BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018193
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/359 (66%), Positives = 273/359 (76%), Gaps = 10/359 (2%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNA---ARPATLALLLGRATGRGHGPSMLVRETAA 58
S SSD+ A D HAPLLRPR ++ ARP LA+LLGR TG PSMLVRETAA
Sbjct: 3 SYSSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGH-RAPSMLVRETAA 61
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
R LEERR DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL
Sbjct: 62 RALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLF 121
Query: 119 HVVLVWMEYRRRN-TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESI 177
HVVLVW EY RRN TRR RD E + ++ D E + +D ST SF KRCESI
Sbjct: 122 HVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDN-----STTYSFVKRCESI 176
Query: 178 NTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALC 237
NT+ SF+WWI+GFYWVV GGD LL AP LYWL+V+FLA DVFFA+FCVVLACL+GIALC
Sbjct: 177 NTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALC 236
Query: 238 CCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVAN 297
CCLPCIIA+LYAVAG EG SEA+L +LP Y+F+ +++EK G GKMVPI NG +A
Sbjct: 237 CCLPCIIALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLAT 296
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
ER LL EDA+CCICLSSYEDG ELHALPCNHHFHSTCIVKWLKM ATCPLCKYNILKG
Sbjct: 297 ERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGT 355
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 313 bits (803), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 216/307 (70%), Gaps = 7/307 (2%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 84 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 143
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY +QC +H+ V +EYRRR RR +D GG N+ S+ + +
Sbjct: 144 VVGYGIQCWLHMACVCVEYRRRRRRRHPEDG-GGSGL--TNSSSQQYVSLAQLEDRGETS 200
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
+ K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF +FCV L
Sbjct: 201 NPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVAL 260
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPI 288
AC+IG+A+CCCLPCIIAILYAVA QEGAS+ D+ +PK+RF N EKL +GK I
Sbjct: 261 ACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKL---SGKARGI 317
Query: 289 ETNGGYVAN-ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPL 347
T G + ER L PEDAECCICL YEDG EL LPCNHHFH TCI KWL +N+ CPL
Sbjct: 318 MTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPL 377
Query: 348 CKYNILK 354
CK+NILK
Sbjct: 378 CKFNILK 384
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 227/352 (64%), Gaps = 41/352 (11%)
Query: 36 ALLLGRAT-GR-GHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ GR PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV V+ A+L
Sbjct: 60 ARFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAIL 119
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR------------------- 134
+++ E P +R+W+ GYALQC++H+V V +EYRRRN RR
Sbjct: 120 VMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSS 179
Query: 135 ----VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGF 190
+ ++ +G V + S + + + +S K ES NTM SF+WWI+GF
Sbjct: 180 SSSSLEEEALGSRRNSGVQDLS-------LGHLDTESSSVAKHLESANTMFSFIWWIIGF 232
Query: 191 YWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
YWV +GG L Q +PR+YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAV
Sbjct: 233 YWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAV 292
Query: 251 AGQEGASEADLSILPKYRF------EVQNNDEKLGVGAGKMVPIETNGGYVANERILLPE 304
A QEGAS+ D+ L K++F NDE G G M T+ E LL E
Sbjct: 293 ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPI---EHTLLQE 349
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
DAECCICLS+YEDGTEL LPC HHFH +C+ KWL +NATCPLCKYNILK +
Sbjct: 350 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSS 401
>sp|Q8LDB8|RING2_ARATH E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana
GN=At1g63170 PE=2 SV=2
Length = 381
Score = 285 bits (729), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 220/326 (67%), Gaps = 19/326 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR- 167
I GY LQC++H+V V +EYRRRN+RR RD ++ S DEEE + R S
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 168 -----------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLA 216
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLG 228
Query: 217 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN-- 274
FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+ L K++F +
Sbjct: 229 FDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTM 288
Query: 275 ----DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
DE+ G G V E G E L EDAECCICLS+YED TEL LPC HHF
Sbjct: 289 KHTVDEEQGQGDSGGVMTEC-GTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHF 347
Query: 331 HSTCIVKWLKMNATCPLCKYNILKGN 356
H C+ KWL +NATCPLCKYNILK +
Sbjct: 348 HCGCVDKWLYINATCPLCKYNILKSS 373
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++N+ E C +
Sbjct: 366 AKPRGLTKADIEQLPSYRFNLENHQS---------------------------EQTLCVV 398
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 399 CFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 437
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 266 KYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP 325
+Y N +LG A K + T ++ P+ C +C+ SY+ + LP
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 326 CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
C H FH +C+ WL + TCP+CK NILK
Sbjct: 282 CKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 433 AKPRGLTKADIEQLPSYRFNPNNHQS---------------------------EQTLCVV 465
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 466 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 382
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 383 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRE 597
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF N+ E C +
Sbjct: 436 AKPRGLTKADIEQLPSYRFNPSNHQS---------------------------EQTLCVV 468
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C+ +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 469 CMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 507
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIL 264
P Y+ +FLAF V ++ C++L L+ I L ++ S+ ++ L
Sbjct: 210 PTEYFDMGIFLAFFVVVSLVCLIL--LVKIKL----------------KQRRSQNSMNRL 251
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
E + G+ G A + + ++C ICL Y DG EL +
Sbjct: 252 AVQALEKMETRKFNSKSKGRR-----EGSCGALDTLSSGSTSDCAICLEKYIDGEELRVI 306
Query: 325 PCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 307 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 340
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
++C ICL Y DG EL +PC H FH C+ WL N TCP C++NI++
Sbjct: 200 SDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIE 248
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL-KGNEQ 358
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L GN +
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRE 621
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 264 LPKYRFEVQNNDEK----LGVGAGKMVPIETNGGYVANERILLPEDAECC-ICLSSYEDG 318
+ ++R+ +Q D++ V ++ I T G ++E+ L D++CC IC+ +Y+
Sbjct: 258 IQRFRY-MQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDL---DSDCCAICIEAYKPT 313
Query: 319 TELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+ LPC H FH CI WL + TCP+CK ++LK
Sbjct: 314 DTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 325 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 357
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 358 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 396
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
C +C++ Y +G +L LPC+H +H CI +WL N+TCP+C+ +L
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 613
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C ICL Y DG EL +PC H FH C+ WL N TCP C++NI++
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIE 312
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL--KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 343
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 27/99 (27%)
Query: 251 AGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCI 310
A G ++AD+ LP YRF ++ E C +
Sbjct: 268 AKPRGLTKADIEQLPSYRFNPDSHQS---------------------------EQTLCVV 300
Query: 311 CLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCK 349
C S +E L LPCNH FH+ C+ KWLK N TCP+C+
Sbjct: 301 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 271 VQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALPCNHHF 330
+N+ + G I+ + +L E +C +C+ +EDG+++ +PC H F
Sbjct: 179 AENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVF 238
Query: 331 HSTCIVKWLKMNATCPLCKYNI 352
H C++ WL+++ +CP+C++ +
Sbjct: 239 HQDCLLPWLELHNSCPVCRFEL 260
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL---KGN 356
C ICL Y DG EL +PC H FH C+ WL + TCP C++NI+ KGN
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNIIDQKKGN 318
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH TC+ WL + TCPLC +NI++G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGD 320
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 31/108 (28%)
Query: 247 LYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPED- 305
LY Q A EA + LPK+R + +P+D
Sbjct: 203 LYLTPAQTEAVEALIQELPKFRLKA------------------------------VPDDC 232
Query: 306 AECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353
EC ICL + G E+ LPC H+FH CI +WL++N CP C+ ++
Sbjct: 233 GECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L N
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D EC +C E+G + LPC H FH CI+ WLK +CPLC+Y +
Sbjct: 67 DLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYEL 114
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D +C ICLS EDG ++ LPC H FH C+ +WL M+ CP+C+ +I
Sbjct: 291 DEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
D +C ICLS EDG ++ LPC H FH C+ +WL M+ CP+C+ +I
Sbjct: 292 DEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
C ICL + +G EL + C H FH C+ WL + TCPLC +NI +G+
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGD 320
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNILKG 355
C ICL YEDG +L LPC H +HS C+ WL + TCP+CK + +G
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 217 FDVFFAIFCVVLACLI--GIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNN 274
FD I L C + ++L L C++ I + S A + R
Sbjct: 29 FDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAATG 88
Query: 275 DEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHALP-CNHHFHST 333
+K + K +P+ G + + + EC ICL +EDG ++ LP CNH FH
Sbjct: 89 LKKQAL---KQIPVGLYGSGIIDMKA-----TECLICLGDFEDGEKVRVLPKCNHGFHVR 140
Query: 334 CIVKWLKMNATCPLCKYNIL 353
CI WL ++CP C+ ++L
Sbjct: 141 CIDTWLLSRSSCPTCRQSLL 160
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
P C +CL + + L LPC H FH C+ WL + TCPLCK+N+L GN
Sbjct: 322 PGTETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL-GN 374
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNILKG 355
C ICL YEDG +L LPC H +HS C+ WL + TCP+CK + +G
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
C +C+S Y G +L LPC H FH CI +WL N TCP+C+ +L+
Sbjct: 614 CSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLE 660
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356
P C +CL + + L LPC H FH C+ WL + TCPLCK+N+L GN
Sbjct: 320 PGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL-GN 372
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
C IC YED +L LPC H +HS CI WLK+N CP+C +
Sbjct: 288 CVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV 332
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNILKG 355
C ICL YEDG +L LPC H +HS C+ WL + TCP+CK + +G
Sbjct: 230 CAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 257 SEADLSILPKYRFEVQNNDEKLGVGAGKMVPIETNGGYV---ANERILLPEDA-ECCICL 312
SE +++ LP ++++V D + G K ++ + ANE ED C +CL
Sbjct: 158 SEEEINALPVHKYKVL--DPENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCL 215
Query: 313 SSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKG 355
G + LPC H FH+ CI WL+ TCP+CK+ G
Sbjct: 216 EQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRAHSG 258
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 298 ERILLPEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354
+++L P+ C +C+ Y+ + L CNH FH CI WL + TCP+CK +ILK
Sbjct: 250 DKVLGPDGDSCAVCIEPYKPSDVVRILTCNHFFHKNCIDPWLLEHRTCPMCKCDILK 306
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNIL 353
C ICL YEDG +L LPC+H +H C+ WL K TCP+CK ++
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
EC +C Y E+ LPCNH FHS+CIV WL+++ TCP+C+ ++
Sbjct: 227 ECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 33/46 (71%)
Query: 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNI 352
+C +C+ +E+GTE +PC H +H C++ WL+++ +CP+C++ +
Sbjct: 223 QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHEL 268
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNIL 353
C ICL YEDG +L LPC+H +H C+ WL K TCP+CK ++
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNIL 353
C ICL YEDG +L LPC+H +H C+ WL K TCP+CK ++
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 308 CCICLSSYEDGTELHALPCNHHFHSTCIVKWL-KMNATCPLCKYNIL 353
C ICL YEDG +L LPC+H +H C+ WL K TCP+CK ++
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 302 LPEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
L + EC +CLS +ED L LP C H FH CI +WL+ +ATCPLC+ +
Sbjct: 118 LKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRV 169
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 65/149 (43%), Gaps = 37/149 (24%)
Query: 215 LAFDVFFAIFCVVLACLIGIAL-CCCLPCII-AILYAVAGQE--------GASEADLSIL 264
L+ D AI VVLA I + + CCL CI AGQ+ G + +
Sbjct: 46 LSADSIIAI--VVLAIFISLGMVSCCLHCIFYREEIGAAGQDVLHSRARRGLEKEVIESF 103
Query: 265 PKYRFEVQNNDEKLGVGAGKMVPIETNGGYVANERILLPEDAECCICLSSYEDGTELHAL 324
P + + E G+ GK GG EC ICLS +ED L +
Sbjct: 104 PTFLY-----SEVKGLKIGK-------GG------------VECAICLSEFEDQETLRWM 139
Query: 325 P-CNHHFHSTCIVKWLKMNATCPLCKYNI 352
P C+H FH+ CI WL +TCP+C+ N+
Sbjct: 140 PPCSHTFHANCIDVWLSSWSTCPVCRANL 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,850,454
Number of Sequences: 539616
Number of extensions: 5835760
Number of successful extensions: 21475
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 20903
Number of HSP's gapped (non-prelim): 609
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)