BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018193
(359 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 276/347 (79%), Positives = 300/347 (86%), Gaps = 5/347 (1%)
Query: 15 APLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPV 74
APLLRPR + +ARP TLALL+GRATGR GPSMLVRETAARELEERRADWGYSKPV
Sbjct: 1956 APLLRPRQ-GTAEQSARPTTLALLMGRATGR-RGPSMLVRETAARELEERRADWGYSKPV 2013
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
VALD+MWN +FVIVS MLI T ERP+T IRLWICGYALQC VHVVLVW+EYRRRN RR
Sbjct: 2014 VALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRR 2073
Query: 135 VRDDEMGGE-DFRDVN-NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYW 192
VRD+E + D + NDSEDE+ + ++S TKRCES+NTMASFLWWIVGFYW
Sbjct: 2074 VRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYW 2133
Query: 193 VVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 252
VVSGG+ LLQ APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG
Sbjct: 2134 VVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 2193
Query: 253 QEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICL 312
QEGASEADLS+LP+YRFE NN+EK GVGAG M+P ET+ GY+ANERILLPEDAECCICL
Sbjct: 2194 QEGASEADLSMLPRYRFEA-NNEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICL 2252
Query: 313 SSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
SSYEDG ELHALPCNHHFHSTCI KWLKMNATCPLCKYNILKG+EQ+
Sbjct: 2253 SSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSEQI 2299
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 271/358 (75%), Positives = 300/358 (83%), Gaps = 18/358 (5%)
Query: 14 HAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKP 73
HAPLL PR A R A+LA+LLGR TGR GPSMLVRETAA ELEERRADWGYSKP
Sbjct: 612 HAPLLHPRQ-----EAPRAASLAMLLGRVTGR-RGPSMLVRETAALELEERRADWGYSKP 665
Query: 74 VVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR 133
VVALD++WN+AFV+VS MLI+++ E+P+T IR+WICGYALQCLVHVVLVW+EYRRRN+R
Sbjct: 666 VVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSR 725
Query: 134 RVRDDE----------MGGEDFRDVNNDSEDEEEDGI--VYRTSTRTSFTKRCESINTMA 181
RVRD+E + G+ + + + E+EDG+ TS R+S KRCES+NTMA
Sbjct: 726 RVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSNRSSVIKRCESVNTMA 785
Query: 182 SFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 241
SFLWWIVGFYWVVSGGD LLQ AP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP
Sbjct: 786 SFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 845
Query: 242 CIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERIL 301
CIIAILYAVAGQEGASEADLSILPKYRF++ +EK VGAGKMVPIET+ GY+ANERIL
Sbjct: 846 CIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLANERIL 905
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
LPEDAECCICL YEDG ELH LPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV
Sbjct: 906 LPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 963
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/352 (75%), Positives = 300/352 (85%), Gaps = 4/352 (1%)
Query: 8 AARSDSHAPLLRPR-DPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRA 66
+ ++ HAPLLRPR DP SP + R TL+ LLGRATGR GPSMLVRETAAREL+ERRA
Sbjct: 2 STENEPHAPLLRPRQDPPTSPTS-RQTTLSALLGRATGR-RGPSMLVRETAARELDERRA 59
Query: 67 DWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWME 126
DWGYSKPVV+LD+MWN+AFV+VS ML++T+ ERP+T IR+WICGYALQCLVHVVLVW+E
Sbjct: 60 DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119
Query: 127 YRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWW 186
YRRRNTRR RD E + + N DEE+D + S R+S TKRCES+NTM SFLWW
Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDEEDDRASF-ISPRSSVTKRCESVNTMVSFLWW 178
Query: 187 IVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 246
+VGFYWVVSGGD+LLQ AP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI
Sbjct: 179 MVGFYWVVSGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 238
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LYAVAGQEGASEADL LPKY+F++ N+EK G+ AGKMVP+ET+ ++ ERILLPEDA
Sbjct: 239 LYAVAGQEGASEADLIQLPKYKFQMIRNEEKPGIEAGKMVPVETSSRFLGTERILLPEDA 298
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
ECCICLS YEDG ELHALPCNHHFH+TCIVKWLKMNATCPLCK+NILKGNEQ
Sbjct: 299 ECCICLSPYEDGAELHALPCNHHFHATCIVKWLKMNATCPLCKFNILKGNEQ 350
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/336 (79%), Positives = 288/336 (85%), Gaps = 5/336 (1%)
Query: 15 APLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPV 74
APLLRPR + +ARP TLALL+GRATGR GPSMLVRETAARELEERRADWGYSKPV
Sbjct: 12 APLLRPRQ-GTAEQSARPTTLALLMGRATGR-RGPSMLVRETAARELEERRADWGYSKPV 69
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
VALD+MWN +FVIVS MLI T ERP+T IRLWICGYALQC VHVVLVW+EYRRR+ RR
Sbjct: 70 VALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRR 129
Query: 135 VRDDEMGGE-DFRDVN-NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYW 192
VRD+E + D + NDSEDE+ + ++S TKRCES+NTMASFLWWIVGFYW
Sbjct: 130 VRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYW 189
Query: 193 VVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 252
VVSGG+ LLQ APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG
Sbjct: 190 VVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 249
Query: 253 QEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICL 312
QEGASEADLS+LP+YRFE NN+EK GVGAG M P ET+ GY+ANERILLPEDAECCICL
Sbjct: 250 QEGASEADLSMLPRYRFEA-NNEEKSGVGAGTMFPTETSSGYLANERILLPEDAECCICL 308
Query: 313 SSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLC 348
SSYEDG ELHALPCNHHFHSTCI KWLKMNATCPLC
Sbjct: 309 SSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLC 344
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/362 (73%), Positives = 296/362 (81%), Gaps = 13/362 (3%)
Query: 1 MSSSSDAAARS-DSHAPLLRP-RDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAA 58
MSS + A+ + +SHAPLLRP D S +P TLALLLGRA RG PSMLVRETAA
Sbjct: 1 MSSQTAASMEAPESHAPLLRPLTDASRAPVP----TLALLLGRAGRRG--PSMLVRETAA 54
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
RELEERRADWGYSKPVVALD+ WN AFV+V+A ML T ERP+T IR+WI GYALQCLV
Sbjct: 55 RELEERRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLV 114
Query: 119 HVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRT-STRTSFTKRCESI 177
HV+LVW+EYRRR+ R D G+ RDV +D+ +ED R S+ SFTKRCE +
Sbjct: 115 HVLLVWLEYRRRSRR----DSHHGQRARDVESDAGSGDEDYSDDRDWSSGYSFTKRCELL 170
Query: 178 NTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALC 237
NT SFLWWIVGFYWVVSGG++LLQ APRLYWL VVFLAFDVFFAIFCVVLACLIGIALC
Sbjct: 171 NTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIALC 230
Query: 238 CCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN 297
CCLPCIIAILYAVAGQEGASEADLS+LPKYRF + ++++K GAG MVPIET+ Y+AN
Sbjct: 231 CCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYLAN 290
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
ER LLPEDAECCICL SYEDG ELHALPCNHHFHS+CIVKWLKMNATCPLCKYNILKGNE
Sbjct: 291 ERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNE 350
Query: 358 QV 359
QV
Sbjct: 351 QV 352
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/348 (72%), Positives = 274/348 (78%), Gaps = 22/348 (6%)
Query: 12 DSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYS 71
SHAPLL PR + AAR LALLLGR RGH S +VRETAARELEERRADW YS
Sbjct: 9 QSHAPLLLPRPDA----AARLPILALLLGR---RGH--SAVVRETAARELEERRADWTYS 59
Query: 72 KPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
KPVVALDI WN AFV+VSA ML T+ E P+T IR WICGYALQCLVHV LVW+EYRRRN
Sbjct: 60 KPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRN 119
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
++ + DVN+ ED FTKRC S+NTM S LWW+VGFY
Sbjct: 120 DAPRDEESAASLQYDDVNDSDED-------------ARFTKRCASLNTMISLLWWMVGFY 166
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
WVVSGGD+LLQ APRLYWL+VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA
Sbjct: 167 WVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 226
Query: 252 GQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCIC 311
GQEGASE+DLSILPKYRF++ +N+E G G G M+P+ET+ GY NER L PEDAECCIC
Sbjct: 227 GQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAECCIC 286
Query: 312 LSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+SSYEDG ELH LPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV
Sbjct: 287 ISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 334
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 280/356 (78%), Gaps = 14/356 (3%)
Query: 3 SSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELE 62
SS ++ + SDS PLLR R S RP +A+LLGRA+GR G SM+VRETAA+ELE
Sbjct: 2 SSPESPSGSDSSTPLLRSRQSS----PRRPPVIAVLLGRASGR-RGASMVVRETAAQELE 56
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ERRADWGYSKPVVALD++WN+AFV+V+ ML++ E+P+ IR+WICGYA+QCLVHVVL
Sbjct: 57 ERRADWGYSKPVVALDMLWNTAFVVVAIVMLLVFKEEKPNVPIRVWICGYAIQCLVHVVL 116
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
VW+E+R+RN R D + N+DSEDE+ D R TK CES+NT+ S
Sbjct: 117 VWLEFRKRNARTRTGDLEAAQG--SGNHDSEDEDND-------ERILSTKTCESMNTIIS 167
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
F+WWI GFYW+VSGGD+LLQ A LYWL +FLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 168 FIWWIAGFYWLVSGGDILLQNATHLYWLTFIFLAFDVFFAIFCVVLACLIGIALCCCLPC 227
Query: 243 IIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILL 302
IIA+LYAVAGQEGASEADLSILPKYRF+ NNDEK G GKM+P+E + ER+LL
Sbjct: 228 IIALLYAVAGQEGASEADLSILPKYRFQALNNDEKQSDGGGKMIPVEAGSENMGKERVLL 287
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
PEDA+CCICLSSYEDG EL +L CNHHFHSTCIVKWLKMNATCPLCK+NILKGNEQ
Sbjct: 288 PEDADCCICLSSYEDGAELVSLSCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQ 343
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 280/356 (78%), Gaps = 15/356 (4%)
Query: 3 SSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELE 62
SS ++ + SDS PLLR R S R +A+LL RA+GR G SM+VRETAA+ELE
Sbjct: 2 SSPESPSGSDSSTPLLRSRQSS----PRRQPVIAVLLNRASGR-RGASMVVRETAAQELE 56
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ERRADWGYSKPVVALD++WN+AFV+V+ ML++ E+P+ IR+WICGYA+QCLVHVVL
Sbjct: 57 ERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVL 116
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
VW+E+R+RN R D E + N DSEDE+ D R TK CES+NT+ S
Sbjct: 117 VWLEFRKRNARSRPGDL---EAAQATNQDSEDEDND-------ERFLSTKTCESMNTIIS 166
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
F+WWIVGFYW+VSGGD+LLQ A LYWL VFLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 167 FVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPC 226
Query: 243 IIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILL 302
IIA+LYAVAGQEGASEADLSILPKYRF NNDEK G GKM+P++ + NER+LL
Sbjct: 227 IIALLYAVAGQEGASEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLL 286
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
PEDA+CCICLSSYEDG EL +LPCNHHFHSTCIVKWLKMNATCPLCK+NILKGNEQ
Sbjct: 287 PEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQ 342
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 280/356 (78%), Gaps = 15/356 (4%)
Query: 3 SSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELE 62
SS ++ + SDS PL+R R S R +A+LL RA+GR G SM+VRETAA+ELE
Sbjct: 2 SSPESPSGSDSSTPLIRSRQSS----PRRQPVIAVLLNRASGR-RGASMVVRETAAQELE 56
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ERRADWGYSKPVVALD++WN+AFV+V+ ML++ E+P+ IR+WICGYA+QCLVHVVL
Sbjct: 57 ERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVL 116
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
VW+E+R+RN R D E + N DSEDE+ D R TK CES+NT+ S
Sbjct: 117 VWLEFRKRNARSRPGDL---EAAQATNQDSEDEDND-------ERFLSTKTCESMNTIIS 166
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
F+WWIVGFYW+VSGGD+LLQ A LYWL VFLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 167 FVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPC 226
Query: 243 IIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILL 302
IIA+LYAVAGQEGASEADLSILPKYRF NNDEK G GKM+P++ + NER+LL
Sbjct: 227 IIALLYAVAGQEGASEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLL 286
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
PEDA+CCICLSSYEDG EL +LPCNHHFHSTCIVKWLKMNATCPLCK+NILKGNEQ
Sbjct: 287 PEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQ 342
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/348 (72%), Positives = 279/348 (80%), Gaps = 12/348 (3%)
Query: 12 DSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYS 71
SHAPLL PR + AAR LALLLGR RGH S +VRETAARELEERRADW YS
Sbjct: 9 QSHAPLLLPRPDA----AARLPILALLLGR---RGH--SAVVRETAARELEERRADWTYS 59
Query: 72 KPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
KPVVALDI WN AFV+VSA ML T+ E P+T IR WICGYALQCLVHV LVW+EYRRRN
Sbjct: 60 KPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRN 119
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
DE + + + DE++ G +S+ + FTKRC S+NTM S LWW+VGFY
Sbjct: 120 D--APRDEESAASLQYDDVNDSDEDDVG-TSGSSSSSGFTKRCASLNTMISLLWWMVGFY 176
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
WVVSGGD+LLQ APRLYWL+VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA
Sbjct: 177 WVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 236
Query: 252 GQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCIC 311
GQEGASE+DLSILPKYRF++ +N+E G G G M+P+ET+ GY NER L PEDAECCIC
Sbjct: 237 GQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAECCIC 296
Query: 312 LSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+SSYEDG ELH LPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV
Sbjct: 297 ISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 344
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/363 (69%), Positives = 282/363 (77%), Gaps = 10/363 (2%)
Query: 1 MSSSSDAAARSDSHAPLLRPR-DPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAAR 59
MSS + + + PLLR R D P A LALLLGRA RG PSMLVRETAAR
Sbjct: 1 MSSQTAPTEAPEPYTPLLRSRTDAGRGPAPA----LALLLGRAGRRG--PSMLVRETAAR 54
Query: 60 ELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVH 119
ELEERRADWGYSKPVVALD+ WN AFV+VSAAML T +E P+T IR+WI GYALQCLVH
Sbjct: 55 ELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVH 114
Query: 120 VVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYR---TSTRTSFTKRCES 176
V+LVW+EYRRR+ R R D +D++ ++R+ F KRCES
Sbjct: 115 VLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCES 174
Query: 177 INTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 236
+NT SFLWWIVGFYWVVSGGD+LLQ APRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL
Sbjct: 175 LNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 234
Query: 237 CCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA 296
CCCLPCIIAILYAVAGQEGASEADLS+LPKY+F + ++ +K GAG MVPIET+ Y+
Sbjct: 235 CCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSGGAGSMVPIETSSAYLE 294
Query: 297 NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
NER LL EDAECCICL SYEDG ELHALPCNHHFHS+CIVKWLKMNATCPLCKYNILKGN
Sbjct: 295 NERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGN 354
Query: 357 EQV 359
EQV
Sbjct: 355 EQV 357
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/350 (68%), Positives = 273/350 (78%), Gaps = 23/350 (6%)
Query: 13 SHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSK 72
+HAPLLRPR R LALLLGR GPS+LVRETAARELEERRADWGYSK
Sbjct: 7 AHAPLLRPR------RVGRTPVLALLLGR-----RGPSVLVRETAARELEERRADWGYSK 55
Query: 73 PVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT 132
PVV LD+ WN+ FV+V+A ML +++E P+T IRLWI GYA+QCLVHV LV +EYRRRN
Sbjct: 56 PVVLLDVTWNTVFVVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNV 115
Query: 133 ---RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
R RD+E DVN + EE+D + + S+ + F KRC S+NTM S LWW+VG
Sbjct: 116 IGGGRERDEE----SLDDVN---DSEEDDDVEFLNSSSSGFAKRCSSLNTMLSLLWWMVG 168
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 249
FYWVV+GGD+L+Q APRLYWLAVVFLAFDVFFA+FCV LACLIGIALCCCLPCII ILYA
Sbjct: 169 FYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIGILYA 228
Query: 250 VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECC 309
VAGQEGASE+DLS LPKYRF+V N+E G MVPIE + G ANER+L PEDAECC
Sbjct: 229 VAGQEGASESDLSTLPKYRFQVPGNEETPSPKGGSMVPIENSSG--ANERVLSPEDAECC 286
Query: 310 ICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
IC+S YED ELHALPCNHHFHSTCIVKWLKMNATCPLCK+NILKGNEQV
Sbjct: 287 ICISPYEDEAELHALPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV 336
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/359 (66%), Positives = 273/359 (76%), Gaps = 10/359 (2%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNA---ARPATLALLLGRATGRGHGPSMLVRETAA 58
S SSD+ A D HAPLLRPR ++ ARP LA+LLGR TG PSMLVRETAA
Sbjct: 3 SYSSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGH-RAPSMLVRETAA 61
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
R LEERR DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL
Sbjct: 62 RALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLF 121
Query: 119 HVVLVWMEYRRRN-TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESI 177
HVVLVW EY RRN TRR RD E + ++ D E + +D ST SF KRCESI
Sbjct: 122 HVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDN-----STTYSFVKRCESI 176
Query: 178 NTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALC 237
NT+ SF+WWI+GFYWVV GGD LL AP LYWL+V+FLA DVFFA+FCVVLACL+GIALC
Sbjct: 177 NTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALC 236
Query: 238 CCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN 297
CCLPCIIA+LYAVAG EG SEA+L +LP Y+F+ +++EK G GKMVPI NG +A
Sbjct: 237 CCLPCIIALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLAT 296
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
ER LL EDA+CCICLSSYEDG ELHALPCNHHFHSTCIVKWLKM ATCPLCKYNILKG
Sbjct: 297 ERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGT 355
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 272/361 (75%), Gaps = 12/361 (3%)
Query: 1 MSSSSDAAARSDSHAPLLRPRDPSVSPNAARP--ATLALLLGRATGRGHGPSMLVRETAA 58
S S D A+ PLL R P + +A+ LALLLGRATGR G SMLVRETAA
Sbjct: 6 FSPSMDPPAQ---QIPLLPSRQPPSNSDASTSPIGPLALLLGRATGR-RGTSMLVRETAA 61
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
RELEERR DWGYSKPVVALDI WN AFV VS +LI +++E+P+T IRLWI YA QCLV
Sbjct: 62 RELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLV 121
Query: 119 HVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESIN 178
HVVLVW E++RRN RR RD E + D +E +E+DG + +S KRCES+N
Sbjct: 122 HVVLVWFEFKRRNARRARDMETQQQQEPDGYVTNESDEDDG---GQRSFSSVAKRCESVN 178
Query: 179 TMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCC 238
TM S +WW+ GFYWVV+GG++L+Q AP LYWLAVVFLAFDVFFA+FCVVLACLIGIALCC
Sbjct: 179 TMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCC 238
Query: 239 CLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANE 298
CLPCIIAILYAVAGQEGA++ADLS+LPKYR+ V N G G MVP+ET+ Y+ E
Sbjct: 239 CLPCIIAILYAVAGQEGATDADLSMLPKYRYRVSNEPSP---GDGLMVPVETSSRYLTTE 295
Query: 299 RILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
R+LL EDAECCICLS YEDG ELHALPCNHHFH CI KWLKMNATCPLCKYNILK E
Sbjct: 296 RVLLCEDAECCICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNCEH 355
Query: 359 V 359
V
Sbjct: 356 V 356
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 268/349 (76%), Gaps = 9/349 (2%)
Query: 13 SHAPLLRPRDPSVSPNAARP--ATLALLLGRATGRGHGPSMLVRETAARELEERRADWGY 70
PLL R P + +A+ LALLLGRATGR G SMLVRETAARELEERR DWGY
Sbjct: 15 QQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGR-RGTSMLVRETAARELEERRIDWGY 73
Query: 71 SKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR 130
SKPVVALDI WN AFV VS +LI +++E+P+T IRLWI YA QCLVHVVLVW E++RR
Sbjct: 74 SKPVVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRR 133
Query: 131 NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGF 190
N RR RD E + D +E +E+DG + +S KRCES+NT+ S +WW+ GF
Sbjct: 134 NARRARDMETQQQQQPDGYVTNESDEDDG---GQRSLSSVAKRCESVNTLVSLIWWLFGF 190
Query: 191 YWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
YWVV+GG++L+Q AP LYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAILYAV
Sbjct: 191 YWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAV 250
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
AGQEGA++ADLS+LPKYR+ V N G G MVP+ET+ Y+ ER+LL EDAECCI
Sbjct: 251 AGQEGATDADLSMLPKYRYRVSNEPSP---GDGLMVPVETSSRYLTTERVLLREDAECCI 307
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
CLS YEDG ELHALPCNHHFH CI KWLKMNATCPLCKYNILK +E V
Sbjct: 308 CLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNSEPV 356
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/357 (70%), Positives = 281/357 (78%), Gaps = 14/357 (3%)
Query: 4 SSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEE 63
SS +AR HAPLL PR + AAR LALLLGR RGH S++VRETAARELEE
Sbjct: 2 SSPNSAR-QPHAPLLLPRPDA----AARLPVLALLLGR---RGH--SVMVRETAARELEE 51
Query: 64 RRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLV 123
RRADW YSKPVVALD+ WN AFV+VSA ML T+ E P+T IR WICGYALQCL+HV LV
Sbjct: 52 RRADWTYSKPVVALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALV 111
Query: 124 WMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF 183
W+EYRRRN +D D+ DVN+ ED+ +S+ T FTKRC S+NTM S
Sbjct: 112 WLEYRRRNDAPGDEDSAANLDYDDVNDSDEDDVG---TSGSSSSTGFTKRCASLNTMISL 168
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
LWW+VGFYWVVSGGD+LLQ APRLYWL VVFLAFDVFFAIFCVVLACLIGIALCCCLPCI
Sbjct: 169 LWWMVGFYWVVSGGDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 228
Query: 244 IAILYAVAGQEGASEADLSILPKYRFE-VQNNDEKLGVGAGKMVPIETNGGYVANERILL 302
IAILYAVAGQEGASE+DLSILPKYRF+ + N + G G M+P+ET+ GY NER L
Sbjct: 229 IAILYAVAGQEGASESDLSILPKYRFQMLSNEETPGEGGGGSMIPMETSNGYSVNERTLS 288
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
PEDAECCIC+SSYEDG ELH LPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ+
Sbjct: 289 PEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQI 345
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/322 (76%), Positives = 269/322 (83%), Gaps = 28/322 (8%)
Query: 36 ALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLII 95
A+LLGRATGR GPSMLVRETAAREL+ERRAD GYSKPVVALDI+WN+AFV+VS ML++
Sbjct: 1 AVLLGRATGR-RGPSMLVRETAARELDERRADLGYSKPVVALDILWNAAFVVVSVTMLVV 59
Query: 96 TINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE 155
T ERP+T IRLWICGY+LQCLVHV+LVW+EYRRRNTRR RD E
Sbjct: 60 TAKERPNTPIRLWICGYSLQCLVHVILVWLEYRRRNTRRGRDVE---------------- 103
Query: 156 EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFL 215
+ FTKRCES+NTM SFLWWIVGFYWVVSGGD LLQ APRLYWLAVVFL
Sbjct: 104 ----------SEQHFTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFL 153
Query: 216 AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNND 275
AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKY++ V N+
Sbjct: 154 AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNE 213
Query: 276 EKLG-VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
EK VGAGKMVP+ET+ GY++ ER+LLPEDAECCICLS YEDG ELHALPCNHHFH+ C
Sbjct: 214 EKRPRVGAGKMVPVETSSGYLSTERVLLPEDAECCICLSPYEDGAELHALPCNHHFHAMC 273
Query: 335 IVKWLKMNATCPLCKYNILKGN 356
IVKWLKMNATCPLCKYNILKGN
Sbjct: 274 IVKWLKMNATCPLCKYNILKGN 295
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/270 (77%), Positives = 228/270 (84%), Gaps = 3/270 (1%)
Query: 92 MLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVN-- 149
MLI T ERP+T IRLWICGYALQC VHVVLVW+EYRRRN RRVRD+E + +
Sbjct: 1 MLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDV 60
Query: 150 NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
NDSEDE+ + ++S TKRCES+NTMASFLWWIVGFYWVVSGG+ LLQ APRLYW
Sbjct: 61 NDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYW 120
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF 269
LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLS+LP+YRF
Sbjct: 121 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRF 180
Query: 270 EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHH 329
E NN+EK GVGAG M+P ET+ GY+ANERILLPEDAECCICL SYEDGT+L ALPCN H
Sbjct: 181 EA-NNEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICLHSYEDGTKLPALPCNPH 239
Query: 330 FHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
F STCI KWLK ATCPLCKY ILKG+EQ+
Sbjct: 240 FPSTCISKWLKKKATCPLCKYKILKGSEQI 269
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/338 (61%), Positives = 246/338 (72%), Gaps = 10/338 (2%)
Query: 24 SVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
S SP+AARP+ LA L+GRA GR GPSMLVRETAA +L+ RRADW +S+PVVALDI WN
Sbjct: 35 SPSPSAARPSRLAALIGRAAGR-RGPSMLVRETAALQLQRRRADWAHSRPVVALDIAWNV 93
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR---RVRDDEM 140
AF +AA+L + E P +RLW+ GYA QCLVHV LV + RR R D E
Sbjct: 94 AFAAAAAAVLASSAEESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRARGSASDVES 153
Query: 141 GGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLL 200
G + + R R+S T RCE++NT+ SFLWWI+GFYW+VSGG++L
Sbjct: 154 AGA------GTDSSDADSEDDERAEGRSSRTSRCETMNTLISFLWWIIGFYWLVSGGEVL 207
Query: 201 LQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEAD 260
APRLYWL VVFLAFDVFFA+FCV +AC IGIALCCCLPC+IAILYA+AGQEGAS+AD
Sbjct: 208 EYGAPRLYWLTVVFLAFDVFFAVFCVAVACFIGIALCCCLPCVIAILYALAGQEGASDAD 267
Query: 261 LSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTE 320
+S+LP+YRF + D + G G M+PI N G +ERILL EDAECC+CLSSYEDG E
Sbjct: 268 ISVLPRYRFSDPSEDGEKGTDEGLMIPILNNSGVSTSERILLREDAECCVCLSSYEDGAE 327
Query: 321 LHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
L ALPCNHHFH TCI KWL+MNATCPLCKYNILKG++
Sbjct: 328 LSALPCNHHFHWTCITKWLRMNATCPLCKYNILKGSDS 365
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/332 (61%), Positives = 244/332 (73%), Gaps = 1/332 (0%)
Query: 27 PNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFV 86
P AARP+ LA L+GRA GR GPSMLVRETAA +LE RRADW +S+PVVALD+ WN AF
Sbjct: 36 PPAARPSRLAALIGRAAGR-RGPSMLVRETAALQLERRRADWAHSRPVVALDVAWNVAFA 94
Query: 87 IVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR 146
+AA+L + E P+ +RLW+ GYALQC+VHV LV RR D
Sbjct: 95 AAAAAVLAASAAESPAKPLRLWLVGYALQCVVHVSLVCSGPGRRRRAARARGPDVESDAA 154
Query: 147 DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPR 206
+ D E+D R+S +RCES+NT+ SFLWWI+GFYWVVSGGD+L Q APR
Sbjct: 155 NAGPDGSGSEDDDDEEAMDERSSSVERCESVNTLVSFLWWIIGFYWVVSGGDMLEQGAPR 214
Query: 207 LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPK 266
LYWL VVFLAFDVFFA+FCV +AC IG+ALCCCLPC++AILYA+ GQEGAS+AD+ +LP+
Sbjct: 215 LYWLTVVFLAFDVFFAVFCVAVACFIGVALCCCLPCVVAILYALVGQEGASDADIGVLPR 274
Query: 267 YRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPC 326
Y++ V N D + G G M+PI N G +ERILL EDAECCICLSSYEDG EL ALPC
Sbjct: 275 YKYSVANEDVEKGTDEGLMIPILNNSGASTSERILLNEDAECCICLSSYEDGVELSALPC 334
Query: 327 NHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
NHHFHSTCI KWL+M+ATCPLCK+NILKG+E
Sbjct: 335 NHHFHSTCITKWLRMHATCPLCKFNILKGSEN 366
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/361 (57%), Positives = 249/361 (68%), Gaps = 25/361 (6%)
Query: 16 PLLRPRDP---------------SVSPNAARPATLALLLGRATGRGHGPSMLVRETAARE 60
PLLRP P S P+A RP+ LA L+GRA GR GPSMLVRETAA +
Sbjct: 13 PLLRPPSPQPNLRADAASSGDPASPPPSAVRPSRLAALIGRAAGR-RGPSMLVRETAALQ 71
Query: 61 LEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHV 120
L+ RRADW +S+PV+ALDI WN AF +AA+L + E P +RLW+ GYA QCLVHV
Sbjct: 72 LQRRRADWAHSRPVLALDIAWNVAFAAAAAAVLSSSAEESPVKPLRLWVVGYAAQCLVHV 131
Query: 121 VLVWMEYRRRNTR---RVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESI 177
LV + RR R D E G + + R R+S+T RCE++
Sbjct: 132 GLVCADTRRETRRARRSASDVESAGA------GTDSSDADSEDDERAEGRSSYTGRCETM 185
Query: 178 NTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALC 237
NT+ SFLWWI+GFYW+ SGG++L APRLYWL +VFLAFDVFFA+FCV +AC IGIALC
Sbjct: 186 NTLISFLWWIIGFYWIFSGGEVLEHGAPRLYWLTIVFLAFDVFFAVFCVAVACFIGIALC 245
Query: 238 CCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN 297
CCLPC+IAILYA+AGQEGAS+AD+S+L +YR+ + D + GV G M+PI N G +
Sbjct: 246 CCLPCVIAILYALAGQEGASDADISVLLRYRYSDPSEDGEKGVDEGLMIPILNNSGMSTS 305
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
ERILL EDAECCICLSSYEDG EL ALPCNHHFH CI KWL+MNATCPLCKYNILKG++
Sbjct: 306 ERILLREDAECCICLSSYEDGAELSALPCNHHFHWPCITKWLRMNATCPLCKYNILKGSD 365
Query: 358 Q 358
Sbjct: 366 S 366
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 228/324 (70%), Gaps = 18/324 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSM+VRE AA++LEER++DW YSKPVV LD++WN +FV+VS +L T+ ERP+T +R+W
Sbjct: 49 PSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR------VRDDEMGGEDFRDVNND---SEDEEEDG 159
I GYALQCL+H++ V EY RRN +R E VN+ + E E G
Sbjct: 109 IAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETG 168
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
T R+S KR ES+NTM SF WWIVGFYW+++GG L + APRLYWL +VFLAFDV
Sbjct: 169 -RQETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDV 227
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF-----EVQNN 274
FF FC +AC+IGIA+CCCLPCIIAILYAVA Q+GASE ++++LPKYRF +NN
Sbjct: 228 FFVAFCAAVACMIGIAVCCCLPCIIAILYAVANQDGASETEINLLPKYRFCRIGPSEKNN 287
Query: 275 DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
EK G M I G +ER+L EDAECCICLS+YEDG EL+ LPCNHHFH C
Sbjct: 288 SEKSPSYGGVMTLI---CGESTSERVLGAEDAECCICLSAYEDGVELYELPCNHHFHCGC 344
Query: 335 IVKWLKMNATCPLCKYNILKGNEQ 358
I KWL++NATCPLCKYN++K ++
Sbjct: 345 IAKWLRINATCPLCKYNVVKNDDN 368
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 228/324 (70%), Gaps = 18/324 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSM+VRE AA++LEER++DW YSKPVV LD++WN +FV+VS +L T+ ERP+T +R+W
Sbjct: 49 PSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPMRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR------VRDDEMGGEDFRDVNND---SEDEEEDG 159
I GYALQCL+H++ V EY RRN +R E VN+ + E E G
Sbjct: 109 IAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETG 168
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
T R+S KR ES+NTM SF WWIVGFYW+++GG L + APRLYWL +VFLAFDV
Sbjct: 169 -RQETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDV 227
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF-----EVQNN 274
FF FC +AC+IGIA+CCCLPCIIAILYAVA Q+GASE ++++LPKYRF +NN
Sbjct: 228 FFVAFCAAVACMIGIAVCCCLPCIIAILYAVANQDGASETEINLLPKYRFCRIGPSEKNN 287
Query: 275 DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
EK G M I G +ER+L EDAECCICLS+YEDG EL+ LPCNHHFH C
Sbjct: 288 SEKSPSYGGVMTLI---CGESTSERVLGAEDAECCICLSAYEDGVELYELPCNHHFHCGC 344
Query: 335 IVKWLKMNATCPLCKYNILKGNEQ 358
I KWL++NATCPLCKYN++K ++
Sbjct: 345 IAKWLRINATCPLCKYNVVKNDDN 368
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/366 (52%), Positives = 240/366 (65%), Gaps = 25/366 (6%)
Query: 6 DAAARSDSHAPLLRPRDPSVS--------------PNAARPATLALLLGRATGRGHGPSM 51
+ A S H PLLR PS + P+AARP+ LA L+GR G GPSM
Sbjct: 2 ETATTSPEH-PLLRRSSPSSNTNADADSVNLSSPPPSAARPSRLAALIGR-VGWPRGPSM 59
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
+V E +L RRADW +S+PVV LDI WN A +A +L + + P +RLW+ G
Sbjct: 60 MVHEATTLQLHRRRADWAHSRPVVTLDIAWNVACAAAAALVLASSAKDSPVKPLRLWLVG 119
Query: 112 YALQCLVHVVLVW--MEYRRRNT-RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
YA QCLVHV +V+ +E R R+ D E G DSED+E R+
Sbjct: 120 YAAQCLVHVGIVFTRLETRARHAWGPASDVESAGAGTDSSGTDSEDDET------AEGRS 173
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S RCE+IN + SFLWWI+GFYW+VSGG++L APRLYWL +VFLAFDVFFA+FCV +
Sbjct: 174 SHASRCETINRLISFLWWIIGFYWLVSGGEVLEYGAPRLYWLTIVFLAFDVFFAVFCVAM 233
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPI 288
+C IGIALCCCLPC++AILYA+AG+ GAS+ D+S+LP+YR+ + D + G M+PI
Sbjct: 234 SCFIGIALCCCLPCVVAILYALAGKVGASDGDISVLPRYRYYDPSEDSEEETDEGLMIPI 293
Query: 289 ETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLC 348
N G +ERILL EDAECC+CLSSYEDG EL ALPC HHFH +CI WL+MNATCPLC
Sbjct: 294 LNNSGMSTSERILLREDAECCVCLSSYEDGAELSALPCRHHFHWSCITTWLRMNATCPLC 353
Query: 349 KYNILK 354
KYNIL+
Sbjct: 354 KYNILE 359
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/329 (61%), Positives = 241/329 (73%), Gaps = 4/329 (1%)
Query: 31 RPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSA 90
RP+ LA L+GRA GR GPSMLVRETAA +L+ RRADW +S+PVVALD+ WN AF +A
Sbjct: 42 RPSRLAALIGRAAGR-RGPSMLVRETAALQLDRRRADWAHSRPVVALDVAWNVAFAAAAA 100
Query: 91 AMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEM-GGEDFRDVN 149
A+L + E P +RLW+ GYALQC+VHV LV RRR R ++ G N
Sbjct: 101 AVLAASTAESPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARGPDIESGAATAGAN 160
Query: 150 NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
+ DE D R S T RCES+NTM SFLWWI+GFYWVV+GGD+L Q APRLYW
Sbjct: 161 SSESDEGNDEEAMEE--RASSTDRCESVNTMVSFLWWIIGFYWVVTGGDVLEQGAPRLYW 218
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF 269
L VVFLAFDVFFA+FCVV+AC IG+ALCCCLPC++AILYA+ GQEGAS+AD+ +LP+Y++
Sbjct: 219 LTVVFLAFDVFFAVFCVVVACFIGVALCCCLPCVVAILYALVGQEGASDADIGVLPRYKY 278
Query: 270 EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHH 329
+ + + G G M+PI N G +ERILL EDAECCICLSSYEDG EL ALPCNHH
Sbjct: 279 SDPSENGEKGTDEGVMIPILNNSGTSTSERILLREDAECCICLSSYEDGVELSALPCNHH 338
Query: 330 FHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
FHS CI KWL+M+A CPLCKYNILKG+E
Sbjct: 339 FHSMCITKWLRMHANCPLCKYNILKGSEN 367
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 223/321 (69%), Gaps = 23/321 (7%)
Query: 60 ELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVH 119
+LE RRADW +S+PVVALDI WN AF +AA+L+ + E P T +RLW+ GYALQCLVH
Sbjct: 2 QLERRRADWAHSRPVVALDIAWNVAFAAAAAAVLVASTEESPVTPLRLWLVGYALQCLVH 61
Query: 120 VVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINT 179
V LV + RRR R ++ D ++ + D R+SF KRCESINT
Sbjct: 62 VGLVCSDSRRRPAH-ARSSDVESADGDAAGAGTDSSDSDDDDEGREQRSSFAKRCESINT 120
Query: 180 MASFLWWIVGFYWVVSGGDLLLQAAPRLYW----------------------LAVVFLAF 217
M SFLWWI+GFYWVVSGGD+L Q APRLYW L+VVFLAF
Sbjct: 121 MVSFLWWIIGFYWVVSGGDVLEQDAPRLYWYCGPKPVPITDYFMIVQSNVHMLSVVFLAF 180
Query: 218 DVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK 277
DVFFA+FCV +AC IGIALCCCLPC+IAILYA+AGQEGAS+AD+ LP+YR+ + D +
Sbjct: 181 DVFFAVFCVAMACFIGIALCCCLPCVIAILYALAGQEGASDADIGFLPRYRYSDPSEDGQ 240
Query: 278 LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVK 337
G G M+P+ N G +ERILL EDAECCICLSSYEDG EL ALPCNHHFH TCI K
Sbjct: 241 KGTDEGVMIPVLNNSGTSTSERILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITK 300
Query: 338 WLKMNATCPLCKYNILKGNEQ 358
WL+M+ATCPLCKYNILKG+E
Sbjct: 301 WLRMHATCPLCKYNILKGSES 321
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 231/347 (66%), Gaps = 23/347 (6%)
Query: 26 SPNAARPATLALLLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWN 82
SP R A LL RA+GR PS+ VRETAA +LEER++DW YSKP++ LD++WN
Sbjct: 39 SPQPLRGA--VRLLRRASGRQMMLREPSVRVRETAAEQLEERQSDWAYSKPIILLDLLWN 96
Query: 83 SAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRV------R 136
AFVI+S +L ++ +E+PS +R WI GYALQC++H+ V +EY+RR + R
Sbjct: 97 LAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQCIIHMSCVAVEYKRRRSTREPTGLDRN 156
Query: 137 DDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSG 196
D GED V+ D+ ++ K ES NTM SF+WW++GFYWV +G
Sbjct: 157 SDWTSGEDSNSVSGSDGDDYATEQTVNEDESSNLVKHIESANTMFSFIWWLLGFYWVTAG 216
Query: 197 GDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGA 256
G L++ +P+LYWL++ FLAFDV F + CV +ACL+G+A+CCCLPCIIAILYAV QEGA
Sbjct: 217 GQELIEGSPQLYWLSITFLAFDVVFVLICVAIACLVGVAICCCLPCIIAILYAVTDQEGA 276
Query: 257 SEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN-------ERILLPEDAECC 309
++ ++ LPKY F + EK+ G + E++GG ++N ER L PED+ECC
Sbjct: 277 TKEEIERLPKYTFNRTGDVEKVN---GDIQ--ESSGGIMSNCDTDAPTERFLRPEDSECC 331
Query: 310 ICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
ICLS+YE+G EL LPCNHHFH CI KWL MNATCPLCK+NILK N
Sbjct: 332 ICLSAYENGAELRELPCNHHFHCNCIDKWLHMNATCPLCKFNILKPN 378
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/339 (50%), Positives = 224/339 (66%), Gaps = 27/339 (7%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +A+GR PSM+VRE AA +LEER++DW YSKPVV LDI+WN AFV +A +L
Sbjct: 47 ARFLRQASGRRLMREPSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAATVL 106
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDE--MGGEDFRDVNND 151
+++ NE P+ +RLWI GYALQ ++HV V +EYRRR R + + G+ D+++
Sbjct: 107 VLSRNENPNMPLRLWIVGYALQSVLHVACVCVEYRRRLRHREHSNAAAVSGDGSGDLSSP 166
Query: 152 SEDE-------EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAA 204
S D ++DGI S K ES NTM SF+WW+VGFYWV + + L+Q +
Sbjct: 167 SMDGSGHYVSFDDDGI--------SMAKHLESANTMFSFIWWVVGFYWVSADSEALVQDS 218
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P LYWL + FL FDVFF +FC+ LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L
Sbjct: 219 PLLYWLCIAFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQL 278
Query: 265 PKYRFEVQNNDEK-----LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGT 319
K++F+ +EK G G M+ + + E +L EDAECCICLS+Y+DG
Sbjct: 279 SKFKFQRTETNEKHAGNTQGAAGGIMIECDADSPI---EHVLSDEDAECCICLSAYDDGV 335
Query: 320 ELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
EL LPC+HHFH C+ KWL +NATCPLCKYNILK
Sbjct: 336 ELRKLPCSHHFHCACVDKWLHINATCPLCKYNILKSTSH 374
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 178/341 (52%), Positives = 223/341 (65%), Gaps = 27/341 (7%)
Query: 38 LLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
LL RA+ R PS+ VRE AA +LEER++ W YSKP++ LDI+WN FVIVS A+L
Sbjct: 45 LLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFVFVIVSIAILG 104
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS-E 153
+ E P +RLWI GY QCL+HV V EY+RR R + GED + + S
Sbjct: 105 FSSEEDPDVPLRLWIIGYNFQCLLHVGCVIAEYKRR---REANSPPSGEDSSNHESLSGS 161
Query: 154 DEEEDGIVYRTSTR---TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWL 210
D+E DG + TSFTK ES NTM SF+WWI+GFYWV + + L Q++P+LYWL
Sbjct: 162 DDESDGYSINDTDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWL 221
Query: 211 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFE 270
V FLAFDV F + CV +A LIGIA+CCCLPCIIAILYA+A QEGA + ++ L K++F
Sbjct: 222 CVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKFL 281
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVA-------NERILLPEDAECCICLSSYEDGTELHA 323
V N EK+ G++ ET GG + ER+L EDAEC ICL +YEDG EL
Sbjct: 282 VVKNSEKVN---GEIR--ETQGGIMTGLGAESQTERVLSSEDAECSICLCAYEDGVELRE 336
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILK-----GNEQV 359
LPC HHFHS C+ KWL++NATCPLCK+NILK G+EQV
Sbjct: 337 LPCRHHFHSLCVDKWLRINATCPLCKFNILKNGEPSGSEQV 377
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 220/340 (64%), Gaps = 23/340 (6%)
Query: 38 LLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
LL RA+ R PS+ VRE AA +LEER++ W YSKP++ LDI+WN FVIVS A+L
Sbjct: 45 LLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILG 104
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNN--DS 152
+ +E P +RLWI GY +QCL HV V EY+RR R GED + + S
Sbjct: 105 FSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRR--RVANSPPPSGEDSSNHESLSGS 162
Query: 153 EDEEEDGIVYRTSTR---TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
EDE + + T TSFTK ES NTM SF+WWI+GFYWV + + L Q++P+LYW
Sbjct: 163 EDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYW 222
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF 269
L V FLAFDV F + CV +A LIGIA+CCCLPCIIAILYA+A QEGA + ++ L K++F
Sbjct: 223 LCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKF 282
Query: 270 EVQNNDEKLG-----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
N EK+ G M ++T ER+LL EDAEC ICL +YEDG EL L
Sbjct: 283 LTVKNSEKVNGEIRETQGGIMTGLDTES---QTERMLLSEDAECSICLCAYEDGVELREL 339
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNILK-----GNEQV 359
PC HHFHS C+ KWL++NATCPLCK+NILK G+EQV
Sbjct: 340 PCRHHFHSLCVDKWLRINATCPLCKFNILKNGEPSGSEQV 379
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 220/340 (64%), Gaps = 23/340 (6%)
Query: 38 LLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
LL RA+ R PS+ VRE AA +LEER++ W YSKP++ LDI+WN FVIVS A+L
Sbjct: 28 LLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILG 87
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNN--DS 152
+ +E P +RLWI GY +QCL HV V EY+RR R GED + + S
Sbjct: 88 FSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRR--RVANSPPPSGEDSSNHESLSGS 145
Query: 153 EDEEEDGIVYRTSTR---TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
EDE + + T TSFTK ES NTM SF+WWI+GFYWV + + L Q++P+LYW
Sbjct: 146 EDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYW 205
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF 269
L V FLAFDV F + CV +A LIGIA+CCCLPCIIAILYA+A QEGA + ++ L K++F
Sbjct: 206 LCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKF 265
Query: 270 EVQNNDEKLG-----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
N EK+ G M ++T ER+LL EDAEC ICL +YEDG EL L
Sbjct: 266 LTVKNSEKVNGEIRETQGGIMTGLDTES---QTERMLLSEDAECSICLCAYEDGVELREL 322
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNILK-----GNEQV 359
PC HHFHS C+ KWL++NATCPLCK+NILK G+EQV
Sbjct: 323 PCRHHFHSLCVDKWLRINATCPLCKFNILKNGEPSGSEQV 362
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 225/361 (62%), Gaps = 30/361 (8%)
Query: 9 ARSDSHAPLL-RPRDPSVSPNAARPATLALLLGRATGRG---HGPSMLVRETAARELEER 64
A D+ +PLL R R PS A + LL RA+ RG S+ VRETAA ++EER
Sbjct: 16 ATDDASSPLLNRNRRPSQPLRGA----ASRLLRRASSRGMMLRESSVRVRETAAEQIEER 71
Query: 65 RADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW 124
+++W YSKPV+ LD++WN AFV V+ + + E P +R WI GY LQCL+H+ V
Sbjct: 72 QSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVI 131
Query: 125 MEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL 184
EYRRR + R D + S DG + S K ES N + SF+
Sbjct: 132 AEYRRRESNRDLDSGLS----------SVQGSSDGYGAEIESGNSVAKHIESTNAIFSFV 181
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
WW++GFYWV + + L Q++P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCII
Sbjct: 182 WWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCII 241
Query: 245 AILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA-------N 297
A+LYA+A +EGAS+ ++ LPK++F N EK+ G++ ET GG + +
Sbjct: 242 AVLYALADREGASDEEIEKLPKFKFLTVRNSEKVN---GEIR--ETRGGIMTQLGVDFPS 296
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
ER+L ++AECCICL YEDGTEL L C HHFH CI KWL++NATCPLCK+NILK E
Sbjct: 297 ERVLSSDEAECCICLCDYEDGTELRELFCRHHFHEACIDKWLRINATCPLCKFNILKTGE 356
Query: 358 Q 358
Q
Sbjct: 357 Q 357
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/335 (52%), Positives = 220/335 (65%), Gaps = 19/335 (5%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +A+ R PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV+V+A +L
Sbjct: 47 ARFLRQASNRRTMREPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATIL 106
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVR-----DDEMGGEDFRDV 148
+++ NE PS +RLWI GYA QC++H+V V +EYRRR R ++ +
Sbjct: 107 VLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSISGL 166
Query: 149 NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLY 208
+ + + +S K ES NTM SF+WWI+GFYWV +GG L QA+P LY
Sbjct: 167 GSRANSSHYVSLAQLDENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLY 226
Query: 209 WLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYR 268
WL ++FL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA++ D+ L K++
Sbjct: 227 WLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFK 286
Query: 269 FEVQNNDEKLGVGAGKMVPIETNGGYVAN-------ERILLPEDAECCICLSSYEDGTEL 321
F N EK E GG ++ ER LL EDAECCICLS+YEDG EL
Sbjct: 287 FRKVENTEKFSTDVQ-----EPLGGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVEL 341
Query: 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
LPC HHFH C+ KWL +NATCPLCKYNILK +
Sbjct: 342 RELPCGHHFHCACVDKWLYINATCPLCKYNILKNS 376
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/342 (50%), Positives = 221/342 (64%), Gaps = 30/342 (8%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +A+GR PSM+VRE AA +LEER++DW YSKPVV LDI+WN AFV +A +
Sbjct: 45 ARFLRQASGRRLMREPSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVF 104
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR--DVNND 151
I++ NE P+ +RLWI GYALQC++HV V +EY+RR RR + + D+
Sbjct: 105 ILSRNENPNMPLRLWIVGYALQCVLHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPP 164
Query: 152 SEDE----------EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLL 201
S D ++DGI S K ES NTM SF+WW+VGFYWV + + L+
Sbjct: 165 SMDGSGHYVSLAQFDDDGI--------SMAKHLESANTMFSFIWWVVGFYWVSADSESLV 216
Query: 202 QAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADL 261
+ +P LYWL + FL FDVFF +FC+ LAC++GIA+CCCLPCIIA+LYAVA QEGAS+ D+
Sbjct: 217 RDSPLLYWLCIAFLGFDVFFVVFCMALACIVGIAVCCCLPCIIALLYAVADQEGASKEDI 276
Query: 262 SILPKYRFEVQNNDEKL-----GVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYE 316
L K++F+ +EKL G G M+ + + E +L EDAECCICLS+Y+
Sbjct: 277 EQLSKFKFQRTETNEKLAGNTQGAAGGIMIECDADSPI---EHVLSDEDAECCICLSAYD 333
Query: 317 DGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
DG EL LPC HHFH C+ KWL +NATCPLCKYNILK
Sbjct: 334 DGVELRQLPCGHHFHCACVDKWLHINATCPLCKYNILKSTSH 375
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/362 (52%), Positives = 248/362 (68%), Gaps = 30/362 (8%)
Query: 23 PSVSPNAARPAT-------LALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKP 73
P+ S + AR + A L RA+ R PSMLVRETAA +LEER++DW YS+P
Sbjct: 31 PNASDDGARSLSRRASIQGAARFLRRASSRRIMREPSMLVRETAAEQLEERQSDWAYSRP 90
Query: 74 VVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR--N 131
VV LDI+WN AFV+V+ +L+++ +E P+ +R+W+ GYALQCL+H++ V EYRRR N
Sbjct: 91 VVVLDIIWNLAFVVVATVVLVLSRHENPNMPVRVWVVGYALQCLLHMICVCFEYRRRHSN 150
Query: 132 TRRVRDDEMGGEDF---------------RDVNNDSEDEEEDGIVYRTSTRTSFTKRCES 176
++ R + G + ++D+ DEE D ++ ++ RTS KR ES
Sbjct: 151 AQQQRSNSGGQSGHTNNNNNSANQQSPGEQQESDDATDEEVDEVL--STERTSIAKRLES 208
Query: 177 INTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 236
NTM SF+WWIVGFYW+ +GG +L AP+LYWL VVFLAFDVFF +FCV LAC+IGIA+
Sbjct: 209 ANTMFSFIWWIVGFYWISAGGQILTHDAPQLYWLCVVFLAFDVFFVVFCVALACVIGIAV 268
Query: 237 CCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKL-GVGAGKMVPI-ETNGGY 294
CCCLPCIIAILYAVA QEGASE D+ +LPKY+F+ EK+ G +G I G
Sbjct: 269 CCCLPCIIAILYAVADQEGASEEDIGLLPKYKFKSIGGSEKISGEKSGPFGGIMNLCTGE 328
Query: 295 VANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ ER+L EDAECCICLS+Y+DG EL LPC+HHFH TCI KWL++NATCPLCKYNI+K
Sbjct: 329 SSTERVLSAEDAECCICLSTYDDGVELRELPCSHHFHCTCIDKWLRINATCPLCKYNIIK 388
Query: 355 GN 356
+
Sbjct: 389 SS 390
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/380 (49%), Positives = 247/380 (65%), Gaps = 27/380 (7%)
Query: 1 MSSSSDAAARSDS---HAPLL----RPRDPSVSPNAARPATLALLLGRATGRGHGPSMLV 53
M++ ++R D+ APLL R R P+ A L GR R PS+LV
Sbjct: 1 MATPRSPSSRGDALLDSAPLLGGGTRRRGVLRRPSLRGTARLLRQGGRRAMRE--PSLLV 58
Query: 54 RETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
RETAA +LEER+ADW YS+PVVALD++WN AF++VSA +L+ + +E PS +R+WI GYA
Sbjct: 59 RETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYA 118
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVY----RTSTRTS 169
+QC++H+V V +EYR R+ +R M ++ R + S +ED V R
Sbjct: 119 VQCVLHIVCVAIEYRFRHRQR-GGPSMAADEERGTDGSSSSTDEDAGVSIPHGRIGNYVR 177
Query: 170 FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV LA
Sbjct: 178 IAKHLESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALA 237
Query: 230 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGVGAGK 284
C+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK G G
Sbjct: 238 CIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSGGI 297
Query: 285 MVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNAT 344
M+ TN E++L EDAECCICLS+Y+DG +L LPC HHFH CI KWL +NAT
Sbjct: 298 MIECGTNQPI---EKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINAT 354
Query: 345 CPLCKYNILK-----GNEQV 359
CPLCK N+ K G+E+V
Sbjct: 355 CPLCKLNVRKNSSSSGSEEV 374
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 206/321 (64%), Gaps = 18/321 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRE AA +LEER+ DW YSKP++ LD++WN AFV + +L +++ E P +R+W
Sbjct: 58 PSVRVRENAAEQLEERQTDWAYSKPIIFLDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVW 117
Query: 109 ICGYALQCLVHVVLVWMEYRRR----NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYR- 163
I GY+LQCL H+ V EY+RR + R D + +D D +DG+ R
Sbjct: 118 IIGYSLQCLFHIGCVIFEYKRRLFGTSARLEASDSTSVSE-----SDGGDSVDDGVEQRG 172
Query: 164 TSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAI 223
T K+ ES NTM SF+WWIVGFYWV +GG L +P+LYWL + FLAFDV F I
Sbjct: 173 NDGDTCVVKQLESANTMFSFIWWIVGFYWVTAGGQNLTNDSPQLYWLCITFLAFDVIFVI 232
Query: 224 FCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVG-- 281
C+ +ACLIG+A+CCCLPCII ILYA+ +EGA++ ++ LP Y+F + EK+
Sbjct: 233 ICIAVACLIGLAICCCLPCIIGILYAMTDREGATQEEIEQLPMYKFRRIGDFEKVNADFQ 292
Query: 282 ---AGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKW 338
G M E + ER L EDAECCICLS+YEDGTEL LPC HHFHSTCI KW
Sbjct: 293 ATFGGMMTECEID---TPTERRLSHEDAECCICLSAYEDGTELRQLPCQHHFHSTCIDKW 349
Query: 339 LKMNATCPLCKYNILKGNEQV 359
L +NATCPLCK NILK + +
Sbjct: 350 LYINATCPLCKLNILKASNHI 370
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 224/353 (63%), Gaps = 15/353 (4%)
Query: 15 APLLRPRDPSVSPNAARPATLALLLGRATGRG---HGPSMLVRETAARELEERRADWGYS 71
AP L PR +P + R T A RA+GR PS+ VRE AA E+E R+++W YS
Sbjct: 20 APFL-PRSRRRAPPSLR--TAATFFRRASGRRMMLREPSVRVREAAAAEVEGRQSEWAYS 76
Query: 72 KPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEY-RRR 130
+PVVALD+ WN+AF+ + A++L ++ +E P +R WI GY LQ +H + V E+ RRR
Sbjct: 77 RPVVALDVAWNAAFLAIGASVLALSADEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRR 136
Query: 131 NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGF 190
T + G +++S++E + S TK ES NTM SF+WWIVGF
Sbjct: 137 RTATISGTHSGSNVEWSFSSESDEEFYPSEQFLEGDGNSITKHIESANTMLSFIWWIVGF 196
Query: 191 YWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
YWV +GG L + +P+LYWL + FL+FDV + CV +ACLIGIA+CCCLPCI+AILY V
Sbjct: 197 YWVTAGGQSLTRDSPQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAILYVV 256
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLG----VGAGKMVPIETNGGYVANERILLPEDA 306
A QEGA++ ++ LPKY+F + +K G G M E+ A E ++ EDA
Sbjct: 257 ADQEGATKEEIEQLPKYKFIIIKEFKKEGDIEESSRGIMTESESE---TATEHVIALEDA 313
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK-GNEQ 358
ECCICLS+Y+DG EL LPCNHHFH TCI KWL +NATCPLCK+NIL+ GN
Sbjct: 314 ECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLINATCPLCKFNILRTGNHH 366
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/326 (53%), Positives = 226/326 (69%), Gaps = 21/326 (6%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++ +A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILTTAVVLVLSGDESPSVPLRIW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS---EDEEEDGIVYRTS 165
I GYA+QC+VH+V V +EYR R+ +R M ++ R + S +D E G R
Sbjct: 114 IAGYAVQCVVHMVCVAIEYRVRHGQR-GGSSMAADEERGTDGSSSSIDDAGESGPHGRIG 172
Query: 166 TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFC 225
S K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +VFLAFDVFF +FC
Sbjct: 173 YFASVAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFC 232
Query: 226 VVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKM 285
V LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +PKY+F + EK V
Sbjct: 233 VALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRRVDEPEKQSV----- 287
Query: 286 VPIETNGGYVAN-------ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKW 338
IE++GG + E++L EDAECCICLS Y+DG EL LPC HHFH CI KW
Sbjct: 288 TMIESSGGIMIECGTNQPIEKVLAAEDAECCICLSVYDDGAELRELPCGHHFHCACIDKW 347
Query: 339 LKMNATCPLCKYNILK-----GNEQV 359
L +NATCPLCK N+ K G+E+V
Sbjct: 348 LHINATCPLCKLNVRKNSSSSGSEEV 373
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/376 (50%), Positives = 247/376 (65%), Gaps = 29/376 (7%)
Query: 1 MSSSSDAAARSDS---HAPLL----RPRDPSVSPNAARPATLALLLGRATGRGHGPSMLV 53
M++ ++R D+ APLL R R P+ A L GR R PS+LV
Sbjct: 1 MATPRSPSSRGDALLDSAPLLGGGTRRRGVLRRPSLRGTARLLRQGGRRAMRE--PSLLV 58
Query: 54 RETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
RETAA +LEER+ADW YS+PVVALD++WN AF++VSA +L+ + +E PS +R+WI GYA
Sbjct: 59 RETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYA 118
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR 173
+QC++H+V V +EYR R+ +R M ++ R + S +ED V + R
Sbjct: 119 VQCVLHIVCVAIEYRFRHRQR-GGPSMAADEERGTDGSSSSTDEDAGV------SIPHGR 171
Query: 174 CESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV LAC+IG
Sbjct: 172 LESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 231
Query: 234 IALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGVGAGKMVPI 288
IA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK G G M+
Sbjct: 232 IAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSGGIMIEC 291
Query: 289 ETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLC 348
TN E++L EDAECCICLS+Y+DG +L LPC HHFH CI KWL +NATCPLC
Sbjct: 292 GTNQPI---EKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLC 348
Query: 349 KYNILK-----GNEQV 359
K N+ K G+E+V
Sbjct: 349 KLNVRKNSSSSGSEEV 364
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 180/340 (52%), Positives = 227/340 (66%), Gaps = 22/340 (6%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ R PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L
Sbjct: 42 ARFLRRASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVL 101
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD----DEMGGEDFRDVN 149
+++ +E PST +RLWI GY LQC++H+V V +EY+RR RR+ + GG ++
Sbjct: 102 VMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRR--RRLVSSGALERSGGWGSGHLS 159
Query: 150 NDSEDEEEDGIVYRTSTR------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQA 203
+ S +E D I YR R TS K ES NTM SF+WWI+GFYWV +GG L +
Sbjct: 160 SSSGSDEGDPIDYRVEVRNRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRD 219
Query: 204 APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSI 263
+P+LYWL +VFLAFDVFF + CV +AC+IGIA+CCCLPCIIAILY VA QEGA++ ++
Sbjct: 220 SPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIER 279
Query: 264 LPKYRFEVQNNDEKLG-----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDG 318
LPKY+F EKL G M +T+ E ++ EDAECCICLS+YED
Sbjct: 280 LPKYKFRRIGESEKLNGEIQESFGGIMTECDTD---TPMEHVIPQEDAECCICLSAYEDE 336
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
TEL LPC H FH TCI KWL +NATCPLCK NILK Q
Sbjct: 337 TELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKNASQ 376
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/376 (50%), Positives = 245/376 (65%), Gaps = 39/376 (10%)
Query: 1 MSSSSDAAARSDS---HAPLL----RPRDPSVSPNAARPATLALLLGRATGRGHGPSMLV 53
M++ ++R D+ APLL R R P+ A L GR R PS+LV
Sbjct: 1 MATPRSPSSRGDALLDSAPLLGGGTRRRGVLRRPSLRGTARLLRQGGRRAMRE--PSLLV 58
Query: 54 RETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
RETAA +LEER+ADW YS+PVVALD++WN AF++VSA +L+ + +E PS +R+WI GYA
Sbjct: 59 RETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYA 118
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR 173
+QC++H+V V +EYR R+ +R GG + DEE T +S K
Sbjct: 119 VQCVLHIVCVAIEYRFRHRQR------GGPSM------AADEERG-----TDGSSSIAKH 161
Query: 174 CESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV LAC+IG
Sbjct: 162 LESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 221
Query: 234 IALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGVGAGKMVPI 288
IA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK G G M+
Sbjct: 222 IAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSGGIMIEC 281
Query: 289 ETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLC 348
TN E++L EDAECCICLS+Y+DG +L LPC HHFH CI KWL +NATCPLC
Sbjct: 282 GTNQPI---EKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLC 338
Query: 349 KYNILK-----GNEQV 359
K N+ K G+E+V
Sbjct: 339 KLNVRKNSSSSGSEEV 354
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/341 (52%), Positives = 227/341 (66%), Gaps = 16/341 (4%)
Query: 30 ARPATLALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVI 87
+R A L RA R PSMLVRE+AA +LE R++DW YSKPVV LD++WN AFV
Sbjct: 2 SRVQGAARFLRRAGSRRLMREPSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVQ 61
Query: 88 VSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD---DEMGGED 144
VS A+L+++ E +R+WI GYALQC+VH++ V EY RR + +
Sbjct: 62 VSLAVLVLSKKETNCNELRIWIIGYALQCVVHMLCVCCEYLRRQQQVNANPSSVSSSNST 121
Query: 145 FRDVNNDSEDEE----EDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLL 200
+ +NN D + +DG+ S S+ KR ES NTM SF+WW+VGFYW+ +GG L
Sbjct: 122 YAPINNGENDVDSGFDDDGL----SNEASWAKRLESANTMFSFVWWVVGFYWITAGGQSL 177
Query: 201 LQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEAD 260
AP +YWL V+FL FDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA QEGASE D
Sbjct: 178 AVDAPYVYWLCVLFLTFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEED 237
Query: 261 LSILPKYRFEVQNNDEKLGVGAGK-MVPIETNGGYVAN--ERILLPEDAECCICLSSYED 317
++ LP +F ++D K+ + + + T G N ER L +DAECCICLSSYED
Sbjct: 238 INNLPTAKFRKISSDGKITANYERALAGVMTFVGASENLTERSLFEDDAECCICLSSYED 297
Query: 318 GTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
G EL LPC+HHFHSTCI+KWL++NATCPLCK+NI+ GN
Sbjct: 298 GVELRDLPCSHHFHSTCIIKWLRINATCPLCKFNIVHGNRN 338
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/330 (53%), Positives = 224/330 (67%), Gaps = 28/330 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD +WN AF++VSA +L+++ +E PS +R W
Sbjct: 55 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 114
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF---------RDVNNDSEDEEEDG 159
I GY QC+VH+V V +EY +R ++GG ++ S+D+ E G
Sbjct: 115 IAGYTAQCVVHMVCVAIEYC------LRYGQLGGSPIPVDEESGSGSASSSSSDDDREHG 168
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
R+ S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL ++FLAFDV
Sbjct: 169 SHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIIFLAFDV 228
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLG 279
FF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +PKY+F EK
Sbjct: 229 FFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRKMEEPEKQS 288
Query: 280 VG-----AGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
VG G M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH C
Sbjct: 289 VGVPGSSGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVC 345
Query: 335 IVKWLKMNATCPLCKYNILK-----GNEQV 359
I KWL +NATCPLCKYN+ K G+E+V
Sbjct: 346 IDKWLHINATCPLCKYNVRKNSSSSGSEEV 375
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 205/316 (64%), Gaps = 22/316 (6%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+ VRETAA ++EER+++W YSKPV+ LD++WN AFV V+ + + E P +R WI
Sbjct: 7 SVRVRETAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWI 66
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTS 169
GY LQCL+H+ V EYRRR + R D + S DG + S
Sbjct: 67 VGYNLQCLIHIACVIAEYRRRESNRDLDSGLS----------SVQGSSDGYGAEIESGNS 116
Query: 170 FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
K ES N + SF+WW++GFYWV + + L Q++P+LYWL V FLAFDV F + CV +A
Sbjct: 117 VAKPIESTNAIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVA 176
Query: 230 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIE 289
CLIGIA+CCCLPCIIA+LYA+A +EGAS+ ++ LPK++F N EK+ G++ E
Sbjct: 177 CLIGIAVCCCLPCIIAVLYALADREGASDEEIEKLPKFKFLTVRNSEKVN---GEIR--E 231
Query: 290 TNGGYVA-------NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN 342
T GG + +ER+L ++AECCICL YEDGTEL L C HHFH CI KWL++N
Sbjct: 232 TRGGIMTQLGVDSPSERVLSSDEAECCICLCDYEDGTELRELSCRHHFHEACIDKWLRIN 291
Query: 343 ATCPLCKYNILKGNEQ 358
ATCPLCK+NILK EQ
Sbjct: 292 ATCPLCKFNILKTGEQ 307
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/325 (54%), Positives = 229/325 (70%), Gaps = 18/325 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++V+A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS----EDEEEDGIVYRT 164
I GYA+QC++H+V V +EYR R+ +R M ++ R + S ED E+ R
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHGQR-GGPSMAADEERGSDGSSSSTDEDAGENVTHGRI 172
Query: 165 STRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIF 224
S K ES NTM SF+WWI+GFYWV +GG++L++ AP+LYWL +VFLAFDVFF +F
Sbjct: 173 GDCVSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVF 232
Query: 225 CVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LG 279
CV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F N EK G
Sbjct: 233 CVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRINEPEKQSVSMTG 292
Query: 280 VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWL 339
G M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH CI KWL
Sbjct: 293 SSGGMMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWL 349
Query: 340 KMNATCPLCKYNILK-----GNEQV 359
+NATCPLCK N+ K G+E+V
Sbjct: 350 HINATCPLCKLNVRKNSSSSGSEEV 374
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/321 (54%), Positives = 226/321 (70%), Gaps = 30/321 (9%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++V+A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYA+QC++H+V V +EYR R+ +R GG + DEE + +
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHGQR------GGPSM------AADEERG-----SDGSS 156
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG++L++ AP+LYWL +VFLAFDVFF +FCV L
Sbjct: 157 SIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVAL 216
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGVGAG 283
AC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F N EK G G
Sbjct: 217 ACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSSGG 276
Query: 284 KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH CI KWL +NA
Sbjct: 277 MMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHINA 333
Query: 344 TCPLCKYNILK-----GNEQV 359
TCPLCK N+ K G+E+V
Sbjct: 334 TCPLCKLNVRKNSSSSGSEEV 354
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 175/325 (53%), Positives = 221/325 (68%), Gaps = 20/325 (6%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L+++ +E PST +RLW
Sbjct: 4 PSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRD----DEMGGEDFRDVNNDSEDEEEDGIVYRT 164
I GY LQC++H+V V +EY+RR RR+ + GG +++ S +E D I YR
Sbjct: 64 IIGYGLQCVLHMVCVCVEYKRR--RRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRV 121
Query: 165 STR------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFD 218
R TS K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL +VFLAFD
Sbjct: 122 EVRNRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFD 181
Query: 219 VFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKL 278
VFF + CV +AC+IGIA+CCCLPCIIAILY VA QEGA++ ++ LPKY+F EKL
Sbjct: 182 VFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKL 241
Query: 279 G-----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHST 333
G M +T+ E ++ EDAECCICLS+YED TEL LPC H FH T
Sbjct: 242 NGEIQESFGGIMTECDTD---TPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCT 298
Query: 334 CIVKWLKMNATCPLCKYNILKGNEQ 358
CI KWL +NATCPLCK NILK Q
Sbjct: 299 CIDKWLYINATCPLCKLNILKNASQ 323
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 218/324 (67%), Gaps = 21/324 (6%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV V+ +LI++ E PS +RLW
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR- 167
I GY LQC++H+V V +EYRRR RR R G D N S D Y T +
Sbjct: 122 IVGYGLQCVLHMVCVCVEYRRRRRRRRRVGFGIGSD----GNLSSGSRGDSGEYVTLAQL 177
Query: 168 ------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF 221
+S K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF
Sbjct: 178 EDHDGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFF 237
Query: 222 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVG 281
+FCV LAC+IGIA+CCCLPCIIAILYAVA QEGAS+ D+ L K++F +NDEKL
Sbjct: 238 VVFCVALACIIGIAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFKFRRVDNDEKLTGN 297
Query: 282 AGKMVPIETNGGYVAN-------ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
+ P+ GG + E IL EDAECCICLS+Y+DG EL LPC HHFH C
Sbjct: 298 GDEQGPL---GGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCAC 354
Query: 335 IVKWLKMNATCPLCKYNILKGNEQ 358
+ KWL +NATCPLCKYNILK + +
Sbjct: 355 VDKWLYINATCPLCKYNILKSSSR 378
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 216/307 (70%), Gaps = 7/307 (2%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 84 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 143
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY +QC +H+ V +EYRRR RR +D GG N+ S+ + +
Sbjct: 144 VVGYGIQCWLHMACVCVEYRRRRRRRHPEDG-GGSGL--TNSSSQQYVSLAQLEDRGETS 200
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
+ K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF +FCV L
Sbjct: 201 NPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVAL 260
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPI 288
AC+IG+A+CCCLPCIIAILYAVA QEGAS+ D+ +PK+RF N EKL +GK I
Sbjct: 261 ACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKL---SGKARGI 317
Query: 289 ETNGGYVAN-ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
T G + ER L PEDAECCICL YEDG EL LPCNHHFH TCI KWL +N+ CPL
Sbjct: 318 MTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPL 377
Query: 348 CKYNILK 354
CK+NILK
Sbjct: 378 CKFNILK 384
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/344 (52%), Positives = 234/344 (68%), Gaps = 21/344 (6%)
Query: 28 NAARPATL---ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
NA R +L A LL R+ R PSMLVRE AA LEER+ADW YS+PVVALD++WN
Sbjct: 32 NALRRPSLRGAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPVVALDLLWNI 91
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR----VRDDE 139
+F+ V+A +L+++ NE +R W+ GYALQC+VH+V V +EYR R ++R V DE
Sbjct: 92 SFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVPADE 151
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDL 199
G D ++ ED E+ + R + S K ES NTM SF+WWI+GFYW+ +GG+
Sbjct: 152 ERGSDV-SSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGGEE 210
Query: 200 LLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEA 259
+++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE
Sbjct: 211 VIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASED 270
Query: 260 DLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN-------ERILLPEDAECCICL 312
D+ +PKY+F + EK GA E++GG + E+ L EDAECCIC+
Sbjct: 271 DIRQIPKYKFRRVDEPEKDSAGA-----TESSGGIMTECGTNQPIEKALAAEDAECCICI 325
Query: 313 SSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
S+Y+DG EL LPC HHFH CI KWL +NATCPLCK++I KG
Sbjct: 326 SAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKFSIRKGG 369
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 225/330 (68%), Gaps = 28/330 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD +WN AF++VSA +L+++ +E PS +R W
Sbjct: 55 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 114
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF---------RDVNNDSEDEEEDG 159
I GY QC+VH+V V +EYR +R ++GG ++ S+D+ E G
Sbjct: 115 IAGYTAQCVVHMVCVAIEYR------LRYGQLGGSPIPVDEESGSGSASSSSSDDDREHG 168
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
R+ S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDV
Sbjct: 169 SHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDV 228
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLG 279
FF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +PKY+F EK
Sbjct: 229 FFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRKMEEPEKQS 288
Query: 280 VG-----AGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
VG G M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH C
Sbjct: 289 VGVPGSSGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVC 345
Query: 335 IVKWLKMNATCPLCKYNILK-----GNEQV 359
I KWL +NATCPLCKYN+ K G+E+V
Sbjct: 346 IDKWLHINATCPLCKYNVRKNSSSSGSEEV 375
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/323 (49%), Positives = 213/323 (65%), Gaps = 21/323 (6%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+ VRE AA ++EER+++W YSKPV+ LD++WN AFV V+ A+L + +E P +R WI
Sbjct: 60 SVRVRENAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWI 119
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE-----EEDGIVYRT 164
GY LQCL HV V EYRRR+ R+ D+ ED ++ S ++ IV +
Sbjct: 120 IGYNLQCLFHVGCVIAEYRRRHRRQ--SDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDS 177
Query: 165 STR--TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFA 222
TS K ES N + SF+WWI+GFYWV + + L Q++P+LYWL V FLAFDV F
Sbjct: 178 QIEPGTSLAKHLESANAIFSFVWWIIGFYWVTADSEELSQSSPQLYWLCVAFLAFDVIFV 237
Query: 223 IFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGA 282
+ CV +ACLIGIA+CCCLPCIIA+LYA+A + GAS+ ++ LPK++F N EK+
Sbjct: 238 VLCVAVACLIGIAVCCCLPCIIAVLYALADRGGASDEEIERLPKFKFLTVRNSEKVN--- 294
Query: 283 GKMVPIETNGGYVAN-------ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
G++ ET+GG + ER+L ++AECCICL YEDGTEL + C HHFH CI
Sbjct: 295 GEIR--ETHGGIMTQLGVDSPTERVLSSDEAECCICLCDYEDGTELREMSCRHHFHEACI 352
Query: 336 VKWLKMNATCPLCKYNILKGNEQ 358
KWL++NATCPLCK+NILK E+
Sbjct: 353 DKWLRINATCPLCKFNILKTGER 375
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 225/330 (68%), Gaps = 28/330 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD +WN AF++VSA +L+++ +E PS +R W
Sbjct: 4 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF---------RDVNNDSEDEEEDG 159
I GY QC+VH+V V +EYR +R ++GG ++ S+D+ E G
Sbjct: 64 IAGYTAQCVVHMVCVAIEYR------LRYGQLGGSPIPVDEESGSGSASSSSSDDDREHG 117
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
R+ S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDV
Sbjct: 118 SHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDV 177
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLG 279
FF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +PKY+F EK
Sbjct: 178 FFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRKMEEPEKQS 237
Query: 280 VG-----AGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
VG G M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH C
Sbjct: 238 VGVPGSSGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVC 294
Query: 335 IVKWLKMNATCPLCKYNILK-----GNEQV 359
I KWL +NATCPLCKYN+ K G+E+V
Sbjct: 295 IDKWLHINATCPLCKYNVRKNSSSSGSEEV 324
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/324 (53%), Positives = 218/324 (67%), Gaps = 16/324 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD++WN AF++V+AA+L ++ E PS +RLW
Sbjct: 59 PSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAFILVAAAVLALSREESPSMPLRLW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS---EDEEEDGIVYRTS 165
I GYA+QC++H+ V +EYR R + E+ + S ED E R
Sbjct: 119 IVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEETGTDGSSSSSDEDAGERAPRGRNG 178
Query: 166 TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFC 225
K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +VFLAFDVFF +FC
Sbjct: 179 DYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFC 238
Query: 226 VVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGV 280
V LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK G
Sbjct: 239 VALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGS 298
Query: 281 GAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK 340
G M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH CI KWL
Sbjct: 299 SGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLH 355
Query: 341 MNATCPLCKYNILK-----GNEQV 359
+NATCPLCK+N+ K G+E+V
Sbjct: 356 INATCPLCKFNVRKNSSSSGSEEV 379
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 214/330 (64%), Gaps = 19/330 (5%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ R PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L
Sbjct: 42 ARFLRRASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVL 101
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
+++ +E PST +RLWI GY LQC++H+V V +EY+RR RR+ +
Sbjct: 102 VMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRR--RRLVSSGA-------LERSGG 152
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ S K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL +V
Sbjct: 153 WGSGHLSSSSGNFSCSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIV 212
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQN 273
FLAFDVFF + CV +AC+IGIA+CCCLPCIIAILY VA QEGA++ ++ LPKY+F
Sbjct: 213 FLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIG 272
Query: 274 NDEKLG-----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNH 328
EKL G M +T+ E ++ EDAECCICLS+YED TEL LPC H
Sbjct: 273 ESEKLNGEIQESFGGIMTECDTD---TPMEHVIPQEDAECCICLSAYEDETELRELPCRH 329
Query: 329 HFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
FH TCI KWL +NATCPLCK NILK Q
Sbjct: 330 RFHCTCIDKWLYINATCPLCKLNILKNASQ 359
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/327 (53%), Positives = 226/327 (69%), Gaps = 36/327 (11%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++V+A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYA+QC++H+V V +EYR R+ +R GG + DEE + +
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHGQR------GGPSM------AADEERG-----SDGSS 156
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG++L++ AP+LYWL +VFLAFDVFF +FCV L
Sbjct: 157 SIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVAL 216
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ------EGASEADLSILPKYRFEVQNNDEK----- 277
AC+IGIA+CCCLPCIIAILYAV+ Q EGASE D+ +P+Y+F N EK
Sbjct: 217 ACIIGIAVCCCLPCIIAILYAVSDQVWLLTYEGASEDDIRQIPRYKFRRINEPEKQSVSM 276
Query: 278 LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVK 337
G G M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH CI K
Sbjct: 277 TGSSGGMMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDK 333
Query: 338 WLKMNATCPLCKYNILK-----GNEQV 359
WL +NATCPLCK N+ K G+E+V
Sbjct: 334 WLHINATCPLCKLNVRKNSSSSGSEEV 360
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/344 (52%), Positives = 233/344 (67%), Gaps = 21/344 (6%)
Query: 28 NAARPATL---ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
NA R +L A LL R+ R PSMLVRE AA LEER+ADW YS+PVVALD++WN
Sbjct: 32 NALRRPSLRGAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPVVALDLLWNI 91
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR----VRDDE 139
+F+ V+A +L+++ NE +R W+ GYALQC+VH+V V +EYR R ++R V DE
Sbjct: 92 SFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVPADE 151
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDL 199
G D ++D + E+ + R + S K ES NTM SF+WWI+GFYW+ +GG+
Sbjct: 152 ERGSDVSSSSSDED-ASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGGEE 210
Query: 200 LLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEA 259
+++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE
Sbjct: 211 VIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASED 270
Query: 260 DLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN-------ERILLPEDAECCICL 312
D+ +PKY+F + EK A E++GG + E+ L EDAECCIC+
Sbjct: 271 DIRQIPKYKFRRVDEPEKDSADA-----TESSGGIMTECGTNQPIEKALAAEDAECCICI 325
Query: 313 SSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
S+Y+DG EL LPC HHFH CI KWL +NATCPLCK++I KG
Sbjct: 326 SAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKFSIRKGG 369
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/340 (50%), Positives = 217/340 (63%), Gaps = 22/340 (6%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +A+GR PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV+V+ +L
Sbjct: 44 AQFLRQASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVL 103
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN-----TRRVRDDEMGGEDFRDV 148
+++ +E P +RLWI GYA+QC++H+V V +EYRRR D +G
Sbjct: 104 VLSASEAPGMPLRLWIVGYAMQCVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSSSGNLS 163
Query: 149 NNDSEDEEEDGIVYRT-------STRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLL 201
+ E + TS K ES NTM SF+WWI+GFYWV +GG L
Sbjct: 164 VSSREGSASASASAQNVLLGQLDDESTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALA 223
Query: 202 QAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADL 261
Q +P+LYWL ++FL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAV QEGAS+ D+
Sbjct: 224 QDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVTDQEGASKEDI 283
Query: 262 SILPKYRFEVQNNDEKL-----GVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYE 316
L K++F ++EKL G G M + + E L EDAECCICLSSY+
Sbjct: 284 EQLSKFKFRRIESNEKLTGTIQGPVGGIMTECQADSPI---EHALAEEDAECCICLSSYD 340
Query: 317 DGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
DG EL LPC HHFH C+ KWL +NATCPLCKYNILK +
Sbjct: 341 DGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSS 380
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/322 (52%), Positives = 219/322 (68%), Gaps = 18/322 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ +E +R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE--------EEDGI 160
+ GYALQC+VH++ V +EYR R+ +R + G DV S+ E +
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQR--GSAVAGAAPADVERGSDASSSSSDEDDRELDL 176
Query: 161 VYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
R + S K ES NTM SF+WWI+GFYW+ +GG+ ++Q AP+LYWL +VFLAFDVF
Sbjct: 177 HGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVF 236
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK--- 277
F +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK
Sbjct: 237 FVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQDV 296
Query: 278 --LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
+G G M+ TN E++L EDAECCICLS+Y+D EL LPC HHFH TCI
Sbjct: 297 DPMGPFGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDSAELRELPCGHHFHCTCI 353
Query: 336 VKWLKMNATCPLCKYNILKGNE 357
KWL +NATCPLCKYNI K +
Sbjct: 354 DKWLHINATCPLCKYNIRKKQQ 375
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/319 (52%), Positives = 218/319 (68%), Gaps = 18/319 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ +E +R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE--------EEDGI 160
+ GYALQC+VH++ V +EYR R+ +R + G DV S+ E +
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQR--GSAVAGAAPADVERGSDASSSSSDEDDRELDL 176
Query: 161 VYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
R + S K ES NTM SF+WWI+GFYW+ +GG+ ++Q AP+LYWL +VFLAFDVF
Sbjct: 177 HGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVF 236
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK--- 277
F +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK
Sbjct: 237 FVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQDV 296
Query: 278 --LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
+G G M+ TN E++L EDAECCICLS+Y+D EL LPC HHFH TCI
Sbjct: 297 DPMGPFGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDSAELRELPCGHHFHCTCI 353
Query: 336 VKWLKMNATCPLCKYNILK 354
KWL +NATCPLCKYNI K
Sbjct: 354 DKWLHINATCPLCKYNIRK 372
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/332 (53%), Positives = 227/332 (68%), Gaps = 15/332 (4%)
Query: 36 ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
A LL R R PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+
Sbjct: 45 AQLLRRGGRRAMREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLV 104
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR-----VRDDEMGGEDFRDVN 149
++ +E +R W+ GYALQC++H+V V +EYR R+ +R DE G D +
Sbjct: 105 LSRDEDSPMPLRTWVAGYALQCVIHMVCVAIEYRMRHGQRGGAGAAPADEERGSDGSSSS 164
Query: 150 NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
+D +D E D RT S K ES NTM SF+WWI+GFYW+ +GG+ +++ AP+LYW
Sbjct: 165 SDEDDRELDRHGRRTDY-ASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYW 223
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF 269
L +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F
Sbjct: 224 LCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKF 283
Query: 270 EVQNNDEK-----LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
+ EK +G G M TN E++L EDAECCICLS+Y+DG EL L
Sbjct: 284 RRTDEPEKQDVDPMGPFGGIMTECGTNQPI---EKVLAAEDAECCICLSAYDDGAELREL 340
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
PC HHFH TCI KWL +NATCPLCKYNI K N
Sbjct: 341 PCGHHFHCTCIDKWLHINATCPLCKYNIRKSN 372
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/373 (51%), Positives = 236/373 (63%), Gaps = 43/373 (11%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACL 231
K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACV 223
Query: 232 IGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVG-----AGKMV 286
IGIA+CCCLPCIIAILYAV QEGASE D++ L K++F+ ++ +KL G G M
Sbjct: 224 IGIAVCCCLPCIIAILYAVTDQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMT 283
Query: 287 PIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCP 346
TN E IL EDAECCICL YEDG EL LPCNHHFH +CI KWL +NATCP
Sbjct: 284 ECGTNPPV---EHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCP 340
Query: 347 LCKYNILKGNEQV 359
LCK++I+K N +
Sbjct: 341 LCKFDIIKSNRDI 353
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/313 (57%), Positives = 214/313 (68%), Gaps = 23/313 (7%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R W
Sbjct: 59 PSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVLAASLTERPAVPLRFW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY LQCL+HV+ V +EY+RR R+ GG +D+ DG +
Sbjct: 119 LAGYVLQCLLHVLCVAVEYKRR----CREARSGGAGV------DQDDAGDG-----DLKI 163
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG L Q AP+LYWL++VFLAFDVFF +FCV L
Sbjct: 164 SIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVAL 223
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVG-----AG 283
AC+IGIA+CCCLPCIIAILYAV QEGASE D++ L KY+F +KL G G
Sbjct: 224 ACVIGIAVCCCLPCIIAILYAVTDQEGASEEDINNLSKYKFRTMGEADKLVAGIAAPVGG 283
Query: 284 KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
M TN E IL EDAECCICL YEDGTEL LPCNHHFH TCI KWL +NA
Sbjct: 284 VMTECGTNPPV---EHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCIDKWLHINA 340
Query: 344 TCPLCKYNILKGN 356
TCPLCK+NI+KGN
Sbjct: 341 TCPLCKFNIVKGN 353
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 221/317 (69%), Gaps = 17/317 (5%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+LVRETA +L+ER++DW YS+PVV LD++WN AFV V+ +L+I+ +E+P T +R+W+
Sbjct: 5 SILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWV 64
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTS 169
GYALQC++H+ V EYRRR RR M ED D D EE + S+
Sbjct: 65 LGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEKHSLLTGSSFFP 124
Query: 170 F---TKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
F KR ES NTM SF+WW+VGFYW+ +G + L+Q++PR+YWL +VFLAFDVFF +FCV
Sbjct: 125 FCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCV 184
Query: 227 VLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN----------DE 276
LAC+IGIA+CCCLPCIIAILYAV QEGASE D+S+LP +F+ N ++
Sbjct: 185 ALACMIGIAVCCCLPCIIAILYAVVDQEGASEEDISVLPTLKFKRVRNPSCSSTKPDEED 244
Query: 277 KLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIV 336
K + AG ++ +R+L EDAECCICLSSYED EL LPCNHHFH +CIV
Sbjct: 245 KAALPAGGVM----CSSESLFQRMLSAEDAECCICLSSYEDDAELRELPCNHHFHGSCIV 300
Query: 337 KWLKMNATCPLCKYNIL 353
KWL++NATCPLCKYNI+
Sbjct: 301 KWLRINATCPLCKYNII 317
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 222/335 (66%), Gaps = 37/335 (11%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV V+ A+L+++ NE P +R+W
Sbjct: 4 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRNEHPIMPLRVW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR---------------------VRDDEMGGEDFRD 147
+ GYALQC++H+V V +EYRRRN RR + +D +G
Sbjct: 64 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTPRSRSSSSSSSSSSLEEDALG------ 117
Query: 148 VNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRL 207
+ + E++ + + + +S K ES NTM SF+WWI+GFYWV +GG L Q +PR+
Sbjct: 118 -SRRNSGEQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRI 176
Query: 208 YWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKY 267
YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L K+
Sbjct: 177 YWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKF 236
Query: 268 RFEV------QNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTEL 321
+F DE G G M T+ E LL EDAECCICLS+YEDGTEL
Sbjct: 237 KFRKVGDANRHTGDEAQGTTEGIMTECGTDSPI---EHTLLQEDAECCICLSAYEDGTEL 293
Query: 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
LPC HHFH +C+ KWL +NATCPLCKYNILK +
Sbjct: 294 RELPCGHHFHCSCVDKWLYINATCPLCKYNILKSS 328
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 222/344 (64%), Gaps = 36/344 (10%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD++WN AF++V+AA+L ++ E PS +RLW
Sbjct: 59 PSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAFILVAAAVLALSREESPSMPLRLW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR-----VRDDEM-------------GGEDFRDVNN 150
I GYA+QC++H+ V +EYR R + D+E G R N
Sbjct: 119 IVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEETGTDGSSSSSDEDAGERAPRGRNG 178
Query: 151 DSEDEEEDGIVYRTS-----TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
D I Y + + S K ES NTM SF+WWI+GFYWV +GG +L AP
Sbjct: 179 DYVRSVGHHIFYPDNFSVHKSACSIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAP 238
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILP 265
+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P
Sbjct: 239 QLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIP 298
Query: 266 KYRFEVQNNDEK-----LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTE 320
+Y+F + EK G G M+ TN E++L EDAECCICLS+Y+DG E
Sbjct: 299 RYKFRRMDEPEKQSVNMTGSSGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAE 355
Query: 321 LHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK-----GNEQV 359
L LPC HHFH CI KWL +NATCPLCK+N+ K G+E+V
Sbjct: 356 LRELPCGHHFHCVCIDKWLHINATCPLCKFNVRKNSSSSGSEEV 399
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 225/341 (65%), Gaps = 19/341 (5%)
Query: 38 LLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLII 95
L +A+GR PS++VRE AA +LEER++DW YSKPVV LDI+WN AFVIV+ L +
Sbjct: 47 FLRQASGRRTMREPSVVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALFL 106
Query: 96 TINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD--DEMGGEDFRDVNNDSE 153
+ NE P +RLWI GY LQC++H+V V EYRRR + + + G D N S
Sbjct: 107 SRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGSDRIGSGNFSS 166
Query: 154 DEEEDGIVYRTS---------TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAA 204
E V +S TS K ES NTM SF+WWI+GFYWV +GG L Q +
Sbjct: 167 REGSRSAVSGSSYVSLAQFDEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDS 226
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P+LYWL +VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L
Sbjct: 227 PQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIALLYAVADQEGASKEDIEQL 286
Query: 265 PKYRF-EVQNNDEKLGVGAGKMVPIETNGGYVAN-ERILLPEDAECCICLSSYEDGTELH 322
K++F +V++N+++ G + I T + E +L EDAECCICLSSY+DG EL
Sbjct: 287 SKFKFRKVESNEKQTDNNQGPVGGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELR 346
Query: 323 ALPCNHHFHSTCIVKWLKMNATCPLCKYNILK----GNEQV 359
LPC HHFH C+ KWL +NATCPLCKYNILK G E+V
Sbjct: 347 ELPCGHHFHCACVDKWLYINATCPLCKYNILKSSNLGQEEV 387
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/320 (53%), Positives = 223/320 (69%), Gaps = 23/320 (7%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+LVRETA +L+ER++DW YS+PVV LD++WN AFV V+ +L+I+ +E+P T +R+W+
Sbjct: 5 SILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWV 64
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTS 169
GYALQC++H+ V EYRRR RR M ED D D EE +R T +S
Sbjct: 65 LGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEK---HRLLTGSS 121
Query: 170 F------TKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAI 223
F KR ES NTM SF+WW+VGFYW+ +G + L+Q++PR+YWL +VFLAFDVFF +
Sbjct: 122 FFPFCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVV 181
Query: 224 FCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFE----------VQN 273
FCV LAC+IGIA+CCCLPCIIAILYAV QEGASE D+S+LP +F+ +
Sbjct: 182 FCVALACMIGIAVCCCLPCIIAILYAVVDQEGASEEDISVLPTLKFKRVKSPSCSSTKPD 241
Query: 274 NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHST 333
++K + AG ++ +R+L EDAECCICLSSYED EL LPCNHHFH +
Sbjct: 242 EEDKAALPAGGVM----CSSESLFQRMLSAEDAECCICLSSYEDDAELRELPCNHHFHGS 297
Query: 334 CIVKWLKMNATCPLCKYNIL 353
CIVKWL++NATCPLCKYNI+
Sbjct: 298 CIVKWLRINATCPLCKYNII 317
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 227/352 (64%), Gaps = 41/352 (11%)
Query: 36 ALLLGRAT-GR-GHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ GR PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV V+ A+L
Sbjct: 60 ARFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAIL 119
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR------------------- 134
+++ E P +R+W+ GYALQC++H+V V +EYRRRN RR
Sbjct: 120 VMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSS 179
Query: 135 ----VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGF 190
+ ++ +G V + S + + + +S K ES NTM SF+WWI+GF
Sbjct: 180 SSSSLEEEALGSRRNSGVQDLS-------LGHLDTESSSVAKHLESANTMFSFIWWIIGF 232
Query: 191 YWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
YWV +GG L Q +PR+YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAV
Sbjct: 233 YWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAV 292
Query: 251 AGQEGASEADLSILPKYRF------EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPE 304
A QEGAS+ D+ L K++F NDE G G M T+ E LL E
Sbjct: 293 ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPI---EHTLLQE 349
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
DAECCICLS+YEDGTEL LPC HHFH +C+ KWL +NATCPLCKYNILK +
Sbjct: 350 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSS 401
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/333 (53%), Positives = 232/333 (69%), Gaps = 18/333 (5%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +ATGR PSMLVR+TAA +LEER++DW YS+PVV LD+MWN AFV+V+ A+L
Sbjct: 37 ARYLRQATGRRPMREPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAVAVL 96
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
+ + ERP T +R+WI GYA+QCLVH+V V EYRRR R +R E+ +
Sbjct: 97 VNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVGHLSAGS 156
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ E D + S +KR ES NTM SF+WW++GFYW+ +GG L Q +PRLYWL+VV
Sbjct: 157 ESEIDMEAH------SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQN 273
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA QEGASE D++++P+++F
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEEDINLIPRFKFRRSG 270
Query: 274 NDEKLGVGAGKMVPIETNGGYVA--------NERILLPEDAECCICLSSYEDGTELHALP 325
+ + + P + GG +A +ER L EDAECCICLS Y+DG EL LP
Sbjct: 271 SIDTCIIEKADKAP--SLGGIMALVGSSDPSSERGLSSEDAECCICLSPYDDGVELRELP 328
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
CNHHFH +CI KWL++NATCPLCK+NI+ + +
Sbjct: 329 CNHHFHCSCIDKWLRINATCPLCKFNIIHNSSE 361
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/314 (53%), Positives = 214/314 (68%), Gaps = 11/314 (3%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ E +R W
Sbjct: 4 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRGEDSPMPLRTW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE---EEDGIVYRTS 165
+ GYALQC+VH+V V +EYR R +R R E+ + S + ED +
Sbjct: 64 VAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCT 123
Query: 166 TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFC 225
S K ES NTM SF+WWI+GFYW+ +GG+ +++ AP+LYWL +VFLAFDVFF +FC
Sbjct: 124 DCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFC 183
Query: 226 VVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGV 280
V LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK G
Sbjct: 184 VALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQTADETGP 243
Query: 281 GAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK 340
G M TN E++L PEDAECCICLS+Y+DG EL LPC HHFH CI KWL
Sbjct: 244 FGGIMTECGTNQPI---EKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLH 300
Query: 341 MNATCPLCKYNILK 354
+NATCPLCK+NI K
Sbjct: 301 INATCPLCKFNIRK 314
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/333 (53%), Positives = 232/333 (69%), Gaps = 18/333 (5%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +ATGR PSMLVR+TAA +LEER++DW YS+PVV LD+MWN AFV+V+ A+L
Sbjct: 37 ARYLRQATGRRPMREPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAVAVL 96
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
+ + ERP T +R+WI GYA+QCLVH+V V EYRRR R +R E+ +
Sbjct: 97 VNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVAHLSAGS 156
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ E D + S +KR ES NTM SF+WW++GFYW+ +GG L Q +PRLYWL+VV
Sbjct: 157 ESEIDMEAH------SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQN 273
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA QEGASE D++++P+++F
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEEDINLIPRFKFRRSG 270
Query: 274 NDEKLGVGAGKMVPIETNGGYVA--------NERILLPEDAECCICLSSYEDGTELHALP 325
+ + + P + GG +A +ER L EDAECCICLS Y+DG EL LP
Sbjct: 271 SIDTCIIEKADKAP--SLGGIMALVGSSDPSSERGLSSEDAECCICLSPYDDGVELRELP 328
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
CNHHFH +CI KWL++NATCPLCK+NI+ + +
Sbjct: 329 CNHHFHCSCIDKWLRINATCPLCKFNIIHNSSE 361
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 220/337 (65%), Gaps = 39/337 (11%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV V+ A+L+++ E P +R+W
Sbjct: 4 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR-----------------------VRDDEMGGEDF 145
+ GYALQC++H+V V +EYRRRN RR + ++ +G
Sbjct: 64 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRN 123
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
V + S + + + +S K ES NTM SF+WWI+GFYWV +GG L Q +P
Sbjct: 124 SGVQDLS-------LGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 176
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILP 265
R+YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L
Sbjct: 177 RIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLT 236
Query: 266 KYRF------EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGT 319
K++F NDE G G M T+ E LL EDAECCICLS+YEDGT
Sbjct: 237 KFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPI---EHTLLQEDAECCICLSAYEDGT 293
Query: 320 ELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
EL LPC HHFH +C+ KWL +NATCPLCKYNILK +
Sbjct: 294 ELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSS 330
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/321 (54%), Positives = 221/321 (68%), Gaps = 17/321 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVAVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDE-------MGGEDFRDVNNDSEDEEEDGIV 161
+ GY LQC++H+V V +EYRRRN+RR RD M ED ++ +S+D + +
Sbjct: 109 VIGYGLQCMMHMVCVCVEYRRRNSRRRRDMSPRSSSSSMEEEDGLGLSRNSDDRYLE-LG 167
Query: 162 YRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF 221
+ SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL FDVFF
Sbjct: 168 QLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFF 227
Query: 222 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN------D 275
+FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L K++F + D
Sbjct: 228 VVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDSVKHTVD 287
Query: 276 EKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
E+ G G M T+ E L EDAECCICLS+YED TEL LPC HHFH C+
Sbjct: 288 EEQGDSGGLMTECGTDSPV---EHTLPHEDAECCICLSAYEDETELRELPCGHHFHCGCV 344
Query: 336 VKWLKMNATCPLCKYNILKGN 356
KWL +NATCPLCKYNILK +
Sbjct: 345 DKWLYINATCPLCKYNILKSS 365
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 236/376 (62%), Gaps = 46/376 (12%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACL 231
K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACV 223
Query: 232 IGIALCCCLPCIIAILYAVA---GQEGASEADLSILPKYRFEVQNNDEKLGVG-----AG 283
IGIA+CCCLPCIIAILYAV QEGASE D++ L K++F+ ++ +KL G G
Sbjct: 224 IGIAVCCCLPCIIAILYAVTDQVSQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGG 283
Query: 284 KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
M TN E IL EDAECCICL YEDG EL LPCNHHFH +CI KWL +NA
Sbjct: 284 VMTECGTNPPV---EHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINA 340
Query: 344 TCPLCKYNILKGNEQV 359
TCPLCK++I+K N +
Sbjct: 341 TCPLCKFDIIKSNRDI 356
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 192/374 (51%), Positives = 236/374 (63%), Gaps = 44/374 (11%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACL 231
K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACV 223
Query: 232 IGIALCCCLPCIIAILYAVAG-QEGASEADLSILPKYRFEVQNNDEKLGVG-----AGKM 285
IGIA+CCCLPCIIAILYAV QEGASE D++ L K++F+ ++ +KL G G M
Sbjct: 224 IGIAVCCCLPCIIAILYAVTDQQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVM 283
Query: 286 VPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATC 345
TN E IL EDAECCICL YEDG EL LPCNHHFH +CI KWL +NATC
Sbjct: 284 TECGTNPPV---EHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATC 340
Query: 346 PLCKYNILKGNEQV 359
PLCK++I+K N +
Sbjct: 341 PLCKFDIIKSNRDI 354
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/336 (52%), Positives = 223/336 (66%), Gaps = 20/336 (5%)
Query: 38 LLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLII 95
L RA+GR PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV+V+ A+L++
Sbjct: 46 FLRRASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVL 105
Query: 96 TINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVR-----DDEMGGEDFRDVNN 150
+ +E P +RLWI GYA+QC++H+V V +EYRRR ++ D +G +
Sbjct: 106 SASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVS 165
Query: 151 DSEDEEEDGIVYRTSTR-----TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
E Y + + TS K ES NTM SF+WWI+GFYWV +GG L Q +P
Sbjct: 166 SREGSASGSAQYVSLGQLDDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSP 225
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILP 265
+LYWL ++FL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L
Sbjct: 226 QLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLS 285
Query: 266 KYRFEVQNNDEKL-----GVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTE 320
K++F ++EKL G G M + + E +L EDAECCICLSSY+DG E
Sbjct: 286 KFKFRRIESNEKLTGTIQGPVGGIMTECQADSPI---EHVLAEEDAECCICLSSYDDGVE 342
Query: 321 LHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
L LPC HHFH C+ KWL +NATCPLCKYNILK N
Sbjct: 343 LRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSN 378
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/336 (47%), Positives = 214/336 (63%), Gaps = 15/336 (4%)
Query: 34 TLALLLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSA 90
T A RA+GR PS+ +RE AA E+E R+++W YS+PVVALD+ WN+ F+ + A
Sbjct: 39 TAATFFRRASGRRMMLREPSVRMREAAAAEVEGRQSEWAYSRPVVALDVAWNAVFLAIGA 98
Query: 91 AMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV-- 148
++L ++ +E P +R WI GY LQ +H + V E+ RR RRV G V
Sbjct: 99 SVLALSTDEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRRRVSGTHPGSNVVGHVQW 158
Query: 149 --NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPR 206
+++S++E + S TK E++NTM SF+WWIVGFYWV +GG L + +P+
Sbjct: 159 SFSSESDEEFYPPEQFLEGDGNSITKHIETVNTMLSFIWWIVGFYWVTAGGQSLTRDSPQ 218
Query: 207 LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPK 266
LYWL + FLAFDV + CV +ACLIGIA+CCCLPCI+AILY VA EGA++ ++ LPK
Sbjct: 219 LYWLCITFLAFDVVIVLICVSVACLIGIAVCCCLPCILAILYVVADPEGATKEEIDQLPK 278
Query: 267 YRFEVQNNDEKLG----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELH 322
Y+F + +K G G M E+ A E ++ EDAECCICLS+Y++ EL
Sbjct: 279 YKFRIIKEFKKEGDIEESSRGIMTETESE---TAAEHVIALEDAECCICLSAYDNDAELR 335
Query: 323 ALPCNHHFHSTCIVKWLKMNATCPLCKYNILK-GNE 357
LPCNHHFH TCI KWL +NATCPLCK+NIL+ GN
Sbjct: 336 ELPCNHHFHCTCIDKWLLINATCPLCKFNILRTGNH 371
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/316 (56%), Positives = 214/316 (67%), Gaps = 26/316 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R W
Sbjct: 59 PSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVLAASLTERPAVPLRFW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY LQCL+HV+ V +EY+RR R+ GG +D+ DG +
Sbjct: 119 LAGYVLQCLLHVLCVAVEYKRR----CREARSGGAGV------DQDDAGDG-----DLKI 163
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG L Q AP+LYWL++VFLAFDVFF +FCV L
Sbjct: 164 SIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVAL 223
Query: 229 ACLIGIALCCCLPCIIAILYAVAG---QEGASEADLSILPKYRFEVQNNDEKLGVG---- 281
AC+IGIA+CCCLPCIIAILYAV QEGASE D++ L KY+F +KL G
Sbjct: 224 ACVIGIAVCCCLPCIIAILYAVTDQVCQEGASEEDINNLSKYKFRTMGEADKLVAGIAAP 283
Query: 282 -AGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK 340
G M TN E IL EDAECCICL YEDGTEL LPCNHHFH TCI KWL
Sbjct: 284 VGGVMTECGTNPPV---EHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCIDKWLH 340
Query: 341 MNATCPLCKYNILKGN 356
+NATCPLCK+NI+KGN
Sbjct: 341 INATCPLCKFNIVKGN 356
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 219/343 (63%), Gaps = 37/343 (10%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 83 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 142
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRD--DEMGGEDFRDVNNDSEDEEEDGIVYRTST 166
+ GY +QC +H+ V +EYRRR RR R ++ GG F N+ + +
Sbjct: 143 VVGYGIQCWLHMACVCVEYRRRRRRRHRSSSEDGGGPGF--TNSSQQQYVSLAQLEDRGE 200
Query: 167 RTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
++ K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF +FCV
Sbjct: 201 TSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSGDSPQLYWLCIIFLGFDVFFVVFCV 260
Query: 227 VLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMV 286
LAC+IG+A+CCCLPCIIAILYAVA QEGAS+ D+ +PK+RF NDEKL +GK
Sbjct: 261 ALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKIGNDEKL---SGKAR 317
Query: 287 PIETNGGYVAN-ERILLPEDA-----------------------------ECCICLSSYE 316
I T G + ER L PEDA ECCICL YE
Sbjct: 318 GIMTECGTDSPIERSLSPEDAVHSHFHILMQLYIFKVCRLINSWLLMILKECCICLCEYE 377
Query: 317 DGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
DG EL LPCNHHFH CI KWL +N+ CPLCK+NILK +V
Sbjct: 378 DGVELRELPCNHHFHCACIDKWLHINSRCPLCKFNILKNANEV 420
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 216/337 (64%), Gaps = 36/337 (10%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 84 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 143
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY +QC +H+ V +EYRRR RR +D GG N+ S+ + +
Sbjct: 144 VVGYGIQCWLHMACVCVEYRRRRRRRHPEDG-GGSGL--TNSSSQQYVSLAQLEDRGETS 200
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
+ K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF +FCV L
Sbjct: 201 NPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVAL 260
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPI 288
AC+IG+A+CCCLPCIIAILYAVA QEGAS+ D+ +PK+RF N EKL +GK I
Sbjct: 261 ACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKL---SGKARGI 317
Query: 289 ETNGGYVAN-ERILLPEDA-----------------------------ECCICLSSYEDG 318
T G + ER L PEDA ECCICL YEDG
Sbjct: 318 MTECGTDSPIERSLSPEDAVQSHFHILIKLYILKVCKIDNAWLLMILQECCICLCEYEDG 377
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
EL LPCNHHFH TCI KWL +N+ CPLCK+NILK
Sbjct: 378 VELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILKN 414
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/356 (51%), Positives = 225/356 (63%), Gaps = 41/356 (11%)
Query: 20 PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSMLVRETAARELEERRADWGYS 71
P P+ P+ L L G R TG PS+ VRETAA LEER+ DW YS
Sbjct: 26 PTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAEHLEERQTDWAYS 85
Query: 72 KPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
KPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI GY LQCL+HV+ V +EYRRR
Sbjct: 86 KPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRR- 144
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
RR D E G++ + S K ES NTM SF+WWIVGFY
Sbjct: 145 -RRNADQEGAGDE--------------------DLKLSIVKHLESANTMFSFIWWIVGFY 183
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
WV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV
Sbjct: 184 WVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVT 243
Query: 252 ---GQEGASEADLSILPKYRFEVQNNDEKLGVG-----AGKMVPIETNGGYVANERILLP 303
QEGASE D++ L K++F+ ++ +KL G G M TN E IL
Sbjct: 244 DQVSQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPV---EHILSA 300
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
EDAECCICL YEDG EL LPCNHHFH +CI KWL +NATCPLCK++I+K N +
Sbjct: 301 EDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDIIKSNRDI 356
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/328 (54%), Positives = 222/328 (67%), Gaps = 23/328 (7%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LD++WN AFV+V+AA+L+++ E PS +R W
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGED--FRDVNNDSEDEEEDGIVYRT-- 164
I GYALQC++H+V V +EYRRR R G ED + S + D Y T
Sbjct: 122 IVGYALQCILHIVCVSVEYRRRRRRA---GVFGSEDDGIGSGGSYSSSPQGDSSQYVTLA 178
Query: 165 ----STRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
+ TS K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++FL FDVF
Sbjct: 179 SLGDESSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVF 238
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKL-- 278
F +FCV LAC+IGIA+CCCLPCIIAILYAVA QEGAS+ D+ L +++F + EK+
Sbjct: 239 FVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDG 298
Query: 279 ---GVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
G G M T+ E +L EDAECCICLS+Y+DG EL LPC HHFH TC+
Sbjct: 299 DIQGACGGIMTECGTDA---PTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCV 355
Query: 336 VKWLKMNATCPLCKYNILK----GNEQV 359
KWL +NATCPLCKYNILK G E+V
Sbjct: 356 DKWLYINATCPLCKYNILKSSSNGREEV 383
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/314 (55%), Positives = 210/314 (66%), Gaps = 31/314 (9%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L + E P+ +R+W
Sbjct: 63 PSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASTGESPAVPLRVW 122
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GY LQCL+H++ V +EYRRR +R + G EDF+
Sbjct: 123 IAGYVLQCLLHILCVTVEYRRR-SRDADQEGAGDEDFK---------------------L 160
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV L
Sbjct: 161 SVVKHLESANTMFSFIWWIVGFYWVSAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVAL 220
Query: 229 ACLIGIALCCCLPCIIAILYAVAG-QEGASEADLSILPKYRFEVQNNDEKLGVG-----A 282
AC+IGIA+CCCLPCIIAILYAV QEGASE D++ L K++F ++ +KL G
Sbjct: 221 ACVIGIAVCCCLPCIIAILYAVTDQQEGASEDDINNLSKFKFRTMSDADKLAAGIAAPVG 280
Query: 283 GKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN 342
G M TN E IL EDAECCICL YEDG EL LPCNHHFH +CI KWL +N
Sbjct: 281 GVMTECGTNPPV---EHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHIN 337
Query: 343 ATCPLCKYNILKGN 356
ATCPLCK+NI+K N
Sbjct: 338 ATCPLCKFNIVKSN 351
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/334 (52%), Positives = 223/334 (66%), Gaps = 26/334 (7%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LD++WN AFV+V+AA+L+++ E PS +R W
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR----VRDDEMGG----------EDFRDVNNDSED 154
I GYALQC++H+V V +EYRRR R DD +G + + V + D
Sbjct: 122 IVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVTLANVD 181
Query: 155 EEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVF 214
E S +S K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++F
Sbjct: 182 EHHSQTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIF 241
Query: 215 LAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN 274
L FDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA QEGAS+ D+ L +++F +
Sbjct: 242 LGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGD 301
Query: 275 DEKL-----GVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHH 329
EK+ G G M T+ E +L EDAECCICLS+Y+DG EL LPC HH
Sbjct: 302 IEKIDGDIQGACGGIMTECGTDA---PTEHVLSQEDAECCICLSAYDDGVELRELPCGHH 358
Query: 330 FHSTCIVKWLKMNATCPLCKYNILK----GNEQV 359
FH TC+ KWL +NATCPLCKYNILK G E+V
Sbjct: 359 FHCTCVDKWLYINATCPLCKYNILKSSSNGREEV 392
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 174/320 (54%), Positives = 218/320 (68%), Gaps = 18/320 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LD++WN AFV+V+AA+L+++ E PS +R W
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYALQC++H+V V +EYRRR R G ED + S +S
Sbjct: 122 IVGYALQCILHIVCVSVEYRRRRRRA---GVFGSEDDGIGSGGSYSSS---PQGDSSQYV 175
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
+ K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++FL FDVFF +FCV L
Sbjct: 176 TVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVAL 235
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKL-----GVGAG 283
AC+IGIA+CCCLPCIIAILYAVA QEGAS+ D+ L +++F + EK+ G G
Sbjct: 236 ACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGG 295
Query: 284 KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
M T+ E +L EDAECCICLS+Y+DG EL LPC HHFH TC+ KWL +NA
Sbjct: 296 IMTECGTDA---PTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINA 352
Query: 344 TCPLCKYNILK----GNEQV 359
TCPLCKYNILK G E+V
Sbjct: 353 TCPLCKYNILKSSSNGREEV 372
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/313 (54%), Positives = 217/313 (69%), Gaps = 28/313 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE+AA +LE R++DW YSKPVV LD++WN AFV++S A+L+++ E+ T +R+W
Sbjct: 4 PSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVLLSLAVLVLSRKEKNCTELRIW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYALQC+VH++ V EY RR ++ + + ++
Sbjct: 64 IVGYALQCVVHMLCVCCEYLRRQQQQQQAN-------------------------ANSSL 98
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S+ KR ES NTM SF+WWIVGFYW+ +GG L AP +YWL VVFLAFDVFF +FCV L
Sbjct: 99 SWAKRLESANTMFSFVWWIVGFYWITAGGQSLAVDAPHVYWLCVVFLAFDVFFVVFCVAL 158
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF-EVQNNDEKLGVGAGKMVP 287
AC+IGIA+CCCLPCIIAILYAVA QEGASE D++ LP +F ++ ++ + G +
Sbjct: 159 ACVIGIAVCCCLPCIIAILYAVADQEGASEEDINNLPSAKFRKIYSDGKGKGDTERPLAG 218
Query: 288 IETNGGYVAN--ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATC 345
+ T G AN ER L +DAECCICLSSYEDG EL LPC+HHFHSTCI KWL++NATC
Sbjct: 219 VMTFVGASANLTERSLFEDDAECCICLSSYEDGVELRHLPCSHHFHSTCISKWLRINATC 278
Query: 346 PLCKYNILKGNEQ 358
PLCKYNI+ GN
Sbjct: 279 PLCKYNIVHGNRN 291
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 209/333 (62%), Gaps = 19/333 (5%)
Query: 36 ALLLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAM 92
A +L RA+ R PS+ VRE AA +LEER++DWGYSKPVV +D++W+ A VI++ +
Sbjct: 49 ARILRRASSRRMMLREPSVRVRENAAEQLEERQSDWGYSKPVVVIDVLWSLAIVIIAVGV 108
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRD-VNND 151
L +++ E+P R WI Y L C HVV V +EYR+R +R+ + D D ++
Sbjct: 109 LGLSLEEKPRVPFRAWIVAYILLCSCHVVCVVVEYRKRRNLGLRESGILSSDSGDSLDFS 168
Query: 152 SEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGG-DLLLQAAPRLYWL 210
++ E DG TS KR ES T S +WWI+GFYWV + G + + +P+LYWL
Sbjct: 169 TQQSENDG------QNTSVAKRVESAMTTFSIIWWIIGFYWVTTAGRQNVAKDSPQLYWL 222
Query: 211 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFE 270
+ FLA D F I C+ +ACLIGIA+CC LPCII ILYA+A QEGA++ ++ L KY+F
Sbjct: 223 CIAFLAADTLFVIICIAVACLIGIAVCCFLPCIIGILYAMADQEGATKEEIDRLLKYKFH 282
Query: 271 -----VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+ NDE G M +T+ ER L ED ECCICLS+YEDG+EL LP
Sbjct: 283 RIGNCEKVNDESQESFGGMMTECDTD---TPIERALSREDTECCICLSAYEDGSELRELP 339
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C HHFH CI KWL +NATCPLCK++ILK + Q
Sbjct: 340 CGHHFHCMCIDKWLCINATCPLCKFDILKADSQ 372
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 150/179 (83%)
Query: 180 MASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 239
M SFLWWI+GFYWVVSGGD+L Q APRLYWL+VVFLAFDVFFA+FCV +AC IGIALCCC
Sbjct: 1 MVSFLWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCC 60
Query: 240 LPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANER 299
LPC+IAILYA+AGQEGAS+AD+ LP+YR+ + D + G G M+P+ N G +ER
Sbjct: 61 LPCVIAILYALAGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSER 120
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
ILL EDAECCICLSSYEDG EL ALPCNHHFH TCI KWL+M+ATCPLCKYNILKG+E
Sbjct: 121 ILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSES 179
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 220/326 (67%), Gaps = 19/326 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR- 167
I GY LQC++H+V V +EYRRRN+RR RD ++ S DEEE + R S
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 168 -----------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLA 216
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLG 228
Query: 217 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN-- 274
FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L K++F +
Sbjct: 229 FDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTM 288
Query: 275 ----DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
DE+ G G V E G E L EDAECCICLS+YED TEL LPC HHF
Sbjct: 289 KHTVDEEQGQGDSGGVMTEC-GTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHF 347
Query: 331 HSTCIVKWLKMNATCPLCKYNILKGN 356
H C+ KWL +NATCPLCKYNILK +
Sbjct: 348 HCGCVDKWLYINATCPLCKYNILKSS 373
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 220/326 (67%), Gaps = 19/326 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR- 167
I GY LQC++H+V V +EYRRRN+RR RD ++ S DEEE + R S
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 168 -----------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLA 216
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLG 228
Query: 217 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN-- 274
FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L K++F +
Sbjct: 229 FDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTM 288
Query: 275 ----DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
DE+ G G V E G E L EDAECCICLS+YED TEL LPC HHF
Sbjct: 289 KHTVDEEQGEGDSGGVMTEC-GTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHF 347
Query: 331 HSTCIVKWLKMNATCPLCKYNILKGN 356
H C+ KWL +NATCPLCKYNILK +
Sbjct: 348 HCGCVDKWLYINATCPLCKYNILKSS 373
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 219/324 (67%), Gaps = 19/324 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR- 167
I GY LQC++H+V V +EYRRRN+RR RD ++ S DEEE + R S
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 168 -----------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLA 216
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLG 228
Query: 217 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN-- 274
FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L K++F +
Sbjct: 229 FDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTM 288
Query: 275 ----DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
DE+ G G V E G E L EDAECCICLS+YED TEL LPC HHF
Sbjct: 289 KHTVDEEQGQGDSGGVMTEC-GTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHF 347
Query: 331 HSTCIVKWLKMNATCPLCKYNILK 354
H C+ KWL +NATCPLCKYNILK
Sbjct: 348 HCGCVDKWLYINATCPLCKYNILK 371
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/301 (49%), Positives = 190/301 (63%), Gaps = 36/301 (11%)
Query: 65 RADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW 124
R + YS P++ LD++WN AFV+VS +L T ERPST +RLWI GY LQCL+HV V+
Sbjct: 66 RENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVF 125
Query: 125 MEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL 184
EY+R M F D RT+ R S KR ES+NTM S +
Sbjct: 126 FEYQR---------SMAHHGFED---------------RTAHR-SIMKRLESMNTMTSSV 160
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
WW+ GFYW+V GG LLQ +PRLYWL VVFLAFD+FF +FC+ +AC+I +LCCC+P I+
Sbjct: 161 WWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIP-IV 219
Query: 245 AILYAVAGQEGASEADLSILPKYRFE------VQNNDEKLGVGAGKMVPIETNGGYVANE 298
A YA+ +EGASE D+ LPKY F E+ +G+ +E + + E
Sbjct: 220 AFAYAMTTREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGST----VELDNSHRIKE 275
Query: 299 RILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
L PED+ECCICLS YEDGTEL+ LPCNHHFH CI KWL++NATCPLCK NI +G+
Sbjct: 276 LALHPEDSECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTL 335
Query: 359 V 359
V
Sbjct: 336 V 336
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 209/328 (63%), Gaps = 26/328 (7%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A LGR R PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L
Sbjct: 47 ARFLGRTGSRRLMREPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVL 106
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
++ E PS +R+W+ GY LQCL HV+ V +EYRRR R
Sbjct: 107 AASLPESPSVPLRVWLAGYVLQCLFHVLCVTVEYRRRREARG----------------GG 150
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ G + S K ES NTM SF+WWI+GFYW+ +GG L AP+LYWL++V
Sbjct: 151 FGADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQN 273
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV QEGASE D++ L K++F
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQEGASEEDINNLSKFKFRTMG 270
Query: 274 NDEKLGVG-----AGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNH 328
+ +KL G G M TN E L EDAECCICL YEDG EL LPCNH
Sbjct: 271 DADKLVAGIAAPVGGVMTECGTNPPV---EHFLSAEDAECCICLCPYEDGAELRELPCNH 327
Query: 329 HFHSTCIVKWLKMNATCPLCKYNILKGN 356
HFH TCI KWL +NATCPLCK+NI+K N
Sbjct: 328 HFHCTCIDKWLHINATCPLCKFNIIKSN 355
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 209/328 (63%), Gaps = 26/328 (7%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A LGR R PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L
Sbjct: 47 ARFLGRTGSRRLMREPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVL 106
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
++ E PS +R+W+ GY LQCL HV+ V +EYRRR R
Sbjct: 107 AASLPESPSVPLRVWLSGYVLQCLFHVLCVTVEYRRRREARG----------------GG 150
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ G + S K ES NTM SF+WWI+GFYW+ +GG L AP+LYWL++V
Sbjct: 151 FGADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQN 273
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV QEGASE D++ L K++F
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQEGASEEDINNLSKFKFRTMG 270
Query: 274 NDEKLGVG-----AGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNH 328
+ +KL G G M TN E L EDAECCICL YEDG EL LPCNH
Sbjct: 271 DADKLVAGIAAPVGGVMTECGTNPPV---EHFLSAEDAECCICLCPYEDGAELRELPCNH 327
Query: 329 HFHSTCIVKWLKMNATCPLCKYNILKGN 356
HFH TCI KWL +NATCPLCK+NI+K N
Sbjct: 328 HFHCTCIDKWLHINATCPLCKFNIIKSN 355
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 190/296 (64%), Gaps = 41/296 (13%)
Query: 70 YSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRR 129
+SKP+V LD++WN AFV VS +L+ T ERPS +R+WI GYALQCL+HV V ++RR
Sbjct: 71 FSKPIVVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRR 130
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
RN G ED +S KR ES+NTM S +WW+ G
Sbjct: 131 RN---------GNED---------------------RHSSIVKRLESMNTMFSSVWWVFG 160
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 249
F W+++GG +L+Q +PRLYWLAVVFLAFDVFF +FC+ +AC+ AL CC+P + AI YA
Sbjct: 161 FCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYA 219
Query: 250 VAGQEGASEADLSILPKYRF------EVQNNDEKLGVGAGKMVPIETNGGYVANERILLP 303
+ +EGASE D+ +LP+YRF ++D+K + A +E ++ L P
Sbjct: 220 MKIREGASEDDIRLLPRYRFCDASLVRKVDDDKKQALEAA----VELGSSSSISDLALHP 275
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
ED+ECCICLS Y DG EL+ LPCNHHFH CI +WL++NATCPLCK+NIL+G+ V
Sbjct: 276 EDSECCICLSRYVDGAELYILPCNHHFHCGCISRWLRINATCPLCKFNILRGDMLV 331
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 205/331 (61%), Gaps = 37/331 (11%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRE AA +LEER++ WGYSKP+V +D++ N AFVI++ +L +++ E+P +R+W
Sbjct: 5 PSVRVRENAAEQLEERQSGWGYSKPIVLIDVLRNLAFVIIAVGVLGLSLEEKPKVPLRVW 64
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRD---------DEMGGEDFRDVNNDSEDEEEDG 159
I GY LQCL HVV V +EYR+R + D +G R ND ED
Sbjct: 65 IVGYGLQCLCHVVCVVVEYRKRRNLGFEESGILSSGSGDSLGFGTHRS-GNDGED----- 118
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGG-DLLLQAAPRLYWLAVVFLAFD 218
+ KR ES +TM S +WW++GFYWV + G L + +P+LYWL V FLAFD
Sbjct: 119 -------TSRVPKRVESASTMVSVIWWVIGFYWVTAAGRQDLEENSPQLYWLCVTFLAFD 171
Query: 219 VFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG-QEGASEADLSILPKYRFEVQNNDEK 277
F I C ACLIGIA+CCCLPCII ILYA+ QEGA+ ++ LPKY+F EK
Sbjct: 172 ALFVIICAAAACLIGIAVCCCLPCIIGILYAMTDPQEGATAEEIDRLPKYKFCRAEAFEK 231
Query: 278 LG-----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHS 332
+ + G M + + ER + EDAECCICLS+YE+G+EL LPCNHHFH
Sbjct: 232 VDGENPEICGGMMTECDND---TPIERAVSHEDAECCICLSAYENGSELRELPCNHHFHC 288
Query: 333 TCIVKWLKMNATCPLCKYNILK-----GNEQ 358
CI KWL +NATCPLCK+NI+K GNE+
Sbjct: 289 MCIDKWLCINATCPLCKFNIVKAGNRSGNEE 319
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/293 (49%), Positives = 185/293 (63%), Gaps = 36/293 (12%)
Query: 73 PVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT 132
P++ LD++WN AFV+VS +L T ERPST +RLWI GY LQCL+HV V+ EY+R
Sbjct: 2 PILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEYQR--- 58
Query: 133 RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYW 192
M F D RT+ R S KR ES+NTM S +WW+ GFYW
Sbjct: 59 ------SMAHHGFED---------------RTAHR-SIMKRLESMNTMTSSVWWVFGFYW 96
Query: 193 VVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 252
+V GG LLQ +PRLYWL VVFLAFD+FF +FC+ +AC+ +LCCC+P I+A YA+
Sbjct: 97 IVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVXFFSLCCCIP-IVAFAYAMTT 155
Query: 253 QEGASEADLSILPKYRFE------VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
+EGASE D+ LPKY F E+ +G+ +E + + E L PED+
Sbjct: 156 REGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGS----TVELDNSHRIKELALHPEDS 211
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
ECCICLS YEDGTEL+ LPCNHHFH CI KWL++NATCPLCK NI +G+ V
Sbjct: 212 ECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 264
>gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/289 (52%), Positives = 180/289 (62%), Gaps = 54/289 (18%)
Query: 1 MSSSSDAAARSDSHAPLLRPRDPSVSPNA-----ARPATLALLLGRATGRGHGPSMLVRE 55
+ SSSD+ A D HAPLLRPR S ++ ARP LA+LLGR TG PSMLVRE
Sbjct: 564 LMSSSDSTAARDQHAPLLRPRHDGSSSSSSSSSSARPTALAVLLGRITGH-RAPSMLVRE 622
Query: 56 TAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQ 115
TAAR LEERR DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WICGY LQ
Sbjct: 623 TAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICGYGLQ 682
Query: 116 CLVHVVLVWMEYRRRN-TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRC 174
CL+HVVLVW EY RRN TRR RD E G + V D E + ++ YR
Sbjct: 683 CLIHVVLVWSEYWRRNTTRRARDLESGDHEDYSV-YDYEQDSDNSTTYR----------- 730
Query: 175 ESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
L+V+FLA DVFFAIFCVVLACL+GI
Sbjct: 731 -----------------------------------LSVIFLAIDVFFAIFCVVLACLVGI 755
Query: 235 ALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAG 283
ALCCCLPCIIA+LYAVAG EG SEA+L +LP Y+F+ +++EK G G
Sbjct: 756 ALCCCLPCIIALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPG 804
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 209/321 (65%), Gaps = 26/321 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRE AA E+E R+ +W YSKPVVALDI WN +F++VS +L ++ E P +R+W
Sbjct: 53 PSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGLSSEEEPCVPLRVW 112
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR---VRDDEMGGED--------FRDVNNDSEDEEE 157
I GY LQ LVH V V +E+RRR RR + DD+ E+ D + SE E E
Sbjct: 113 ILGYLLQGLVHSVCVVLEFRRR--RRGSYLEDDDSVLENGLRWSFSSESDSDFASEHESE 170
Query: 158 DGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAF 217
+ S K ES NT+ SF+WWI+GFYWV GG L + +P+LYWL + FLAF
Sbjct: 171 EN---------SIIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAF 221
Query: 218 DVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEV--QNND 275
DV + CV +ACLIGIA+CCCLPCI+AILYAVA Q GA+ ++ LPKY+F + ++ +
Sbjct: 222 DVVIVVICVAVACLIGIAVCCCLPCILAILYAVADQ-GATMEEIDQLPKYKFRMIKESKE 280
Query: 276 EKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
E + + V E + A+E ++ EDAECCICLS+Y+DG EL LPCNHHFH TCI
Sbjct: 281 EGDAQESSRGVMTECDND-TASEHVIALEDAECCICLSAYDDGAELRELPCNHHFHCTCI 339
Query: 336 VKWLKMNATCPLCKYNILKGN 356
KWL + ATCPLCK++IL +
Sbjct: 340 DKWLLICATCPLCKFDILSTD 360
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/294 (44%), Positives = 187/294 (63%), Gaps = 33/294 (11%)
Query: 69 GYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYR 128
YS+ V+ LD++WN AFV+ +A +L+ T+ ERP+T +RLW+CGYA +C++H+ V+ E+R
Sbjct: 64 AYSRAVLVLDMVWNLAFVVAAAGVLLSTLRERPATPLRLWLCGYAFECVLHMAFVYFEFR 123
Query: 129 RRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIV 188
R+RD + T S K+ E +NT+AS +WW+
Sbjct: 124 ----TRIRDSF------------------------SHTTYSIVKKLEPMNTLASSVWWVF 155
Query: 189 GFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 248
GFYW+V GG LL+ +P LYWL VVFLAFDVFF IFC+ +AC++ AL C +P IIA+ Y
Sbjct: 156 GFYWIVVGGQALLEDSPHLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAY 214
Query: 249 AVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIET---NGGYVANERILLPED 305
A+ +EGASE D+ LP YRF + N+ + ++V + NG ++ +E L P+D
Sbjct: 215 AMRIREGASEEDIRSLPMYRFSLSNSLVMVDDNKKQLVKVRVDSCNGSHM-SELSLHPDD 273
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+ECCICL Y +G EL+ LPC HHFH CI +WL+ ATCPLCK+NIL+G+ V
Sbjct: 274 SECCICLCPYVEGEELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRGDTLV 327
>gi|118489291|gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 218
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 164/203 (80%), Gaps = 4/203 (1%)
Query: 8 AARSDSHAPLLRPR-DPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRA 66
+ ++ HAPLLRPR DP SP +R TL+ LLGRATGR GPSMLVRETAAREL+ERRA
Sbjct: 2 STENEPHAPLLRPRQDPPTSP-TSRQTTLSALLGRATGR-RGPSMLVRETAARELDERRA 59
Query: 67 DWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWME 126
DWGYSKPVV+LD+MWN+AFV+VS ML++T+ ERP+T IR+WICGYALQCLVHVVLVW+E
Sbjct: 60 DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119
Query: 127 YRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWW 186
YRRRNTRR RD E + + N D+E+D + S R+S TKRCES+NTM SFLWW
Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDDEDDRASF-ISPRSSVTKRCESVNTMVSFLWW 178
Query: 187 IVGFYWVVSGGDLLLQAAPRLYW 209
+VGFYWVVSGGD+LLQ APRLYW
Sbjct: 179 MVGFYWVVSGGDVLLQNAPRLYW 201
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 183/292 (62%), Gaps = 17/292 (5%)
Query: 70 YSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRR 129
+ KP++ LD+ WN FV +S +L+++ E+P+ +R W+ GYA+QCL HV V++ Y R
Sbjct: 71 FIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
R++R +G E N ++DE + + R KR E++NTM +++WW+ G
Sbjct: 131 RSSRY----RLGFE-----NRGAQDE-----LRLSHNRIRVMKRLEALNTMVAYIWWVFG 176
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 249
FYW+V GG LL+ +PRLYWLAVVFLAFDVFF IFC +A + A+CC +P +A Y
Sbjct: 177 FYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYT 235
Query: 250 VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN--ERILLPEDAE 307
+ EGASE ++ LPKYRF N E + V + GY + E L ED+
Sbjct: 236 MNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSA 295
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
CCICL+ Y G +L LPCNHHFH+ CIVKWL++NATCPLCK++I +G+ V
Sbjct: 296 CCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 185/296 (62%), Gaps = 37/296 (12%)
Query: 69 GYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYR 128
YS+ V+ LD++WN AFV+V+A +L+ T+ ERPST +RLW+CGYA +C++H+ V+ E+R
Sbjct: 62 AYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFECVLHMAFVYFEFR 121
Query: 129 RRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIV 188
+RD + T S K+ E +NT+AS +WWI
Sbjct: 122 TG----IRDS------------------------FSHTAYSIVKKLEPMNTLASSVWWIF 153
Query: 189 GFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 248
GFYW+V G LL+ +PRLYWL VVFLAFDVFF IFC+ +AC++ AL C +P IIA+ Y
Sbjct: 154 GFYWIVVGDQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAY 212
Query: 249 AVAGQEGASEADLSILPKYRFEVQN-----NDEKLGVGAGKMVPIETNGGYVANERILLP 303
A+ +EGASE D+ LP YRF N +D K + G+ +++ G + L P
Sbjct: 213 AMRIREGASEEDILSLPMYRFSQSNSLVMVDDNKKQLIKGR---VDSCNGSHMSALSLHP 269
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+D+ECCICL Y +G EL+ LPC HHFH CI +WL+ ATCPLCK+NIL+G+ V
Sbjct: 270 DDSECCICLCPYVEGAELYRLPCTHHFHCECIGRWLQTKATCPLCKFNILRGDTLV 325
>gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/292 (50%), Positives = 173/292 (59%), Gaps = 63/292 (21%)
Query: 8 AARSDSHAPLLRPRDPSVSPNA---ARPATLALLLGRATGRGHGPSMLVRETAARELEER 64
AAR D HAPLLRPR ++ ARP LA+LLGR TG PSMLVRETAAR LEER
Sbjct: 585 AAR-DQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGH-RAPSMLVRETAARALEER 642
Query: 65 RADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW 124
R DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL HVVLVW
Sbjct: 643 RIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVW 702
Query: 125 MEYRRRN-TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF 183
EY RRN TRR RD E + ++ D E + +D
Sbjct: 703 SEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDN------------------------ 738
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
Y L+V+FLA DVFFA+FCVVLACL+GIALCCCLPCI
Sbjct: 739 ---------------------STTYRLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCI 777
Query: 244 IAILYAVAG------------QEGASEADLSILPKYRFEVQNNDEKLGVGAG 283
IA+LYAVAG QEG SEA+L +LP Y+F+ +++EK G G
Sbjct: 778 IALLYAVAGTNLETPFLAGFIQEGVSEAELGVLPLYKFKAFHSNEKNITGPG 829
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 173/274 (63%), Gaps = 41/274 (14%)
Query: 92 MLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNND 151
+L+ T ERPS +R+WI GYALQCL+HV V ++RRRN G ED
Sbjct: 3 VLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRRRN---------GNED------- 46
Query: 152 SEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
+S KR ES+NTM S +WW+ GF W+++GG +L+Q +PRLYWLA
Sbjct: 47 --------------RHSSIVKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRLYWLA 92
Query: 212 VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF-- 269
VVFLAFDVFF +FC+ +AC+ AL CC+P + AI YA+ +EGASE D+ +LP+YRF
Sbjct: 93 VVFLAFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYAMKIREGASEDDIRLLPRYRFCD 151
Query: 270 ----EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
++D+K + A +E ++ L PED+ECCICLS Y DG EL+ LP
Sbjct: 152 ASLVRKVDDDKKQALEAA----VELGSSSSISDLALHPEDSECCICLSRYVDGAELYILP 207
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
CNHHFH CI +WL++NATCPLCK+NIL+G+ V
Sbjct: 208 CNHHFHCGCISRWLRINATCPLCKFNILRGDMLV 241
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/296 (47%), Positives = 185/296 (62%), Gaps = 39/296 (13%)
Query: 70 YSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRR 129
YS+ V+ +D++WN AFV+V+AA+++ T NERPST +RLW+CGYA +CL+HV V+ E
Sbjct: 35 YSRAVLVVDMVWNLAFVVVAAAVILSTFNERPSTPLRLWLCGYAFECLLHVAFVFSE--- 91
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
FR DS + T S K+ E +NT+AS +WW+ G
Sbjct: 92 ---------------FRVTTRDS----------FSHTPYSIAKKLEPMNTLASSVWWVFG 126
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 249
FYW+V GG LL+ +PRLYWL VVFLAFDVFF IFC+ +AC++ AL C +P IIA+ YA
Sbjct: 127 FYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAYA 185
Query: 250 VAGQEGASEADLSILPKYRFEVQN------NDEKLGVGAGKMVPIETNGGYVANERILLP 303
+ +EGASE D+S LP YRF N +++K V A I + +E L P
Sbjct: 186 LRIREGASEDDISSLPMYRFSQSNVMVMVDDNKKQHVKAK----IGSYNPSHISELSLHP 241
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+D+ECCICL Y DGTEL+ LPC HHFH CI +WL+ ATCPLCKYNI + + V
Sbjct: 242 DDSECCICLCPYVDGTELYRLPCTHHFHCACISRWLRTKATCPLCKYNIRRADTLV 297
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 193/332 (58%), Gaps = 46/332 (13%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ R PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L
Sbjct: 42 ARFLRRASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVL 101
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD--DEMGGEDFRDVNND 151
+++ +E PST +RLWI GY LQC++H+V + +EY+RR + GG +++
Sbjct: 102 VMSRDETPSTPLRLWIIGYGLQCVLHMVCICVEYKRRRHLASSGAVERSGGWGSGHLSSS 161
Query: 152 SEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
S +E D I YR R L
Sbjct: 162 SGSDEGDPIDYRVEVRNRVEDETR----------------------------------LC 187
Query: 212 VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEV 271
+VFLAFDVFF + CV +AC+IGIA+CCCLPCIIAILY VA QEGA++ ++ LPKY+F
Sbjct: 188 IVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRR 247
Query: 272 QNNDEKLG-----VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPC 326
EKL G M +T+ E ++ EDAECCICLS+YED TEL LPC
Sbjct: 248 IGESEKLNGEIQESFGGIMTECDTD---TPMEHVIPQEDAECCICLSAYEDETELRELPC 304
Query: 327 NHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
H FH TCI KWL +NATCPLCK NILK Q
Sbjct: 305 RHRFHCTCIDKWLYINATCPLCKLNILKNASQ 336
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/155 (72%), Positives = 129/155 (83%)
Query: 204 APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSI 263
APRLYWL+VVFLAFDVFFA+FCV +AC IGIALCCCLPC+IAILYA+AGQEGAS+AD+
Sbjct: 2 APRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAILYALAGQEGASDADIGF 61
Query: 264 LPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
LP+YR+ + D + G G M+P+ N G +ERILL EDAECCICLSSYEDG EL A
Sbjct: 62 LPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAECCICLSSYEDGAELSA 121
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
LPCNHHFH TCI KWL+M+ATCPLCKYNILKG+E
Sbjct: 122 LPCNHHFHWTCITKWLRMHATCPLCKYNILKGSES 156
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 202/304 (66%), Gaps = 21/304 (6%)
Query: 28 NAARPATL---ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
NA R +L A LL R+ R PSMLVRE AA LEER+ADW YS+PVVALD++WN
Sbjct: 32 NALRRPSLRGAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPVVALDLLWNI 91
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR----VRDDE 139
+F+ V+A +L+++ NE +R W+ GYALQC+VH+V V +EYR R ++R V DE
Sbjct: 92 SFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVPADE 151
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDL 199
G D ++ ED E+ + R + S K ES NTM SF+WWI+GFYW+ +GG+
Sbjct: 152 ERGSDV-SSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGGEE 210
Query: 200 LLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEA 259
+++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE
Sbjct: 211 VIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASED 270
Query: 260 DLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN-------ERILLPEDAECCICL 312
D+ +PKY+F + EK A E++GG + E+ L EDAECCIC+
Sbjct: 271 DIRQIPKYKFRRVDEPEKDSADA-----TESSGGIMTECGTNQPIEKALAAEDAECCICI 325
Query: 313 SSYE 316
S+ E
Sbjct: 326 SAAE 329
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 137/194 (70%), Gaps = 9/194 (4%)
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG L AP+LYWL +VFLAFDVFF +FC+ L
Sbjct: 3 SIVKHLESANTMFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCIAL 62
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ-EGASEADLSILPKYRFEVQNNDEKLGVG-----A 282
AC+IGIA+CCCLPCII ILYAV Q EGASE D++ L K++F ++ +KL G
Sbjct: 63 ACVIGIAVCCCLPCIIGILYAVTDQEEGASEDDVNNLSKFKFRTMSDADKLAAGIAAPVG 122
Query: 283 GKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN 342
G M TN E IL EDAECCICL YEDG EL LPCNHHFH +CI KWL +N
Sbjct: 123 GVMTECGTNPPV---EHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHIN 179
Query: 343 ATCPLCKYNILKGN 356
ATCPLCK+NI+K N
Sbjct: 180 ATCPLCKFNIVKSN 193
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/258 (53%), Positives = 172/258 (66%), Gaps = 11/258 (4%)
Query: 105 IRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE---EEDGIV 161
+R W+ GYALQC+VH+V V +EYR R +R R E+ + S + ED
Sbjct: 3 LRTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRR 62
Query: 162 YRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF 221
+ S K ES NTM SF+WWI+GFYW+ +GG+ +++ AP+LYWL +VFLAFDVFF
Sbjct: 63 GSCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFF 122
Query: 222 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK---- 277
+FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK
Sbjct: 123 VVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQTAD 182
Query: 278 -LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIV 336
G G M TN E++L PEDAECCICLS+Y+DG EL LPC HHFH CI
Sbjct: 183 ETGPFGGIMTECGTNQPI---EKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACID 239
Query: 337 KWLKMNATCPLCKYNILK 354
KWL +NATCPLCK+NI K
Sbjct: 240 KWLHINATCPLCKFNIRK 257
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/273 (51%), Positives = 173/273 (63%), Gaps = 24/273 (8%)
Query: 105 IRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGED---------FRDVNNDSEDE 155
+R WI GYALQC++H+V V +EYRRR R G ED DS
Sbjct: 3 LRFWIVGYALQCILHIVCVSVEYRRRRRRA---GVFGSEDDGIGSGGSYSSSPQGDSSQY 59
Query: 156 EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFL 215
+ S+ +S K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++FL
Sbjct: 60 VTLASLGDESSTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFL 119
Query: 216 AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNND 275
FDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA QEGAS+ D+ L +++F +
Sbjct: 120 GFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDI 179
Query: 276 EKL-----GVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
EK+ G G M T+ E +L EDAECCICLS+Y+DG EL LPC HHF
Sbjct: 180 EKIDGDIQGACGGIMTECGTDA---PTEHVLSQEDAECCICLSAYDDGVELRELPCGHHF 236
Query: 331 HSTCIVKWLKMNATCPLCKYNILK----GNEQV 359
H TC+ KWL +NATCPLCKYNILK G E+V
Sbjct: 237 HCTCVDKWLYINATCPLCKYNILKSSSNGREEV 269
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 145/201 (72%), Gaps = 13/201 (6%)
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV L
Sbjct: 8 SIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVAL 67
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVG-----AG 283
AC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +PKY+F EK VG G
Sbjct: 68 ACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSGG 127
Query: 284 KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
M+ TN E++L EDAECCICLS+Y+DG EL LPC HHFH CI KWL +NA
Sbjct: 128 IMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINA 184
Query: 344 TCPLCKYNILK-----GNEQV 359
TCPLCKYN+ K G+E+V
Sbjct: 185 TCPLCKYNVRKNSSSSGSEEV 205
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 159/243 (65%), Gaps = 11/243 (4%)
Query: 120 VVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE---EEDGIVYRTSTRTSFTKRCES 176
+V V +EYR R +R R E+ + S + ED + S K ES
Sbjct: 1 MVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCTDCVSIAKHLES 60
Query: 177 INTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 236
NTM SF+WWI+GFYW+ +GG+ +++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+
Sbjct: 61 ANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAV 120
Query: 237 CCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGVGAGKMVPIETN 291
CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK G G M TN
Sbjct: 121 CCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQTADETGPFGGIMTECGTN 180
Query: 292 GGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
E++L PEDAECCICLS+Y+DG EL LPC HHFH CI KWL +NATCPLCK+N
Sbjct: 181 QPI---EKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKFN 237
Query: 352 ILK 354
I K
Sbjct: 238 IRK 240
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 146/217 (67%), Gaps = 13/217 (5%)
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
ED E R K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +
Sbjct: 18 EDAGERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCI 77
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQ 272
VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F
Sbjct: 78 VFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRM 137
Query: 273 NNDEK-----LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
+ EK G G M+ TN E++L EDAECCICLS+Y+DG EL LPC
Sbjct: 138 DEPEKQSVNMTGSSGGIMIECGTNQPI---EKVLAAEDAECCICLSAYDDGAELRELPCG 194
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNILK-----GNEQV 359
HHFH CI KWL +NATCPLCK+N+ K G+E+V
Sbjct: 195 HHFHCVCIDKWLHINATCPLCKFNVRKNSSSSGSEEV 231
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 106/132 (80%)
Query: 228 LACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVP 287
+AC IGIALCCCLPC+IAILYA+AGQEGAS+AD+ LP+YR+ + D + G G M+P
Sbjct: 1 MACFIGIALCCCLPCVIAILYALAGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMIP 60
Query: 288 IETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
+ N G +ERILL EDAECCICLSSYEDG EL ALPCNHHFH TCI KWL+M+ATCPL
Sbjct: 61 VLNNSGTSTSERILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPL 120
Query: 348 CKYNILKGNEQV 359
CKYNILKG+E
Sbjct: 121 CKYNILKGSESA 132
>gi|413919226|gb|AFW59158.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 291
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 149/213 (69%), Gaps = 10/213 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ +E +R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE--------EEDGI 160
+ GYALQC+VH++ V +EYR R+ +R + G DV S+ E +
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQR--GSAVAGAAPADVERGSDASSSSSDEDDRELDL 176
Query: 161 VYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
R + S K ES NTM SF+WWI+GFYW+ +GG+ ++Q AP+LYWL +VFLAFDVF
Sbjct: 177 HGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVF 236
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
F +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 237 FVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 269
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 186 WIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 245
WI+GFYWV +GG L +P+LYWL +VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 246 ILYAVAGQEGASEADLSILPKYRFEVQNNDEKL-----GVGAGKMVPIETNGGYVANERI 300
ILYAV QEGAS+ D+ L K++F + +KL G G M T+ E +
Sbjct: 61 ILYAVTDQEGASKEDIDQLAKFKFRRDGDIDKLTGDDQGCSGGIMTECGTDS---PMEHV 117
Query: 301 LLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
L EDAECCICLS+YEDG EL LPC HHFH TC+ KWL +NATCPLCKY+ILK Q
Sbjct: 118 LSGEDAECCICLSAYEDGAELRQLPCGHHFHCTCVDKWLYINATCPLCKYDILKSTSQ 175
>gi|110743179|dbj|BAE99481.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 180
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 114/167 (68%), Gaps = 6/167 (3%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNA---ARPATLALLLGRATGRGHGPSMLVRETAA 58
S SSD+ A D HAPLLRPR ++ ARP LA+LLGR TG PSMLVRETAA
Sbjct: 3 SYSSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGH-RAPSMLVRETAA 61
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
R LEERR DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL
Sbjct: 62 RALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLF 121
Query: 119 HVVLVWMEYRRRN-TRRVRD-DEMGGEDFRDVNNDSEDEEEDGIVYR 163
HVVLVW EY RRN TRR RD + ED+ + +D +++ YR
Sbjct: 122 HVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYR 168
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 174/384 (45%), Gaps = 55/384 (14%)
Query: 10 RSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRAD-W 68
R+D H+ + ++ N +PA A T P + R +A+ RR D +
Sbjct: 48 RNDQHSEM------HLTQNQDQPAGDAQDSSHQTTSSSAPRLNSRNSASL----RRGDGY 97
Query: 69 GYSKPVVALDIMWNSAFVIVSAAMLIITI-------NERPSTRIRLWICGYALQCLVHVV 121
G+ +W S ++V+ + +I +I NE P + WI GY C+ +
Sbjct: 98 GHRGRSPLNSGLWISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLP 157
Query: 122 LVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSED----------EEEDGIVYRTSTRTS-- 169
+++ +R RN +D + N +EE+G ++++R +
Sbjct: 158 ILYWRFRNRNQSNEQDTSQASQGSSGSNPPDRSYTSIYVSHVSDEENGHATQSASRNTIM 217
Query: 170 ---FTKRCESINTMASF-------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
FT R + +W++VG W+ GG AP+LY L +VFL F
Sbjct: 218 PGAFTSRLNGLVDHFKMALDCFFAVWFVVGNVWIF-GGHTSPSDAPQLYRLCIVFLTFSC 276
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDE 276
+L I CCCLPCII++L + GA+ ++ LP ++F+++NN+
Sbjct: 277 IGYAMPFILCATI----CCCLPCIISVLGIREDFSQNRGATVESINALPIFKFKLKNNEN 332
Query: 277 KLGVGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHS 332
A + GG +A ER++ EDA CCICL+ Y D EL LPC+H FH
Sbjct: 333 GDDQDANSAI---DEGGILAAGTEKERMISGEDAVCCICLAKYADDDELRELPCSHVFHV 389
Query: 333 TCIVKWLKMNATCPLCKYNILKGN 356
C+ KWLK+NATCPLCK + N
Sbjct: 390 ECVDKWLKINATCPLCKNEVGTSN 413
>gi|388502038|gb|AFK39085.1| unknown [Lotus japonicus]
Length = 89
Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/89 (77%), Positives = 75/89 (84%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+ +N E G G MVP+ET G+ ANER L PEDAECCIC+SSYEDG ELH+LPCNHHF
Sbjct: 1 MSSNGETPSEGGGSMVPLETGIGFPANERALSPEDAECCICISSYEDGAELHSLPCNHHF 60
Query: 331 HSTCIVKWLKMNATCPLCKYNILKGNEQV 359
HSTCIVKWLKMNATCPLCKYNILKGNEQV
Sbjct: 61 HSTCIVKWLKMNATCPLCKYNILKGNEQV 89
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 151/311 (48%), Gaps = 37/311 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I S +L ++ NE P + WI GYA C+ + +++ +R RN
Sbjct: 111 ISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSN 170
Query: 135 VRDDEMG----------GEDFRDVNNDSEDEEEDGIVYRTSTRTS-----FTKRCESINT 179
+D + ++ +EE+G R+++R + FT R +
Sbjct: 171 EQDTSQASQGSSGSNPPDRSYNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLVD 230
Query: 180 MASF-------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+W++VG W+ GG AP+LY L +VFL F +L I
Sbjct: 231 HFKMALDCFFAVWFVVGNVWIF-GGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATI 289
Query: 233 GIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIE 289
CCCLPCII++L + GA+ ++ LP ++F+++NN+ +
Sbjct: 290 ----CCCLPCIISVLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDVNAAI--- 342
Query: 290 TNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATC 345
GG +A ER++ EDA CCICL+ Y D EL LPC+H FH C+ KWLK+NATC
Sbjct: 343 DEGGILAAGTEKERMISGEDAVCCICLAKYADDDELRELPCSHFFHVMCVDKWLKINATC 402
Query: 346 PLCKYNILKGN 356
PLCK + N
Sbjct: 403 PLCKNEVGTSN 413
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 151/311 (48%), Gaps = 45/311 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN--- 131
+++++ + +I S +L ++ +E P + WI GYA C+ + +++ +R RN
Sbjct: 109 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 168
Query: 132 ------TRRV--RDDEMGGEDFR-DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+R+V + GG F V SE+E+ V T S + + +
Sbjct: 169 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 228
Query: 183 F----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+ +W++VG W+ GG AP LY L +VFL F +L I
Sbjct: 229 YFKMALDCFFAVWFVVGNVWIF-GGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATI 287
Query: 233 GIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNN----DEKLGVGAGKM 285
CCCLPCII+IL + GA+ ++ LP Y+F+++ N D + GAG+
Sbjct: 288 ----CCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGE- 342
Query: 286 VPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKM 341
GG VA ER++ EDA CCICL+ Y + EL LPC+H FH C+ KWLK+
Sbjct: 343 ------GGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKI 396
Query: 342 NATCPLCKYNI 352
NA CPLCK +
Sbjct: 397 NALCPLCKREV 407
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 150/311 (48%), Gaps = 45/311 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN--- 131
+++++ + +I S +L ++ +E P + WI GYA C+ + +++ +R RN
Sbjct: 89 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 148
Query: 132 ------TRRV--RDDEMGGEDFR-DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+R+V + GG F V SE+E+ V T S + + +
Sbjct: 149 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 208
Query: 183 FL----------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+ W++VG W+ GG AP LY L +VFL F +L I
Sbjct: 209 YFKMALDCFFAVWFVVGNVWIF-GGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATI 267
Query: 233 GIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNN----DEKLGVGAGKM 285
CCCLPCII+IL + GA+ ++ LP Y+F+++ N D + GAG+
Sbjct: 268 ----CCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGE- 322
Query: 286 VPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKM 341
GG VA ER++ EDA CCICL+ Y + EL LPC+H FH C+ KWLK+
Sbjct: 323 ------GGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKI 376
Query: 342 NATCPLCKYNI 352
NA CPLCK +
Sbjct: 377 NALCPLCKREV 387
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 147/305 (48%), Gaps = 27/305 (8%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + ++ S +L ++ +E+P + +W+ GYA CL + L++ Y RN
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRNGTT 138
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRT-STRTSFTKRCESINTMASF---------- 183
D+ + +S G Y + ++ T+ ES +
Sbjct: 139 QAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVESRARVGRLVEKFKIALDC 198
Query: 184 ---LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 240
+W++VG W+ GG + AP LY L +VFL F +L I CCCL
Sbjct: 199 FFAVWFVVGNVWIF-GGHSSSREAPNLYRLCIVFLTFSCIGYAMPFILCATI----CCCL 253
Query: 241 PCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA- 296
PCIIA+L A GAS ++ LP Y+F+ + + E G+ GG+VA
Sbjct: 254 PCIIALLGFREEQAQNRGASAEVIAALPTYKFKSRPSSESKD-GSESDSEGSNEGGFVAA 312
Query: 297 ---NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
ER + +DA CCICL+ Y DG L L C HHFH C+ KWLK+NA+CPLCK ++
Sbjct: 313 GTDKERAVSADDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKWLKINASCPLCKLDVG 372
Query: 354 KGNEQ 358
N+Q
Sbjct: 373 GANDQ 377
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++I++ ++ ++ S +L ++ +E+P T + W+ GYA C + +++ Y RRN
Sbjct: 112 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRN--- 168
Query: 135 VRDDEMG-GEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINT-------------- 179
D E G + + S E + + + TR++ + +T
Sbjct: 169 -HDGEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNAR 227
Query: 180 ---MASF----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
+A + +W++VG W+ GG AAP LY L +VFL F
Sbjct: 228 LSVLADYYKMALDCFFAVWFVVGNVWIF-GGHSSFTAAPNLYRLCIVFLTFSCIGYAMPF 286
Query: 227 VLACLIGIALCCCLPCIIAILYA--VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGK 284
+L +I CCCLPCII+IL ++ GAS ++ LP Y+F+++ N
Sbjct: 287 ILCAMI----CCCLPCIISILGHGDLSQVRGASAESINALPTYKFKLKKNGSGNSGEISS 342
Query: 285 MVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNAT 344
V G ER + EDA CCICL+ Y D EL LPC+H FHS C+ KWLK+NA+
Sbjct: 343 GVEGGVVGAGTEKERAISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKINAS 402
Query: 345 CPLCK 349
CPLCK
Sbjct: 403 CPLCK 407
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 143/299 (47%), Gaps = 30/299 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
V++++ + +I S +L+++ NE P + +W+ GYA CL + L++ Y + R
Sbjct: 13 VSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRT 72
Query: 135 VRDDEMGGED------------FRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ + + S D+ G R+ F +
Sbjct: 73 REPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFA--- 129
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W++VG W+ GG AP LY L +V L F +L I CCCLPC
Sbjct: 130 -IWFVVGNVWIF-GGHSAAHDAPNLYRLCIVLLTFSCIGYAMPFILCATI----CCCLPC 183
Query: 243 IIAILYAVAGQE---GASEADLSILPKYRFEVQ-NNDEKLGV-GAGKMVPIETNGGYVA- 296
IIA+L Q GAS+ ++ LP Y+F+ + +N+ KL G GG+VA
Sbjct: 184 IIALLGFREDQNQPRGASQEAIAALPTYKFKAKASNESKLNKDGNDSDSEGAGEGGWVAA 243
Query: 297 ---NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER + +DA CCICL Y+DG EL L C HHFH C+ KWLK+NA+CPLCKY+I
Sbjct: 244 GTEKERWVSADDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 302
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 32/298 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
V++++ + +I S +L+++ NE P + +W+ GYA CL + L++ Y + R
Sbjct: 13 VSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRT 72
Query: 135 VRDDEMGGED------------FRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ + + S D+ G R+ F +
Sbjct: 73 REPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFA--- 129
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W++VG W+ GG AP LY L +V L F +L I CCCLPC
Sbjct: 130 -IWFVVGNVWIF-GGHSAAHDAPNLYRLCIVLLTFSCIGYAMPFILCATI----CCCLPC 183
Query: 243 IIAILYAVAGQE---GASEADLSILPKYRFEVQ-NNDEKLGVGAGKMVPIETNGGYVA-- 296
IIA+L Q GAS+ ++ LP Y+F+ + +N+ KL ++ G +VA
Sbjct: 184 IIALLGFREDQNQPRGASQEAIAALPTYKFKAKASNESKLNKDGNDS---DSEGAWVAAG 240
Query: 297 --NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER + +DA CCICL Y+DG EL L C HHFH C+ KWLK+NA+CPLCKY+I
Sbjct: 241 TEKERWVSADDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 298
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++I++ ++ ++ S +L ++ +E+P T + W+ GYA C + +++ Y RRN
Sbjct: 92 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRN--- 148
Query: 135 VRDDEMG-GEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINT-------------- 179
D E G + + S E + + + TR++ + +T
Sbjct: 149 -HDGEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNAR 207
Query: 180 ---MASF----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
+A + +W++VG W+ GG AAP LY L +VFL F
Sbjct: 208 LSVLADYYKMALDCFFAVWFVVGNVWIF-GGHSSFTAAPNLYRLCIVFLTFSCIGYAMPF 266
Query: 227 VLACLIGIALCCCLPCIIAILYA--VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGK 284
+L +I CCCLPCII+IL ++ GAS ++ LP Y+F+++ N
Sbjct: 267 ILCAMI----CCCLPCIISILGHGDLSQVRGASAESINALPTYKFKLKKNGSGNSGEISS 322
Query: 285 MVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNAT 344
V G ER + EDA CCICL+ Y D EL LPC+H FHS C+ KWLK+NA+
Sbjct: 323 GVEGGVVGAGTEKERAISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKINAS 382
Query: 345 CPLCK 349
CPLCK
Sbjct: 383 CPLCK 387
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 147/305 (48%), Gaps = 41/305 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+ ++++ + ++ S +L ++ +E P + WI GYA C+ + L++ +R + R
Sbjct: 64 ICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGCVATLPLLY--WRYYHNRG 121
Query: 135 VRDDEMGGEDFRDVNND------SEDEEEDGIVYRTSTRTSFTKRCESINTMASFL---- 184
VR+ E R +ND S+ G S+RT + +N L
Sbjct: 122 VREQESSQASPR--SNDPSGTLLSDSTTNGGEDAPASSRTRSNQESWLMNARLKLLVEYF 179
Query: 185 ----------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
W++VG W+ GG AP LY L VVFL F +L I
Sbjct: 180 KIAVDCFFAIWFVVGNVWIF-GGHSSADQAPNLYRLCVVFLTFSCIGYAMPFILCATI-- 236
Query: 235 ALCCCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEK----LGVGAGKMVP 287
CCCLPCII+IL +A GAS ++ LP Y+F+++ N K VG G +V
Sbjct: 237 --CCCLPCIISILGVREDMAQTRGASSESINALPTYKFKMKRNKSKGESNSAVGEGGVVA 294
Query: 288 IETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
T ER++ EDA CCICL+ YE+ EL LPC+H FH C+ KWLK+NA CPL
Sbjct: 295 AGTE-----KERMISGEDAACCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPL 349
Query: 348 CKYNI 352
CK +
Sbjct: 350 CKSEV 354
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 144/305 (47%), Gaps = 37/305 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + ++ S +L ++ +E P + WI GYA C+ + L++ YR RN
Sbjct: 109 ISVELVLTLSQIVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSL 168
Query: 135 VRDDEMGGEDFRDVN-------------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMA 181
+D + +N ++S+D R S R + +
Sbjct: 169 EQDSAQNHQGSAHINVPAGPFSLSVSRNSESDDRRSATTSPRGSQNAVLNARLKVLVEYF 228
Query: 182 SF-------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
+W++VG W+ GG + AP LY L +VFL F +L I
Sbjct: 229 KMALDCFFAVWFVVGNVWIF-GGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATI-- 285
Query: 235 ALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETN 291
CCCLPCII++L + GA+ + LP Y+F++ N AG ++
Sbjct: 286 --CCCLPCIISVLGYREDLTQTRGATTESIDALPTYKFKLIKNRNGEDSSAGA-----SD 338
Query: 292 GGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
GG VA ER++ EDA CCICL+ + + EL LPC+H FH C+ KWLK+NA+CPL
Sbjct: 339 GGVVAAGTEKERVISGEDAVCCICLAKFANNDELRELPCSHFFHKECVDKWLKINASCPL 398
Query: 348 CKYNI 352
CK +
Sbjct: 399 CKSEV 403
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 147/316 (46%), Gaps = 38/316 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + ++ S +L ++ +E+P + +W+ GYA CL + L++ Y RN
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRNGTT 138
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVY------RTSTRT------SFTKRCESINTMAS 182
D+ + +S G Y ST S + +S + +
Sbjct: 139 QAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVEPRARSRGRDVDSASDNSG 198
Query: 183 FL-------------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
+ W++VG W+ GG + AP LY L +VFL F +L
Sbjct: 199 LVEKFKIALDCFFAVWFVVGNVWIF-GGHSSSREAPNLYRLCIVFLTFSCIGYAMPFILC 257
Query: 230 CLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMV 286
I CCCLPCIIA+L A GAS ++ LP Y+F+ + + E G+
Sbjct: 258 ATI----CCCLPCIIALLGFREEQAQNRGASAEVIAALPTYKFKSRPSSESKD-GSESDS 312
Query: 287 PIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN 342
GG+VA ER + +DA CCICL+ Y DG L L C HHFH C+ KWLK+N
Sbjct: 313 EGSNEGGFVAAGTDKERAVSADDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKWLKIN 372
Query: 343 ATCPLCKYNILKGNEQ 358
A+CPLCK ++ N+Q
Sbjct: 373 ASCPLCKLDVGGANDQ 388
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 146/303 (48%), Gaps = 33/303 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + ++ S +L ++ +E P T + WI GYA C + L++ Y N R
Sbjct: 116 ISIELVLLVSQIVASIIVLSLSRHEHPRTPLFHWIIGYASGCAATLPLLYWRYYHHNHMR 175
Query: 135 VR------------DDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ +D G F N ED + R++ + R + T+
Sbjct: 176 EQDSSQSRQSSPRINDPSGTLLFSSRTNSGEDGQAAVASSRSNQASLLMNR--RMKTLVE 233
Query: 183 F----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+ +W++VG W+ GG ++ AP LY L +VFLAF +L I
Sbjct: 234 YFKISLDCFFAVWFVVGNVWIF-GGHSSVEEAPNLYRLCIVFLAFSCIGYAMPFILCSTI 292
Query: 233 GIALCCCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIE 289
CCCLPCII+IL ++ GA+ ++ LP Y+F+ + N ++ G
Sbjct: 293 ----CCCLPCIISILGVREDMSQNRGAASESINALPIYKFKTKKN-KRNGDSNSAAAEGG 347
Query: 290 TNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
ER++ EDA CCICL+ YE+ EL LPC+H FH C+ KWLK+NA CPLCK
Sbjct: 348 VVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCK 407
Query: 350 YNI 352
++
Sbjct: 408 SDV 410
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 154/317 (48%), Gaps = 56/317 (17%)
Query: 64 RRADWGYSK----PV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYAL 114
RR+D GYS+ P+ ++++++ + +I S +L ++ +E P + W+ GYA
Sbjct: 89 RRSD-GYSRRRRSPLNSGLWISVELVVTVSQIIASIVVLSLSRHENPRAPLFAWVVGYAS 147
Query: 115 QCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTST-----RTS 169
C + +++ YR RN VN SE G R S R
Sbjct: 148 GCFATLPILYWRYRTRN------------QTISVNQASETA---GAATRRSRFVGIFRMR 192
Query: 170 FTKRCESIN-TMASFL--WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
F+ + + F W++VG W+ GG AP+LY L +VFL F
Sbjct: 193 FSGMVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF 251
Query: 227 VLACLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNN----DEKLG 279
+L I CCCLPCII+IL ++ GA+ + LP Y+F+++ N D+++
Sbjct: 252 ILCATI----CCCLPCIISILGFREDLSQTRGAAPESIDALPTYKFKLKKNGDVDDQEVN 307
Query: 280 VGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
GAG+ GG +A ER + EDA CCICL+ Y D EL LPC H FH C+
Sbjct: 308 SGAGE-------GGVLAAGTEKERAISGEDAVCCICLAKYADNEELRELPCCHFFHVECV 360
Query: 336 VKWLKMNATCPLCKYNI 352
KWLK+NA CPLCK+ +
Sbjct: 361 DKWLKINALCPLCKFEV 377
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 143/305 (46%), Gaps = 40/305 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I S +L ++ NE P + W+ GYA C+ + +++ +R RN
Sbjct: 108 ISIELFVTVGQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQSG 167
Query: 135 VRDDEMGGEDFRDVN----------NDSEDEEEDGIVYRTSTRTSFTKRCES--INTMAS 182
+D + N + ++ EED + T R S +N +
Sbjct: 168 QQDSHQSHQGSSQNNPPDTSSYTAISVTQASEEDNFRSELAIANGQTGRPLSSRLNGLMD 227
Query: 183 FL----------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
W++VG W+ GG AP+LY L +VFL F +L I
Sbjct: 228 HFKMALDCFFAVWFVVGNVWIF-GGHSTPTDAPKLYKLCIVFLTFSCIGYAMPFILCATI 286
Query: 233 GIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQ-----NNDEKLGVGAGK 284
CCCLPCII++L + GA+ ++ LP Y+F++Q N+ + G G G
Sbjct: 287 ----CCCLPCIISLLGFREDFSQTRGATTESINSLPIYKFKLQKSESVNDHDNSGTGEGG 342
Query: 285 MVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNAT 344
++ T ER + EDA CCICL+ Y D EL LPC+H FH C+ KWLK+NA+
Sbjct: 343 VLAEGTE-----KERAISGEDAICCICLNKYADNDELRELPCSHVFHVDCVDKWLKINAS 397
Query: 345 CPLCK 349
CPLCK
Sbjct: 398 CPLCK 402
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 37/305 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + ++ S +L ++ +E P T + WI GYA C + L++ Y N +
Sbjct: 115 ISIELVLLLSQIVASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRYYHHNHMQ 174
Query: 135 VRDDEMGGEDFRDVNNDS--------EDEEEDGIVYRTSTRTS-----FTKRCESINTMA 181
++ + +N+ S + EDG S+R++ +R +++
Sbjct: 175 EQESSQSRQTSPRINDPSGTLLFSSRTNGGEDGQSAVASSRSNQPSLLMNRRMKTLVEYF 234
Query: 182 SF-------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFD-VFFA---IFCVVLAC 230
+W++VG W+ GG AP LY L +VFLAF + +A IFC +
Sbjct: 235 KISLDCFFAVWFVVGNVWIF-GGHSSANEAPNLYRLCIVFLAFSCIGYAMPFIFCSTI-- 291
Query: 231 LIGIALCCCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVP 287
CCCLPCII+IL ++ GA+ ++ LP Y+F+++ N ++ G G
Sbjct: 292 ------CCCLPCIISILGVREDMSQNRGATSESINALPIYKFKMKKN-KRNGNGNSAAAE 344
Query: 288 IETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
E ++ EDA CCICL+ YE+ EL LPC+H FH C+ KWLK+NA CPL
Sbjct: 345 GGVVAAGTEKEHVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPL 404
Query: 348 CKYNI 352
CK ++
Sbjct: 405 CKSDV 409
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 39/307 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I S +L ++ E P + WI GYA C+ + L++ Y RN
Sbjct: 107 ISVELVLTLSQIIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQAL 166
Query: 135 VRDDEMGGEDFRDVN-------------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMA 181
+D + +N ++ ED R R E +
Sbjct: 167 EQDSAQNHQGSAHINVPAGPFSLSVSRNSEGEDRRSATTSPRGGQNAVLNARYELKVLLE 226
Query: 182 SF---------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
F +W++VG W+ G + AP LY L +VFL F +L I
Sbjct: 227 YFKMALDCFFAVWFVVGNVWIF-GSHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATI 285
Query: 233 GIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIE 289
CCCLPCII+IL + GA+ + LP ++F++ N +G
Sbjct: 286 ----CCCLPCIISILGFREDLTQTRGATPESIDALPTHKFKLIKNRNGEDSSSGA----- 336
Query: 290 TNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATC 345
+GG VA ER++ EDA CCICL+ Y + EL LPC+H FH C+ KWLK+NA+C
Sbjct: 337 ADGGIVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASC 396
Query: 346 PLCKYNI 352
PLCK +
Sbjct: 397 PLCKSEV 403
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 153/328 (46%), Gaps = 49/328 (14%)
Query: 58 ARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITI-------NERPSTRIRLWIC 110
+R R D G+ +P W S +IVS + +I I NE P + W+
Sbjct: 64 SRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLI 123
Query: 111 GYALQC---LVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV-------------NNDSED 154
GY + C L H+ ++ R+NT + +++ E RDV ++ D
Sbjct: 124 GYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSE--RDVYEPNSYVVVSSAHGSEVVD 181
Query: 155 EEEDGIVYR-TSTRTSFTKRCESINTMASF-LWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+G V R S R C + F +W++VG W+ GG L AP LY L +
Sbjct: 182 SGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIF-GGRTSLHDAPNLYRLCI 240
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRF 269
VFLAF +L +I CCCLPCII+++ + GA+ + L Y+F
Sbjct: 241 VFLAFGFIGYALPFILCTMI----CCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKF 296
Query: 270 EVQN-NDEKLGVGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHAL 324
+ + D + G E NGG +A ER + EDA CCICLS + + +L L
Sbjct: 297 QSKKFQDGEAG---------EDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLREL 347
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNI 352
PCNH FH C+ KWLK+NA CPLCK ++
Sbjct: 348 PCNHVFHLECVDKWLKINALCPLCKADL 375
>gi|414884509|tpg|DAA60523.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 209
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 123/217 (56%), Gaps = 35/217 (16%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLY 208
K ES NTM SF+WWIVGFYWV +GG L AP+LY
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLY 200
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 159/321 (49%), Gaps = 42/321 (13%)
Query: 64 RRADWGYSK-PV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCL 117
RR D S+ PV ++++++ + ++ S +L ++ NE P T + WI GYA C+
Sbjct: 75 RRGDARRSRSPVHSGLWISIELVLLVSQIVASIVVLSLSRNEHPQTPLFQWIVGYASGCV 134
Query: 118 VHVVLVWMEYRRRNTRRVRDDEMGGED----------FRDVNNDSEDEEEDGIVYRTSTR 167
+ L++ Y N R +D + F ++ ++ D + S +
Sbjct: 135 ATLPLLFWRYYNHNHLREQDSAQSRQTSPRISDPSGTFLSISRNNGDAGQAAAASSRSNQ 194
Query: 168 TS--FTKRCE------SINTMASF-LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFD 218
TS +R + I+ F +W++VG W+ GG AP LY L +VFLAF
Sbjct: 195 TSILMNRRMKILVEYFKISLDCFFAVWFVVGNVWIF-GGRSSAAVAPNLYRLCIVFLAFS 253
Query: 219 VFFAIFCVVLACLIGIALCCCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNND 275
+L I CCCLPCII+IL ++ GA+ ++ LP Y+F+++ N
Sbjct: 254 CIGYAMPFILCSTI----CCCLPCIISILGVREDLSQNRGATSESINALPTYKFKMKKNK 309
Query: 276 EKLGVGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFH 331
+ + + +GG VA ER++ EDA CCICL+ YE+ EL LPC+H FH
Sbjct: 310 KNSENNSANI-----DGGTVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFH 364
Query: 332 STCIVKWLKMNATCPLCKYNI 352
C+ KWLK+NA CPLCK +
Sbjct: 365 KDCVDKWLKINALCPLCKSEV 385
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 162/376 (43%), Gaps = 51/376 (13%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAAREL 61
+S+S + AR + P P D R AT AL+ PS + +A
Sbjct: 24 TSTSHSVARENHGEP--NPVD--------RSATRALVPAL-----QAPSAVGAPSAGHTS 68
Query: 62 EERRAD---WGYSKPV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
RR+D + P+ ++++++ N + ++ + +L ++ E P + W+ GY
Sbjct: 69 GARRSDNYVRRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYT 128
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR 173
+ C + ++ Y RN ++ NN +E R + R +
Sbjct: 129 VGCFATLPHLYWRYIHRNIVNGENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLAN 188
Query: 174 CESINTMASF----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAI 223
IN + +W++VG W+ GG AP LY L +VFL F
Sbjct: 189 -PRINALFDHFKMALDCFFAVWFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYA 246
Query: 224 FCVVLACLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGV 280
+L +I CCCLPCII+++ GA+ ++ LP Y+F+ + G
Sbjct: 247 MPFILCAMI----CCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSSGN 302
Query: 281 GAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIV 336
A +GG VA ER L EDA CCICL+ Y EL LPC H FH C+
Sbjct: 303 EAEGQ-----DGGIVAAGTDKERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVD 357
Query: 337 KWLKMNATCPLCKYNI 352
KWLK+NA CPLCK I
Sbjct: 358 KWLKINALCPLCKSEI 373
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 39/307 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT-- 132
++++++ + +I S +L ++ +E P + WI GYA C+ + L++ YR RN
Sbjct: 110 ISVELVLTVSQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVT 169
Query: 133 -------RRVRDDEMGGEDFR-DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF- 183
R+ + G+ + +SE + + + + T+ +
Sbjct: 170 EQEAAQPRQSSHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYF 229
Query: 184 ---------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
+W++VG W+ GG AP +Y L +VFL F +L I
Sbjct: 230 KMALDCFFAVWFVVGNVWIF-GGHSSATEAPNMYRLCIVFLTFSCIGYAMPFILCATI-- 286
Query: 235 ALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNN------DEKLGVGAGKM 285
CCCLPCII++L + GA+ + LP Y+F++ + D G G G +
Sbjct: 287 --CCCLPCIISLLGFREDLGQTRGATSESIDALPTYKFKLNKHRTGDDRDSNSGAGDGGV 344
Query: 286 VPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATC 345
V T +ER + EDA CCICL+ Y + EL LPC+H FH C+ KWLK+NA+C
Sbjct: 345 VAAGTE-----HERFISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASC 399
Query: 346 PLCKYNI 352
PLCK +
Sbjct: 400 PLCKTEV 406
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 149/316 (47%), Gaps = 45/316 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I + +L ++ +E P + WI GYA C+ + L++ Y N
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 VRDDEMGGEDFRDVN--------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF--- 183
+D G+ ++N + S E DG +T+T +S R + A
Sbjct: 173 EQD---SGQHRPNLNVAAGPFAFSISRTSEGDG--RQTNTTSSRVSRYPGFISAARLKVI 227
Query: 184 -------------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLAC 230
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 228 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCT 286
Query: 231 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVP 287
I CCCLPCII+IL + GA+ ++ LP ++F+++ + G G
Sbjct: 287 TI----CCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSS-GDDNGSST- 340
Query: 288 IETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
+ GG VA NER + EDA CCICL+ Y + EL LPC+H FH C+ KWLK+NA
Sbjct: 341 --SEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINA 398
Query: 344 TCPLCKYNILKGNEQV 359
+CPLCK + + N +
Sbjct: 399 SCPLCKSEVGEKNSDL 414
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 149/316 (47%), Gaps = 45/316 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I + +L ++ +E P + WI GYA C+ + L++ Y N
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 VRDDEMGGEDFRDVN--------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF--- 183
+D G+ ++N + S E DG +T+T +S R + A
Sbjct: 173 EQDS---GQHRPNLNVAAGPFAFSISRTSEADG--RQTNTTSSRGSRYPGFISAARLKVI 227
Query: 184 -------------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLAC 230
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 228 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCT 286
Query: 231 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVP 287
I CCCLPCII+IL + GA+ ++ LP ++F+++ + G G
Sbjct: 287 TI----CCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSN-GDDNGSST- 340
Query: 288 IETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
+ GG VA NER + EDA CCICL+ Y + EL LPC+H FH C+ KWLK+NA
Sbjct: 341 --SEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINA 398
Query: 344 TCPLCKYNILKGNEQV 359
+CPLCK + + N +
Sbjct: 399 SCPLCKSEVGEKNSDL 414
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 33/302 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +I+ A V+ + +LI + +E P + WI GY L C+ + L++ Y RN
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 135 VRDDEMGGEDFRDV----NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL------ 184
++ + + + +++ + GIV + C ++ +A
Sbjct: 150 DQEPQQPPTTYPTLIPSQSSEGRNHRTSGIVLHLGC---ISISCPRLSVLAYHFKTGVDC 206
Query: 185 ----WWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALC 237
W++VG W+ G + Q AP +Y L + FLA V +AI ++ A A+C
Sbjct: 207 FFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AIC 261
Query: 238 CCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGY 294
CC PC+I++L + GA++ + LP Y+F+ + + G+ GG
Sbjct: 262 CCFPCLISVLRLQEDLGQNRGATQELIDALPTYKFKPKRV-KNWGIDHASSSEHLDEGGI 320
Query: 295 VA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+ ER++ EDA CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK
Sbjct: 321 LGPGTKKERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKT 380
Query: 351 NI 352
I
Sbjct: 381 EI 382
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 33/302 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +++ A V+ + +L+ + +E P + WI GY + C+ + L++ Y RN
Sbjct: 91 ISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYTVGCIASLPLIYWRYVHRNRHL 150
Query: 135 VRDDEMGGEDFR----DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL------ 184
++ + + +++ + GIV R C ++ +A
Sbjct: 151 DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLRLGC---IAISCPRLSVLAYHFKTAVDC 207
Query: 185 ----WWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALC 237
W++VG W+ G + Q AP +Y L + FLA V +AI ++ A A+C
Sbjct: 208 FFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AIC 262
Query: 238 CCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGY 294
CC PC+I++L + GA++ + LP Y+F+ + N + G+ GG
Sbjct: 263 CCFPCLISVLRLQEDLGQNRGATQELIDALPTYKFKPKRN-KNWGIDHASSSEHLDEGGI 321
Query: 295 VA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+ ER++ EDA CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK
Sbjct: 322 LGPGTKKERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKT 381
Query: 351 NI 352
I
Sbjct: 382 EI 383
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 149/316 (47%), Gaps = 45/316 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I + +L ++ +E P + WI GYA C+ + L++ Y N
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 VRDDEMGGEDFRDVN--------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF--- 183
+D G+ ++N + S E DG +T+T +S R + A
Sbjct: 173 EQDS---GQHRPNLNVAAGPFAFSISRTSEADG--RQTNTTSSRGSRYPGFISAARLKVI 227
Query: 184 -------------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLAC 230
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 228 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCT 286
Query: 231 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVP 287
I CCCLPCII+IL + GA+ ++ LP ++F+++ + G G
Sbjct: 287 TI----CCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSN-GDDNGSST- 340
Query: 288 IETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA 343
+ GG VA NER + EDA CCICL+ Y + EL LPC+H FH C+ KWLK+NA
Sbjct: 341 --SEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINA 398
Query: 344 TCPLCKYNILKGNEQV 359
+CPLCK + + N +
Sbjct: 399 SCPLCKSEVGEKNSDL 414
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 133/295 (45%), Gaps = 28/295 (9%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + +L ++ E P + W+ GY + C + ++ Y RN
Sbjct: 34 ISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 93
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF----------L 184
++ NN +E R + R + IN + +
Sbjct: 94 GENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLAN-PRINALFDHFKMALDCFFAV 152
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
W++VG W+ GG AP LY L +VFL F +L +I CCCLPCII
Sbjct: 153 WFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPCII 207
Query: 245 AIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA----N 297
+++ GA+ ++ LP Y+F+ + G A +GG VA
Sbjct: 208 SVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSSGNEAEGQ-----DGGIVAAGTDK 262
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER L EDA CCICL+ Y EL LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 263 ERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEI 317
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 143/302 (47%), Gaps = 33/302 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +I+ A V+ + +LI + +E P + WI GY L C+ + L++ Y RN
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT----SFTKRCESINTMASFL------ 184
D+ + + + +G +RTS + C ++ +A
Sbjct: 150 ---DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDC 206
Query: 185 ----WWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALC 237
W++VG W+ G + Q AP +Y L + FLA V +AI ++ A A+C
Sbjct: 207 FFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AIC 261
Query: 238 CCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGY 294
CC PC+I++L + GA++ + LP Y+F+ + + G+ GG
Sbjct: 262 CCFPCLISVLRLQEDLGQNRGATQELIDALPTYKFKPKRV-KNWGIDHASSSEHLDEGGI 320
Query: 295 VA----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+ ER++ EDA CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK
Sbjct: 321 LGPGTKKERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKT 380
Query: 351 NI 352
I
Sbjct: 381 EI 382
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 148/306 (48%), Gaps = 35/306 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I + ++L ++ NE P + W+ GY + C+ + L++ Y RN R
Sbjct: 100 ISVELIVTVSQIIAAISVLSLSRNEHPHAPLFEWVIGYTVGCIATLPLLYWRYIHRN-RL 158
Query: 135 VRDDEMGGEDF-----RDVNNDSEDE----EEDGIVYRTS--TRTSFTKRCESINTMASF 183
E ++F + N+ +E E G V T+ ++ + R + A
Sbjct: 159 TTGQESASQNFPPNSIPEANSFTESSASRISEAGHVTGTNGVSQNNTITRNPRVQAYADH 218
Query: 184 ----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG W+ GG AP LY L + FL F +L LI
Sbjct: 219 FRMALDCFFAVWFVVGNVWIF-GGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALI- 276
Query: 234 IALCCCLPCIIAILY---AVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIET 290
CCCLPCII+++ + +GA+ ++ L Y+F+++ G G ++ T
Sbjct: 277 ---CCCLPCIISLMSFREDLNQNKGATAEAINALRTYKFKLKKARNGEGSEGGGILAAGT 333
Query: 291 NGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+ ERI+ EDA CCICL+ Y + +L LPC H FH C+ KWLK+NA CPLCK
Sbjct: 334 D-----KERIVSAEDAVCCICLARYVNNDDLRELPCTHFFHKECVDKWLKINALCPLCKA 388
Query: 351 NILKGN 356
I G+
Sbjct: 389 EIDGGS 394
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 140/305 (45%), Gaps = 33/305 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT-- 132
++++++ + +I + +L ++ NE+P + WI GYA C + L++ YR RN
Sbjct: 109 ISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQAS 168
Query: 133 ---------RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF 183
R + G V+ SE EE + + +
Sbjct: 169 EQDSLQSSQSSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEY 228
Query: 184 ----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 229 FKMGLDCFFAVWFVVGNVWIF-GGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILC---- 283
Query: 234 IALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNN---DEKLGVGAGKMVP 287
+ +CCCLPCII+IL ++ GA+ ++ LP Y+F+++ + D++ +G
Sbjct: 284 VTICCCLPCIISILGFREDLSQTRGATSESINALPTYKFKLKKSRSGDDREN-NSGAGEG 342
Query: 288 IETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
ER++ EDA CCICL+ Y + EL LPC+H FH C+ KWLK+NA CPL
Sbjct: 343 GGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINALCPL 402
Query: 348 CKYNI 352
CK +
Sbjct: 403 CKAEV 407
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 28/300 (9%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + +L ++ E P + W+ GY + C + ++ Y RN
Sbjct: 91 ISIEVIVNFSQIVAAIVVLCVSRKEHPQAPLLEWVIGYTVGCFATLPHLYWRYIHRNIVN 150
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIV--YRTSTRTSFTKRCESINTMASF--------- 183
+ NN +E R + R + IN +
Sbjct: 151 GEHESSHTPQGSAHNNSNEATHAASASERRRNAARNAVLAN-PRINALFDHFKMALDCFF 209
Query: 184 -LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W++VG W+ GG AP LY L +VFL F +L +I CCCLPC
Sbjct: 210 AVWFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPC 264
Query: 243 IIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA--- 296
II+I+ GAS ++ LP Y+F+++ K G+G + G A
Sbjct: 265 IISIMGFREDTNNTRGASSESINALPTYKFKIK----KRRHGSGSETEGQEGGILAAGTD 320
Query: 297 NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
ER L EDA CCICL+ Y EL LPC H FH C+ KWLK+NA CPLCK I+ +
Sbjct: 321 KERSLSAEDAVCCICLAKYAHNDELRELPCAHCFHKDCVDKWLKINALCPLCKSEIVSSS 380
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 135/288 (46%), Gaps = 28/288 (9%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
++ + +L+ + +E P + WI GY + C+ + L+ RN ++ E +
Sbjct: 278 IVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQPPAAY 337
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTS-FTKRCESINTMASFL----------WWIVGFYWVV 194
++ + E + T T C + +A W++VG W+
Sbjct: 338 PNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVGNVWIF 397
Query: 195 SGGDLLL--QAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAILYA-- 249
G L Q AP +Y L + FLA V +AI V+ A A+CCC PC+I++L
Sbjct: 398 GGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCA-----AICCCFPCLISLLRLQE 452
Query: 250 -VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA----NERILLPE 304
+ GA++ + LP Y+F+ + + K+ V + GG + ERI+ E
Sbjct: 453 DLGHTRGATQELIDALPTYKFKPKRS--KMWVDHASSSENLSEGGILGPGTKKERIVSAE 510
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
DA CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 511 DAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 558
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 153/350 (43%), Gaps = 43/350 (12%)
Query: 31 RPATLALLLGRATGRGHGPSMLVRETAARELEERRADWG--YSKPV-----VALDIMWNS 83
RP+T AL GP + AR R ++G + P+ ++++++ N
Sbjct: 48 RPSTRALTSALQPPAAVGPPHAGNTSGAR----RGDNYGRRHRSPLNSGLWISIEVIVNV 103
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDE---- 139
+ ++ + +L ++ E P + W+ GY + C + ++ Y RN +++
Sbjct: 104 SQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEQAHSL 163
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF----------LWWIVG 189
G ++ + + RT+ R + IN + +W++VG
Sbjct: 164 QGSSQSQNNSTEPTHAASASERRRTAARNAVLAN-PRINALFDHFKMALDCFFAVWFVVG 222
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-- 247
W+ GG AP LY L +VFL F +L +I CCCLPCII+++
Sbjct: 223 NVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPCIISVMGF 277
Query: 248 -YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA----NERILL 302
GA+ ++ LP Y+F+ + G A +GG +A ER L
Sbjct: 278 REDTNNTRGATSESINSLPTYKFKTKKRRHGSGNDAEGQ-----DGGILAAGTDKERSLS 332
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
EDA CCICL+ Y EL L C H FH C+ KWLK+NA CPLCK I
Sbjct: 333 AEDAVCCICLAKYAHNDELRELACTHCFHKECVDKWLKINALCPLCKSEI 382
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 28/288 (9%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
++ + +L+ + +E P + WI GY + C+ + L+ RN ++ E +
Sbjct: 102 IVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQPPAAY 161
Query: 146 RDVNNDSEDEEED----------GIVYRTSTRTSFTKRCESINTMASF-LWWIVGFYWVV 194
++ + E + G + + R S F +W++VG W+
Sbjct: 162 PNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVGNVWIF 221
Query: 195 SGGDLLL--QAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAILYA-- 249
G L Q AP +Y L + FLA V +AI V+ A A+CCC PC+I++L
Sbjct: 222 GGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCA-----AICCCFPCLISLLRLQE 276
Query: 250 -VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA----NERILLPE 304
+ GA++ + LP Y+F+ + + K+ V + GG + ERI+ E
Sbjct: 277 DLGHTRGATQELIDALPTYKFKPKRS--KMWVDHASSSENLSEGGILGPGTKKERIVSAE 334
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
DA CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 335 DAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 150/330 (45%), Gaps = 61/330 (18%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + +I S +L ++ +E P + W+ GY C+ + +++ + RN
Sbjct: 107 ISIELAFTLTQIIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFIHRN--- 163
Query: 135 VRDDEMGGEDFRDVN------NDSED-------------EEEDGIVYRTSTRTSFTKRCE 175
G E VN N + D E ED +S+ T
Sbjct: 164 -----RGSEAVVQVNQASPHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTANTR 218
Query: 176 SINTMASF---------LWWIVGFYWVVSGGDLLLQAAPRLY--WLAVVFLAFDVFFAIF 224
M F + ++VG W+ GG + AP LY +L + F
Sbjct: 219 MGLIMDHFKTALDCFFGVLFVVGNVWIF-GGHASVSDAPNLYRYFLNPDVKTLQISFESL 277
Query: 225 CVV---LACL-------IGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEV 271
C+V L+C+ + +CCCLPCII++L + GASE ++ LP Y+F+V
Sbjct: 278 CIVYLTLSCINYAMPFILCAMICCCLPCIISVLGIREDLNQVRGASEESINTLPTYKFKV 337
Query: 272 QNNDEKLGVGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPCN 327
NDE G GG VA ER++ EDA CCICL+ Y + E+ LPC
Sbjct: 338 -TNDENGCTGQRN----SEEGGIVAIGTEKERVISGEDAVCCICLARYLEDDEMRELPCA 392
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
H FH+ C+ +WLK+NATCPLCK+ IL+ E
Sbjct: 393 HFFHAVCVDRWLKINATCPLCKFEILEREE 422
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 160/378 (42%), Gaps = 46/378 (12%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAAREL 61
+S+S SD+ P R PS S P + A S ++R L
Sbjct: 23 TSTSHQDLHSDTDEPHQEDR-PSTSTRTPSPQSSA-------------STSPTAYSSRNL 68
Query: 62 EERRADWGYSKPV--------VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
R D Y + ++ + + A + + +LI++ +E P + WI GY
Sbjct: 69 SFPRRDSFYGRGTSLWNSGLWISFEFVMYVAQITAAIVILILSRHELPHAPLVAWIIGYT 128
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR 173
+ C + LV+ Y RN + E + + + S + T
Sbjct: 129 VGCTASLPLVYWRYVHRNRPSEEEPEQPPTTYPTLTSSSSEGRNQRTSGSVLHLGCITIA 188
Query: 174 CESINTMASF----------LWWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VF 220
C + +A +W++VG W+ G Q AP +Y L + FLA V
Sbjct: 189 CPRPSILAYHSKTAVDCFFAIWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVG 248
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEK 277
+AI ++ A A+CCC PC+I++L + GA++ + LP Y+F+ + +
Sbjct: 249 YAIPFIMCA-----AICCCFPCLISVLRLQEDLGQSRGATQELIDALPTYKFKPKRSKNW 303
Query: 278 LGVGAGKMVPIETNG---GYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTC 334
+ A + G ERI+ EDA CCICL+ Y D EL LPCNH FH C
Sbjct: 304 VLDHASSSENLSEGGILGPGTKKERIVSAEDAVCCICLTKYGDDDELRELPCNHLFHVQC 363
Query: 335 IVKWLKMNATCPLCKYNI 352
+ KWLK+NA CPLCK I
Sbjct: 364 VDKWLKINAVCPLCKTEI 381
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 154/334 (46%), Gaps = 55/334 (16%)
Query: 59 RELEERRADWGYSKPV---------VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
R RR D G + ++++++ A ++ + ++++ +E P + W+
Sbjct: 81 RPTSSRRGDNGNGRRTRSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWV 140
Query: 110 CGYALQCLVHVVLVWMEYRRRN-------TRRVRDDEMGGED--FRDVNNDSEDEEEDGI 160
GY CL + +++ +R N ++R + E + V+ +EE+
Sbjct: 141 IGYTCGCLATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENST 200
Query: 161 VYRTSTRTSFTKRCESINTMASFL--------------WWIVGFYWVVSGGDLLLQAAPR 206
+ R + + ES+ T + L W++VG W+ GG +P+
Sbjct: 201 GVSAAPRNN--QVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIF-GGHSSPSDSPK 257
Query: 207 LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSI 263
LY L + FL F +L I CCCLPC+I++L + GA+ ++
Sbjct: 258 LYRLCIAFLTFSCIGYAMPFILCATI----CCCLPCLISVLGFRENFSQTRGATAEAINA 313
Query: 264 LPKYRFEVQN-NDEKLGVGAGKMVPIETNGGYV----ANERILLPEDAECCICLSSYEDG 318
LP YRF+ ++ ND + E GG++ +R++ EDA CCICL+ Y D
Sbjct: 314 LPVYRFKSKSRNDLEFSE--------EGEGGFLLLGSQKKRLISGEDASCCICLTRYGDD 365
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
++ LPC+H FH C+ KWLK+NATCPLCK +
Sbjct: 366 EQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + +I + +L ++ NE P + + W+ GY + C + ++ Y RN
Sbjct: 99 ISVELVVNVSQIIAAICVLSVSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHRNLPT 158
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCE-SINT-MASF--------- 183
+ V N + + Y + ++ E ++N +F
Sbjct: 159 TGQEPT-------VQNIPPNNTPEANSYGVTGTNGVSRNNEATVNPRFQAFADHFKMALD 211
Query: 184 ----LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 239
+W++VG WV GG AP LY L + FL F +L LI CCC
Sbjct: 212 CFFAVWFVVGNVWVF-GGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALI----CCC 266
Query: 240 LPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA 296
LPCII+IL + GAS ++ L +F+ +K G G V +
Sbjct: 267 LPCIISILGFREDLNQNRGASAETINALGTCKFK----SKKTRDGDGNEVGVGVVAAGTN 322
Query: 297 NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER++ EDA CCICL+ Y D +L LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 323 KERVISAEDAVCCICLARYVDNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEI 378
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 139/305 (45%), Gaps = 34/305 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I + +L ++ E P + + W+ GY + C+ + L++ Y RN R
Sbjct: 100 ISIELVVTVSQIIAAICVLSLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHRN-RP 158
Query: 135 VRDDEMGGEDF---------RDVNNDSEDEEEDGIVYRTS--TRTSFTKRCESINTMASF 183
E ++F + + E G V T+ ++ + R A
Sbjct: 159 TTGQEPASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNNMLTRNPRAQVYADH 218
Query: 184 ----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG WV GG AP LY L + FL F +L LI
Sbjct: 219 FRMALDCFFAVWFVVGNVWVF-GGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALI- 276
Query: 234 IALCCCLPCIIAILY---AVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIET 290
CCCLPCII+++ + +GAS ++ L Y+F+ + + G+ G
Sbjct: 277 ---CCCLPCIISLMSFREDLNQNKGASAEAINALRTYKFKTKKSRNGEGIEVGGG----V 329
Query: 291 NGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
ERI+ EDA CCICL+ Y + +L LPC H FH C+ KWLK+NA CPLCK
Sbjct: 330 VAAGTNKERIVSAEDAVCCICLARYSNNDDLRELPCTHFFHKECVDKWLKINALCPLCKA 389
Query: 351 NILKG 355
I G
Sbjct: 390 EIDSG 394
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 100/183 (54%), Gaps = 23/183 (12%)
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
+W++VG W+ GG AP LY L +VFL F +L I CCCLPCI
Sbjct: 355 VWFVVGNVWIF-GGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATI----CCCLPCI 409
Query: 244 IAIL---YAVAGQEGASEADLSILPKYRFEVQNN----DEKLGVGAGKMVPIETNGGYVA 296
I+IL + GA+ ++ LP Y+F+++ N D + GAG+ GG VA
Sbjct: 410 ISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGE-------GGVVA 462
Query: 297 ----NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER++ EDA CCICL+ Y + EL LPC+H FH C+ KWLK+NA CPLCK +
Sbjct: 463 AGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREV 522
Query: 353 LKG 355
KG
Sbjct: 523 KKG 525
>gi|218191343|gb|EEC73770.1| hypothetical protein OsI_08445 [Oryza sativa Indica Group]
Length = 213
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/142 (56%), Positives = 98/142 (69%), Gaps = 8/142 (5%)
Query: 170 FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +VFLAFDVFF +FCV LA
Sbjct: 74 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 133
Query: 230 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK-----LGVGAGK 284
C+IGIA+CCCLPCIIAILYAV+ QEGASE D+ +P+Y+F + EK G G
Sbjct: 134 CIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSSGGI 193
Query: 285 MVPIETNGGYVANERILLPEDA 306
M+ TN E++L EDA
Sbjct: 194 MIECGTNQPI---EKVLAAEDA 212
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 38/301 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + +I + A+L ++ NE P + W+ GY + C+ + ++ Y RN +
Sbjct: 88 ISIELIVNVSQIIAAIAVLSVSRNEHPRAPLFEWVVGYIIGCVATIPHLYWRYLHRNCQN 147
Query: 135 V-RDDEMGGEDFRDVNND-----------SEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ ++ G R+++ SE ED +R +F + + +
Sbjct: 148 IEQEPTTQGSSQRNISESDSFAPISSARASEVGNEDNST--GVSRNNFPIASPRVYALIA 205
Query: 183 FL----------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
L W++VG W+ GG + AP LY L +VFL F +L +I
Sbjct: 206 CLKLALDCFFAVWFVVGNVWIF-GGRSSVHDAPNLYRLCIVFLTFGFIGYALPFILCTMI 264
Query: 233 GIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFE-VQNNDEKLGVGAGKMVPI 288
CCCLPCII+++ + +GA+ + L Y+++ ++ D +G G ++
Sbjct: 265 ----CCCLPCIISMVGFHEDLDLNKGATTEVIDALVAYKYKSMRIRDGDVGEDNGGVL-- 318
Query: 289 ETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLC 348
G ER + EDA CCICLS + + +L LPC H FH CI KWLK+NA CPLC
Sbjct: 319 ---GAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCAHVFHMECIDKWLKINALCPLC 375
Query: 349 K 349
K
Sbjct: 376 K 376
>gi|357509175|ref|XP_003624876.1| RING finger protein [Medicago truncatula]
gi|355499891|gb|AES81094.1| RING finger protein [Medicago truncatula]
Length = 296
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 112/200 (56%), Gaps = 19/200 (9%)
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF-AIFCVVLAC 230
K+ E +NT+ + + GF +V GG L++ L+ L +V L+ + FF A+F +
Sbjct: 104 KKTEPMNTLVLSAFLVFGFSCIVVGGQALVEVPFLLFGLTMVCLSLNEFFDAVFSFWIYL 163
Query: 231 LIGIALCCCLPCIIAILYAVAG----QEGASEADLSILPKYRF-------EVQNNDEKLG 279
++ AL C + IIA+ YA+ +EGASE D+ LP YRF V N +L
Sbjct: 164 IVFGALFCIVQ-IIALAYALTQPLRIREGASEDDIKSLPMYRFCQPNVMIMVDKNKTQLE 222
Query: 280 VGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWL 339
G N +++ E L P+D+ECCICL Y DGTEL+ LPC HHFH CI +WL
Sbjct: 223 ARTG-----SHNRSHIS-ELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHCECIGRWL 276
Query: 340 KMNATCPLCKYNILKGNEQV 359
+ ATCPLCK+NI G+ V
Sbjct: 277 RTKATCPLCKFNIRIGDIMV 296
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 152/328 (46%), Gaps = 37/328 (11%)
Query: 52 LVRETAARELEERRADWGYSKPV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIR 106
L T+ R + R+ + P+ + ++++ + ++ S +L ++ +E P +
Sbjct: 38 LNSRTSRRRGDTTRSSRQHRSPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPRAPLF 97
Query: 107 LWICGYALQCLVHVVLVWMEYRRRNTRR---------VRDDEMGGEDFRD-VNNDSED-- 154
WI G+A C+ + L++ Y R +R ++ G D N ED
Sbjct: 98 AWIVGFASGCVATLPLLYWRYYHNCLVRELESSSQASLRSNDPSGTLLSDSTTNGGEDVP 157
Query: 155 --EEEDGIVYRTSTRTSFTKRCESINTMASF-LWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
+ + + R I F +W+IVG W+ GG AP LY L
Sbjct: 158 ASSRSNQESWLMNARLKLLVEYFKIAVDCFFAIWFIVGNVWIF-GGHSSADQAPNLYRLC 216
Query: 212 VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA---VAGQEGASEADLSILPKYR 268
VVFL F +L I CCCLPCII+IL +A GAS ++ LP Y+
Sbjct: 217 VVFLTFSCIGYAMPFILCATI----CCCLPCIISILGVREDMAQTPGASSESINSLPTYK 272
Query: 269 FEVQNNDEKLGVGAGKMVPIETNGGYVAN----ERILLPEDAECCICLSSYEDGTELHAL 324
F+++ N G+ + GG VA+ ER++ EDA CCICL+ YE+ EL L
Sbjct: 273 FKMKKN-----KSKGESNSAVSEGGVVASGTEKERMISGEDAACCICLAKYENNDELREL 327
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C+H FH C+ KWLK+NA CPLCK +
Sbjct: 328 LCSHLFHKDCVDKWLKINALCPLCKSEV 355
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 137/302 (45%), Gaps = 34/302 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + A+L ++ NE P + W+ GY + C+ + ++ Y RN R
Sbjct: 88 ISIELIVNLSQIVAAIAVLSVSRNEHPHAPLFTWLLGYTIGCIAILPHLYWRYLHRN-RP 146
Query: 135 VRDDEMGGEDFRD-----------VNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS- 182
+ EM + + V++ E DG +R + M +
Sbjct: 147 NMEQEMTPQSLSERNMSETNSYAAVSSPRTSEAVDGTNSTGVSRMNLPLASPRFYAMVAC 206
Query: 183 ---------FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG W+ G AP LY + +VFLAF +L +I
Sbjct: 207 FKLMLDCFFAVWFVVGNVWIF-GSRSSAHDAPNLYRICIVFLAFGFIVYALPFILCTMI- 264
Query: 234 IALCCCLPCIIAILYAVAG---QEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIET 290
CCCLPCII+IL GA+ ++ L Y+F+ +++ G
Sbjct: 265 ---CCCLPCIISILGVHEDLDLNRGATTEAINTLVAYKFQ----SKRVHDGDVGEDGGGV 317
Query: 291 NGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
ERI+ EDA CCICLS + + +L LPC H FH CI KWL++NA CPLCK
Sbjct: 318 LAAGTDKERIISAEDAICCICLSKFSNNEDLRELPCAHVFHMECIDKWLQINALCPLCKA 377
Query: 351 NI 352
I
Sbjct: 378 EI 379
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 31/300 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT-- 132
+++++ N + +I + +L ++ NE P + W+ GY + C+ + ++ Y +RN
Sbjct: 90 ISIELAVNLSQIIAAICVLSVSKNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLA 149
Query: 133 -------RRVRDDEMGGEDFRDVNNDSEDEE----------EDGIVYRTSTRTSFTKRCE 175
V D+ F ++ E + +V +F +
Sbjct: 150 TVQGSNQNYVPDNSFESSSFTGISPPPVSEAGVVTVSNGVLRNNVVITNPRAQAFADHFK 209
Query: 176 SINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 235
+W++VG WV GG AP LY L + FL F +L LI
Sbjct: 210 MALDCFFAVWFVVGNVWVF-GGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALI--- 265
Query: 236 LCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNG 292
CCCLPCII+++ + GA+ ++ L YRF ++ + G + G
Sbjct: 266 -CCCLPCIISLMGFREDLDENRGATSDAINALGTYRF--RSKKPRNGEANEGGGGVFAPG 322
Query: 293 GYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER + EDA CCICL+ Y D +L LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 323 --TDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEI 380
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 131/300 (43%), Gaps = 31/300 (10%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT-- 132
+++++ N + +I + +L ++ NE P + W+ GY + C+ + ++ Y +RN
Sbjct: 90 ISIELAVNLSQIIAAICVLSVSRNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLP 149
Query: 133 -------RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF-- 183
V D+ F ++ E V +R + A
Sbjct: 150 TVQGSNQNYVPDNSFESNSFTGISPPHVSEAGVVTVTNGVSRNNTVTTNPRAQAFADHFK 209
Query: 184 --------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 235
+W++VG WV GG AP LY L + FL F +L LI
Sbjct: 210 MALDCFFAVWFVVGNVWVF-GGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALI--- 265
Query: 236 LCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNG 292
CCCLPCII+++ + GA+ ++ L Y+F+ + + G + G
Sbjct: 266 -CCCLPCIISLMGFREDLNENRGATSDAINALGTYKFKTKK--PRNTEGNEGGGGVFAPG 322
Query: 293 GYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER + EDA CCICL+ Y D +L LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 323 --TDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEI 380
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 33/286 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +I+ A V+ + +LI + +E P + WI GY L C+ + L++ Y RN
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194
D+ + + + +G +RTS + +
Sbjct: 150 ---DQEPQQPPTTYPTLTPSQSSEGRNHRTS----------------GIVLHLGCISISC 190
Query: 195 SGGDLLLQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAILYA---V 250
Q AP +Y L + FLA V +AI ++ A A+CCC PC+I++L +
Sbjct: 191 PSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AICCCFPCLISVLRLQEDL 245
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA----NERILLPEDA 306
GA++ + LP Y+F+ + + G+ GG + ER++ EDA
Sbjct: 246 GQNRGATQELIDALPTYKFKPKRV-KNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDA 304
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 305 VCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 350
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 50/313 (15%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ A ++ + ++++ +E P + W+ GY C+ + +++ +R +
Sbjct: 96 ISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTSGCIATLPILYWRFRTYSRGT 155
Query: 135 VRDDEMGGEDFRDVNNDSED-------------EEEDGIVYRTSTRTSFTKRCESINTMA 181
+D NN+ + +EE+ + R + + E++ T
Sbjct: 156 GQDSSQRLSSSSQANNNPSESTPYTAVSVAQAADEENSTDMSAAPRNN--QVGETLRTRL 213
Query: 182 SFL--------------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVV 227
+ L W++VG W+ GG +P+LY L + FL F +
Sbjct: 214 NGLVDHFKMAIDCFFAVWFVVGNVWIF-GGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFI 272
Query: 228 LACLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQN-NDEKLGVGAG 283
L I CCCLPC+I++L + GA+ ++ LP YRF+ ++ ND +
Sbjct: 273 LCATI----CCCLPCLISVLGFRENFSQTRGATTEAINALPVYRFKSKSRNDLEFSE--- 325
Query: 284 KMVPIETNGGYV----ANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWL 339
E GG++ +R++ EDA CCICL+ Y D ++ LPC+H FH C+ KWL
Sbjct: 326 -----EGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDVQVRELPCSHVFHVDCVDKWL 380
Query: 340 KMNATCPLCKYNI 352
K+NATCPLCK +
Sbjct: 381 KINATCPLCKNEV 393
>gi|413938750|gb|AFW73301.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 75
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 61/75 (81%)
Query: 285 MVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNAT 344
M+PI N G +ERILL EDAECCICLSSYEDG EL ALPCNHHFH CI KWL+MNAT
Sbjct: 1 MIPILNNSGMSTSERILLREDAECCICLSSYEDGAELSALPCNHHFHWPCITKWLRMNAT 60
Query: 345 CPLCKYNILKGNEQV 359
CPLCKYNILKG++
Sbjct: 61 CPLCKYNILKGSDSA 75
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L ++ ERP +R+WI GY C++ ++L++ Y+R + + G D+
Sbjct: 108 LSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYS-----AQGDGFSLPDIEQQR 162
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+EE S + +C + + +W+++G WV AP+L+ L +
Sbjct: 163 NNEE--------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 214
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSILPKYR 268
LA++ F +L L LCCC+P + +L Y + + +GAS+ +S LP +R
Sbjct: 215 TLLAWNAISYSFPFLLFVL----LCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWR 270
Query: 269 FEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNH 328
F+ N + L GA P+ + E ECCICL+ Y + E+ LPC+H
Sbjct: 271 FKEANANLDLPNGADSNSPLSS-------------EYPECCICLAKYREKEEVRQLPCSH 317
Query: 329 HFHSTCIVKWLKMNATCPLCKYNI 352
FH C+ +WL++ + CPLCK I
Sbjct: 318 MFHLKCVDQWLRIISCCPLCKQEI 341
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 31/273 (11%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+I+SA L I+ E+P +RLWI GY L C++ ++L++ +R +
Sbjct: 70 LIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ----------- 118
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
RD N+ S+ E E +S + RC + + +W+++G W Q AP
Sbjct: 119 RDGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAP 178
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI----LYAVAGQEGASEADL 261
+L+ L L ++ C ++ + LCCC+P I ++ + + ++GAS+ +
Sbjct: 179 KLHLLCSFLLVWNAI----CYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQI 234
Query: 262 SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTEL 321
S LP +R++ + + + G LL ED ECCICL+ Y D E+
Sbjct: 235 SQLPCWRYKA----VEANINPRSQLDNSNTG--------LLKEDPECCICLAKYIDKEEV 282
Query: 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
LPC+H FH C+ KWL + ++CPLCK + +
Sbjct: 283 RQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 315
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L ++ ERP +R+WI GY C++ ++L++ Y+R + + G D+
Sbjct: 108 LSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYS-----AQGDGFSLPDIEQQR 162
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+EE S + +C + + +W+++G WV AP+L+ L +
Sbjct: 163 NNEE--------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 214
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSILPKYR 268
LA++ F +L L LCCC+P + +L Y + + +GAS+ +S LP +R
Sbjct: 215 TLLAWNAISYSFPFLLFVL----LCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWR 270
Query: 269 FEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNH 328
F+ N + L GA P+ + E ECCICL+ Y + E+ LPC+H
Sbjct: 271 FKEANANLDLPNGADSNSPLSS-------------EYPECCICLAKYREKEEVRQLPCSH 317
Query: 329 HFHSTCIVKWLKMNATCPLCKYNI 352
FH C+ +WL++ + CPLCK I
Sbjct: 318 MFHLKCVDQWLRIISCCPLCKQEI 341
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L ++ ERP +R+WI GY C++ ++L++ Y+R + + G D+
Sbjct: 77 LSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYS-----AQGDGFSLPDIEQQR 131
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+EE S + +C + + +W+++G WV AP+L+ L +
Sbjct: 132 NNEE--------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 183
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSILPKYR 268
LA++ F +L L LCCC+P + +L Y + + +GAS+ +S LP +R
Sbjct: 184 TLLAWNAISYSFPFLLFVL----LCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWR 239
Query: 269 FEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNH 328
F+ N + L GA P+ + E ECCICL+ Y + E+ LPC+H
Sbjct: 240 FKEANANLDLPNGADSNSPLSS-------------EYPECCICLAKYREKEEVRQLPCSH 286
Query: 329 HFHSTCIVKWLKMNATCPLCKYNI 352
FH C+ +WL++ + CPLCK I
Sbjct: 287 MFHLKCVDQWLRIISCCPLCKQEI 310
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
+W++VG W+ GG AP LY L +VFL F +L +I CCCLPCI
Sbjct: 9 VWFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPCI 63
Query: 244 IAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA---- 296
I+++ GA+ ++ LP Y+F+ + G A +GG VA
Sbjct: 64 ISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSSGNEAEGQ-----DGGIVAAGTD 118
Query: 297 NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER L EDA CCICL+ Y EL LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 119 KERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEI 174
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 31/273 (11%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+I+SA L I+ E+P +RLWI GY L C++ ++L++ +R +
Sbjct: 54 LIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ----------- 102
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
RD N+ S+ E E +S + RC + + +W+++G W Q AP
Sbjct: 103 RDGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAP 162
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI----LYAVAGQEGASEADL 261
+L+ L L ++ C ++ + LCCC+P I ++ + + ++GAS+ +
Sbjct: 163 KLHLLCSFLLVWNAI----CYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQI 218
Query: 262 SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTEL 321
S LP +R++ + + + G LL ED ECCICL+ Y D E+
Sbjct: 219 SQLPCWRYKAVEAN----INPRSQLDNSNTG--------LLKEDPECCICLAKYIDKEEV 266
Query: 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
LPC+H FH C+ KWL + ++CPLCK + +
Sbjct: 267 RQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 299
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 16/179 (8%)
Query: 184 LWWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCL 240
+W++VG W+ G Q AP +Y L + FLA V +A+ ++ A A+CCC
Sbjct: 113 VWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVGYAVPFIMCA-----AICCCF 167
Query: 241 PCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA- 296
PC+I++L + GA++ + LP Y+F+ + + + G+ + GG +
Sbjct: 168 PCLISVLRLQEDLGQTRGATQELIEALPTYKFKPRRS-KNWGLDYASSSENLSEGGILGP 226
Query: 297 ---NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER + EDA CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK +I
Sbjct: 227 GTKKERTVSAEDAVCCICLTKYGDDDELRELPCTHLFHVQCVDKWLKINAVCPLCKTDI 285
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 138/302 (45%), Gaps = 34/302 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + +L ++ NE P + W+ GY + C+ + ++ Y RN R
Sbjct: 88 ISIELIVNLSQIVAAVVVLSVSRNEHPQAPLFTWLLGYTIGCIAILPHLYWRYLHRN-RL 146
Query: 135 VRDDEMG-----GEDFRDVNN------DSEDEEEDGIVYRTSTRTSFTKRCESINTMAS- 182
+ EM G + ++N+ E +G +RT+ M +
Sbjct: 147 DMEQEMPPQRSPGMNISEINSYAVVSSPHASEAVEGANSTGVSRTNLPMASPRFYAMVAC 206
Query: 183 ---------FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG W+ G AP LY + +VFLAF +L +I
Sbjct: 207 FKLVLDCFFAVWFVVGNVWMF-GSRSSAHDAPNLYRICLVFLAFGFIGYALPFILCTMI- 264
Query: 234 IALCCCLPCIIAILYA---VAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIET 290
CCCLPCII++L + GA+ ++ L Y+F+ +++ G
Sbjct: 265 ---CCCLPCIISVLGVHEDLDMNRGATTEAINTLVAYKFQ----SKRVHDGDVGGDGGGV 317
Query: 291 NGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
ER + EDA CCICLS + + +L LPC H FH CI KWL++NA CPLCK
Sbjct: 318 LAAGTDKERTISAEDAICCICLSKFSNNEDLRELPCAHVFHMECIDKWLQINALCPLCKA 377
Query: 351 NI 352
I
Sbjct: 378 EI 379
>gi|357509173|ref|XP_003624875.1| RING finger protein [Medicago truncatula]
gi|355499890|gb|AES81093.1| RING finger protein [Medicago truncatula]
Length = 400
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 228 LACLIGIALCCCLPCIIAILYAVAG----QEGASEADLSILPKYRFEVQNNDEKLGVGAG 283
+CLI C+ II + YA+ +EGASE D+ LP YRF N +
Sbjct: 263 FSCLIVFGALFCIIQIIVLAYALVQPLRIREGASEDDIKSLPMYRFSQPNVMIMVDKNKK 322
Query: 284 KM--VPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKM 341
++ I ++ +E L P+D+ECCICL SY DGTEL+ LPC HHFH CI +WL+
Sbjct: 323 QLDEARIGSHNQSHISELSLHPDDSECCICLCSYVDGTELYRLPCTHHFHCECISRWLRT 382
Query: 342 NATCPLCKYNILKGN 356
ATCPLCK+NI +G+
Sbjct: 383 KATCPLCKFNIRRGD 397
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 40/271 (14%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ V + L ++ NERP +RLWI GY + CL++++L++ YR+++T F
Sbjct: 228 ITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDT-----SHENAFSF 282
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
D+ EE T+ + +C + + +W+++G WV AP
Sbjct: 283 GDIEQQQRSREE------TTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAP 336
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADL 261
L+ L + LA++ C L+ + LCC +P + + L Y + + ++GAS+ +
Sbjct: 337 ILHVLCISLLAWNAL----CYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQI 392
Query: 262 SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTEL 321
S LP +++++ + ET+ AN D ECCICL+ Y++ E+
Sbjct: 393 SSLPSWKYKLID---------------ETSDSSQANN------DPECCICLAKYKEKEEV 431
Query: 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
LPC+H FH C+ +WL++ + CPLCK ++
Sbjct: 432 RKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 462
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 38/272 (13%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ V L I+ ERP +RLWI GY + CL++++L++ YR+ D G F
Sbjct: 103 LTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQL-------DVYQGNGF 155
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAA 204
V D E ++ R TR+S +C + + +W+++G WV A
Sbjct: 156 --VLGDVEQQQRG----REETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHA 209
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEAD 260
P+L+ L V L+++ C L+ + LCC +P I ++L Y + + AS+
Sbjct: 210 PKLHVLCVSLLSWNAI----CYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQ 265
Query: 261 LSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTE 320
+S LP ++F+ I+ N ++ +D ECCICL+ Y+D E
Sbjct: 266 ISSLPSWKFKR----------------IDENASDSDSDSATATDDPECCICLAKYKDKEE 309
Query: 321 LHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ LPC H FHS C+ +WL++ + CPLCK ++
Sbjct: 310 VRKLPCQHKFHSKCVDQWLRIISCCPLCKQDL 341
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 40/271 (14%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ V + L ++ NERP +RLWI GY + CL++++L++ YR+++T F
Sbjct: 99 ITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDT-----SHENAFSF 153
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
D+ EE T+ + +C + + +W+++G WV AP
Sbjct: 154 GDIEQQQRSREE------TTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAP 207
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADL 261
L+ L + LA++ C L+ + LCC +P + + L Y + + ++GAS+ +
Sbjct: 208 ILHVLCISLLAWNAL----CYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQI 263
Query: 262 SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTEL 321
S LP +++++ + ET+ AN D ECCICL+ Y++ E+
Sbjct: 264 SSLPSWKYKLID---------------ETSDSSQANN------DPECCICLAKYKEKEEV 302
Query: 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
LPC+H FH C+ +WL++ + CPLCK ++
Sbjct: 303 RKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 128/269 (47%), Gaps = 40/269 (14%)
Query: 88 VSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRD 147
++ +L I+ E+P +RLWI GY L C++ ++L++ Y M GE R
Sbjct: 104 ITVFVLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYL-------MHGE--RV 154
Query: 148 VNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRL 207
+D+E + S +C + + +W+++G W+V Q AP+L
Sbjct: 155 GLSDTEQRRTS----QASRSLHLMNKCRTSLELFFAIWFVMGNVWIVDSRFSSFQRAPKL 210
Query: 208 YWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL---YAVAGQEGASEAD-LSI 263
+ L V L ++ C ++ + LCCC+P + ++L ++A + A+ D +S
Sbjct: 211 HLLCVFLLVWNAI----CYSFPFILFLLLCCCVPLVSSLLGYNISMASTDKAALDDQISQ 266
Query: 264 LPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
LP +R++V + M P G L ED ECCICL Y D E+
Sbjct: 267 LPCWRYKVSS-----------MQPDSNEG--------LPKEDPECCICLVKYRDEEEVRQ 307
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
LPC+H FH C+ KWL + ++CPLCK +
Sbjct: 308 LPCSHFFHLRCVDKWLSITSSCPLCKQQL 336
>gi|224071764|ref|XP_002303570.1| predicted protein [Populus trichocarpa]
gi|222841002|gb|EEE78549.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 63/79 (79%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV V+A +L+++ E P +RLW
Sbjct: 73 PSMLVRETAAEQLEERQSDWAYSKPVVILDIIWNFAFVAVAAGVLVLSRKENPGVPLRLW 132
Query: 109 ICGYALQCLVHVVLVWMEY 127
I GY LQC++H+V V +EY
Sbjct: 133 ILGYGLQCVLHMVCVCVEY 151
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 44/335 (13%)
Query: 23 PSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWN 82
P SP+++ LA+ + RAT + + A+R +D G + P ++ M +
Sbjct: 38 PESSPSSSFLMRLAMRVSRATWFIFLRRVFHYQNASR------SDLG-TNPFNSITWMIS 90
Query: 83 SAF-----VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD 137
+ V + L ++ ERP +RLWI GY + CL++++L++ YR+++T
Sbjct: 91 ELIALLVQITVITSTLALSKKERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQHT----- 145
Query: 138 DEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGG 197
+ F D+ EE T+ + RC + + +W+++G WV
Sbjct: 146 SQGNAFSFGDIELQQRSREE------TTRCSHLMNRCRTSLELFFAIWFVIGNVWVFDSR 199
Query: 198 DLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGAS 257
AP L+ L + LA++ F +L L+ + + + + ++GAS
Sbjct: 200 FGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLLSSFLGYNMNVGSSEKGAS 259
Query: 258 EADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYED 317
+ +S LP +++ K++ ++ +N D ECCICL+ Y++
Sbjct: 260 DDQISSLPSWKY--------------KLIDEASDSAQASN-------DPECCICLAKYKE 298
Query: 318 GTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
E+ LPC+H FH C+ +WL++ + CPLCK N+
Sbjct: 299 KEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQNL 333
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 38/265 (14%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L I+ ERP +RLWI GY + CL++++L++ YR+ + ++ G DV
Sbjct: 110 LAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDI-----NQGNGFVLGDVEQQQ 164
Query: 153 EDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
EE TR+S +C + + +W+++G WV AP+L+ L
Sbjct: 165 RGREE--------TRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLC 216
Query: 212 VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSILPKY 267
V LA++ C L+ + LCC +P I ++L Y + + AS+ +S LP +
Sbjct: 217 VSLLAWNAI----CYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSW 272
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
+F+ I+ + ++ + +D ECCICL+ Y+D E+ LPC+
Sbjct: 273 KFK----------------RIDDSASDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCS 316
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNI 352
H FHS C+ +WL++ + CPLCK ++
Sbjct: 317 HKFHSKCVDQWLRIISCCPLCKQDL 341
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 22/261 (8%)
Query: 89 SAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV 148
S L+I+ E+P +R+WI GY + C+++++ V+ YR+ ++ D + D
Sbjct: 97 STFTLVISKREKPVWPMRIWISGYDIGCVLNLLTVYGRYRQ--IYLIQGDALSLSDIEQQ 154
Query: 149 NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLY 208
N E VYR S +C + +W+++G WV Q AP+L+
Sbjct: 155 RNSGETS-----VYRMS---HLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLH 206
Query: 209 WLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYR 268
L + L ++ F +L L+ + + + + +GAS+ +S LP +R
Sbjct: 207 VLCITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSWR 266
Query: 269 FEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNH 328
+ + + KL +G IE + ED ECCICL+ Y+D E+ LPC+H
Sbjct: 267 HK-EPHATKLELGNDSE-SIEK----------FINEDPECCICLAKYKDKEEVRQLPCSH 314
Query: 329 HFHSTCIVKWLKMNATCPLCK 349
FH C+ +WLK+ + CPLCK
Sbjct: 315 VFHLECVDQWLKIISCCPLCK 335
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 23/282 (8%)
Query: 71 SKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR 130
S P + L+ + + ++ L I+ E+P +R+WI GY + C++ ++L++ YR+
Sbjct: 81 SSPWMMLEFVALVIQISITMFTLAISKAEKPVWPVRIWIIGYNIGCVLSLLLLYGRYRQI 140
Query: 131 NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGF 190
NT + D G D + + E+ V R S +C + + +W+++G
Sbjct: 141 NT--TQADGFGLPDL-----EQQRGSEESSVCRCSI---LMHKCRTSLELFFAIWFVMGN 190
Query: 191 YWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
WV AP+L+ L + LA++ F +L L+ + + +
Sbjct: 191 VWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVLGYNMNMG 250
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
+ + GAS+ +S LP +R++ + + + A I + ED ECCI
Sbjct: 251 SAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIAS-------------EDLECCI 297
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CL+ Y+D E+ LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 298 CLAKYKDKEEVRKLPCSHMFHLKCVDQWLRIISCCPLCKQGL 339
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 32/270 (11%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ ++ L+I+ E+P +R+WI GY + CL+ ++LV+ YR+ + V+ D G D
Sbjct: 81 ISMTTFTLVISKMEKPIWPMRIWIVGYDIGCLLSLLLVYGRYRQVHV--VQGDSFGLSDL 138
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
+ SED S T +C + + +W+++G WV AP
Sbjct: 139 -EQQRGSED----------SRCTHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFNRAP 187
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILP 265
+L+ L + LA++ F +L L+ + + + + + GAS+ +S LP
Sbjct: 188 KLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMQMGSAERGASDDQISRLP 247
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN---ERILLPEDAECCICLSSYEDGTELH 322
++++ ++TN +N L +D ECCICL+ Y+D E+
Sbjct: 248 SWKYKA----------------VDTNSEVASNIDCTSTLANDDPECCICLAKYKDKEEVR 291
Query: 323 ALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 292 QLPCSHMFHLKCVDQWLRIISCCPLCKQEL 321
>gi|361066493|gb|AEW07558.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 68/82 (82%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA++LEER++DW YSKPVV LDI+WN +FV+VS +L T++ERP+T +R+W
Sbjct: 49 PSMLVRENAAQQLEERQSDWAYSKPVVILDILWNLSFVVVSVVILSSTLDERPTTPLRIW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRR 130
I GYALQC++H++ V EY RR
Sbjct: 109 IAGYALQCILHMIYVAYEYIRR 130
>gi|383156391|gb|AFG60447.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156392|gb|AFG60448.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156393|gb|AFG60449.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156394|gb|AFG60450.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156395|gb|AFG60451.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156396|gb|AFG60452.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156397|gb|AFG60453.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156398|gb|AFG60454.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156399|gb|AFG60455.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156400|gb|AFG60456.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156401|gb|AFG60457.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156402|gb|AFG60458.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156403|gb|AFG60459.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156404|gb|AFG60460.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156405|gb|AFG60461.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156406|gb|AFG60462.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156407|gb|AFG60463.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156408|gb|AFG60464.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA++LEER++DW YSKPV+ LDI+WN +FV+VS +L T++ERP+T +R+W
Sbjct: 49 PSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRIW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRR 130
I GYALQC++H+ V EY RR
Sbjct: 109 IVGYALQCILHMSYVAYEYIRR 130
>gi|361066495|gb|AEW07559.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA++LEER++DW YSKPV+ LDI+WN +FV+VS +L T++ERP+T +R+W
Sbjct: 49 PSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRIW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRR 130
I GYALQC++H+ V EY RR
Sbjct: 109 IVGYALQCILHMSYVAYEYIRR 130
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 27/262 (10%)
Query: 89 SAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV 148
S L+I+ E+P +R+WI GY + C+++++ V+ YR+ ++ D + D
Sbjct: 97 STFTLVISKREKPVWPMRIWISGYDIGCVLNLLTVYGRYRQ--IYLIQGDALSLSDIEQQ 154
Query: 149 NNDSEDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRL 207
N E TR S +C + +W+++G WV Q AP+L
Sbjct: 155 RNSGE------------TRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKL 202
Query: 208 YWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKY 267
+ L + L ++ F +L L+ + + + + +GAS+ +S LP +
Sbjct: 203 HVLCITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSW 262
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
R + + + KL +G IE + ED ECCICL+ Y+D E+ LPC+
Sbjct: 263 RHK-EPHATKLELGNDSE-SIEK----------FINEDPECCICLAKYKDKEEVRQLPCS 310
Query: 328 HHFHSTCIVKWLKMNATCPLCK 349
H FH C+ +WLK+ + CPLCK
Sbjct: 311 HVFHLECVDQWLKIISCCPLCK 332
>gi|194699464|gb|ACF83816.1| unknown [Zea mays]
gi|414885023|tpg|DAA61037.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 180
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 14/154 (9%)
Query: 207 LYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAILYA---VAGQEGASEADLS 262
+Y L + FLA V +AI ++ A A+CCC PC+I++L + GA++ +
Sbjct: 1 MYRLCLAFLALSCVGYAIPFIMCA-----AICCCFPCLISVLRLQEDLGQNRGATQELID 55
Query: 263 ILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDG 318
LP Y+F+ + + G+ GG + ER++ EDA CCICL+ Y D
Sbjct: 56 ALPTYKFKPKRV-KNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDD 114
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
EL LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 115 DELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 148
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 23/269 (8%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ ++ L I+ E P +R+WI GY + C++ ++L++ YR+ N + G+ F
Sbjct: 48 ICITTFTLAISKAENPVWPVRIWIIGYNIGCVLSLLLLYGRYRQLNATQ-------GDGF 100
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
+ + + E+ V R S +C + + +W+++G WV AP
Sbjct: 101 GLPDLEQQGGSEESSVCRYS---HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSYFRAP 157
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILP 265
+L+ L + LA++ F +L L+ + I + + + GAS+ +S LP
Sbjct: 158 KLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVIGYNMSMGSAERGASDDQISRLP 217
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
R++ + D + V + + ED ECCICL+ Y+D E+ LP
Sbjct: 218 SRRYKAVDTDSEFR-------------NSVDCDSTVASEDLECCICLAKYKDIEEVRQLP 264
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C+H FH C+ +WL++ + CPLCK + K
Sbjct: 265 CSHMFHLKCVDQWLRIISCCPLCKQELEK 293
>gi|308081813|ref|NP_001182980.1| uncharacterized protein LOC100501295 [Zea mays]
gi|238008582|gb|ACR35326.1| unknown [Zea mays]
Length = 167
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPV+ +D++WN AFV ++AA++ ++ E P+ +R+W
Sbjct: 62 PSVAVRETAAEHLEERQTDWAYSKPVIVVDMLWNVAFVAIAAAVVAASLGEIPAVPLRVW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR 146
I GY LQCL+H++ V +EYRRR RR D E G DF+
Sbjct: 122 IAGYVLQCLLHILCVTVEYRRR--RRDADQEGVGVDFK 157
>gi|414884510|tpg|DAA60524.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 93
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 48/62 (77%)
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
E IL EDAECCICL YEDG EL LPCNHHFH +CI KWL +NATCPLCK++I+K N
Sbjct: 29 EHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDIIKSNR 88
Query: 358 QV 359
+
Sbjct: 89 DI 90
>gi|223972729|gb|ACN30552.1| unknown [Zea mays]
Length = 166
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV +D++WN AFV ++AA+L ++ E P+ +R+W
Sbjct: 62 PSVAVRETAAEHLEERQTDWAYSKPVVVVDMLWNVAFVAIAAAVLAASLGESPAVPLRVW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR 146
I GY LQCL+H++ V +EYRR RR + G EDF+
Sbjct: 122 IAGYVLQCLLHILCVTVEYRR---RRRTQEGAGVEDFK 156
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 149/348 (42%), Gaps = 58/348 (16%)
Query: 18 LRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEE-RRADWGYSKPV-- 74
+RP S +P R + + RA R + + + R+D G S P
Sbjct: 1 MRPPSSSATPGTGRVSAFTM---RAVARMSRARWFIFLRRVYQYQNGPRSDLG-SNPFNS 56
Query: 75 ---VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
+AL++ A ++V+ A++ + ERP+ +R+W+ Y + ++ + L++ +R +
Sbjct: 57 PGWLALELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSS 116
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
+ GG S+D E G R+ + + + +W+++G
Sbjct: 117 S-----GARGG-------TLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNV 164
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
WV APRLY L + LA++ V+ L + + A+ YA+
Sbjct: 165 WVFDARLGSFHRAPRLYALCIGLLAWNA-------VVYSLPFLLFLLLCCFVPAVGYALG 217
Query: 252 GQ-------EGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPE 304
GAS+ L+ LP++RF+ + P + + +
Sbjct: 218 YNMNSASVGRGASDEQLAALPQWRFKEPAD-----------APRDRDH-----------D 255
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D ECCICL+ Y++ E+ LPC H FH C+ +WL++ ++CPLCK +
Sbjct: 256 DQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 303
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 149/348 (42%), Gaps = 58/348 (16%)
Query: 18 LRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEE-RRADWGYSKPV-- 74
+RP S +P R + + RA R + + + R+D G S P
Sbjct: 1 MRPPSSSATPGTGRVSAFTM---RAVARMSRARWFIFLRRVYQYQNGPRSDLG-SNPFNS 56
Query: 75 ---VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
+AL++ A ++V+ A++ + ERP+ +R+W+ Y + ++ + L++ +R +
Sbjct: 57 SGWLALELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSS 116
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
+ GG S+D E G R+ + + + +W+++G
Sbjct: 117 S-----GARGG-------TLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNV 164
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
WV APRLY L + LA++ V+ L + + A+ YA+
Sbjct: 165 WVFDARLGSFHRAPRLYALCIGLLAWNA-------VVYSLPFLLFLLLCCFVPAVGYALG 217
Query: 252 GQ-------EGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPE 304
GAS+ L+ LP++RF+ + P + + +
Sbjct: 218 YNMNSASVGRGASDEQLAALPQWRFKEPAD-----------APRDRDH-----------D 255
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D ECCICL+ Y++ E+ LPC H FH C+ +WL++ ++CPLCK +
Sbjct: 256 DQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 303
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 53/276 (19%)
Query: 87 IVSAAMLIITI------NERPSTRIRLWICGYALQCLVHV-VLVWMEYRRRNTRRVRDDE 139
++ A MLI T ERP+ +RLW+ Y + ++ + +L W RR D E
Sbjct: 487 VIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAARRGDDPE 546
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDL 199
M G D DS + + + + +W+++G WV
Sbjct: 547 MHGAG--DALRDS---------------SYLMNKARAFLELFFAMWFVMGNVWVFDARLG 589
Query: 200 LLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEA 259
APRLY L + LA++ +L L+ + + + + + GAS+
Sbjct: 590 SFHRAPRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDE 649
Query: 260 DLSILPKYRF---EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYE 316
L LP++RF +V + EK +D ECCICL+ Y
Sbjct: 650 QLDALPRWRFKEPDVPRDREK--------------------------DDQECCICLAQYR 683
Query: 317 DGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ E+ LPC H FH C+ +WL++ ++CPLCK +
Sbjct: 684 EKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 719
>gi|323454158|gb|EGB10028.1| hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]
Length = 360
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 42/203 (20%)
Query: 163 RTSTRTSFTKRCESINTM--ASFLWWIVGFYWVVSGGDLLLQAAPR--LYWLAVVFLAFD 218
R S R + N++ + +W++VG W++ G D A + +Y VV L
Sbjct: 145 RASRRRYLVMVTNARNSLDALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLV-- 202
Query: 219 VFFAIFCVVLACLIGIAL----CCCLPCIIAILYA----VAGQEGASEADLSILPKYRFE 270
V + C L C+ IA+ C CLPC+I +L + VAG+ GA++ DL+ LP
Sbjct: 203 VQYGQIC--LPCIFAIAMVPVFCFCLPCVIRLLASLHDPVAGR-GATKRDLARLPT---- 255
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
VP Y N +L ED C +C+S YE G +L LPC H F
Sbjct: 256 ---------------VP------YSENMELLKGEDPCCSVCISDYEKGDKLRVLPCKHLF 294
Query: 331 HSTCIVKWLKMNATCPLCKYNIL 353
H C+ +WL +NATCPLC+ +I
Sbjct: 295 HVDCVDQWLSVNATCPLCRKSIF 317
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 53/276 (19%)
Query: 87 IVSAAMLIITI------NERPSTRIRLWICGYALQCLVHV-VLVWMEYRRRNTRRVRDDE 139
++ A MLI T ERP+ +RLW+ Y + ++ + +L W RR D E
Sbjct: 72 VIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAARRGDDPE 131
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDL 199
M G D DS + + + + +W+++G WV
Sbjct: 132 MHGAG--DALRDS---------------SYLMNKARAFLELFFAMWFVMGNVWVFDARLG 174
Query: 200 LLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEA 259
APRLY L + LA++ +L L+ + + + + + GAS+
Sbjct: 175 SFHRAPRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDE 234
Query: 260 DLSILPKYRF---EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYE 316
L LP++RF +V + EK +D ECCICL+ Y
Sbjct: 235 QLDALPRWRFKEPDVPRDREK--------------------------DDQECCICLAQYR 268
Query: 317 DGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ E+ LPC H FH C+ +WL++ ++CPLCK +
Sbjct: 269 EKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 304
>gi|242062944|ref|XP_002452761.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
gi|241932592|gb|EES05737.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
Length = 89
Score = 90.9 bits (224), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 8/86 (9%)
Query: 279 GVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKW 338
G +G M+ TN E++L EDAECCIC+S+Y+DG +L LPC HHFH CI KW
Sbjct: 7 GSSSGIMIECGTNQPI---EKVLAAEDAECCICISAYDDGAKLCELPCGHHFHCICINKW 63
Query: 339 LKMNATCPLCKYNILK-----GNEQV 359
L++N CPLC+YN+ K G+E+V
Sbjct: 64 LRINVMCPLCQYNVPKNTSSSGSEEV 89
>gi|224130100|ref|XP_002320752.1| predicted protein [Populus trichocarpa]
gi|222861525|gb|EEE99067.1| predicted protein [Populus trichocarpa]
Length = 77
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 47/61 (77%)
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
ER EDAECCICLS+YEDG+EL LPCNHHFH CI KWL +NAT PLCK NI+K +
Sbjct: 11 ERAFPLEDAECCICLSAYEDGSELRELPCNHHFHRMCIDKWLCINATYPLCKLNIIKVDS 70
Query: 358 Q 358
Q
Sbjct: 71 Q 71
>gi|147815560|emb|CAN70531.1| hypothetical protein VITISV_010219 [Vitis vinifera]
Length = 305
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 123/286 (43%), Gaps = 65/286 (22%)
Query: 80 MWNSAFVIVSAAMLIITI--------NERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
+W S I+S ++ +I N ++ W+ GYA C++ + L++ Y R
Sbjct: 40 LWISLQFILSVIQIVASIVVLSLSKXNGDXDYKLFSWVVGYACGCVLMLPLLYCRYIVRG 99
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIV--YRTSTRTSFTKRCESINTMASFLWWIVG 189
T + + GIV + S F +W+++G
Sbjct: 100 TVNL--------------------QLYGIVEVLKMSLSCFFA------------VWFVLG 127
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG--IALCCCLPCIIAIL 247
WV G + +L L +VFLA C++ A + A C LP +I
Sbjct: 128 NVWVF-GSSSTGKDDTKLETLCLVFLASG------CIMYAMPVXRCAAFCLLLPFLILPT 180
Query: 248 YAVAGQEGASEAD----LSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLP 303
A + QE A EA+ + LP Y F+++ N G G ++ T+ ER +
Sbjct: 181 LA-SPQEQAREANPDYSFNALPTYNFKLKEN----GTGESGVLAAGTD-----KERAISG 230
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
EDA CCICL Y D E+ LPC+H FH C+ KWLK+N CPLC+
Sbjct: 231 EDAVCCICLGKYADNDEVRELPCSHFFHVECVDKWLKINPRCPLCQ 276
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 45/272 (16%)
Query: 87 IVSAAMLIITI------NERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEM 140
++ A MLI T+ ERP+ +RLW+ Y + ++ + L++ +R +
Sbjct: 88 VIVAQMLITTVVVVSSPKERPAWPLRLWVAAYNVGNVLSLPLLFWRHRHSSA-------- 139
Query: 141 GGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLL 200
+D E G + + + + +W+++G WV
Sbjct: 140 --------AGRGDDPEMHGASDALRNSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGS 191
Query: 201 LQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEAD 260
APRLY L + L+++ +L L+ + + + + + GAS+
Sbjct: 192 FHRAPRLYALCIGLLSWNAIVYSLPFLLFLLLCCFVPVVGYALGYNMNSASIGRGASDEQ 251
Query: 261 LSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTE 320
L+ LP++RF+ + VP + +D ECCICL+ Y + E
Sbjct: 252 LAALPRWRFKEPD------------VPRDREH-----------DDQECCICLAQYREKEE 288
Query: 321 LHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ LPC H FH C+ +WL++ ++CPLCK +
Sbjct: 289 MRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 320
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ ++ L I+ ERP +R+W+ GY + C+++++L++ YR+ + D + D
Sbjct: 97 ITITTFTLAISKRERPIWPMRIWVSGYDIGCVLNLLLLYGRYRQ--IYLTQGDSLSLSDI 154
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAA 204
N+ E TR S +C + + +W+++G WV A
Sbjct: 155 EQQRNNEE------------TRMSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHHA 202
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL----YAVAGQEGASEAD 260
P+L+ L ++ LA++ C L+ + LCCC+P I +L + +GAS
Sbjct: 203 PKLHVLCIILLAWNA----MCYSFPFLLFVLLCCCVPLISTLLGYNMNMASSNKGASNDQ 258
Query: 261 LSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTE 320
+S LP +R + +LG + +E+ L+ ED ECCICL+ Y+D E
Sbjct: 259 ISQLPSWRHKEAGAKLELGNASE------------GSEK-LINEDPECCICLAKYKDEEE 305
Query: 321 LHAL 324
+ +
Sbjct: 306 VRLI 309
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 49/285 (17%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+AL++ A V+++ A++ + ERP+ +RLW+ Y + ++ + L++
Sbjct: 186 LALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWR-------- 237
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194
D E G R+ + + + +W+++G WV
Sbjct: 238 ----HRHSSSSSSAGGGRGDLEMHGANDAPGNRSYLMNKARAFLELFFAMWFVMGNVWVF 293
Query: 195 SGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ- 253
Q APRLY L V LA++ V+ L + + A+ YA+
Sbjct: 294 DARLGSFQRAPRLYALCVSLLAWNA-------VVYSLPFLLFLLLCCFVPAVGYALGYNM 346
Query: 254 ------EGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAE 307
GAS+ L+ LP++RF+ + VA +R +D E
Sbjct: 347 NSASVGRGASDEQLAALPRWRFKEPD---------------------VARDRER--DDQE 383
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CCICL+ Y + E+ LPC H FH C+ +WL++ ++CPLCK +
Sbjct: 384 CCICLAQYGEKEEVRQLPCTHVFHLKCVDRWLRIISSCPLCKQEL 428
>gi|297743323|emb|CBI36190.3| unnamed protein product [Vitis vinifera]
Length = 920
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 52/286 (18%)
Query: 75 VALDIMWNSAFVIVSAAMLIIT-INERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR 133
++L + + ++ S +L ++ +N P ++ W+ GYA C++ + L++ Y +
Sbjct: 44 ISLQFILSVIQIVASIVVLSLSKLNGDPDYKLFSWVVGYACGCVLMLPLLYCRYILILVK 103
Query: 134 RVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL--WWIVGFY 191
++ ++ R K +++ F W+++G
Sbjct: 104 KLF-----------------------LICRLYGIVEVLKM-----SLSCFFAVWFVLGNV 135
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
WV G + +L L +VFLA + +A+ V C A C LP +I A
Sbjct: 136 WVF-GSSSTGKDDTKLETLCLVFLASGCIMYAM--PVFRC---AAFCLLLPFLILPTLA- 188
Query: 251 AGQEGASEAD----LSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
+ QE A EA+ + LP Y F+++ N G G ++ T+ ER + EDA
Sbjct: 189 SPQEQAREANPDYSFNALPTYNFKLKEN----GTGESGVLAAGTD-----KERAISGEDA 239
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CCICL Y D E+ LPC+H FH C+ KWLK+N CPLC+ +
Sbjct: 240 VCCICLGKYADNDEVRELPCSHFFHVECVDKWLKINPRCPLCQSEL 285
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 20/180 (11%)
Query: 179 TMASFL--WWIVGFYWVVSGGDLLLQAAPRLYWLAVV-FLAFDVFFAIFCVVLACLIGIA 235
T++ F W ++G W+ + A L L +V FL+ +AI + A +
Sbjct: 353 TLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFA-----S 407
Query: 236 LCCCLPCIIAILYAVAGQE--GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGG 293
LC LPC+I ++ GA+ ++ LP Y+F+ + N G G G + T
Sbjct: 408 LCLFLPCLICATLVSPHEKPRGATPESINELPTYKFKSKEN----GRGEGGVWAAGT--- 460
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER L EDA CCICL Y D EL LP C+H FH+ C+ +WLK+ A CPLC+ +
Sbjct: 461 --IKERTLSEEDAVCCICLGQYADNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSEL 518
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 37/58 (63%)
Query: 297 NERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
ER + EDA CCICL Y D EL LPC H FH C+ +WLK+NA CPLC+ I +
Sbjct: 827 QERAISEEDAVCCICLEKYVDNDELRELPCGHFFHKECVDEWLKINARCPLCQSEIAR 884
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 156 EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY---WVVSGGDLLLQAAPRLYWLAV 212
+E GIV T T E ++ + W + + W V G + ++ +
Sbjct: 526 DEGGIVLAAGTEKERTLSGEEVSKVMEVFWLTMSCFFVVWFVFGSVCFFGVSSSIHDAPI 585
Query: 213 VFLAFDVFFAIFCVVLACLIGIAL---CCCLPCIIAILYAVAGQE---GASEADL--SIL 264
+ F C + A + GIA+ C +I L + +E G S D ++L
Sbjct: 586 LEGLFKALLLSGCTIYA-MPGIAIASYCLFFSWLILSLLLLKLREKHRGTSTPDSPPNVL 644
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
P Y+F+ + N + + AG + G ED CCICL +Y D EL L
Sbjct: 645 PTYKFKSKENGGGVLLAAGTKKKSASLSG----------EDVVCCICLGNYADNEELREL 694
Query: 325 PC-NHHFHSTCIVKWLKMNATCPLCK 349
PC +H FH C+ KWLK+ A CPLC+
Sbjct: 695 PCCSHFFHVECVDKWLKIKARCPLCQ 720
>gi|225442723|ref|XP_002280502.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 295
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 75 VALDIMWNSAFVIVSAAMLIITI-NERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR 133
+++ ++ ++ S +L +++ E ++ W+ GYA C + + L++ Y T
Sbjct: 42 LSIQLILTVTQMVASLVVLWVSMAQEHRYPKLFPWVMGYASGCALMLPLLYSRYHIARTL 101
Query: 134 RVRDDEMGGEDFRDVNNDSEDEEEDGIV-YRTSTRTSFTKRCESINTMASFLWWIVGFYW 192
+ E E E+ G+V + T + F +W ++G W
Sbjct: 102 NLGSSE-------------EAEKLFGVVRFFKMTLSCFF-----------LVWLVLGIVW 137
Query: 193 VVSGGDLLLQAAPRLYWLAVV-FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
+ + A L L +V FL+ +AI + A +LC LPC+I
Sbjct: 138 IPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFA-----SLCLFLPCLICATLVSP 192
Query: 252 GQE--GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECC 309
++ GA+ ++ LP Y+F+ + N G G G + T ER L EDA CC
Sbjct: 193 HEKPRGATPESINELPTYKFKSKEN----GRGEGGVWAAGT-----IKERTLSEEDAVCC 243
Query: 310 ICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
ICL Y D EL LP C+H FH+ C+ +WLK+ A CPLC+ +
Sbjct: 244 ICLGQYADNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSEL 287
>gi|194693834|gb|ACF81001.1| unknown [Zea mays]
Length = 156
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 236 LCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNG 292
+CCCLPCII+++ + GA+ ++ L YRF ++ + G + G
Sbjct: 9 ICCCLPCIISLMGFREDLDENRGATSDAINALGTYRF--RSKKPRNGEANEGGGGVFAPG 66
Query: 293 GYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER + EDA CCICL+ Y D +L LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 67 --TDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEI 124
>gi|147815561|emb|CAN70532.1| hypothetical protein VITISV_010220 [Vitis vinifera]
Length = 232
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 98 NERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEE 157
E ++ W+ GYA C + + L++ Y T ++ + E E+
Sbjct: 3 QEHRYPKLFPWVMGYASGCALMLPLLYSRYXIARTL-------------NLGSSEEAEKL 49
Query: 158 DGIVYRTSTRTSFTKRCESINTMASFL--WWIVGFYWVVSGGDLLLQAAPRLYWLAVV-F 214
G+V F K T++ F W ++G W+ + A L L +V F
Sbjct: 50 FGVV-------RFFKM-----TLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLF 97
Query: 215 LAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQE--GASEADLSILPKYRFEVQ 272
L+ +AI + A +LC LPC+I ++ GA+ ++ LP Y+F+ +
Sbjct: 98 LSGCFVYAIPGMRFA-----SLCLFLPCLICATLVSPHEKPRGATPESINELPTYKFKSK 152
Query: 273 NNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFH 331
N G G G + T ER L EDA CCICL Y D EL LP C+H FH
Sbjct: 153 EN----GRGEGGVWAAGT-----IKERTLSEEDAVCCICLGQYADNEELRELPCCSHFFH 203
Query: 332 STCIVKWLKMNATCPLCKYNI 352
+ C+ +WLK+ A CPLC+ +
Sbjct: 204 AECVDQWLKIKACCPLCQSEL 224
>gi|388514763|gb|AFK45443.1| unknown [Lotus japonicus]
Length = 145
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 239 CLPCIIAILYAVAGQEGASEADLSILPKYRFEV----QNNDEKLGVGAGKMVPIETNGGY 294
CL ++ I + GA+ ++ LP Y+F++ ++ V G +V T
Sbjct: 17 CLVSVLGIREVLTETHGATSETINALPTYKFKMKKKKTTDESNSTVSEGGIVAKGTE--- 73
Query: 295 VANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ER++ EDA CCICL++YE+ EL LPC+H FH C+ KWLK+NA+CPLCK I
Sbjct: 74 --KERMVSKEDAVCCICLATYENNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEI 129
>gi|301111063|ref|XP_002904611.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262095928|gb|EEY53980.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 320
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 180 MASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 239
+A W++VG WV+S G + +Y LA+ + +L + LC C
Sbjct: 152 LAGLFWFLVGNMWVISDGARCDDGSA-MYQLALWMIVISYAKIFLPCLLLLALLPILCFC 210
Query: 240 LPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGK-MVPIETNGGYVANE 298
LPC+I +L + D G GA K M+ + Y AN
Sbjct: 211 LPCVIRLLSRL-----------------------QDPMRGKGATKEMIDQLESKTYTAN- 246
Query: 299 RILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+ PEDA CCICL+ YE L LPC HHFH C+ +WL +N+TCP C+ +I
Sbjct: 247 -MFPPEDACCCICLNDYEASQSLRVLPCAHHFHKECVDEWLLVNSTCPTCRKSIF 300
>gi|348669639|gb|EGZ09461.1| hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae]
Length = 321
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 82/181 (45%), Gaps = 29/181 (16%)
Query: 180 MASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 239
+A W++VG WV+S G + +Y LA+ + +L + LC C
Sbjct: 152 LAGLFWFLVGNMWVISDGARCDDGSA-MYQLALWMIVISYAKIFLPCLLLLALLPVLCFC 210
Query: 240 LPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMV--PIETNGGYVAN 297
LPC+I +L + D G GA K + +ET Y AN
Sbjct: 211 LPCVIRLLSRL-----------------------QDPMRGKGATKEIIDRLETKT-YSAN 246
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
+ PEDA CCICL+ YE L LPC HHFH C+ +WL +N+TCP C+ +I
Sbjct: 247 --MFPPEDACCCICLNDYEPSQSLRVLPCEHHFHKDCVDEWLLVNSTCPTCRKSIFDPAG 304
Query: 358 Q 358
Q
Sbjct: 305 Q 305
>gi|452822917|gb|EME29932.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 368
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 33/181 (18%)
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W+IVG W+ S + + AP LY L + + +++A+ + LAC I CCLP
Sbjct: 217 LVWFIVGSIWL-SECETCNKTAPHLYRLVLALIV--IYYALLGLPLACFCLIM--CCLPL 271
Query: 243 IIAIL--YAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIET--NGGYVANE 298
I +L YA + Q A + E NN +P + +G + E
Sbjct: 272 FIRLLLPYAESTQRRRGRAATA-------EQINN-----------LPCSSYVHGSF---E 310
Query: 299 RILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
R ED C ICL+ Y DG + LPC HH+H CI +WL ++ +CPLCK +I E
Sbjct: 311 R---EEDTSCVICLTDYIDGDMIRHLPCKHHYHKKCIDEWLALDKSCPLCKKDIDSREEI 367
Query: 359 V 359
V
Sbjct: 368 V 368
>gi|281210989|gb|EFA85155.1| hypothetical protein PPL_02155 [Polysphondylium pallidum PN500]
Length = 548
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 184 LWWIVG--FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 241
+W+IVG + D +AP L+W+ ++ + ++ C +G CCC
Sbjct: 326 IWFIVGVILTFKAKSSDQCPSSAPYLFWV--------IYSVVIIQIIICSLGFIFCCC-S 376
Query: 242 CIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERIL 301
C+ ++L E A R + KL + K+ +L
Sbjct: 377 CVFSLLRLGLNFEATDRA----ASVSRGATDSMIRKLSIKKYKV-------------GLL 419
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+D C ICLS Y + ++ LPCNHH+H CI +WL ++ +CP CK +I K
Sbjct: 420 AKDDTSCAICLSEYIEDDKIRILPCNHHYHLDCIDRWLIIDKSCPFCKRDIDK 472
>gi|444436429|gb|AGE09582.1| C3HC4Z1-like protein, partial [Eucalyptus cladocalyx]
Length = 137
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 13/100 (13%)
Query: 253 QEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICL 312
+ GAS+ +S LP ++++ +N+ LG+G ++N V L ED ECCICL
Sbjct: 49 ERGASDDQISRLPSWKYKQVDNN--LGLGD------DSNHNLV-----LANEDKECCICL 95
Query: 313 SSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
S Y++ E+ LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 96 SKYKEREEVRQLPCSHMFHQKCVDQWLRITSCCPLCKKEL 135
>gi|224056495|ref|XP_002298884.1| predicted protein [Populus trichocarpa]
gi|222846142|gb|EEE83689.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
+W+++G WV AP+L+ L + LA++ F +L L+ + +
Sbjct: 14 IWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVL 73
Query: 244 IAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLP 303
+ + + GAS+ +S LP +R++ + + + A I +
Sbjct: 74 GYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIAS------------- 120
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ED ECCICL+ Y+D E+ LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 121 EDLECCICLAKYKDKEEVRKLPCSHMFHLKCVDQWLRIISCCPLCKQGL 169
>gi|328868397|gb|EGG16775.1| transmembrane protein [Dictyostelium fasciculatum]
Length = 826
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 185 WWIVGFY--WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
W+IVG + D +AP L+W++ + IF +V+A L + CCC C
Sbjct: 340 WFIVGIVCTFKARAHDTCTSSAPYLFWVSYSVV-------IFQIVIASL-AMLFCCC-SC 390
Query: 243 IIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILL 302
I +++ E A + + + + K+ + G + N+
Sbjct: 391 IFSLMRLGVHIEMVQAAGGGGAAGGMGDSRGATDTM---LRKLSTKKFKTGVLPND---- 443
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D C ICL+ Y DG ++ LPC HH+H CI +WL N +CP CK +I
Sbjct: 444 --DCSCAICLTDYVDGEKIRILPCKHHYHLNCIDRWLIQNKSCPFCKRDI 491
>gi|147742777|gb|ABQ50557.1| hypothetical protein [Brassica rapa]
Length = 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 228 LACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRF------EVQNNDEKLGVG 281
LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L K++F D+
Sbjct: 59 LACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKVGRVNKHAGDDAQANT 118
Query: 282 AGKMVPIETNGGYVANERILLPEDA 306
GKM T+ E +L EDA
Sbjct: 119 EGKMTECGTDSPL---EHTILQEDA 140
>gi|325182411|emb|CCA16864.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 342
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 46/192 (23%)
Query: 184 LWWIVGFYWVVS------------GGDLLLQAAP--------RLYWLAVVFLAFDVFFAI 223
W++VG WV+S G+ L AAP LY LA +
Sbjct: 153 FWFLVGNMWVISDDDAQHGKPATGSGEKLEDAAPLTPSHCDPSLYHLAFWMIVITYVKIF 212
Query: 224 FCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAG 283
+L ++ +C CLPC+I +L RF+ D G GA
Sbjct: 213 LPCILLLILLPVICFCLPCLIRVLS-------------------RFQ----DPMRGKGAS 249
Query: 284 K-MVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN 342
+ ++ T Y + + +D CCICL++Y + EL LPC HHFH C +WL +N
Sbjct: 250 QEIIARLTCTNY--KKDMFAQDDCNCCICLNAYVEDEELRLLPCRHHFHKQCADEWLVVN 307
Query: 343 ATCPLCKYNILK 354
ATCP C+ +I +
Sbjct: 308 ATCPTCRLSIYE 319
>gi|403373898|gb|EJY86877.1| C3HC4-type RING finger domain-containing protein [Oxytricha
trifallax]
Length = 326
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 27/151 (17%)
Query: 208 YWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKY 267
++L F V + + V+ C++ L CCLPCI L Q+ ++ L
Sbjct: 182 FYLHYFNSLFIVLYGLNVAVIVCVMATLLVCCLPCICMALMQRRSQQITTQKIKETL--- 238
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
+V + + N+ EC ICL ++D +E+ LPC+
Sbjct: 239 --------------INSLVRTKYDNTAFKND--------ECAICLGKFDDDSEVTPLPCD 276
Query: 328 --HHFHSTCIVKWLKMNATCPLCKYNILKGN 356
H+FH+ CI W + N CPLCK I K +
Sbjct: 277 IRHYFHTDCITDWFRQNNVCPLCKTQISKQD 307
>gi|396081204|gb|AFN82822.1| hypothetical protein EROM_040540 [Encephalitozoon romaleae SJ-2008]
Length = 246
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 119/306 (38%), Gaps = 78/306 (25%)
Query: 51 MLVRE----TAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIR 106
M VRE + +ER + K ++ ++ ++V+ +L +T NE+ ++
Sbjct: 1 MYVREGEEDFVNSQTQERTNALKFLKTLIVMEGFLKVLKILVTLTVLFLTRNEKCEVPLK 60
Query: 107 LWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTST 166
L++ LV++V+ ++ ++ + F +N E E I
Sbjct: 61 LFL-------LVYMVITVAKFGIFMSKNI--------PFFRINRIPEYRENTDI------ 99
Query: 167 RTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
T F+ E++ W+++GF WV D P LY+ VVF+ F
Sbjct: 100 -TLFSNFIEAL----LLFWYLIGFNWVQECEDCS-TTNPLLYYTTVVFVGLG-----FVA 148
Query: 227 VLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMV 286
+A LI I L L + PK + EV D+
Sbjct: 149 FIAPLIAIVLLLFLITFVK-------------------PKLQ-EVMYKDQ---------- 178
Query: 287 PIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCP 346
V+++ C IC +Y G +L LPC HHFH CI +WL + TCP
Sbjct: 179 ------NDVSDDT------YHCTICFDNYIPGIKLKLLPCGHHFHQECIDEWLDLKDTCP 226
Query: 347 LCKYNI 352
LCK NI
Sbjct: 227 LCKRNI 232
>gi|401825978|ref|XP_003887083.1| hypothetical protein EHEL_040510 [Encephalitozoon hellem ATCC
50504]
gi|392998241|gb|AFM98102.1| hypothetical protein EHEL_040510 [Encephalitozoon hellem ATCC
50504]
Length = 246
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 74/293 (25%)
Query: 60 ELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVH 119
+ +ER + K ++ ++ +++S A+L +T NE+ ++L++ LV+
Sbjct: 14 QTQERTNALKFLKVLIVMEGFLKVLKILISCAVLFLTRNEKCEVPLKLFL-------LVY 66
Query: 120 VVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINT 179
+V+ ++ ++ + F +N E E I T F+ E++
Sbjct: 67 MVITIAKFGIFMSKNL--------PFFRINRIPEYRENTDI-------TLFSNFIEAL-- 109
Query: 180 MASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 239
W+++GF W+ + + A P LY+ VVF+ F +A LI I L
Sbjct: 110 --LLFWYLIGFNWIQECENCSV-ANPLLYYTTVVFVGLG-----FVAFIAPLIAIVL--- 158
Query: 240 LPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANER 299
+L+ + + PK + EV D+ V+++
Sbjct: 159 ------LLFLITFVK----------PKLQ-EVMYKDQ----------------SDVSDDT 185
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC +Y G +L LPC HHFH CI +WL + TCPLCK NI
Sbjct: 186 ------YHCAICFDNYIPGIKLKLLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|429965613|gb|ELA47610.1| hypothetical protein VCUG_00933 [Vavraia culicis 'floridensis']
Length = 241
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 76/288 (26%)
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ER + K V + +++ S VI + ++L++T+N+ +L+I Y + LV ++L
Sbjct: 18 ERLSALQCIKWFVVVVLIFKSLQVIFNTSVLVVTMNQHSKAPFKLFISVYNVLVLVQLIL 77
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVN-NDSEDEEEDGIVYRTSTRTSFTKRCESINTMA 181
++ +R E FR D +D E + F+ ++
Sbjct: 78 FFLRHR--------------EYFRVARLPDIQDNNELSL---------FSNFVDAF---- 110
Query: 182 SFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 241
S W + GF+W + +AP LY+ + + +F VV++ LI I L
Sbjct: 111 SLFWCLTGFHWTQECKTCKI-SAPLLYYTTLTWSYLGIF-----VVVSPLIAIVL----- 159
Query: 242 CIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERIL 301
+++ +A + LP ++ N G + E
Sbjct: 160 ----LIFIIAYFKPN-------LPVIEYK--------------------NTGEINKE--- 185
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+A C ICL+ Y ++ LPCNHHFH CI +W ++ CPLCK
Sbjct: 186 ---NANCSICLAEYNVNDKIKILPCNHHFHLNCIDEWFNIDDICPLCK 230
>gi|414885021|tpg|DAA61035.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 80
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CCICL+ Y D EL LPC H FH C+ KWLK+NA CPLCK I
Sbjct: 4 CCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 48
>gi|452824772|gb|EME31773.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 351
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 77/299 (25%)
Query: 64 RRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLV 123
R+A W P++ ++ A ++ S +L +T N+ ++ W+ + L++ +
Sbjct: 104 RQALW----PIIFFSFIYVGACIVASVTILCLTWNKPCDEPLKYWVLFNGVISLLYTI-- 157
Query: 124 WMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR---CESINTM 180
++R + + DD S TS +R C I +
Sbjct: 158 ---FKRLSNEDLVDD-------------------------YSQLTSIQQRSLICFRIISW 189
Query: 181 ASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 240
S W+IVG WV + + A LY L++ + ++ F V+LAC I +
Sbjct: 190 LSLAWFIVGMVWVFRC-ETCQRTAVALYRLSLALVIINLIFLGVSVLLACCIFVLA---- 244
Query: 241 PCIIAILYAVAG-----QEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYV 295
P + + + G + GA++ ++ + R+ +++E
Sbjct: 245 PNLFRPDFNLDGSVTFHRRGATKKEIDRILLVRYHRDSSEE------------------- 285
Query: 296 ANERILLPEDAECCICLSSYEDGTELHALPC--NHHFHSTCIVKWLKMNATCPLCKYNI 352
++ C ICL YE+G L LPC H FH+TC+ +WL +N +CPLCK I
Sbjct: 286 ---------ESTCPICLCEYEEGNLLRILPCTSKHRFHATCVDRWLILNKSCPLCKAEI 335
>gi|308505926|ref|XP_003115146.1| CRE-TOE-4 protein [Caenorhabditis remanei]
gi|308259328|gb|EFP03281.1| CRE-TOE-4 protein [Caenorhabditis remanei]
Length = 503
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ED C +CLS++EDG + LPCNH FH CI KWL +N CP+C+ +I
Sbjct: 446 EDDTCTVCLSNFEDGESIRKLPCNHVFHPECIYKWLDINKKCPMCREDI 494
>gi|145489990|ref|XP_001430996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398098|emb|CAK63598.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%)
Query: 301 LLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
L E +C ICL+ YEDG EL LPC H FH TCI KW K TCP+CK ++
Sbjct: 368 LAQEYKQCTICLTDYEDGEELILLPCIHRFHKTCISKWFKQMTTCPICKNDV 419
>gi|147815563|emb|CAN70534.1| hypothetical protein VITISV_010222 [Vitis vinifera]
Length = 244
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 253 QEGASEADL--SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
G S D ++LP Y+F+ + N + + AG + G ED CCI
Sbjct: 144 HRGTSTPDSPPNVLPTYKFKSKENGGGVLLAAGTKKKSASLSG----------EDVVCCI 193
Query: 311 CLSSYEDGTELHALPC-NHHFHSTCIVKWLKMNATCPLCK 349
CL +Y D EL LPC +H FH C+ KWLK+ A CPLC+
Sbjct: 194 CLGNYADNEELRELPCCSHFFHVECVDKWLKIKARCPLCQ 233
>gi|325179882|emb|CCA14284.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 320
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 299 RILLPE----DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
RI +P D CCICL +E ++ LPCNHHFHS CI +WL +NATCP C+ +I
Sbjct: 245 RIFVPTNSTYDTSCCICLCDFELNEKIRLLPCNHHFHSGCIDEWLGLNATCPTCRISI 302
>gi|219123990|ref|XP_002182297.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406258|gb|EEC46198.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 537
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
Query: 262 SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA--ECC-ICLSSYEDG 318
++LP Y+F + E + G+ P + E ILLP+ A ECC IC+ YE G
Sbjct: 266 AMLPVYQF----DGETIKPAHGRSTPALVGPDGLETE-ILLPDPATLECCSICIDDYESG 320
Query: 319 TELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNILK 354
L LPC+H FHS CI +WL + ++TCPLCK ++ +
Sbjct: 321 DRLRMLPCHHLFHSKCIGRWLSERSSTCPLCKLDLFQ 357
>gi|440494400|gb|ELQ76781.1| putative E3 ubiquitin ligase [Trachipleistophora hominis]
Length = 241
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 76/288 (26%)
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ER + K V + +++ S VI + +L++T+N+ +L+I Y + LV ++L
Sbjct: 18 ERLSALQCIKWFVVVVLIFKSLQVIYNTIILVVTMNQHTKAPFKLFISVYNVLVLVQIIL 77
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVN-NDSEDEEEDGIVYRTSTRTSFTKRCESINTMA 181
++ +R E FR D +D E + F+ ++
Sbjct: 78 FFLRHR--------------EYFRVTRLPDIQDNNELSL---------FSNFVDAF---- 110
Query: 182 SFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 241
S W + GF+W + AP LY+ + +F VV++ LI I L
Sbjct: 111 SLFWCLTGFHWTQECKTCKI-TAPWLYYTTYAWSFLGIF-----VVISPLIAIVL----- 159
Query: 242 CIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERIL 301
+++ +A + LP ++ AG E N
Sbjct: 160 ----LIFIIAYFKPN-------LPVIEYK----------NAG-----EINK--------- 184
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
E+A C ICL+ Y ++ LPCNHHFH CI +W ++ CPLCK
Sbjct: 185 --ENANCSICLAEYNMNDKIKILPCNHHFHLNCIDEWFNIDDICPLCK 230
>gi|449017510|dbj|BAM80912.1| ring finger protein [Cyanidioschyzon merolae strain 10D]
Length = 365
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 120/290 (41%), Gaps = 49/290 (16%)
Query: 86 VIVSAAMLIITINERPSTRIRLWI-CGYALQCLVHVV-LVWMEYRRRNTRRVRDDEMGG- 142
V+V AA+L++T N+ ++LWI ALQ V+ L+ Y R ++ G
Sbjct: 74 VLVEAAVLLLTRNQPCDAPLKLWIGVLIALQTASIVLRLLGSVYSRVALLELQPAGSDGS 133
Query: 143 -----EDFRDVNND-------SEDEEEDGIVYRTSTRT-SFTKRCESINTMASFLWWIV- 188
E FR S D + G + +F + + A +L WI+
Sbjct: 134 GLITQEVFRSGQRGDLTALAASSDFDAPGATFAADVEVPAFAVQQPTRILHALYLGWIIL 193
Query: 189 GFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 248
G W+ S AP L+ + V+ + F + +VL LI CCLP I L
Sbjct: 194 GSIWL-SESRTCPGTAPLLFRICVILVLVYFAFLMLPLVLITLI----ICCLPLFIRFLV 248
Query: 249 AVAG----QEGASEADL-SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLP 303
A QE A+ ++ LP +F+ + E G E +G +
Sbjct: 249 NYAERLRRQERAAAPEIVEQLPVVQFDA-SQCEDFG--------FEEDGAPI-------- 291
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
C ICLS YE E+ LPC HHFH C+ +WL + +CP C+ ++
Sbjct: 292 ----CTICLSQYEPAEEIRKLPCGHHFHRACVDQWLLFFDKSCPQCRSDV 337
>gi|115495409|ref|NP_001070092.1| RING finger protein 44 [Danio rerio]
gi|123908298|sp|Q08CG8.1|RNF44_DANRE RecName: Full=RING finger protein 44
gi|115313066|gb|AAI24247.1| Zgc:153103 [Danio rerio]
Length = 448
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++N+ E C +
Sbjct: 366 AKPRGLTKADIEQLPSYRFNLENHQS---------------------------EQTLCVV 398
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 399 CFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 437
>gi|452823709|gb|EME30717.1| hypothetical protein Gasu_19590 [Galdieria sulphuraria]
Length = 286
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 254 EGASEADLSILPKYRF----------EVQNNDEKLGVGAGKMVPIETNGGYVANERILLP 303
+GAS+ + +P Y F E+Q N + V + P E ++
Sbjct: 190 QGASDDLIERIPSYIFVQPDQNLAKNELQENTRQSSVPS--FAPKENEDTAMS------- 240
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C ICL +Y DG +L LPC H FHS C+ KWL+ A CP+CK+ IL
Sbjct: 241 ----CSICLEAYVDGEQLRVLPCMHQFHSLCVDKWLRRYARCPICKFAIL 286
>gi|449680832|ref|XP_002156770.2| PREDICTED: RING finger protein 150-like [Hydra magnipapillata]
Length = 362
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
ED C +CL SY+DG L LPC H FH +CI WL + TCP+CK NILK
Sbjct: 238 EDDTCAVCLESYKDGETLRELPCIHLFHKSCIDPWLLYHRTCPMCKSNILKS 289
>gi|327265508|ref|XP_003217550.1| PREDICTED: e3 ubiquitin-protein ligase RNF130-like [Anolis
carolinensis]
Length = 419
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K V T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTSARDRNQRRLGDAAKKAVGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH TC+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKTCVDPWLSEHCTCPMCKLNILKA 311
>gi|221110595|ref|XP_002160653.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like, partial [Hydra
magnipapillata]
Length = 359
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 27/107 (25%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G S+ +L +P +RF G K ETN ++C +
Sbjct: 278 AKLRGLSKTELDTIPSFRF---------STGTAK----ETN--------------SKCVV 310
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
C+S Y + +L LPC H FHS CI KWL+ N TCP+C+ ++ N+
Sbjct: 311 CMSEYVNREKLRRLPCTHDFHSKCIDKWLRSNRTCPVCRDDVKTANQ 357
>gi|444726338|gb|ELW66875.1| E3 ubiquitin-protein ligase RNF130 [Tupaia chinensis]
Length = 544
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 118 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 177
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 178 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 207
>gi|328768780|gb|EGF78825.1| hypothetical protein BATDEDRAFT_89994 [Batrachochytrium
dendrobatidis JAM81]
Length = 465
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
EDA C ICL+ Y+ G +L +PC HHFH+ C+ WL++ + CPLC + +Q
Sbjct: 405 EDAHCIICLAEYDSGDDLKQMPCKHHFHAICVDDWLRLKSNCPLCIQELQSDPKQ 459
>gi|328767307|gb|EGF77357.1| hypothetical protein BATDEDRAFT_37445 [Batrachochytrium
dendrobatidis JAM81]
Length = 235
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 279 GVGAGKM-VPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVK 337
G+ K VPI+ Y++NE DA C IC+ Y+DG +LH LPC HH H C K
Sbjct: 111 GITQNKTNVPIKE--LYISNE------DAHCAICIDDYKDGDQLHHLPCGHHLHFVCSKK 162
Query: 338 WLKMNATCPLCKYNILKG 355
WLK + CPLC I K
Sbjct: 163 WLKQRSRCPLCNCCINKS 180
>gi|298711234|emb|CBJ32454.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 123
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 35/124 (28%)
Query: 231 LIGIALCCCLPCIIAILYAVAG---QEGASEADLSILP--KYRFEVQNNDEKLGVGAGKM 285
L+ LC CLPC+I ++ + G ++GA + ++ LP KYR EVQ+
Sbjct: 2 LLVPVLCFCLPCVIRLMGMLQGPQRRKGARQDEIEKLPVVKYR-EVQDM----------- 49
Query: 286 VPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATC 345
ED C ICL YE EL LPC H FH TC+ WL +NA+C
Sbjct: 50 ------------------EDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASC 91
Query: 346 PLCK 349
P C+
Sbjct: 92 PNCR 95
>gi|357466367|ref|XP_003603468.1| RING finger protein [Medicago truncatula]
gi|355492516|gb|AES73719.1| RING finger protein [Medicago truncatula]
Length = 81
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CCIC+++YE+ EL LPC+H FH C+ KWLK+NA CPLCK I
Sbjct: 6 CCICIANYENDDELRELPCSHLFHKECVDKWLKINALCPLCKSEI 50
>gi|183986395|gb|AAI66595.1| LOC652955 protein [Rattus norvegicus]
Length = 354
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 157 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 216
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 217 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 246
>gi|356511447|ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine
max]
Length = 582
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 299 RILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
R+L P D C ICLS Y+ L ++P CNH+FH+ CI +WL++NATCPLC+
Sbjct: 327 RLLKPNDNTCAICLSEYQPKETLRSIPECNHYFHADCIDEWLRLNATCPLCR 378
>gi|387019687|gb|AFJ51961.1| e3 ubiquitin-protein ligase RNF130-like [Crotalus adamanteus]
Length = 423
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K V T ++ P+ C +C+ SY+ + LP
Sbjct: 226 RYTSARDRNQRRLGDAAKKAVGKLTARTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 285
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH TC+ WL + TCP+CK NILK
Sbjct: 286 CKHVFHKTCVDPWLSEHCTCPMCKLNILKA 315
>gi|83320103|ref|NP_001032747.1| E3 ubiquitin-protein ligase RNF130 precursor [Rattus norvegicus]
gi|56748898|sp|Q6Y290.1|GOLI_RAT RecName: Full=E3 ubiquitin-protein ligase RNF130; AltName:
Full=Goliath homolog; Short=R-goliath; AltName:
Full=RING finger protein 130; Flags: Precursor
gi|37779221|gb|AAO31973.1| r-goliath [Rattus norvegicus]
Length = 419
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|31981195|ref|NP_067515.2| E3 ubiquitin-protein ligase RNF130 precursor [Mus musculus]
gi|56749099|sp|Q8VEM1.1|GOLI_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF130; AltName:
Full=G1-related zinc finger protein; AltName:
Full=Goliath homolog; AltName: Full=RING finger protein
130; Flags: Precursor
gi|17390445|gb|AAH18199.1| Ring finger protein 130 [Mus musculus]
gi|37574020|gb|AAH48901.2| Ring finger protein 130 [Mus musculus]
Length = 419
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|417410470|gb|JAA51708.1| Putative e3 ubiquitin-protein ligase, partial [Desmodus rotundus]
Length = 408
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 211 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 270
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 271 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 300
>gi|148701781|gb|EDL33728.1| ring finger protein 130, isoform CRA_a [Mus musculus]
Length = 337
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 140 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 199
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 200 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 229
>gi|363739014|ref|XP_414601.3| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Gallus gallus]
Length = 458
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K V T ++ P+ C +C+ SY+ + LP
Sbjct: 261 RYTSARDRNQRRLGDAAKKAVGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 320
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH C+ WL + TCP+CK NILK
Sbjct: 321 CKHVFHKACVDPWLSEHCTCPMCKLNILKA 350
>gi|296193429|ref|XP_002744517.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Callithrix jacchus]
Length = 502
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 305 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 364
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 365 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 394
>gi|410947929|ref|XP_003980694.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Felis catus]
Length = 276
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 79 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 138
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 139 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 168
>gi|403306990|ref|XP_003943998.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Saimiri boliviensis
boliviensis]
Length = 276
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 79 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 138
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 139 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 168
>gi|148701782|gb|EDL33729.1| ring finger protein 130, isoform CRA_b [Mus musculus]
Length = 302
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 140 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 199
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 200 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 229
>gi|338713708|ref|XP_001497320.3| PREDICTED: e3 ubiquitin-protein ligase RNF130-like [Equus caballus]
Length = 276
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 79 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 138
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 139 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 168
>gi|153791581|ref|NP_001093178.1| E3 ubiquitin-protein ligase RNF130 precursor [Bos taurus]
gi|148743834|gb|AAI42201.1| RNF130 protein [Bos taurus]
Length = 419
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|395853414|ref|XP_003799206.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Otolemur garnettii]
Length = 419
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|255582119|ref|XP_002531854.1| zinc finger protein, putative [Ricinus communis]
gi|223528504|gb|EEF30532.1| zinc finger protein, putative [Ricinus communis]
Length = 161
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANE-------RILLPED---AECCICLSSY 315
+Y F + +N V AG++ +G A++ RI++ ED EC ICL
Sbjct: 43 QYLFHIADNQT---VSAGQLPAANKSGPSPASKESVDAMPRIIVTEDCRVKECAICLDDV 99
Query: 316 EDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
G+E+ +PCNH FHS CI WL ++ +CP+C+Y
Sbjct: 100 GIGSEVREMPCNHRFHSACIENWLAVHGSCPVCRY 134
>gi|335283042|ref|XP_003123692.2| PREDICTED: E3 ubiquitin-protein ligase RNF130-like [Sus scrofa]
Length = 279
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 82 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 141
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 142 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 171
>gi|296486233|tpg|DAA28346.1| TPA: ring finger protein 130 [Bos taurus]
Length = 415
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|116782843|gb|ABK22685.1| unknown [Picea sitchensis]
Length = 291
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 16/120 (13%)
Query: 252 GQEGASEADLSILPKYRFEVQNNDEKLGV--GAGKMVPIETNGGYVANERILLPEDAE-- 307
G S+A+++ LP ++++ Q++ L G G + +++ V+ E D+E
Sbjct: 158 GVPSMSDAEINTLPVHKYKTQSHQSPLDSQHGEGTSLQRQSSSCAVSKEAGTKKTDSENI 217
Query: 308 ------------CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C +CL +G + +LPC H FH++CI WL+ ATCP+CK+ + G
Sbjct: 218 EGSGKGREEELTCSVCLEQVNEGELVRSLPCLHQFHASCIDPWLRQQATCPVCKFKVGSG 277
>gi|224053779|ref|XP_002297975.1| predicted protein [Populus trichocarpa]
gi|222845233|gb|EEE82780.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 299 RILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
R+ P D C ICLS Y+ L +P CNH+FH+ C+ +WLKMNATCPLC+
Sbjct: 302 RLPKPNDNTCPICLSEYQPKDTLRTIPNCNHYFHANCVDEWLKMNATCPLCR 353
>gi|71031078|ref|XP_765181.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352137|gb|EAN32898.1| hypothetical protein TP02_0615 [Theileria parva]
Length = 1138
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +CL Y+ GTE+ LPC H FH CI WL+ + CP+CK+N +
Sbjct: 172 CSVCLEEYQQGTEIRRLPCTHSFHKNCIDTWLRKSTICPICKFNYI 217
>gi|297295906|ref|XP_002804713.1| PREDICTED: goliath homolog [Macaca mulatta]
gi|397466417|ref|XP_003804957.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Pan paniscus]
gi|426351299|ref|XP_004043190.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Gorilla gorilla
gorilla]
gi|7677054|gb|AAF67007.1|AF155650_1 goliath protein [Homo sapiens]
gi|88683075|gb|AAI13865.1| RNF130 protein [Homo sapiens]
gi|189053662|dbj|BAG35914.1| unnamed protein product [Homo sapiens]
Length = 276
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 79 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 138
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 139 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 168
>gi|378755066|gb|EHY65093.1| hypothetical protein NERG_01539 [Nematocida sp. 1 ERTm2]
Length = 263
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
EDA+C ICL+ Y + ++ LPC HHFH TCI +W ++ CPLCK
Sbjct: 204 EDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCK 249
>gi|355716769|gb|AES05717.1| ring finger protein 130 [Mustela putorius furo]
Length = 232
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 71 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 130
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 131 CKHVFHKSCVDPWLTEHCTCPMCKLNILKA 160
>gi|119574157|gb|EAW53772.1| ring finger protein 130, isoform CRA_a [Homo sapiens]
Length = 425
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 228 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 287
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 288 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 317
>gi|334311270|ref|XP_001381191.2| PREDICTED: e3 ubiquitin-protein ligase RNF130, partial [Monodelphis
domestica]
Length = 425
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 209 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDIVRILP 268
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 269 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 298
>gi|395736598|ref|XP_002816366.2| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Pongo abelii]
Length = 420
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 223 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 282
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 283 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 312
>gi|326928675|ref|XP_003210501.1| PREDICTED: e3 ubiquitin-protein ligase RNF130-like [Meleagris
gallopavo]
Length = 368
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K V T ++ P+ C +C+ SY+ + LP
Sbjct: 171 RYTSARDRNQRRLGDAAKKAVGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 230
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH C+ WL + TCP+CK NILK
Sbjct: 231 CKHVFHKACVDPWLSEHCTCPMCKLNILKA 260
>gi|297844460|ref|XP_002890111.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
gi|297335953|gb|EFH66370.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 112/301 (37%), Gaps = 96/301 (31%)
Query: 62 EERRADWGYSKPVVALDIMWNSAFVIVS-----AAMLIITI--NERPSTRIRLWICGYAL 114
++ +D G S +WN+ ++V+ A+++++T+ +E + W+ GY
Sbjct: 43 DDETSDEGASSSTRGCGSLWNTMELVVTLVQIVASLVVLTVAKDEHLQALLLTWVIGYTC 102
Query: 115 QCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRC 174
C+ + +++ + R+ R I + TR
Sbjct: 103 GCIANTLVLLLSCVRKYNR--------------------------IGVYSRTRIDGVMDA 136
Query: 175 ESINTMASFLWWIV-GFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+ F+ W+V G W+ G AP+LY L VVF+AF C+ A
Sbjct: 137 LKMGIECFFVVWLVLGILWICYGHSSP-SDAPKLYRLCVVFIAFS------CIRFA---- 185
Query: 234 IALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGG 293
YAV L G G GG
Sbjct: 186 --------------YAVL--------------------------LCAGEG------LRGG 199
Query: 294 YVANERILLPEDAECCICLSSY--EDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
+V + D CCICL Y E+G L L C+H FHS CI KWL++ ++CPLC+
Sbjct: 200 FVFQKP---SHDDCCCICLGKYGEEEGVALRKLECSHVFHSECIDKWLRIKSSCPLCQSQ 256
Query: 352 I 352
+
Sbjct: 257 V 257
>gi|395505318|ref|XP_003756989.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Sarcophilus
harrisii]
Length = 386
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 170 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDIVRILP 229
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 230 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 259
>gi|301771496|ref|XP_002921174.1| PREDICTED: goliath homolog, partial [Ailuropoda melanoleuca]
Length = 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 139 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 198
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 199 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 228
>gi|402873657|ref|XP_003900684.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Papio anubis]
Length = 488
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 291 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 350
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 351 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 380
>gi|429962863|gb|ELA42407.1| hypothetical protein VICG_00506 [Vittaforma corneae ATCC 50505]
Length = 248
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 73/291 (25%)
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
R L R + +V D++++ A ++ S +L IT N+ +++++ GY L C
Sbjct: 14 RTLASRITAISCIRTLVVTDLIFHGARILFSIFVLYITRNDIVEEPLKVFLTGYILLCAA 73
Query: 119 HVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESIN 178
+ + + F +N E EE + + F+ E N
Sbjct: 74 KAITFFSK---------------NSAFFHINRLPEYEESN------NGLAVFSNLVEGCN 112
Query: 179 TMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCC 238
W+I+G++W+ + Q P LY+ V++L ++G
Sbjct: 113 ----LFWYILGYHWLQQCENCS-QTHPLLYYTTVIWL---------------ILGF---- 148
Query: 239 CLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANE 298
++ + + + PK + V +ND + G
Sbjct: 149 -----VSYILPLVAIVLLLILVSYVKPKLKTVVFHNDSDIHDG----------------- 186
Query: 299 RILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
++ C IC +Y G+ + LPC+HHFH C+ +WL + TCPLCK
Sbjct: 187 ------NSRCVICYENYVPGSLVKFLPCDHHFHCECVDEWLNIRDTCPLCK 231
>gi|40850915|gb|AAH65244.1| RNF130 protein, partial [Homo sapiens]
Length = 306
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 109 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 168
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 169 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 198
>gi|426230192|ref|XP_004009163.1| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Ovis aries]
Length = 399
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 202 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 261
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 262 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 291
>gi|29788758|ref|NP_060904.2| E3 ubiquitin-protein ligase RNF130 precursor [Homo sapiens]
gi|332822823|ref|XP_001143540.2| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Pan troglodytes]
gi|56749089|sp|Q86XS8.1|GOLI_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF130; AltName:
Full=Goliath homolog; Short=H-Goliath; AltName:
Full=RING finger protein 130; Flags: Precursor
gi|29465722|gb|AAM08686.1| goliath protein [Homo sapiens]
gi|80478636|gb|AAI08307.1| Ring finger protein 130 [Homo sapiens]
gi|119574160|gb|EAW53775.1| ring finger protein 130, isoform CRA_d [Homo sapiens]
gi|383419949|gb|AFH33188.1| E3 ubiquitin-protein ligase RNF130 precursor [Macaca mulatta]
gi|410212496|gb|JAA03467.1| ring finger protein 130 [Pan troglodytes]
gi|410260084|gb|JAA18008.1| ring finger protein 130 [Pan troglodytes]
gi|410333717|gb|JAA35805.1| ring finger protein 130 [Pan troglodytes]
Length = 419
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|351714500|gb|EHB17419.1| Goliath-like protein, partial [Heterocephalus glaber]
Length = 335
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 142 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 201
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 202 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 231
>gi|281351797|gb|EFB27381.1| hypothetical protein PANDA_010019 [Ailuropoda melanoleuca]
Length = 333
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 140 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 199
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 200 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 229
>gi|440907942|gb|ELR58020.1| E3 ubiquitin-protein ligase RNF130, partial [Bos grunniens mutus]
Length = 396
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 203 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 262
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 263 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 292
>gi|355691932|gb|EHH27117.1| hypothetical protein EGK_17235, partial [Macaca mulatta]
gi|355750490|gb|EHH54828.1| hypothetical protein EGM_15744, partial [Macaca fascicularis]
Length = 334
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 141 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 200
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 201 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 230
>gi|354486505|ref|XP_003505421.1| PREDICTED: E3 ubiquitin-protein ligase RNF130-like [Cricetulus
griseus]
Length = 423
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 226 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 285
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 286 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 315
>gi|32425763|gb|AAH17100.2| RNF130 protein, partial [Homo sapiens]
Length = 418
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 221 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 280
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 281 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 310
>gi|410300528|gb|JAA28864.1| ring finger protein 130 [Pan troglodytes]
Length = 418
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 221 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 280
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 281 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 310
>gi|255568972|ref|XP_002525456.1| zinc finger protein, putative [Ricinus communis]
gi|223535269|gb|EEF36946.1| zinc finger protein, putative [Ricinus communis]
Length = 348
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
I + ++AEC +CL +E G E +PC H FHS CI+ WL+++++CP+C++ + N ++
Sbjct: 214 IAVEQNAECSVCLEEFEIGGEAKEMPCKHKFHSACILPWLELHSSCPVCRFQMPCDNSKI 273
>gi|195586623|ref|XP_002083073.1| GD24897 [Drosophila simulans]
gi|194195082|gb|EDX08658.1| GD24897 [Drosophila simulans]
Length = 510
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 266 KYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDGTE 320
++R+ +Q D++ V ++ I T G +++E+ L D++CC IC+ +Y+
Sbjct: 56 RFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKISDEKDL---DSDCCAICIEAYKPTDT 111
Query: 321 LHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 112 IRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 145
>gi|62089186|dbj|BAD93037.1| ring finger protein 130 variant [Homo sapiens]
Length = 401
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 239 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 298
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 299 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 328
>gi|345777428|ref|XP_531881.3| PREDICTED: E3 ubiquitin-protein ligase RNF130 isoform 1, partial
[Canis lupus familiaris]
Length = 348
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 151 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 210
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 211 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 240
>gi|345322798|ref|XP_001507054.2| PREDICTED: E3 ubiquitin-protein ligase RNF130-like [Ornithorhynchus
anatinus]
Length = 422
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 225 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 284
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 285 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 314
>gi|255537789|ref|XP_002509961.1| ring finger protein, putative [Ricinus communis]
gi|223549860|gb|EEF51348.1| ring finger protein, putative [Ricinus communis]
Length = 392
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 242 CIIAILYAVAGQEGASEADL--SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANER 299
CII + VAG+ G L S F Q + G+ G + + + R
Sbjct: 244 CIIGLGCYVAGRVGTYRRSLHSSTALNATFPRQPSMAVTGID-GATLELYPKTLLGESRR 302
Query: 300 ILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
+ P D C ICL Y+ L +P CNH+FH+ CI +WLKMNATCPLC+
Sbjct: 303 LPKPNDNTCPICLCEYQPKETLRTIPECNHYFHADCIDEWLKMNATCPLCR 353
>gi|119574158|gb|EAW53773.1| ring finger protein 130, isoform CRA_b [Homo sapiens]
Length = 384
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|384948188|gb|AFI37699.1| E3 ubiquitin-protein ligase RNF130 precursor [Macaca mulatta]
Length = 419
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|326673497|ref|XP_003199900.1| PREDICTED: e3 ubiquitin-protein ligase RNF128-like [Danio rerio]
Length = 400
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 264 LPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
L + + E++ EK +G ++ + TN V ++ D C +C SY+ G ++
Sbjct: 225 LRRQQMEIKRETEK-AIGKLEVRTLRTNDPEVDSD------DTGCVVCTDSYQRGEQVTV 277
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
LPC H +H CI WL + TCP+CKYNILK +
Sbjct: 278 LPCRHLYHKKCIEPWLLEHPTCPMCKYNILKSS 310
>gi|387597135|gb|EIJ94755.1| hypothetical protein NEPG_00279, partial [Nematocida parisii ERTm1]
Length = 263
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
EDA+C ICL+ Y + ++ LPC HHFH TCI +W ++ CPLCK
Sbjct: 204 EDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCK 249
>gi|291410148|ref|XP_002721367.1| PREDICTED: ring finger protein 130 [Oryctolagus cuniculus]
Length = 467
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>gi|145511035|ref|XP_001441445.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408695|emb|CAK74048.1| unnamed protein product [Paramecium tetraurelia]
Length = 395
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 301 LLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
L E +C IC+++YEDG EL LPC H FH CI +W K +TCP+CK +I +
Sbjct: 333 LSQEYKQCSICINNYEDGEELILLPCIHRFHKKCISEWFKNQSTCPICKTDITQ 386
>gi|387593481|gb|EIJ88505.1| hypothetical protein NEQG_01195 [Nematocida parisii ERTm3]
Length = 259
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
EDA+C ICL+ Y + ++ LPC HHFH TCI +W ++ CPLCK
Sbjct: 200 EDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCK 245
>gi|90441842|gb|AAI14473.1| RNF130 protein [Homo sapiens]
Length = 345
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 148 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 207
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 208 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 237
>gi|431892762|gb|ELK03195.1| Ras-GEF domain-containing family member 1C [Pteropus alecto]
Length = 818
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 625 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETEPDFDHCAVCIESYKQNDVVRILP 684
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 685 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 714
>gi|380805831|gb|AFE74791.1| E3 ubiquitin-protein ligase RNF130 precursor, partial [Macaca
mulatta]
Length = 373
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 215 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 274
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 275 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 304
>gi|344271622|ref|XP_003407636.1| PREDICTED: hypothetical protein LOC100662830 [Loxodonta africana]
Length = 1066
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 27/101 (26%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 984 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 1016
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+ +
Sbjct: 1017 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 1057
>gi|47211404|emb|CAF94220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 428
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +N+ L E C +
Sbjct: 346 AKPRGLTKADIEQLPSYRFNTENH---------------------------LSEQTLCVV 378
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 379 CFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 417
>gi|413942672|gb|AFW75321.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 318
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+C ICLS++ + + LPC HH+H+ C+ +WLK+N TCP+CKY +
Sbjct: 269 DCPICLSTFRNRETMITLPCRHHYHAACVTRWLKVNKTCPVCKYELF 315
>gi|168035662|ref|XP_001770328.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678359|gb|EDQ64818.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 252 GQEGASEADLSILP--KYRFEVQN--NDEKLGVGAGKMVPIETNGGYVANERI------- 300
G G S+ D+S LP Y+ VQ D+ G+ P E + + +
Sbjct: 257 GVAGMSDTDISRLPVRMYKGSVQKPAADQSQPSSKGEDPPCEEVVVDIVDASLESVDEGK 316
Query: 301 --LLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
++ E+ C +CL DG + LPC H FH+ CI +WLK ATCP+CK+ I
Sbjct: 317 QNVVEEELTCSVCLEQVVDGEIIRTLPCVHQFHAACIDQWLKQQATCPVCKFRI 370
>gi|6175860|gb|AAF05310.1|AF171875_1 g1-related zinc finger protein [Mus musculus]
Length = 419
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NIL+
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILRA 311
>gi|449474960|ref|XP_002195629.2| PREDICTED: E3 ubiquitin-protein ligase RNF130 [Taeniopygia guttata]
Length = 426
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 229 RYTSARDRNQRRLGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 288
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH C+ WL + TCP+CK NILK
Sbjct: 289 CKHVFHKVCVDPWLSEHCTCPMCKLNILKA 318
>gi|224005124|ref|XP_002296213.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586245|gb|ACI64930.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2172
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C ICL YEDG EL LPCNH+ H C+ WL N +CP C+Y++
Sbjct: 1962 CPICLVEYEDGDELRVLPCNHYMHKVCVDAWLGNNPSCPSCRYSL 2006
>gi|428174673|gb|EKX43567.1| hypothetical protein GUITHDRAFT_153208 [Guillardia theta CCMP2712]
Length = 355
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 279 GVGAGKMVPIETNGGYVANERIL-LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVK 337
GV + + +P+ T + ++I+ E+ EC ICL YE G E+ LPC H FHS C K
Sbjct: 169 GVHSHEELPVYT----IQEDQIVNFEENPECLICLCEYEVGQEVKILPCLHQFHSNCASK 224
Query: 338 WLKMNATCPLCKYNILKGNEQ 358
WL + CP+CK +I G Q
Sbjct: 225 WLSESHFCPVCKISIRTGKTQ 245
>gi|255081262|ref|XP_002507853.1| predicted protein [Micromonas sp. RCC299]
gi|226523129|gb|ACO69111.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 283 GKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLKM 341
G M P + GG +E +P CC +CL EDG + LPC H +H+ CI KWL
Sbjct: 330 GAMDPSGSPGGGPEHECSQVP----CCSVCLCDAEDGDAMRTLPCMHVYHADCIDKWLGE 385
Query: 342 NATCPLCKYNILKGN 356
++TCP+CK+++ +G+
Sbjct: 386 HSTCPICKHDVREGS 400
>gi|410914174|ref|XP_003970563.1| PREDICTED: RING finger protein 44-like [Takifugu rubripes]
Length = 440
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +N+ L E C +
Sbjct: 358 AKPRGLTKADIEQLPSYRFNAENH---------------------------LSEQTLCVV 390
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 391 CFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 429
>gi|194886971|ref|XP_001976721.1| GG19861 [Drosophila erecta]
gi|190659908|gb|EDV57121.1| GG19861 [Drosophila erecta]
Length = 616
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G +++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKISDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|449267160|gb|EMC78126.1| Goliath like protein, partial [Columba livia]
Length = 387
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 194 RYTSARDRNQRRLGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 253
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH C+ WL + TCP+CK NILK
Sbjct: 254 CKHVFHKACVDPWLSEHCTCPMCKLNILKA 283
>gi|224075100|ref|XP_002304557.1| predicted protein [Populus trichocarpa]
gi|222841989|gb|EEE79536.1| predicted protein [Populus trichocarpa]
Length = 385
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 299 RILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
R+ P D C ICLS Y+ L +P C+H+FH+ CI +WLKMNATCPLC+
Sbjct: 307 RLPKPNDNTCPICLSEYQPKDTLRTIPDCSHYFHANCIDEWLKMNATCPLCR 358
>gi|443683311|gb|ELT87610.1| hypothetical protein CAPTEDRAFT_209816 [Capitella teleta]
Length = 404
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 33/51 (64%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C ICL YE+ EL LPC H FH C+ WL N+TCPLC YNI++ E+
Sbjct: 88 CAICLEEYEEKQELRILPCQHEFHRVCVDPWLIANSTCPLCLYNIIEPPEE 138
>gi|405967974|gb|EKC33083.1| Protein regulator of cytokinesis 1 [Crassostrea gigas]
Length = 1813
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 25/99 (25%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A +G ++ ++ LP YRF +N+ + + C +
Sbjct: 1729 AKPKGLTKPEIEQLPAYRFNKENHHSDM-------------------------DQTSCVV 1763
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E+ L LPC+H FH+ C+ KWLK N TCP+C+
Sbjct: 1764 CMCDFENRQLLRVLPCSHEFHAKCVDKWLKTNRTCPICR 1802
>gi|195655383|gb|ACG47159.1| protein binding protein [Zea mays]
Length = 271
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+C ICLS++ + + LPC HH+H+ C+ +WLK+N TCP+CKY +
Sbjct: 222 DCPICLSTFRNRETMITLPCRHHYHAACVTRWLKVNKTCPVCKYELF 268
>gi|413947493|gb|AFW80142.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 459
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 39 LGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITIN 98
L R +GR GPSMLV E AA +L+ RR DW +S+PV+ALDI WN AF +AAML +
Sbjct: 106 LPRTSGR-RGPSMLVHEMAALQLQRRRVDWAHSRPVLALDIAWNVAFTAAAAAMLSSSAE 164
Query: 99 ERPSTRIRLWI 109
E P + LW+
Sbjct: 165 ESPIKPLHLWV 175
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 57 AARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
AA +L+ RR DW +S+PV+ALDI WN AF +AAML + E P + LW+
Sbjct: 2 AALQLQRRRVDWAHSRPVLALDIAWNVAFAATAAAMLSSSAEESPIKPLHLWV 54
>gi|134024402|gb|AAI35902.1| LOC100124963 protein [Xenopus (Silurana) tropicalis]
Length = 424
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 227 RYTSARDRNQRRLGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDIVRVLP 286
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH C+ WL + TCP+CK NILK
Sbjct: 287 CKHVFHKVCVDPWLSEHCTCPMCKLNILKA 316
>gi|195353364|ref|XP_002043175.1| GM11764 [Drosophila sechellia]
gi|194127263|gb|EDW49306.1| GM11764 [Drosophila sechellia]
Length = 611
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G +++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKISDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|166795941|ref|NP_001107712.1| ring finger protein 130 precursor [Xenopus (Silurana) tropicalis]
gi|159155407|gb|AAI54846.1| LOC100124963 protein [Xenopus (Silurana) tropicalis]
Length = 419
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTSARDRNQRRLGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDIVRVLP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKVCVDPWLSEHCTCPMCKLNILKA 311
>gi|226505342|ref|NP_001148879.1| protein binding protein [Zea mays]
gi|195622886|gb|ACG33273.1| protein binding protein [Zea mays]
Length = 268
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+C ICLS++ + + LPC HH+H+ C+ +WLK+N TCP+CKY +
Sbjct: 219 DCPICLSTFRNRETMITLPCRHHYHAACVTRWLKVNKTCPVCKYELF 265
>gi|301119555|ref|XP_002907505.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106017|gb|EEY64069.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 551
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 290 TNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
T+ G + NE I C ICL +EDG ++ LPC H FH CI +WLK N +CP+CK
Sbjct: 470 TSVGSIENEDI-------CPICLIEFEDGEDVRNLPCKHIFHVACIDEWLKRNTSCPMCK 522
Query: 350 YNI 352
N+
Sbjct: 523 SNV 525
>gi|195489910|ref|XP_002092938.1| GE11386 [Drosophila yakuba]
gi|194179039|gb|EDW92650.1| GE11386 [Drosophila yakuba]
Length = 616
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G +++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKISDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|428174163|gb|EKX43061.1| hypothetical protein GUITHDRAFT_61154, partial [Guillardia theta
CCMP2712]
Length = 73
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 24/97 (24%)
Query: 256 ASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSY 315
ASE +S LP RFE G G+G+ E ECCICL Y
Sbjct: 1 ASEGQISRLPFERFEPAT-----GKGSGE-------------------EATECCICLCEY 36
Query: 316 EDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ G +L LPC H FHS C+ +WL N CP+CK +I
Sbjct: 37 DVGEKLRKLPCLHRFHSVCVDRWLLSNKMCPICKESI 73
>gi|348516749|ref|XP_003445900.1| PREDICTED: RING finger protein 44-like [Oreochromis niloticus]
Length = 440
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +N+ L E C +
Sbjct: 358 AKPRGLTKADIEQLPSYRFNSENH---------------------------LSEQTLCVV 390
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 391 CFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 429
>gi|432879090|ref|XP_004073447.1| PREDICTED: RING finger protein 44-like [Oryzias latipes]
Length = 440
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +N+ L E C +
Sbjct: 358 AKPRGLTKADIEQLPSYRFNSENH---------------------------LSEQTLCVV 390
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 391 CFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 429
>gi|332228405|ref|XP_003263380.1| PREDICTED: RING finger protein 38 isoform 1 [Nomascus leucogenys]
Length = 724
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 642 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 674
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 675 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 713
>gi|224098884|ref|XP_002311305.1| predicted protein [Populus trichocarpa]
gi|222851125|gb|EEE88672.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+D EC ICL +E G + +PC H FH C+ KWLK++ CP+C+Y + E++
Sbjct: 111 KDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEEL 166
>gi|118489087|gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 225
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+D EC ICL +E G + +PC H FH C+ KWLK++ CP+C+Y + E++
Sbjct: 111 KDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEEL 166
>gi|332228409|ref|XP_003263382.1| PREDICTED: RING finger protein 38 isoform 3 [Nomascus leucogenys]
Length = 674
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 592 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 624
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 625 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 663
>gi|395531850|ref|XP_003767986.1| PREDICTED: RING finger protein 43 [Sarcophilus harrisii]
Length = 778
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + DG EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 271 CAICLEEFTDGQELRVISCRHEFHRTCVDPWLHQHQTCPLCMFNIIEGD 319
>gi|357478447|ref|XP_003609509.1| RING finger protein [Medicago truncatula]
gi|355510564|gb|AES91706.1| RING finger protein [Medicago truncatula]
Length = 545
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 305 DAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
DAE C ICL+ YEDG ++ LPC H +H +C+ KWLK ++ CPLC+ N+ G
Sbjct: 480 DAEQCYICLAEYEDGDQIRVLPCKHEYHMSCVDKWLKEIHGVCPLCRSNVCGG 532
>gi|195154835|ref|XP_002018318.1| GL16830 [Drosophila persimilis]
gi|194114114|gb|EDW36157.1| GL16830 [Drosophila persimilis]
Length = 737
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G +++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKISDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|355750449|gb|EHH54787.1| hypothetical protein EGM_15690 [Macaca fascicularis]
Length = 299
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 27/101 (26%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N D + +E+ L C +
Sbjct: 217 AKPRGLTKADIEQLPSYRF---NPDSR------------------QSEQTL------CVV 249
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
C S +E L LPCNH FH+ C+ KWLK N TCP+C+ +
Sbjct: 250 CFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 290
>gi|357517417|ref|XP_003628997.1| RING finger protein [Medicago truncatula]
gi|355523019|gb|AET03473.1| RING finger protein [Medicago truncatula]
Length = 503
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 304 EDA-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
EDA +C ICL Y DG + LPCNH FH TCI KWLK ++ CPLC+ NI N
Sbjct: 440 EDATQCYICLVEYNDGDSVRVLPCNHEFHRTCIDKWLKEIHRVCPLCRGNICISN 494
>gi|198458748|ref|XP_001361150.2| GA15425 [Drosophila pseudoobscura pseudoobscura]
gi|198136449|gb|EAL25727.2| GA15425 [Drosophila pseudoobscura pseudoobscura]
Length = 694
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G +++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKISDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|195380427|ref|XP_002048972.1| GJ21338 [Drosophila virilis]
gi|194143769|gb|EDW60165.1| GJ21338 [Drosophila virilis]
Length = 743
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G + +E+ L D++CC IC+ SY+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKMTDEKDL---DSDCCAICIESYKPA 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DIIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|402896963|ref|XP_003911547.1| PREDICTED: RING finger protein 38 isoform 1 [Papio anubis]
Length = 586
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 504 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 536
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 537 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 575
>gi|328772613|gb|EGF82651.1| hypothetical protein BATDEDRAFT_86130 [Batrachochytrium
dendrobatidis JAM81]
Length = 496
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
++ PED ECC+C Y+ LPC H FH CI WLK+N TCP+C+Y+++ ++
Sbjct: 311 DKATFPED-ECCVCQEGYKHDEITIELPCKHVFHPLCITSWLKLNGTCPVCRYSLVDNSD 369
>gi|118486636|gb|ABK95155.1| unknown [Populus trichocarpa]
Length = 212
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
+D EC ICL +E G + +PC H FH C+ KWLK++ CP+C+Y + E++
Sbjct: 98 KDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVDEEEL 153
>gi|449497659|ref|XP_004160464.1| PREDICTED: uncharacterized protein LOC101230046 [Cucumis sativus]
Length = 248
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 240 LPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANER 299
P + AI + + G E D S + +Q + G ++ + G +
Sbjct: 70 FPRLPAISPPIVQRWGFEETDASWI-----TLQFPRPAVNSGIEEIPRVRITGKH----- 119
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
L +D+ C IC +E G E+ LPC H +HS C+V WL+M+ TCP+C+Y +
Sbjct: 120 --LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTL 170
>gi|268569244|ref|XP_002640470.1| Hypothetical protein CBG13603 [Caenorhabditis briggsae]
Length = 502
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ED C +CL+++E G + LPCNH FH CI KWL +N CP+C+ I
Sbjct: 433 EDDTCTVCLNNFEAGESIRKLPCNHLFHPECIYKWLDINKKCPMCREEI 481
>gi|297295801|ref|XP_001091221.2| PREDICTED: RING finger protein 44-like [Macaca mulatta]
Length = 432
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N D + E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRF---NPDSRQS------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|124504949|ref|XP_001351216.1| zinc finger protein, putative [Plasmodium falciparum 3D7]
gi|4493935|emb|CAB38971.1| zinc finger protein, putative [Plasmodium falciparum 3D7]
Length = 1181
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+CCIC +Y+ + LPC H+FH CI+KW+ N TCPLCK ++
Sbjct: 1130 KCCICCENYQHNDNVIFLPCTHNFHKQCILKWISKNTTCPLCKIDL 1175
>gi|383149297|gb|AFG56541.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149299|gb|AFG56542.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149301|gb|AFG56543.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149303|gb|AFG56544.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149305|gb|AFG56545.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149307|gb|AFG56546.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149309|gb|AFG56547.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149311|gb|AFG56548.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149315|gb|AFG56550.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149317|gb|AFG56551.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149319|gb|AFG56552.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149321|gb|AFG56553.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149323|gb|AFG56554.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149325|gb|AFG56555.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149327|gb|AFG56556.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149329|gb|AFG56557.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ G +E +E L + ++C +CL +E G+E +PC H F
Sbjct: 29 AENDANHYGTPPASRSAVEAMAAVKISEGHLRSDLSQCAVCLEEFEVGSEAREMPCKHMF 88
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
HS CI WLK++++CP+C+Y +
Sbjct: 89 HSDCIQPWLKLHSSCPVCRYQM 110
>gi|402896967|ref|XP_003911549.1| PREDICTED: RING finger protein 38 isoform 3 [Papio anubis]
Length = 502
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 420 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 452
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 453 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 491
>gi|301767068|ref|XP_002918936.1| PREDICTED: RING finger protein 38-like [Ailuropoda melanoleuca]
Length = 572
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 490 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 522
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 523 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 561
>gi|147812656|emb|CAN68374.1| hypothetical protein VITISV_033239 [Vitis vinifera]
Length = 306
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
Y +++ E A+C ICL YE+G + LPC+H FH TC+ KWLK ++ CPLC+ +I
Sbjct: 233 YDKSQKHQNDEAAQCYICLVEYEEGDNMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDI 292
Query: 353 LKGNEQ 358
+ +Q
Sbjct: 293 CRSVQQ 298
>gi|363739122|ref|XP_003642121.1| PREDICTED: RING finger protein 44-like [Gallus gallus]
Length = 498
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +++ E C +
Sbjct: 416 AKPRGLTKADIEHLPSYRFNPESHQS---------------------------EQTLCVV 448
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 449 CFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 487
>gi|355691874|gb|EHH27059.1| hypothetical protein EGK_17168 [Macaca mulatta]
Length = 350
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 27/101 (26%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N D + E C +
Sbjct: 268 AKPRGLTKADIEQLPSYRF---NPDSRQS------------------------EQTLCVV 300
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
C S +E L LPCNH FH+ C+ KWLK N TCP+C+ +
Sbjct: 301 CFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 341
>gi|2982466|emb|CAA18230.1| putative protein [Arabidopsis thaliana]
gi|7269492|emb|CAB79495.1| putative protein [Arabidopsis thaliana]
Length = 344
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
+ + E +C ICL ++ G+E +PC H FH CIV WL+++++CP+C+Y + +E
Sbjct: 221 VKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDE 278
>gi|18397866|ref|NP_565376.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|20197705|gb|AAD17402.2| putative RING-H2 zinc finger protein [Arabidopsis thaliana]
gi|21594677|gb|AAM66032.1| putative RING-H2 zinc finger protein [Arabidopsis thaliana]
gi|66865916|gb|AAY57592.1| RING finger family protein [Arabidopsis thaliana]
gi|149944335|gb|ABR46210.1| At2g15580 [Arabidopsis thaliana]
gi|222423846|dbj|BAH19888.1| AT2G15580 [Arabidopsis thaliana]
gi|330251325|gb|AEC06419.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 196
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 261 LSILPKYRFEVQNNDEKLGVGAGKMV---PIETNGGYVANERIL------LPEDAECCIC 311
L I P+ R ++ KL G GK + P E G + R++ + E +C IC
Sbjct: 94 LRIPPRTRQNGKDKGNKLEQGKGKPLGDLPTEVVGLKKSRGRLMEWFKRRVREQQDCAIC 153
Query: 312 LSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
L ++ G L LPC H FHS C++ WL N CP C+ +I
Sbjct: 154 LDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>gi|125533314|gb|EAY79862.1| hypothetical protein OsI_35023 [Oryza sativa Indica Group]
Length = 218
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
EC +CLS +E+ L +PCNH FH C+ +WL+ + CPLC+Y + K +
Sbjct: 164 ECAVCLSDFEEKDRLRTMPCNHSFHENCLFRWLRDSCLCPLCRYALPKQQQ 214
>gi|77548567|gb|ABA91364.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
gi|108863973|gb|ABG22353.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
gi|125576148|gb|EAZ17370.1| hypothetical protein OsJ_32893 [Oryza sativa Japonica Group]
gi|125576151|gb|EAZ17373.1| hypothetical protein OsJ_32896 [Oryza sativa Japonica Group]
Length = 218
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
EC +CLS +E+ L +PCNH FH C+ +WL+ + CPLC+Y + K +
Sbjct: 164 ECAVCLSDFEEKDRLRTMPCNHSFHENCLFRWLRDSCLCPLCRYALPKQQQ 214
>gi|4959044|gb|AAD34209.1|AF069992_1 LIM domain interacting RING finger protein [Mus musculus]
Length = 600
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H FH CI +WL N+TCP+C+ +L GN +
Sbjct: 546 CSVCITEYTEGDKLRKLPCSHEFHVHCIDRWLSENSTCPICRRAVLSSGNRE 597
>gi|357484513|ref|XP_003612544.1| RING finger protein [Medicago truncatula]
gi|355513879|gb|AES95502.1| RING finger protein [Medicago truncatula]
Length = 560
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
E +C ICL YEDG + LPC+H FH+TCI KWLK ++ CPLC+ +I
Sbjct: 501 EPVQCYICLVEYEDGDSMRVLPCHHEFHTTCIDKWLKEVHRVCPLCRGDI 550
>gi|363744649|ref|XP_424864.3| PREDICTED: RING finger protein 38 [Gallus gallus]
Length = 468
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 388 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 420
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 421 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 459
>gi|383149313|gb|AFG56549.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ G +E ++ L + ++C +CL +E G+E +PC H F
Sbjct: 29 AENDANHYGTPPASRSAVEAMAAVKISQEHLSSDLSQCAVCLEEFEVGSEAREMPCKHMF 88
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
HS CI WLK++++CP+C+Y +
Sbjct: 89 HSDCIQPWLKLHSSCPVCRYQM 110
>gi|348521174|ref|XP_003448101.1| PREDICTED: RING finger protein 38-like [Oreochromis niloticus]
Length = 742
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 660 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 692
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 693 CMCDFESRQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 731
>gi|395514395|ref|XP_003761403.1| PREDICTED: RING finger protein 38 [Sarcophilus harrisii]
Length = 224
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 142 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 174
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 175 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 213
>gi|169641968|gb|AAI60676.1| Unknown (protein for IMAGE:8330050) [Xenopus laevis]
Length = 508
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 426 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 458
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 459 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 497
>gi|449464484|ref|XP_004149959.1| PREDICTED: uncharacterized protein LOC101218727 [Cucumis sativus]
Length = 249
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 240 LPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANER 299
P + AI + + G E D S + +Q + G ++ + G +
Sbjct: 70 FPRLPAISPPIVQRWGFEETDASWI-----TLQFPRPAVNSGIEEIPRVRITGKH----- 119
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
L +D+ C IC +E G E+ LPC H +HS C++ WL+M+ TCP+C+Y +
Sbjct: 120 --LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTL 170
>gi|395505163|ref|XP_003756914.1| PREDICTED: RING finger protein 44 isoform 1 [Sarcophilus harrisii]
Length = 438
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +++ E C +
Sbjct: 356 AKPRGLTKADIEQLPSYRFNPESHQS---------------------------EQTLCVV 388
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 389 CFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 427
>gi|351711776|gb|EHB14695.1| RING finger protein 38 [Heterocephalus glaber]
Length = 428
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 346 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 378
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 379 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 417
>gi|350579371|ref|XP_003480597.1| PREDICTED: RING finger protein 38 isoform 2 [Sus scrofa]
Length = 466
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 384 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 416
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 417 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 455
>gi|355567624|gb|EHH23965.1| RING finger protein 38, partial [Macaca mulatta]
gi|355753195|gb|EHH57241.1| RING finger protein 38, partial [Macaca fascicularis]
Length = 512
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 430 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 462
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 463 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 501
>gi|332228407|ref|XP_003263381.1| PREDICTED: RING finger protein 38 isoform 2 [Nomascus leucogenys]
Length = 511
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 429 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 461
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 462 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 500
>gi|355716966|gb|AES05780.1| ring finger protein 44 [Mustela putorius furo]
Length = 431
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|395823842|ref|XP_003785186.1| PREDICTED: RING finger protein 38 isoform 1 [Otolemur garnettii]
gi|395823844|ref|XP_003785187.1| PREDICTED: RING finger protein 38 isoform 2 [Otolemur garnettii]
gi|395823846|ref|XP_003785188.1| PREDICTED: RING finger protein 38 isoform 3 [Otolemur garnettii]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|390458123|ref|XP_002743126.2| PREDICTED: RING finger protein 38 isoform 1 [Callithrix jacchus]
gi|403306612|ref|XP_003943819.1| PREDICTED: RING finger protein 38 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 515
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 433 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 465
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 466 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|403306616|ref|XP_003943821.1| PREDICTED: RING finger protein 38 isoform 3 [Saimiri boliviensis
boliviensis]
gi|403306618|ref|XP_003943822.1| PREDICTED: RING finger protein 38 isoform 4 [Saimiri boliviensis
boliviensis]
gi|403306620|ref|XP_003943823.1| PREDICTED: RING finger protein 38 isoform 5 [Saimiri boliviensis
boliviensis]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|195058128|ref|XP_001995393.1| GH23135 [Drosophila grimshawi]
gi|193899599|gb|EDV98465.1| GH23135 [Drosophila grimshawi]
Length = 745
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 279 GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDGTELHALPCNHHFHSTCIVK 337
V ++ I T G + +E+ L D++CC IC+ SY+ + LPC H FH CI
Sbjct: 278 SVTKKAIMKIPTKTGKMTDEKDL---DSDCCAICIESYKPADIIRILPCKHEFHKNCIDP 334
Query: 338 WLKMNATCPLCKYNILK 354
WL + TCP+CK ++LK
Sbjct: 335 WLIEHRTCPMCKLDVLK 351
>gi|294461394|gb|ADE76258.1| unknown [Picea sitchensis]
Length = 541
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 287 PIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATC 345
PI + NE + E A+C ICL+ YE+G ++ LPC+H +H C+ KWLK ++ C
Sbjct: 463 PIRNHKNPEKNENVN-DEAAQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHRVC 521
Query: 346 PLCKYNILKGN 356
PLC+ N+ + N
Sbjct: 522 PLCRGNVCEQN 532
>gi|37577175|ref|NP_073618.3| RING finger protein 38 isoform 1 [Homo sapiens]
gi|297270600|ref|XP_002800138.1| PREDICTED: RING finger protein 38 isoform 3 [Macaca mulatta]
gi|297684041|ref|XP_002819666.1| PREDICTED: RING finger protein 38 isoform 1 [Pongo abelii]
gi|397519528|ref|XP_003829910.1| PREDICTED: RING finger protein 38 isoform 1 [Pan paniscus]
gi|426361761|ref|XP_004048068.1| PREDICTED: RING finger protein 38 isoform 1 [Gorilla gorilla
gorilla]
gi|56749664|sp|Q9H0F5.4|RNF38_HUMAN RecName: Full=RING finger protein 38
Length = 515
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 433 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 465
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 466 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|361067921|gb|AEW08272.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ G +E ++ L + ++C +CL +E G+E +PC H F
Sbjct: 29 AENDANHYGTPPASRSAVEAMAAVKISQEHLSSDLSQCAVCLEEFELGSEAREMPCKHMF 88
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
HS CI WLK++++CP+C+Y +
Sbjct: 89 HSDCIQPWLKLHSSCPVCRYQM 110
>gi|37577177|ref|NP_919309.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|37577181|ref|NP_919311.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|37577185|ref|NP_919313.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|297270598|ref|XP_002800137.1| PREDICTED: RING finger protein 38 isoform 2 [Macaca mulatta]
gi|297270604|ref|XP_002800140.1| PREDICTED: RING finger protein 38 isoform 5 [Macaca mulatta]
gi|297270606|ref|XP_002800141.1| PREDICTED: RING finger protein 38 isoform 6 [Macaca mulatta]
gi|297270608|ref|XP_001082059.2| PREDICTED: RING finger protein 38 isoform 1 [Macaca mulatta]
gi|297270610|ref|XP_002800142.1| PREDICTED: RING finger protein 38 isoform 7 [Macaca mulatta]
gi|297684045|ref|XP_002819668.1| PREDICTED: RING finger protein 38 isoform 3 [Pongo abelii]
gi|297684047|ref|XP_002819669.1| PREDICTED: RING finger protein 38 isoform 4 [Pongo abelii]
gi|332228411|ref|XP_003263383.1| PREDICTED: RING finger protein 38 isoform 4 [Nomascus leucogenys]
gi|397519530|ref|XP_003829911.1| PREDICTED: RING finger protein 38 isoform 2 [Pan paniscus]
gi|402896965|ref|XP_003911548.1| PREDICTED: RING finger protein 38 isoform 2 [Papio anubis]
gi|402896969|ref|XP_003911550.1| PREDICTED: RING finger protein 38 isoform 4 [Papio anubis]
gi|402896971|ref|XP_003911551.1| PREDICTED: RING finger protein 38 isoform 5 [Papio anubis]
gi|426361765|ref|XP_004048070.1| PREDICTED: RING finger protein 38 isoform 3 [Gorilla gorilla
gorilla]
gi|426361767|ref|XP_004048071.1| PREDICTED: RING finger protein 38 isoform 4 [Gorilla gorilla
gorilla]
gi|426361769|ref|XP_004048072.1| PREDICTED: RING finger protein 38 isoform 5 [Gorilla gorilla
gorilla]
gi|21666412|gb|AAM73697.1|AF394047_1 RING finger protein 38 [Homo sapiens]
gi|67968671|dbj|BAE00694.1| unnamed protein product [Macaca fascicularis]
gi|119578709|gb|EAW58305.1| ring finger protein 38 [Homo sapiens]
gi|123997119|gb|ABM86161.1| ring finger protein 38 [synthetic construct]
gi|157928809|gb|ABW03690.1| ring finger protein 38 [synthetic construct]
gi|380785195|gb|AFE64473.1| RING finger protein 38 isoform 1 [Macaca mulatta]
gi|380785197|gb|AFE64474.1| RING finger protein 38 isoform 1 [Macaca mulatta]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|45382265|ref|NP_990159.1| E3 ubiquitin-protein ligase RLIM [Gallus gallus]
gi|4959046|gb|AAD34210.1|AF069993_1 LIM domain interacting RING finger protein [Gallus gallus]
Length = 593
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 539 CSVCITEYTEGNKLRKLPCSHEYHVHCIARWLSENSTCPICRRAVLASGNRE 590
>gi|356529795|ref|XP_003533473.1| PREDICTED: uncharacterized protein LOC100786091 [Glycine max]
Length = 567
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
E +C ICL YEDG + LPC+H FH+TC+ KWLK ++ CPLC+ +I
Sbjct: 508 EPVQCYICLVEYEDGDSMRVLPCHHEFHTTCVDKWLKEIHRVCPLCRGDI 557
>gi|343958212|dbj|BAK62961.1| hypothetical protein [Pan troglodytes]
Length = 332
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 250 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 282
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 283 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 321
>gi|410042605|ref|XP_003951472.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
Length = 515
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 433 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 465
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 466 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|224067536|ref|XP_002197442.1| PREDICTED: RING finger protein 44 [Taeniopygia guttata]
Length = 442
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +++ E C +
Sbjct: 360 AKPRGLTKADIEHLPSYRFNPESHQS---------------------------EQTLCVV 392
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 393 CFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 431
>gi|50949355|emb|CAB66751.3| hypothetical protein [Homo sapiens]
Length = 515
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 433 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 465
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 466 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|332831902|ref|XP_003312128.1| PREDICTED: RING finger protein 38 isoform 1 [Pan troglodytes]
gi|332831904|ref|XP_528602.3| PREDICTED: RING finger protein 38 isoform 6 [Pan troglodytes]
gi|332831906|ref|XP_003312130.1| PREDICTED: RING finger protein 38 isoform 3 [Pan troglodytes]
gi|410042607|ref|XP_003951473.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|410042610|ref|XP_003951474.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|410042612|ref|XP_003951475.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|343961087|dbj|BAK62133.1| hypothetical protein [Pan troglodytes]
gi|343961287|dbj|BAK62233.1| hypothetical protein [Pan troglodytes]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|195640466|gb|ACG39701.1| protein binding protein [Zea mays]
Length = 268
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+C ICLS++ + + LPC HH+H+ C+ KWL++N TCP+CKY +
Sbjct: 219 DCPICLSTFRNRETMITLPCMHHYHAACVTKWLRVNKTCPVCKYELF 265
>gi|193787520|dbj|BAG52726.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 357 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 389
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 390 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 428
>gi|77736109|ref|NP_001029753.1| RING finger protein 38 [Bos taurus]
gi|426220204|ref|XP_004004306.1| PREDICTED: RING finger protein 38 isoform 1 [Ovis aries]
gi|426220206|ref|XP_004004307.1| PREDICTED: RING finger protein 38 isoform 2 [Ovis aries]
gi|74355024|gb|AAI02725.1| Ring finger protein 38 [Bos taurus]
gi|296484700|tpg|DAA26815.1| TPA: ring finger protein 38 [Bos taurus]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|390458125|ref|XP_003732059.1| PREDICTED: RING finger protein 38 isoform 2 [Callithrix jacchus]
gi|403306614|ref|XP_003943820.1| PREDICTED: RING finger protein 38 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 465
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 383 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 415
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 416 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|355716933|gb|AES05771.1| ring finger protein 38 [Mustela putorius furo]
Length = 460
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 379 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 411
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 412 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 450
>gi|73971363|ref|XP_866889.1| PREDICTED: RING finger protein 38 isoform 5 [Canis lupus
familiaris]
gi|410978605|ref|XP_003995680.1| PREDICTED: RING finger protein 38 isoform 1 [Felis catus]
gi|410978607|ref|XP_003995681.1| PREDICTED: RING finger protein 38 isoform 2 [Felis catus]
gi|410978609|ref|XP_003995682.1| PREDICTED: RING finger protein 38 isoform 3 [Felis catus]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179|ref|NP_919310.1| RING finger protein 38 isoform 3 [Homo sapiens]
gi|297270602|ref|XP_002800139.1| PREDICTED: RING finger protein 38 isoform 4 [Macaca mulatta]
gi|297684043|ref|XP_002819667.1| PREDICTED: RING finger protein 38 isoform 2 [Pongo abelii]
gi|397519532|ref|XP_003829912.1| PREDICTED: RING finger protein 38 isoform 3 [Pan paniscus]
gi|426361763|ref|XP_004048069.1| PREDICTED: RING finger protein 38 isoform 2 [Gorilla gorilla
gorilla]
gi|54673576|gb|AAH33786.2| Ring finger protein 38 [Homo sapiens]
gi|117646890|emb|CAL37560.1| hypothetical protein [synthetic construct]
Length = 465
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 383 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 415
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 416 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|10437428|dbj|BAB15050.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 250 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 282
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 283 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 321
>gi|402873505|ref|XP_003900614.1| PREDICTED: RING finger protein 44 isoform 1 [Papio anubis]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|332831908|ref|XP_003312131.1| PREDICTED: RING finger protein 38 isoform 4 [Pan troglodytes]
Length = 465
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 383 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 415
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 416 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|18405411|ref|NP_564693.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15983408|gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|4204263|gb|AAD10644.1| Unknown protein [Arabidopsis thaliana]
gi|14517546|gb|AAK62663.1| At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|23308203|gb|AAN18071.1| At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|332195138|gb|AEE33259.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 351
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ + E +C +CL +E GTE +PC H FHS C++ WL+++++CP+C+Y +
Sbjct: 215 VKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQL 267
>gi|356560853|ref|XP_003548701.1| PREDICTED: uncharacterized protein LOC100800896 [Glycine max]
Length = 581
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
A+C ICL YEDG + LPC+H FH TCI KWLK ++ CPLC+ +I
Sbjct: 521 AQCYICLVEYEDGDNMRVLPCHHEFHRTCIDKWLKEIHRVCPLCRGDI 568
>gi|340376446|ref|XP_003386743.1| PREDICTED: e3 ubiquitin-protein ligase RNF115-like [Amphimedon
queenslandica]
Length = 250
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
++EC IC ++ E LPC H FHS CIV WLK+ TCP C+YN+ KG
Sbjct: 196 ESECSICKETFVLNDEYKELPCTHIFHSHCIVAWLKLRGTCPTCRYNLNKGQ 247
>gi|332831910|ref|XP_003312132.1| PREDICTED: RING finger protein 38 isoform 5 [Pan troglodytes]
Length = 465
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 383 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 415
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 416 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|311249623|ref|XP_003123707.1| PREDICTED: RING finger protein 44 isoform 1 [Sus scrofa]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFHPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|22328949|ref|NP_194370.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30687206|ref|NP_849554.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|20466682|gb|AAM20658.1| putative protein [Arabidopsis thaliana]
gi|23198194|gb|AAN15624.1| putative protein [Arabidopsis thaliana]
gi|222424453|dbj|BAH20182.1| AT4G26400 [Arabidopsis thaliana]
gi|332659793|gb|AEE85193.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659794|gb|AEE85194.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 356
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
+ + E +C ICL ++ G+E +PC H FH CIV WL+++++CP+C+Y + +E
Sbjct: 233 VKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDE 290
>gi|443735062|gb|ELU18917.1| hypothetical protein CAPTEDRAFT_226797 [Capitella teleta]
Length = 613
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 301 LLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
LL +D C ICL S+E E LPC HHFH+ CI WLK + TCP+C++
Sbjct: 558 LLEKDNTCPICLCSFEISEEAKILPCQHHFHTLCIQAWLKKSGTCPVCRH 607
>gi|71896429|ref|NP_001025505.1| ring finger protein 38 [Xenopus (Silurana) tropicalis]
Length = 464
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 382 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 414
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 415 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 453
>gi|350579369|ref|XP_003480596.1| PREDICTED: RING finger protein 38 isoform 1 [Sus scrofa]
Length = 432
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|417411347|gb|JAA52113.1| Putative ring finger protein 38, partial [Desmodus rotundus]
Length = 518
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 436 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 468
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 469 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 507
>gi|348504004|ref|XP_003439552.1| PREDICTED: hypothetical protein LOC100690522 [Oreochromis
niloticus]
Length = 415
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
+ +C IC Y++G +L LPC H +H CI +WLK N TCP+C+ N+ G+
Sbjct: 355 NTQCQICFCDYDNGEKLRMLPCFHDYHVQCIDRWLKDNTTCPICRANLADGD 406
>gi|194756348|ref|XP_001960441.1| GF11510 [Drosophila ananassae]
gi|190621739|gb|EDV37263.1| GF11510 [Drosophila ananassae]
Length = 628
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G +++E+ + D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKISDEKDV---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|397519534|ref|XP_003829913.1| PREDICTED: RING finger protein 38 isoform 4 [Pan paniscus]
gi|426361771|ref|XP_004048073.1| PREDICTED: RING finger protein 38 isoform 6 [Gorilla gorilla
gorilla]
Length = 439
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 357 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 389
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 390 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 428
>gi|89272082|emb|CAJ81331.1| ring finger protein 38 [Xenopus (Silurana) tropicalis]
Length = 432
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|291382971|ref|XP_002707959.1| PREDICTED: ring finger protein 38 [Oryctolagus cuniculus]
Length = 560
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 478 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 510
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 511 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 549
>gi|195605866|gb|ACG24763.1| protein binding protein [Zea mays]
Length = 268
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+C ICLS++ + + LPC HH+H+ C+ KWL++N TCP+CKY +
Sbjct: 219 DCPICLSTFRNRETMITLPCMHHYHAACVTKWLRVNKTCPVCKYELF 265
>gi|348569938|ref|XP_003470754.1| PREDICTED: RING finger protein 38-like [Cavia porcellus]
Length = 513
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 431 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 463
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 464 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 502
>gi|223943525|gb|ACN25846.1| unknown [Zea mays]
gi|413953444|gb|AFW86093.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 268
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+C ICLS++ + + LPC HH+H+ C+ KWL++N TCP+CKY +
Sbjct: 219 DCPICLSTFRNRETMITLPCMHHYHAACVTKWLRVNKTCPVCKYELF 265
>gi|417410939|gb|JAA51933.1| Putative ring finger protein 38, partial [Desmodus rotundus]
Length = 467
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 385 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 417
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 418 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 456
>gi|344265309|ref|XP_003404727.1| PREDICTED: RING finger protein 44 [Loxodonta africana]
Length = 432
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|224074629|ref|XP_002304401.1| predicted protein [Populus trichocarpa]
gi|222841833|gb|EEE79380.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
Y +++ + A+C ICL YE+G + LPC+H FH TC+ KWLK ++ CPLC+ +I
Sbjct: 519 YAKSQKHQNEDTAQCYICLVEYEEGDSMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDI 578
Query: 353 LK 354
+
Sbjct: 579 CR 580
>gi|149726055|ref|XP_001502682.1| PREDICTED: RING finger protein 44 [Equus caballus]
Length = 432
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|73953315|ref|XP_546217.2| PREDICTED: RING finger protein 44 isoform 1 [Canis lupus
familiaris]
Length = 431
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 349 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 381
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 382 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 420
>gi|255540693|ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
gi|223550526|gb|EEF52013.1| protein binding protein, putative [Ricinus communis]
Length = 381
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
W I+G W S D L + + W +++L F + + C+ C+ G L ++
Sbjct: 102 WTIIGTLWFTSARDCLPEEGQK--WGFLIWLVFS-YCGLLCIACMCM-GKWLTRRQAHLL 157
Query: 245 AILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYV------ANE 298
+ E D+ +P + FE + + G G+ G Y+ A E
Sbjct: 158 RAQQGIPISEYGVLVDMVRVPDWAFEAAGQEMR---GMGQDAAAYHPGLYLTPTQREAVE 214
Query: 299 RIL----------LPED-AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
++ +P D +EC ICL + G E+ LPC H+FH CI +WL++N CP
Sbjct: 215 ALIQELPKFRLKTVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVECIDEWLRLNVKCPR 274
Query: 348 CKYNIL 353
C+ ++
Sbjct: 275 CRCSVF 280
>gi|116778816|gb|ABK21010.1| unknown [Picea sitchensis]
gi|148908581|gb|ABR17400.1| unknown [Picea sitchensis]
Length = 325
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ G +E +E L + ++C +CL +E G+E +PC H F
Sbjct: 155 AENDANHYGTPPASRSAVEAMPAVEISESHLSSDVSQCAVCLEEFELGSEARQMPCKHMF 214
Query: 331 HSTCIVKWLKMNATCPLCKYNILKGNE 357
HS CI WLK++++CP+C++ + +E
Sbjct: 215 HSDCIQPWLKLHSSCPVCRFQMPVDDE 241
>gi|449280626|gb|EMC87872.1| RING finger protein 38, partial [Columba livia]
Length = 461
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 379 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 411
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 412 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 450
>gi|149739190|ref|XP_001504372.1| PREDICTED: RING finger protein 38 isoform 2 [Equus caballus]
Length = 467
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 385 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 417
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 418 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 456
>gi|126334064|ref|XP_001371090.1| PREDICTED: RING finger protein 38 [Monodelphis domestica]
Length = 520
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 438 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 470
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 471 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 509
>gi|397470558|ref|XP_003806886.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Pan
paniscus]
Length = 432
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|17509463|ref|NP_493231.1| Protein TOE-4 [Caenorhabditis elegans]
gi|3880441|emb|CAB04890.1| Protein TOE-4 [Caenorhabditis elegans]
Length = 489
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
++ C +CLSS+EDG + L CNH FH CI KWL +N CP+C+ I
Sbjct: 429 DEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREEI 477
>gi|300794460|ref|NP_001179642.1| RING finger protein 44 [Bos taurus]
gi|296485561|tpg|DAA27676.1| TPA: ring finger protein 44 [Bos taurus]
Length = 432
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFHPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|119580171|gb|EAW59767.1| hCG40978, isoform CRA_a [Homo sapiens]
Length = 870
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI++G+
Sbjct: 297 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEGD 345
>gi|225435816|ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
vinifera]
gi|225435818|ref|XP_002285766.1| PREDICTED: uncharacterized protein LOC100250148 isoform 2 [Vitis
vinifera]
Length = 368
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ + E+ +C +CL +E G E +PC H FHS CI+ WL+++++CP+C++ I
Sbjct: 232 VKIKENLQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQI 284
>gi|357112906|ref|XP_003558246.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Brachypodium
distachyon]
Length = 284
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 257 SEADLSILP--KYRFEVQNND---EKLGVGAGKMVPI-------ETNGGYVANERILLPE 304
SE +++ LP KY+F+ Q K G G ++P ++ Y A++ PE
Sbjct: 160 SEEEINTLPVFKYKFQAQQGSASARKSGDGPSVLLPSSSGSSNEKSQDAYGASKT---PE 216
Query: 305 DA-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D C +CL G L +LPC H FH CI WL+ TCP+CK+ +
Sbjct: 217 DELTCSVCLEQVVVGDLLRSLPCLHQFHVECIDPWLRQQGTCPVCKHQV 265
>gi|195124305|ref|XP_002006634.1| GI18477 [Drosophila mojavensis]
gi|193911702|gb|EDW10569.1| GI18477 [Drosophila mojavensis]
Length = 490
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G + +E+ + D++CC IC+ SY+
Sbjct: 259 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKMTDEKDM---DSDCCAICIESYKPA 314
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 315 DIIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 350
>gi|120577569|gb|AAI30125.1| LOC100037019 protein [Xenopus laevis]
Length = 496
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 414 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 446
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 447 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 485
>gi|432862383|ref|XP_004069828.1| PREDICTED: uncharacterized protein LOC101160975 [Oryzias latipes]
Length = 445
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 262 SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPE----------------D 305
+ILP + ++Q N+ + ++ E G V + ++ E +
Sbjct: 331 NILPDFSDDIQGNNYE------ALLEFEERQGAVVSRKLSRREIQRFPTKKFHSAKTAGN 384
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
+C IC Y DG +L LPC H +H CI +WLK N TCP+C+ N+ G+
Sbjct: 385 TQCQICFCDYNDGEKLRMLPCFHDYHVQCIDRWLKDNTTCPICRANLADGS 435
>gi|224112257|ref|XP_002316133.1| predicted protein [Populus trichocarpa]
gi|118483434|gb|ABK93617.1| unknown [Populus trichocarpa]
gi|222865173|gb|EEF02304.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 280 VGAGKMVPIETNGGYVANERILLPED---AECCICLSSYEDGTELHALPCNHHFHSTCIV 336
+G K P + A ++ + ED EC ICL +E G + +PC H FH C+
Sbjct: 85 IGNKKGQPPASKASIEAMPKVEIGEDNKDGECAICLEEWELGGVVKEMPCKHRFHGGCVE 144
Query: 337 KWLKMNATCPLCKYNILKGNEQV 359
KWLK++ CP+C+Y + E++
Sbjct: 145 KWLKIHGNCPVCRYKMPVDEEEL 167
>gi|7662486|ref|NP_055716.1| RING finger protein 44 [Homo sapiens]
gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full=RING finger protein 44
gi|24980826|gb|AAH39833.1| Ring finger protein 44 [Homo sapiens]
gi|38969938|gb|AAH63297.1| Ring finger protein 44 [Homo sapiens]
gi|119605477|gb|EAW85071.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|119605478|gb|EAW85072.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|168269688|dbj|BAG09971.1| RING finger protein 44 [synthetic construct]
Length = 432
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>gi|348690933|gb|EGZ30747.1| hypothetical protein PHYSODRAFT_295425 [Phytophthora sojae]
Length = 548
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D C ICL +EDG ++ LPC H FH CI +WLK N +CP+CK N+
Sbjct: 476 DDVCPICLIEFEDGEDVRNLPCKHIFHVACIDEWLKRNTSCPMCKSNV 523
>gi|297799364|ref|XP_002867566.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313402|gb|EFH43825.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 357
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
+ + E +C ICL ++ G+E +PC H FH CIV WL+++++CP+C+Y + +E
Sbjct: 234 VKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDE 291
>gi|40789045|dbj|BAA83052.2| KIAA1100 protein [Homo sapiens]
Length = 444
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 362 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 394
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 395 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 433
>gi|327277233|ref|XP_003223370.1| PREDICTED: RING finger protein 38-like [Anolis carolinensis]
Length = 486
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 404 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 436
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 437 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 475
>gi|356560617|ref|XP_003548587.1| PREDICTED: uncharacterized protein LOC100812272 [Glycine max]
Length = 578
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
A+C ICL YEDG + LPC+H FH TCI KWLK ++ CPLC+ +I
Sbjct: 518 AQCYICLVEYEDGDNMRVLPCHHEFHRTCIDKWLKEIHRVCPLCRRDI 565
>gi|334327495|ref|XP_001380092.2| PREDICTED: zinc/RING finger protein 3-like [Monodelphis domestica]
Length = 874
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 300 CAICLEKYIDGEELRVIPCTHRFHKKCVDPWLLQHHTCPHCRHNIIEQKGN 350
>gi|426351155|ref|XP_004043123.1| PREDICTED: RING finger protein 44 [Gorilla gorilla gorilla]
Length = 413
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 331 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 363
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 364 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 402
>gi|410949126|ref|XP_003981275.1| PREDICTED: RING finger protein 44 isoform 1 [Felis catus]
Length = 431
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 349 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 381
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 382 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 420
>gi|410040033|ref|XP_001136491.3| PREDICTED: RING finger protein 44 isoform 2 [Pan troglodytes]
Length = 430
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 348 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 380
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 381 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 419
>gi|356495268|ref|XP_003516501.1| PREDICTED: uncharacterized protein LOC100815830 [Glycine max]
Length = 567
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
E +C ICL YEDG + LPC+H FH+TC+ KWLK ++ CPLC+ +I
Sbjct: 508 EPVQCYICLVEYEDGDSMRVLPCHHEFHTTCVDKWLKEIHRVCPLCRGDI 557
>gi|297849826|ref|XP_002892794.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338636|gb|EFH69053.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 299 RILLPEDAE-----CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
R+++ ED E C ICL + G +PC H FHS C+ +WL M+ATCP+C+Y +
Sbjct: 89 RVVIGEDKEKDGGSCAICLEEWSKGDVATEMPCKHKFHSKCVEEWLGMHATCPMCRYEM 147
>gi|395841991|ref|XP_003793805.1| PREDICTED: uncharacterized protein LOC100942711 [Otolemur
garnettii]
Length = 620
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ ++L N
Sbjct: 568 CSVCITEYTEGNKLRVLPCSHEYHVHCIDRWLSDNSTCPICRNDVLGSN 616
>gi|297746512|emb|CBI16568.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ + G + IE A + + E+ +C +CL +E G E +PC H F
Sbjct: 163 AENDPNRYGTPPAQKDAIE------AMPTVKIKENLQCSVCLDDFEIGAEAREMPCKHKF 216
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
HS CI+ WL+++++CP+C++ I
Sbjct: 217 HSGCILPWLELHSSCPVCRFQI 238
>gi|327286506|ref|XP_003227971.1| PREDICTED: RING finger protein 44-like [Anolis carolinensis]
Length = 445
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +++ E C +
Sbjct: 363 AKPRGLTKADIEHLPSYRFNPESHQS---------------------------EQTLCVV 395
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ CI KWLK N TCP+C+
Sbjct: 396 CFSDFEVRQLLRVLPCNHEFHAKCIDKWLKANRTCPICR 434
>gi|224104393|ref|XP_002313422.1| predicted protein [Populus trichocarpa]
gi|222849830|gb|EEE87377.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 251 AGQEGASEADLSILPKYRFEV---QNNDEKLGVGAGKMVPIET-NGGYVANERILLPEDA 306
A +E +++ LP ++++V +N L + P ET A+ + ED
Sbjct: 151 ASTTSMTEEEINALPVHKYKVPVQENGSASLQHASSSSAPAETKQDSKNADGNMKTSEDE 210
Query: 307 -ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C ICL G + +LPC H FH+ CI WL+ TCP+CK+ I G
Sbjct: 211 LTCTICLEQVNRGELVRSLPCLHQFHTNCIDPWLRQQGTCPVCKFLIGSG 260
>gi|195430052|ref|XP_002063071.1| GK21726 [Drosophila willistoni]
gi|194159156|gb|EDW74057.1| GK21726 [Drosophila willistoni]
Length = 779
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G +++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKMSDEKDL---DSDCCAICIEAYKPS 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DIIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|444706661|gb|ELW47987.1| RING finger protein 44 [Tupaia chinensis]
Length = 278
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 27/101 (26%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 196 AKPRGLTKADIEQLPSYRFHPDSHQS---------------------------EQTLCVV 228
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
C S +E L LPCNH FH+ C+ KWLK N TCP+C+ +
Sbjct: 229 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 269
>gi|330804127|ref|XP_003290050.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
gi|325079850|gb|EGC33431.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
Length = 102
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CCICL E+G E+ LPC H FH TCI +WLK+N CP+ K I
Sbjct: 57 CCICLCEMENGEEVRTLPCKHFFHVTCIDQWLKVNKVCPVDKKAI 101
>gi|449512895|ref|XP_004164172.1| PREDICTED: uncharacterized LOC101213468, partial [Cucumis sativus]
Length = 532
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
E A+C ICL YE+G + LPC+H FH+TC+ KWLK ++ CPLC+ +I
Sbjct: 471 EAAQCYICLVEYEEGDSMRVLPCHHEFHTTCVDKWLKEIHRVCPLCRGDI 520
>gi|326504488|dbj|BAJ91076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
A C +CL Y G LPC H FHS CIV WL+M+++CP+C++ +
Sbjct: 222 ASCAVCLEDYASGERARELPCRHRFHSQCIVPWLEMHSSCPVCRFQL 268
>gi|432848440|ref|XP_004066346.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 712
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N +E+ L C +
Sbjct: 630 AKPRGLTKADIEQLPSYRFNPNNRQ---------------------SEQTL------CVV 662
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 663 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 701
>gi|348575005|ref|XP_003473280.1| PREDICTED: RING finger protein 44-like [Cavia porcellus]
Length = 432
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNADSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|26325250|dbj|BAC26379.1| unnamed protein product [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRE 597
>gi|340522021|gb|EGR52254.1| predicted protein [Trichoderma reesei QM6a]
Length = 514
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNI 352
PE+A C IC + +G ++ LPCNH FH TCI WL ++ TCPLC+ ++
Sbjct: 342 PENAGCSICTEDFREGEDMRVLPCNHKFHPTCIDPWLVNVSGTCPLCRLDL 392
>gi|281364274|ref|NP_001163300.1| goliath, isoform D [Drosophila melanogaster]
gi|272432707|gb|ACZ94572.1| goliath, isoform D [Drosophila melanogaster]
Length = 601
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEKL----GVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G ++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|47078289|ref|NP_035406.3| E3 ubiquitin-protein ligase RLIM [Mus musculus]
gi|259016319|sp|Q9WTV7.2|RLIM_MOUSE RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12
gi|15277964|gb|AAH12960.1| Ring finger protein, LIM domain interacting [Mus musculus]
gi|148682142|gb|EDL14089.1| ring finger protein 12, isoform CRA_a [Mus musculus]
gi|148682143|gb|EDL14090.1| ring finger protein 12, isoform CRA_a [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRE 597
>gi|335283091|ref|XP_003354234.1| PREDICTED: RING finger protein 44 isoform 2 [Sus scrofa]
Length = 351
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFHPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|301611422|ref|XP_002935238.1| PREDICTED: hypothetical protein LOC100491274 [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C ICL + DG EL LPC H +H C+ WL+ N TCPLC Y+IL+
Sbjct: 268 CAICLEEFTDGQELRILPCCHEYHLGCVDPWLRQNHTCPLCMYDILE 314
>gi|125525385|gb|EAY73499.1| hypothetical protein OsI_01381 [Oryza sativa Indica Group]
Length = 329
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D+ C +CL Y G +PC H FH+ CIV WLKM+++CP+C++ +
Sbjct: 210 DSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQL 257
>gi|402873507|ref|XP_003900615.1| PREDICTED: RING finger protein 44 isoform 2 [Papio anubis]
Length = 351
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|119605476|gb|EAW85070.1| ring finger protein 44, isoform CRA_a [Homo sapiens]
Length = 408
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 326 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 358
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 359 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 397
>gi|357137455|ref|XP_003570316.1| PREDICTED: uncharacterized protein LOC100833892 isoform 1
[Brachypodium distachyon]
Length = 518
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
+C ICL+ YEDG ++ +LPC H FH C+ KWLK ++ CPLC+ ++ +G
Sbjct: 466 QCHICLTEYEDGDQIRSLPCKHEFHLQCVDKWLKEIHRVCPLCRGDVCEG 515
>gi|356567978|ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 344
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 39/53 (73%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+++ E+++C +CL +E G+E +PC H FHS CI+ WL+++++CP+C+ +
Sbjct: 229 VIINENSQCSVCLDDFEVGSEAKEMPCKHRFHSGCILPWLELHSSCPVCRLQL 281
>gi|224088216|ref|XP_002308375.1| predicted protein [Populus trichocarpa]
gi|222854351|gb|EEE91898.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
ED +C ICL+ YE+G ++ LPC+H +H C+ KWLK ++ CPLC+ ++ +G
Sbjct: 469 EDEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDVREG 521
>gi|12850423|dbj|BAB28712.1| unnamed protein product [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRE 597
>gi|449465663|ref|XP_004150547.1| PREDICTED: uncharacterized protein LOC101213468 [Cucumis sativus]
Length = 587
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
E A+C ICL YE+G + LPC+H FH+TC+ KWLK ++ CPLC+ +I
Sbjct: 526 EAAQCYICLVEYEEGDSMRVLPCHHEFHTTCVDKWLKEIHRVCPLCRGDI 575
>gi|339233480|ref|XP_003381857.1| zinc/RING finger protein 3 [Trichinella spiralis]
gi|316979281|gb|EFV62089.1| zinc/RING finger protein 3 [Trichinella spiralis]
Length = 733
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 292 GGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
G + ++ L C ICL SY+DG L + C H FH C+ WL +N TCPLC YN
Sbjct: 245 AGLLNGSKLSLNSMDGCAICLESYKDGQILRVISCGHEFHKKCVDPWLLLNRTCPLCMYN 304
Query: 352 IL 353
++
Sbjct: 305 VI 306
>gi|148670480|gb|EDL02427.1| ring finger protein 38, isoform CRA_a [Mus musculus]
Length = 465
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 383 AKPRGLTKADIEQLPSYRFNPSNHQS---------------------------EQTLCVV 415
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 416 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 454
>gi|147832281|emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
Length = 641
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 224 FCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAG 283
F V+L+ ++ + CC ++ ++ A+ +D +LP+ F ++ DE V G
Sbjct: 43 FLVLLSTVLLASYLCCRRRPLSPHHSRNPASAANSSDGIVLPRIIFVAEDEDEDQNVVVG 102
Query: 284 KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMN 342
+ + + D+ C ICL Y+D L LP C H FH C+ WLK+N
Sbjct: 103 LDQAVIDSYPKFPFSKSNTHLDSVCSICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLN 162
Query: 343 ATCPLCKYNIL 353
A+CP+C+ + L
Sbjct: 163 ASCPVCRNSPL 173
>gi|297793133|ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310286|gb|EFH40710.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
E +C +CL +E GTE LPC H FH CIV WL+++++CP+C++ +
Sbjct: 253 EPLQCSVCLDDFEKGTEAKELPCKHKFHIRCIVPWLELHSSCPVCRFEL 301
>gi|224088434|ref|XP_002186805.1| PREDICTED: RING finger protein 38-like [Taeniopygia guttata]
Length = 475
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 27/95 (28%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G ++AD+ LP YRF N+ E C +C+
Sbjct: 397 GLTKADIEQLPSYRFNPNNHQS---------------------------EQKLCVVCMCD 429
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 430 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 464
>gi|56749656|sp|Q8BI21.1|RNF38_MOUSE RecName: Full=RING finger protein 38
gi|26325586|dbj|BAC26547.1| unnamed protein product [Mus musculus]
Length = 518
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 436 AKPRGLTKADIEQLPSYRFNPSNHQS---------------------------EQTLCVV 468
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 469 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 507
>gi|344295009|ref|XP_003419207.1| PREDICTED: zinc/RING finger protein 3 [Loxodonta africana]
Length = 912
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
++C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 191 SDCAICLEKYIDGEELRVIPCTHRFHKKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|334311222|ref|XP_001380922.2| PREDICTED: RING finger protein 44-like [Monodelphis domestica]
Length = 395
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +++ E C +
Sbjct: 313 AKPRGLTKADIEQLPSYRFNPESHQS---------------------------EQTLCVV 345
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 346 CFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 384
>gi|357492753|ref|XP_003616665.1| RING finger protein [Medicago truncatula]
gi|355518000|gb|AES99623.1| RING finger protein [Medicago truncatula]
Length = 170
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 273 NNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFH 331
+ E L A K +PI + +N + E+ ECCICLS++ DG ++ LP C+H+FH
Sbjct: 71 SQSEGLNADAIKKLPIILHQSNTSNHAL---EETECCICLSTFRDGEKVKVLPSCDHYFH 127
Query: 332 STCIVKWLKMNATCPLCKYNI 352
C+ WL +++CPLC+ ++
Sbjct: 128 CECVDAWLVNHSSCPLCRASL 148
>gi|301628324|ref|XP_002943307.1| PREDICTED: RING finger protein 44-like [Xenopus (Silurana)
tropicalis]
Length = 430
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++A++ LP YRF +++ E C +
Sbjct: 348 AKPRGLTKANIEQLPSYRFNAESHQS---------------------------EQTLCVV 380
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 381 CFSDFESRQLLRVLPCNHEFHAKCVDKWLKSNRTCPICR 419
>gi|296085485|emb|CBI29217.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
Y +++ E A+C ICL YE+G + LPC+H FH TC+ KWLK ++ CPLC+ +I
Sbjct: 429 YDKSQKHQNDEAAQCYICLVEYEEGDNMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDI 488
Query: 353 LKG 355
+
Sbjct: 489 CRS 491
>gi|388509536|gb|AFK42834.1| unknown [Lotus japonicus]
Length = 107
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 294 YVANERILLPE-DAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYN 351
Y A ++ LP D EC ICLS + DG ++ LP CNH FH CI KWL +++CP C+
Sbjct: 3 YTAELKLKLPGLDTECVICLSEFTDGEKVRVLPKCNHGFHVRCIDKWLSSHSSCPKCRQC 62
Query: 352 ILKGNEQV 359
+L+ + V
Sbjct: 63 LLETQKVV 70
>gi|357137457|ref|XP_003570317.1| PREDICTED: uncharacterized protein LOC100833892 isoform 2
[Brachypodium distachyon]
Length = 517
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
+C ICL+ YEDG ++ +LPC H FH C+ KWLK ++ CPLC+ ++ +G
Sbjct: 465 QCHICLTEYEDGDQIRSLPCKHEFHLQCVDKWLKEIHRVCPLCRGDVCEG 514
>gi|354502030|ref|XP_003513090.1| PREDICTED: RING finger protein 38 [Cricetulus griseus]
Length = 465
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 383 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 415
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 416 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 454
>gi|426229341|ref|XP_004008749.1| PREDICTED: RING finger protein 44 [Ovis aries]
Length = 432
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 27/97 (27%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G ++AD+ LP YRF ++ E C +C S
Sbjct: 354 GLTKADIEQLPSYRFHPDSHQS---------------------------EQTLCVVCFSD 386
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
+E L LPCNH FH+ C+ KWLK N TCP+C+ +
Sbjct: 387 FEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 423
>gi|84781711|ref|NP_780410.2| RING finger protein 38 isoform 1 [Mus musculus]
gi|38173739|gb|AAH60730.1| Ring finger protein 38 [Mus musculus]
gi|38566244|gb|AAH62976.1| Ring finger protein 38 [Mus musculus]
Length = 464
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 382 AKPRGLTKADIEQLPSYRFNPSNHQS---------------------------EQTLCVV 414
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 415 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 453
>gi|225427655|ref|XP_002270708.1| PREDICTED: uncharacterized protein LOC100249371 [Vitis vinifera]
Length = 566
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
Y +++ E A+C ICL YE+G + LPC+H FH TC+ KWLK ++ CPLC+ +I
Sbjct: 497 YDKSQKHQNDEAAQCYICLVEYEEGDNMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDI 556
Query: 353 LK 354
+
Sbjct: 557 CR 558
>gi|292609636|ref|XP_695200.4| PREDICTED: RING finger protein 38 [Danio rerio]
Length = 673
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 591 AKPRGLTKADIEQLPSYRFNPSNHQS---------------------------EQTLCVV 623
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 624 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 662
>gi|52545897|emb|CAD39147.2| hypothetical protein [Homo sapiens]
Length = 354
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 272 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 304
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 305 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 343
>gi|146162094|ref|XP_001471132.1| hypothetical protein TTHERM_00170289 [Tetrahymena thermophila]
gi|146146518|gb|EDK31997.1| hypothetical protein TTHERM_00170289 [Tetrahymena thermophila
SB210]
Length = 117
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 307 ECCICLSSYEDGTELHALPCN--HHFHSTCIVKWLKMNATCPLCKYNI 352
+C ICLS YE G + LPCN H+FH CI +WLK+N +CP+C+ N+
Sbjct: 46 DCSICLSMYEVGDNVVFLPCNKNHNFHDECIQRWLKVNNSCPVCRQNV 93
>gi|84781709|ref|NP_001034082.1| RING finger protein 38 isoform 2 [Mus musculus]
gi|74188535|dbj|BAE28022.1| unnamed protein product [Mus musculus]
gi|148670482|gb|EDL02429.1| ring finger protein 38, isoform CRA_c [Mus musculus]
Length = 432
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPSNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 421
>gi|115435944|ref|NP_001042730.1| Os01g0276600 [Oryza sativa Japonica Group]
gi|6539567|dbj|BAA88184.1| zinc finger protein -like [Oryza sativa Japonica Group]
gi|113532261|dbj|BAF04644.1| Os01g0276600 [Oryza sativa Japonica Group]
Length = 329
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D+ C +CL Y G +PC H FH+ CIV WLKM+++CP+C++ +
Sbjct: 210 DSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQL 257
>gi|431901142|gb|ELK08267.1| E3 ubiquitin-protein ligase RLIM [Pteropus alecto]
Length = 607
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 553 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 604
>gi|357137459|ref|XP_003570318.1| PREDICTED: uncharacterized protein LOC100833892 isoform 3
[Brachypodium distachyon]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
+C ICL+ YEDG ++ +LPC H FH C+ KWLK ++ CPLC+ ++ +G
Sbjct: 458 QCHICLTEYEDGDQIRSLPCKHEFHLQCVDKWLKEIHRVCPLCRGDVCEG 507
>gi|148236424|ref|NP_001084194.1| XRnf12C protein [Xenopus laevis]
gi|33411674|dbj|BAC81443.1| XRnf12C [Xenopus laevis]
Length = 825
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 771 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 816
>gi|124286866|ref|NP_001074393.1| E3 ubiquitin-protein ligase ZNRF3 precursor [Mus musculus]
gi|81910114|sp|Q5SSZ7.1|ZNRF3_MOUSE RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
Length = 913
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 210 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 251
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 252 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 306
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 307 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 340
>gi|53733396|gb|AAH83548.1| Rnf38 protein [Rattus norvegicus]
gi|149045789|gb|EDL98789.1| ring finger protein 38, isoform CRA_a [Rattus norvegicus]
gi|149045790|gb|EDL98790.1| ring finger protein 38, isoform CRA_a [Rattus norvegicus]
Length = 432
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPSNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 421
>gi|147901542|ref|NP_001090068.1| E3 ubiquitin-protein ligase ZNRF3 [Xenopus laevis]
gi|123904520|sp|Q4KLR8.1|ZNRF3_XENLA RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
gi|68534586|gb|AAH99029.1| MGC115570 protein [Xenopus laevis]
Length = 784
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
++C ICL Y DG EL +PC H FH C+ WL N TCP C++NI++
Sbjct: 200 SDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIE 248
>gi|326924458|ref|XP_003208444.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Meleagris
gallopavo]
Length = 593
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 539 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 590
>gi|392333113|ref|XP_003752796.1| PREDICTED: zinc/RING finger protein 3-like [Rattus norvegicus]
Length = 816
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 154
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 155 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 209
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 210 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|168693457|ref|NP_001108244.1| E3 ubiquitin-protein ligase RNF12-B [Xenopus laevis]
gi|82208071|sp|Q7T037.1|RF12B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-B; AltName:
Full=RING finger protein 12-B; AltName: Full=XRnf12B
gi|33411672|dbj|BAC81442.1| XRnf12B [Xenopus laevis]
Length = 757
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748
>gi|410949128|ref|XP_003981276.1| PREDICTED: RING finger protein 44 isoform 2 [Felis catus]
Length = 351
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|255640658|gb|ACU20614.1| unknown [Glycine max]
Length = 188
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 39/53 (73%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+++ E+++C +CL +E G+E +PC H FHS CI+ WL+++++CP+C+ +
Sbjct: 73 VIINENSQCSVCLDDFEVGSEAKEMPCKHRFHSGCILPWLELHSSCPVCRLQL 125
>gi|126307440|ref|XP_001362952.1| PREDICTED: RING finger protein 43 [Monodelphis domestica]
Length = 778
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + DG EL + C H FH TC+ WL + TCPLC +NI++G
Sbjct: 271 CAICLEEFTDGQELRVISCRHEFHRTCVDPWLYQHQTCPLCMFNIIEGT 319
>gi|213626227|gb|AAI69999.1| XRnf12C protein [Xenopus laevis]
Length = 751
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 697 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 742
>gi|345807549|ref|XP_859444.2| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 3 [Canis lupus
familiaris]
Length = 625
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 622
>gi|395505165|ref|XP_003756915.1| PREDICTED: RING finger protein 44 isoform 2 [Sarcophilus harrisii]
Length = 350
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF +++ E C +
Sbjct: 268 AKPRGLTKADIEQLPSYRFNPESHQS---------------------------EQTLCVV 300
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 301 CFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
>gi|380807725|gb|AFE75738.1| zinc/RING finger protein 3 isoform 1 precursor, partial [Macaca
mulatta]
Length = 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 79 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 120
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 121 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSSSTSDCAICLEKYIDGEELRVI 175
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 176 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 209
>gi|354488554|ref|XP_003506433.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
gi|344243810|gb|EGV99913.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 603
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 549 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRE 600
>gi|224098363|ref|XP_002199379.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Taeniopygia
guttata]
Length = 595
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 592
>gi|148909153|gb|ABR17677.1| unknown [Picea sitchensis]
Length = 451
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ + G I T + +L+ + +C +C +E GTE+ +PC H +
Sbjct: 195 AENDPNRYGTPPASKASIGTMPTIKITQDLLVTDSTQCAVCKDEFEVGTEVRQMPCKHMY 254
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
HS CI+ WL+ + +CP+C+Y +
Sbjct: 255 HSVCILPWLEQHNSCPVCRYEM 276
>gi|410988853|ref|XP_004000691.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Felis catus]
Length = 621
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 567 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 618
>gi|357125304|ref|XP_003564334.1| PREDICTED: uncharacterized protein LOC100841715 [Brachypodium
distachyon]
Length = 248
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
+C ICLS++ + L LPC H++H+ C+ KWLK++ TCP+CKY +
Sbjct: 199 DCSICLSAFRNRERLITLPCKHNYHAGCVTKWLKIDKTCPVCKYEVF 245
>gi|62859463|ref|NP_001016091.1| E3 ubiquitin-protein ligase RNF12 [Xenopus (Silurana) tropicalis]
gi|123884087|sp|Q07G42.1|RNF12_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF12; AltName: Full=RING
finger protein 12
gi|115530795|emb|CAL49424.1| ring finger protein 12 [Xenopus (Silurana) tropicalis]
Length = 639
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
>gi|403290096|ref|XP_003936168.1| PREDICTED: RING finger protein 44 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 429
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 347 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 379
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 380 CFSDFEVRQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 418
>gi|388501556|gb|AFK38844.1| unknown [Lotus japonicus]
Length = 232
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+D EC +CL +E G + +PC H FH CI KWL ++ +CP+C+Y +
Sbjct: 115 DDGECVVCLEGFEVGKVVKEMPCKHRFHPDCIEKWLGIHGSCPVCRYEM 163
>gi|355716637|gb|AES05675.1| ring finger protein, LIM domain interacting [Mustela putorius furo]
Length = 625
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 622
>gi|301787517|ref|XP_002929173.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
gi|281350879|gb|EFB26463.1| hypothetical protein PANDA_019274 [Ailuropoda melanoleuca]
Length = 625
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 622
>gi|224001986|ref|XP_002290665.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974087|gb|EED92417.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 402
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 302 LPEDA-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
LP D ECCICL ++ G E LPC H FH C+ +WL N TCP+CK
Sbjct: 345 LPADKRECCICLEEFKTGDERTTLPCLHGFHRLCVTRWLGSNGTCPVCK 393
>gi|449268981|gb|EMC79795.1| E3 ubiquitin-protein ligase rnf12-A [Columba livia]
Length = 595
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 592
>gi|187956481|gb|AAI51081.1| Znrf3 protein [Mus musculus]
gi|223462533|gb|AAI51084.1| Zinc and ring finger 3 [Mus musculus]
Length = 808
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 154
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 155 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 209
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 210 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|213624561|gb|AAI71271.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
gi|213627806|gb|AAI71269.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
>gi|218191753|gb|EEC74180.1| hypothetical protein OsI_09301 [Oryza sativa Indica Group]
Length = 520
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
+C ICL+ YEDG ++ +LPC H FH C+ KWLK ++ CPLC+ ++ +G
Sbjct: 469 QCHICLTEYEDGDQIRSLPCKHEFHLLCVDKWLKEVHRVCPLCRGDVCEG 518
>gi|194379472|dbj|BAG63702.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|114689178|ref|XP_001141975.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
troglodytes]
gi|114689180|ref|XP_001142065.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
troglodytes]
gi|410212840|gb|JAA03639.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410212842|gb|JAA03640.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259648|gb|JAA17790.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259650|gb|JAA17791.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294556|gb|JAA25878.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294558|gb|JAA25879.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337801|gb|JAA37847.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337803|gb|JAA37848.1| ring finger protein, LIM domain interacting [Pan troglodytes]
Length = 620
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 566 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 617
>gi|149757525|ref|XP_001505027.1| PREDICTED: e3 ubiquitin-protein ligase RLIM isoform 1 [Equus
caballus]
Length = 616
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 562 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 613
>gi|417403353|gb|JAA48484.1| Putative e3 ubiquitin-protein ligase rlim [Desmodus rotundus]
Length = 617
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 563 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 614
>gi|403291724|ref|XP_003936919.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Saimiri boliviensis
boliviensis]
Length = 642
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 588 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 639
>gi|149047611|gb|EDM00281.1| rCG35969 [Rattus norvegicus]
Length = 814
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 154
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 155 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 209
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 210 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|395859921|ref|XP_003802274.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Otolemur garnettii]
Length = 619
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 565 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 616
>gi|311276513|ref|XP_003135236.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Sus scrofa]
gi|335306207|ref|XP_003360418.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Sus scrofa]
gi|350595776|ref|XP_003484178.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 623
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 569 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 620
>gi|67846064|ref|NP_001020063.1| E3 ubiquitin-protein ligase RLIM [Rattus norvegicus]
gi|392355774|ref|XP_003752129.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Rattus
norvegicus]
gi|66910661|gb|AAH97491.1| Ring finger protein 12 [Rattus norvegicus]
gi|149055585|gb|EDM07169.1| ring finger protein 12, isoform CRA_b [Rattus norvegicus]
Length = 603
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 549 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRE 600
>gi|74223529|dbj|BAE21609.1| unnamed protein product [Mus musculus]
Length = 809
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 114 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 155
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 156 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 210
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 211 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 244
>gi|34452684|ref|NP_057204.2| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|34452686|ref|NP_899196.1| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|426396456|ref|XP_004064457.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Gorilla
gorilla gorilla]
gi|426396458|ref|XP_004064458.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Gorilla
gorilla gorilla]
gi|143811451|sp|Q9NVW2.3|RLIM_HUMAN RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12;
AltName: Full=Renal carcinoma antigen NY-REN-43
gi|15426504|gb|AAH13357.1| Ring finger protein, LIM domain interacting [Homo sapiens]
gi|119619045|gb|EAW98639.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|119619046|gb|EAW98640.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|123993649|gb|ABM84426.1| ring finger protein 12 [synthetic construct]
gi|123999977|gb|ABM87497.1| ring finger protein 12 [synthetic construct]
gi|306921343|dbj|BAJ17751.1| ring finger protein, LIM domain interacting [synthetic construct]
Length = 624
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 621
>gi|432120081|gb|ELK38694.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 612
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 558 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 609
>gi|397507950|ref|XP_003824440.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
paniscus]
gi|397507952|ref|XP_003824441.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
paniscus]
Length = 622
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 619
>gi|149411042|ref|XP_001505684.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like
[Ornithorhynchus anatinus]
Length = 595
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 592
>gi|298714587|emb|CBJ27578.1| similar to ring finger protein 167 isoform 1 [Ectocarpus
siliculosus]
Length = 431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 262 SILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLP--------EDAECCICLS 313
++LPK+R KL G G M +E G + P E+A C ICL
Sbjct: 105 NVLPKHR----RFGSKLAGGGGDMD-VEKGWGVGGPGKGTEPAAAGEGVEEEATCAICLC 159
Query: 314 SYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
EDG +L LPC H FH+ C+ WL + TCP CK +
Sbjct: 160 EEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPV 198
>gi|354486388|ref|XP_003505363.1| PREDICTED: zinc/RING finger protein 3 [Cricetulus griseus]
Length = 818
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 154
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 155 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 209
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 210 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|344282004|ref|XP_003412765.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Loxodonta
africana]
Length = 609
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 555 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 606
>gi|388453379|ref|NP_001253768.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|402910577|ref|XP_003917944.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Papio anubis]
gi|383412441|gb|AFH29434.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412443|gb|AFH29435.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412445|gb|AFH29436.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412447|gb|AFH29437.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412449|gb|AFH29438.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412451|gb|AFH29439.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
Length = 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 621
>gi|225464303|ref|XP_002266511.1| PREDICTED: RING-H2 finger protein ATL51 [Vitis vinifera]
gi|297744791|emb|CBI38059.3| unnamed protein product [Vitis vinifera]
Length = 338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
E +C +CLS +EDG L LP CNH FH CI WLK +++CPLC+++I
Sbjct: 131 EGTDCSVCLSEFEDGENLRLLPKCNHAFHLPCIDTWLKSHSSCPLCRFDI 180
>gi|149568981|ref|XP_001517302.1| PREDICTED: RING finger protein 38, partial [Ornithorhynchus
anatinus]
Length = 460
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 27/106 (25%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 378 AKPRGLTKADIEQLPSYRFNSNNHQS---------------------------EQTLCVV 410
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C+ +E L LPC+H FH+ C+ KWLK N TCP+C+ + +G+
Sbjct: 411 CMCDFESRQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEGH 456
>gi|297710376|ref|XP_002831863.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pongo
abelii]
Length = 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 621
>gi|426247840|ref|XP_004017684.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Ovis aries]
Length = 617
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 316
>gi|67968828|dbj|BAE00771.1| unnamed protein product [Macaca fascicularis]
Length = 483
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 429 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 480
>gi|7022528|dbj|BAA91632.1| unnamed protein product [Homo sapiens]
Length = 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 621
>gi|157535|gb|AAA28582.1| goliath protein [Drosophila melanogaster]
Length = 284
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 266 KYRFEVQNNDEK----LGVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDGTE 320
++R+ +Q D++ V ++ I T G ++E+ L D++CC IC+ +Y+
Sbjct: 83 RFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDL---DSDCCAICIEAYKPTDT 138
Query: 321 LHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 139 IRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 172
>gi|291411188|ref|XP_002721870.1| PREDICTED: ring finger protein, LIM domain interacting [Oryctolagus
cuniculus]
Length = 612
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 558 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 609
>gi|148708581|gb|EDL40528.1| mCG14691, isoform CRA_b [Mus musculus]
Length = 814
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 154
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 155 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 209
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 210 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|444518192|gb|ELV12009.1| E3 ubiquitin-protein ligase RLIM [Tupaia chinensis]
Length = 558
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 504 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 555
>gi|431892704|gb|ELK03137.1| RING finger protein 44 [Pteropus alecto]
Length = 351
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPAYRFNPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 340
>gi|15239131|ref|NP_199108.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|18087616|gb|AAL58938.1|AF462851_1 AT5g42940/MBD2_14 [Arabidopsis thaliana]
gi|9758583|dbj|BAB09196.1| unnamed protein product [Arabidopsis thaliana]
gi|28416527|gb|AAO42794.1| At5g42940/MBD2_14 [Arabidopsis thaliana]
gi|227206274|dbj|BAH57192.1| AT5G42940 [Arabidopsis thaliana]
gi|332007507|gb|AED94890.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 691
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 303 PEDAE-CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
P+DAE CC+C Y +G ++ L C H FHS CI +WLK CP+CK L
Sbjct: 631 PQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKTTGLN 683
>gi|296235819|ref|XP_002763060.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Callithrix
jacchus]
Length = 620
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 566 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 617
>gi|10944884|emb|CAC14228.1| RING zinc finger LIM domain binding protein [Homo sapiens]
Length = 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 621
>gi|426257257|ref|XP_004022246.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Ovis aries]
Length = 610
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 556 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 607
>gi|229596686|ref|XP_001007660.3| hypothetical protein TTHERM_00059280 [Tetrahymena thermophila]
gi|225565166|gb|EAR87415.3| hypothetical protein TTHERM_00059280 [Tetrahymena thermophila
SB210]
Length = 285
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
EC +C + +G +L +PCNH +HS+C+V WLKM+ +CP C+Y + N+
Sbjct: 217 ECSVCKEEFTEGEQLVKMPCNHMYHSSCLVTWLKMHNSCPTCRYELPTDNQ 267
>gi|5360113|gb|AAD42875.1|AF155109_1 putative ring zinc finger protein NY-REN-43 antigen [Homo sapiens]
gi|189054525|dbj|BAG37298.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 429 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 480
>gi|15241188|ref|NP_200445.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|10177832|dbj|BAB11261.1| unnamed protein product [Arabidopsis thaliana]
gi|17380898|gb|AAL36261.1| unknown protein [Arabidopsis thaliana]
gi|20259581|gb|AAM14133.1| unknown protein [Arabidopsis thaliana]
gi|332009368|gb|AED96751.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 396
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
E +C +CL +E GTE +PC H FH CIV WL+++++CP+C++ +
Sbjct: 255 EPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 303
>gi|301772736|ref|XP_002921790.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44-like
[Ailuropoda melanoleuca]
Length = 498
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 416 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 448
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 449 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 487
>gi|328868880|gb|EGG17258.1| phosphatidylinositol transfer protein [Dictyostelium fasciculatum]
Length = 587
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+ C ICL +E L LPC HHFHS CI KWLK+ A CP+CK
Sbjct: 538 QPTSCSICLDEFEIDNHLKTLPCLHHFHSECIDKWLKIKANCPICK 583
>gi|115449247|ref|NP_001048403.1| Os02g0798600 [Oryza sativa Japonica Group]
gi|51091322|dbj|BAD36057.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113537934|dbj|BAF10317.1| Os02g0798600 [Oryza sativa Japonica Group]
gi|222623853|gb|EEE57985.1| hypothetical protein OsJ_08736 [Oryza sativa Japonica Group]
Length = 389
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
+C ICL+ YEDG ++ +LPC H FH C+ KWLK ++ CPLC+ ++ +G
Sbjct: 338 QCHICLTEYEDGDQIRSLPCKHEFHLLCVDKWLKEVHRVCPLCRGDVCEG 387
>gi|24762824|ref|NP_726508.1| goliath, isoform B [Drosophila melanogaster]
gi|56405373|sp|Q06003.3|GOLI_DROME RecName: Full=Protein goliath; AltName: Full=Protein g1; Flags:
Precursor
gi|17861674|gb|AAL39314.1| GH20973p [Drosophila melanogaster]
gi|21626778|gb|AAM68328.1| goliath, isoform B [Drosophila melanogaster]
gi|220942304|gb|ACL83695.1| gol-PB [synthetic construct]
gi|220952522|gb|ACL88804.1| gol-PB [synthetic construct]
Length = 461
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEK----LGVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G ++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|169806174|ref|XP_001827832.1| zinc finger, C3HC4 type [Enterocytozoon bieneusi H348]
gi|161779280|gb|EDQ31303.1| zinc finger, C3HC4 type [Enterocytozoon bieneusi H348]
Length = 247
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
E+ C IC Y+ GT + LPCNHHFHS CI +W + +CPLCK +I
Sbjct: 185 ENDRCTICYDDYKVGTGIKILPCNHHFHSECIDEWFNVKDSCPLCKKSI 233
>gi|440910350|gb|ELR60156.1| E3 ubiquitin-protein ligase RLIM [Bos grunniens mutus]
Length = 611
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 557 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 608
>gi|330792054|ref|XP_003284105.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
gi|325085919|gb|EGC39317.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
Length = 204
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 250 VAGQEGASEADLSILPKYRFEVQNN-DEKLGVGAGKMVPIETNGGYVANERILLPEDAEC 308
+ GA + + +LP + E Q + D L G+ K + + C
Sbjct: 114 ITPHGGAKKEQIDLLPIHHIENQQDLDTFLNSGSSKDL-----------------QQKVC 156
Query: 309 CICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
ICL + + LPC HH+HS CI KWLK+ + CP+CKY ++ N
Sbjct: 157 SICLDEFVVNDLIRTLPCIHHYHSDCIEKWLKIKSVCPVCKYEVVFDN 204
>gi|300796903|ref|NP_001179251.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470869|tpg|DAA12984.1| TPA: ring finger protein, LIM domain interacting-like isoform 1
[Bos taurus]
gi|296470870|tpg|DAA12985.1| TPA: ring finger protein, LIM domain interacting-like isoform 2
[Bos taurus]
Length = 611
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 557 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 608
>gi|327288909|ref|XP_003229167.1| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like [Anolis
carolinensis]
Length = 586
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 532 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 577
>gi|395755323|ref|XP_002832944.2| PREDICTED: RING finger protein 44, partial [Pongo abelii]
Length = 344
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 262 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 294
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 295 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 333
>gi|332239684|ref|XP_003269028.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 613
>gi|221107761|ref|XP_002159670.1| PREDICTED: uncharacterized protein LOC100214627 [Hydra
magnipapillata]
Length = 261
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
L A CCIC Y ++ PCNH +HS C++ WLK+ +TCP C+Y++ +
Sbjct: 36 LASKASCCICFGEYTLNEDILQFPCNHFYHSACVLNWLKIKSTCPTCRYDLTQ 88
>gi|355731010|gb|AES10385.1| zinc and ring finger 3 [Mustela putorius furo]
Length = 424
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|224043224|ref|XP_002192257.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Taeniopygia guttata]
Length = 664
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C++ Y G +L LPC H FH CI +WL N+TCP+C+ +L N
Sbjct: 611 CSVCINEYATGNKLRQLPCAHEFHIHCIDRWLSENSTCPICRQPVLGSN 659
>gi|444729454|gb|ELW69870.1| RING finger protein 38 [Tupaia chinensis]
Length = 121
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 39 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 71
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 72 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 110
>gi|229595736|ref|XP_001031046.3| zinc finger protein [Tetrahymena thermophila]
gi|225565407|gb|EAR83383.3| zinc finger protein [Tetrahymena thermophila SB210]
Length = 556
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 305 DAECCICLSSYEDGTELHALPCN--HHFHSTCIVKWLKMNATCPLCKYNI 352
D EC IC Y E+ LPCN HHFH CI+ WL +N TCPLC++N
Sbjct: 380 DTECTICRMDYVIDEEITILPCNELHHFHKDCIMSWLNVNMTCPLCRHNF 429
>gi|357481395|ref|XP_003610983.1| RING-H2 zinc finger protein [Medicago truncatula]
gi|355512318|gb|AES93941.1| RING-H2 zinc finger protein [Medicago truncatula]
Length = 340
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 305 DAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
D C ICLS Y+ L ++P CNHHFH+ CI WLKMNATCPLCK
Sbjct: 291 DNVCSICLSEYKPMETLRSIPQCNHHFHADCIDVWLKMNATCPLCK 336
>gi|225637511|ref|NP_001139498.1| RING finger protein 44 isoform 2 [Mus musculus]
gi|123784632|sp|Q3UHJ8.1|RNF44_MOUSE RecName: Full=RING finger protein 44
gi|74181211|dbj|BAE27859.1| unnamed protein product [Mus musculus]
Length = 407
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 325 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 357
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 358 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 396
>gi|242057653|ref|XP_002457972.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
gi|241929947|gb|EES03092.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
Length = 374
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY A Q A EA + LPK+R K VP + +
Sbjct: 201 LYLTAAQREAVEALIQELPKFRL--------------KAVPTDC---------------S 231
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 232 ECPICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 278
>gi|225637509|ref|NP_001139497.1| RING finger protein 44 isoform 1 [Mus musculus]
Length = 432
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|395546427|ref|XP_003775089.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Sarcophilus harrisii]
Length = 618
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 564 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLTSGNRE 615
>gi|148223081|ref|NP_001082725.1| E3 ubiquitin-protein ligase RNF12-A [Xenopus laevis]
gi|82198038|sp|Q641J8.1|RF12A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-A; AltName:
Full=RING finger protein 12-A; AltName: Full=XRnf12
gi|51950095|gb|AAH82339.1| XRnf12 protein [Xenopus laevis]
Length = 622
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 613
>gi|115462059|ref|NP_001054629.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|51038194|gb|AAT93997.1| unknow protein [Oryza sativa Japonica Group]
gi|113578180|dbj|BAF16543.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|215706903|dbj|BAG93363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630174|gb|EEE62306.1| hypothetical protein OsJ_17095 [Oryza sativa Japonica Group]
Length = 386
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY A Q A EA + LPK+R K VP + +
Sbjct: 202 LYLTAAQREAVEALIQELPKFRL--------------KAVPTDC---------------S 232
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 233 ECPICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 279
>gi|224063645|ref|XP_002301244.1| predicted protein [Populus trichocarpa]
gi|222842970|gb|EEE80517.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 287 PIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATC 345
P++ + E + E +C ICL YE+G ++ LPC+H +H +C+ KWLK ++ C
Sbjct: 291 PLKNYKKFQGTENVAQHEQ-QCHICLVDYEEGDKIRVLPCSHEYHMSCVDKWLKEIHGVC 349
Query: 346 PLCKYNILKGN 356
PLC+ + KGN
Sbjct: 350 PLCRDGVCKGN 360
>gi|413948218|gb|AFW80867.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY A Q A EA + LPK+R K VP + +
Sbjct: 201 LYLTAAQREAVEALIQELPKFRL--------------KAVPTDC---------------S 231
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 232 ECLICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 278
>gi|432878751|ref|XP_004073396.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oryzias
latipes]
Length = 602
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 548 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 593
>gi|115456155|ref|NP_001051678.1| Os03g0812200 [Oryza sativa Japonica Group]
gi|32129334|gb|AAP73861.1| unknown protein [Oryza sativa Japonica Group]
gi|40786589|gb|AAR89864.1| putative ring finger protein [Oryza sativa Japonica Group]
gi|108711712|gb|ABF99507.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113550149|dbj|BAF13592.1| Os03g0812200 [Oryza sativa Japonica Group]
gi|125546172|gb|EAY92311.1| hypothetical protein OsI_14036 [Oryza sativa Indica Group]
gi|125588365|gb|EAZ29029.1| hypothetical protein OsJ_13080 [Oryza sativa Japonica Group]
gi|215695293|dbj|BAG90484.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765742|dbj|BAG87439.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 369
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C +CL +E GTE +PC H FHS CI+ WL+++++CP+C++ +
Sbjct: 255 CSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQL 299
>gi|33411670|dbj|BAC81441.1| XRnf12 [Xenopus laevis]
Length = 616
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 562 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 607
>gi|417411075|gb|JAA51991.1| Putative ring finger protein 44, partial [Desmodus rotundus]
Length = 482
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 27/101 (26%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G S+AD+ LP YRF N D + +E+ L C +
Sbjct: 400 AKPRGLSKADIEQLPAYRF---NPDSR------------------QSEQTL------CVV 432
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
C S +E L LPC H FH+ C+ KWLK N TCP+C+ +
Sbjct: 433 CFSDFEVRQLLRVLPCGHEFHAKCVDKWLKANRTCPICRAD 473
>gi|332263048|ref|XP_003280568.1| PREDICTED: RING finger protein 44 [Nomascus leucogenys]
Length = 423
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ +G+ + C +
Sbjct: 341 AKPRGLTKADIEQLPSYRFNPDSHQ------SGQTL---------------------CVV 373
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 374 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 412
>gi|125569906|gb|EAZ11421.1| hypothetical protein OsJ_01289 [Oryza sativa Japonica Group]
Length = 278
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D+ C +CL Y G +PC H FH+ CIV WLKM+++CP+C++ +
Sbjct: 159 DSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQL 206
>gi|387019685|gb|AFJ51960.1| e3 ubiquitin-protein ligase RNF12-A-like [Crotalus adamanteus]
Length = 607
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 553 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 598
>gi|354471969|ref|XP_003498213.1| PREDICTED: RING finger protein 44 isoform 1 [Cricetulus griseus]
Length = 432
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|354471971|ref|XP_003498214.1| PREDICTED: RING finger protein 44 isoform 2 [Cricetulus griseus]
Length = 433
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 351 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 383
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 384 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 422
>gi|225463026|ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263653 [Vitis vinifera]
Length = 542
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
A+C ICL+ YE+G ++ LPC+H +H +C+ KWLK ++ CPLC+ ++ +G
Sbjct: 478 AQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREG 528
>gi|297791661|ref|XP_002863715.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309550|gb|EFH39974.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 682
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 303 PEDAE-CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
P+D E CCIC Y +G ++ L C H FHS CI +WLK CP+CK L
Sbjct: 622 PQDTEPCCICQEEYNEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKTTGLN 674
>gi|147858550|emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]
Length = 542
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
A+C ICL+ YE+G ++ LPC+H +H +C+ KWLK ++ CPLC+ ++ +G
Sbjct: 478 AQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREG 528
>gi|402883881|ref|XP_003905425.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 1 [Papio
anubis]
Length = 943
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 343
>gi|303388944|ref|XP_003072705.1| hypothetical protein Eint_040550 [Encephalitozoon intestinalis ATCC
50506]
gi|303301847|gb|ADM11345.1| hypothetical protein Eint_040550 [Encephalitozoon intestinalis ATCC
50506]
Length = 246
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC +Y G +L LPC HHFH CI +WL + TCPLCK NI
Sbjct: 187 HCAICFDNYIPGIKLKLLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|224144048|ref|XP_002325167.1| predicted protein [Populus trichocarpa]
gi|222866601|gb|EEF03732.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
ED +C ICL+ YE+G ++ LPC+H +H C+ KWLK ++ CPLC+ ++ +G
Sbjct: 121 EDEQCYICLAEYEEGDKIRVLPCHHEYHMVCVDKWLKEIHGVCPLCRGDVREG 173
>gi|403290098|ref|XP_003936169.1| PREDICTED: RING finger protein 44 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 348
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 266 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 298
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 299 CFSDFEVRQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 337
>gi|301621590|ref|XP_002940130.1| PREDICTED: RING finger protein 6-like [Xenopus (Silurana)
tropicalis]
Length = 156
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 299 RILLPEDAE-CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
R++ ED + C ICLS Y+ G E ++LPCNHHFH+ C+ +WL CPLC+
Sbjct: 99 RVVGEEDEDFCIICLSDYKSGEEAYSLPCNHHFHARCLTEWLIERPVCPLCR 150
>gi|71994179|ref|NP_499473.2| Protein Y47D3B.11 [Caenorhabditis elegans]
gi|30424367|emb|CAB54384.2| Protein Y47D3B.11 [Caenorhabditis elegans]
Length = 487
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
AGQ+ + + + L ++R + L V G + + + + A ER C I
Sbjct: 269 AGQKKKTSSTFARLKQHRSSSSRHSSYLAV-FGSLTSVAQSSSHSAQER--------CVI 319
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
CL YE+GTEL L C H FH C+ WL CPLC+++++
Sbjct: 320 CLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCPLCQFDVV 362
>gi|37360244|dbj|BAC98100.1| mKIAA1100 protein [Mus musculus]
Length = 384
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 302 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 334
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 335 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 373
>gi|413946885|gb|AFW79534.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413946886|gb|AFW79535.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 246 ILYAVAGQEGASEADLSILPKYRFEVQ----NNDEKLGVGAGK------MVPIETNGGYV 295
I A G+ G + D + P VQ N+ + G K M +E GG
Sbjct: 155 IGAAGGGEHGVALGDYFLGPSLDALVQQLAENDAGRHGTPPAKKEAVEAMPTVEIAGGNG 214
Query: 296 ANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
++ + A C +CL Y G +PC H FHS CIV WL+M+++CP+C++ +
Sbjct: 215 NDD-----DTASCPVCLEDYAAGERAREMPCRHRFHSNCIVPWLEMHSSCPVCRFQL 266
>gi|260818404|ref|XP_002604373.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
gi|229289699|gb|EEN60384.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
Length = 446
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC+ Y+ G +L +PC H FHS C+ +WLK N +CP+C+ +
Sbjct: 387 CTICMVEYKTGNKLRRMPCAHEFHSKCVDRWLKQNGSCPVCRQQV 431
>gi|148708580|gb|EDL40527.1| mCG14691, isoform CRA_a [Mus musculus]
Length = 246
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 154
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 155 AVQALEKMETRKFNSKSKGR-----REGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 209
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
PC H FH C+ WL + TCP C++NI+
Sbjct: 210 PCTHRFHRKCVDPWLLQHHTCPHCRHNII 238
>gi|410914034|ref|XP_003970493.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Takifugu
rubripes]
Length = 661
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 607 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 652
>gi|397498914|ref|XP_003820218.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Pan paniscus]
Length = 836
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 154
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 155 AVQALEKMETRKFNSKSKGRR-----EGSCAALDTLSSSSTSDCAICLEKYIDGEELRVI 209
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 210 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|226509910|ref|NP_001148003.1| protein binding protein [Zea mays]
gi|195615070|gb|ACG29365.1| protein binding protein [Zea mays]
gi|219884259|gb|ACL52504.1| unknown [Zea mays]
gi|413946887|gb|AFW79536.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 349
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 246 ILYAVAGQEGASEADLSILPKYRFEVQ----NNDEKLGVGAGK------MVPIETNGGYV 295
I A G+ G + D + P VQ N+ + G K M +E GG
Sbjct: 155 IGAAGGGEHGVALGDYFLGPSLDALVQQLAENDAGRHGTPPAKKEAVEAMPTVEIAGGNG 214
Query: 296 ANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
++ + A C +CL Y G +PC H FHS CIV WL+M+++CP+C++ +
Sbjct: 215 NDD-----DTASCPVCLEDYAAGERAREMPCRHRFHSNCIVPWLEMHSSCPVCRFQL 266
>gi|189527584|ref|XP_686027.3| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like isoform 1
[Danio rerio]
Length = 632
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 578 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 623
>gi|168034252|ref|XP_001769627.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679169|gb|EDQ65620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 306
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
YV + + + + +C +C YE G ++ LPC HH+HS CI +WL+ N CP+C +
Sbjct: 234 YVPDSKDISTDQEQCVVCRLEYEKGDKMLRLPCKHHYHSECIQQWLQHNKVCPVCSAEV 292
>gi|297745339|emb|CBI40419.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 209 WLAVVFLAFDVFFAI-FCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKY 267
+L+ + L + + A F V+L+ ++ + CC ++ ++ A+ +D +LP+
Sbjct: 84 YLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSRNPASAANSSDGIVLPRI 143
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP-C 326
F ++ DE V G + + + D+ C ICL Y+D L LP C
Sbjct: 144 IFVAEDEDEDQNVVVGLDQAVIDSYPKFPFSKSNTHLDSVCSICLCEYKDSEMLRMLPDC 203
Query: 327 NHHFHSTCIVKWLKMNATCPLCKYNIL 353
H FH C+ WLK+NA+CP+C+ + L
Sbjct: 204 RHCFHLYCVDAWLKLNASCPVCRNSPL 230
>gi|334349289|ref|XP_001362311.2| PREDICTED: hypothetical protein LOC100009881 isoform 2 [Monodelphis
domestica]
Length = 349
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 295 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLTSGNRE 346
>gi|118403784|ref|NP_001072864.1| E3 ubiquitin-protein ligase ZNRF3 precursor [Xenopus (Silurana)
tropicalis]
gi|123884550|sp|Q08D68.1|ZNRF3_XENTR RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
gi|115313443|gb|AAI23918.1| hypothetical protein MGC145215 [Xenopus (Silurana) tropicalis]
Length = 853
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C ICL Y DG EL +PC H FH C+ WL N TCP C++NI++
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIE 312
>gi|297853254|ref|XP_002894508.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297340350|gb|EFH70767.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 259 ADLSILPKYRFEVQ----NNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
D I P + +Q N+ + G K +E G + + + +C +CL
Sbjct: 176 GDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALG------TVKIEDTLQCSVCLDD 229
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+E GTE +PC H FH C++ WL+++++CP+C+Y +
Sbjct: 230 FEIGTEAKLMPCEHKFHGDCLLPWLEIHSSCPVCRYQL 267
>gi|356499821|ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 231
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ED+EC +CL + G +PC H FH CI KWL M+ +CP+C+Y +
Sbjct: 115 EDSECVVCLEEFGVGGVAKEMPCKHRFHGNCIEKWLGMHGSCPVCRYEM 163
>gi|224083886|ref|XP_002307159.1| predicted protein [Populus trichocarpa]
gi|222856608|gb|EEE94155.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPE-DAECCICLSSYEDGTELHALPCNHH 329
+N+ + G IE E ++ E + +C +C +E G E+ +PC H
Sbjct: 157 AENDPNRYGTPPASKTAIEALPTMKVTEEMMKSEMNNQCAVCKDEFESGEEVKGMPCKHV 216
Query: 330 FHSTCIVKWLKMNATCPLCKYNI 352
FH CI+ WLKM+ +CP+C+Y +
Sbjct: 217 FHEDCIMPWLKMHNSCPVCRYEL 239
>gi|332801080|ref|NP_001193927.1| E3 ubiquitin-protein ligase ZNRF3 isoform 1 precursor [Homo
sapiens]
gi|126253847|sp|Q9ULT6.3|ZNRF3_HUMAN RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName: Full=RING
finger protein 203; AltName: Full=Zinc/RING finger
protein 3; Flags: Precursor
gi|119580172|gb|EAW59768.1| hCG40978, isoform CRA_b [Homo sapiens]
gi|119580173|gb|EAW59769.1| hCG40978, isoform CRA_b [Homo sapiens]
Length = 936
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 343
>gi|294911925|ref|XP_002778099.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239886220|gb|EER09894.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 313
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C +C+ S + G L LPC H +H+ CI +WLK + TCP+CK +IL G
Sbjct: 239 CAVCMDSLKKGEMLRTLPCMHRYHAACIDEWLKSSPTCPVCKTSILMG 286
>gi|167520240|ref|XP_001744459.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776790|gb|EDQ90408.1| predicted protein [Monosiga brevicollis MX1]
Length = 90
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
EC IC + YED EL+ LPC+H FH+ CI WL+ + CPLC++ + +E
Sbjct: 12 ECAICKAPYEDKAELYELPCDHVFHTICIGAWLERTSQCPLCRHQLPTDDE 62
>gi|357124388|ref|XP_003563882.1| PREDICTED: uncharacterized protein LOC100832937 [Brachypodium
distachyon]
Length = 399
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C +CL +E GTE +PC H FHS CI+ WL+++++CP+C++ +
Sbjct: 284 CTVCLEEFEMGTEAKEMPCQHKFHSHCILPWLELHSSCPICRFQL 328
>gi|344240393|gb|EGV96496.1| RING finger protein 44 [Cricetulus griseus]
Length = 351
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 340
>gi|255626575|gb|ACU13632.1| unknown [Glycine max]
Length = 187
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ED+EC +CL + G +PC H FH CI KWL M+ +CP+C+Y +
Sbjct: 115 EDSECVVCLEEFGVGGVAKEMPCKHRFHGNCIEKWLGMHGSCPVCRYEM 163
>gi|222624843|gb|EEE58975.1| hypothetical protein OsJ_10676 [Oryza sativa Japonica Group]
Length = 364
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGY---VANE--------------------RILLPEDAE 307
+Q++DE G G++ P GY AN R+ A
Sbjct: 196 LQDDDEAGGKRPGQLGPRAARSGYPPRTANGAAATGTPPARKEAVAALPTVRVHDAAGAT 255
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
C +CL +E G E +PC H FH CI+ WL+ +++CP+C+Y + +E
Sbjct: 256 CPVCLDEFEAGGEAREMPCKHRFHDGCILPWLEAHSSCPVCRYQLPTDDE 305
>gi|218196079|gb|EEC78506.1| hypothetical protein OsI_18434 [Oryza sativa Indica Group]
Length = 394
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY A Q A EA + LPK+R K VP + +
Sbjct: 212 LYLTAAQREAVEALIQELPKFRL--------------KAVPTDCS--------------- 242
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 243 ECPICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 289
>gi|13195721|dbj|BAB33319.1| KIAA1133 protein [Homo sapiens]
Length = 891
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 248 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 298
>gi|18204309|gb|AAH21570.1| ZNRF3 protein, partial [Homo sapiens]
Length = 653
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
++C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 8 SDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 60
>gi|67078432|ref|NP_001019966.1| RING finger protein 44 [Rattus norvegicus]
gi|81908627|sp|Q4V7B8.1|RNF44_RAT RecName: Full=RING finger protein 44
gi|66911650|gb|AAH98030.1| Ring finger protein 44 [Rattus norvegicus]
gi|149039917|gb|EDL94033.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
gi|149039918|gb|EDL94034.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
gi|149039919|gb|EDL94035.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
Length = 350
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 268 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 300
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 301 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
>gi|358420980|ref|XP_003584785.1| PREDICTED: LOW QUALITY PROTEIN: zinc/RING finger protein 3 [Bos
taurus]
Length = 756
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 41/256 (16%)
Query: 101 PSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGI 160
P + + +CG C + +R T + D E +N SED + +
Sbjct: 7 PVSDFQGQLCGNVPTCSFSLSQAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPV 66
Query: 161 VYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRL---YWLAVVFLAF 217
VY K ++I M IV V + PR Y+ +FLAF
Sbjct: 67 VY--------VKGADAIKLMN-----IVNKQKVARA--RIQHRPPRQPTEYFDMGIFLAF 111
Query: 218 DVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEK 277
V ++ C++L L+ I L ++ S+ ++ L E +
Sbjct: 112 FVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRLAVQALEKMETRKF 153
Query: 278 LGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVK 337
G+ G A + + ++C ICL Y DG EL +PC H FH C+
Sbjct: 154 NSKSKGRR-----EGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDP 208
Query: 338 WLKMNATCPLCKYNIL 353
WL + TCP C++NI+
Sbjct: 209 WLLQHHTCPHCRHNII 224
>gi|357487061|ref|XP_003613818.1| RING finger protein [Medicago truncatula]
gi|355515153|gb|AES96776.1| RING finger protein [Medicago truncatula]
Length = 218
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 278 LGVGAGKMVPIETNGGYVANERILLPED--AECCICLSSYEDGTELHALPCNHHFHSTCI 335
LG P T A E+I + E EC +CL +E G + +PC H FH CI
Sbjct: 73 LGSATKTGQPPATKESIEAMEKIEIEEGDGGECVVCLEEFEVGGVVKEMPCKHRFHGKCI 132
Query: 336 VKWLKMNATCPLCKYNI 352
KWL ++ +CP+C+Y++
Sbjct: 133 EKWLGIHGSCPVCRYHM 149
>gi|344256183|gb|EGW12287.1| Zinc/RING finger protein 3 [Cricetulus griseus]
Length = 672
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
++C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 45 SDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 97
>gi|195539967|gb|AAI67972.1| Unknown (protein for IMAGE:7068139) [Danio rerio]
Length = 711
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C +C++ Y G +L LPC H FH CI +WL N TCP+C+ IL +++
Sbjct: 661 CSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILSSHQE 711
>gi|311270846|ref|XP_001925877.2| PREDICTED: zinc/RING finger protein 3 [Sus scrofa]
Length = 815
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|281364272|ref|NP_523864.3| goliath, isoform C [Drosophila melanogaster]
gi|386768647|ref|NP_001246517.1| goliath, isoform E [Drosophila melanogaster]
gi|272432706|gb|AAF47316.2| goliath, isoform C [Drosophila melanogaster]
gi|383302707|gb|AFH08270.1| goliath, isoform E [Drosophila melanogaster]
Length = 461
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEK----LGVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G ++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>gi|357481399|ref|XP_003610985.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
gi|355512320|gb|AES93943.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
Length = 361
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 305 DAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
D C ICLS Y+ L ++P CNHHFH+ CI WLKMNATCPLC+
Sbjct: 312 DNVCSICLSEYKPMETLRSIPQCNHHFHADCIDVWLKMNATCPLCR 357
>gi|440790455|gb|ELR11738.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 301
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLC 348
E+A+C ICL YE G LPCNHHFH CI +WL + TCPLC
Sbjct: 245 ENAQCSICLLDYEPGEHYRTLPCNHHFHQPCIDRWLSDHDTCPLC 289
>gi|432872871|ref|XP_004072166.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3-like [Oryzias latipes]
Length = 870
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 268 CAICLEKYMDGEELRVIPCAHRFHKRCVDPWLLQHHTCPHCRHNIIGEKGN 318
>gi|348516947|ref|XP_003445998.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oreochromis
niloticus]
Length = 675
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 621 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 666
>gi|225637513|ref|NP_001139499.1| RING finger protein 44 isoform 3 [Mus musculus]
gi|74179060|dbj|BAE42740.1| unnamed protein product [Mus musculus]
Length = 351
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 340
>gi|358337630|dbj|GAA33104.2| RING finger protein 38 [Clonorchis sinensis]
Length = 1239
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
D C ICL YE L A+ C H FH+ C+ KWLK TCPLC+ + G ++
Sbjct: 1181 DDRCMICLDDYESKDLLRAMRCRHEFHAKCVDKWLKTKRTCPLCRADAFDGTQR 1234
>gi|403295171|ref|XP_003938526.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Saimiri boliviensis
boliviensis]
Length = 833
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|242041429|ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
gi|241921963|gb|EER95107.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
Length = 280
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 257 SEADLSILPKYRFEVQ----NNDEKLGVGAGKMVPIETNGGYVANERIL-------LPED 305
SE +++ LP ++++VQ N + G ++ T G + L PED
Sbjct: 155 SEEEINSLPVFKYKVQAQQGNAPAQKSDGPSQLSVSSTGSGNEKKQDGLKSDGTSKTPED 214
Query: 306 A-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C +CL G L +LPC H FH CI WL+ TCP+CK+ + G
Sbjct: 215 ELTCSVCLEQVAVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSDG 265
>gi|426393971|ref|XP_004063277.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 1 [Gorilla
gorilla gorilla]
gi|426393973|ref|XP_004063278.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Gorilla
gorilla gorilla]
Length = 838
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|17160934|gb|AAH17630.1| Ring finger protein 44 [Mus musculus]
gi|23272022|gb|AAH35548.1| Ring finger protein 44 [Mus musculus]
Length = 339
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 257 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 289
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 290 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 328
>gi|225637515|ref|NP_598825.2| RING finger protein 44 isoform 4 [Mus musculus]
gi|74213634|dbj|BAE35621.1| unnamed protein product [Mus musculus]
gi|74213677|dbj|BAE35639.1| unnamed protein product [Mus musculus]
gi|148709209|gb|EDL41155.1| ring finger protein 44, isoform CRA_a [Mus musculus]
gi|148709210|gb|EDL41156.1| ring finger protein 44, isoform CRA_a [Mus musculus]
gi|148709211|gb|EDL41157.1| ring finger protein 44, isoform CRA_a [Mus musculus]
Length = 350
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 268 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 300
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 301 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
>gi|402883883|ref|XP_003905426.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Papio
anubis]
Length = 843
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|326679661|ref|XP_003201353.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Danio rerio]
Length = 750
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C +C++ Y G +L LPC H FH CI +WL N TCP+C+ IL +++
Sbjct: 700 CSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILSSHQE 750
>gi|441618929|ref|XP_004092942.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ZNRF3
[Nomascus leucogenys]
Length = 837
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|395834038|ref|XP_003790023.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Otolemur garnettii]
Length = 949
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 308 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 358
>gi|432102802|gb|ELK30276.1| RING finger protein 44 [Myotis davidii]
Length = 457
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 375 AKPRGLTKADIEQLPAYRFNPDSHQS---------------------------EQTLCVV 407
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPC+H FH+ C+ KWLK N TCP+C+
Sbjct: 408 CFSDFEARQLLRVLPCSHEFHTKCVDKWLKANRTCPICR 446
>gi|431896576|gb|ELK05988.1| RING finger protein 115 [Pteropus alecto]
Length = 305
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
EC +C Y G E+ LPCNH FHS+CIV WL+++ TCP+C+ ++
Sbjct: 228 ECSVCKEDYTVGEEVRQLPCNHFFHSSCIVPWLELHDTCPICRKSL 273
>gi|357129287|ref|XP_003566296.1| PREDICTED: uncharacterized protein LOC100838775 [Brachypodium
distachyon]
Length = 690
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL YE+G + LPCNH FH TC+ KWLK ++ CPLC+ ++ + +
Sbjct: 629 EAAQCYICLVEYEEGDCVRVLPCNHEFHLTCVDKWLKEIHRVCPLCRGDVCRSD 682
>gi|356561335|ref|XP_003548938.1| PREDICTED: uncharacterized protein LOC100790855 [Glycine max]
Length = 336
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G+S DL + + +Q+ + G + P A + E +C +CL
Sbjct: 173 GSSLNDLVVGSGFDLLLQHLAQIGPGGYSSVNPPAQKAAIEALPSVTSEEKLQCTVCLED 232
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
E G+E +PC H FH CIV WLK++ +CP+C++ +
Sbjct: 233 VEVGSEAKEMPCKHKFHGDCIVSWLKLHGSCPVCRFQM 270
>gi|297708536|ref|XP_002831020.1| PREDICTED: zinc/RING finger protein 3 [Pongo abelii]
Length = 833
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|193788386|dbj|BAG53280.1| unnamed protein product [Homo sapiens]
Length = 836
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|431920869|gb|ELK18640.1| Zinc/RING finger protein 3 [Pteropus alecto]
Length = 812
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 169 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 219
>gi|355563554|gb|EHH20116.1| hypothetical protein EGK_02907 [Macaca mulatta]
Length = 843
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|332017271|gb|EGI58040.1| E3 ubiquitin-protein ligase rnf181 [Acromyrmex echinatior]
Length = 146
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 280 VGAGKMVPIETNGGYVANE---RILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIV 336
VG +P + VAN +I E+ +C +CL +E G + ++PC H FH CI+
Sbjct: 38 VGQDTELPPPASKNAVANLPEIKIESNENKQCPVCLKEFEIGNKAKSMPCQHVFHQECII 97
Query: 337 KWLKMNATCPLCKYNILKGNE 357
WL+ +CPLC+Y + +E
Sbjct: 98 PWLEKTNSCPLCRYELPTDDE 118
>gi|150378447|ref|NP_115549.2| E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Homo sapiens]
gi|47678325|emb|CAG30283.1| bK175E3.6 [Homo sapiens]
gi|109451050|emb|CAK54386.1| ZNRF3 [synthetic construct]
gi|109451628|emb|CAK54685.1| ZNRF3 [synthetic construct]
gi|168269698|dbj|BAG09976.1| zinc/RING finger protein 3 precursor [synthetic construct]
gi|189442382|gb|AAI67805.1| Zinc and ring finger 3 [synthetic construct]
Length = 836
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|3822225|gb|AAC69857.1| RING-H2 finger protein RHG1a, partial [Arabidopsis thaliana]
Length = 190
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 303 PEDAE-CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
P+DAE CC+C Y +G ++ L C H FHS CI +WLK CP+CK
Sbjct: 130 PQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIEEWLKQKNLCPICK 177
>gi|73995396|ref|XP_543465.2| PREDICTED: zinc/RING finger protein 3 [Canis lupus familiaris]
Length = 842
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|19745198|ref|NP_604462.1| RING finger protein 38 [Rattus norvegicus]
gi|19423292|gb|AAL88459.1|AF480444_1 RING finger protein OIP1 [Rattus norvegicus]
Length = 432
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 350 AKPRGLTKADIEQLPFYRFNPSNHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 421
>gi|449329011|gb|AGE95286.1| hypothetical protein ECU04_0610 [Encephalitozoon cuniculi]
Length = 246
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC +Y G +L LPC HHFH CI +WL + TCPLCK NI
Sbjct: 187 HCTICFDNYIPGIKLKFLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|19074138|ref|NP_584744.1| hypothetical protein ECU04_0610 [Encephalitozoon cuniculi GB-M1]
gi|19068780|emb|CAD25248.1| hypothetical protein [Encephalitozoon cuniculi GB-M1]
Length = 246
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC +Y G +L LPC HHFH CI +WL + TCPLCK NI
Sbjct: 187 HCTICFDNYIPGIKLKFLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|351721208|ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycine max]
gi|255632902|gb|ACU16805.1| unknown [Glycine max]
Length = 101
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
ED+ CC+CLS + E+ LPC+H FH C+ KWLK + TCPLC++++
Sbjct: 24 EDSWCCVCLSRLKAKDEIRVLPCSHKFHKICVNKWLKGRHKTCPLCRFSM 73
>gi|296812421|ref|XP_002846548.1| ring finger protein 126 [Arthroderma otae CBS 113480]
gi|238841804|gb|EEQ31466.1| ring finger protein 126 [Arthroderma otae CBS 113480]
Length = 436
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
AEC IC+ S E GTE+ LPC H FH TCI WL + TCP C+ I+
Sbjct: 295 AECSICMDSVEVGTEVTMLPCKHWFHDTCITAWLNEHDTCPHCRQGIM 342
>gi|296087810|emb|CBI35066.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 297 NERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
+ R+ P D C ICLS Y + ++P CNH FH+ CI +WL+M+ATCP+C+
Sbjct: 94 SRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCFHADCIDEWLRMSATCPICR 147
>gi|224089028|ref|XP_002308607.1| predicted protein [Populus trichocarpa]
gi|222854583|gb|EEE92130.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
E EC +C+S +ED L LP C H FH CI +WLK +++CPLC+Y I
Sbjct: 111 EGLECAVCISKFEDSDVLRLLPKCKHAFHENCIDQWLKSHSSCPLCRYKI 160
>gi|114685663|ref|XP_515054.2| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Pan
troglodytes]
gi|410055753|ref|XP_003953908.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 1 [Pan
troglodytes]
Length = 836
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|224096522|ref|XP_002310643.1| predicted protein [Populus trichocarpa]
gi|222853546|gb|EEE91093.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 272 QNNDEKLGVGAGKMVPIETNGGYVANERILLPE-DAECCICLSSYEDGTELHALPCNHHF 330
+N+ + G IE E ++ E + +C +C +E G E+ +PC H F
Sbjct: 7 ENDPNRYGTPPASKKAIEALPTMKVTEEMMKSEMNNQCAVCKDEFEGGEEVKGMPCKHVF 66
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
H CI+ WL M+ +CP+C+Y +
Sbjct: 67 HEDCIIPWLNMHNSCPVCRYEL 88
>gi|255571091|ref|XP_002526496.1| ring finger protein, putative [Ricinus communis]
gi|223534171|gb|EEF35887.1| ring finger protein, putative [Ricinus communis]
Length = 484
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
+C ICL YE+G E+ LPC+H +H +C+ KWLK ++ CPLC+ ++ KG
Sbjct: 421 QCHICLVDYEEGDEIRVLPCSHEYHVSCVDKWLKEIHGVCPLCRGDVCKG 470
>gi|224137078|ref|XP_002327016.1| predicted protein [Populus trichocarpa]
gi|222835331|gb|EEE73766.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
+ +C ICL YE+G ++ LPC+H FH C+ KWLK ++ CPLC+ ++ KG
Sbjct: 372 EQQCHICLVDYEEGDKIRVLPCSHEFHMACVDKWLKDIHGVCPLCRDDVCKG 423
>gi|218194944|gb|EEC77371.1| hypothetical protein OsI_16099 [Oryza sativa Indica Group]
Length = 386
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILK 354
EC +CL+S++DG +L LP C+H FH CI WL+ TCPLC+ N+ K
Sbjct: 132 ECAVCLTSFDDGDDLRLLPHCSHAFHPECIDPWLESRVTCPLCRANLEK 180
>gi|125535731|gb|EAY82219.1| hypothetical protein OsI_37424 [Oryza sativa Indica Group]
Length = 199
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 35/46 (76%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+++C +CL +E G +L +PC+H FH+TCI+ WL+++ CPLC++
Sbjct: 145 ESDCAVCLEDFEAGEKLRRMPCSHCFHATCILDWLRLSHRCPLCRF 190
>gi|38569180|emb|CAD40832.2| OSJNBa0086B14.4 [Oryza sativa Japonica Group]
gi|116310080|emb|CAH67101.1| H0818E04.18 [Oryza sativa Indica Group]
Length = 387
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILK 354
EC +CL+S++DG +L LP C+H FH CI WL+ TCPLC+ N+ K
Sbjct: 132 ECAVCLTSFDDGDDLRLLPHCSHAFHPECIDPWLESRVTCPLCRANLEK 180
>gi|335305810|ref|XP_001924902.3| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 635
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C IC++ Y +G ++ LPC+H FH CI +WL N+TCP+C+ I+ E+
Sbjct: 581 CSICITEYTEGNKIRILPCSHEFHIHCIDRWLAENSTCPICRGEIVDSRER 631
>gi|255583480|ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
gi|223527773|gb|EEF29874.1| ring finger protein, putative [Ricinus communis]
Length = 550
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 294 YVANERILLPEDAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYN 351
+ ++++ +D E C ICL+ YE+G ++ LPC+H +H C+ KWLK ++ CPLC+ +
Sbjct: 466 HKKEDKVVGSDDVEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGD 525
Query: 352 ILKG 355
+ +G
Sbjct: 526 VRQG 529
>gi|452823951|gb|EME30957.1| hypothetical protein Gasu_17240 [Galdieria sulphuraria]
Length = 406
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C ICL +Y + L LPC H FH CI KWL M+ CPLCK++I +G
Sbjct: 305 CSICLENYSNSDSLRVLPCLHFFHVVCIDKWLMMDKACPLCKWDIDRG 352
>gi|410976828|ref|XP_003994815.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Felis catus]
Length = 841
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|219886001|gb|ACL53375.1| unknown [Zea mays]
gi|413956192|gb|AFW88841.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 280
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 257 SEADLSILPKYRFEVQ---------NNDE--KLGVGAGKMVPIETNGGYVANERILLPED 305
SE +++ LP ++++VQ +DE +L V + + G A+ P+D
Sbjct: 155 SEEEINSLPVFKYKVQAQQGNAPARKSDEASQLSVSSTGSGNEKKQDGLKADGTGKTPQD 214
Query: 306 A-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C +CL G L +LPC H FH CI WL+ TCP+CK+ + G
Sbjct: 215 ELTCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSDG 265
>gi|11994207|dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]
Length = 386
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ + G I+ + +L E +C +C+ +EDG+++ +PC H F
Sbjct: 237 AENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVF 296
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
H C++ WL+++ +CP+C++ +
Sbjct: 297 HQDCLLPWLELHNSCPVCRFEL 318
>gi|388508450|gb|AFK42291.1| unknown [Medicago truncatula]
Length = 202
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 270 EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPED--AECCICLSSYEDGTELHALPCN 327
E+ NN LG P T A E+I + E EC +CL +E G + +PC
Sbjct: 68 ELFNN---LGSATKTGQPPATKESIEAMEKIEIEEGDGGECVVCLEEFEVGGVVKEMPCK 124
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNI 352
H FH CI KWL ++ +CP+C+Y++
Sbjct: 125 HRFHGKCIEKWLGIHGSCPVCRYHM 149
>gi|346973390|gb|EGY16842.1| RING finger protein [Verticillium dahliae VdLs.17]
Length = 679
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 297 NERILLPED-AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
++ +L PE AEC IC+ + G E+ LPC H FH TC+V WLK + TCP+C+ I +
Sbjct: 299 DDEMLGPEGMAECTICIDELKKGEEVVYLPCKHWFHDTCVVMWLKEHNTCPICRTPIEER 358
Query: 356 NE 357
E
Sbjct: 359 TE 360
>gi|225464029|ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Vitis
vinifera]
Length = 174
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 297 NERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYN 351
+ R+ P D C ICLS Y + ++P CNH FH+ CI +WL+M+ATCP+C+ +
Sbjct: 94 SRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCFHADCIDEWLRMSATCPICRSS 149
>gi|356562736|ref|XP_003549625.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 383
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACL-IGIALCCCLPCI 243
W ++G W S + L + + W +++L F + +FC+ AC+ +G L +
Sbjct: 102 WTVIGTLWFSSAKNCLPEVGKK--WGFLIWLLFS-YCGLFCI--ACMSLGKWLTRRQAHL 156
Query: 244 IAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYV------AN 297
+ + E D+ +P + FE + + G G+ G Y+ A
Sbjct: 157 LRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETR---GMGQDAAAYHPGLYLTPAQREAV 213
Query: 298 ERILL----------PED-AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCP 346
E ++L P D +EC ICL + G E+ LPC H+FH CI +WL++N CP
Sbjct: 214 EALILELPKFRLKAVPTDCSECPICLEEFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCP 273
Query: 347 LCKYNIL 353
C+ ++
Sbjct: 274 RCRCSVF 280
>gi|118380318|ref|XP_001023323.1| hypothetical protein TTHERM_00444600 [Tetrahymena thermophila]
gi|89305090|gb|EAS03078.1| hypothetical protein TTHERM_00444600 [Tetrahymena thermophila
SB210]
Length = 694
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
+C ICL++Y+D L LPC H FH CI KWL N+ C +CK+++L Q
Sbjct: 640 QDCSICLNNYQDKEILRVLPCEHRFHRACIDKWLLQNSKCVICKFDLLSNQNQ 692
>gi|410923527|ref|XP_003975233.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3-like [Takifugu
rubripes]
Length = 931
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL---KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 310 CAICLEKYMDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNIIEQKKGN 361
>gi|260782279|ref|XP_002586217.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
gi|229271313|gb|EEN42228.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
Length = 619
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C +C++ Y +G+ L LPC H FH+ C+ +WL +NA+CP+C++ +
Sbjct: 571 CNVCITDYIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 615
>gi|426236993|ref|XP_004012446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF43
[Ovis aries]
Length = 729
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 320
>gi|351706631|gb|EHB09550.1| RING finger protein 43 [Heterocephalus glaber]
Length = 819
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 309 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 357
>gi|432105127|gb|ELK31496.1| Zinc/RING finger protein 3 [Myotis davidii]
Length = 881
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 235 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 285
>gi|300794551|ref|NP_001178123.1| RING finger protein 43 precursor [Bos taurus]
gi|296477075|tpg|DAA19190.1| TPA: ring finger protein 43 [Bos taurus]
Length = 783
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 320
>gi|383143729|gb|AFG53317.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143730|gb|AFG53318.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
Length = 146
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%)
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ +L+ + +C +C +E GTE+ +PC H +HS CI+ WL+ + +CP+C+Y +
Sbjct: 7 QDLLVTDSTQCAVCKDEFEVGTEVRQMPCKHMYHSVCILPWLEQHNSCPVCRYEM 61
>gi|440902011|gb|ELR52860.1| RING finger protein 43 [Bos grunniens mutus]
Length = 783
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 320
>gi|383143719|gb|AFG53307.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143720|gb|AFG53308.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143721|gb|AFG53309.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143722|gb|AFG53310.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143723|gb|AFG53311.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143724|gb|AFG53312.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143725|gb|AFG53313.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143726|gb|AFG53314.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143727|gb|AFG53315.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143728|gb|AFG53316.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143731|gb|AFG53319.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
gi|383143732|gb|AFG53320.1| Pinus taeda anonymous locus 0_8445_01 genomic sequence
Length = 146
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%)
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ +L+ + +C +C +E GTE+ +PC H +HS CI+ WL+ + +CP+C+Y +
Sbjct: 7 QDLLVTDSTQCAVCKDEFEVGTEVRQMPCKHMYHSVCILPWLEQHNSCPVCRYEM 61
>gi|281344904|gb|EFB20488.1| hypothetical protein PANDA_021707 [Ailuropoda melanoleuca]
Length = 612
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C IC++ Y +G L LPC+H FH CI +WL N+TCPLC+
Sbjct: 560 CTICITEYTEGNRLRILPCSHEFHVHCIDRWLSENSTCPLCR 601
>gi|301792106|ref|XP_002931020.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
Length = 614
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C IC++ Y +G L LPC+H FH CI +WL N+TCPLC+
Sbjct: 560 CTICITEYTEGNRLRILPCSHEFHVHCIDRWLSENSTCPLCR 601
>gi|353231520|emb|CCD77938.1| unnamed protein product [Schistosoma mansoni]
Length = 1383
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYV-ANERILLPEDAECCICLS 313
G S+ +L LP + +++D + +GK P T V N + + E C ICL
Sbjct: 1279 GLSKEELESLPIRLYTSKHSDS---LSSGK--PNTTICNEVKTNTQNDVSECDRCMICLD 1333
Query: 314 SYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
Y D ++ + C H FH++C+ KWLK TCPLC+ + G++
Sbjct: 1334 DYADSQQIRQMRCLHEFHASCVDKWLKTKRTCPLCRADAFTGSQH 1378
>gi|149720303|ref|XP_001499538.1| PREDICTED: zinc/RING finger protein 3 [Equus caballus]
Length = 838
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 243
>gi|344285791|ref|XP_003414643.1| PREDICTED: RING finger protein 43 [Loxodonta africana]
Length = 785
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 320
>gi|8570055|dbj|BAA96760.1| putative C-terminal zinc-finger [Oryza sativa Japonica Group]
gi|9757680|dbj|BAB08199.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187559|gb|EEC69986.1| hypothetical protein OsI_00495 [Oryza sativa Indica Group]
gi|222617777|gb|EEE53909.1| hypothetical protein OsJ_00461 [Oryza sativa Japonica Group]
Length = 488
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+D +C ICL Y+D + L L CNH FH+ C+ KWLK +CP+CK
Sbjct: 439 DDGKCAICLEEYKDNSLLGILKCNHDFHTDCVKKWLKEKNSCPICK 484
>gi|255564802|ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
gi|223537345|gb|EEF38974.1| zinc finger protein, putative [Ricinus communis]
Length = 394
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ + ++C +CL +E GTE +PC H FH CI+ WL+++++CP+C++ +
Sbjct: 233 VTIKNTSQCSVCLDDFEIGTEAKEMPCKHRFHDVCILPWLELHSSCPVCRFQL 285
>gi|224052857|ref|XP_002297615.1| predicted protein [Populus trichocarpa]
gi|222844873|gb|EEE82420.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+++ E +C +CL +E G++ +PC H FHS CI+ WL+++++CP+C++ +
Sbjct: 219 VIIKEPLQCSVCLDDFEIGSKAREMPCKHKFHSGCILPWLELHSSCPVCRHQL 271
>gi|84994748|ref|XP_952096.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302257|emb|CAI74364.1| hypothetical protein, conserved [Theileria annulata]
Length = 296
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +CL Y+ G E+ LPC H FH CI WLK + CP+CK+N +
Sbjct: 246 CSVCLEEYQQGDEIRRLPCTHSFHKRCIDTWLKKSTICPICKFNYI 291
>gi|395517774|ref|XP_003763048.1| PREDICTED: zinc/RING finger protein 3, partial [Sarcophilus
harrisii]
Length = 613
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+
Sbjct: 153 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQHHTCPHCRHNII 198
>gi|348584628|ref|XP_003478074.1| PREDICTED: zinc/RING finger protein 3-like [Cavia porcellus]
Length = 1056
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI++
Sbjct: 384 CAICLEKYTDGEELRIIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 430
>gi|291236690|ref|XP_002738271.1| PREDICTED: GI18477-like [Saccoglossus kowalevskii]
Length = 155
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
DAECC +C+ Y+ G + LPC H FH C+ +WL + TCP+CK NILK
Sbjct: 13 DAECCAVCIDPYKSGEVIRVLPCKHLFHKACVDQWLVEHRTCPMCKLNILK 63
>gi|301133572|gb|ADK63408.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 355
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 31/108 (28%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPED- 305
LY Q A EA + LPK+R + +P+D
Sbjct: 203 LYLTPAQTEAVEALIQELPKFRLKA------------------------------VPDDC 232
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL ++ G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 233 GECLICLEEFQIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRSSVF 280
>gi|444725962|gb|ELW66511.1| Kremen protein 1 [Tupaia chinensis]
Length = 1280
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 269 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 319
>gi|345323839|ref|XP_001508525.2| PREDICTED: zinc/RING finger protein 3 [Ornithorhynchus anatinus]
Length = 853
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
++C ICL Y DG EL +PC H FH C+ WL + TCP C+++I+ KGN
Sbjct: 191 SDCAICLEKYIDGEELRVIPCTHRFHKKCVDPWLLQHHTCPHCRHSIIEPKGN 243
>gi|326526351|dbj|BAJ97192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL YE+G + LPCNH FH TC+ KWLK ++ CPLC+ ++ + +
Sbjct: 502 ETAQCYICLVEYEEGDCIRILPCNHEFHLTCVDKWLKEIHRVCPLCRGDVCRSD 555
>gi|226507528|ref|NP_001147077.1| RING finger protein 126 [Zea mays]
gi|195607098|gb|ACG25379.1| RING finger protein 126 [Zea mays]
Length = 308
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 286 VPIETNGGYVANERILLPED-AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNAT 344
P T + E +++ E +C +CL +E G E +PC H FHS C++ WL+++++
Sbjct: 202 TPPATKEAVESLETVMVEESLVQCTVCLDDFEIGVEAKEMPCKHKFHSECLLPWLELHSS 261
Query: 345 CPLCKYNILKGNE 357
CP+C+Y + G++
Sbjct: 262 CPVCRYLLPTGDD 274
>gi|341880268|gb|EGT36203.1| hypothetical protein CAEBREN_11800 [Caenorhabditis brenneri]
Length = 483
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 283 GKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN 342
G + + + + A ER C ICL YE+GTEL L C H FH C+ WL
Sbjct: 295 GSLTSVAQSSSHSAQER--------CVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSK 346
Query: 343 ATCPLCKYNIL 353
CPLC+++++
Sbjct: 347 RRCPLCQFDVV 357
>gi|356548563|ref|XP_003542670.1| PREDICTED: uncharacterized protein LOC100783722 [Glycine max]
Length = 540
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 305 DAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGNEQ 358
DAE C ICL+ YE+G ++ LPC H +H +C+ KWLK ++ CPLC+ N+ G+ +
Sbjct: 475 DAEQCYICLADYEEGDQIRVLPCFHEYHMSCVDKWLKEIHGVCPLCRGNVCGGSTE 530
>gi|115434650|ref|NP_001042083.1| Os01g0159300 [Oryza sativa Japonica Group]
gi|113531614|dbj|BAF03997.1| Os01g0159300 [Oryza sativa Japonica Group]
gi|215707150|dbj|BAG93610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|347737071|gb|AEP20518.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 501
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+D +C ICL Y+D + L L CNH FH+ C+ KWLK +CP+CK
Sbjct: 452 DDGKCAICLEEYKDNSLLGILKCNHDFHTDCVKKWLKEKNSCPICK 497
>gi|293334891|ref|NP_001169469.1| LOC100383341 [Zea mays]
gi|224029549|gb|ACN33850.1| unknown [Zea mays]
gi|238015278|gb|ACR38674.1| unknown [Zea mays]
gi|414877040|tpg|DAA54171.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414877041|tpg|DAA54172.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
gi|414877042|tpg|DAA54173.1| TPA: putative RING zinc finger domain superfamily protein isoform 3
[Zea mays]
Length = 346
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 246 ILYAVAGQEGASEADLSILPKYRFEVQ----NNDEKLGVGAGK------MVPIETNGGYV 295
+ A G+ G + D + P VQ N+ + G K M +E GG
Sbjct: 153 FIGAAGGEHGVALGDYFLGPSLDALVQQLAENDAARHGTPPAKKEAVEAMPTVEIAGGND 212
Query: 296 ANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
++ A C +CL Y G +PC H FH CIV WL+M+++CP+C++ +
Sbjct: 213 DDDA------ASCPVCLEDYAPGERAREMPCRHRFHGNCIVPWLEMHSSCPVCRFQL 263
>gi|226490958|ref|NP_001141061.1| uncharacterized protein LOC100273142 [Zea mays]
gi|194702454|gb|ACF85311.1| unknown [Zea mays]
gi|413939328|gb|AFW73879.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 510
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
+C ICL+ YEDG ++ LPC H FH C+ KWLK ++ CPLC+ ++
Sbjct: 459 QCHICLTEYEDGDQIRTLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 505
>gi|209571549|ref|NP_001129393.1| RING finger protein 43 precursor [Rattus norvegicus]
Length = 782
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFTEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 320
>gi|356562902|ref|XP_003549707.1| PREDICTED: uncharacterized protein LOC100783604 [Glycine max]
Length = 541
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 305 DAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
DAE C ICL+ YE+G ++ LPC H +H +C+ KWLK ++ CPLC+ N+ G
Sbjct: 476 DAEQCYICLADYEEGDQIRVLPCFHEYHMSCVDKWLKEIHGVCPLCRGNVCGG 528
>gi|326929821|ref|XP_003211054.1| PREDICTED: zinc/RING finger protein 3-like [Meleagris gallopavo]
Length = 834
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL---KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHKKCVDPWLLQHHTCPHCRHNIIEQKKGN 244
>gi|224139174|ref|XP_002326786.1| predicted protein [Populus trichocarpa]
gi|222834108|gb|EEE72585.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL YE+G + LPC+H FH TC+ KWLK ++ CPLC+ +I + +
Sbjct: 57 ETAQCYICLVEYEEGDSMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDICRSD 110
>gi|47222931|emb|CAF99087.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 633 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 678
>gi|348533399|ref|XP_003454193.1| PREDICTED: zinc/RING finger protein 3-like [Oreochromis niloticus]
Length = 895
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL---KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 269 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNIIEQKKGN 320
>gi|149052427|gb|EDM04244.1| goliath, isoform CRA_a [Rattus norvegicus]
Length = 276
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
P+ C +C+ SY+ + LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 116 PDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 168
>gi|410909057|ref|XP_003968007.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Takifugu
rubripes]
Length = 519
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y G +L LPC+H FH CI +WL N TCP+C+ IL
Sbjct: 469 CSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 514
>gi|357148802|ref|XP_003574899.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 302
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI-LKGNEQV 359
+C IC +E+G L ALPC H +HS CI +WL++N CP+C + GN Q
Sbjct: 249 QCVICRVEFEEGESLVALPCKHSYHSECINQWLQLNKVCPMCSAEVSTPGNSQA 302
>gi|302755386|ref|XP_002961117.1| hypothetical protein SELMODRAFT_270206 [Selaginella moellendorffii]
gi|300172056|gb|EFJ38656.1| hypothetical protein SELMODRAFT_270206 [Selaginella moellendorffii]
Length = 259
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 252 GQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCIC 311
G SEA+++ LP ++++ Q + + + N G ++ E+ C +C
Sbjct: 155 GVPALSEAEINSLPVHKYKPQKSQQGSSQQHQPQASSDPNKGSPSSSLDEKLEELTCSVC 214
Query: 312 LSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
L +G + LPC H FH CI +WL+ ATCP+CK+ + N
Sbjct: 215 LEQVMEGEIVRTLPCLHQFHPHCIDQWLRQQATCPVCKFKMSTTN 259
>gi|118350028|ref|XP_001008295.1| Zinc finger, C3HC4 type [Tetrahymena thermophila]
gi|89290062|gb|EAR88050.1| Zinc finger, C3HC4 type [Tetrahymena thermophila SB210]
Length = 385
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 301 LLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
L +D C ICL YE +L LPC+H +H+ CI KWL + CPLC+ N+
Sbjct: 330 LQEQDIICSICLEKYESDKKLIKLPCSHTYHNYCITKWLLQDQKCPLCRLNL 381
>gi|363739989|ref|XP_415210.3| PREDICTED: zinc/RING finger protein 3 [Gallus gallus]
Length = 834
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL---KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHKKCVDPWLLQHHTCPHCRHNIIEQKKGN 244
>gi|346464887|gb|AEO32288.1| hypothetical protein [Amblyomma maculatum]
Length = 341
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+C +C+ ++ G ++ LPC HHFH CIV WL+++ TCP+C+
Sbjct: 218 QCTVCVEEFKTGEQVKRLPCQHHFHPDCIVPWLELHGTCPICR 260
>gi|58268094|ref|XP_571203.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227437|gb|AAW43896.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 534
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
+C +C +E G E+ +PC H +H C+V WL+ N TCP+C+++++ +EQ
Sbjct: 300 DCPVCKDDFEIGNEVMLIPCGHIYHPDCLVPWLRQNGTCPVCRFSLVSEDEQ 351
>gi|410988439|ref|XP_004000492.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Felis catus]
Length = 631
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC++ Y +G +L LPC H FH CI +WL N+TCP+C+ +
Sbjct: 577 CTICITEYTEGNKLRILPCTHEFHVHCIDRWLSENSTCPICRREV 621
>gi|149053786|gb|EDM05603.1| ring finger protein 43 (predicted) [Rattus norvegicus]
Length = 772
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 262 CAICLEEFTEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 310
>gi|351696172|gb|EHA99090.1| Zinc/RING finger protein 3 [Heterocephalus glaber]
Length = 865
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI++
Sbjct: 222 CAICLEKYTDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 268
>gi|149052428|gb|EDM04245.1| goliath, isoform CRA_b [Rattus norvegicus]
Length = 241
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
P+ C +C+ SY+ + LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 116 PDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 168
>gi|395816981|ref|XP_003781957.1| PREDICTED: RING finger protein 44 isoform 1 [Otolemur garnettii]
Length = 432
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPC+H FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCSHEFHTKCVDKWLKANRTCPICR 421
>gi|348512116|ref|XP_003443589.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oreochromis
niloticus]
Length = 772
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y G +L LPC+H FH CI +WL N TCP+C+ IL
Sbjct: 722 CSVCINEYVQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPIL 767
>gi|134112145|ref|XP_775261.1| hypothetical protein CNBE3220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257916|gb|EAL20614.1| hypothetical protein CNBE3220 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 535
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
+C +C +E G E+ +PC H +H C+V WL+ N TCP+C+++++ +EQ
Sbjct: 301 DCPVCKDDFEIGNEVMLIPCGHIYHPDCLVPWLRQNGTCPVCRFSLVSEDEQ 352
>gi|47223363|emb|CAG04224.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y G +L LPC+H FH CI +WL N TCP+C+ IL
Sbjct: 298 CSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 343
>gi|449269694|gb|EMC80445.1| RING finger protein 6 [Columba livia]
Length = 677
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C++ Y G +L LPC H FH CI +WL N+TCP+C+ +L N
Sbjct: 624 CSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVLGSN 672
>gi|221055521|ref|XP_002258899.1| Zinc-finger protein [Plasmodium knowlesi strain H]
gi|193808969|emb|CAQ39672.1| Zinc-finger protein, putative [Plasmodium knowlesi strain H]
Length = 1201
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC +Y+ L LPC H+FH CI++W+ +TCP+CK NI
Sbjct: 1154 CSICYENYQHNESLIFLPCTHNFHKACIIEWINKKSTCPICKINI 1198
>gi|156094249|ref|XP_001613162.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802036|gb|EDL43435.1| hypothetical protein PVX_119830 [Plasmodium vivax]
Length = 1078
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC +Y+ L LPC H+FH CI++W+ +TCP+CK NI
Sbjct: 1031 CSICYENYQHNESLIFLPCTHNFHKACIIEWINKKSTCPICKINI 1075
>gi|357462645|ref|XP_003601604.1| RING finger protein [Medicago truncatula]
gi|355490652|gb|AES71855.1| RING finger protein [Medicago truncatula]
Length = 352
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ + E+ +C +CL +E G+E +PC H FHS CI+ WL+++++CP+C+ +
Sbjct: 225 VKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQL 277
>gi|291405711|ref|XP_002719311.1| PREDICTED: ring finger protein 43 [Oryctolagus cuniculus]
Length = 777
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 320
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G S+A + LP YR+ N+ + + C +
Sbjct: 940 AKPRGMSKAKIEDLPSYRYNPDNHQSQQTL---------------------------CVV 972
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E+ L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 973 CMCDFENRQLLRVLPCNHEFHAKCVDKWLKSNRTCPICR 1011
>gi|224032039|gb|ACN35095.1| unknown [Zea mays]
gi|413956191|gb|AFW88840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 207
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 257 SEADLSILPKYRFEVQ---------NNDE--KLGVGAGKMVPIETNGGYVANERILLPED 305
SE +++ LP ++++VQ +DE +L V + + G A+ P+D
Sbjct: 82 SEEEINSLPVFKYKVQAQQGNAPARKSDEASQLSVSSTGSGNEKKQDGLKADGTGKTPQD 141
Query: 306 A-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C +CL G L +LPC H FH CI WL+ TCP+CK+ + G
Sbjct: 142 ELTCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSDG 192
>gi|224083444|ref|XP_002307029.1| predicted protein [Populus trichocarpa]
gi|222856478|gb|EEE94025.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 276 EKLGVGAGKMVPIETNGGYVANERILLPEDA---ECCICLSSYEDGTELHALPCNHHFHS 332
E + + AG+ +P T A ER++ + +C +C+ E G+E +PC+H +HS
Sbjct: 147 ESMDIEAGQ-IPA-TKSSIDALERVVFDGSSSTRDCTVCMEEIEAGSEATRMPCSHVYHS 204
Query: 333 TCIVKWLKMNATCPLCKYNILKGNE 357
CIV+WL+ + CPLC+Y+ + GNE
Sbjct: 205 DCIVQWLQTSHLCPLCRYH-MPGNE 228
>gi|224073116|ref|XP_002303979.1| predicted protein [Populus trichocarpa]
gi|222841411|gb|EEE78958.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 300 ILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ + E +C +CL +E G E +PC H FHS CI+ WL+++++CP+C++ +
Sbjct: 231 VTVKEPLQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQL 283
>gi|452824288|gb|EME31292.1| transducin family protein / WD-40 repeat family protein [Galdieria
sulphuraria]
Length = 667
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 241 PCIIAILYAVAGQEGASEADLSILPK-YRFEVQNNDEK-----LGVGAGKMVPIETNGGY 294
P +I + +EG + D+ L K Y FE N ++ L K V TN G+
Sbjct: 500 PPLITYFISSTEKEGLFQKDIDQLCKEYIFEGVENIQRTEVTGLQSSEEKTVDGNTNEGF 559
Query: 295 VANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
N ++ L CCICL E G+ + LPCNH FHS I +WL A CP C+
Sbjct: 560 --NMKVAL-----CCICLEELELGSLVRTLPCNHTFHSKEICRWLCKRAICPYCR 607
>gi|395816983|ref|XP_003781958.1| PREDICTED: RING finger protein 44 isoform 2 [Otolemur garnettii]
Length = 351
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 301
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPC+H FH+ C+ KWLK N TCP+C+
Sbjct: 302 CFSDFEARQLLRVLPCSHEFHTKCVDKWLKANRTCPICR 340
>gi|260783467|ref|XP_002586796.1| hypothetical protein BRAFLDRAFT_102948 [Branchiostoma floridae]
gi|229271922|gb|EEN42807.1| hypothetical protein BRAFLDRAFT_102948 [Branchiostoma floridae]
Length = 518
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C +C++ Y +G+ L LPC H FH+ C+ +WL +NA+CP+C++ +
Sbjct: 470 CNVCITDYIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 514
>gi|414877592|tpg|DAA54723.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 162
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 281 GAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWL 339
GAGK P GG ++ A C +CL+ Y DG EL LP C H FH C+ +WL
Sbjct: 74 GAGKPQPAAAAGGSGSDA-------ARCAVCLADYADGDELRRLPGCRHAFHRGCVDQWL 126
Query: 340 KMNATCPLCK 349
+ TCP+C+
Sbjct: 127 RRRPTCPVCR 136
>gi|226505256|ref|NP_001142551.1| uncharacterized LOC100274803 [Zea mays]
gi|195606334|gb|ACG24997.1| hypothetical protein [Zea mays]
gi|413916096|gb|AFW56028.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 279
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
Y A + + ++C ICL+ YE+G EL LP C+H FH+ CI WL N+TCP+C+ ++
Sbjct: 90 YAAAQASDSDDGSQCVICLAEYEEGDELRVLPPCSHTFHTGCISLWLAQNSTCPVCRVSL 149
Query: 353 L 353
L
Sbjct: 150 L 150
>gi|15231003|ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis
thaliana]
gi|75301658|sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName:
Full=RING finger protein 1
gi|20465263|gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana]
gi|23308365|gb|AAN18152.1| At3g19950/MPN9_19 [Arabidopsis thaliana]
gi|332642790|gb|AEE76311.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis
thaliana]
Length = 328
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ + G I+ + +L E +C +C+ +EDG+++ +PC H F
Sbjct: 179 AENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVF 238
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
H C++ WL+++ +CP+C++ +
Sbjct: 239 HQDCLLPWLELHNSCPVCRFEL 260
>gi|405950010|gb|EKC18019.1| hypothetical protein CGI_10016779 [Crassostrea gigas]
Length = 671
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
+A C ICL + +L LPC+H FH+ C+ WL N TCPLCK NI+ G
Sbjct: 364 NALCAICLELFNRKQKLRVLPCSHEFHTKCVDPWLLNNRTCPLCKLNIVVG 414
>gi|213512162|ref|NP_001135282.1| ring finger protein 13 [Salmo salar]
gi|209155986|gb|ACI34225.1| RING finger protein 13 [Salmo salar]
Length = 380
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNIL 353
C ICL YEDG +L LPC+H +HS C+ WL K TCP+CK ++
Sbjct: 240 CAICLDEYEDGDQLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVV 286
>gi|397576210|gb|EJK50125.1| hypothetical protein THAOC_30936 [Thalassiosira oceanica]
Length = 389
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C +C YE+G EL ALPC H+FH+ CI +WL TC LC+ +I++
Sbjct: 336 CQVCQFKYEEGDELRALPCGHYFHAACIDEWLTNKDTCALCRKSIVE 382
>gi|237832047|ref|XP_002365321.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
gi|211962985|gb|EEA98180.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
Length = 1290
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+CCIC+ Y L LPC H FH++C+ +W++ +TCPLC++ + +
Sbjct: 1237 DCCICMGEYAVSESLRRLPCMHAFHTSCLRRWIQEKSTCPLCRFELTR 1284
>gi|195606966|gb|ACG25313.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 512
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
+C ICL+ YEDG ++ LPC H FH C+ KWLK ++ CPLC+ ++
Sbjct: 465 QCHICLNEYEDGDQIRTLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 511
>gi|357487057|ref|XP_003613816.1| RING finger protein [Medicago truncatula]
gi|355515151|gb|AES96774.1| RING finger protein [Medicago truncatula]
Length = 222
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 277 KLGVGAGKMVPIETNGGYVANERILLPED--AECCICLSSYEDGTELHALPCNHHFHSTC 334
LG P T A ++I + E EC +CL +E G + +PC H FH C
Sbjct: 82 NLGSSTKNGQPPATKESIEAMDKIEIEEGDGGECVVCLEEFEVGGVVKEMPCKHRFHGKC 141
Query: 335 IVKWLKMNATCPLCKYNI 352
I KWL ++ +CP+C+Y +
Sbjct: 142 IEKWLGIHGSCPVCRYQM 159
>gi|326914309|ref|XP_003203468.1| PREDICTED: e3 ubiquitin-protein ligase RNF6-like [Meleagris
gallopavo]
Length = 744
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C++ Y G +L LPC H FH CI +WL N+TCP+C+ +L N
Sbjct: 691 CSVCINEYVAGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVLGSN 739
>gi|432930094|ref|XP_004081317.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oryzias latipes]
Length = 724
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y G +L LPC+H FH CI +WL N TCP+C+ IL
Sbjct: 674 CSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 719
>gi|297260803|ref|XP_001103574.2| PREDICTED: zinc/RING finger protein 3-like [Macaca mulatta]
Length = 797
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGNEQ 358
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ +G +Q
Sbjct: 162 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIVSRGRQQ 214
>gi|118084993|ref|XP_417129.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Gallus gallus]
Length = 672
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C++ Y G +L LPC H FH CI +WL N+TCP+C+ +L N
Sbjct: 619 CSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVLGSN 667
>gi|317419922|emb|CBN81958.1| RING finger protein 6, partial [Dicentrarchus labrax]
Length = 283
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y G +L LPC+H FH CI +WL N TCP+C+ IL
Sbjct: 233 CSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 278
>gi|28573149|ref|NP_731367.2| murashka, isoform C [Drosophila melanogaster]
gi|28381204|gb|AAF54394.4| murashka, isoform C [Drosophila melanogaster]
gi|317008637|gb|ADU79246.1| GH10160p [Drosophila melanogaster]
Length = 1173
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 31/103 (30%)
Query: 251 AGQEGASEADLSILPKYRF--EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAEC 308
A G + ++ LP Y+F EV N D+ + C
Sbjct: 1047 AKPRGLTRNEIDQLPSYKFNPEVHNGDQ-----------------------------SSC 1077
Query: 309 CICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
+C+ +E L LPC+H FH+ C+ KWL+ N TCP+C+ N
Sbjct: 1078 VVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGN 1120
>gi|302766948|ref|XP_002966894.1| hypothetical protein SELMODRAFT_168691 [Selaginella moellendorffii]
gi|300164885|gb|EFJ31493.1| hypothetical protein SELMODRAFT_168691 [Selaginella moellendorffii]
Length = 259
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 252 GQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCIC 311
G SEA+++ LP ++++ Q + + + N G ++ E+ C +C
Sbjct: 155 GVPALSEAEINSLPVHKYKPQKSQQGSSQQHQPQASSDPNKGSPSSSLGEKLEELTCSVC 214
Query: 312 LSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
L +G + LPC H FH CI +WL+ ATCP+CK+ + N
Sbjct: 215 LEQVMEGEIVRTLPCLHQFHPHCIDQWLRQQATCPVCKFKMSTTN 259
>gi|300708549|ref|XP_002996451.1| hypothetical protein NCER_100447 [Nosema ceranae BRL01]
gi|239605755|gb|EEQ82780.1| hypothetical protein NCER_100447 [Nosema ceranae BRL01]
Length = 246
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
E C IC YE G E+ LPC HHFH C+ +WL + +CPLCK
Sbjct: 184 ETVTCTICFEQYEPGNEIKFLPCTHHFHCDCVDEWLALKESCPLCK 229
>gi|440801267|gb|ELR22287.1| zinc finger (C3HC4type RING finger) family protein [Acanthamoeba
castellanii str. Neff]
Length = 95
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C ICL YEDG L LPC H +H CI +WL N CP+CK+++
Sbjct: 43 CTICLVEYEDGELLKTLPCLHSYHQECIDEWLSGNKLCPICKFDV 87
>gi|357602283|gb|EHJ63333.1| putative goliath E3 ubiquitin ligase [Danaus plexippus]
Length = 408
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
D ECC IC+ Y+ L +LPC H FH +CI WL + TCP+CK +ILK
Sbjct: 271 DGECCAICIEPYKVSETLRSLPCRHDFHKSCIDPWLLEHRTCPMCKMDILK 321
>gi|302423486|ref|XP_003009573.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261352719|gb|EEY15147.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 693
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 297 NERILLPED-AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
++ +L PE AEC IC+ + G E+ LPC H FH TC+V WLK + TCP+C+ I +
Sbjct: 524 DDDMLGPEGTAECTICIDELKKGEEVVYLPCKHWFHDTCVVMWLKEHNTCPICRTPIEER 583
Query: 356 NE 357
E
Sbjct: 584 TE 585
>gi|432961284|ref|XP_004086590.1| PREDICTED: E3 ubiquitin-protein ligase RNF130-like [Oryzias
latipes]
Length = 341
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 264 LPKYRFEVQNN--DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTEL 321
+ K RF + +LG A K + T ++ P+ C +C+ +Y+ +
Sbjct: 137 IQKIRFSSARDRSQRRLGDAAKKAIGKLTTRTVKKGDKETDPDFNHCAVCIEAYQLNDVV 196
Query: 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH C+ WL + TCP+CK NILK
Sbjct: 197 RILPCKHVFHKVCVDPWLNEHCTCPMCKLNILKA 230
>gi|213982763|ref|NP_001135553.1| ring finger protein 150 precursor [Xenopus (Silurana) tropicalis]
gi|195540169|gb|AAI68034.1| Unknown (protein for MGC:185271) [Xenopus (Silurana) tropicalis]
Length = 427
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N +LG A K + ++ PE C +C+ Y+ +
Sbjct: 224 RFRYANARDRNQRRLGDAAKKAISKLQVRTIKKGDKETEPEFDNCAVCIEGYKPNDVVRI 283
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 284 LPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 315
>gi|92081550|dbj|BAE93322.1| zinc finger protein [Ciona intestinalis]
Length = 693
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C ICL + + EL +PC+H FH C+ WLK TCPLC +NIL
Sbjct: 254 CAICLEVFNENEELRVIPCSHEFHKHCVDPWLKEKLTCPLCNFNIL 299
>gi|449442999|ref|XP_004139268.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449493673|ref|XP_004159405.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 201
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 272 QNNDEKLGVGAGKMVPIETNGGYVANERIL---LPEDAECCICLSSYEDGTELHALPCNH 328
+NN EK + K ET + +++ E EC +CL + L LPC H
Sbjct: 113 KNNGEKKEMKNTKGKEEETKKRFSWGRKLMKWKASEQEECSVCLERFRLSEPLLHLPCAH 172
Query: 329 HFHSTCIVKWLKMNATCPLCKYNI 352
FHSTC+V WL+ NA CP C++ I
Sbjct: 173 KFHSTCLVPWLQANAHCPCCRFPI 196
>gi|297830662|ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329053|gb|EFH59472.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ + G I+ + +L E +C +C+ +EDG+++ +PC H F
Sbjct: 181 AENDPNRYGTPPASKSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVF 240
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
H C++ WL+++ +CP+C++ +
Sbjct: 241 HQDCLLPWLQLHNSCPVCRFEL 262
>gi|74096373|ref|NP_001027655.1| zinc finger (RING)-10 precursor [Ciona intestinalis]
gi|24636593|dbj|BAC22752.1| CiGl [Ciona intestinalis]
Length = 693
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C ICL + + EL +PC+H FH C+ WLK TCPLC +NIL
Sbjct: 254 CAICLEVFNENEELRVIPCSHEFHKHCVDPWLKEKLTCPLCNFNIL 299
>gi|299116310|emb|CBN76116.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 477
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 276 EKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCI 335
LG G G E N N + +D C ICL +YEDG L LPC H FH+ CI
Sbjct: 348 SSLGNGTGSAA-SEDNSSSNDNGFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCI 406
Query: 336 VKWLK-MNATCPLCK 349
WL +A CP+CK
Sbjct: 407 RPWLSGKSALCPMCK 421
>gi|297597455|ref|NP_001043999.2| Os01g0703300 [Oryza sativa Japonica Group]
gi|255673600|dbj|BAF05913.2| Os01g0703300, partial [Oryza sativa Japonica Group]
Length = 64
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
ECCICL+ Y++ E+ LPC H FH C+ +WL++ ++CPLCK
Sbjct: 18 ECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCK 60
>gi|444720811|gb|ELW61580.1| RING finger protein 43 [Tupaia chinensis]
Length = 831
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 320 CAICLEEFSEGQELRIISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGD 368
>gi|221506522|gb|EEE32139.1| RING finger protein 6/12/38, putative [Toxoplasma gondii VEG]
Length = 1213
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+CCIC+ Y L LPC H FH++C+ +W++ +TCPLC++ + +
Sbjct: 1160 DCCICMGEYAVSESLRRLPCMHAFHTSCLRRWIQEKSTCPLCRFELTR 1207
>gi|213512997|ref|NP_001133644.1| E3 ubiquitin-protein ligase RNF128 precursor [Salmo salar]
gi|209154790|gb|ACI33627.1| E3 ubiquitin-protein ligase RNF128 precursor [Salmo salar]
Length = 407
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK--GNEQ 358
P+ C +C+ +Y+ G L L CNH FH TCI WL + TCP+CK +ILK G EQ
Sbjct: 252 PDADTCAVCIDAYKSGDVLTILTCNHFFHKTCIEPWLLEHRTCPMCKCDILKALGVEQ 309
>gi|395845833|ref|XP_003795624.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 [Otolemur garnettii]
Length = 782
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGD 320
>gi|118352226|ref|XP_001009386.1| RING finger protein [Tetrahymena thermophila]
gi|89291153|gb|EAR89141.1| RING finger protein [Tetrahymena thermophila SB210]
Length = 1202
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL+ +++G ++ L C H FH +C+ WLK+ +CPLC+ N+++ N
Sbjct: 1137 CAICLNDFDEGEKVKELNCEHRFHISCVDDWLKIKGSCPLCRQNLVQVN 1185
>gi|74007249|ref|XP_855008.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Canis lupus
familiaris]
Length = 625
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C IC++ Y +G L LPC+H FH CI WL N+TCP+C+ ++ E+
Sbjct: 571 CSICITEYTEGNRLRILPCSHEFHVHCIDHWLSENSTCPICRGQVVGSGEK 621
>gi|15223679|ref|NP_172872.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|5080796|gb|AAD39306.1|AC007576_29 Unknown protein [Arabidopsis thaliana]
gi|28416613|gb|AAO42837.1| At1g14200 [Arabidopsis thaliana]
gi|110743241|dbj|BAE99511.1| hypothetical protein [Arabidopsis thaliana]
gi|332191000|gb|AEE29121.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 179
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 299 RILLPEDAE-----CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
R+++ ED E C ICL + G +PC H FHS C+ +WL +ATCP+C+Y +
Sbjct: 95 RVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEM 153
>gi|427797619|gb|JAA64261.1| Putative ring finger protein, partial [Rhipicephalus pulchellus]
Length = 401
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+C +C+ ++ G ++ LPC HHFH CIV WL+++ TCP+C+
Sbjct: 247 QCTVCMEEFKTGEQVKRLPCQHHFHPDCIVPWLELHGTCPICR 289
>gi|157129771|ref|XP_001661757.1| hypothetical protein AaeL_AAEL011580 [Aedes aegypti]
gi|108872095|gb|EAT36320.1| AAEL011580-PA [Aedes aegypti]
Length = 147
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 298 ERILLPEDAECCICLSSYEDGTELH-ALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
E+++ +D C IC+ ED E+ LPC H FH +CI+ WL+ +CPLC++ +L +
Sbjct: 59 EKVVTKDDERCTICIKPNEDENEMFLVLPCKHDFHKSCIMPWLEKTNSCPLCRHELLTDD 118
Query: 357 E 357
E
Sbjct: 119 E 119
>gi|17978924|gb|AAL47429.1| AT5g45290/K9E15_7 [Arabidopsis thaliana]
Length = 545
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
++C ICL YE+ + ALPC+H FH TC+ KWLK ++ CPLC+ +I + +
Sbjct: 488 SQCYICLVEYEEADSIRALPCHHEFHKTCVDKWLKEIHRVCPLCRGDICRHD 539
>gi|449435338|ref|XP_004135452.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 207
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 287 PIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCP 346
P + A + + E EC ICL E G +PCNH FH CI KWL+++ +CP
Sbjct: 78 PPASKASIKAMPSLPVSEVTECVICLDEIEVGRLAKQMPCNHKFHGDCIQKWLELHGSCP 137
Query: 347 LCKYNI-LKGNEQ 358
+C+Y + + G+++
Sbjct: 138 VCRYQMPIDGDDE 150
>gi|145532471|ref|XP_001451991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419668|emb|CAK84594.1| unnamed protein product [Paramecium tetraurelia]
Length = 240
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 211 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFE 270
+ F +F ++ + ++ + + CLP II ++ + K++ +
Sbjct: 106 VITFQIVFLFLTMYQYLEVYMVSLLIVICLPFIIPVM---------------LWHKFKQK 150
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN--H 328
+N D + + K +T +E+I D EC IC+ Y EL LPC+ H
Sbjct: 151 KKNYDNQQSLNELK----KTCKTLYHSEKI--QGDQECGICMHVYVTDEELLILPCDPKH 204
Query: 329 HFHSTCIVKWLKMNATCPLCKYNILKGN 356
HFH CI WL +N+TCP C+ + L+ N
Sbjct: 205 HFHLHCIQAWLLINSTCPKCRASFLRFN 232
>gi|223975445|gb|ACN31910.1| unknown [Zea mays]
Length = 335
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C +CL +E G E +PC H FHS CI+ WL+++++CP+C++ +
Sbjct: 217 CSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICRFQL 261
>gi|449478392|ref|XP_004155306.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 196
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 287 PIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCP 346
P + A + + E EC ICL E G +PCNH FH CI KWL+++ +CP
Sbjct: 78 PPASKASIKAMPSLPVSEVTECVICLDEIEVGRLAKQMPCNHKFHGDCIQKWLELHGSCP 137
Query: 347 LCKYNI-LKGNEQ 358
+C+Y + + G+++
Sbjct: 138 VCRYQMPIDGDDE 150
>gi|322705515|gb|EFY97100.1| RING-9 protein [Metarhizium anisopliae ARSEF 23]
Length = 807
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 292 GGYVANERILLPEDAECCICLSSYEDG-TELHALPCNHHFHSTCIVKWLKM-NATCPLCK 349
GG+ A R + EC +CL Y DG + + +LPC H FH+ CI WL TCP+CK
Sbjct: 651 GGFSAEWRKYMGRQVECVVCLEEYVDGVSRVMSLPCGHEFHADCITPWLTTRRRTCPICK 710
Query: 350 YNILK 354
++++
Sbjct: 711 GDVVR 715
>gi|298705326|emb|CBJ49016.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1372
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
A+C ICL +E+G L LPC H FH C+ +WL ++ +CPLCK + +G
Sbjct: 1178 ADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREG 1227
>gi|225426249|ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
gi|297742383|emb|CBI34532.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 305 DAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
D+ CC+CL +E ELH +P C H FH+ CI WL+ N+TCPLC+ ++ +
Sbjct: 100 DSLCCVCLGEFEIKEELHQVPSCKHVFHADCIYHWLRTNSTCPLCRCSVFPNTK 153
>gi|77552949|gb|ABA95745.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
gi|125579823|gb|EAZ20969.1| hypothetical protein OsJ_36622 [Oryza sativa Japonica Group]
Length = 189
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
EC +CL +E+ L +PCNH FH C+ +WL + CPLC+Y + K +
Sbjct: 135 ECAVCLRDFEEKDMLRTMPCNHSFHEICLFRWLSESCLCPLCRYALPKQQQ 185
>gi|357481397|ref|XP_003610984.1| RING finger protein [Medicago truncatula]
gi|355512319|gb|AES93942.1| RING finger protein [Medicago truncatula]
Length = 396
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 305 DAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
D C ICL Y+ L ++P CNHHFH+ CI WLKMNATCPLC+
Sbjct: 347 DNVCSICLGEYKPMETLRSIPQCNHHFHADCIDVWLKMNATCPLCR 392
>gi|356497902|ref|XP_003517795.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 229
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ED EC +CL + G +PC H FH CI KWL M+ +CP+C+Y +
Sbjct: 113 EDLECVVCLEEFGVGGVAKEMPCKHRFHVNCIEKWLGMHGSCPVCRYEM 161
>gi|326680221|ref|XP_001923015.2| PREDICTED: hypothetical protein LOC561841 [Danio rerio]
Length = 474
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C IC S Y+ G L LPC H +H CI +WLK NATCP+C+ ++
Sbjct: 421 TDCQICFSEYKAGERLRMLPCLHDYHVKCIDRWLKENATCPICRADV 467
>gi|334188355|ref|NP_200123.2| RING/U-box domain-containing protein-like protein [Arabidopsis
thaliana]
gi|332008921|gb|AED96304.1| RING/U-box domain-containing protein-like protein [Arabidopsis
thaliana]
Length = 382
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 288 IETNGGYVANERILLP--EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNAT 344
IE+ V E LP +DA C ICLS YE L +P C H FH+ CI +WLK+N T
Sbjct: 308 IESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGT 367
Query: 345 CPLCK 349
CP+C+
Sbjct: 368 CPVCR 372
>gi|326667695|ref|XP_684807.5| PREDICTED: zinc/RING finger protein 3 [Danio rerio]
gi|395455178|sp|A5WWA0.2|ZNRF3_DANRE RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
Length = 868
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL---KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNIIDQKKGN 318
>gi|47221513|emb|CAG08175.1| unnamed protein product [Tetraodon nigroviridis]
Length = 750
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+
Sbjct: 168 CAICLEKYMDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNII 213
>gi|297832042|ref|XP_002883903.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329743|gb|EFH60162.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 195
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 261 LSILPKYRFEVQNNDEKLGVGAGK---MVPIETNGGYVANERIL------LPEDAECCIC 311
L I + R ++ KL G GK +P E G + R++ + E +C IC
Sbjct: 93 LRIPRRTRQNGKDKGNKLEQGKGKPPGALPTEVVGLKKSRGRLIEWFKWRVREQQDCAIC 152
Query: 312 LSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
L ++ G L LPC H FHS C++ WL N CP C+ +I
Sbjct: 153 LDQFKKGETLVHLPCAHKFHSLCLLPWLDTNVYCPYCRTDI 193
>gi|212724133|ref|NP_001131833.1| uncharacterized protein LOC100193208 [Zea mays]
gi|194688576|gb|ACF78372.1| unknown [Zea mays]
gi|195627610|gb|ACG35635.1| protein binding protein [Zea mays]
gi|414866067|tpg|DAA44624.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 257 SEADLSILPKYRFEVQ-----------NNDEKLGVGAGKMVPIETNGGYVANERILLPED 305
SE +++ LP ++++VQ + +L V + E G A+ ED
Sbjct: 155 SEEEINSLPVFKYKVQAQQRHPPARKSDGPSQLSVSSTGSGNEEKQDGLKADGTSKPSED 214
Query: 306 A-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C +CL G L +LPC H FH CI WL+ TCP+CK+ + G
Sbjct: 215 ELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSDG 265
>gi|432878338|ref|XP_004073308.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 642
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 27/95 (28%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G ++ D+ LP YRF N+ E C +C+S
Sbjct: 564 GLTKGDIEQLPSYRFNPNNHQS---------------------------EQTLCVVCMSD 596
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+E L LPC+H FH C+ KWL+ N TCP+C+
Sbjct: 597 FESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICR 631
>gi|413924199|gb|AFW64131.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 513
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
+C ICL+ YEDG ++ LPC H FH C+ KWLK ++ CPLC+ ++
Sbjct: 462 QCHICLTEYEDGDQIRILPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 508
>gi|170571824|ref|XP_001891879.1| hypotetical protein, conserved [Brugia malayi]
gi|158603363|gb|EDP39313.1| hypothetical protein, conserved [Brugia malayi]
Length = 510
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
R Q N +L + IE + ++ LL E C IC +E + LPC
Sbjct: 354 RMAPQMNATRLPPKGMTKIEIEQLKSFRISDPALLMEKV-CVICQCDFEKRDMVRMLPCA 412
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
HHFH CI KWL+ N TCP+C+ N+ ++
Sbjct: 413 HHFHLKCIDKWLRGNRTCPICRQNVASDDD 442
>gi|196000961|ref|XP_002110348.1| hypothetical protein TRIADDRAFT_54253 [Trichoplax adhaerens]
gi|190586299|gb|EDV26352.1| hypothetical protein TRIADDRAFT_54253 [Trichoplax adhaerens]
Length = 283
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 301 LLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
+L ++EC IC ++ LPC H+FHS CIV+WL+ + TCP+C+ N+ +G+
Sbjct: 186 ILETNSECPICKEEFKVKDTARKLPCQHYFHSQCIVQWLQRHGTCPVCRLNLAEGS 241
>gi|222631461|gb|EEE63593.1| hypothetical protein OsJ_18410 [Oryza sativa Japonica Group]
Length = 521
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL Y +G + LPCNH FH TC+ KWLK ++ CPLC+ ++ + N
Sbjct: 460 EAAQCYICLVEYAEGDCVRILPCNHEFHLTCVDKWLKEIHRVCPLCRGDVCRSN 513
>gi|125552196|gb|EAY97905.1| hypothetical protein OsI_19822 [Oryza sativa Indica Group]
Length = 521
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL Y +G + LPCNH FH TC+ KWLK ++ CPLC+ ++ + N
Sbjct: 460 EAAQCYICLVEYAEGDCVRILPCNHEFHLTCVDKWLKEIHRVCPLCRGDVCRSN 513
>gi|357142594|ref|XP_003572625.1| PREDICTED: E3 ubiquitin-protein ligase EL5-like [Brachypodium
distachyon]
Length = 318
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
EC +CL+ EDG E LP C H FH+ C+ WL ++TCPLC+ + K V
Sbjct: 121 ECAVCLAELEDGQEARFLPRCGHGFHAACVDTWLAAHSTCPLCRVTVAKAEADV 174
>gi|167830481|ref|NP_766036.2| E3 ubiquitin-protein ligase RNF43 precursor [Mus musculus]
gi|81889246|sp|Q5NCP0.1|RNF43_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF43; AltName: Full=RING
finger protein 43; Flags: Precursor
Length = 784
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGD 320
>gi|384253353|gb|EIE26828.1| hypothetical protein COCSUDRAFT_59336 [Coccomyxa subellipsoidea
C-169]
Length = 417
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+C ICL + G LH LPC H FH C+ KWL ATCP+C+
Sbjct: 372 KCPICLEDFSPGAVLHRLPCTHQFHRDCVDKWLTQKATCPICQQ 415
>gi|322701312|gb|EFY93062.1| C3HC4 type (RING finger) zinc finger containing protein
[Metarhizium acridum CQMa 102]
Length = 807
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 292 GGYVANERILLPEDAECCICLSSYEDG-TELHALPCNHHFHSTCIVKWLKM-NATCPLCK 349
GG+ A R + EC +CL Y DG + + +LPC H FH+ CI WL TCP+CK
Sbjct: 652 GGFSAEWRKYMGRQVECVVCLEEYVDGVSRVMSLPCGHEFHADCITPWLTTRRRTCPICK 711
Query: 350 YNILK 354
++++
Sbjct: 712 GDVVR 716
>gi|194688820|gb|ACF78494.1| unknown [Zea mays]
gi|194702962|gb|ACF85565.1| unknown [Zea mays]
gi|219885367|gb|ACL53058.1| unknown [Zea mays]
gi|413949492|gb|AFW82141.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 528
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL YE+G L LPC+H FH TC+ KWLK ++ CPLC+ ++ + +
Sbjct: 468 EAAQCYICLVEYEEGDCLRILPCHHEFHLTCVDKWLKEIHRVCPLCRGDVCRSD 521
>gi|167525429|ref|XP_001747049.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774344|gb|EDQ87973.1| predicted protein [Monosiga brevicollis MX1]
Length = 481
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 296 ANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
A+E + C +CL E G + LPC H FH CI WL+ + TCPLCK+N+++
Sbjct: 279 ADESHREADGTACAVCLDDLEPGVMIRQLPCQHLFHKDCIDPWLEAHYTCPLCKFNVVR 337
>gi|296084573|emb|CBI25594.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKG 355
A+C ICL+ YE+G ++ LPC+H +H +C+ KWLK ++ CPLC+ ++ +G
Sbjct: 116 AQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREG 166
>gi|354483322|ref|XP_003503843.1| PREDICTED: RING finger protein 43 [Cricetulus griseus]
Length = 785
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGD 320
>gi|308081112|ref|NP_001183423.1| uncharacterized protein LOC100501846 [Zea mays]
gi|238011374|gb|ACR36722.1| unknown [Zea mays]
Length = 505
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNI 352
+C ICL+ YEDG ++ LPC H FH C+ KWLK ++ CPLC+ ++
Sbjct: 454 QCHICLTEYEDGDQIRILPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 500
>gi|428171168|gb|EKX40087.1| hypothetical protein GUITHDRAFT_164771 [Guillardia theta CCMP2712]
Length = 561
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 211 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFE 270
V + DVF + VL C + AIL + Q E+D K + E
Sbjct: 46 GAVESSNDVFTGVPQEVLD-----RDTCRMKYADAILRELEKQNEKQESDA----KDKSE 96
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+ + AG ++P G + E +D C +C YED E+ LPC H F
Sbjct: 97 STDAQKGCPHSAGLIIP----GLQIDTEE----DDRLCEVCQCGYEDDEEVMVLPCQHFF 148
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
HS C+ +WL M TCP C++ +
Sbjct: 149 HSECVGRWLSMKTTCPKCRHEL 170
>gi|47215711|emb|CAG04795.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 27/95 (28%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G ++ D+ LP YRF N+ E C +C+S
Sbjct: 519 GLTKGDIEQLPSYRFNPNNHQS---------------------------EQTLCVVCMSD 551
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+E L LPC+H FH C+ KWL+ N TCP+C+
Sbjct: 552 FESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICR 586
>gi|390355528|ref|XP_003728567.1| PREDICTED: uncharacterized protein LOC585279 isoform 1
[Strongylocentrotus purpuratus]
Length = 514
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 27/109 (24%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G S+A++ LP YR+ + P N D CC+
Sbjct: 430 AKPRGLSKANIDQLPSYRYNPE-------------TPRTIN-------------DQTCCV 463
Query: 311 -CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C+S +E L LPC+H FH+ C+ KWLK N TCP+C+ + + N Q
Sbjct: 464 VCMSDFETRQTLRVLPCSHEFHARCVDKWLKSNRTCPICRADASEINSQ 512
>gi|324508841|gb|ADY43731.1| Zinc/RING finger protein 3 [Ascaris suum]
Length = 600
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C ICL Y++G EL L C H FH C+ WL N CPLC+Y+I+
Sbjct: 318 CSICLDEYKEGQELRVLFCGHEFHPKCVDPWLLSNRRCPLCQYDIV 363
>gi|38454178|gb|AAR20783.1| At3g13430 [Arabidopsis thaliana]
gi|44681454|gb|AAS47667.1| At3g13430 [Arabidopsis thaliana]
Length = 315
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
+C +CL +E G E +PC H FHS C++ WL+++++CP+C+Y + G++
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDD 274
>gi|449450754|ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449527992|ref|XP_004170991.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 378
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D+ C +C ++E GTE +PC H +HS CI+ WL M +CP+C++ +
Sbjct: 182 DSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHEL 229
>gi|349603972|gb|AEP99650.1| E3 ubiquitin-protein ligase RLIM-like protein, partial [Equus
caballus]
Length = 225
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 171 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 222
>gi|242087807|ref|XP_002439736.1| hypothetical protein SORBIDRAFT_09g019240 [Sorghum bicolor]
gi|241945021|gb|EES18166.1| hypothetical protein SORBIDRAFT_09g019240 [Sorghum bicolor]
Length = 535
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL YE+G L LPC+H FH TC+ KWLK ++ CPLC+ ++ + +
Sbjct: 475 EAAQCYICLVEYEEGDCLRILPCHHEFHLTCVDKWLKEIHRVCPLCRGDVCRSD 528
>gi|148683879|gb|EDL15826.1| ring finger protein 43 [Mus musculus]
Length = 774
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 262 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGD 310
>gi|297796027|ref|XP_002865898.1| hypothetical protein ARALYDRAFT_357456 [Arabidopsis lyrata subsp.
lyrata]
gi|297311733|gb|EFH42157.1| hypothetical protein ARALYDRAFT_357456 [Arabidopsis lyrata subsp.
lyrata]
Length = 101
Score = 61.2 bits (147), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
++ + +D++C ICL YE G ++ LPCNH +H CI+ W K N C +CK +
Sbjct: 46 KKKFVADDSQCTICLVDYEKGDKIMTLPCNHIYHKDCILHWFKENRVCCVCKREV 100
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 270 EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL-PCNH 328
E +ND K + A I T +++ L +AEC ICLS +E G + L C+H
Sbjct: 486 ETDDNDHKSDLEADSSFTIPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHH 545
Query: 329 HFHSTCIVKWLKMNATCPLCKYNIL 353
FH CI KWL ++CP C+ +I
Sbjct: 546 GFHVKCIHKWLSSRSSCPTCRTSIF 570
>gi|429848574|gb|ELA24039.1| ring finger domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 500
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 297 NERILLPE-DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+E++L PE AEC IC+ + G + LPC H FH C+V WLK + TCP+C+ I
Sbjct: 304 DEKMLGPEGKAECTICIDDFSLGDDATVLPCKHWFHDQCVVMWLKEHNTCPICRTPI 360
>gi|149723990|ref|XP_001503751.1| PREDICTED: RING finger protein 43 [Equus caballus]
Length = 783
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL+ + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRACVDPWLQQHRTCPLCMFNIVEGD 320
>gi|298711205|emb|CBJ32426.1| ring finger protein [Ectocarpus siliculosus]
Length = 203
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 290 TNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
T GGY E D +C +C YE+ EL LPC+H FH+ C+ WL+ N CP C+
Sbjct: 143 TAGGYSGGE------DTKCLVCQCDYEEDDELRILPCSHTFHTECVDGWLEENEECPTCR 196
Query: 350 YNI 352
++
Sbjct: 197 RSV 199
>gi|255559032|ref|XP_002520539.1| protein binding protein, putative [Ricinus communis]
gi|223540381|gb|EEF41952.1| protein binding protein, putative [Ricinus communis]
Length = 397
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 257 SEADLSILPKYRFEV---QNNDEKLGVGAGKMVPIETNGGYVANERIL--LPEDAECCIC 311
SE +++ LP ++++V +N + P E +E + L ++ C IC
Sbjct: 154 SEEEINALPVHKYKVPRSENACTSQQQASSSSAPTEMTQDSRKSEGTVKALEDELTCSIC 213
Query: 312 LSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
L G + +LPC H FH+ CI WL+ TCP+CK+ I G
Sbjct: 214 LEQVNKGEIVRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRIGSG 257
>gi|359074870|ref|XP_003587226.1| PREDICTED: LOW QUALITY PROTEIN: zinc/RING finger protein 3 [Bos
taurus]
Length = 731
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 238
>gi|303288165|ref|XP_003063371.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455203|gb|EEH52507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 228
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 304 EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
EDA C +C+ +E+G E+ ALP C H FH CI +WL N TCP C+ ++
Sbjct: 45 EDAICSVCIDPFEEGDEVRALPMCEHAFHKECIDEWLSQNTTCPNCRASL 94
>gi|219886093|gb|ACL53421.1| unknown [Zea mays]
Length = 374
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY Q A EA + LPK+R K VP + +
Sbjct: 201 LYLTDAQREAVEALIQELPKFRL--------------KAVPTDC---------------S 231
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 232 ECPICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 278
>gi|15231124|ref|NP_191431.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|7630067|emb|CAB88289.1| putative protein [Arabidopsis thaliana]
gi|332646301|gb|AEE79822.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 238
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
+D C +CL +E + PC H FH CIV WLK CP+C++ ILK +Q
Sbjct: 140 DDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQ 194
>gi|125543691|gb|EAY89830.1| hypothetical protein OsI_11376 [Oryza sativa Indica Group]
Length = 392
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
A C +CL +E G E +PC H FH CI+ WL+ +++CP+C+Y + +E
Sbjct: 282 ATCPVCLDEFEAGGEAREMPCKHRFHDGCILPWLEAHSSCPVCRYQLPTDDE 333
>gi|159163534|pdb|1X4J|A Chain A, Solution Structure Of Ring Finger In Ring Finger Protein
38
Length = 75
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
E C +C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 67
>gi|255573109|ref|XP_002527484.1| conserved hypothetical protein [Ricinus communis]
gi|223533124|gb|EEF34882.1| conserved hypothetical protein [Ricinus communis]
Length = 282
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C ICL S++DG +L LPCNH FHS+C+ W++ CP C+ +I
Sbjct: 230 DCSICLESFKDGDKLICLPCNHRFHSSCLDPWVRTCGDCPYCRRDI 275
>gi|45384742|gb|AAS59414.1| goliath protein, partial [Chinchilla lanigera]
Length = 193
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 108 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 167
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYN 351
C H FH +C+ WL + TCP+CK N
Sbjct: 168 CKHVFHKSCVDPWLSEHCTCPMCKLN 193
>gi|115452763|ref|NP_001049982.1| Os03g0324900 [Oryza sativa Japonica Group]
gi|108707910|gb|ABF95705.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113548453|dbj|BAF11896.1| Os03g0324900 [Oryza sativa Japonica Group]
gi|215686908|dbj|BAG90778.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
A C +CL +E G E +PC H FH CI+ WL+ +++CP+C+Y + +E
Sbjct: 210 ATCPVCLDEFEAGGEAREMPCKHRFHDGCILPWLEAHSSCPVCRYQLPTDDE 261
>gi|15231238|ref|NP_187951.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|79313215|ref|NP_001030687.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334185314|ref|NP_001189879.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|9280292|dbj|BAB01747.1| unnamed protein product [Arabidopsis thaliana]
gi|332641826|gb|AEE75347.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332641827|gb|AEE75348.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332641828|gb|AEE75349.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 315
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
+C +CL +E G E +PC H FHS C++ WL+++++CP+C+Y + G++
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDD 274
>gi|356553773|ref|XP_003545227.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
Length = 221
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 305 DAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
+AECCICL ++ DG +L LP C+H FH C+ KWL ++ CPLC+ ++
Sbjct: 98 EAECCICLGAFADGEKLKVLPGCDHSFHCECVDKWLTNHSNCPLCRASL 146
>gi|341875414|gb|EGT31349.1| hypothetical protein CAEBREN_03301 [Caenorhabditis brenneri]
Length = 449
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 275 DEKLGVGAGKMVPI-------ETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
D L VG VPI ++N E+ E+ C +CL+ ++ G ++ L CN
Sbjct: 339 DRHLFVGIEIDVPIGATRAEIDSNSTMYKYEKTEGDEET-CTVCLTDFDTGDDVRKLRCN 397
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNILKG 355
H FH CI KWL +N CP+C+ I KG
Sbjct: 398 HMFHPGCIEKWLDINKKCPMCRKEIDKG 425
>gi|224093806|ref|XP_002310000.1| predicted protein [Populus trichocarpa]
gi|222852903|gb|EEE90450.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 270 EVQNNDEKLGVGAGKMVPI--ETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
EV N D+ + + + + I +TN E+I P EC +CLS + +G + L C+
Sbjct: 38 EVANPDKLFRIISTQYLNIIEKTNPTLHYCEKITRPRSRECAVCLSEFTEGERVRTLKCH 97
Query: 328 HHFHSTCIVKWLKMN-ATCPLCKYNIL 353
H FH+ C+ KWL + ATCPLC+ +L
Sbjct: 98 HTFHNECLDKWLHQSMATCPLCRTVVL 124
>gi|351708433|gb|EHB11352.1| RING finger protein 44 [Heterocephalus glaber]
Length = 437
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%)
Query: 288 IETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
IE Y N E C +C S +E L LPCNH FH+ C+ KWLK N TCP+
Sbjct: 365 IEQLPSYRFNSDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPI 424
Query: 348 CK 349
C+
Sbjct: 425 CR 426
>gi|226500604|ref|NP_001150413.1| LOC100284043 [Zea mays]
gi|195639078|gb|ACG39007.1| protein binding protein [Zea mays]
gi|219888467|gb|ACL54608.1| unknown [Zea mays]
gi|414881944|tpg|DAA59075.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 374
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY Q A EA + LPK+R K VP + +
Sbjct: 201 LYLTDAQREAVEALIQELPKFRL--------------KAVPTDC---------------S 231
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 232 ECPICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 278
>gi|431916794|gb|ELK16555.1| E3 ubiquitin-protein ligase rnf12-A [Pteropus alecto]
Length = 608
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
C IC++ Y +G L LPC+H +H CI +WL N TCP+C+ ++ +E
Sbjct: 554 CGICITEYSEGNRLRILPCSHEYHVHCIDRWLAENTTCPICRGKVVDSDE 603
>gi|301133576|gb|ADK63410.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 312
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 255 GASEADLSILPKYRFEVQ----NNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
GAS ++ I P + +Q N+ + G + +E E L +C +
Sbjct: 132 GASLSEYFIGPGFEALLQRLTDNDPNRYGTPPAQKEAVEALASVKIQEPTL-----QCSV 186
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
CL +E G E +PC H FH C++ WL+++++CP+C+Y +
Sbjct: 187 CLDEFEIGVEAKEMPCEHKFHGECLLPWLELHSSCPVCRYEL 228
>gi|26324686|dbj|BAC26097.1| unnamed protein product [Mus musculus]
gi|126362033|gb|AAI31958.1| Ring finger protein 43 [Mus musculus]
Length = 657
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 145 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGD 193
>gi|302787342|ref|XP_002975441.1| hypothetical protein SELMODRAFT_442810 [Selaginella moellendorffii]
gi|300157015|gb|EFJ23642.1| hypothetical protein SELMODRAFT_442810 [Selaginella moellendorffii]
Length = 277
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
ED +C +CLS Y+ G +L LP C+H FH CI +WL N+TCP+C+ ++ G
Sbjct: 96 EDNQCAVCLSDYQPGEKLQQLPVCDHIFHVECIDEWLANNSTCPICRGSLHHGK 149
>gi|428182930|gb|EKX51789.1| hypothetical protein GUITHDRAFT_57272, partial [Guillardia theta
CCMP2712]
Length = 58
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
ED EC ICLS + G + LPC H FH CI +WL+ + CPLC N+
Sbjct: 10 EDKECMICLSGFRTGERIRMLPCLHTFHKLCIDEWLQTHEQCPLCMQNV 58
>gi|72013641|ref|XP_785546.1| PREDICTED: RING finger protein 150-like [Strongylocentrotus
purpuratus]
Length = 445
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 274 NDEKLGVGAGKMV---PIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
++LG A K++ P+ T V + + E C ICL Y L LPC H +
Sbjct: 228 TQKQLGRAAKKVIAKLPLRT----VKDGDQEMVEIEACPICLEFYRISDILRVLPCKHSY 283
Query: 331 HSTCIVKWLKMNATCPLCKYNILKG 355
H TC+ +WL N TCP+CK NILK
Sbjct: 284 HKTCVDQWLVENRTCPMCKLNILKA 308
>gi|224170860|ref|XP_002339432.1| predicted protein [Populus trichocarpa]
gi|222875105|gb|EEF12236.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI---LKGNE 357
+C +C+ E G+E +PC+H +HS CIV+WL+ + +CPLC+Y++ KG E
Sbjct: 121 DCTVCMEGIEAGSEATRMPCSHVYHSDCIVQWLRTSYSCPLCRYHMPGNFKGYE 174
>gi|296193541|ref|XP_002806653.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Callithrix
jacchus]
Length = 562
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 27/101 (26%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N D + +E+ L C +
Sbjct: 480 AKPRGLTKADIEQLPSYRF---NPDSR------------------QSEQTL------CVV 512
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
C S +E L L CNH FH+ C+ KWLK N TCP+C+ +
Sbjct: 513 CFSDFEVRQLLRVLXCNHEFHTKCVDKWLKANRTCPICRAD 553
>gi|242019016|ref|XP_002429963.1| protein goliath precursor, putative [Pediculus humanus corporis]
gi|212515014|gb|EEB17225.1| protein goliath precursor, putative [Pediculus humanus corporis]
Length = 348
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 305 DAECC-ICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
D ECC +C+ Y +L LPC H FH CI WL + TCP+CK NILK
Sbjct: 265 DGECCAVCIEPYRVTEDLRILPCRHEFHKICIDPWLMEHRTCPMCKMNILK 315
>gi|50370346|gb|AAH75707.1| Rnf43 protein, partial [Mus musculus]
Length = 703
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 189 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGD 237
>gi|224073019|ref|XP_002303951.1| predicted protein [Populus trichocarpa]
gi|224144358|ref|XP_002336133.1| predicted protein [Populus trichocarpa]
gi|222841383|gb|EEE78930.1| predicted protein [Populus trichocarpa]
gi|222873819|gb|EEF10950.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 297 NERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
+ R+ P + C ICLS Y + +P CNH FH+ CI WLKMNATCPLC+
Sbjct: 100 SRRLPKPNEGPCSICLSDYLPKDTIRCIPYCNHCFHADCIDGWLKMNATCPLCR 153
>gi|242067375|ref|XP_002448964.1| hypothetical protein SORBIDRAFT_05g002550 [Sorghum bicolor]
gi|241934807|gb|EES07952.1| hypothetical protein SORBIDRAFT_05g002550 [Sorghum bicolor]
Length = 173
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
E EC +CL YE G L +PC H FH CI WL+++ CPLC++ +
Sbjct: 117 ERGECAVCLEEYEAGDALRTMPCAHGFHERCIFGWLRLSRLCPLCRFAL 165
>gi|224120674|ref|XP_002318389.1| predicted protein [Populus trichocarpa]
gi|222859062|gb|EEE96609.1| predicted protein [Populus trichocarpa]
Length = 143
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 243 IIAILYAVAGQ--EGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANE-- 298
++ +L + G+ + A + L LP+ V N + K+ + IE+ V E
Sbjct: 21 LLGLLCFICGRVMKCARRSPLGGLPEMNSTV-NPETKVIIAGLDGPTIESYPRIVLGESR 79
Query: 299 RILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYN 351
R+ P+D C ICL Y+ L +P C H FHS CI +WL +NATCP+C+Y+
Sbjct: 80 RLPKPDDNTCSICLCEYKPKETLKTIPECKHCFHSDCIDEWLLLNATCPICRYS 133
>gi|357477371|ref|XP_003608971.1| RING finger protein [Medicago truncatula]
gi|355510026|gb|AES91168.1| RING finger protein [Medicago truncatula]
Length = 365
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY Q A EA + LPK+R K VP + +
Sbjct: 186 LYLTPAQREAVEALIQELPKFRL--------------KAVPTDC---------------S 216
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 217 ECPICLEEFRVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVF 263
>gi|297461436|ref|XP_871924.4| PREDICTED: RING finger protein 150 [Bos taurus]
Length = 408
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N +LG A K + ++ + P+ C +C+ Y+ +
Sbjct: 204 RFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKEMEPDFDNCAVCIEGYKPNDIVRI 263
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 264 LPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 295
>gi|226494941|ref|NP_001148613.1| LOC100282229 [Zea mays]
gi|195620824|gb|ACG32242.1| RING finger protein 126 [Zea mays]
Length = 371
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C +CL +E G E +PC H FHS CI+ WL+++++CP+C++ +
Sbjct: 253 CSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICRFQL 297
>gi|413945227|gb|AFW77876.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 527
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL YE+G L LPC+H FH TC+ KWLK ++ CPLC+ ++ + +
Sbjct: 467 EAAQCYICLVEYEEGDCLRILPCHHEFHLTCVDKWLKEIHRVCPLCRGDVCRSD 520
>gi|332246425|ref|XP_003272354.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 1 [Nomascus
leucogenys]
gi|332246427|ref|XP_003272355.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 2 [Nomascus
leucogenys]
Length = 783
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|218186416|gb|EEC68843.1| hypothetical protein OsI_37428 [Oryza sativa Indica Group]
Length = 197
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
C +CL +E G +L +PC+H FH+TCI+ WL+++ CPLC++
Sbjct: 146 CAVCLEDFEAGEKLRRMPCSHCFHATCILDWLRLSHRCPLCRF 188
>gi|395521044|ref|XP_003764631.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Sarcophilus
harrisii]
Length = 242
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
+ C IC+++Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 189 NKACSICVNTYTQGNKLRQLPCTHEFHVHCIDRWLAENNTCPICRQPVLDTN 240
>gi|384498957|gb|EIE89448.1| hypothetical protein RO3G_14159 [Rhizopus delemar RA 99-880]
Length = 261
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 292 GGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKY 350
G + NE+ E++ C ICL YE G+EL LPCNH FH+ C+ WL CP+CK
Sbjct: 186 GIKIFNEK---EEESCCAICLEDYEKGSELRLLPCNHQFHTFCVDAWLMTQRKLCPICKR 242
Query: 351 NI 352
+I
Sbjct: 243 DI 244
>gi|349604814|gb|AEQ00261.1| RING finger protein 115-like protein, partial [Equus caballus]
Length = 113
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
EC +C Y E+ LPCNH FHS+CIV WL+++ TCP+C+ ++
Sbjct: 36 ECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 81
>gi|194700678|gb|ACF84423.1| unknown [Zea mays]
gi|413932667|gb|AFW67218.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 371
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C +CL +E G E +PC H FHS CI+ WL+++++CP+C++ +
Sbjct: 253 CSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICRFQL 297
>gi|449463838|ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449519040|ref|XP_004166543.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 362
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 299 RILLPEDA--ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
R+ L ED+ +C +CL +E E +PC H FH+ CI+ WL+++++CP+C++ L G+
Sbjct: 232 RVELEEDSCLQCSVCLDEFEVDEEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQ-LPGD 290
Query: 357 E 357
E
Sbjct: 291 E 291
>gi|449440682|ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
gi|449518937|ref|XP_004166492.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
Length = 377
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY Q A EA + LPK+R K VP + +
Sbjct: 203 LYLTPAQREAVEALIEELPKFRL--------------KAVPTDC---------------S 233
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 234 ECPICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVF 280
>gi|403353724|gb|EJY76407.1| hypothetical protein OXYTRI_02086 [Oxytricha trifallax]
Length = 354
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 274 NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHST 333
N E+ G+ + +++ +++ V + L E CCICL ++ + L C H FH T
Sbjct: 271 NYEREGLSSIELLRLQSEKYQVNTD---LEESESCCICLDNFTQDQFVRRLGCKHMFHKT 327
Query: 334 CIVKWLKMNATCPLCKYNILKGNEQ 358
C+ KWL CPLCK NI+ + Q
Sbjct: 328 CLDKWLIRCGACPLCKTNIVAQDLQ 352
>gi|402899777|ref|XP_003912864.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 2 [Papio
anubis]
Length = 742
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 231 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 279
>gi|390179083|ref|XP_003736797.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859705|gb|EIM52870.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1224
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
Y N + + C +C+ +E L LPC+H FH+ C+ KWL+ N TCP+C+ N
Sbjct: 1115 YKYNPEVHNGDQTSCVVCMCDFELKQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGN 1172
>gi|297819412|ref|XP_002877589.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323427|gb|EFH53848.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 31/108 (28%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPED- 305
LY Q A EA + LPK+R + +P+D
Sbjct: 203 LYLTPAQAEAVEALIQELPKFRLKA------------------------------VPDDC 232
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 233 GECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>gi|115463671|ref|NP_001055435.1| Os05g0389600 [Oryza sativa Japonica Group]
gi|48926652|gb|AAT47441.1| unknown protein, contains zinc finger domain, PF00097 [Oryza sativa
Japonica Group]
gi|113578986|dbj|BAF17349.1| Os05g0389600 [Oryza sativa Japonica Group]
gi|215715354|dbj|BAG95105.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 549
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL Y +G + LPCNH FH TC+ KWLK ++ CPLC+ ++ + N
Sbjct: 488 EAAQCYICLVEYAEGDCVRILPCNHEFHLTCVDKWLKEIHRVCPLCRGDVCRSN 541
>gi|390355526|ref|XP_790205.3| PREDICTED: uncharacterized protein LOC585279 isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 27/109 (24%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G S+A++ LP YR+ + P N D CC+
Sbjct: 408 AKPRGLSKANIDQLPSYRYNPE-------------TPRTIN-------------DQTCCV 441
Query: 311 -CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
C+S +E L LPC+H FH+ C+ KWLK N TCP+C+ + + N Q
Sbjct: 442 VCMSDFETRQTLRVLPCSHEFHARCVDKWLKSNRTCPICRADASEINSQ 490
>gi|356523640|ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 209
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 299 RILLPED-----AECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
RIL ED + CC+CL +E EL +P CNH FH +CI WL+ N+TCPLC+ +I
Sbjct: 94 RILFDEDLRTRDSVCCVCLGEFELNEELLQIPYCNHVFHISCICNWLQSNSTCPLCRCSI 153
Query: 353 LKGNE 357
+ ++
Sbjct: 154 IPSSK 158
>gi|332248066|ref|XP_003273182.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Nomascus
leucogenys]
gi|332248068|ref|XP_003273183.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Nomascus
leucogenys]
gi|332248070|ref|XP_003273184.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Nomascus
leucogenys]
gi|332248072|ref|XP_003273185.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Nomascus
leucogenys]
gi|332248074|ref|XP_003273186.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Nomascus
leucogenys]
Length = 685
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|296478761|tpg|DAA20876.1| TPA: ring finger protein 150-like [Bos taurus]
Length = 278
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N +LG A K + ++ + P+ C +C+ Y+ +
Sbjct: 74 RFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKEMEPDFDNCAVCIEGYKPNDIVRI 133
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 134 LPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 165
>gi|428181381|gb|EKX50245.1| hypothetical protein GUITHDRAFT_50560, partial [Guillardia theta
CCMP2712]
Length = 50
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
E C ICL + +G EL +LPC H FH CI +WL++++ CPLCK ++L
Sbjct: 1 EKPTCSICLGEFAEGEELKSLPCVHVFHCACIDQWLRLSSECPLCKRSVL 50
>gi|403254025|ref|XP_003919782.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403254027|ref|XP_003919783.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403254029|ref|XP_003919784.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Saimiri
boliviensis boliviensis]
gi|403254031|ref|XP_003919785.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|297829880|ref|XP_002882822.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328662|gb|EFH59081.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 294
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+C +CL +E G E +PC H FHS C++ WL+++++CP+C+Y
Sbjct: 213 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRY 256
>gi|26449875|dbj|BAC42060.1| unknown protein [Arabidopsis thaliana]
Length = 358
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 31/108 (28%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPED- 305
LY Q A EA + LPK+R + +P+D
Sbjct: 203 LYLTPAQTEAVEALIQELPKFRLKA------------------------------VPDDC 232
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 233 GECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>gi|30692957|ref|NP_190382.2| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
gi|302595901|sp|Q8GYT9.2|SIS3_ARATH RecName: Full=E3 ubiquitin-protein ligase SIS3; AltName:
Full=Protein SUGAR INSENSITIVE 3; Flags: Precursor
gi|332644833|gb|AEE78354.1| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
Length = 358
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 31/108 (28%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPED- 305
LY Q A EA + LPK+R + +P+D
Sbjct: 203 LYLTPAQTEAVEALIQELPKFRLKA------------------------------VPDDC 232
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 233 GECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>gi|390458749|ref|XP_002743748.2| PREDICTED: RING finger protein 215 [Callithrix jacchus]
Length = 432
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
P C +CL + + L LPC H FH C+ WL + TCPLCK+N+L GN
Sbjct: 376 PSAETCAVCLDYFCNKQRLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL-GN 428
>gi|359074503|ref|XP_002694410.2| PREDICTED: RING finger protein 150 [Bos taurus]
Length = 279
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N +LG A K + ++ + P+ C +C+ Y+ +
Sbjct: 75 RFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKEMEPDFDNCAVCIEGYKPNDIVRI 134
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 135 LPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 166
>gi|224077684|ref|XP_002305361.1| predicted protein [Populus trichocarpa]
gi|222848325|gb|EEE85872.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 299 RILLPEDA-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
RI + E +C ICL+ G+EL +PC H FHS CI +WL+++ +CP+C++ ++
Sbjct: 73 RITVQEGGNDCAICLNEIGIGSELREMPCKHGFHSGCIEQWLRIHGSCPVCRFTMM 128
>gi|194692670|gb|ACF80419.1| unknown [Zea mays]
gi|414866069|tpg|DAA44626.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 207
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 257 SEADLSILPKYRFEVQ-----------NNDEKLGVGAGKMVPIETNGGYVANERILLPED 305
SE +++ LP ++++VQ + +L V + E G A+ ED
Sbjct: 82 SEEEINSLPVFKYKVQAQQRHPPARKSDGPSQLSVSSTGSGNEEKQDGLKADGTSKPSED 141
Query: 306 A-ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C +CL G L +LPC H FH CI WL+ TCP+CK+ + G
Sbjct: 142 ELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSDG 192
>gi|145505561|ref|XP_001438747.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405919|emb|CAK71350.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+PED C +CL +++ ++ LPC H +HS+CI WL+ N CPLCK I
Sbjct: 277 MPEDK-CSVCLFEFKEEEKVRELPCKHIYHSSCIKNWLQNNKQCPLCKTEI 326
>gi|426374972|ref|XP_004054327.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Gorilla
gorilla gorilla]
gi|426374974|ref|XP_004054328.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Gorilla
gorilla gorilla]
gi|426374976|ref|XP_004054329.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Gorilla
gorilla gorilla]
gi|426374978|ref|XP_004054330.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Gorilla
gorilla gorilla]
gi|426374980|ref|XP_004054331.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Gorilla
gorilla gorilla]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|402591804|gb|EJW85733.1| hypothetical protein WUBG_03358, partial [Wuchereria bancrofti]
Length = 499
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
D +C +C+ Y G + +LPC H FH TC+ WL + TCP+CK +ILK
Sbjct: 223 DTDCPVCIDPYRAGDIIRSLPCRHIFHKTCVDPWLLEHRTCPMCKSDILKA 273
>gi|355568572|gb|EHH24853.1| hypothetical protein EGK_08580 [Macaca mulatta]
Length = 785
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 274 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 322
>gi|118489091|gb|ABK96352.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 296
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPE-DAECCICLSSYEDGTELHALPCNHH 329
+N+ + G IE E ++ E + +C +C +E G E+ +PC H
Sbjct: 166 AENDPNRYGTPPASKKAIEALPTMKVTEEMMKSEMNNQCAVCKDEFEGGEEVKGMPCKHV 225
Query: 330 FHSTCIVKWLKMNATCPLCKYNI 352
FH CI+ WL M+ +CP+C+Y +
Sbjct: 226 FHEDCIIPWLNMHNSCPVCRYEL 248
>gi|405120831|gb|AFR95601.1| hypothetical protein CNAG_02219 [Cryptococcus neoformans var.
grubii H99]
Length = 534
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
+C +C +E G E+ +PC H +H C+V WL+ N TCP+C+++++ ++Q
Sbjct: 300 DCPVCKDDFEIGNEVMLIPCGHIYHPDCLVPWLRQNGTCPVCRFSLVSEDQQ 351
>gi|355754041|gb|EHH58006.1| hypothetical protein EGM_07767 [Macaca fascicularis]
Length = 785
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 274 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 322
>gi|357461325|ref|XP_003600944.1| Zinc/RING finger protein [Medicago truncatula]
gi|355489992|gb|AES71195.1| Zinc/RING finger protein [Medicago truncatula]
Length = 173
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 304 EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
E+ ECCICL + DG +L LP C H+FH C+ KWL ++CPLC+
Sbjct: 102 EETECCICLGEFRDGEKLKVLPGCEHYFHCDCVDKWLTHQSSCPLCR 148
>gi|242062056|ref|XP_002452317.1| hypothetical protein SORBIDRAFT_04g023600 [Sorghum bicolor]
gi|241932148|gb|EES05293.1| hypothetical protein SORBIDRAFT_04g023600 [Sorghum bicolor]
Length = 378
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
EC +CL++++DG EL LP C+H FH CI WL+ + TCPLC+ N+
Sbjct: 130 ECAVCLTAFDDGDELRLLPQCSHAFHPDCIDPWLEDHITCPLCRANL 176
>gi|242052623|ref|XP_002455457.1| hypothetical protein SORBIDRAFT_03g011120 [Sorghum bicolor]
gi|241927432|gb|EES00577.1| hypothetical protein SORBIDRAFT_03g011120 [Sorghum bicolor]
Length = 359
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
A C +CL Y G +PC H FH+ CIV WL+M+++CP+C++ + +++
Sbjct: 226 ASCPVCLEDYAAGERAREMPCRHRFHANCIVPWLEMHSSCPVCRFQLPATDDK 278
>gi|225426346|ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
gi|297742332|emb|CBI34481.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 230 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIE 289
CLIGI+ CC+ C YA ++ +SI P V D IE
Sbjct: 245 CLIGIS--CCI-CGRIRTYARRRHRSDTDFAISIGPLPAVVVMGLDGPT---------IE 292
Query: 290 TNGGYVANERILLPE--DAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCP 346
+ V E + LP+ D C ICLS Y+ + +P CNH FH C+ +WLKMN TCP
Sbjct: 293 SYPKTVLGESMRLPKPSDGTCPICLSEYQPKDTIRTIPECNHCFHVDCVDEWLKMNPTCP 352
Query: 347 LCK 349
+C+
Sbjct: 353 VCR 355
>gi|388502780|gb|AFK39456.1| unknown [Medicago truncatula]
Length = 173
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 304 EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCK 349
E+ ECCICL + DG +L LP C H+FH C+ KWL ++CPLC+
Sbjct: 102 EETECCICLGEFRDGEKLKVLPGCEHYFHCDCVDKWLTHQSSCPLCR 148
>gi|326529613|dbj|BAK04753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C IC +E+G L ALPC H +HS CI +WL++N CP+C +
Sbjct: 239 QCVICRVEFEEGESLVALPCKHSYHSDCINQWLQLNKVCPMCSAEV 284
>gi|440895003|gb|ELR47309.1| RING finger protein 150, partial [Bos grunniens mutus]
Length = 291
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N +LG A K + ++ + P+ C +C+ Y+ +
Sbjct: 87 RFRYANARDRNQRRLGDAAKKAISKLQVRTIKKGDKEMEPDFDNCAVCIEGYKPNDIVRI 146
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 147 LPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 178
>gi|432117387|gb|ELK37731.1| E3 ubiquitin-protein ligase RNF6 [Myotis davidii]
Length = 677
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C+S Y G +L LPC H FH CI +WL N TCP+C++ +L
Sbjct: 627 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRHPVL 672
>gi|402899775|ref|XP_003912863.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 1 [Papio
anubis]
Length = 783
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|296473789|tpg|DAA15904.1| TPA: ring finger protein 165-like [Bos taurus]
Length = 571
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D +C ICLS EDG ++ LPC H FH C+ +WL M+ CP+C+ +I
Sbjct: 516 DEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 563
>gi|47207180|emb|CAF92164.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNIL 353
C ICL YEDG +L LPC+H +HS C+ WL K TCP+CK ++
Sbjct: 174 CAICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVV 220
>gi|49781351|gb|AAT68478.1| unknown [Zea mays]
Length = 68
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLCKYNILKGN 356
E A+C ICL YE+G L LPC+H FH TC+ KWLK ++ CPLC+ ++ + +
Sbjct: 8 EAAQCYICLVEYEEGDCLRILPCHHEFHLTCVDKWLKEIHRVCPLCRGDVCRSD 61
>gi|297275258|ref|XP_001090387.2| PREDICTED: hypothetical protein LOC702104 [Macaca mulatta]
Length = 634
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
R VQN E+ +G +E D +C ICLS EDG ++ LPC
Sbjct: 542 RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCM 601
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNI 352
H FH C+ +WL M+ CP+C+ +I
Sbjct: 602 HLFHQLCVDQWLAMSKKCPICRVDI 626
>gi|147783582|emb|CAN68008.1| hypothetical protein VITISV_014950 [Vitis vinifera]
Length = 409
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D+ C +C ++ G E+ LPCNH +HS CIV WL+++ +CP+C++ +
Sbjct: 233 DSHCPVCKEEFKVGEEVRELPCNHVYHSDCIVPWLQLHNSCPVCRHEV 280
>gi|402467073|gb|EJW02437.1| hypothetical protein EDEG_03141 [Edhazardia aedis USNM 41457]
Length = 244
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
DA C ICL+ Y + ++ LPC HHFH CI +W ++ CPLCK
Sbjct: 186 HDANCSICLNDYNENEKIKMLPCKHHFHVNCIDEWFNVDDICPLCK 231
>gi|397495091|ref|XP_003818395.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
gi|397495093|ref|XP_003818396.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
gi|397495095|ref|XP_003818397.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|114669537|ref|XP_001172611.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 1 [Pan
troglodytes]
gi|332848616|ref|XP_003315684.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 [Pan troglodytes]
Length = 783
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|6599239|emb|CAB63747.1| hypothetical protein [Homo sapiens]
Length = 366
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 313 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 361
>gi|5174653|ref|NP_005968.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|34305293|ref|NP_898864.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|34305295|ref|NP_898865.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|13124536|sp|Q9Y252.1|RNF6_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF6
gi|4583652|emb|CAB40413.1| RING-H2 [Homo sapiens]
gi|4583654|emb|CAB40414.1| RING-H2 [Homo sapiens]
gi|12331002|gb|AAG49400.1| ring-H2 protein [Homo sapiens]
gi|21961523|gb|AAH34688.1| Ring finger protein (C3H2C3 type) 6 [Homo sapiens]
gi|119628785|gb|EAX08380.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628786|gb|EAX08381.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628787|gb|EAX08382.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628788|gb|EAX08383.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|123981156|gb|ABM82407.1| ring finger protein (C3H2C3 type) 6 [synthetic construct]
gi|124000631|gb|ABM87824.1| ring finger protein (C3H2C3 type) 6 [synthetic construct]
gi|189065505|dbj|BAG35344.1| unnamed protein product [Homo sapiens]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|397493061|ref|XP_003817432.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 2 [Pan
paniscus]
Length = 742
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 231 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 279
>gi|225459511|ref|XP_002284442.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 333
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D+ C +C ++ G E+ LPCNH +HS CIV WL+++ +CP+C++ +
Sbjct: 233 DSHCPVCKEEFKVGEEVRELPCNHVYHSDCIVPWLQLHNSCPVCRHEV 280
>gi|156386240|ref|XP_001633821.1| predicted protein [Nematostella vectensis]
gi|156220896|gb|EDO41758.1| predicted protein [Nematostella vectensis]
Length = 283
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C +CL Y+ G + LPCNH +H CI WL + TCP+CK NILK
Sbjct: 226 CPVCLDGYKSGEVIRILPCNHEYHKLCIDPWLVEHRTCPMCKLNILK 272
>gi|114649066|ref|XP_509593.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 9 [Pan
troglodytes]
gi|114649068|ref|XP_001156347.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Pan
troglodytes]
gi|114649070|ref|XP_001156405.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 6 [Pan
troglodytes]
gi|114649072|ref|XP_001156461.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 7 [Pan
troglodytes]
gi|114649074|ref|XP_001156522.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 8 [Pan
troglodytes]
gi|410210058|gb|JAA02248.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410210060|gb|JAA02249.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410261394|gb|JAA18663.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410261396|gb|JAA18664.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410295664|gb|JAA26432.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410333895|gb|JAA35894.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|403274808|ref|XP_003929153.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 742
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 231 CAICLEEFSEGEELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 279
>gi|334331112|ref|XP_001377499.2| PREDICTED: RING finger protein 150-like [Monodelphis domestica]
Length = 364
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N +LG A K + ++ P+ C +C+ Y+ +
Sbjct: 160 RFRYANARDRNQRRLGDAAKKAISKLQVRTIKKGDKETEPDFDNCAVCIEGYKPNDVVRI 219
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 220 LPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 251
>gi|121715992|ref|XP_001275605.1| RING finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119403762|gb|EAW14179.1| RING finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 451
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
AEC IC+ S E GTE+ LPC H FH CI WL + TCP C+ I N+
Sbjct: 312 AECSICMESVEVGTEVTVLPCKHWFHYACIEAWLTQHNTCPHCRRGIDSSNQ 363
>gi|51476208|emb|CAH18094.1| hypothetical protein [Homo sapiens]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|218202524|gb|EEC84951.1| hypothetical protein OsI_32172 [Oryza sativa Indica Group]
Length = 325
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C IC +EDG L ALPC H +H CI +WL++N CP+C +
Sbjct: 272 QCVICRVEFEDGESLIALPCKHSYHPECINQWLQINKVCPMCSAEV 317
>gi|109114490|ref|XP_001106506.1| PREDICTED: RING finger protein 43-like isoform 1 [Macaca mulatta]
gi|109114492|ref|XP_001106574.1| PREDICTED: RING finger protein 43-like isoform 2 [Macaca mulatta]
Length = 783
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|426347360|ref|XP_004041321.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 1 [Gorilla
gorilla gorilla]
gi|426347362|ref|XP_004041322.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 2 [Gorilla
gorilla gorilla]
Length = 783
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|168003900|ref|XP_001754650.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694271|gb|EDQ80620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 294 YVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
Y A++ L +D C ICL Y+DG L LP C H FH+ CI WL+++A+CP+C+ +
Sbjct: 88 YTASQPPLNLQDNSCSICLGDYKDGDILRMLPECRHMFHAPCIDAWLRLHASCPMCRTSP 147
Query: 353 LK 354
L
Sbjct: 148 LP 149
>gi|242019730|ref|XP_002430312.1| RING finger protein, putative [Pediculus humanus corporis]
gi|212515427|gb|EEB17574.1| RING finger protein, putative [Pediculus humanus corporis]
Length = 145
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 280 VGAGKMVPIETNGGYVAN--ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVK 337
+G K +P + Y+ N + + +C +CL+ ++G E+ L CNH FH CI+
Sbjct: 38 LGEDKKLPPPASKEYIKNLKRETVHESEKQCPVCLTFSKEGEEMILLNCNHGFHPDCILP 97
Query: 338 WLKMNATCPLCKYNILKGNE 357
WL +TCPLC+Y + +E
Sbjct: 98 WLNRTSTCPLCRYEMPTDDE 117
>gi|413944084|gb|AFW76733.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 421
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
EC +CLS +ED EL LP C+H FH CI +WL + TCP+C+ N+
Sbjct: 143 ECAVCLSEFEDDEELRLLPSCSHAFHPDCIGEWLAGHVTCPVCRCNL 189
>gi|403274806|ref|XP_003929152.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 783
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGEELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|297274144|ref|XP_002800736.1| PREDICTED: RING finger protein 6 isoform 4 [Macaca mulatta]
Length = 745
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 692 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 740
>gi|115477677|ref|NP_001062434.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|42407550|dbj|BAD10755.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|42408731|dbj|BAD09949.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|113624403|dbj|BAF24348.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|125604240|gb|EAZ43565.1| hypothetical protein OsJ_28186 [Oryza sativa Japonica Group]
gi|215706910|dbj|BAG93370.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C IC +E+G L ALPC H +HS CI +WL++N CP+C +
Sbjct: 252 QCVICRVEFEEGESLVALPCKHSYHSECINQWLQLNKVCPMCSAEV 297
>gi|397621009|gb|EJK66053.1| hypothetical protein THAOC_13039, partial [Thalassiosira oceanica]
Length = 922
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+D C ICL + +G EL LPC H H TC+ WL N TCP C+Y++
Sbjct: 740 DDGCCPICLCEFSNGDELRVLPCGHEMHKTCLDAWLITNPTCPKCRYSM 788
>gi|356502289|ref|XP_003519952.1| PREDICTED: RING finger protein 126-like [Glycine max]
Length = 319
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G+S DL + + +Q+ + G + P A + E +C +CL
Sbjct: 175 GSSLNDLVVGSGFDLLLQHLAQIGPGGYSSVNPPAQKAAIEALPSVTSEEKFQCPVCLED 234
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
E G+E +PC H FH CIV WLK++ +CP+C++ +
Sbjct: 235 VEVGSEAKEMPCMHKFHGDCIVSWLKLHGSCPVCRFQM 272
>gi|326492275|dbj|BAK01921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 253
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC IC +Y++ +L LPC H +H TC+ KWLK+N CP+C +
Sbjct: 205 ECVICCMAYKNRDKLTTLPCQHQYHRTCVAKWLKINKVCPVCNKEVF 251
>gi|115480369|ref|NP_001063778.1| Os09g0535100 [Oryza sativa Japonica Group]
gi|50726579|dbj|BAD34213.1| unknown protein [Oryza sativa Japonica Group]
gi|113632011|dbj|BAF25692.1| Os09g0535100 [Oryza sativa Japonica Group]
gi|215697665|dbj|BAG91659.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 325
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C IC +EDG L ALPC H +H CI +WL++N CP+C +
Sbjct: 272 QCVICRVEFEDGESLIALPCKHSYHPECINQWLQINKVCPMCSAEV 317
>gi|414586982|tpg|DAA37553.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 388
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILK 354
EC +CL+++ED +L LP C+H FH CI WL+ TCPLC+ N+ K
Sbjct: 134 ECAVCLTAFEDDDDLRLLPHCSHAFHPECIDPWLQSRVTCPLCRANLEK 182
>gi|402579379|gb|EJW73331.1| hypothetical protein WUBG_15762 [Wuchereria bancrofti]
Length = 204
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
R Q N +L + IE + ++ LL E C IC +E + LPC
Sbjct: 46 RMAPQMNAARLPPKGMTKIEIEQLKSFRISDPALLMEKV-CVICQCDFEKRDMVRMLPCA 104
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNI 352
HHFH CI KWL+ N TCP+C+ N+
Sbjct: 105 HHFHLKCIDKWLRGNRTCPICRQNV 129
>gi|397493059|ref|XP_003817431.1| PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform 1 [Pan
paniscus]
Length = 783
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|395850185|ref|XP_003797677.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Otolemur
garnettii]
gi|395850187|ref|XP_003797678.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Otolemur
garnettii]
Length = 681
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L
Sbjct: 628 CSVCISDYVTGNKLRQLPCTHEFHIHCIDRWLSENCTCPVCRQPVL 673
>gi|383413211|gb|AFH29819.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
gi|384948634|gb|AFI37922.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|380815360|gb|AFE79554.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>gi|348514454|ref|XP_003444755.1| PREDICTED: hypothetical protein LOC100696086 [Oreochromis
niloticus]
Length = 1005
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 27/95 (28%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G ++ D+ LP YRF N+ E C +C+S
Sbjct: 927 GLTKGDIEQLPSYRFNPNNHQS---------------------------EQTLCVVCMSD 959
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+E L LPC+H FH C+ KWL+ N TCP+C+
Sbjct: 960 FESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICR 994
>gi|322712476|gb|EFZ04049.1| RING finger domain protein, putative [Metarhizium anisopliae ARSEF
23]
Length = 571
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 300 ILLPE-DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
L PE AEC IC+ + + G LPC H FH CIV WLK + TCP+C+ I KG ++
Sbjct: 320 FLGPEGKAECSICIDAMKVGEVATYLPCKHWFHDECIVPWLKQHNTCPVCRTPIEKGQQR 379
>gi|170592343|ref|XP_001900928.1| Goliath protein [Brugia malayi]
gi|158591623|gb|EDP30228.1| Goliath protein, putative [Brugia malayi]
Length = 519
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
D +C +C+ Y G + +LPC H FH TC+ WL + TCP+CK +ILK
Sbjct: 240 DTDCPVCIDPYRAGDIIRSLPCRHIFHKTCVDPWLLEHRTCPMCKSDILKA 290
>gi|115446829|ref|NP_001047194.1| Os02g0572200 [Oryza sativa Japonica Group]
gi|46806007|dbj|BAD17281.1| putative RING-H2 zinc finger protein ATL6 [Oryza sativa Japonica
Group]
gi|113536725|dbj|BAF09108.1| Os02g0572200 [Oryza sativa Japonica Group]
gi|215766504|dbj|BAG98812.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 349
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILK 354
EC +CL+ ++DG +L LP C+H FH CI WL+ + TCPLC+ N+ K
Sbjct: 122 ECAVCLTVFDDGDDLRLLPQCSHAFHPDCIDPWLEGHVTCPLCRANLEK 170
>gi|357128907|ref|XP_003566111.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 402
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 252 GQEGASEADLSILPKY----------RFEVQNNDEKLGVGAGKMVPIETNGGYVANERIL 301
G G+S D +L +Y + +N+ + G K +E A +
Sbjct: 218 GDHGSSSNDDGLLEEYVLGAGLSLLLQHLAENDTSRYGTPPAKKEVVE------ALPTVK 271
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+ E C +CL E G++ +PC H FHS+CI+ WL+++++CP+C++ +
Sbjct: 272 IEEVVSCSVCLDDLELGSQAKKMPCEHKFHSSCILPWLELHSSCPVCRFEL 322
>gi|355784877|gb|EHH65728.1| hypothetical protein EGM_02555, partial [Macaca fascicularis]
Length = 732
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ GN
Sbjct: 122 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII-GN 169
>gi|403347432|gb|EJY73138.1| E3 ubiquitin-protein ligase RNF6 [Oxytricha trifallax]
Length = 287
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 276 EKLGVGAG--KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHFHST 333
E+ GV K +PI+T G N L+ C ICL YE G ++ LPC H+FH
Sbjct: 209 EQFGVKDDILKKIPIKTLGKVDPN---LM-----CAICLKVYEKGNKVFFLPCKHNFHID 260
Query: 334 CIVKWLKMNATCPLCKYNI 352
CI W N CP C++NI
Sbjct: 261 CIKPWFDKNHVCPCCRFNI 279
>gi|296238115|ref|XP_002807996.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 43 [Callithrix
jacchus]
Length = 466
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGEELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|297700694|ref|XP_002827390.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 43 [Pongo
abelii]
Length = 688
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNIIEGD 320
>gi|149029497|gb|EDL84711.1| similar to ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 281
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 268 RFEVQNNDEKLGVGAG--KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
R VQN E+ K P ++ G E D +C ICLS EDG ++ LP
Sbjct: 189 RGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDT--DEKCTICLSMLEDGEDVRRLP 246
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNI 352
C H FH C+ +WL M+ CP+C+ +I
Sbjct: 247 CMHLFHQLCVDQWLAMSKKCPICRVDI 273
>gi|410918361|ref|XP_003972654.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 467
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ +P Y+F N+ E C +
Sbjct: 390 AKPRGLTKADIEHIPSYKFNSNNHHS---------------------------EQTMCVV 422
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C+ +E L LPC+H FH+ C+ KWLK N TCP+C+ + +
Sbjct: 423 CMCDFESRQLLRVLPCSHEFHAKCVDKWLKANRTCPICRAEVQR 466
>gi|357167711|ref|XP_003581296.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
distachyon]
Length = 340
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILK 354
EC +CL+++E+G +L LP C+H FH CI WL+ TCPLC+ N+ K
Sbjct: 84 ECAVCLTAFEEGDDLRLLPHCSHAFHPECIDPWLEARVTCPLCRANLEK 132
>gi|432952678|ref|XP_004085192.1| PREDICTED: uncharacterized protein LOC101170247, partial [Oryzias
latipes]
Length = 644
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N ++G A + + ++ + P+ C +C+ Y+ +
Sbjct: 113 RFRYANARDRNQRRMGDAAKQAISKLQVRTLKKGDKEIEPDFENCAVCIECYQPNDVVRI 172
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH C+ WL+ + TCP+CK NILK
Sbjct: 173 LPCRHAFHKHCVDPWLQDHRTCPMCKINILKA 204
>gi|348584606|ref|XP_003478063.1| PREDICTED: RING finger protein 215-like [Cavia porcellus]
Length = 381
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
P C +CL + + L LPC H FH C+ WL + TCPLCK+N+L GN
Sbjct: 324 PGTETCAVCLDYFYNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL-GN 376
>gi|67969356|dbj|BAE01030.1| unnamed protein product [Macaca fascicularis]
Length = 701
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 648 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 696
>gi|431896218|gb|ELK05634.1| RING finger protein 165 [Pteropus alecto]
Length = 404
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D +C ICLS EDG ++ LPC H FH C+ +WL M+ CP+C+ +I
Sbjct: 349 DEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 396
>gi|25012323|gb|AAN71273.1| LP11469p, partial [Drosophila melanogaster]
Length = 172
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D EC +C E+G + LPC H FH CI+ WLK +CPLC+Y +
Sbjct: 92 DLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYEL 139
>gi|334186091|ref|NP_001190129.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332646302|gb|AEE79823.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 266
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQ 358
+D C +CL +E + PC H FH CIV WLK CP+C++ ILK +Q
Sbjct: 168 DDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQ 222
>gi|119621880|gb|EAX01475.1| ring finger protein 165, isoform CRA_b [Homo sapiens]
Length = 260
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 268 RFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN 327
R VQN E+ +G +E D +C ICLS EDG ++ LPC
Sbjct: 168 RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCM 227
Query: 328 HHFHSTCIVKWLKMNATCPLCKYNI 352
H FH C+ +WL M+ CP+C+ +I
Sbjct: 228 HLFHQLCVDQWLAMSKKCPICRVDI 252
>gi|344269880|ref|XP_003406775.1| PREDICTED: RING finger protein 165-like [Loxodonta africana]
Length = 504
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D +C ICLS EDG ++ LPC H FH C+ +WL M+ CP+C+ +I
Sbjct: 449 DEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 496
>gi|297835334|ref|XP_002885549.1| hypothetical protein ARALYDRAFT_342455 [Arabidopsis lyrata subsp.
lyrata]
gi|297331389|gb|EFH61808.1| hypothetical protein ARALYDRAFT_342455 [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKY 350
+ E C ICL G E LPC HHFH CIV+WLK + CPLC++
Sbjct: 438 IEEKIGCTICLDELAVGAEASTLPCRHHFHKGCIVEWLKSSHFCPLCRF 486
>gi|294898774|ref|XP_002776368.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239883306|gb|EER08184.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 362
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 288 IETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCN--HHFHSTCIVKWLKMNATC 345
+E +G NE + +PE C ICLS + D + LPCN H FH CI +WL ++ C
Sbjct: 276 LEESGSRSPNEAVDVPE--SCPICLSDFSDDDSVMILPCNTRHVFHERCITQWLAVSQLC 333
Query: 346 PLCKYNI 352
P+C+ NI
Sbjct: 334 PICRANI 340
>gi|224119306|ref|XP_002318038.1| predicted protein [Populus trichocarpa]
gi|222858711|gb|EEE96258.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDA 306
LY Q A EA + LPK+R K VP + +
Sbjct: 214 LYLTPTQREAVEALIQELPKFRL--------------KAVPTDC---------------S 244
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 245 ECLICLEEFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVF 291
>gi|297792677|ref|XP_002864223.1| hypothetical protein ARALYDRAFT_918381 [Arabidopsis lyrata subsp.
lyrata]
gi|297310058|gb|EFH40482.1| hypothetical protein ARALYDRAFT_918381 [Arabidopsis lyrata subsp.
lyrata]
Length = 166
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 288 IETNGGYVANERILLP--EDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNAT 344
IE+ V E LP +DA C ICLS YE L +P C H FH+ CI +WLK+N T
Sbjct: 88 IESYPKIVLGESKRLPKVDDATCAICLSEYEAKETLRTIPPCQHCFHADCIDEWLKLNGT 147
Query: 345 CPLCK 349
CP+C+
Sbjct: 148 CPVCR 152
>gi|194373411|dbj|BAG56801.1| unnamed protein product [Homo sapiens]
Length = 329
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 276 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 324
>gi|145540942|ref|XP_001456160.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423970|emb|CAK88763.1| unnamed protein product [Paramecium tetraurelia]
Length = 341
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 301 LLPEDAECCICLSSYEDGTELHALPCN--HHFHSTCIVKWLKMNATCPLCKYNILKGN 356
+L + EC IC+ Y+ E+ +PC+ HHFH+TCI WL++ +TCP C+ +L N
Sbjct: 270 ILEGEQECSICMQPYQTDDEVLQMPCSTLHHFHNTCISAWLQIQSTCPNCRQQLLPDN 327
>gi|444728743|gb|ELW69187.1| RING finger protein 150 [Tupaia chinensis]
Length = 300
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 268 RFEVQN----NDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHA 323
RF N N +LG A K + ++ P+ C +C+ Y+ +
Sbjct: 96 RFRYANARDRNQRRLGDAAKKAISKLQVRTIKKGDKETEPDFDNCAVCIEGYKPNDVVRI 155
Query: 324 LPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
LPC H FH +C+ WL + TCP+CK NILK
Sbjct: 156 LPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 187
>gi|355754582|gb|EHH58483.1| E3 ubiquitin-protein ligase RNF6 [Macaca fascicularis]
Length = 701
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 648 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 696
>gi|297809095|ref|XP_002872431.1| hypothetical protein ARALYDRAFT_911182 [Arabidopsis lyrata subsp.
lyrata]
gi|297318268|gb|EFH48690.1| hypothetical protein ARALYDRAFT_911182 [Arabidopsis lyrata subsp.
lyrata]
Length = 320
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 16/137 (11%)
Query: 223 IFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGA 282
I V+LA I +++ C C+ LY+ A E AS+ L ++ E + +
Sbjct: 52 IAIVILALFISLSIVAC--CLHNTLYS-AEIEAASQEVLHTRARHGLEKEVIESFPSFLY 108
Query: 283 GKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKM 341
++ ++T G V EC +CLS +ED L +P C+H FH+ CI WL
Sbjct: 109 SEVKGLKTGKGGV-----------ECAVCLSEFEDQETLRWMPPCSHTFHANCIDVWLSS 157
Query: 342 NATCPLCKYNI-LKGNE 357
+TCP+C+ N+ K NE
Sbjct: 158 RSTCPVCRANLSQKPNE 174
>gi|196011289|ref|XP_002115508.1| hypothetical protein TRIADDRAFT_59522 [Trichoplax adhaerens]
gi|190581796|gb|EDV21871.1| hypothetical protein TRIADDRAFT_59522 [Trichoplax adhaerens]
Length = 350
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL--KMNATCPLCKYNILKGNEQV 359
C +CL YED +L LPCNH FH+ CI W+ + +TCPLCK I K EQ
Sbjct: 239 CAVCLEDYEDNDKLRLLPCNHAFHARCIDPWILGQDKSTCPLCKQPINKKAEQT 292
>gi|148677515|gb|EDL09462.1| mCG18269 [Mus musculus]
Length = 280
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 268 RFEVQNNDEKLGVGAG--KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
R VQN E+ K P ++ G E D +C ICLS EDG ++ LP
Sbjct: 188 RGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDT--DEKCTICLSMLEDGEDVRRLP 245
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNI 352
C H FH C+ +WL M+ CP+C+ +I
Sbjct: 246 CMHLFHQLCVDQWLAMSKKCPICRVDI 272
>gi|351715177|gb|EHB18096.1| E3 ubiquitin-protein ligase RLIM [Heterocephalus glaber]
Length = 466
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C IC+ Y + +L LPC+H +H CI +WL N+TCP+C+ +L GN Q
Sbjct: 413 CSICIRDYTEDNKLRKLPCSHEYHPHCIDRWLSENSTCPICRRTVLTSGNRQ 464
>gi|194900172|ref|XP_001979631.1| GG22947 [Drosophila erecta]
gi|190651334|gb|EDV48589.1| GG22947 [Drosophila erecta]
Length = 147
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D EC +C E+G + LPC H FH CI+ WLK +CPLC+Y +
Sbjct: 67 DLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYEL 114
>gi|344248155|gb|EGW04259.1| RING finger protein 165 [Cricetulus griseus]
Length = 280
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 268 RFEVQNNDEKLGVGAG--KMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
R VQN E+ K P ++ G E D +C ICLS EDG ++ LP
Sbjct: 188 RGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDT--DEKCTICLSMLEDGEDVRRLP 245
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNI 352
C H FH C+ +WL M+ CP+C+ +I
Sbjct: 246 CMHLFHQLCVDQWLAMSKKCPICRVDI 272
>gi|396468468|ref|XP_003838180.1| similar to PA and RING finger domain-containing protein
[Leptosphaeria maculans JN3]
gi|312214747|emb|CBX94701.1| similar to PA and RING finger domain-containing protein
[Leptosphaeria maculans JN3]
Length = 792
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 307 ECCICLSSYEDG-TELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNILKGNEQ 358
EC +CL YEDG +++ +LPC H FH+ CI WL TCP+CK ++++ Q
Sbjct: 623 ECVVCLEEYEDGVSQVMSLPCGHEFHANCITPWLVTRRRTCPICKGDVVRSLSQ 676
>gi|125539977|gb|EAY86372.1| hypothetical protein OsI_07750 [Oryza sativa Indica Group]
Length = 348
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILK 354
EC +CL+ ++DG +L LP C+H FH CI WL+ + TCPLC+ N+ K
Sbjct: 121 ECAVCLTVFDDGDDLRLLPQCSHAFHPDCIDPWLEGHVTCPLCRANLEK 169
>gi|109120346|ref|XP_001117726.1| PREDICTED: RING finger protein 6 isoform 1 [Macaca mulatta]
gi|297274140|ref|XP_002800734.1| PREDICTED: RING finger protein 6 isoform 2 [Macaca mulatta]
gi|297274142|ref|XP_002800735.1| PREDICTED: RING finger protein 6 isoform 3 [Macaca mulatta]
gi|355700880|gb|EHH28901.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 701
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 648 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 696
>gi|417404812|gb|JAA49142.1| Putative e3 ubiquitin-protein ligase rnf43 [Desmodus rotundus]
Length = 820
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI++G+
Sbjct: 309 CAICLEEFSEGQELRVISCLHEFHRACVDPWLHQHRTCPLCMFNIVEGD 357
>gi|338808408|gb|AEJ07912.1| ring-H2 zinc finger protein, partial [Zea luxurians]
Length = 299
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
EC +CLS +ED EL LP C+H FH CI +WL + TCP+C+ N+
Sbjct: 84 ECAVCLSEFEDDEELRLLPNCSHAFHPDCIGEWLAGHVTCPVCRCNL 130
>gi|195395466|ref|XP_002056357.1| GJ10273 [Drosophila virilis]
gi|194143066|gb|EDW59469.1| GJ10273 [Drosophila virilis]
Length = 1174
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYN 351
+ + C +C+ +E L LPC+H FH+ C+ KWL+ N TCP+C+ N
Sbjct: 1068 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGN 1115
>gi|145507746|ref|XP_001439828.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407023|emb|CAK72431.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 302 LPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+PED C +CL +++ ++ LPC H +HS+CI WL+ N CPLCK I
Sbjct: 276 IPEDK-CSVCLFEFKEEEKVRELPCKHIYHSSCIKNWLQNNKQCPLCKTEI 325
>gi|119621879|gb|EAX01474.1| ring finger protein 165, isoform CRA_a [Homo sapiens]
Length = 262
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D +C ICLS EDG ++ LPC H FH C+ +WL M+ CP+C+ +I
Sbjct: 207 DEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 254
>gi|38345496|emb|CAD41707.2| OSJNBa0010D21.9 [Oryza sativa Japonica Group]
gi|125549990|gb|EAY95812.1| hypothetical protein OsI_17683 [Oryza sativa Indica Group]
gi|125591860|gb|EAZ32210.1| hypothetical protein OsJ_16417 [Oryza sativa Japonica Group]
gi|215701084|dbj|BAG92508.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 667
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
E+ CCIC Y DG +L L C H FH C+ +WL + TCP+CK LK
Sbjct: 616 EEEPCCICQEEYVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPICKNTALK 666
>gi|410913829|ref|XP_003970391.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 578
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 27/95 (28%)
Query: 255 GASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSS 314
G ++ D+ LP YRF N+ E C +C+S
Sbjct: 500 GLTKGDIEQLPSYRFNPNNHQS---------------------------EQTLCVVCMSD 532
Query: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
+E L LPC+H FH C+ KWL+ N TCP+C+
Sbjct: 533 FESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICR 567
>gi|402901611|ref|XP_003913739.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Papio
anubis]
Length = 755
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 702 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPVLGSN 750
>gi|281343329|gb|EFB18913.1| hypothetical protein PANDA_019185 [Ailuropoda melanoleuca]
Length = 344
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNILKG 355
C ICL YEDG +L LPC H +HS C+ WL + TCP+CK + +G
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278
>gi|242076978|ref|XP_002448425.1| hypothetical protein SORBIDRAFT_06g026980 [Sorghum bicolor]
gi|241939608|gb|EES12753.1| hypothetical protein SORBIDRAFT_06g026980 [Sorghum bicolor]
Length = 398
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C +CL + DG L LP C+H FH CI KWLK ++ CPLC+ NI
Sbjct: 164 DCSVCLGEFRDGESLRLLPKCSHAFHQQCIDKWLKSHSNCPLCRSNI 210
>gi|242041829|ref|XP_002468309.1| hypothetical protein SORBIDRAFT_01g043460 [Sorghum bicolor]
gi|241922163|gb|EER95307.1| hypothetical protein SORBIDRAFT_01g043460 [Sorghum bicolor]
Length = 274
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+EC ICL + DG EL L C H FHSTC+ W++ A CP C+ NI
Sbjct: 224 SECSICLDGFYDGDELIRLRCGHRFHSTCLEPWVRKCADCPYCRTNI 270
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,916,579,350
Number of Sequences: 23463169
Number of extensions: 251699742
Number of successful extensions: 943943
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8459
Number of HSP's successfully gapped in prelim test: 4489
Number of HSP's that attempted gapping in prelim test: 929513
Number of HSP's gapped (non-prelim): 14556
length of query: 359
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 216
effective length of database: 9,003,962,200
effective search space: 1944855835200
effective search space used: 1944855835200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)