...+.+.
T Consensus 81 g~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG----~ia~~~a~~~ 152 (330)
T PRK10749 81 GYDVLIIDHR-GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGG----AILTLFLQRH 152 (330)
T ss_pred CCeEEEEcCC-CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHH----HHHHHHHHhC
Confidence 4689999999 99998532111 111233455667777776655433 34689999999999 5665544433
Q ss_pred cCCCCceeeeeEeEecCCcCC
Q 018190 83 AHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 83 ~~~~~~~inLkGi~IGng~~~ 103 (359)
. -.++|+++.+|...
T Consensus 153 p------~~v~~lvl~~p~~~ 167 (330)
T PRK10749 153 P------GVFDAIALCAPMFG 167 (330)
T ss_pred C------CCcceEEEECchhc
Confidence 2 24789999988764
No 29
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.01 E-value=0.00018 Score=68.07 Aligned_cols=62 Identities=16% Similarity=0.331 Sum_probs=48.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCC-hHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 336 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq-P~~a 336 (359)
.+++|+.+|..|.+++..+++.+.+++ .. .+ -++..+.+++|++..+. ++.+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~----~~----------------------~~-~~l~~~~g~~H~i~~E~~~~~v 322 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKL----SI----------------------SN-KELHTLEDMDHVITIEPGNEEV 322 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhc----cC----------------------CC-cEEEEECCCCCCCccCCCHHHH
Confidence 689999999999999999888877643 10 11 44567789999999885 6778
Q ss_pred HHHHHHHhcC
Q 018190 337 LHLFSSFVHG 346 (359)
Q Consensus 337 ~~mi~~fl~~ 346 (359)
++-+..||.+
T Consensus 323 ~~~i~~wL~~ 332 (332)
T TIGR01607 323 LKKIIEWISN 332 (332)
T ss_pred HHHHHHHhhC
Confidence 8888889864
No 30
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.97 E-value=0.00026 Score=67.67 Aligned_cols=58 Identities=26% Similarity=0.423 Sum_probs=46.7
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-.++||+.+|+.|.++|....+. + +++ .++..+.++||+...++|+..
T Consensus 313 i~~Pvlii~g~~D~~vp~~~~~~----l---------------------------~~~-~~~~~~~~~gH~~~~e~p~~~ 360 (371)
T PRK14875 313 LAIPVLVIWGEQDRIIPAAHAQG----L---------------------------PDG-VAVHVLPGAGHMPQMEAAADV 360 (371)
T ss_pred CCCCEEEEEECCCCccCHHHHhh----c---------------------------cCC-CeEEEeCCCCCChhhhCHHHH
Confidence 47899999999999998643211 1 123 677889999999999999999
Q ss_pred HHHHHHHhcC
Q 018190 337 LHLFSSFVHG 346 (359)
Q Consensus 337 ~~mi~~fl~~ 346 (359)
.+.|.+|+.+
T Consensus 361 ~~~i~~fl~~ 370 (371)
T PRK14875 361 NRLLAEFLGK 370 (371)
T ss_pred HHHHHHHhcc
Confidence 9999999964
No 31
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.94 E-value=0.0002 Score=69.36 Aligned_cols=85 Identities=19% Similarity=0.202 Sum_probs=57.9
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
-.+++-+|.| |-|.|-... .+..+.+..++|+..+++..-..+|+ .+++|+|+|.||. +|.....+.+.
T Consensus 163 Gy~V~~~D~r-GhG~S~~~~--~~~~~~~~~~~Dl~~~l~~l~~~~~~---~~i~lvGhSmGG~----ial~~a~~p~~- 231 (395)
T PLN02652 163 GFGVYAMDWI-GHGGSDGLH--GYVPSLDYVVEDTEAFLEKIRSENPG---VPCFLFGHSTGGA----VVLKAASYPSI- 231 (395)
T ss_pred CCEEEEeCCC-CCCCCCCCC--CCCcCHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECHHHH----HHHHHHhccCc-
Confidence 4589999999 999885432 22334456678888888877666653 4899999999994 44433332211
Q ss_pred CCceeeeeEeEecCCcCCC
Q 018190 86 KGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~~p 104 (359)
.-.++|+++.+|++..
T Consensus 232 ---~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 232 ---EDKLEGIVLTSPALRV 247 (395)
T ss_pred ---ccccceEEEECccccc
Confidence 1258899999988753
No 32
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.94 E-value=0.00016 Score=66.64 Aligned_cols=62 Identities=31% Similarity=0.439 Sum_probs=47.7
Q ss_pred hCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCee-EEEEEcCCCCCCCCCChH
Q 018190 256 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLL-TFVTVRGAAHMVPYAQPS 334 (359)
Q Consensus 256 ~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~L-tf~~V~~AGHmvP~dqP~ 334 (359)
+-.++|+++.|+.|.++++.......+.+ .++ | .-+.+.|+||.|++++|+
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk~---------vp~-------------------l~~~vv~~~~gH~vqqe~p~ 307 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRKD---------VPR-------------------LTERVVIEGIGHFVQQEKPQ 307 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHHh---------hcc-------------------ccceEEecCCcccccccCHH
Confidence 34689999999999999999433333221 121 2 347788999999999999
Q ss_pred HHHHHHHHHhc
Q 018190 335 RALHLFSSFVH 345 (359)
Q Consensus 335 ~a~~mi~~fl~ 345 (359)
+..+++..|+.
T Consensus 308 ~v~~~i~~f~~ 318 (322)
T KOG4178|consen 308 EVNQAILGFIN 318 (322)
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.85 E-value=0.00053 Score=66.70 Aligned_cols=81 Identities=15% Similarity=0.219 Sum_probs=52.5
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCc-hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhc
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGD-ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNA 83 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~-~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 83 (359)
+..+|+-+|.| |.|-|.... +..++ +++.+.+.+.+..|.+.. ...+++|.|+|+|| .+|..+..+.
T Consensus 130 ~~~~vi~~D~r-G~G~S~~~~---~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG----~la~~~a~~~- 197 (402)
T PLN02894 130 SRFRVIAIDQL-GWGGSSRPD---FTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGG----YVAAKYALKH- 197 (402)
T ss_pred hCCEEEEECCC-CCCCCCCCC---cccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHH----HHHHHHHHhC-
Confidence 45789999999 999884321 11122 333344556666666543 23479999999999 5666655443
Q ss_pred CCCCceeeeeEeEecCCcC
Q 018190 84 HSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 84 ~~~~~~inLkGi~IGng~~ 102 (359)
.-.++++++.++..
T Consensus 198 -----p~~v~~lvl~~p~~ 211 (402)
T PLN02894 198 -----PEHVQHLILVGPAG 211 (402)
T ss_pred -----chhhcEEEEECCcc
Confidence 23578888888764
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.79 E-value=0.00046 Score=60.76 Aligned_cols=59 Identities=24% Similarity=0.419 Sum_probs=43.1
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-..+||+.+|..|..++- ..+.+. . ...+ .+++++.++||+++.++|+..
T Consensus 193 ~~~P~l~i~g~~D~~~~~-----~~~~~~---~---------------------~~~~-~~~~~~~~~gH~~~~e~~~~~ 242 (251)
T TIGR03695 193 LTIPVLYLCGEKDEKFVQ-----IAKEMQ---K---------------------LLPN-LTLVIIANAGHNIHLENPEAF 242 (251)
T ss_pred CCCceEEEeeCcchHHHH-----HHHHHH---h---------------------cCCC-CcEEEEcCCCCCcCccChHHH
Confidence 468999999999976431 112111 0 0122 667888999999999999999
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
...|..|+.
T Consensus 243 ~~~i~~~l~ 251 (251)
T TIGR03695 243 AKILLAFLE 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999983
No 35
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.61 E-value=0.0014 Score=57.66 Aligned_cols=93 Identities=13% Similarity=0.118 Sum_probs=61.0
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+-..|+.+|...+.||+..-........-....+|+..+++...+.. ......+.|.|.|||| ++|..+..+..
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG----~~a~~~~~~~~- 86 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGG----YLALLAATQHP- 86 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHH----HHHHHHHHHTC-
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccc----cccchhhcccc-
Confidence 45689999999888887642222211233456788888777776654 5556789999999999 55555544332
Q ss_pred CCCceeeeeEeEecCCcCCCCCCc
Q 018190 85 SKGFKFNIKGVAIGNPLLRLDQDV 108 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~~~p~~~~ 108 (359)
-.++.++.++|.+|+....
T Consensus 87 -----~~f~a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 87 -----DRFKAAVAGAGVSDLFSYY 105 (213)
T ss_dssp -----CGSSEEEEESE-SSTTCSB
T ss_pred -----eeeeeeeccceecchhccc
Confidence 2478999999998876543
No 36
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.59 E-value=0.0039 Score=57.34 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=55.0
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
.+++-+|.| |.|-|.... .+-+...+|+..+++.+-+..|.+ .++.+.|.|.|| .+|.......
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg----~~a~~~a~~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAA----SAALLYAPAD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHH----HHHHHHhhhC----
Confidence 689999999 999886422 133345677777777666666654 359999999999 4444443221
Q ss_pred CceeeeeEeEecCCcCCC
Q 018190 87 GFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~p 104 (359)
-.++|+++.||++..
T Consensus 122 ---~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVRT 136 (274)
T ss_pred ---CCccEEEEECCccCC
Confidence 258999999998653
No 37
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.59 E-value=0.0017 Score=61.25 Aligned_cols=60 Identities=30% Similarity=0.515 Sum_probs=50.1
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
+.+|||..|+.|.++|....+...++ ..| ..+..|.+|||.+..++|++.-
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~----------------------------~pn-~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK----------------------------LPN-AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh----------------------------CCC-ceEEEeCCCCcccccCCHHHHH
Confidence 47899999999999999844443331 123 8899999999999999999999
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
..|..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999964
No 38
>PLN02511 hydrolase
Probab=97.37 E-value=0.0016 Score=63.14 Aligned_cols=82 Identities=21% Similarity=0.259 Sum_probs=51.9
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+..+++-+|.| |.|-|-...... .....++|+..+++..-.++| +.++++.|.|.|| .++...+.+...
T Consensus 128 ~g~~vv~~d~r-G~G~s~~~~~~~---~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg----~i~~~yl~~~~~ 196 (388)
T PLN02511 128 KGWRVVVFNSR-GCADSPVTTPQF---YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGA----NILVNYLGEEGE 196 (388)
T ss_pred CCCEEEEEecC-CCCCCCCCCcCE---EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhH----HHHHHHHHhcCC
Confidence 34689999998 888885432211 123456788888877776666 4689999999999 555544433322
Q ss_pred CCCceeeeeEeE-ecCCc
Q 018190 85 SKGFKFNIKGVA-IGNPL 101 (359)
Q Consensus 85 ~~~~~inLkGi~-IGng~ 101 (359)
...|++.+ |.+|+
T Consensus 197 ----~~~v~~~v~is~p~ 210 (388)
T PLN02511 197 ----NCPLSGAVSLCNPF 210 (388)
T ss_pred ----CCCceEEEEECCCc
Confidence 23466655 44443
No 39
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.18 E-value=0.0061 Score=55.72 Aligned_cols=80 Identities=23% Similarity=0.203 Sum_probs=59.4
Q ss_pred eEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCc
Q 018190 9 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGF 88 (359)
Q Consensus 9 vlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 88 (359)
+--+|++ |.|.|-+ ...|..+-+.+.+|...|+..+-. .+++++.|.|++|||-|| +++-.+..+..
T Consensus 85 v~a~D~~-GhG~SdG--l~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGG----AV~Ll~~~k~p----- 151 (313)
T KOG1455|consen 85 VYAIDYE-GHGRSDG--LHAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGG----AVALLIALKDP----- 151 (313)
T ss_pred EEEeecc-CCCcCCC--CcccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcch----HHHHHHHhhCC-----
Confidence 5568998 9999964 345667778888898887776654 458889999999999999 78877766532
Q ss_pred eeeeeEeEecCCcC
Q 018190 89 KFNIKGVAIGNPLL 102 (359)
Q Consensus 89 ~inLkGi~IGng~~ 102 (359)
--..|+++..|+.
T Consensus 152 -~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 152 -NFWDGAILVAPMC 164 (313)
T ss_pred -cccccceeeeccc
Confidence 2356776666654
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.15 E-value=0.015 Score=66.26 Aligned_cols=75 Identities=15% Similarity=0.268 Sum_probs=49.8
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-..++||..|+.|.+++ .-.+.+.+.+... . +.. .+ ..... ..+++|.+|||+++.++|+..
T Consensus 1567 I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a--~----~~~---~~-------~~~~~-a~lvvI~~aGH~~~lE~Pe~f 1628 (1655)
T PLN02980 1567 CDTPLLLVVGEKDVKFK-QIAQKMYREIGKS--K----ESG---ND-------KGKEI-IEIVEIPNCGHAVHLENPLPV 1628 (1655)
T ss_pred CCCCEEEEEECCCCccH-HHHHHHHHHcccc--c----ccc---cc-------ccccc-eEEEEECCCCCchHHHCHHHH
Confidence 46899999999999875 2223333322100 0 000 00 00122 578899999999999999999
Q ss_pred HHHHHHHhcCCCC
Q 018190 337 LHLFSSFVHGRRL 349 (359)
Q Consensus 337 ~~mi~~fl~~~~~ 349 (359)
.+.|.+||.+..-
T Consensus 1629 ~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1629 IRALRKFLTRLHN 1641 (1655)
T ss_pred HHHHHHHHHhccc
Confidence 9999999987553
No 41
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.80 E-value=0.0037 Score=54.88 Aligned_cols=59 Identities=19% Similarity=0.138 Sum_probs=47.7
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-..+|||.+|..|.+++....+.+.+.+ .+ -++..+.++||+++.++|+..
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~~ 237 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLA----------------------------PH-SELYIFAKAAHAPFLSHAEAF 237 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCCccccCHHHH
Confidence 3689999999999999987766544321 12 456778899999999999999
Q ss_pred HHHHHHHh
Q 018190 337 LHLFSSFV 344 (359)
Q Consensus 337 ~~mi~~fl 344 (359)
.+.|..||
T Consensus 238 ~~~i~~fi 245 (245)
T TIGR01738 238 CALLVAFK 245 (245)
T ss_pred HHHHHhhC
Confidence 99999986
No 42
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.73 E-value=0.0043 Score=56.00 Aligned_cols=60 Identities=20% Similarity=0.177 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-.++|||..|..|.++|....+...+.+ .+ ..++.+.++||+++.++|+..
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~~~~~i----------------------------~~-~~~~~i~~~gH~~~~e~p~~f 245 (256)
T PRK10349 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLW----------------------------PH-SESYIFAKAAHAPFISHPAEF 245 (256)
T ss_pred cCCCeEEEecCCCccCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCCccccCHHHH
Confidence 4799999999999999877655433311 22 667889999999999999999
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
.+.+.+|-.
T Consensus 246 ~~~l~~~~~ 254 (256)
T PRK10349 246 CHLLVALKQ 254 (256)
T ss_pred HHHHHHHhc
Confidence 999998753
No 43
>PRK07581 hypothetical protein; Validated
Probab=96.45 E-value=0.0078 Score=56.95 Aligned_cols=60 Identities=10% Similarity=0.133 Sum_probs=49.9
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcC-CCCCCCCCChHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSR 335 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~-AGHmvP~dqP~~ 335 (359)
-.++|||..|+.|.++|....+.+.+.+ .+ ..+++|.+ +||+++.+||..
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~i----------------------------p~-a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALI----------------------------PN-AELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCccccccCcHH
Confidence 3689999999999999988877665532 11 45678888 999999999999
Q ss_pred HHHHHHHHhc
Q 018190 336 ALHLFSSFVH 345 (359)
Q Consensus 336 a~~mi~~fl~ 345 (359)
...++++||.
T Consensus 325 ~~~~~~~~~~ 334 (339)
T PRK07581 325 DIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 44
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=96.37 E-value=0.04 Score=56.77 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=56.8
Q ss_pred ccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhc
Q 018190 4 NKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNA 83 (359)
Q Consensus 4 ~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 83 (359)
.+-.+||+++----+||+..=.......--....+|+..++. |+...|..-...+.|+|.|||| +++..++.+..
T Consensus 421 ~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~~~ 495 (620)
T COG1506 421 SAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATKTP 495 (620)
T ss_pred cCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhcCc
Confidence 455678888855555554321110000011235789999999 9999998888899999999999 77777776542
Q ss_pred CCCCceeeeeEeEecCCcCC
Q 018190 84 HSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 84 ~~~~~~inLkGi~IGng~~~ 103 (359)
.++..+...|.++
T Consensus 496 -------~f~a~~~~~~~~~ 508 (620)
T COG1506 496 -------RFKAAVAVAGGVD 508 (620)
T ss_pred -------hhheEEeccCcch
Confidence 3555555555443
No 45
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.36 E-value=0.015 Score=45.11 Aligned_cols=67 Identities=28% Similarity=0.419 Sum_probs=53.6
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
..+||+.+|..|.++|+.+.+...+.| ++ =..+++.++||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l----------------------------~~-s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL----------------------------PG-SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC----------------------------CC-ceEEEEeccCcceecCCChHHH
Confidence 489999999999999999999988754 12 3468999999999865556778
Q ss_pred HHHHHHhcCCCCCC-CC
Q 018190 338 HLFSSFVHGRRLPN-NT 353 (359)
Q Consensus 338 ~mi~~fl~~~~~~~-~~ 353 (359)
+++++||....+|. +|
T Consensus 85 ~~v~~yl~~G~lP~~~~ 101 (103)
T PF08386_consen 85 KAVDDYLLDGTLPADGT 101 (103)
T ss_pred HHHHHHHHcCCCCCCcC
Confidence 89999998766663 44
No 46
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.34 E-value=0.013 Score=51.23 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=54.9
Q ss_pred ceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCC
Q 018190 8 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 87 (359)
Q Consensus 8 nvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 87 (359)
.|+-+|+| |.|+|... .-....+-...++.+.+..+.+..+. .++++.|.|+|| .++...+....
T Consensus 2 ~vi~~d~r-G~g~S~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~vG~S~Gg----~~~~~~a~~~p---- 66 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPH---WDPDFPDYTTDDLAADLEALREALGI---KKINLVGHSMGG----MLALEYAAQYP---- 66 (230)
T ss_dssp EEEEEECT-TSTTSSSC---CGSGSCTHCHHHHHHHHHHHHHHHTT---SSEEEEEETHHH----HHHHHHHHHSG----
T ss_pred EEEEEeCC-CCCCCCCC---ccCCcccccHHHHHHHHHHHHHHhCC---CCeEEEEECCCh----HHHHHHHHHCc----
Confidence 57889998 99999731 00123445577777778888877643 349999999999 66666655543
Q ss_pred ceeeeeEeEecCCcC
Q 018190 88 FKFNIKGVAIGNPLL 102 (359)
Q Consensus 88 ~~inLkGi~IGng~~ 102 (359)
-.++++++.++..
T Consensus 67 --~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 67 --ERVKKLVLISPPP 79 (230)
T ss_dssp --GGEEEEEEESESS
T ss_pred --hhhcCcEEEeeec
Confidence 2789998888764
No 47
>PLN02965 Probable pheophorbidase
Probab=96.07 E-value=0.013 Score=52.97 Aligned_cols=60 Identities=8% Similarity=0.176 Sum_probs=48.8
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
..+++|+..|..|.++|....+.+.+.+ .+ -.++.+.+|||++..++|+..
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~----------------------------~~-a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENW----------------------------PP-AQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhC----------------------------Cc-ceEEEecCCCCchhhcCHHHH
Confidence 4799999999999999987665554422 12 456778899999999999999
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
..+|.+|+.
T Consensus 243 ~~~l~~~~~ 251 (255)
T PLN02965 243 FQYLLQAVS 251 (255)
T ss_pred HHHHHHHHH
Confidence 999999974
No 48
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.04 E-value=0.024 Score=53.99 Aligned_cols=63 Identities=22% Similarity=0.299 Sum_probs=50.2
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEc-CCCCCCCCCChHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSRA 336 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~-~AGHmvP~dqP~~a 336 (359)
.++||+..|..|.++|....+...+.+... .. . .+|+.|. ++||+++.++|+..
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-------~~-----------------~-v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPAA-------GL-----------------R-VTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhhc-------CC-----------------c-eEEEEeCCCCCcchhhcCHHHH
Confidence 689999999999999999888777655210 00 0 4566665 89999999999999
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
.+.|.+||+
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999984
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.00 E-value=0.0087 Score=56.83 Aligned_cols=61 Identities=18% Similarity=0.226 Sum_probs=49.8
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEc-CCCCCCCCCChHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSRA 336 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~-~AGHmvP~dqP~~a 336 (359)
.++|||..|+.|.++|....+.+.+.+. .+ -.+++|. +|||+++.++|++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~---------------------------p~-a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG---------------------------PR-GSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC---------------------------CC-CeEEEEeCCccHHHHhcCHHHH
Confidence 6799999999999999887777665330 11 4567777 49999999999999
Q ss_pred HHHHHHHhcC
Q 018190 337 LHLFSSFVHG 346 (359)
Q Consensus 337 ~~mi~~fl~~ 346 (359)
..+|..||..
T Consensus 329 ~~~l~~FL~~ 338 (343)
T PRK08775 329 DAILTTALRS 338 (343)
T ss_pred HHHHHHHHHh
Confidence 9999999964
No 50
>PLN02965 Probable pheophorbidase
Probab=95.83 E-value=0.037 Score=49.98 Aligned_cols=77 Identities=16% Similarity=0.209 Sum_probs=48.1
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
..||-+|.| |.|.|-..... ..+-+..|+|+..+| +..+ ..++++|.|+|+|| .+|..+..+..
T Consensus 31 ~~via~Dl~-G~G~S~~~~~~--~~~~~~~a~dl~~~l----~~l~--~~~~~~lvGhSmGG----~ia~~~a~~~p--- 94 (255)
T PLN02965 31 FKSTCVDLT-GAGISLTDSNT--VSSSDQYNRPLFALL----SDLP--PDHKVILVGHSIGG----GSVTEALCKFT--- 94 (255)
T ss_pred ceEEEecCC-cCCCCCCCccc--cCCHHHHHHHHHHHH----HhcC--CCCCEEEEecCcch----HHHHHHHHhCc---
Confidence 579999999 99999532221 123344555555555 3332 12589999999999 45555544331
Q ss_pred CceeeeeEeEecCCcC
Q 018190 87 GFKFNIKGVAIGNPLL 102 (359)
Q Consensus 87 ~~~inLkGi~IGng~~ 102 (359)
-.++++++.|+..
T Consensus 95 ---~~v~~lvl~~~~~ 107 (255)
T PLN02965 95 ---DKISMAIYVAAAM 107 (255)
T ss_pred ---hheeEEEEEcccc
Confidence 2467888877653
No 51
>PRK10349 carboxylesterase BioH; Provisional
Probab=95.74 E-value=0.019 Score=51.75 Aligned_cols=70 Identities=17% Similarity=0.123 Sum_probs=45.6
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+...++.+|.| |.|.|...+ . .+-++.++++.+ +...+++|.|+|.|| .+|..+..+.
T Consensus 38 ~~~~vi~~Dl~-G~G~S~~~~--~--~~~~~~~~~l~~-----------~~~~~~~lvGhS~Gg----~ia~~~a~~~-- 95 (256)
T PRK10349 38 SHFTLHLVDLP-GFGRSRGFG--A--LSLADMAEAVLQ-----------QAPDKAIWLGWSLGG----LVASQIALTH-- 95 (256)
T ss_pred cCCEEEEecCC-CCCCCCCCC--C--CCHHHHHHHHHh-----------cCCCCeEEEEECHHH----HHHHHHHHhC--
Confidence 45789999999 999985321 1 233344444332 123579999999999 5555554433
Q ss_pred CCCceeeeeEeEecCC
Q 018190 85 SKGFKFNIKGVAIGNP 100 (359)
Q Consensus 85 ~~~~~inLkGi~IGng 100 (359)
+-.++++++.|+
T Consensus 96 ----p~~v~~lili~~ 107 (256)
T PRK10349 96 ----PERVQALVTVAS 107 (256)
T ss_pred ----hHhhheEEEecC
Confidence 235788888776
No 52
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=95.74 E-value=0.031 Score=49.63 Aligned_cols=75 Identities=19% Similarity=0.224 Sum_probs=47.8
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
..+++-+|.| |.|.|..... .+-++.|+++.++| +.. .-.++++.|+|+|| .+|..+..+...
T Consensus 27 ~~~vi~~D~~-G~G~S~~~~~----~~~~~~~~~l~~~l----~~~---~~~~~~lvG~S~Gg----~va~~~a~~~~~- 89 (242)
T PRK11126 27 DYPRLYIDLP-GHGGSAAISV----DGFADVSRLLSQTL----QSY---NILPYWLVGYSLGG----RIAMYYACQGLA- 89 (242)
T ss_pred CCCEEEecCC-CCCCCCCccc----cCHHHHHHHHHHHH----HHc---CCCCeEEEEECHHH----HHHHHHHHhCCc-
Confidence 3789999999 9999853211 13334455555444 332 34689999999999 566555544321
Q ss_pred CCceeeeeEeEecCCc
Q 018190 86 KGFKFNIKGVAIGNPL 101 (359)
Q Consensus 86 ~~~~inLkGi~IGng~ 101 (359)
-.++++++.++.
T Consensus 90 ----~~v~~lvl~~~~ 101 (242)
T PRK11126 90 ----GGLCGLIVEGGN 101 (242)
T ss_pred ----ccccEEEEeCCC
Confidence 127788887654
No 53
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=95.70 E-value=0.024 Score=52.78 Aligned_cols=80 Identities=15% Similarity=0.195 Sum_probs=49.2
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+..+|+-+|.| |.|.|..... ....+.++.++|+ ..+.+.. ...++++.|+|+|| .++..+..+..
T Consensus 52 ~~~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl----~~l~~~l---~~~~~~lvG~S~GG----~ia~~~a~~~p- 117 (306)
T TIGR01249 52 ETYRIVLFDQR-GCGKSTPHAC-LEENTTWDLVADI----EKLREKL---GIKNWLVFGGSWGS----TLALAYAQTHP- 117 (306)
T ss_pred cCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHH----HHHHHHc---CCCCEEEEEECHHH----HHHHHHHHHCh-
Confidence 35689999999 9999964321 1112223344444 4444433 23579999999999 55555544331
Q ss_pred CCCceeeeeEeEecCCcCC
Q 018190 85 SKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~~~ 103 (359)
-.++++++-+..+.
T Consensus 118 -----~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 118 -----EVVTGLVLRGIFLL 131 (306)
T ss_pred -----HhhhhheeeccccC
Confidence 24688888877664
No 54
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=95.65 E-value=0.035 Score=55.09 Aligned_cols=67 Identities=12% Similarity=0.178 Sum_probs=52.6
Q ss_pred HHHHHh-CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCC
Q 018190 251 LKRIIQ-NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 329 (359)
Q Consensus 251 l~~LL~-~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP 329 (359)
++.++. -.++|||..|+.|.++|....+.+.+.+ .+ -.+..+.+|||+.+
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i----------------------------P~-a~l~vI~~aGH~~~ 460 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV----------------------------PR-ARVKVIDDKDHITI 460 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC----------------------------CC-CEEEEeCCCCCcch
Confidence 445553 3799999999999999998877655422 11 45678899999999
Q ss_pred C-CChHHHHHHHHHHhcC
Q 018190 330 Y-AQPSRALHLFSSFVHG 346 (359)
Q Consensus 330 ~-dqP~~a~~mi~~fl~~ 346 (359)
. ++|+...+.|..|...
T Consensus 461 v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 461 VVGRQKEFARELEEIWRR 478 (481)
T ss_pred hhcCHHHHHHHHHHHhhc
Confidence 6 9999999999999853
No 55
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=95.52 E-value=0.029 Score=54.12 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=52.1
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEc-CCCCCCCCCChHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSRA 336 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~-~AGHmvP~dqP~~a 336 (359)
.++|||..|+.|.++|....+...+.+... . .. .+++.|. ++||+.+.++|+..
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a---~---------------------~~-~~l~~i~~~~GH~~~le~p~~~ 363 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAA---G---------------------AD-VSYAEIDSPYGHDAFLLDDPRY 363 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhc---C---------------------CC-eEEEEeCCCCCchhHhcCHHHH
Confidence 689999999999999998887766655210 0 01 4677775 99999999999999
Q ss_pred HHHHHHHhcCC
Q 018190 337 LHLFSSFVHGR 347 (359)
Q Consensus 337 ~~mi~~fl~~~ 347 (359)
.+.|.+||...
T Consensus 364 ~~~L~~FL~~~ 374 (379)
T PRK00175 364 GRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHhh
Confidence 99999999753
No 56
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=95.29 E-value=0.083 Score=48.44 Aligned_cols=59 Identities=14% Similarity=0.128 Sum_probs=46.5
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.+++|+..|..|.++|..-.+.+++.+. + -..+++ .+||+.+..+|+..-
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~---------------------------~--~~~~~l-~~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP---------------------------P--SQVYEL-ESDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC---------------------------c--cEEEEE-CCCCCccccCHHHHH
Confidence 6899999999999999987776665320 0 234566 499999999999999
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
.+|.++...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999987643
No 57
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.23 E-value=0.072 Score=51.58 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=52.0
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcC-CCCCCCCCChHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSR 335 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~-AGHmvP~dqP~~ 335 (359)
-..+|||..|+.|.++|....+...+.+... + .+ .++..|.+ +||+.+.++|+.
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~-~-----------------------~~-a~l~~I~s~~GH~~~le~p~~ 376 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQKQ-G-----------------------KY-AEVYEIESINGHMAGVFDIHL 376 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc-C-----------------------CC-eEEEEECCCCCcchhhcCHHH
Confidence 3789999999999999988777665544100 0 12 67888885 999999999999
Q ss_pred HHHHHHHHhcC
Q 018190 336 ALHLFSSFVHG 346 (359)
Q Consensus 336 a~~mi~~fl~~ 346 (359)
....|.+|+..
T Consensus 377 ~~~~I~~FL~~ 387 (389)
T PRK06765 377 FEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHcc
Confidence 99999999965
No 58
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=95.18 E-value=0.068 Score=52.23 Aligned_cols=79 Identities=19% Similarity=0.252 Sum_probs=53.1
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
.+||-+|.| |.|.|.... ...+ ...+...+..++...|.....++.|+|.|+||.+++.+|.. .
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~----~---- 286 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYL----E---- 286 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---cccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHh----C----
Confidence 689999999 999985321 1111 22223445566667777777889999999999776666532 1
Q ss_pred CceeeeeEeEecCCcCC
Q 018190 87 GFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~ 103 (359)
+-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 125788888877754
No 59
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.86 E-value=0.017 Score=55.58 Aligned_cols=79 Identities=22% Similarity=0.263 Sum_probs=50.9
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
-+||=||-| |||+|.... +..+ ...++..+-.|+...|+.-...+.++|-|+||.|++.+|. ++.
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~~D----~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~--le~----- 283 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LTQD----SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAA--LED----- 283 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S-S-----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHH--HTT-----
T ss_pred CEEEEEccC-CCcccccCC---CCcC----HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHH--hcc-----
Confidence 478999999 999985321 1112 2446667778888899998889999999999988887773 111
Q ss_pred CceeeeeEeEecCCcCC
Q 018190 87 GFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~ 103 (359)
-.|||++.-.|.++
T Consensus 284 ---~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 284 ---PRLKAVVALGAPVH 297 (411)
T ss_dssp ---TT-SEEEEES---S
T ss_pred ---cceeeEeeeCchHh
Confidence 25788666656554
No 60
>PRK06489 hypothetical protein; Provisional
Probab=94.68 E-value=0.099 Score=49.97 Aligned_cols=59 Identities=12% Similarity=0.169 Sum_probs=45.6
Q ss_pred CccEEEEecCCCcccCchhH--HHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCC----CCCCCCC
Q 018190 258 GIPVWVFSGDQDSVVPLLGS--RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGA----AHMVPYA 331 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~--~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~A----GHmvP~d 331 (359)
.++|||..|+.|.++|.... +.+.+.+ .+ -.+++|.+| ||++. +
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i----------------------------p~-a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV----------------------------KH-GRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC----------------------------cC-CeEEEECCCCCCCCcccc-c
Confidence 68999999999999987654 3332211 12 567888886 99986 8
Q ss_pred ChHHHHHHHHHHhcC
Q 018190 332 QPSRALHLFSSFVHG 346 (359)
Q Consensus 332 qP~~a~~mi~~fl~~ 346 (359)
+|+...+.|.+|+..
T Consensus 342 ~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 342 SAKFWKAYLAEFLAQ 356 (360)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999964
No 61
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=94.45 E-value=0.16 Score=46.53 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=52.4
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
.+++-+|.| |.|.|-.... . .+.+...+|+..++ .|++... ..+++|.|+|.||..+-.+| .+.
T Consensus 57 y~Vl~~Dl~-G~G~S~g~~~-~--~~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A----~~~---- 120 (266)
T TIGR03101 57 FGVLQIDLY-GCGDSAGDFA-A--ARWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAA----NPL---- 120 (266)
T ss_pred CEEEEECCC-CCCCCCCccc-c--CCHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHH----HhC----
Confidence 589999999 9998864322 1 13334456655443 3444331 36899999999995544443 222
Q ss_pred CceeeeeEeEecCCcCCCCCC
Q 018190 87 GFKFNIKGVAIGNPLLRLDQD 107 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~p~~~ 107 (359)
.-.++++++-+|.++....
T Consensus 121 --p~~v~~lVL~~P~~~g~~~ 139 (266)
T TIGR03101 121 --AAKCNRLVLWQPVVSGKQQ 139 (266)
T ss_pred --ccccceEEEeccccchHHH
Confidence 1257889998888875443
No 62
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=94.43 E-value=0.058 Score=47.16 Aligned_cols=71 Identities=17% Similarity=0.114 Sum_probs=42.5
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+..+|+.+|.| |.|.|.... . .+-++.++++.. + . ..+++|.|+|+||..+..+| .+..
T Consensus 29 ~~~~vi~~d~~-G~G~s~~~~--~--~~~~~~~~~~~~----~---~----~~~~~lvG~S~Gg~~a~~~a----~~~p- 87 (245)
T TIGR01738 29 AHFTLHLVDLP-GHGRSRGFG--P--LSLADAAEAIAA----Q---A----PDPAIWLGWSLGGLVALHIA----ATHP- 87 (245)
T ss_pred cCeEEEEecCC-cCccCCCCC--C--cCHHHHHHHHHH----h---C----CCCeEEEEEcHHHHHHHHHH----HHCH-
Confidence 34789999999 888875321 1 222333333322 1 1 25899999999995444444 3221
Q ss_pred CCCceeeeeEeEecCCc
Q 018190 85 SKGFKFNIKGVAIGNPL 101 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~ 101 (359)
-.++++++.++.
T Consensus 88 -----~~v~~~il~~~~ 99 (245)
T TIGR01738 88 -----DRVRALVTVASS 99 (245)
T ss_pred -----HhhheeeEecCC
Confidence 246788777654
No 63
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=94.41 E-value=0.11 Score=46.11 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=27.6
Q ss_pred eEEEEEcCCCCCCCCCChHHHHHHHHHHhc
Q 018190 316 LTFVTVRGAAHMVPYAQPSRALHLFSSFVH 345 (359)
Q Consensus 316 Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~ 345 (359)
..++.|.++||+++.++|+...+.|..|+.
T Consensus 211 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 211 LPLHVIPNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred CeEEEeCCCCCchhhhChHHHHHHHHHHHh
Confidence 567889999999999999999999999985
No 64
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=93.26 E-value=0.36 Score=44.95 Aligned_cols=84 Identities=23% Similarity=0.252 Sum_probs=57.4
Q ss_pred cceEEEeCCCCccccc-ccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 7 SNLLFVESPAGVGWSY-SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 7 anvlfiDqPvG~GFSy-~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
..|+=+|+| |.|-|. +... ...+-++.-.|+-.|++..-.. ....|+||+|+|-|| .||..-+.+..
T Consensus 62 ~~V~~~D~R-GhG~S~r~~rg--~~~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg----~Ia~~~~~~~~-- 129 (298)
T COG2267 62 FDVYALDLR-GHGRSPRGQRG--HVDSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGG----LIALLYLARYP-- 129 (298)
T ss_pred CEEEEecCC-CCCCCCCCCcC--CchhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHH----HHHHHHHHhCC--
Confidence 457778999 999997 3222 2222334445555555554443 345799999999999 77776665543
Q ss_pred CCceeeeeEeEecCCcCCCCC
Q 018190 86 KGFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~~p~~ 106 (359)
-.++|+++-+|++.+..
T Consensus 130 ----~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 130 ----PRIDGLVLSSPALGLGG 146 (298)
T ss_pred ----ccccEEEEECccccCCh
Confidence 47899999999998764
No 65
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=92.96 E-value=0.25 Score=50.21 Aligned_cols=82 Identities=17% Similarity=0.183 Sum_probs=55.5
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
-..++-+|.+ |.|.|-+.... .+ ...++|+..+++ |+.+-| +.+.++.++|.|||| .++..+....
T Consensus 53 Gy~vv~~D~R-G~g~S~g~~~~---~~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG----~~a~~~a~~~--- 118 (550)
T TIGR00976 53 GYAVVIQDTR-GRGASEGEFDL---LG-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLA----VTQLLAAVLQ--- 118 (550)
T ss_pred CcEEEEEecc-ccccCCCceEe---cC-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHH----HHHHHHhccC---
Confidence 4678999987 99999754321 12 346777777665 665555 344689999999999 4444443322
Q ss_pred CCceeeeeEeEecCCcCCC
Q 018190 86 KGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~~p 104 (359)
.-.|++|+..+++.|.
T Consensus 119 ---~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 119 ---PPALRAIAPQEGVWDL 134 (550)
T ss_pred ---CCceeEEeecCcccch
Confidence 1368999998888763
No 66
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=92.67 E-value=0.29 Score=46.36 Aligned_cols=77 Identities=14% Similarity=0.131 Sum_probs=48.8
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+...||.+|.| |-|=|. . .. .+.+..|+|+..+|+.. ++ ++.+.|.|.|+|| ++|.++..+.
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~-~~--~~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG----~vA~~~A~~~-- 159 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--D-VP--IDTADQADAIALLLDAL-----GI-ARLHAFVGYSYGA----LVGLQFASRH-- 159 (343)
T ss_pred cccEEEEEeCC-CCCCCC--C-CC--CCHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHH----HHHHHHHHHC--
Confidence 45789999999 655442 1 12 23344566666655442 22 2346899999999 6666666543
Q ss_pred CCCceeeeeEeEecCCcCC
Q 018190 85 SKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~~~ 103 (359)
+-.++++++.++...
T Consensus 160 ----P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 160 ----PARVRTLVVVSGAHR 174 (343)
T ss_pred ----hHhhheEEEECcccc
Confidence 125789998887643
No 67
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.18 E-value=0.57 Score=40.56 Aligned_cols=63 Identities=25% Similarity=0.471 Sum_probs=43.6
Q ss_pred HHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCCh
Q 018190 254 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 333 (359)
Q Consensus 254 LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP 333 (359)
+.....++|+..|+.|.+.+......+...+ + + . ..++++.++||+...++|
T Consensus 217 ~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~----------~-----------~------~-~~~~~~~~~gH~~~~~~p 268 (282)
T COG0596 217 LARITVPTLIIHGEDDPVVPAELARRLAAAL----------P-----------N------D-ARLVVIPGAGHFPHLEAP 268 (282)
T ss_pred hccCCCCeEEEecCCCCcCCHHHHHHHHhhC----------C-----------C------C-ceEEEeCCCCCcchhhcH
Confidence 3345799999999999555554423332211 0 0 2 677889999999999999
Q ss_pred HHHHHHHHHHh
Q 018190 334 SRALHLFSSFV 344 (359)
Q Consensus 334 ~~a~~mi~~fl 344 (359)
+...+.+..|+
T Consensus 269 ~~~~~~i~~~~ 279 (282)
T COG0596 269 EAFAAALLAFL 279 (282)
T ss_pred HHHHHHHHHHH
Confidence 97777766644
No 68
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=92.14 E-value=0.19 Score=46.28 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=49.9
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
..|||.||-+.+..-.|... ..+...+++++..+|+...+.. .+...+++|.|.|.||+-+-.+|..+-
T Consensus 66 ~~nVi~vD~~~~~~~~y~~a----~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~------ 134 (275)
T cd00707 66 DYNVIVVDWGRGANPNYPQA----VNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLN------ 134 (275)
T ss_pred CCEEEEEECccccccChHHH----HHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhc------
Confidence 47999999885421112110 1233455677777777766543 234568999999999976666655331
Q ss_pred CCceeeeeEeEecCCc
Q 018190 86 KGFKFNIKGVAIGNPL 101 (359)
Q Consensus 86 ~~~~inLkGi~IGng~ 101 (359)
-+++.|..-+|.
T Consensus 135 ----~~v~~iv~LDPa 146 (275)
T cd00707 135 ----GKLGRITGLDPA 146 (275)
T ss_pred ----CccceeEEecCC
Confidence 146777776654
No 69
>PRK06489 hypothetical protein; Provisional
Probab=92.05 E-value=0.46 Score=45.39 Aligned_cols=80 Identities=11% Similarity=0.079 Sum_probs=45.6
Q ss_pred cccceEEEeCCCCcccccccCCCC---C-CCCchHhHHHHHHHHHHHHHHCCCCCCCce-EEEcccccceehHHHHHHHH
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSD---Y-NCGDASTARDMHVFMMNWYEKFPEFKSREL-FLTGESYAGHYIPQLADVLL 79 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~---~-~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~-yi~GESYgG~yvP~la~~i~ 79 (359)
+...||.+|.| |.|.|....... . ..+-++.++++..+|. +.. +. .++ +|.|.|.|| .+|..+.
T Consensus 104 ~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~---~~l-gi--~~~~~lvG~SmGG----~vAl~~A 172 (360)
T PRK06489 104 SKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT---EGL-GV--KHLRLILGTSMGG----MHAWMWG 172 (360)
T ss_pred cCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH---Hhc-CC--CceeEEEEECHHH----HHHHHHH
Confidence 44799999999 999985322110 0 1122333444433322 221 22 355 489999999 6666665
Q ss_pred hhhcCCCCceeeeeEeEecCCc
Q 018190 80 DHNAHSKGFKFNIKGVAIGNPL 101 (359)
Q Consensus 80 ~~n~~~~~~~inLkGi~IGng~ 101 (359)
.+.. =.++++++.++.
T Consensus 173 ~~~P------~~V~~LVLi~s~ 188 (360)
T PRK06489 173 EKYP------DFMDALMPMASQ 188 (360)
T ss_pred HhCc------hhhheeeeeccC
Confidence 5432 247787776654
No 70
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=91.85 E-value=0.29 Score=42.48 Aligned_cols=56 Identities=21% Similarity=0.377 Sum_probs=46.1
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
-.+++|+.+|..|.++|........+.+ .+ -.++.+.++||....+.|+..
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~----------------------------~~-~~~~~~~~~GH~~~~~~~~~~ 224 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLI----------------------------PN-SQLVLIEGSGHFAFLEGPDEF 224 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHS----------------------------TT-EEEEEETTCCSTHHHHSHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhc----------------------------CC-CEEEECCCCChHHHhcCHHhh
Confidence 4789999999999999998887744421 22 567889999999999999999
Q ss_pred HHHHH
Q 018190 337 LHLFS 341 (359)
Q Consensus 337 ~~mi~ 341 (359)
-++|.
T Consensus 225 ~~~i~ 229 (230)
T PF00561_consen 225 NEIII 229 (230)
T ss_dssp HHHHH
T ss_pred hhhhc
Confidence 88875
No 71
>PRK10566 esterase; Provisional
Probab=91.32 E-value=0.51 Score=42.11 Aligned_cols=62 Identities=29% Similarity=0.404 Sum_probs=45.2
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
..+||+.+|..|.++|...++.+.+.+... +.. .+ +++.++.++||.+. |. ++
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~~---------------------~~-~~~~~~~~~~H~~~---~~-~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER-GLD---------------------KN-LTCLWEPGVRHRIT---PE-AL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-CCC---------------------cc-eEEEecCCCCCccC---HH-HH
Confidence 468999999999999999988887766311 100 12 88899999999975 43 45
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
+-+.+||..
T Consensus 239 ~~~~~fl~~ 247 (249)
T PRK10566 239 DAGVAFFRQ 247 (249)
T ss_pred HHHHHHHHh
Confidence 555567753
No 72
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=91.19 E-value=0.62 Score=46.39 Aligned_cols=78 Identities=18% Similarity=0.152 Sum_probs=46.8
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+...++-+|.| |.|-|-...... .+-++.++++. +.+.+.. ...+++|.|+|.|| .+|..+..+..
T Consensus 231 ~~yrVia~Dl~-G~G~S~~p~~~~--ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG----~iAl~~A~~~P- 296 (481)
T PLN03087 231 STYRLFAVDLL-GFGRSPKPADSL--YTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGC----ILALALAVKHP- 296 (481)
T ss_pred CCCEEEEECCC-CCCCCcCCCCCc--CCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHH----HHHHHHHHhCh-
Confidence 35689999999 888884321111 22233333332 2444443 34589999999999 55555544331
Q ss_pred CCCceeeeeEeEecCCc
Q 018190 85 SKGFKFNIKGVAIGNPL 101 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~ 101 (359)
-.++++++.++-
T Consensus 297 -----e~V~~LVLi~~~ 308 (481)
T PLN03087 297 -----GAVKSLTLLAPP 308 (481)
T ss_pred -----HhccEEEEECCC
Confidence 247788888753
No 73
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=90.55 E-value=0.99 Score=41.86 Aligned_cols=70 Identities=20% Similarity=0.395 Sum_probs=51.7
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCC--CCChHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP--YAQPSR 335 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP--~dqP~~ 335 (359)
+.+|+||+|..|-++|+..+...++++-. ..+...+|.++.+++|+.. ...|.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~------------------------~G~a~V~~~~~~~~~H~~~~~~~~~~a 274 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCA------------------------AGGADVEYVRYPGGGHLGAAFASAPDA 274 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHH------------------------cCCCCEEEEecCCCChhhhhhcCcHHH
Confidence 58999999999999999999999986521 1111288999999999964 467655
Q ss_pred HHHHHHHHhcCCCCCCC
Q 018190 336 ALHLFSSFVHGRRLPNN 352 (359)
Q Consensus 336 a~~mi~~fl~~~~~~~~ 352 (359)
. .-|+.=+.|++.+++
T Consensus 275 ~-~Wl~~rf~G~~~~~~ 290 (290)
T PF03583_consen 275 L-AWLDDRFAGKPATSG 290 (290)
T ss_pred H-HHHHHHHCCCCCCCC
Confidence 5 444444678877653
No 74
>PLN02454 triacylglycerol lipase
Probab=90.38 E-value=0.85 Score=44.12 Aligned_cols=68 Identities=16% Similarity=0.273 Sum_probs=48.7
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
..+.+++...++...+.+|..+ ..++|+|+|-||-.+-..|..|...... ...+++..+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 3567788899999999998764 3699999999996666555566543211 124567788999887753
No 75
>PRK11460 putative hydrolase; Provisional
Probab=90.37 E-value=0.84 Score=40.75 Aligned_cols=63 Identities=17% Similarity=0.202 Sum_probs=47.3
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
...+||+.+|..|.++|..-++...+.|+.. + .+ .++.++.++||.+..+.-+.+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~-g-----------------------~~-~~~~~~~~~gH~i~~~~~~~~ 201 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISL-G-----------------------GD-VTLDIVEDLGHAIDPRLMQFA 201 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHC-C-----------------------CC-eEEEEECCCCCCCCHHHHHHH
Confidence 4689999999999999999998888877311 1 12 677888999999986555555
Q ss_pred HHHHHHHh
Q 018190 337 LHLFSSFV 344 (359)
Q Consensus 337 ~~mi~~fl 344 (359)
.+-|.+++
T Consensus 202 ~~~l~~~l 209 (232)
T PRK11460 202 LDRLRYTV 209 (232)
T ss_pred HHHHHHHc
Confidence 55555555
No 76
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=90.33 E-value=0.9 Score=42.63 Aligned_cols=66 Identities=21% Similarity=0.321 Sum_probs=43.6
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhh
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n 82 (359)
..+|||..--| |||+|.+..+ -++..++. .++-+++.. .-.-+.+.+.+.|.|-|| .++..-++++
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s------~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG----~Vqa~AL~~~ 236 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS------RKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGG----GVQAEALKKE 236 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC------HHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccH----HHHHHHHHhc
Confidence 35899999999 9999976432 23333333 334444443 334566889999999999 6766655544
No 77
>PRK05855 short chain dehydrogenase; Validated
Probab=90.00 E-value=0.7 Score=46.79 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=39.3
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccc
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 68 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG 68 (359)
+...|+-+|.| |.|.|....... ..+.+..++|+..+++..- ...+++|.|+|+||
T Consensus 50 ~~~~Vi~~D~~-G~G~S~~~~~~~-~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg 105 (582)
T PRK05855 50 DRFRVVAYDVR-GAGRSSAPKRTA-AYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGS 105 (582)
T ss_pred cceEEEEecCC-CCCCCCCCCccc-ccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHH
Confidence 45689999999 999997433211 2345567778777776531 13579999999999
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=89.72 E-value=2.1 Score=39.13 Aligned_cols=52 Identities=23% Similarity=0.221 Sum_probs=34.8
Q ss_pred HHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 42 VFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 42 ~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
+.|..+.+. ++ ....+++|+|.|.|| ++|..+..+.. -.+++++..+|+.++
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG----~~a~~~a~~~p------~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGG----HGALVIALKNP------DRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhH----HHHHHHHHhCc------ccceEEEEECCccCc
Confidence 334444443 43 455689999999999 66666654432 246789888888775
No 79
>PRK05855 short chain dehydrogenase; Validated
Probab=89.55 E-value=0.38 Score=48.69 Aligned_cols=59 Identities=22% Similarity=0.217 Sum_probs=44.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.+++||.+|+.|.++|....+.+.+. ..+ ..+.++ .+||+++.+.|+...
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~----------------------------~~~-~~~~~~-~~gH~~~~e~p~~~~ 282 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRW----------------------------VPR-LWRREI-KAGHWLPMSHPQVLA 282 (582)
T ss_pred cCceEEEEeCCCcccCHHHhcccccc----------------------------CCc-ceEEEc-cCCCcchhhChhHHH
Confidence 58999999999999996544432210 012 444555 479999999999999
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
+.+.+|+..
T Consensus 283 ~~i~~fl~~ 291 (582)
T PRK05855 283 AAVAEFVDA 291 (582)
T ss_pred HHHHHHHHh
Confidence 999999965
No 80
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=89.31 E-value=0.35 Score=42.35 Aligned_cols=81 Identities=23% Similarity=0.319 Sum_probs=57.1
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
..||+-||-= |-|-|.+..+..=-..|.+++-| .+...|...++++.++|-|-||--+-.+|. +|
T Consensus 106 ~mnv~ivsYR-GYG~S~GspsE~GL~lDs~avld-------yl~t~~~~dktkivlfGrSlGGAvai~las----k~--- 170 (300)
T KOG4391|consen 106 KMNVLIVSYR-GYGKSEGSPSEEGLKLDSEAVLD-------YLMTRPDLDKTKIVLFGRSLGGAVAIHLAS----KN--- 170 (300)
T ss_pred CceEEEEEee-ccccCCCCccccceeccHHHHHH-------HHhcCccCCcceEEEEecccCCeeEEEeec----cc---
Confidence 4688888875 88888876543212344454444 345788999999999999999955555553 44
Q ss_pred CCceeeeeEeEecCCcCCC
Q 018190 86 KGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~~p 104 (359)
.-.+.++++-|-+++-
T Consensus 171 ---~~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 171 ---SDRISAIIVENTFLSI 186 (300)
T ss_pred ---hhheeeeeeechhccc
Confidence 2368899999988873
No 81
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=88.90 E-value=2 Score=42.23 Aligned_cols=79 Identities=16% Similarity=0.252 Sum_probs=49.4
Q ss_pred ccceEEEeCCCCcccc-cccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 6 ASNLLFVESPAGVGWS-YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 6 ~anvlfiDqPvG~GFS-y~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
..|||-||-|- -|-| |... ..+...+|+++.+||+...+.. .+.-.+++|.|.|.|||-+-.+|.+ .
T Consensus 73 d~nVI~VDw~g-~g~s~y~~a----~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~----~-- 140 (442)
T TIGR03230 73 SANVIVVDWLS-RAQQHYPTS----AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSL----T-- 140 (442)
T ss_pred CCEEEEEECCC-cCCCCCccc----cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHh----C--
Confidence 47999999983 3423 2211 1234567778777776555443 3555689999999999755554432 1
Q ss_pred CCCceeeeeEeEecCC
Q 018190 85 SKGFKFNIKGVAIGNP 100 (359)
Q Consensus 85 ~~~~~inLkGi~IGng 100 (359)
.-.|.+|.+-||
T Consensus 141 ----p~rV~rItgLDP 152 (442)
T TIGR03230 141 ----KHKVNRITGLDP 152 (442)
T ss_pred ----CcceeEEEEEcC
Confidence 124667777666
No 82
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=88.79 E-value=0.84 Score=43.89 Aligned_cols=60 Identities=18% Similarity=0.249 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHCCCCCC-CceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 36 TARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 36 ~a~d~~~fL~~F~~~fP~~~~-~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.|.|...+|..-.+.||.... .|....|-|||| |+..|+.+|. +=.+.||+=-++|.-|.
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 488999999999999999985 799999999999 4444444443 23466776666776654
No 83
>PRK10566 esterase; Provisional
Probab=88.65 E-value=2.1 Score=38.07 Aligned_cols=65 Identities=11% Similarity=0.124 Sum_probs=37.0
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCc-----hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHH
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGD-----ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 74 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~-----~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~l 74 (359)
.+++.+|.| |.|-|+...... .... ....+|+..++ .++...+.....+++|.|.|+||..+-.+
T Consensus 55 ~~v~~~d~~-g~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~ 124 (249)
T PRK10566 55 FRVIMPDAP-MHGARFSGDEAR-RLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGI 124 (249)
T ss_pred CEEEEecCC-cccccCCCcccc-chhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHH
Confidence 578999988 777664322111 0010 12344544444 44444444556789999999999444333
No 84
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.63 E-value=1.8 Score=43.15 Aligned_cols=87 Identities=18% Similarity=0.298 Sum_probs=63.8
Q ss_pred hHHHHHHHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCC
Q 018190 247 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAH 326 (359)
Q Consensus 247 ~~~~l~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGH 326 (359)
..+.|....++|=|+|+|+|..|.+++..+|..+-+++...++-.. ..-+.| +.|..|.|.||
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~-~~v~dF----------------~RlF~vPGm~H 404 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGAL-ADVDDF----------------YRLFMVPGMGH 404 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhccccc-ccccce----------------eEEEecCCCcc
Confidence 3345666677899999999999999999999999998854332110 011112 77899999999
Q ss_pred CC--CCCChHHHHHHHHHHhcCCCCC
Q 018190 327 MV--PYAQPSRALHLFSSFVHGRRLP 350 (359)
Q Consensus 327 mv--P~dqP~~a~~mi~~fl~~~~~~ 350 (359)
-- |-..|-.++.-|.+|+.+..-|
T Consensus 405 C~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 405 CGGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred cCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 85 4456667888888899766554
No 85
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=88.49 E-value=1.9 Score=45.59 Aligned_cols=93 Identities=17% Similarity=0.404 Sum_probs=56.6
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCC--------------CCCCCceEEEcccccceeh
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFP--------------EFKSRELFLTGESYAGHYI 71 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP--------------~~~~~~~yi~GESYgG~yv 71 (359)
-.+++++|.. |+|-|-+.-.. ...+..+|..+.+ +|+...+ ...+-.+-++|.||+|
T Consensus 279 GYaVV~~D~R-Gtg~SeG~~~~----~~~~E~~D~~~vI-eWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G--- 349 (767)
T PRK05371 279 GFAVVYVSGI-GTRGSDGCPTT----GDYQEIESMKAVI-DWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG--- 349 (767)
T ss_pred CeEEEEEcCC-CCCCCCCcCcc----CCHHHHHHHHHHH-HHHhhCCccccccccccccccCCCCCeeEEEEEcHHH---
Confidence 4689999976 99999775321 2223345544433 2554221 1234689999999999
Q ss_pred HHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCCCchhhHHHHHHcCCC
Q 018190 72 PQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMI 121 (359)
Q Consensus 72 P~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~~~~~~~~~~~~~gli 121 (359)
+++..+.... .-.||.|+-..|+.+ +++|.+..|++
T Consensus 350 -~~~~~aAa~~------pp~LkAIVp~a~is~-------~yd~yr~~G~~ 385 (767)
T PRK05371 350 -TLPNAVATTG------VEGLETIIPEAAISS-------WYDYYRENGLV 385 (767)
T ss_pred -HHHHHHHhhC------CCcceEEEeeCCCCc-------HHHHhhcCCce
Confidence 5554444332 236999998887766 33444555543
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=88.37 E-value=0.96 Score=39.75 Aligned_cols=77 Identities=17% Similarity=0.136 Sum_probs=47.1
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
.+|..|+.| |-+ .. . ....+-++.|+.+...+ ....|+ -|++|+|.|+||.-+=.+|+++.++.
T Consensus 28 ~~v~~i~~~-~~~--~~-~--~~~~si~~la~~y~~~I---~~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G---- 91 (229)
T PF00975_consen 28 IGVYGIEYP-GRG--DD-E--PPPDSIEELASRYAEAI---RARQPE---GPYVLAGWSFGGILAFEMARQLEEAG---- 91 (229)
T ss_dssp EEEEEECST-TSC--TT-S--HEESSHHHHHHHHHHHH---HHHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT----
T ss_pred EEEEEEecC-CCC--CC-C--CCCCCHHHHHHHHHHHh---hhhCCC---CCeeehccCccHHHHHHHHHHHHHhh----
Confidence 457778777 444 11 1 11235556666655544 334443 39999999999966666666665542
Q ss_pred CceeeeeEeEecCCcC
Q 018190 87 GFKFNIKGVAIGNPLL 102 (359)
Q Consensus 87 ~~~inLkGi~IGng~~ 102 (359)
....+|++.++..
T Consensus 92 ---~~v~~l~liD~~~ 104 (229)
T PF00975_consen 92 ---EEVSRLILIDSPP 104 (229)
T ss_dssp ----SESEEEEESCSS
T ss_pred ---hccCceEEecCCC
Confidence 4578888888654
No 87
>PRK13604 luxD acyl transferase; Provisional
Probab=88.36 E-value=1.6 Score=40.62 Aligned_cols=57 Identities=18% Similarity=0.254 Sum_probs=43.2
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
..+||+++|+.|-+||..+++.+.+++. .++ -.+..+.||+|... ..+....
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~--------------------------s~~-kkl~~i~Ga~H~l~-~~~~~~~ 253 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR--------------------------SEQ-CKLYSLIGSSHDLG-ENLVVLR 253 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc--------------------------cCC-cEEEEeCCCccccC-cchHHHH
Confidence 5899999999999999999999887541 012 56788999999986 4455555
Q ss_pred HHHHH
Q 018190 338 HLFSS 342 (359)
Q Consensus 338 ~mi~~ 342 (359)
.+.+.
T Consensus 254 ~~~~~ 258 (307)
T PRK13604 254 NFYQS 258 (307)
T ss_pred HHHHH
Confidence 55544
No 88
>PLN02442 S-formylglutathione hydrolase
Probab=88.15 E-value=1.9 Score=39.74 Aligned_cols=56 Identities=14% Similarity=0.199 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 37 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 37 a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.+++-..+..++.. +...+++|+|.|+|| ++|..+..+.. -.+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG----~~a~~~a~~~p------~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFDQ---LDTSRASIFGHSMGG----HGALTIYLKNP------DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHh---cCCCceEEEEEChhH----HHHHHHHHhCc------hhEEEEEEECCccCcc
Confidence 34444555555543 345679999999999 55555554432 2478899999988754
No 89
>PRK07581 hypothetical protein; Validated
Probab=88.02 E-value=1.3 Score=41.80 Aligned_cols=84 Identities=14% Similarity=0.050 Sum_probs=48.2
Q ss_pred cccceEEEeCCCCcccccccCCC--CCCCC---chHhHHHHHHHHHHHHHHCCCCCCCc-eEEEcccccceehHHHHHHH
Q 018190 5 KASNLLFVESPAGVGWSYSNTTS--DYNCG---DASTARDMHVFMMNWYEKFPEFKSRE-LFLTGESYAGHYIPQLADVL 78 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~--~~~~~---~~~~a~d~~~fL~~F~~~fP~~~~~~-~yi~GESYgG~yvP~la~~i 78 (359)
+...||-+|.| |.|.|-..... .+... ....++++......+.+. +.-.+ .+|.|.|+|| .+|..+
T Consensus 70 ~~~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG----~va~~~ 141 (339)
T PRK07581 70 EKYFIIIPNMF-GNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGA----QQTYHW 141 (339)
T ss_pred CceEEEEecCC-CCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHH----HHHHHH
Confidence 34689999999 99998533211 11111 112345544433323332 22346 5899999999 666666
Q ss_pred HhhhcCCCCceeeeeEeEecCCcC
Q 018190 79 LDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 79 ~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
..+.. -.++++++.++..
T Consensus 142 a~~~P------~~V~~Lvli~~~~ 159 (339)
T PRK07581 142 AVRYP------DMVERAAPIAGTA 159 (339)
T ss_pred HHHCH------HHHhhheeeecCC
Confidence 55442 2467777776554
No 90
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=87.89 E-value=0.91 Score=39.73 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhh
Q 018190 37 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (359)
Q Consensus 37 a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n 82 (359)
-.|+..++..|++.+++ +|||.|+|+|=|+ .+..+|+++.
T Consensus 77 y~DV~~AF~~yL~~~n~--GRPfILaGHSQGs----~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNN--GRPFILAGHSQGS----MHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCC--CCCEEEEEeChHH----HHHHHHHHHH
Confidence 45778899999998865 8999999999999 5566666543
No 91
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=87.88 E-value=1 Score=41.91 Aligned_cols=60 Identities=23% Similarity=0.293 Sum_probs=44.9
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
...+||+..|-.+--++..-....... |. + ..+..+.+|||+|..|+|+..
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~------fp----------------------~-~e~~~ld~aGHwVh~E~P~~~ 302 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI------FP----------------------N-VEVHELDEAGHWVHLEKPEEF 302 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh------cc----------------------c-hheeecccCCceeecCCHHHH
Confidence 467899999988888777654444331 11 1 345666779999999999999
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
...|..|+.
T Consensus 303 ~~~i~~Fl~ 311 (315)
T KOG2382|consen 303 IESISEFLE 311 (315)
T ss_pred HHHHHHHhc
Confidence 999999874
No 92
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=87.43 E-value=2.7 Score=38.44 Aligned_cols=78 Identities=19% Similarity=0.177 Sum_probs=52.9
Q ss_pred cccccccCC-----CCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeee
Q 018190 18 VGWSYSNTT-----SDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI 92 (359)
Q Consensus 18 ~GFSy~~~~-----~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inL 92 (359)
.|||..... +.-..+-++..+.-.+||+++....+ -.+.+++|.|+|=|+ +++.+|+++... ...++
T Consensus 41 ~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~~---~~~~V 112 (266)
T PF10230_consen 41 AGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLPD---LKFRV 112 (266)
T ss_pred CCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhccc---cCCce
Confidence 466654443 11234555566777889999987654 246789999999999 999999988752 13566
Q ss_pred eEeEecCCcCC
Q 018190 93 KGVAIGNPLLR 103 (359)
Q Consensus 93 kGi~IGng~~~ 103 (359)
++++.-=|-+.
T Consensus 113 ~~~~lLfPTi~ 123 (266)
T PF10230_consen 113 KKVILLFPTIE 123 (266)
T ss_pred eEEEEeCCccc
Confidence 66666555543
No 93
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=87.39 E-value=1.3 Score=35.75 Aligned_cols=61 Identities=25% Similarity=0.343 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 36 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 36 ~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
..+.+.+.|++..+..| +..+.|+|+|-||-.+-.+|..+.++.... ..+++-+..|.|-+
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~---~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSS---SSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTS---TTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccccc---ccceeeeecCCccc
Confidence 34456677777777777 478999999999988888888887655321 35788888887766
No 94
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=87.22 E-value=1.5 Score=40.07 Aligned_cols=78 Identities=13% Similarity=0.170 Sum_probs=46.8
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
..+++-+|.| |.|.|...... ..+-++.+++ |..+++.... ..+++|.|+||||. ++..+..+..
T Consensus 45 g~~vi~~dl~-g~G~s~~~~~~--~~~~~~~~~~----l~~~i~~l~~--~~~v~lvGhS~GG~----v~~~~a~~~p-- 109 (273)
T PLN02211 45 GYKVTCIDLK-SAGIDQSDADS--VTTFDEYNKP----LIDFLSSLPE--NEKVILVGHSAGGL----SVTQAIHRFP-- 109 (273)
T ss_pred CCEEEEeccc-CCCCCCCCccc--CCCHHHHHHH----HHHHHHhcCC--CCCEEEEEECchHH----HHHHHHHhCh--
Confidence 3689999999 88877432211 1233344444 4444444322 46899999999995 4444443321
Q ss_pred CCceeeeeEeEecCCcC
Q 018190 86 KGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 86 ~~~~inLkGi~IGng~~ 102 (359)
-.++++++.++.+
T Consensus 110 ----~~v~~lv~~~~~~ 122 (273)
T PLN02211 110 ----KKICLAVYVAATM 122 (273)
T ss_pred ----hheeEEEEecccc
Confidence 1467777776643
No 95
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=86.90 E-value=2.9 Score=39.61 Aligned_cols=61 Identities=23% Similarity=0.321 Sum_probs=42.4
Q ss_pred HHHHHHH-HHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCC
Q 018190 40 MHVFMMN-WYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 40 ~~~fL~~-F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~ 106 (359)
+..++++ |.+..-+++ .++|+|.|-||.-+-.+|.++.+.. ...+.|+|+++.-|++....
T Consensus 150 l~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 150 LKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEEecccCCCC
Confidence 3344444 666554443 3999999999977777777776543 12578999999998886543
No 96
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=85.81 E-value=1.6 Score=42.86 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=52.0
Q ss_pred CCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCCCchh
Q 018190 31 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPA 110 (359)
Q Consensus 31 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~~~~~ 110 (359)
-+.+|+-+|+..|++.+-.++....+.|+.++|-|||| +||..+-.+-.. -+.|..--++-+....++..
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r~kyP~------~~~ga~ASSapv~a~~df~~ 156 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFRLKYPH------LFDGAWASSAPVQAKVDFWE 156 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHHHH-TT------T-SEEEEET--CCHCCTTTH
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHHhhCCC------eeEEEEeccceeeeecccHH
Confidence 46788999999999999888876778899999999999 899888654421 25677777777777766655
Q ss_pred hHH
Q 018190 111 IYE 113 (359)
Q Consensus 111 ~~~ 113 (359)
|.+
T Consensus 157 y~~ 159 (434)
T PF05577_consen 157 YFE 159 (434)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 97
>PLN02872 triacylglycerol lipase
Probab=85.76 E-value=1.7 Score=42.27 Aligned_cols=61 Identities=13% Similarity=0.319 Sum_probs=47.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCC---CCCCChH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM---VPYAQPS 334 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHm---vP~dqP~ 334 (359)
.++|+|+.|..|.+++....+.+.+.+. .. -.+..+.++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp----~~------------------------~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP----SK------------------------PELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC----Cc------------------------cEEEEcCCCCCHHHHhCcchHH
Confidence 6899999999999999998888877541 00 123456899996 4558899
Q ss_pred HHHHHHHHHhcC
Q 018190 335 RALHLFSSFVHG 346 (359)
Q Consensus 335 ~a~~mi~~fl~~ 346 (359)
..++-+-.|+..
T Consensus 377 ~V~~~Il~fL~~ 388 (395)
T PLN02872 377 DVYNHMIQFFRS 388 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999888889864
No 98
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=85.66 E-value=1.3 Score=40.47 Aligned_cols=74 Identities=16% Similarity=0.299 Sum_probs=49.2
Q ss_pred EEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCce
Q 018190 10 LFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFK 89 (359)
Q Consensus 10 lfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~ 89 (359)
+=+|.= |.|=|-.++..+ .+-+..++|+...++.+|..-| .++.|.|+|-|| +||.+....+. -
T Consensus 106 ~a~DlR-gHGeTk~~~e~d--lS~eT~~KD~~~~i~~~fge~~----~~iilVGHSmGG----aIav~~a~~k~-----l 169 (343)
T KOG2564|consen 106 LALDLR-GHGETKVENEDD--LSLETMSKDFGAVIKELFGELP----PQIILVGHSMGG----AIAVHTAASKT-----L 169 (343)
T ss_pred EEeecc-ccCccccCChhh--cCHHHHHHHHHHHHHHHhccCC----CceEEEeccccc----hhhhhhhhhhh-----c
Confidence 345643 777666655554 3555668899888888884433 259999999999 66655544332 1
Q ss_pred eeeeEeEecC
Q 018190 90 FNIKGVAIGN 99 (359)
Q Consensus 90 inLkGi~IGn 99 (359)
-+|-|+.+.+
T Consensus 170 psl~Gl~viD 179 (343)
T KOG2564|consen 170 PSLAGLVVID 179 (343)
T ss_pred hhhhceEEEE
Confidence 3588888765
No 99
>COG0400 Predicted esterase [General function prediction only]
Probab=85.32 E-value=2.3 Score=37.30 Aligned_cols=60 Identities=23% Similarity=0.343 Sum_probs=43.1
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
++.+|++.+|..|.+||..-+++..+.|+. .+. + ..+.++. .||.++. +.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~-~g~-----------------------~-v~~~~~~-~GH~i~~----e~ 194 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTA-SGA-----------------------D-VEVRWHE-GGHEIPP----EE 194 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHH-cCC-----------------------C-EEEEEec-CCCcCCH----HH
Confidence 589999999999999999999998887742 111 1 4555555 9999974 34
Q ss_pred HHHHHHHhcC
Q 018190 337 LHLFSSFVHG 346 (359)
Q Consensus 337 ~~mi~~fl~~ 346 (359)
++.+++|+.+
T Consensus 195 ~~~~~~wl~~ 204 (207)
T COG0400 195 LEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHh
Confidence 4444456644
No 100
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=85.11 E-value=3.6 Score=38.09 Aligned_cols=52 Identities=21% Similarity=0.365 Sum_probs=37.2
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.+++||.+|+.|.+||...++.+.+.+ .+ -.++++.++||+.. .|+...
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~--~~~~~~ 296 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAF----------------------------PE-AELKVTNNAGHSAF--DPNNLA 296 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CEEEEECCCCCCCC--ChHHHH
Confidence 589999999999999998766655432 12 45677889999974 444444
Q ss_pred HHH
Q 018190 338 HLF 340 (359)
Q Consensus 338 ~mi 340 (359)
+++
T Consensus 297 ~i~ 299 (306)
T TIGR01249 297 ALV 299 (306)
T ss_pred HHH
Confidence 433
No 101
>PRK10162 acetyl esterase; Provisional
Probab=84.72 E-value=2.9 Score=39.23 Aligned_cols=61 Identities=16% Similarity=0.118 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 39 d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
+.+.++...-+.+ .....++.|+|+|.||+-+-.++..+.+... ....++|+++..|+++.
T Consensus 137 ~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 137 AVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 3344444444333 2345689999999999777666665544321 12457888888888764
No 102
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=84.45 E-value=1.5 Score=38.00 Aligned_cols=63 Identities=21% Similarity=0.254 Sum_probs=46.0
Q ss_pred HhHHHHHHHHHHHHHH---CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 35 STARDMHVFMMNWYEK---FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~---fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
...+|...+++...+. + ++...+++|+|+|=||+.+-.++..+.+... ..++|+++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 4456666666555543 2 3456789999999999888888877766431 248999999999887
No 103
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=84.41 E-value=2 Score=37.66 Aligned_cols=59 Identities=24% Similarity=0.428 Sum_probs=41.0
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
+.+|++.+|+.|.++|....+...+.|+.. + .+ .+|.+..|.||-++ ...+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~-~-----------------------~~-v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA-G-----------------------AN-VEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT-T------------------------G-EEEEEETT-SSS------HHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc-C-----------------------CC-EEEEEcCCCCCCCC----HHHH
Confidence 689999999999999999888887766311 0 12 88888899999996 4566
Q ss_pred HHHHHHhc
Q 018190 338 HLFSSFVH 345 (359)
Q Consensus 338 ~mi~~fl~ 345 (359)
..+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66667774
No 104
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=84.20 E-value=2.2 Score=38.97 Aligned_cols=61 Identities=26% Similarity=0.483 Sum_probs=43.1
Q ss_pred ceEEEeCCCCcc------------------------cccccCCCCCCC---CchHhHHHHHHHHHHHHHHCCCCCCCceE
Q 018190 8 NLLFVESPAGVG------------------------WSYSNTTSDYNC---GDASTARDMHVFMMNWYEKFPEFKSRELF 60 (359)
Q Consensus 8 nvlfiDqPvG~G------------------------FSy~~~~~~~~~---~~~~~a~d~~~fL~~F~~~fP~~~~~~~y 60 (359)
.+|-|-.|+|+| |||-.+--.+.. .-.++++.+++.+..-....|+=..-++|
T Consensus 33 ~~lvV~~pTGtGWVdp~a~~a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~ 112 (289)
T PF10081_consen 33 KVLVVATPTGTGWVDPWAVDALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLY 112 (289)
T ss_pred ceEEEEcCCCCCccCHHHHhHHHHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEE
Confidence 467888899999 555332212211 22456777889998888899886655699
Q ss_pred EEcccccc
Q 018190 61 LTGESYAG 68 (359)
Q Consensus 61 i~GESYgG 68 (359)
|+|||-|.
T Consensus 113 l~GeSLGa 120 (289)
T PF10081_consen 113 LYGESLGA 120 (289)
T ss_pred EeccCccc
Confidence 99999876
No 105
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=83.40 E-value=3 Score=35.85 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=44.7
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
.+++.+|+| |.|.|. .. . ......++ .+..|++.+ ...++.|.|.|+|| .++..+..+..
T Consensus 51 ~~~~~~d~~-g~g~s~-~~--~--~~~~~~~~----~~~~~~~~~---~~~~~~l~G~S~Gg----~~~~~~~~~~p--- 110 (282)
T COG0596 51 YRVIAPDLR-GHGRSD-PA--G--YSLSAYAD----DLAALLDAL---GLEKVVLVGHSMGG----AVALALALRHP--- 110 (282)
T ss_pred eEEEEeccc-CCCCCC-cc--c--ccHHHHHH----HHHHHHHHh---CCCceEEEEecccH----HHHHHHHHhcc---
Confidence 689999999 999996 11 0 01111133 344444433 22339999999998 55555544332
Q ss_pred CceeeeeEeEecCCcCC
Q 018190 87 GFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~ 103 (359)
-.++++++.++...
T Consensus 111 ---~~~~~~v~~~~~~~ 124 (282)
T COG0596 111 ---DRVRGLVLIGPAPP 124 (282)
T ss_pred ---hhhheeeEecCCCC
Confidence 25677777776654
No 106
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=83.08 E-value=2.8 Score=40.35 Aligned_cols=67 Identities=22% Similarity=0.359 Sum_probs=44.8
Q ss_pred ccceEEEe-------CCCCcccccccCCC-CCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHH
Q 018190 6 ASNLLFVE-------SPAGVGWSYSNTTS-DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (359)
Q Consensus 6 ~anvlfiD-------qPvG~GFSy~~~~~-~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~ 77 (359)
.|-|+|++ +|.|.- ||.+... +| .+.+|+-+|+-..|+ ++++-+.=+..|+..+|-|||| +||..
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy-LtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGG----MLaAW 183 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY-LTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGG----MLAAW 183 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc-ccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhh----HHHHH
Confidence 45677887 788887 6644331 22 356676677665554 4444444457799999999999 78877
Q ss_pred HH
Q 018190 78 LL 79 (359)
Q Consensus 78 i~ 79 (359)
+-
T Consensus 184 fR 185 (492)
T KOG2183|consen 184 FR 185 (492)
T ss_pred HH
Confidence 63
No 107
>PLN02571 triacylglycerol lipase
Probab=83.00 E-value=4.4 Score=39.36 Aligned_cols=68 Identities=10% Similarity=0.084 Sum_probs=47.2
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC----CCCceeeeeEeEecCCcCC
Q 018190 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH----SKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~----~~~~~inLkGi~IGng~~~ 103 (359)
.+.++++..|+.+.+.+|.. ..+++|+|+|-||-.+-..|..|....-. .....+++..+..|.|-+.
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 45677889999999988865 34799999999997776666666542111 0011356777888887765
No 108
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=82.65 E-value=4.1 Score=39.00 Aligned_cols=45 Identities=20% Similarity=0.339 Sum_probs=36.3
Q ss_pred CCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 56 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 56 ~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
..++.|.|+|-||+-+-.+.+++.+.+.. ..+ |++++.+||+++.
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~P-k~~iLISPWv~l~ 238 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKKPNKL----PYP-KSAILISPWVNLV 238 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhhcCCC----CCC-ceeEEECCCcCCc
Confidence 46899999999999999999888765532 122 6899999999986
No 109
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=82.42 E-value=3.2 Score=33.14 Aligned_cols=46 Identities=30% Similarity=0.517 Sum_probs=33.9
Q ss_pred HHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCC
Q 018190 254 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM 327 (359)
Q Consensus 254 LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHm 327 (359)
+-...++|++..|..|.+++....+.+.+.+. .+ -.++.|.|+||+
T Consensus 100 ~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LAKIRIPVLFIHGENDPLVPPEQVRRLYEALP---------------------------GP-KELYIIPGAGHF 145 (145)
T ss_dssp HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---------------------------SS-EEEEEETTS-TT
T ss_pred hhccCCcEEEEEECCCCcCCHHHHHHHHHHcC---------------------------CC-cEEEEeCCCcCc
Confidence 33456799999999999999888888777651 11 566889999996
No 110
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=81.73 E-value=4.7 Score=33.16 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 36 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 36 ~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
+++.+...++.....+|. .+++|+|+|-||..+-.+|..+.++.. .-..+-+..|.|-+
T Consensus 10 ~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 10 LANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 344555555565555564 589999999999888777777765431 12445566665544
No 111
>PRK10985 putative hydrolase; Provisional
Probab=81.59 E-value=7.7 Score=36.35 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=34.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCC
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 332 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq 332 (359)
.+++||.+|+.|.+++....+.+.+ + ..+ ..++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~-~---------------------------~~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPES-L---------------------------PPN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHH-h---------------------------CCC-eEEEECCCCCceeeCCC
Confidence 6899999999999998765543321 1 023 77888999999988764
No 112
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=81.49 E-value=4.6 Score=38.86 Aligned_cols=84 Identities=12% Similarity=-0.005 Sum_probs=47.2
Q ss_pred ccceEEEeCCCCcccccccCCC----CCCCC---chHhHHHHHHHHHHHHHHCCCCCCCc-eEEEcccccceehHHHHHH
Q 018190 6 ASNLLFVESPAGVGWSYSNTTS----DYNCG---DASTARDMHVFMMNWYEKFPEFKSRE-LFLTGESYAGHYIPQLADV 77 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~----~~~~~---~~~~a~d~~~fL~~F~~~fP~~~~~~-~yi~GESYgG~yvP~la~~ 77 (359)
...||-+|.|-+.|.|.+..+. ..... ...+-+++.+.+..|++.. .-.+ ++|.|.|.|| .+|..
T Consensus 91 ~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg----~ia~~ 163 (379)
T PRK00175 91 RYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL---GITRLAAVVGGSMGG----MQALE 163 (379)
T ss_pred ceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh---CCCCceEEEEECHHH----HHHHH
Confidence 4579999999545556432210 00000 0123344555555555543 2235 5999999999 55555
Q ss_pred HHhhhcCCCCceeeeeEeEecCCcC
Q 018190 78 LLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 78 i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
+..+. .-.++++++.|+..
T Consensus 164 ~a~~~------p~~v~~lvl~~~~~ 182 (379)
T PRK00175 164 WAIDY------PDRVRSALVIASSA 182 (379)
T ss_pred HHHhC------hHhhhEEEEECCCc
Confidence 54433 23578999988644
No 113
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=81.24 E-value=3.1 Score=39.50 Aligned_cols=62 Identities=15% Similarity=0.237 Sum_probs=44.4
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCCh---
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--- 333 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP--- 333 (359)
-.++||+..|..|.++|...++.+.+.+. . .+ .++.++ .+||+.+.+.|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--------~------------------~~-~~~~~~-~~gH~~~~~~~~~~ 336 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVS--------S------------------ED-YTELSF-PGGHIGIYVSGKAQ 336 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcC--------C------------------CC-eEEEEc-CCCCEEEEECchhH
Confidence 36899999999999999998887776441 0 11 444444 48999988766
Q ss_pred HHHHHHHHHHhcC
Q 018190 334 SRALHLFSSFVHG 346 (359)
Q Consensus 334 ~~a~~mi~~fl~~ 346 (359)
+.+..-+..|+..
T Consensus 337 ~~v~~~i~~wl~~ 349 (350)
T TIGR01836 337 KEVPPAIGKWLQA 349 (350)
T ss_pred hhhhHHHHHHHHh
Confidence 5566666677743
No 114
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=81.23 E-value=5.3 Score=38.61 Aligned_cols=76 Identities=25% Similarity=0.354 Sum_probs=51.6
Q ss_pred CCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeee
Q 018190 14 SPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIK 93 (359)
Q Consensus 14 qPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLk 93 (359)
.+-|.|-|--+++.-|... -.+|+-.+++.--++||+ +++|.+|.|+||. .+..++-+..++. -=..
T Consensus 161 N~RG~~g~~LtTpr~f~ag---~t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~---iL~nYLGE~g~~~----~l~~ 227 (409)
T KOG1838|consen 161 NHRGLGGSKLTTPRLFTAG---WTEDLREVVNHIKKRYPQ---APLFAVGFSMGGN---ILTNYLGEEGDNT----PLIA 227 (409)
T ss_pred CCCCCCCCccCCCceeecC---CHHHHHHHHHHHHHhCCC---CceEEEEecchHH---HHHHHhhhccCCC----Ccee
Confidence 4566666665554433222 246777777777778885 6999999999996 6667776655432 2357
Q ss_pred EeEecCCcC
Q 018190 94 GVAIGNPLL 102 (359)
Q Consensus 94 Gi~IGng~~ 102 (359)
|++|-|||-
T Consensus 228 a~~v~~Pwd 236 (409)
T KOG1838|consen 228 AVAVCNPWD 236 (409)
T ss_pred EEEEeccch
Confidence 899999984
No 115
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=80.05 E-value=4.8 Score=36.70 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=53.9
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
..++.+|. -|+|-|.+.-.. .....++|.++.+ +|+..-| ..+-.+-++|-||+|......|. .+
T Consensus 58 Y~vV~~D~-RG~g~S~G~~~~----~~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~----~~---- 122 (272)
T PF02129_consen 58 YAVVVQDV-RGTGGSEGEFDP----MSPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAA----RR---- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-T----TSHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHT----TT----
T ss_pred CEEEEECC-cccccCCCcccc----CChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHh----cC----
Confidence 45788995 499999876542 1455677777754 6666655 44457999999999965555543 22
Q ss_pred CceeeeeEeEecCCcCCCCC
Q 018190 87 GFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~p~~ 106 (359)
.-.||.|+..-++.|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 246999999998887654
No 116
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.00 E-value=4.6 Score=35.70 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCC
Q 018190 40 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 40 ~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~ 103 (359)
+...++...+++| +.+++++|+|-||-.+-.+|..+.++.. ..+++.+..|.|-+.
T Consensus 114 ~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~-----~~~i~~~tFg~P~vg 169 (229)
T cd00519 114 VLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGP-----GSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCC-----CCceEEEEeCCCCCC
Confidence 3445555555555 4579999999999777766666665431 246889999987763
No 117
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=78.29 E-value=4.8 Score=32.10 Aligned_cols=68 Identities=22% Similarity=0.323 Sum_probs=40.6
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
.+++.+|.| |.|-|.. ...++++++.+. ...+ ..++++|+|.|.||..+. .+..++
T Consensus 27 ~~v~~~~~~-~~~~~~~----------~~~~~~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~----~~~~~~---- 82 (145)
T PF12695_consen 27 YAVVAFDYP-GHGDSDG----------ADAVERVLADIR---AGYP--DPDRIILIGHSMGGAIAA----NLAARN---- 82 (145)
T ss_dssp EEEEEESCT-TSTTSHH----------SHHHHHHHHHHH---HHHC--TCCEEEEEEETHHHHHHH----HHHHHS----
T ss_pred CEEEEEecC-CCCccch----------hHHHHHHHHHHH---hhcC--CCCcEEEEEEccCcHHHH----HHhhhc----
Confidence 567778877 5555521 112333333332 3333 457999999999995444 444333
Q ss_pred CceeeeeEeEecCCc
Q 018190 87 GFKFNIKGVAIGNPL 101 (359)
Q Consensus 87 ~~~inLkGi~IGng~ 101 (359)
-.+++++.-+|+
T Consensus 83 ---~~v~~~v~~~~~ 94 (145)
T PF12695_consen 83 ---PRVKAVVLLSPY 94 (145)
T ss_dssp ---TTESEEEEESES
T ss_pred ---cceeEEEEecCc
Confidence 257788888884
No 118
>PRK10985 putative hydrolase; Provisional
Probab=78.25 E-value=6.5 Score=36.84 Aligned_cols=55 Identities=16% Similarity=0.158 Sum_probs=30.0
Q ss_pred ceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccce
Q 018190 8 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 69 (359)
Q Consensus 8 nvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~ 69 (359)
+++-+|.+ |.|=|-......+... ..+|+..+++..-+.+| ..++++.|.|.||.
T Consensus 89 ~v~~~d~r-G~g~~~~~~~~~~~~~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~ 143 (324)
T PRK10985 89 LGVVMHFR-GCSGEPNRLHRIYHSG---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGN 143 (324)
T ss_pred EEEEEeCC-CCCCCccCCcceECCC---chHHHHHHHHHHHHhCC---CCCEEEEEecchHH
Confidence 56777876 6553322111111111 24555555543334454 46799999999994
No 119
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=78.24 E-value=2.7 Score=42.38 Aligned_cols=85 Identities=12% Similarity=0.052 Sum_probs=49.3
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
..|+=||-+ |-|.|....+ -++.+.+.+..+|..+.+.. ...++++.|.|-||..+-.....+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADKT-----FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCcccccCC-----hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 346667765 6676633211 12333345666777666543 35689999999999654432222222210
Q ss_pred CceeeeeEeEecCCcCCCC
Q 018190 87 GFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~p~ 105 (359)
.-.++++.+-+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 11478888887777754
No 120
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=78.09 E-value=7 Score=37.04 Aligned_cols=84 Identities=12% Similarity=0.035 Sum_probs=47.5
Q ss_pred cccceEEEeCCCC--cccccccC--CCCCCCC---chHhHHHHHHHHHHHHHHCCCCCCCc-eEEEcccccceehHHHHH
Q 018190 5 KASNLLFVESPAG--VGWSYSNT--TSDYNCG---DASTARDMHVFMMNWYEKFPEFKSRE-LFLTGESYAGHYIPQLAD 76 (359)
Q Consensus 5 ~~anvlfiDqPvG--~GFSy~~~--~~~~~~~---~~~~a~d~~~fL~~F~~~fP~~~~~~-~yi~GESYgG~yvP~la~ 76 (359)
+...||=+|.| | .|-|-..+ ..+.... ...+.+++.+.+..+.+.. .+ .+ ++|.|.|.|| .+|.
T Consensus 71 ~~~~vi~~D~~-G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~--~~~~~l~G~S~Gg----~ia~ 142 (351)
T TIGR01392 71 DRYFVVCSNVL-GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL-GI--EQIAAVVGGSMGG----MQAL 142 (351)
T ss_pred CceEEEEecCC-CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc-CC--CCceEEEEECHHH----HHHH
Confidence 34689999999 6 55442111 0010000 0123445555555555543 22 34 9999999999 6666
Q ss_pred HHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 77 VLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 77 ~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
.+..+. +-.++++++.++..
T Consensus 143 ~~a~~~------p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 143 EWAIDY------PERVRAIVVLATSA 162 (351)
T ss_pred HHHHHC------hHhhheEEEEccCC
Confidence 655443 23578888888654
No 121
>PLN02753 triacylglycerol lipase
Probab=77.81 E-value=7.3 Score=38.90 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=48.2
Q ss_pred chHhHHHHHHHHHHHHHHCCC--CCCCceEEEcccccceehHHHHHHHHhhhcC--CCCceeeeeEeEecCCcCC
Q 018190 33 DASTARDMHVFMMNWYEKFPE--FKSRELFLTGESYAGHYIPQLADVLLDHNAH--SKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 33 ~~~~a~d~~~fL~~F~~~fP~--~~~~~~yi~GESYgG~yvP~la~~i~~~n~~--~~~~~inLkGi~IGng~~~ 103 (359)
...+.++++..++...+.+|. .....++|+|+|-||-.+-..|..|...... .....+++.-+..|.|-+.
T Consensus 286 k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 286 KFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred hhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 345678889999999998874 2356899999999997766666666542111 1112355667777777664
No 122
>PLN00021 chlorophyllase
Probab=77.03 E-value=12 Score=35.11 Aligned_cols=85 Identities=13% Similarity=0.062 Sum_probs=47.2
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHH-CC---CCCCCceEEEcccccceehHHHHHHHHhhh
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK-FP---EFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~-fP---~~~~~~~yi~GESYgG~yvP~la~~i~~~n 82 (359)
..|+.+|-+ | ++.... ..+-+.+.++..+|.+-++. .| +....+++|.|+|.||..+=.+|. +.
T Consensus 80 ~~VvapD~~-g--~~~~~~-----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~----~~ 147 (313)
T PLN00021 80 FIVVAPQLY-T--LAGPDG-----TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALAL----GK 147 (313)
T ss_pred CEEEEecCC-C--cCCCCc-----hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHh----hc
Confidence 457778876 2 332111 12223456666666654432 22 233467999999999954444443 22
Q ss_pred cCCCCceeeeeEeEecCCcCCC
Q 018190 83 AHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 83 ~~~~~~~inLkGi~IGng~~~p 104 (359)
... .....+++++.-+|+...
T Consensus 148 ~~~-~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 148 AAV-SLPLKFSALIGLDPVDGT 168 (313)
T ss_pred ccc-ccccceeeEEeecccccc
Confidence 211 113568898888887543
No 123
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=76.67 E-value=8.6 Score=34.21 Aligned_cols=88 Identities=16% Similarity=0.105 Sum_probs=53.9
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
++...|+-|.+.+.=.+-....+..+-.+.++.+...+..+.. ..+++.|+|.|-|+.-+-...+++.+.....
T Consensus 3 ~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~- 76 (225)
T PF08237_consen 3 YNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP- 76 (225)
T ss_pred cceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC-
Confidence 3566788887544321111112223445556677777777765 5789999999999955555555554432211
Q ss_pred CceeeeeEeEecCCcC
Q 018190 87 GFKFNIKGVAIGNPLL 102 (359)
Q Consensus 87 ~~~inLkGi~IGng~~ 102 (359)
.-+|+.+++|||--
T Consensus 77 --~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 77 --PDDLSFVLIGNPRR 90 (225)
T ss_pred --cCceEEEEecCCCC
Confidence 24789999999753
No 124
>PLN02719 triacylglycerol lipase
Probab=75.46 E-value=9.3 Score=38.06 Aligned_cols=69 Identities=16% Similarity=0.199 Sum_probs=47.2
Q ss_pred HhHHHHHHHHHHHHHHCCCC--CCCceEEEcccccceehHHHHHHHHhhhcC--CCCceeeeeEeEecCCcCC
Q 018190 35 STARDMHVFMMNWYEKFPEF--KSRELFLTGESYAGHYIPQLADVLLDHNAH--SKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~--~~~~~yi~GESYgG~yvP~la~~i~~~n~~--~~~~~inLkGi~IGng~~~ 103 (359)
.+.++++..|+...+.+|.. ....+.|+|+|-||-.+-..|..|.+..-. .....+++.-+..|.|-+.
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 45677889999999999865 345799999999997777666667653211 1011345566777776664
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=74.43 E-value=2.6 Score=36.81 Aligned_cols=70 Identities=17% Similarity=0.081 Sum_probs=47.0
Q ss_pred cccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEe
Q 018190 18 VGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAI 97 (359)
Q Consensus 18 ~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~I 97 (359)
|||-+++.. ++.+++..++.++++--|+.+|.-+ .+-+.|+|-|.| ||..++.+.. .-.+.|+++
T Consensus 103 vgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAH----La~qav~R~r-----~prI~gl~l 167 (270)
T KOG4627|consen 103 VGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAH----LAAQAVMRQR-----SPRIWGLIL 167 (270)
T ss_pred eccCcCccc----ccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHH----HHHHHHHHhc-----CchHHHHHH
Confidence 566665432 5678899999999988888888643 499999999985 4444433321 124566666
Q ss_pred cCCcC
Q 018190 98 GNPLL 102 (359)
Q Consensus 98 Gng~~ 102 (359)
-.|+-
T Consensus 168 ~~GvY 172 (270)
T KOG4627|consen 168 LCGVY 172 (270)
T ss_pred HhhHh
Confidence 66653
No 126
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=74.17 E-value=5.3 Score=42.25 Aligned_cols=87 Identities=20% Similarity=0.086 Sum_probs=53.8
Q ss_pred cceEEEeCCCCcccccccCCCCCC--CCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYN--CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~--~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+=++.|| +.|+|+.=.+-..... ..+ ...+|.....+.+.+.+ -.-...+.|+|-|||| +++..++.+...
T Consensus 559 ~~v~~vd-~RGs~~~G~~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGG----y~t~~~l~~~~~ 631 (755)
T KOG2100|consen 559 FAVLQVD-GRGSGGYGWDFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGG----YLTLKLLESDPG 631 (755)
T ss_pred eEEEEEc-CCCcCCcchhHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHH----HHHHHHhhhCcC
Confidence 3467778 6788765321111111 122 23567777777777665 3344569999999999 999998876531
Q ss_pred CCCceeeeeEeEecCCcCCCC
Q 018190 85 SKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~~~p~ 105 (359)
--+|.-+.-+|++|..
T Consensus 632 -----~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 632 -----DVFKCGVAVAPVTDWL 647 (755)
T ss_pred -----ceEEEEEEecceeeee
Confidence 2355546677877753
No 127
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=74.05 E-value=8.3 Score=36.20 Aligned_cols=54 Identities=28% Similarity=0.417 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCc
Q 018190 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 101 (359)
Q Consensus 38 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~ 101 (359)
+|+..||..-...+| .++||.+|-|.||. ++|.++.++-+.. ....++.+-+|+
T Consensus 132 ~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d~----~~~aa~~vs~P~ 185 (345)
T COG0429 132 EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDDL----PLDAAVAVSAPF 185 (345)
T ss_pred hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccCc----ccceeeeeeCHH
Confidence 777777766666676 48999999999996 7888888766542 235677776665
No 128
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=71.66 E-value=7.1 Score=34.90 Aligned_cols=87 Identities=14% Similarity=0.174 Sum_probs=48.4
Q ss_pred CcccccccCCC--CCCCCchHhHHHHHHHHHHHHHHCCCC-CCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeee
Q 018190 17 GVGWSYSNTTS--DYNCGDASTARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIK 93 (359)
Q Consensus 17 G~GFSy~~~~~--~~~~~~~~~a~d~~~fL~~F~~~fP~~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLk 93 (359)
-++||...... .|. .+.+.|...-..|..|+...-+. ...+++|.++|-|+.-+-..-+.+....... ...-.|.
T Consensus 51 ~i~FsWPS~g~~~~Y~-~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~-~~~~~~~ 128 (233)
T PF05990_consen 51 VILFSWPSDGSLLGYF-YDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERP-DVKARFD 128 (233)
T ss_pred EEEEEcCCCCChhhhh-hhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccch-hhHhhhh
Confidence 35566543332 222 23334444444444444432222 3578999999999976555555554443210 1123788
Q ss_pred EeEecCCcCCCC
Q 018190 94 GVAIGNPLLRLD 105 (359)
Q Consensus 94 Gi~IGng~~~p~ 105 (359)
.|++.+|-++..
T Consensus 129 ~viL~ApDid~d 140 (233)
T PF05990_consen 129 NVILAAPDIDND 140 (233)
T ss_pred eEEEECCCCCHH
Confidence 999999888753
No 129
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=71.55 E-value=6.9 Score=35.32 Aligned_cols=60 Identities=22% Similarity=0.312 Sum_probs=44.1
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
..+|||++|..|-++|..-..+..+..+ .+ .-..+|+||||--..--| .-+
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k--------~~--------------------~epl~v~g~gH~~~~~~~-~yi 242 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK--------EK--------------------VEPLWVKGAGHNDIELYP-EYI 242 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc--------cc--------------------CCCcEEecCCCcccccCH-HHH
Confidence 4599999999999999988777665320 11 345789999999876655 556
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
+.+++|+..
T Consensus 243 ~~l~~f~~~ 251 (258)
T KOG1552|consen 243 EHLRRFISS 251 (258)
T ss_pred HHHHHHHHH
Confidence 666777753
No 130
>PRK14567 triosephosphate isomerase; Provisional
Probab=71.43 E-value=10 Score=34.40 Aligned_cols=61 Identities=20% Similarity=0.333 Sum_probs=44.6
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.+.++++..|+++++..+-+-....+=|- |||.--|.=+..|++.. ++.|+.||.+.++|.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 46688999999999876421111222222 99999999999998643 689999999998764
No 131
>PRK14566 triosephosphate isomerase; Provisional
Probab=71.30 E-value=10 Score=34.48 Aligned_cols=61 Identities=21% Similarity=0.401 Sum_probs=44.6
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.+.|+++..|+++++...-.-....+=|- |||.--|.-+..|+... ++.|+.||..-++|.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 45689999999999975411111222222 99999999999998643 689999999988873
No 132
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=71.16 E-value=11 Score=35.13 Aligned_cols=64 Identities=17% Similarity=0.264 Sum_probs=49.2
Q ss_pred CCccEEEEecCCCcccC-chhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCCh--
Q 018190 257 NGIPVWVFSGDQDSVVP-LLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP-- 333 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~-~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP-- 333 (359)
..++|||.+|..|.++. ..+...+.+.+ +.. + -+++.+.||-|.+-.+.+
T Consensus 227 ~~~PvLll~g~~D~vv~~~~~~~~~~~~~----~~~----------------------~-~~~~~~~g~~He~~~E~~~~ 279 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVEGLARFFERA----GSP----------------------D-KELKVIPGAYHELLNEPDRA 279 (298)
T ss_pred ccCCEEEEecCCCccccCcHHHHHHHHhc----CCC----------------------C-ceEEecCCcchhhhcCcchH
Confidence 47999999999999999 57777777644 211 1 566888999999987765
Q ss_pred -HHHHHHHHHHhcCC
Q 018190 334 -SRALHLFSSFVHGR 347 (359)
Q Consensus 334 -~~a~~mi~~fl~~~ 347 (359)
+.+++.+..|+...
T Consensus 280 r~~~~~~~~~~l~~~ 294 (298)
T COG2267 280 REEVLKDILAWLAEA 294 (298)
T ss_pred HHHHHHHHHHHHHhh
Confidence 47788888888654
No 133
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=70.98 E-value=1.2 Score=42.24 Aligned_cols=71 Identities=17% Similarity=0.255 Sum_probs=45.5
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
...|||-||=-.+..-.|... ..+...+++.+-.||+...+.+ .+...++||.|.|-|+|-+=.+++++-.
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~a----~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQA----VANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHHH----HHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccch----hhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 367999999765554333221 2344556777777777776443 3445789999999999888777777765
No 134
>COG4425 Predicted membrane protein [Function unknown]
Probab=70.31 E-value=12 Score=36.49 Aligned_cols=35 Identities=26% Similarity=0.521 Sum_probs=30.1
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccc
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 68 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG 68 (359)
.++|+.+.+.+-......|+=+.-++|+.|||-|.
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 46788899999999999998776679999999986
No 135
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=69.87 E-value=9.5 Score=33.19 Aligned_cols=30 Identities=17% Similarity=0.117 Sum_probs=25.2
Q ss_pred cEEEEecCCCcccCchhHHHHHHHHHHhcC
Q 018190 260 PVWVFSGDQDSVVPLLGSRTLIRELARDLN 289 (359)
Q Consensus 260 rVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~ 289 (359)
+++|.+|..|.+||....+...+.|+.-.+
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~~~~ 199 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLKVYG 199 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHHhcC
Confidence 478999999999999999999998864433
No 136
>PRK11460 putative hydrolase; Provisional
Probab=69.70 E-value=21 Score=31.67 Aligned_cols=50 Identities=12% Similarity=-0.026 Sum_probs=28.7
Q ss_pred HHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 42 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 42 ~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
++++.+.+.. .....+++|.|.|.|| .+|..++..... .+.+++.-+|.+
T Consensus 89 ~~i~~~~~~~-~~~~~~i~l~GfS~Gg----~~al~~a~~~~~------~~~~vv~~sg~~ 138 (232)
T PRK11460 89 ETVRYWQQQS-GVGASATALIGFSQGA----IMALEAVKAEPG------LAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHhc-CCChhhEEEEEECHHH----HHHHHHHHhCCC------cceEEEEecccc
Confidence 3444333332 4456689999999999 555554433321 245566666654
No 137
>PLN02761 lipase class 3 family protein
Probab=68.44 E-value=17 Score=36.41 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=45.4
Q ss_pred HhHHHHHHHHHHHHHHCCCC---CCCceEEEcccccceehHHHHHHHHhhhcC---CCCceeeeeEeEecCCcCC
Q 018190 35 STARDMHVFMMNWYEKFPEF---KSRELFLTGESYAGHYIPQLADVLLDHNAH---SKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~---~~~~~yi~GESYgG~yvP~la~~i~~~n~~---~~~~~inLkGi~IGng~~~ 103 (359)
.+.++++..++...+.+|.. ....++|+|+|-||-.+-..|..|...+-. .....+++.-+..|.|-+.
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 46678889999999888643 234699999999997666666666542211 0012355667777776654
No 138
>PRK07868 acyl-CoA synthetase; Validated
Probab=68.32 E-value=8.8 Score=42.06 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=49.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEE-EEEcCCCCCCC---CCCh
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTF-VTVRGAAHMVP---YAQP 333 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf-~~V~~AGHmvP---~dqP 333 (359)
..+||+..|..|.++|...++.+.+.+ .+ ..+ ..+.++|||.+ -.-|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i----------------------------~~-a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAA----------------------------PN-AEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEEeCCCCCEeeeechhhh
Confidence 589999999999999999888876532 11 223 44578999954 3566
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCC
Q 018190 334 SRALHLFSSFVHGRRLPNNTRPA 356 (359)
Q Consensus 334 ~~a~~mi~~fl~~~~~~~~~~~~ 356 (359)
+...-.+.+||..++- .+.||+
T Consensus 348 ~~~wp~i~~wl~~~~~-~~~~~~ 369 (994)
T PRK07868 348 QQTWPTVADWVKWLEG-DGDKPE 369 (994)
T ss_pred hhhChHHHHHHHHhcc-CCCCCc
Confidence 7777888889975553 455553
No 139
>PRK11071 esterase YqiA; Provisional
Probab=67.31 E-value=14 Score=31.69 Aligned_cols=55 Identities=13% Similarity=0.190 Sum_probs=42.9
Q ss_pred CCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHH
Q 018190 257 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 336 (359)
Q Consensus 257 ~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 336 (359)
...+|+|.+|..|-++|+.-+.+..++ ...+.+.||+|.- ...+.+
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f--~~~~~~ 180 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAF--VGFERY 180 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcch--hhHHHh
Confidence 356899999999999999988876541 2234669999998 344888
Q ss_pred HHHHHHHhc
Q 018190 337 LHLFSSFVH 345 (359)
Q Consensus 337 ~~mi~~fl~ 345 (359)
+..+..|+.
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 999988874
No 140
>PLN02324 triacylglycerol lipase
Probab=66.79 E-value=21 Score=34.74 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=45.1
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC-----CCceeeeeEeEecCCcCC
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS-----KGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~-----~~~~inLkGi~IGng~~~ 103 (359)
..+.+++..-|+.+.+.+|.. ...+.|+|+|-||-.+-..|..|....... ....+++.-+..|.|-+.
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVG 266 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIG 266 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcC
Confidence 356677888899999988853 347999999999976666666665531110 011344556666666553
No 141
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=65.95 E-value=15 Score=35.88 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=43.0
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
.++||+.+|..|.++|....+.+.+.. .+ ..++.+.++ |+. .+|..++
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~----------------------------~~-~~l~~i~~~-~~~--e~~~~~~ 402 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS----------------------------AD-GKLLEIPFK-PVY--RNFDKAL 402 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEccCC-Ccc--CCHHHHH
Confidence 579999999999999999988665421 11 345667776 433 5999999
Q ss_pred HHHHHHhcC
Q 018190 338 HLFSSFVHG 346 (359)
Q Consensus 338 ~mi~~fl~~ 346 (359)
..+..||..
T Consensus 403 ~~i~~wL~~ 411 (414)
T PRK05077 403 QEISDWLED 411 (414)
T ss_pred HHHHHHHHH
Confidence 999999854
No 142
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=64.77 E-value=15 Score=31.71 Aligned_cols=65 Identities=15% Similarity=0.239 Sum_probs=50.6
Q ss_pred CCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 31 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 31 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
.+-+++|.|+-+.++.+.++. ..+.+-|.|-|+|.--+|.+..++-..-+ -.++++.+-.+-...
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPSTTA 109 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCCcc
Confidence 467899999999999888764 56789999999999999999988765443 256777776655443
No 143
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=64.75 E-value=4.6 Score=34.81 Aligned_cols=52 Identities=23% Similarity=0.377 Sum_probs=33.7
Q ss_pred HHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCCCc
Q 018190 41 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDV 108 (359)
Q Consensus 41 ~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~~~ 108 (359)
...+....+.. ....+.|.|-|-||-|+-.+|.+ .+++. ++.||.+.|...+
T Consensus 46 ~~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~------------~~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 46 IAQLEQLIEEL---KPENVVLIGSSLGGFYATYLAER------------YGLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHH------------hCCCE-EEEcCCCCHHHHH
Confidence 34445555443 33459999999999666666542 24455 6779999886543
No 144
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=63.25 E-value=13 Score=32.68 Aligned_cols=47 Identities=23% Similarity=0.376 Sum_probs=31.3
Q ss_pred HHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 45 MNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 45 ~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
.+|++.+|+.....+-|.|-|.|| .+|-.+..... .++.++..+|.-
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGa----elALllAs~~~-------~i~avVa~~ps~ 56 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGA----ELALLLASRFP-------QISAVVAISPSS 56 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHH----HHHHHHHHHSS-------SEEEEEEES--S
T ss_pred HHHHHhCCCCCCCCEEEEEECHHH----HHHHHHHhcCC-------CccEEEEeCCce
Confidence 468889999998999999999999 44444443321 567777766553
No 145
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=62.92 E-value=30 Score=29.03 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=43.2
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
..+++-+|.| |.|.+-.. ..+.+..++.....+. ...+ ..++.+.|.|.||.-+-.+|..+..+.
T Consensus 25 ~~~v~~~~~~-g~~~~~~~-----~~~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~--- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEPL-----PASADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARG--- 89 (212)
T ss_pred CccEEEecCC-CCCCCCCC-----CCCHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCC---
Confidence 4578888877 55543211 1233334444444333 2333 468999999999977666666665432
Q ss_pred CCceeeeeEeEecCC
Q 018190 86 KGFKFNIKGVAIGNP 100 (359)
Q Consensus 86 ~~~~inLkGi~IGng 100 (359)
..++++++.++
T Consensus 90 ----~~~~~l~~~~~ 100 (212)
T smart00824 90 ----IPPAAVVLLDT 100 (212)
T ss_pred ----CCCcEEEEEcc
Confidence 23556655544
No 146
>PLN02408 phospholipase A1
Probab=59.82 E-value=24 Score=33.78 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCC
Q 018190 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~ 103 (359)
.+.+++..-++.+.+.+|.. ...++|+|+|-||-.+-..|..|...-.. ...+.-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCcc
Confidence 45567788899999998864 34699999999997666666666543211 013445566655553
No 147
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=59.70 E-value=21 Score=33.85 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCC
Q 018190 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 38 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~ 103 (359)
..+.+-++.....+| +..++|+|+|=||-++...|..|....... ..+++=+--|-|-+.
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~~---~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLKT---SSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCCC---CCceEEEEecCCCcc
Confidence 344455556666677 568999999999999999999998765431 356666777766553
No 148
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=58.30 E-value=54 Score=30.29 Aligned_cols=64 Identities=19% Similarity=0.125 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHCC--CCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCC
Q 018190 37 ARDMHVFMMNWYEKFP--EFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 37 a~d~~~fL~~F~~~fP--~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~ 106 (359)
.+|.+..++...+.-. ....+.+.|+|+|=||+-+-.++....++. ...+++.++..|++|...
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3444555544443322 234678999999999988887777776552 246788999999999865
No 149
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=58.21 E-value=24 Score=33.39 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=48.1
Q ss_pred eCCCCcccccc---------cCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhc
Q 018190 13 ESPAGVGWSYS---------NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNA 83 (359)
Q Consensus 13 DqPvG~GFSy~---------~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 83 (359)
-.|+..|||.- .+.-.+++++..+++.+.+|-.+=+ .|+..++.|.|-|-||.-+...|. +
T Consensus 262 ~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs-----~- 331 (517)
T KOG1553|consen 262 NTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAAS-----N- 331 (517)
T ss_pred cChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhh-----c-
Confidence 45666666641 2223456676666655555544433 677889999999999976665552 2
Q ss_pred CCCCceeeeeEeEecCCcC
Q 018190 84 HSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 84 ~~~~~~inLkGi~IGng~~ 102 (359)
.-++|++++-.-+=
T Consensus 332 -----YPdVkavvLDAtFD 345 (517)
T KOG1553|consen 332 -----YPDVKAVVLDATFD 345 (517)
T ss_pred -----CCCceEEEeecchh
Confidence 45789988765443
No 150
>PLN02802 triacylglycerol lipase
Probab=57.31 E-value=26 Score=34.95 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=42.6
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCC
Q 018190 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~ 103 (359)
.+.+++..-++.+++.+|.- ...++|+|+|-||-..-..|..|...... .+.+.-+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 34567778888888887753 24799999999997666666666543221 124556666766654
No 151
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=55.98 E-value=22 Score=31.04 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=29.8
Q ss_pred CCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCCC
Q 018190 54 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQD 107 (359)
Q Consensus 54 ~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~~ 107 (359)
...++++|.|-|=|| ++|..+.-... -.|.|++.-+|++-+..+
T Consensus 102 i~~~ri~l~GFSQGa----~~al~~~l~~p------~~~~gvv~lsG~~~~~~~ 145 (216)
T PF02230_consen 102 IDPSRIFLGGFSQGA----AMALYLALRYP------EPLAGVVALSGYLPPESE 145 (216)
T ss_dssp --GGGEEEEEETHHH----HHHHHHHHCTS------STSSEEEEES---TTGCC
T ss_pred CChhheehhhhhhHH----HHHHHHHHHcC------cCcCEEEEeecccccccc
Confidence 566789999999999 77777765442 368899999999865443
No 152
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=55.45 E-value=26 Score=34.61 Aligned_cols=40 Identities=13% Similarity=0.225 Sum_probs=28.6
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
++..+++.+.++.+++..+ .+++.|.|+|-|| .++..++.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGG----lva~~fl~ 181 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGG----LLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhH----HHHHHHHH
Confidence 3456677777777777643 5789999999999 55555443
No 153
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=55.05 E-value=19 Score=31.24 Aligned_cols=55 Identities=22% Similarity=0.314 Sum_probs=36.8
Q ss_pred CcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhh
Q 018190 17 GVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (359)
Q Consensus 17 G~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n 82 (359)
|||=|-++-.++ ..+.+.|....++|| .++|+-. .+.|+|-|+|+ ++|..++.+-
T Consensus 70 gVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa----~Ia~~la~r~ 124 (210)
T COG2945 70 GVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGA----YIAMQLAMRR 124 (210)
T ss_pred ccccccCcccCC--cchHHHHHHHHHHHH---hhCCCch--hhhhcccchHH----HHHHHHHHhc
Confidence 788887765544 344444555444443 4688744 37999999999 7777777654
No 154
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=53.95 E-value=30 Score=30.68 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHH
Q 018190 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 78 (359)
Q Consensus 38 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i 78 (359)
+.-..+|+...+.+|+ +++|+|+|=||..+-+.|..+
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~ 105 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANC 105 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHc
Confidence 3345677777776655 599999999995555544443
No 155
>PRK10115 protease 2; Provisional
Probab=53.52 E-value=38 Score=35.53 Aligned_cols=62 Identities=16% Similarity=0.076 Sum_probs=44.7
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCCC
Q 018190 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQD 107 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~~ 107 (359)
..-+|+....+...+. .--....+.|.|-|||| .++..++.+.. =.+++++.+.|++|....
T Consensus 503 ~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG----~l~~~~~~~~P------dlf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 503 NTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGG----MLMGVAINQRP------ELFHGVIAQVPFVDVVTT 564 (686)
T ss_pred CcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHH----HHHHHHHhcCh------hheeEEEecCCchhHhhh
Confidence 3467777777655544 32345679999999999 77777765432 258999999999998654
No 156
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=52.56 E-value=11 Score=27.78 Aligned_cols=35 Identities=9% Similarity=0.194 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 38 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
-|.|++.+.|+-.+ |-.+.|.+.|+|| .|-+-|.+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyr 41 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYR 41 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHH
Confidence 47888999998876 6788999999999 56666654
No 157
>PLN00413 triacylglycerol lipase
Probab=51.77 E-value=18 Score=35.82 Aligned_cols=38 Identities=18% Similarity=0.398 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHH
Q 018190 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (359)
Q Consensus 39 d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~ 79 (359)
++...|+++++.+|+ .+++|+|+|-||..+-..|..+.
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHH
Confidence 466778888888875 46999999999977666665554
No 158
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=51.72 E-value=25 Score=34.05 Aligned_cols=53 Identities=15% Similarity=0.034 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCceE-EEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCc
Q 018190 36 TARDMHVFMMNWYEKFPEFKSRELF-LTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 101 (359)
Q Consensus 36 ~a~d~~~fL~~F~~~fP~~~~~~~y-i~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~ 101 (359)
+.+|+.+.+..+++.. .-.+++ |.|.|.|| ++|..+..+.. -.++++++.++.
T Consensus 142 t~~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG----~ial~~a~~~P------~~v~~lv~ia~~ 195 (389)
T PRK06765 142 TILDFVRVQKELIKSL---GIARLHAVMGPSMGG----MQAQEWAVHYP------HMVERMIGVIGN 195 (389)
T ss_pred cHHHHHHHHHHHHHHc---CCCCceEEEEECHHH----HHHHHHHHHCh------HhhheEEEEecC
Confidence 3455555555555543 234576 99999999 77776665442 246777777654
No 159
>PLN02310 triacylglycerol lipase
Probab=51.69 E-value=40 Score=32.78 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=40.8
Q ss_pred HhHHHHHHHHHHHHHHCCCC-CCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCC
Q 018190 35 STARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~ 103 (359)
.+.+++..-++...+.+++- ....+.|+|+|-||-.+-..|..|.... ..+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 34566777778877776632 2457999999999965554444443321 1345666777777664
No 160
>PLN02429 triosephosphate isomerase
Probab=50.96 E-value=34 Score=32.02 Aligned_cols=61 Identities=21% Similarity=0.324 Sum_probs=43.4
Q ss_pred hHhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 34 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.+.++.+..|+++|+.. +.+-....+-|- |||---|.-+..|..+ .++.|+.||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 34578889999999864 322111222222 9999999999888764 3689999999998764
No 161
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=50.11 E-value=52 Score=31.06 Aligned_cols=55 Identities=9% Similarity=-0.011 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 38 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.++-.++....+..+ ..++++.|.|.||. ++........ -.++++++.++.++..
T Consensus 120 ~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~----i~~~~~~~~~------~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 120 GYIDKCVDYICRTSK---LDQISLLGICQGGT----FSLCYAALYP------DKIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHHhC---CCcccEEEECHHHH----HHHHHHHhCc------hheeeEEEeccccccC
Confidence 334455555555543 46899999999995 4433333221 1477887777777643
No 162
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=49.95 E-value=12 Score=36.07 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=22.9
Q ss_pred ceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCC
Q 018190 58 ELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 58 ~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~ 106 (359)
.+.++|+|||| +-|...+.+. ..++..++-|||+-|..
T Consensus 229 ~i~~~GHSFGG----ATa~~~l~~d-------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGG----ATALQALRQD-------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHH----HHHHHHHHH--------TT--EEEEES---TTS-
T ss_pred heeeeecCchH----HHHHHHHhhc-------cCcceEEEeCCcccCCC
Confidence 58999999999 4554444332 25678889999998854
No 163
>PRK13604 luxD acyl transferase; Provisional
Probab=49.86 E-value=64 Score=30.16 Aligned_cols=80 Identities=11% Similarity=0.198 Sum_probs=45.9
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcC
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 84 (359)
+-.|+|-.|.=-|.|=|-++-. +...+. ...|+...+ .|++.. ...++.|.|+|-|| .+|.....
T Consensus 63 ~G~~vLrfD~rg~~GeS~G~~~-~~t~s~--g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGg----ava~~~A~---- 127 (307)
T PRK13604 63 NGFHVIRYDSLHHVGLSSGTID-EFTMSI--GKNSLLTVV-DWLNTR---GINNLGLIAASLSA----RIAYEVIN---- 127 (307)
T ss_pred CCCEEEEecCCCCCCCCCCccc-cCcccc--cHHHHHHHH-HHHHhc---CCCceEEEEECHHH----HHHHHHhc----
Confidence 4467888897655687743221 111111 235553322 223322 13479999999999 44422221
Q ss_pred CCCceeeeeEeEecCCcCC
Q 018190 85 SKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 85 ~~~~~inLkGi~IGng~~~ 103 (359)
..+++++++..|..+
T Consensus 128 ----~~~v~~lI~~sp~~~ 142 (307)
T PRK13604 128 ----EIDLSFLITAVGVVN 142 (307)
T ss_pred ----CCCCCEEEEcCCccc
Confidence 135889999999887
No 164
>PLN02847 triacylglycerol lipase
Probab=49.84 E-value=36 Score=34.69 Aligned_cols=51 Identities=16% Similarity=0.308 Sum_probs=32.0
Q ss_pred HHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecC
Q 018190 41 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGN 99 (359)
Q Consensus 41 ~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGn 99 (359)
...|+.-+..+|+| ++.|+|+|.||--+-.++. ++..+.. .-+++.+..|-
T Consensus 238 ~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAi-lLRe~~~----fssi~CyAFgP 288 (633)
T PLN02847 238 TPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTY-ILREQKE----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHH-HHhcCCC----CCCceEEEecC
Confidence 34455556667765 6999999999976655544 4443322 23566666664
No 165
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=49.79 E-value=29 Score=29.29 Aligned_cols=42 Identities=24% Similarity=0.457 Sum_probs=32.4
Q ss_pred ccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCC
Q 018190 259 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY 330 (359)
Q Consensus 259 irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~ 330 (359)
++.+++.++.|..||+.-++.+.+.+. -.++.+.++||+-..
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~------------------------------a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG------------------------------AELIILGGGGHFNAA 156 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT-------------------------------EEEEETS-TTSSGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC------------------------------CCeEECCCCCCcccc
Confidence 555889999999999999998888661 567888999999764
No 166
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=49.65 E-value=74 Score=28.86 Aligned_cols=78 Identities=17% Similarity=0.262 Sum_probs=49.5
Q ss_pred cceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCC
Q 018190 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 86 (359)
.|+.=.|-- |-|+|.++.... +.-+..+..|++|++=+ . +..++.|+|.|=|-. | +-.++-+
T Consensus 89 ~nv~~~DYS-GyG~S~G~psE~---n~y~Di~avye~Lr~~~----g-~~~~Iil~G~SiGt~--~--tv~Lasr----- 150 (258)
T KOG1552|consen 89 CNVVSYDYS-GYGRSSGKPSER---NLYADIKAVYEWLRNRY----G-SPERIILYGQSIGTV--P--TVDLASR----- 150 (258)
T ss_pred ceEEEEecc-cccccCCCcccc---cchhhHHHHHHHHHhhc----C-CCceEEEEEecCCch--h--hhhHhhc-----
Confidence 456666765 899998866532 33333445555554322 2 567899999999873 3 2222222
Q ss_pred CceeeeeEeEecCCcCCCC
Q 018190 87 GFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 87 ~~~inLkGi~IGng~~~p~ 105 (359)
..+.|+++-+|+++-.
T Consensus 151 ---~~~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 151 ---YPLAAVVLHSPFTSGM 166 (258)
T ss_pred ---CCcceEEEeccchhhh
Confidence 2389999999998743
No 167
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=49.11 E-value=14 Score=23.67 Aligned_cols=33 Identities=9% Similarity=0.158 Sum_probs=24.2
Q ss_pred CCcCCCCCCchhhHHHHHHcCCCCHHHHHHHhc
Q 018190 99 NPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMS 131 (359)
Q Consensus 99 ng~~~p~~~~~~~~~~~~~~gli~~~~~~~~~~ 131 (359)
.|.+||.+-..--.+=|+..|+||.+....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377888876655566788999999998877653
No 168
>PLN02934 triacylglycerol lipase
Probab=48.94 E-value=50 Score=33.06 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHH
Q 018190 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (359)
Q Consensus 39 d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~ 79 (359)
.+...|+.+++.+|.+ +++|+|+|-||-.+-..|..|.
T Consensus 306 ~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHH
Confidence 4667788888888864 6999999999965555554444
No 169
>PLN02561 triosephosphate isomerase
Probab=47.65 E-value=42 Score=30.41 Aligned_cols=60 Identities=17% Similarity=0.292 Sum_probs=43.4
Q ss_pred hHhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 34 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
.+.++++..+++.++.. |..-....+-|- |||.--|.-+..|+.. .++.|++||.+.+++
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 35678888999998864 422222233222 9999999999988753 378999999999986
No 170
>PRK11071 esterase YqiA; Provisional
Probab=47.36 E-value=24 Score=30.25 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEcccccceehHHHH
Q 018190 40 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 75 (359)
Q Consensus 40 ~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la 75 (359)
..+++..+.+.. ..++++|.|.|.||.++-.+|
T Consensus 47 ~~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 47 AAELLESLVLEH---GGDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred HHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHH
Confidence 344555666543 345899999999995444444
No 171
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=46.95 E-value=57 Score=28.87 Aligned_cols=63 Identities=19% Similarity=0.194 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHC--CCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeE-eEecCCcCCCCC
Q 018190 37 ARDMHVFMMNWYEKF--PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKG-VAIGNPLLRLDQ 106 (359)
Q Consensus 37 a~d~~~fL~~F~~~f--P~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkG-i~IGng~~~p~~ 106 (359)
++.+-+.++...+.+ ..-..+++.|.|+|-|| .+|+.++...... .-++++ |.+|.|...|..
T Consensus 63 ~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGG----lvar~~l~~~~~~---~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 63 AEFLAEAIKYILELYKSNRPPPRSVILVGHSMGG----LVARSALSLPNYD---PDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCceEEEEEchhh----HHHHHHHhccccc---cccEEEEEEEcCCCCCccc
Confidence 444445555555544 22346789999999999 6777766543221 123444 457778776654
No 172
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=46.90 E-value=53 Score=29.59 Aligned_cols=58 Identities=26% Similarity=0.497 Sum_probs=42.6
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 35 STARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
+.++++..++++++.. +.+ ....+-|- |||--=|.=+..+++.. ++.|+.||.+.+++
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~ 234 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKA 234 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCH
Confidence 4578889999999864 422 22233333 99999998888888643 58999999999875
No 173
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=46.88 E-value=40 Score=35.83 Aligned_cols=68 Identities=10% Similarity=0.088 Sum_probs=41.0
Q ss_pred cceEEEeCCCCccccccc---------CCCC--C---------CCCchHhHHHHHHHHHHHH------H---HCCCCCCC
Q 018190 7 SNLLFVESPAGVGWSYSN---------TTSD--Y---------NCGDASTARDMHVFMMNWY------E---KFPEFKSR 57 (359)
Q Consensus 7 anvlfiDqPvG~GFSy~~---------~~~~--~---------~~~~~~~a~d~~~fL~~F~------~---~fP~~~~~ 57 (359)
..++-+|.| |.|-|... ..+. | ..+-.+...|++......- . .+..+...
T Consensus 477 y~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~ 555 (792)
T TIGR03502 477 VATIAIDHP-LHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS 555 (792)
T ss_pred cEEEEeCCC-CCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 468999999 99988322 1111 1 0134566677665433332 1 23345678
Q ss_pred ceEEEcccccceehHHHH
Q 018190 58 ELFLTGESYAGHYIPQLA 75 (359)
Q Consensus 58 ~~yi~GESYgG~yvP~la 75 (359)
++++.|+|-||.-...++
T Consensus 556 ~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 556 KVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred cEEEEecCHHHHHHHHHH
Confidence 999999999995555444
No 174
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=46.83 E-value=28 Score=30.41 Aligned_cols=48 Identities=29% Similarity=0.392 Sum_probs=30.3
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 334 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~ 334 (359)
.+++|-..|..|.+++...++...+..... +-+.....||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-----------------------------~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDPD-----------------------------ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHHH-----------------------------EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccCC-----------------------------cEEEEECCCCcCcCChhh
Confidence 689999999999999988888877754211 235557899999987664
No 175
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=45.64 E-value=23 Score=30.16 Aligned_cols=82 Identities=21% Similarity=0.263 Sum_probs=49.9
Q ss_pred eEEEeCCCCccc-ccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCC
Q 018190 9 LLFVESPAGVGW-SYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 87 (359)
Q Consensus 9 vlfiDqPvG~GF-Sy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 87 (359)
+--|+-|+..+. +|. .+..+.++++...++.+..+-|+ .+|.|.|-|=|+ .++..++........
T Consensus 42 ~~~V~YpA~~~~~~y~-------~S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA----~V~~~~~~~~~l~~~ 107 (179)
T PF01083_consen 42 VQGVEYPASLGPNSYG-------DSVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGA----MVVGDALSGDGLPPD 107 (179)
T ss_dssp EEE--S---SCGGSCH-------HHHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHH----HHHHHHHHHTTSSHH
T ss_pred EEecCCCCCCCccccc-------ccHHHHHHHHHHHHHHHHHhCCC---CCEEEEeccccc----HHHHHHHHhccCChh
Confidence 333677777776 343 24456678888999999999884 689999999999 566665555111111
Q ss_pred ceeeeeE-eEecCCcCCC
Q 018190 88 FKFNIKG-VAIGNPLLRL 104 (359)
Q Consensus 88 ~~inLkG-i~IGng~~~p 104 (359)
..-++.+ +.+|||.-.+
T Consensus 108 ~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHEEEEEEES-TTTBT
T ss_pred hhhhEEEEEEecCCcccC
Confidence 1235666 6889988754
No 176
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=45.50 E-value=46 Score=28.41 Aligned_cols=62 Identities=13% Similarity=0.106 Sum_probs=35.5
Q ss_pred cccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceeh
Q 018190 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYI 71 (359)
Q Consensus 5 ~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yv 71 (359)
+.|-|.|++.....+....--.. .--+..|.+|-.|+..+=..+ =..-.+-+.|+|||..-+
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~---~~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~ 123 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASP---GYARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVV 123 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCc---hHHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHH
Confidence 45677888655552211111111 112345677777877776555 113469999999999543
No 177
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=44.84 E-value=1.3e+02 Score=27.89 Aligned_cols=72 Identities=19% Similarity=0.306 Sum_probs=45.5
Q ss_pred eEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCc
Q 018190 9 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGF 88 (359)
Q Consensus 9 vlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 88 (359)
+|=|--| |-||+-..... .-+..+-..|++.|++.. ++. ..+.+.|+|-|+ .-|..+.-.+
T Consensus 65 ~I~iN~P-Gf~~t~~~~~~------~~~n~er~~~~~~ll~~l-~i~-~~~i~~gHSrGc----enal~la~~~------ 125 (297)
T PF06342_consen 65 FIGINYP-GFGFTPGYPDQ------QYTNEERQNFVNALLDEL-GIK-GKLIFLGHSRGC----ENALQLAVTH------ 125 (297)
T ss_pred EEEeCCC-CCCCCCCCccc------ccChHHHHHHHHHHHHHc-CCC-CceEEEEeccch----HHHHHHHhcC------
Confidence 3445667 77777543322 223445557888888765 454 567888999999 4444444322
Q ss_pred eeeeeEeEecCCc
Q 018190 89 KFNIKGVAIGNPL 101 (359)
Q Consensus 89 ~inLkGi~IGng~ 101 (359)
++.|+++.||.
T Consensus 126 --~~~g~~lin~~ 136 (297)
T PF06342_consen 126 --PLHGLVLINPP 136 (297)
T ss_pred --ccceEEEecCC
Confidence 46788888876
No 178
>PRK04940 hypothetical protein; Provisional
Probab=44.06 E-value=30 Score=29.59 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=25.8
Q ss_pred CceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCC
Q 018190 57 RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 57 ~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~ 106 (359)
.++.|.|-|-||-|+-.||. +- .++.| +.||.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~----~~--------g~~aV-LiNPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGF----LC--------GIRQV-IFNPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHH----HH--------CCCEE-EECCCCChHH
Confidence 47999999999966555554 32 34444 5589998854
No 179
>PRK14565 triosephosphate isomerase; Provisional
Probab=43.07 E-value=48 Score=29.77 Aligned_cols=54 Identities=15% Similarity=0.244 Sum_probs=40.4
Q ss_pred chHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 33 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 33 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
+.+.+++...+++++. + +.-|- |||.--|.-+..+.+. -++.|+.||.+.+++.
T Consensus 172 ~~e~i~~~~~~Ir~~~---~-----~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD---S-----KSHII---YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVD 225 (237)
T ss_pred CHHHHHHHHHHHHHhC---C-----CceEE---EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHH
Confidence 3456788888888873 1 22222 9999999999998863 2689999999999864
No 180
>PLN03037 lipase class 3 family protein; Provisional
Probab=42.92 E-value=68 Score=32.21 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 36 TARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 36 ~a~d~~~fL~~F~~~fP~~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
+.+++..-++...+.+|+. ....++|+|+|-||--+-..|..|...... ..++.-+..|.|-+
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRV 359 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRV 359 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCc
Confidence 3456777788888877753 345799999999996665555455433211 11344455555544
No 181
>PLN02162 triacylglycerol lipase
Probab=42.79 E-value=34 Score=33.78 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHH
Q 018190 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (359)
Q Consensus 39 d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~ 79 (359)
.+..-|+.++.++|+ .+++|+|+|-||-.+-..|..+.
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHH
Confidence 345566777777775 46999999999955544444443
No 182
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=41.82 E-value=39 Score=29.67 Aligned_cols=46 Identities=13% Similarity=0.183 Sum_probs=31.8
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
+..++.+.+.|.+..+..+.- .+++.+.|+|-||-++=+....+.+
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhh
Confidence 445777777787777766543 4689999999999665544444443
No 183
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=40.97 E-value=43 Score=32.42 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC--CCceeeeeEeEecCCcCCC
Q 018190 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS--KGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 39 d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~--~~~~inLkGi~IGng~~~p 104 (359)
+++.-|+...+.-=+..++++.|.|+|.|| .++.+.++..... ..-.|. +=|.||-|+...
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGg----l~~~~fl~~~~~~~W~~~~i~-~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGG----LVARYFLQWMPQEEWKDKYIK-RFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCc----hHHHHHHHhccchhhHHhhhh-EEEEeCCCCCCC
Confidence 455556666654223347899999999999 4454544443211 011233 556777777654
No 184
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=40.77 E-value=77 Score=28.68 Aligned_cols=60 Identities=20% Similarity=0.398 Sum_probs=43.2
Q ss_pred hHhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 34 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.+.++++..|++.++.. |. -....+-|- |||---|.-+..+... .++.|+.||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 35678889999999863 32 112223232 9999999999888753 3689999999998764
No 185
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=39.96 E-value=37 Score=29.70 Aligned_cols=48 Identities=23% Similarity=0.436 Sum_probs=26.8
Q ss_pred CccEEEEecCCCcccCchhHHH-HHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCC
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRT-LIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV 328 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~-~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmv 328 (359)
.-+||+.+|..|.+-|..-... .+++|+.. ++. -+ ++.+...+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~-~~~---------------------~~-~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAA-GFP---------------------HN-VEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCT-T---------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHh-CCC---------------------Cc-ceEEEcCCCCcee
Confidence 6899999999999988766544 33444311 111 12 7778889999996
No 186
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=39.91 E-value=99 Score=28.52 Aligned_cols=66 Identities=24% Similarity=0.171 Sum_probs=42.3
Q ss_pred hHhHHHHHHHHHHHHHHCC--CC-CCCceEEEcccccceehHHHHHHHHhhhcCCCCceee--eeEeEecCCcCCC
Q 018190 34 ASTARDMHVFMMNWYEKFP--EF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFN--IKGVAIGNPLLRL 104 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP--~~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in--LkGi~IGng~~~p 104 (359)
...|..+++.++.-.+..+ .+ .+.++.|+|.|=||+= -..|.++.. .- .+.++ |.|.+.|.+..|.
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~A-a~~AA~l~~-~Y---ApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQA-ALWAAELAP-SY---APELNRDLVGAAAGGPPADL 115 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHH-HHHHHHHhH-Hh---CcccccceeEEeccCCccCH
Confidence 3456666666665554444 23 4678999999999953 234444432 22 23688 9999999987764
No 187
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=39.89 E-value=62 Score=32.19 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=37.8
Q ss_pred CCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhh
Q 018190 31 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (359)
Q Consensus 31 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~ 81 (359)
.+..++-.|+..|++.--.+|+.-.+.++..+|-||.| .||..+-+.
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsG----sLsAW~R~~ 192 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSG----SLSAWFREK 192 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchh----HHHHHHHHh
Confidence 35667788888998888888876555699999999999 888877654
No 188
>PTZ00333 triosephosphate isomerase; Provisional
Probab=39.75 E-value=65 Score=29.23 Aligned_cols=61 Identities=18% Similarity=0.372 Sum_probs=43.5
Q ss_pred chHhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 33 DASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 33 ~~~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
+.+.++++..++++++.. |-.-.....-|. |||.--|.-+..|+.. .++.|++||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 345688999999998863 322212222222 9999999999988763 368999999998874
No 189
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=39.72 E-value=85 Score=27.87 Aligned_cols=60 Identities=28% Similarity=0.496 Sum_probs=44.4
Q ss_pred ccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChH---H
Q 018190 259 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS---R 335 (359)
Q Consensus 259 irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~---~ 335 (359)
.++|+.+|..|.++|....+....... . .. .....+.+++|....+.+. .
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~--------~------------------~~-~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR--------E------------------RP-KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc--------c------------------CC-ceEEEecCCccccccCccHHHHH
Confidence 899999999999999888777765321 0 02 5677788999999986665 5
Q ss_pred HHHHHHHHhc
Q 018190 336 ALHLFSSFVH 345 (359)
Q Consensus 336 a~~mi~~fl~ 345 (359)
++.-+.+|+.
T Consensus 286 ~~~~~~~f~~ 295 (299)
T COG1073 286 ALDKLAEFLE 295 (299)
T ss_pred HHHHHHHHHH
Confidence 6666666664
No 190
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=39.17 E-value=2e+02 Score=26.80 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=31.0
Q ss_pred HHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 42 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 42 ~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
+.+.....+| ......+||+|-|-|| .+|.+++-.-. --+-+|++..|..
T Consensus 130 ~lva~l~~~~-gidp~RVyvtGlS~GG----~Ma~~lac~~p------~~faa~A~VAg~~ 179 (312)
T COG3509 130 ALVAKLVNEY-GIDPARVYVTGLSNGG----RMANRLACEYP------DIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHhc-CcCcceEEEEeeCcHH----HHHHHHHhcCc------ccccceeeeeccc
Confidence 3333334444 3456689999999999 55555543321 1367777777776
No 191
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=38.69 E-value=1.8e+02 Score=29.56 Aligned_cols=49 Identities=14% Similarity=0.295 Sum_probs=36.8
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 335 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~ 335 (359)
.++||+..|..|.++|+..++.+.+.+ . + -...++.++||+++..+|..
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i----~------------------------~-~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALL----G------------------------G-PKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHC----C------------------------C-CEEEEECCCCCchHhhCCCC
Confidence 589999999999999999888766532 1 0 12245678999988777754
No 192
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=38.54 E-value=50 Score=29.62 Aligned_cols=25 Identities=12% Similarity=0.113 Sum_probs=20.9
Q ss_pred CccEEEEecCCCcccCchhHHHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIR 282 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~ 282 (359)
.++|+...-..|.-||....+.+++
T Consensus 216 rtPi~~~~~~DD~w~P~As~d~f~~ 240 (281)
T COG4757 216 RTPITFSRALDDPWAPPASRDAFAS 240 (281)
T ss_pred cCceeeeccCCCCcCCHHHHHHHHH
Confidence 5788888888899999888887776
No 193
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=38.02 E-value=21 Score=30.03 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=21.6
Q ss_pred CCCCCceEEEcccccceehHHHHHHHH
Q 018190 53 EFKSRELFLTGESYAGHYIPQLADVLL 79 (359)
Q Consensus 53 ~~~~~~~yi~GESYgG~yvP~la~~i~ 79 (359)
.+..-|+.|.|.||||+...++|..+.
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~ 111 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQ 111 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhc
Confidence 344558999999999998888887664
No 194
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=36.06 E-value=44 Score=29.03 Aligned_cols=60 Identities=25% Similarity=0.324 Sum_probs=38.1
Q ss_pred HHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCCh
Q 018190 254 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 333 (359)
Q Consensus 254 LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP 333 (359)
|..--..+||.+|+.|-++.. ...++|+... . ++.+++.+|.|+-.-.-.
T Consensus 145 l~P~P~~~lvi~g~~Ddvv~l------~~~l~~~~~~-----------------------~-~~~i~i~~a~HFF~gKl~ 194 (210)
T COG2945 145 LAPCPSPGLVIQGDADDVVDL------VAVLKWQESI-----------------------K-ITVITIPGADHFFHGKLI 194 (210)
T ss_pred ccCCCCCceeEecChhhhhcH------HHHHHhhcCC-----------------------C-CceEEecCCCceecccHH
Confidence 334467899999999955444 4444333221 1 788999999999876555
Q ss_pred HHHHHHHHHHh
Q 018190 334 SRALHLFSSFV 344 (359)
Q Consensus 334 ~~a~~mi~~fl 344 (359)
..+- .+..|+
T Consensus 195 ~l~~-~i~~~l 204 (210)
T COG2945 195 ELRD-TIADFL 204 (210)
T ss_pred HHHH-HHHHHh
Confidence 4443 344455
No 195
>COG0400 Predicted esterase [General function prediction only]
Probab=35.28 E-value=1.1e+02 Score=26.92 Aligned_cols=61 Identities=18% Similarity=0.170 Sum_probs=44.4
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCC
Q 018190 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 106 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~ 106 (359)
..++.+.+||....+.+ +...+++++.|-|-|+ .+|..+.-... -.++|+++-.|..-+..
T Consensus 78 ~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA----~ial~~~l~~~------~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 78 LETEKLAEFLEELAEEY-GIDSSRIILIGFSQGA----NIALSLGLTLP------GLFAGAILFSGMLPLEP 138 (207)
T ss_pred HHHHHHHHHHHHHHHHh-CCChhheEEEecChHH----HHHHHHHHhCc------hhhccchhcCCcCCCCC
Confidence 34556778888888876 4556789999999999 66666655442 36888888888876543
No 196
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=35.10 E-value=74 Score=28.15 Aligned_cols=28 Identities=29% Similarity=0.461 Sum_probs=24.0
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELA 285 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~ 285 (359)
+++++|++|+.|..|+....+..+++..
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 4578899999999999999888887654
No 197
>PLN02872 triacylglycerol lipase
Probab=34.77 E-value=68 Score=31.13 Aligned_cols=57 Identities=19% Similarity=0.370 Sum_probs=36.1
Q ss_pred ceEEEeCCCCcccccccCC-----CCC-CCCchHhH-HHHHHHHHHHHHHCCCCCCCceEEEcccccce
Q 018190 8 NLLFVESPAGVGWSYSNTT-----SDY-NCGDASTA-RDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 69 (359)
Q Consensus 8 nvlfiDqPvG~GFSy~~~~-----~~~-~~~~~~~a-~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~ 69 (359)
.|.-.|.. |.|+|++... ..+ ..+-++.| .|+-++++...+.- ..++++.|.|.||.
T Consensus 109 dV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~ 172 (395)
T PLN02872 109 DVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTI 172 (395)
T ss_pred Cccccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHH
Confidence 45556766 8888865322 111 12334556 67777777666432 35899999999994
No 198
>PLN02442 S-formylglutathione hydrolase
Probab=34.73 E-value=99 Score=28.24 Aligned_cols=49 Identities=10% Similarity=0.062 Sum_probs=35.6
Q ss_pred hCCccEEEEecCCCcccCch-hHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCC
Q 018190 256 QNGIPVWVFSGDQDSVVPLL-GSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 329 (359)
Q Consensus 256 ~~~irVLiy~Gd~D~~~~~~-G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP 329 (359)
..+.+|||.+|+.|.+|+.. .++.+.+.++. .+ .+ .++....|++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~-~g-----------------------~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKE-AG-----------------------AP-VTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHH-cC-----------------------CC-eEEEEeCCCCccHH
Confidence 34789999999999999974 46777765531 11 12 77888899999755
No 199
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=34.12 E-value=60 Score=28.09 Aligned_cols=45 Identities=18% Similarity=0.437 Sum_probs=27.2
Q ss_pred ccceEEEeCCCCcccccccCCCC-----C--CCCchHhHHHHHHHHHHHHHH
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSD-----Y--NCGDASTARDMHVFMMNWYEK 50 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~-----~--~~~~~~~a~d~~~fL~~F~~~ 50 (359)
+-+.|++|||..|=|.-.+.... . ...|..+.+.++.+|-.|.+.
T Consensus 100 VP~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~ 151 (193)
T PF12532_consen 100 VPSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKE 151 (193)
T ss_pred CCCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHH
Confidence 45799999999998886111111 1 112333445567777777764
No 200
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=34.06 E-value=1e+02 Score=27.41 Aligned_cols=57 Identities=23% Similarity=0.378 Sum_probs=39.5
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChH--H
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS--R 335 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~--~ 335 (359)
.++-|-+-|+.|.+++..-++.+++.. . + = -+..+-.||+||.-.|. .
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~------~----------------------~-a-~vl~HpggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESF------K----------------------D-A-TVLEHPGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhc------C----------------------C-C-eEEecCCCccCCCchHHHHH
Confidence 578899999999999999888877632 1 1 1 25567899999976642 2
Q ss_pred HHHHHHHHh
Q 018190 336 ALHLFSSFV 344 (359)
Q Consensus 336 a~~mi~~fl 344 (359)
....|+.++
T Consensus 213 i~~fi~~~~ 221 (230)
T KOG2551|consen 213 IADFIQSFL 221 (230)
T ss_pred HHHHHHHHH
Confidence 344444443
No 201
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=33.62 E-value=76 Score=28.52 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=45.6
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCCCCCChHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 337 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 337 (359)
..+|.++.|+.|.+|...-...|-+..+ +. ++ ..+...|||-+..|.+...
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~---------------------------~~-f~-l~~fdGgHFfl~~~~~~v~ 226 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK---------------------------GD-FT-LRVFDGGHFFLNQQREEVL 226 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc---------------------------CC-ce-EEEecCcceehhhhHHHHH
Confidence 5899999999999998877776665210 11 44 3455789999999999999
Q ss_pred HHHHHHhc
Q 018190 338 HLFSSFVH 345 (359)
Q Consensus 338 ~mi~~fl~ 345 (359)
..|.+.+.
T Consensus 227 ~~i~~~l~ 234 (244)
T COG3208 227 ARLEQHLA 234 (244)
T ss_pred HHHHHHhh
Confidence 99988874
No 202
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=33.61 E-value=31 Score=30.56 Aligned_cols=37 Identities=19% Similarity=-0.028 Sum_probs=29.0
Q ss_pred eEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 59 LFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 59 ~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
..|+|.|.|| ..|..+.-+.- =-+.+++.-+|.+++.
T Consensus 117 ~~i~G~S~GG----~~Al~~~l~~P------d~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 117 RAIAGHSMGG----YGALYLALRHP------DLFGAVIAFSGALDPS 153 (251)
T ss_dssp EEEEEETHHH----HHHHHHHHHST------TTESEEEEESEESETT
T ss_pred eEEeccCCCc----HHHHHHHHhCc------cccccccccCcccccc
Confidence 8999999999 77776655542 2578999999988876
No 203
>KOG2682 consensus NAD-dependent histone deacetylases and class I sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription]
Probab=33.57 E-value=25 Score=31.31 Aligned_cols=59 Identities=27% Similarity=0.527 Sum_probs=38.5
Q ss_pred CCcccccccCCCCCCCCchHhHHHHHH-------------HHHHHHHHCCCCCCCceE-EEcccccceehHHHHHHHHhh
Q 018190 16 AGVGWSYSNTTSDYNCGDASTARDMHV-------------FMMNWYEKFPEFKSRELF-LTGESYAGHYIPQLADVLLDH 81 (359)
Q Consensus 16 vG~GFSy~~~~~~~~~~~~~~a~d~~~-------------fL~~F~~~fP~~~~~~~y-i~GESYgG~yvP~la~~i~~~ 81 (359)
||.|-|.+..-.++..- ..-+|. |=..||++.|+ ||| ++-|=|-|+|=|.+.+++++-
T Consensus 43 VGAGISTsaGIPDFRSP----~tGlY~NLqr~~LPYpEAiFel~yF~~nP~----PF~tLAkELyPgnfkPt~~HYflrL 114 (314)
T KOG2682|consen 43 VGAGISTSAGIPDFRSP----GTGLYDNLQRYHLPYPEAIFELSYFKKNPE----PFFTLAKELYPGNFKPTITHYFLRL 114 (314)
T ss_pred ecCccccccCCCCCCCC----CchhhhhHHHhcCCChhhhhccHHhhcCCc----hHHHHHHHhCCCCcCchhHHHHHHH
Confidence 69999986554444211 122333 33455666553 655 788999999999999998864
Q ss_pred h
Q 018190 82 N 82 (359)
Q Consensus 82 n 82 (359)
-
T Consensus 115 l 115 (314)
T KOG2682|consen 115 L 115 (314)
T ss_pred H
Confidence 3
No 204
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=33.39 E-value=84 Score=30.70 Aligned_cols=36 Identities=17% Similarity=0.044 Sum_probs=25.1
Q ss_pred CceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 57 RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 57 ~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
....|+|.|+|| ..|.++.-++. -.+.+++.-+|-+
T Consensus 288 ~~~~IaG~S~GG----l~AL~~al~~P------d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGG----LAALYAGLHWP------ERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHH----HHHHHHHHhCc------ccccEEEEeccce
Confidence 458999999999 77777654442 2466777777654
No 205
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=32.76 E-value=49 Score=29.30 Aligned_cols=49 Identities=18% Similarity=0.235 Sum_probs=31.4
Q ss_pred HHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 44 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 44 L~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
|.+.+......-.+.+|++|.|=|| +++..|.-... --+.++++..|..
T Consensus 84 lv~~v~~~~~iD~~RVyv~G~S~Gg----~ma~~la~~~p------d~faa~a~~sG~~ 132 (220)
T PF10503_consen 84 LVDYVAARYNIDPSRVYVTGLSNGG----MMANVLACAYP------DLFAAVAVVSGVP 132 (220)
T ss_pred HHHhHhhhcccCCCceeeEEECHHH----HHHHHHHHhCC------ccceEEEeecccc
Confidence 3333333335667889999999999 56655554331 2467788777664
No 206
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=32.06 E-value=1.3e+02 Score=27.49 Aligned_cols=66 Identities=21% Similarity=0.282 Sum_probs=37.7
Q ss_pred CchHhHHHHHHHHHHHHH-HCCCC---CCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 32 GDASTARDMHVFMMNWYE-KFPEF---KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 32 ~~~~~a~d~~~fL~~F~~-~fP~~---~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
.+.+.+..+..||.+=++ ..|.. --..+.|+|+|=||+ +|-.+..++.+. ...+++++++.-+|.=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk----~Af~~al~~~~~-~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGK----VAFAMALGNASS-SLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCH----HHHHHHhhhccc-ccccceeEEEEecccc
Confidence 344556666666554222 22211 123599999999997 333333333221 1246899999988875
No 207
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=31.61 E-value=1.4e+02 Score=33.66 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=45.1
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCC
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 85 (359)
...++-+|.| |.|-+ .. ...+-++.|+++...++.. .| ..+++|.|.|+||.-+-.+|..+.++.
T Consensus 1094 ~~~v~~~~~~-g~~~~--~~---~~~~l~~la~~~~~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~--- 1158 (1296)
T PRK10252 1094 QWSIYGIQSP-RPDGP--MQ---TATSLDEVCEAHLATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRARG--- 1158 (1296)
T ss_pred CCcEEEEECC-CCCCC--CC---CCCCHHHHHHHHHHHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHcC---
Confidence 4567788887 55533 11 1235556677766666542 22 358999999999965555555443321
Q ss_pred CCceeeeeEeEecCCc
Q 018190 86 KGFKFNIKGVAIGNPL 101 (359)
Q Consensus 86 ~~~~inLkGi~IGng~ 101 (359)
..+..+++-+++
T Consensus 1159 ----~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1159 ----EEVAFLGLLDTW 1170 (1296)
T ss_pred ----CceeEEEEecCC
Confidence 245555555543
No 208
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=31.40 E-value=98 Score=31.75 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=28.5
Q ss_pred HHHHhCCccEEEEecCCCcccCchhHHHHHHHH
Q 018190 252 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIREL 284 (359)
Q Consensus 252 ~~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l 284 (359)
+.||+-+.+||+..|..|..|.-.--|..-++|
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKM 330 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKM 330 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHh
Confidence 578888999999999999999988877776655
No 209
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=30.88 E-value=18 Score=22.88 Aligned_cols=17 Identities=29% Similarity=0.272 Sum_probs=14.3
Q ss_pred hhHhhcCchHHHHhhCC
Q 018190 204 ERFFYLNLPEVQKALHA 220 (359)
Q Consensus 204 ~~~~ylN~~~V~~aL~v 220 (359)
.+..-|++|+||++|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 46677999999999975
No 210
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=30.81 E-value=93 Score=32.33 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=44.1
Q ss_pred hHhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 34 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.+.|+++..|+++++.. |-+-....+=|- |||.--|.-+..|+... ++.|+.||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 45688999999999863 321111122222 99999999999998643 689999999888764
No 211
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.77 E-value=69 Score=33.84 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=25.6
Q ss_pred HHHHHHHHH---HHHHHCCCCC---CCceEEEcccccceehHHHHHHHHh
Q 018190 37 ARDMHVFMM---NWYEKFPEFK---SRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 37 a~d~~~fL~---~F~~~fP~~~---~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
++-+.++++ ..++.-+||. ..++.|.|+|+|| .+|+..+.
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGG----iVAra~~t 201 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGG----IVARATLT 201 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchh----HHHHHHHh
Confidence 444444444 4455556666 5679999999999 55555443
No 212
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=30.71 E-value=97 Score=27.87 Aligned_cols=27 Identities=19% Similarity=0.091 Sum_probs=20.1
Q ss_pred CCCCCceEEEcccccceehHHHHHHHHhhhc
Q 018190 53 EFKSRELFLTGESYAGHYIPQLADVLLDHNA 83 (359)
Q Consensus 53 ~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 83 (359)
-+..+||-++|+|+|| .+|-++..+-.
T Consensus 70 ~~~d~P~alfGHSmGa----~lAfEvArrl~ 96 (244)
T COG3208 70 PLLDAPFALFGHSMGA----MLAFEVARRLE 96 (244)
T ss_pred ccCCCCeeecccchhH----HHHHHHHHHHH
Confidence 3668899999999999 56665554443
No 213
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=30.02 E-value=40 Score=22.44 Aligned_cols=20 Identities=30% Similarity=0.813 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHHH-HCCCCC
Q 018190 36 TARDMHVFMMNWYE-KFPEFK 55 (359)
Q Consensus 36 ~a~d~~~fL~~F~~-~fP~~~ 55 (359)
....+..+++.||. +|||+.
T Consensus 15 ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 15 EINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHccchhHH
Confidence 34567789999997 599974
No 214
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=29.90 E-value=2.5e+02 Score=24.08 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=37.4
Q ss_pred HHHhCCccEEEEecCCCcccCchhHHHHHHHHHHhcCCCcccccccceeCCeeeEEEEEeCCeeEEEEEcCCCCCC----
Q 018190 253 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV---- 328 (359)
Q Consensus 253 ~LL~~~irVLiy~Gd~D~~~~~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmv---- 328 (359)
..-+-..+||+..|..|..++....+.+.+.|+.. + .. +.+.+..|++|==
T Consensus 140 ~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~-~-----------------------~~-~~~~~y~ga~HgF~~~~ 194 (218)
T PF01738_consen 140 DAPKIKAPVLILFGENDPFFPPEEVEALEEALKAA-G-----------------------VD-VEVHVYPGAGHGFANPS 194 (218)
T ss_dssp HGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCT-T-----------------------TT-EEEEEETT--TTTTSTT
T ss_pred hhcccCCCEeecCccCCCCCChHHHHHHHHHHHhc-C-----------------------Cc-EEEEECCCCcccccCCC
Confidence 33344789999999999999999988888877311 1 11 6677777898852
Q ss_pred -CCCChHHHHHHHHHH
Q 018190 329 -PYAQPSRALHLFSSF 343 (359)
Q Consensus 329 -P~dqP~~a~~mi~~f 343 (359)
+.++++++.+..++.
T Consensus 195 ~~~~~~~aa~~a~~~~ 210 (218)
T PF01738_consen 195 RPPYDPAAAEDAWQRT 210 (218)
T ss_dssp STT--HHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHH
Confidence 234555665544443
No 215
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=29.78 E-value=49 Score=22.46 Aligned_cols=23 Identities=26% Similarity=0.534 Sum_probs=19.5
Q ss_pred hHhHHHHHHHHHHHHHHCCCCCC
Q 018190 34 ASTARDMHVFMMNWYEKFPEFKS 56 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~~fP~~~~ 56 (359)
.+.-+++++.|+.|++.||++-.
T Consensus 4 aeiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 4 AEIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred ccccHHHHHHHHHHHHcCCCchH
Confidence 35678999999999999999854
No 216
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=29.76 E-value=73 Score=29.83 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=26.6
Q ss_pred CCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccc
Q 018190 31 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 68 (359)
Q Consensus 31 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG 68 (359)
.+-+..|+|+..|+..+-. .++..+..|.|+|-||
T Consensus 100 h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 100 HNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred cCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 5666778887777766543 2567799999999999
No 217
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=29.13 E-value=56 Score=28.24 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 37 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 37 a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
..++..++....+.++ ....+++|+|.|.|| .+|..+.-... -.+.++++..|..
T Consensus 76 ~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg----~~a~~~a~~~p------~~~~~~~~~~g~~ 130 (212)
T TIGR01840 76 VESLHQLIDAVKANYS-IDPNRVYVTGLSAGG----GMTAVLGCTYP------DVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHHhcC-cChhheEEEEECHHH----HHHHHHHHhCc------hhheEEEeecCCc
Confidence 3444455555555543 445689999999999 56666554432 1356766666543
No 218
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=28.10 E-value=1.5e+02 Score=27.66 Aligned_cols=71 Identities=11% Similarity=0.140 Sum_probs=40.9
Q ss_pred CchHhHHHHHHHHHHHHHHCCC-CCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCCCC
Q 018190 32 GDASTARDMHVFMMNWYEKFPE-FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQD 107 (359)
Q Consensus 32 ~~~~~a~d~~~fL~~F~~~fP~-~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~~~ 107 (359)
+-++.++|+-..++-+-..... +...++.|.|+|=|.. -+.+++...+... ....++|+++=.|+-|....
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQ---dvl~Yl~~~~~~~--~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQ---DVLHYLSSPNPSP--SRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHH---HHHHHHHH-TT-----CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcH---HHHHHHhccCccc--cccceEEEEEeCCCCChhHh
Confidence 4456678877777666655433 4567899999999996 4444555444311 13579999999998887654
No 219
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=27.51 E-value=1.8e+02 Score=31.03 Aligned_cols=28 Identities=21% Similarity=0.039 Sum_probs=25.0
Q ss_pred CccEEEEecCCCcccCchhHHHHHHHHH
Q 018190 258 GIPVWVFSGDQDSVVPLLGSRTLIRELA 285 (359)
Q Consensus 258 ~irVLiy~Gd~D~~~~~~G~~~~i~~l~ 285 (359)
.++||+.+|-.|..++..++..+.+.|.
T Consensus 455 kvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 455 KASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 6899999999999999999888888764
No 220
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=27.22 E-value=76 Score=29.29 Aligned_cols=50 Identities=24% Similarity=0.577 Sum_probs=35.1
Q ss_pred cccccceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHHCCCCCCCceEEEcccccce
Q 018190 3 WNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 69 (359)
Q Consensus 3 W~~~anvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~ 69 (359)
.++.+-||-||-|+|+|-|- .|+.+-+-| =|..||+++--.+|+ .|||+-
T Consensus 67 f~enSkvI~VeGnI~sGK~k-------------lAKelAe~L--gf~hfP~~~~d~iyv--dsyg~D 116 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK-------------LAKELAEQL--GFVHFPEFRMDDIYV--DSYGND 116 (393)
T ss_pred hcccceEEEEeCCcccCchh-------------HHHHHHHHh--CCcccccccccceee--cccCcc
Confidence 35678899999999999662 233333211 245899998777777 789884
No 221
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=27.07 E-value=50 Score=31.92 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=28.0
Q ss_pred EEEEcCCCCCCCCCChHHHHHHHHHHhcCCCC
Q 018190 318 FVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 349 (359)
Q Consensus 318 f~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 349 (359)
.+.|.|.||+ |.||=++--++.++.-.|.||
T Consensus 258 QvMVEGPGHv-Pl~~I~~nv~lqK~lc~~APf 288 (423)
T TIGR00190 258 QCMVEGPGHV-PLDQIEANVRLQKELCDEAPF 288 (423)
T ss_pred eEEEECCCCC-cHHHHHHHHHHHHHhhCCCCe
Confidence 4889999998 999999999999998888875
No 222
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=26.91 E-value=29 Score=32.02 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=28.3
Q ss_pred eEEEEEcCCCCCCCCCChHHHHHHHHHHhcCCCC
Q 018190 316 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 349 (359)
Q Consensus 316 Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 349 (359)
=|++.|.++|=||-.+||....+-|+-|++|.-+
T Consensus 248 ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~ 281 (283)
T PF03096_consen 248 TTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGY 281 (283)
T ss_dssp EEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB
T ss_pred ceEEEecccCCcccccCcHHHHHHHHHHHccCCc
Confidence 7899999999999999999999999999988643
No 223
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=26.05 E-value=1.1e+02 Score=25.75 Aligned_cols=51 Identities=10% Similarity=0.134 Sum_probs=30.6
Q ss_pred HHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCC
Q 018190 43 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 43 fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~ 103 (359)
+++.+-+..... ..+.+|.|+|.|+. .+++++..+. ..+++|+++..|+-.
T Consensus 42 W~~~l~~~i~~~-~~~~ilVaHSLGc~---~~l~~l~~~~------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 42 WVQALDQAIDAI-DEPTILVAHSLGCL---TALRWLAEQS------QKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHCCHC--TTTEEEEEETHHHH---HHHHHHHHTC------CSSEEEEEEES--SC
T ss_pred HHHHHHHHHhhc-CCCeEEEEeCHHHH---HHHHHHhhcc------cccccEEEEEcCCCc
Confidence 444444444443 56799999999994 3333332221 358999999999943
No 224
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=24.70 E-value=1.6e+02 Score=25.82 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=37.1
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCC
Q 018190 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 104 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p 104 (359)
+.++++..|++ +-+ +... .+-|- |||---|.-+..+..+ .++.|+.||.+.+++
T Consensus 151 ~~~~~v~~~ir-~~~---~~~~-~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~Asl~a 204 (205)
T TIGR00419 151 AQPEVVHGSVR-AVK---EVNE-SVRVL---CGAGISTGEDAELAAQ--------LGAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHH-hhh---hhcC-CceEE---EeCCCCHHHHHHHhcC--------CCCCEEEEeeeeecC
Confidence 45777888887 221 1111 22222 9999999998888764 368999999998876
No 225
>PRK15492 triosephosphate isomerase; Provisional
Probab=24.38 E-value=1.7e+02 Score=26.67 Aligned_cols=60 Identities=22% Similarity=0.319 Sum_probs=43.5
Q ss_pred hHhHHHHHHHHHHHHH-HCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcCCCC
Q 018190 34 ASTARDMHVFMMNWYE-KFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 105 (359)
Q Consensus 34 ~~~a~d~~~fL~~F~~-~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~~p~ 105 (359)
.+.+++...++++++. .+-+- ...+-|. |||---|.-+..|+... ++.|+.||..-++|.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~--------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP--------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC--------CCCEEEeehhhcCHH
Confidence 3456888899999865 34221 2233333 99999999999998643 689999999888864
No 226
>PF03283 PAE: Pectinacetylesterase
Probab=24.36 E-value=2.9e+02 Score=26.50 Aligned_cols=90 Identities=20% Similarity=0.210 Sum_probs=49.7
Q ss_pred ccceEEEeCCCCcccccccCCCCCCCCch----HhHHHHHHHHHHHHHH-CCCCCCCceEEEcccccceehHHHHHHHHh
Q 018190 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDA----STARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (359)
Q Consensus 6 ~anvlfiDqPvG~GFSy~~~~~~~~~~~~----~~a~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~la~~i~~ 80 (359)
..|++||=-=.|.-|+= +......... .-...+...|...... +++ ...+.|+|.|=||.-+..-+.+|.+
T Consensus 104 ~wN~V~vpYC~Gd~~~G--~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~ 179 (361)
T PF03283_consen 104 NWNHVFVPYCDGDSHSG--DVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRD 179 (361)
T ss_pred cccEEEEEecCCccccC--cccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHH
Confidence 36888886655554443 2111101110 1133344455555555 554 3579999999999877777777766
Q ss_pred hhcCCCCceeeeeEeEecCCcCC
Q 018190 81 HNAHSKGFKFNIKGVAIGNPLLR 103 (359)
Q Consensus 81 ~n~~~~~~~inLkGi~IGng~~~ 103 (359)
.-.. ...++++.=..-++|
T Consensus 180 ~lp~----~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 180 RLPS----SVKVKCLSDSGFFLD 198 (361)
T ss_pred Hhcc----CceEEEecccccccc
Confidence 5432 245565555544444
No 227
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=24.24 E-value=47 Score=30.93 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHH
Q 018190 37 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 74 (359)
Q Consensus 37 a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~l 74 (359)
-+++.++|+.+-+.+|++. .++..|.||-|+-++.+
T Consensus 9 ~~ei~~~l~~la~~~p~~v--~~~~IG~S~eGR~i~~l 44 (300)
T cd03871 9 WETIEAWTEQVASENPDLI--SRSQIGTTFEGRPIYLL 44 (300)
T ss_pred HHHHHHHHHHHHHHCCCce--EEEEeeeCCCCCeeEEE
Confidence 5778899999999999875 57788999999766543
No 228
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=23.73 E-value=80 Score=31.32 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEccccccee
Q 018190 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHY 70 (359)
Q Consensus 38 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~y 70 (359)
...++++++-...|. -..+++.|+|+|.||+-
T Consensus 158 ~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~ 189 (493)
T cd00312 158 RLALKWVQDNIAAFG-GDPDSVTIFGESAGGAS 189 (493)
T ss_pred HHHHHHHHHHHHHhC-CCcceEEEEeecHHHHH
Confidence 344567777777774 35568999999999953
No 229
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=23.48 E-value=51 Score=31.00 Aligned_cols=46 Identities=26% Similarity=0.426 Sum_probs=32.1
Q ss_pred HHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeeeeEeEecCCcC
Q 018190 46 NWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 102 (359)
Q Consensus 46 ~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~IGng~~ 102 (359)
.|+...|+.-.+.+.++|+|-|| .+|....--.. .+++++...|++
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG----~lal~~aaLd~-------rv~~~~~~vP~l 209 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGG----GLALAAAALDP-------RVKAAAADVPFL 209 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHH----HHHHHHHHHSS-------T-SEEEEESESS
T ss_pred HHHHhCCCcCcceEEEEeecCch----HHHHHHHHhCc-------cccEEEecCCCc
Confidence 56678899988999999999999 44444332221 367777777665
No 230
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=23.43 E-value=52 Score=24.15 Aligned_cols=12 Identities=33% Similarity=0.888 Sum_probs=7.6
Q ss_pred ceEEEeCCCCcc
Q 018190 8 NLLFVESPAGVG 19 (359)
Q Consensus 8 nvlfiDqPvG~G 19 (359)
+.|.||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 467888888887
No 231
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=22.37 E-value=1.6e+02 Score=27.48 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=32.3
Q ss_pred eEEEEEcCCCCCCCCCChHHHHHHHHHHhcCCCCCC
Q 018190 316 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLPN 351 (359)
Q Consensus 316 Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~~ 351 (359)
=|++.|.++|-++..+||....+-|+-|+.|.-+-.
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~ 310 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLP 310 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccCCccc
Confidence 678999999999999999999999999999987643
No 232
>KOG3505 consensus Mitochondrial/chloroplast ribosomal protein L33-like [Translation, ribosomal structure and biogenesis]
Probab=22.36 E-value=31 Score=22.76 Aligned_cols=13 Identities=38% Similarity=0.708 Sum_probs=10.0
Q ss_pred CCCCcccccccCC
Q 018190 14 SPAGVGWSYSNTT 26 (359)
Q Consensus 14 qPvG~GFSy~~~~ 26 (359)
+-+||||+|....
T Consensus 15 StAgtGf~~~~s~ 27 (55)
T KOG3505|consen 15 STAGTGFFYVKSR 27 (55)
T ss_pred HhcccceEEEEec
Confidence 4579999997654
No 233
>PRK10115 protease 2; Provisional
Probab=22.31 E-value=1.9e+02 Score=30.41 Aligned_cols=28 Identities=25% Similarity=0.340 Sum_probs=25.1
Q ss_pred Ccc-EEEEecCCCcccCchhHHHHHHHHH
Q 018190 258 GIP-VWVFSGDQDSVVPLLGSRTLIRELA 285 (359)
Q Consensus 258 ~ir-VLiy~Gd~D~~~~~~G~~~~i~~l~ 285 (359)
.++ +||.+|..|..|++...+.|+..|.
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr 633 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLR 633 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHH
Confidence 578 6788999999999999999999884
No 234
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.13 E-value=1.8e+02 Score=27.90 Aligned_cols=87 Identities=16% Similarity=0.129 Sum_probs=48.3
Q ss_pred CCcccccccCCCCCC-CCchHhHHHHHHHHHHHHHHCCC-CCCCceEEEcccccceehHHHHHHHHhhhcC-CCC-ceee
Q 018190 16 AGVGWSYSNTTSDYN-CGDASTARDMHVFMMNWYEKFPE-FKSRELFLTGESYAGHYIPQLADVLLDHNAH-SKG-FKFN 91 (359)
Q Consensus 16 vG~GFSy~~~~~~~~-~~~~~~a~d~~~fL~~F~~~fP~-~~~~~~yi~GESYgG~yvP~la~~i~~~n~~-~~~-~~in 91 (359)
+-++||.....+-+. .-|.+.++.-...|..++...-+ -.-.++||.++|-|. .+..+.+++-.. ... ....
T Consensus 148 ~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGt----wl~~e~LrQLai~~~~~l~~k 223 (377)
T COG4782 148 VPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGT----WLLMEALRQLAIRADRPLPAK 223 (377)
T ss_pred ceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchH----HHHHHHHHHHhccCCcchhhh
Confidence 346777755543221 22444445444455555542111 114579999999998 555555544321 112 3456
Q ss_pred eeEeEecCCcCCCCC
Q 018190 92 IKGVAIGNPLLRLDQ 106 (359)
Q Consensus 92 LkGi~IGng~~~p~~ 106 (359)
++=+++-.|-+|-+.
T Consensus 224 i~nViLAaPDiD~DV 238 (377)
T COG4782 224 IKNVILAAPDIDVDV 238 (377)
T ss_pred hhheEeeCCCCChhh
Confidence 788888888777543
No 235
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=22.02 E-value=1.1e+02 Score=26.34 Aligned_cols=40 Identities=23% Similarity=0.576 Sum_probs=23.1
Q ss_pred ceEEEeCCCCcccccccCCCCCCCCchHhHHHHHHHHHHHHHH
Q 018190 8 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK 50 (359)
Q Consensus 8 nvlfiDqPvG~GFSy~~~~~~~~~~~~~~a~d~~~fL~~F~~~ 50 (359)
++++.|-|=++|..|.... ..++....++...++..++..
T Consensus 2 dliitDPPY~~~~~~~~~~---~~~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF---DYGDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhh---hccCCCCHHHHHHHHHHHHHH
Confidence 6899999999999962211 134444567777777777764
No 236
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=21.34 E-value=1.9e+02 Score=25.44 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=32.3
Q ss_pred CCchHhHHHHHHHHHHHHHHCCCCC-CCceEEEcccccceehHHHHHHHHhh
Q 018190 31 CGDASTARDMHVFMMNWYEKFPEFK-SRELFLTGESYAGHYIPQLADVLLDH 81 (359)
Q Consensus 31 ~~~~~~a~d~~~fL~~F~~~fP~~~-~~~~yi~GESYgG~yvP~la~~i~~~ 81 (359)
+++..+++-+-+.+...+..-++-. ...+.-+| ||||.|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 5777888888888888888765432 14555556 799999999988863
No 237
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=21.25 E-value=2.7e+02 Score=25.27 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=30.8
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCceEEEcccccceehHHHHHHHHhhhcCCCCceeee-eEeEecCCc
Q 018190 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI-KGVAIGNPL 101 (359)
Q Consensus 35 ~~a~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inL-kGi~IGng~ 101 (359)
+.|+-+...|+..-++ |.=+.+.+.|+|.||. .+..++.+.-... .++ .| |=|.||.|+
T Consensus 84 ~qa~wl~~vl~~L~~~---Y~~~~~N~VGHSmGg~---~~~~yl~~~~~~~-~~P-~l~K~V~Ia~pf 143 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKK---YHFKKFNLVGHSMGGL---SWTYYLENYGNDK-NLP-KLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHHHHHHHC---C--SEEEEEEETHHHH---HHHHHHHHCTTGT-TS--EEEEEEEES--T
T ss_pred HHHHHHHHHHHHHHHh---cCCCEEeEEEECccHH---HHHHHHHHhccCC-CCc-ccceEEEecccc
Confidence 3455555555555543 4456899999999994 4445554432221 111 33 456666554
Done!