Query 018193
Match_columns 359
No_of_seqs 299 out of 2175
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 11:23:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018193.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018193hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyma_ g.44.1.1 (A:) EL5 RING 99.7 7.3E-19 5.3E-23 125.4 5.0 51 303-353 3-54 (55)
2 d1chca_ g.44.1.1 (A:) Immediat 99.5 4.2E-15 3.1E-19 110.0 5.1 49 304-354 4-52 (68)
3 d3dplr1 g.44.1.1 (R:19-106) RI 99.5 1.1E-14 7.7E-19 113.2 5.0 50 304-353 20-84 (88)
4 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.5 4.5E-15 3.3E-19 104.2 1.6 49 307-355 2-52 (52)
5 d1v87a_ g.44.1.1 (A:) Deltex p 99.4 2.8E-14 2.1E-18 115.6 4.9 52 303-354 23-94 (114)
6 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.4 3.2E-14 2.3E-18 104.3 4.2 53 304-356 2-57 (65)
7 d1fbva4 g.44.1.1 (A:356-434) C 99.4 1.1E-13 8.3E-18 105.2 5.2 49 305-356 23-72 (79)
8 d2baya1 g.44.1.2 (A:1-56) Pre- 99.2 1.4E-12 1E-16 92.5 2.1 46 307-355 2-48 (56)
9 d1bora_ g.44.1.1 (A:) Acute pr 99.2 1.1E-12 8.4E-17 93.0 1.5 47 305-357 6-52 (56)
10 d1vyxa_ g.44.1.3 (A:) IE1B pro 99.1 9.1E-12 6.6E-16 89.3 2.9 48 303-353 4-58 (60)
11 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.1 1.1E-11 7.9E-16 95.5 3.3 49 305-356 23-72 (86)
12 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.1 1.3E-11 9.4E-16 98.0 3.5 49 305-356 21-72 (103)
13 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.0 9E-11 6.5E-15 92.0 2.4 49 304-356 21-69 (97)
14 d2c2la2 g.44.1.2 (A:225-304) S 98.9 4.1E-10 3E-14 85.0 4.3 50 303-355 5-55 (80)
15 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.9 5.3E-10 3.9E-14 84.0 4.4 50 303-355 6-56 (78)
16 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.7 7.7E-09 5.6E-13 81.0 5.6 51 302-355 19-70 (98)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 98.5 1.8E-08 1.3E-12 77.8 2.7 45 305-349 5-57 (94)
18 d1f62a_ g.50.1.2 (A:) Williams 93.6 0.019 1.4E-06 38.0 2.6 44 307-350 2-49 (51)
19 d1we9a_ g.50.1.2 (A:) PHD fing 92.9 0.016 1.1E-06 40.3 1.4 49 303-351 4-58 (64)
20 d1fp0a1 g.50.1.2 (A:19-88) Nuc 91.1 0.083 6E-06 37.2 3.5 46 305-353 7-56 (70)
21 d1mm2a_ g.50.1.2 (A:) Mi2-beta 89.6 0.06 4.4E-06 36.8 1.6 49 304-355 8-60 (61)
22 d1wesa_ g.50.1.2 (A:) PHD Inhi 88.6 0.13 9.7E-06 36.4 2.9 45 304-351 14-65 (71)
23 d1weva_ g.50.1.2 (A:) PHD fing 86.3 0.055 4E-06 39.7 -0.4 48 305-352 16-73 (88)
24 d1wila_ g.50.1.3 (A:) Hypothet 86.2 0.18 1.3E-05 36.6 2.4 33 302-338 12-47 (89)
25 d1wepa_ g.50.1.2 (A:) PHD fing 86.2 0.54 3.9E-05 33.5 5.2 48 305-352 11-64 (79)
26 d1weea_ g.50.1.2 (A:) PHD fing 85.0 0.14 1E-05 35.9 1.3 44 307-351 18-66 (72)
27 d1wema_ g.50.1.2 (A:) Death as 84.1 0.39 2.8E-05 33.7 3.4 46 305-351 16-70 (76)
28 d1wewa_ g.50.1.2 (A:) Sumoylat 83.9 0.47 3.4E-05 33.7 3.9 45 306-352 17-73 (78)
29 d1rutx3 g.39.1.3 (X:83-113) LI 68.1 1.5 0.00011 25.7 2.1 28 307-335 4-31 (31)
30 d2pnxa1 g.50.1.2 (A:195-245) I 57.4 1.2 8.6E-05 28.9 0.3 39 307-350 4-50 (51)
31 d1z60a1 g.49.1.2 (A:328-386) T 57.3 2.4 0.00017 28.5 1.9 43 305-348 15-58 (59)
32 d1weoa_ g.44.1.1 (A:) Cellulos 41.2 19 0.0014 25.7 4.7 51 303-353 14-69 (93)
33 d1y02a2 g.50.1.1 (A:20-70) Rif 40.0 2.4 0.00017 27.5 -0.4 44 307-350 2-46 (51)
34 d1g47a1 g.39.1.3 (A:1-35) Pinc 37.6 12 0.0009 21.9 2.6 30 304-334 6-35 (35)
35 d1dvpa2 g.50.1.1 (A:149-220) H 37.4 12 0.00084 25.7 3.0 36 304-339 12-48 (72)
36 d1zbdb_ g.50.1.1 (B:) Effector 36.5 9.8 0.00071 28.8 2.7 31 305-335 48-80 (124)
37 d1x3ha2 g.39.1.3 (A:43-74) Leu 34.6 1.7 0.00012 25.6 -1.6 26 307-332 1-29 (32)
38 d1xioa_ f.13.1.1 (A:) Sensory 33.2 15 0.0011 30.6 3.6 106 58-194 65-185 (226)
39 d1x3ha1 g.39.1.3 (A:8-42) Leup 32.3 8.5 0.00062 22.8 1.3 26 306-334 9-34 (35)
40 d2dloa1 g.39.1.3 (A:8-42) Thyr 30.8 8.1 0.00059 23.0 1.0 25 306-334 9-34 (35)
41 d2cs3a1 g.44.1.3 (A:8-87) Prot 30.3 30 0.0022 23.7 4.1 35 306-341 9-45 (80)
42 d1v6ga1 g.39.1.3 (A:1-41) Acti 29.5 12 0.00089 23.0 1.7 27 305-334 15-41 (41)
43 d1yuza2 g.41.5.1 (A:167-202) N 29.1 19 0.0014 21.3 2.6 19 326-351 11-29 (36)
44 d1rutx4 g.39.1.3 (X:114-146) L 28.2 11 0.00078 21.7 1.2 13 344-356 1-13 (33)
45 d1rqga3 g.41.1.1 (A:139-173) M 27.8 13 0.00097 22.0 1.7 15 342-356 2-16 (35)
46 d1vfya_ g.50.1.1 (A:) vps27p p 27.4 24 0.0017 23.5 3.3 34 306-339 6-40 (67)
47 d2o35a1 a.293.1.1 (A:2-80) Hyp 27.2 9.5 0.00069 26.7 1.0 11 330-340 40-50 (79)
48 d2jnya1 b.171.1.1 (A:1-59) Unc 26.6 7.1 0.00052 26.0 0.2 18 336-353 4-21 (59)
49 d1x6aa1 g.39.1.3 (A:8-41) Lim 25.9 21 0.0015 20.8 2.2 27 305-334 8-34 (34)
50 d1uaza_ f.13.1.1 (A:) Archaerh 25.2 15 0.0011 31.0 2.1 101 64-194 88-197 (236)
51 d2d8va1 g.43.1.1 (A:8-61) Zinc 23.6 25 0.0018 22.7 2.5 26 308-337 4-30 (54)
52 d1e12a_ f.13.1.1 (A:) Halorhod 22.8 31 0.0023 28.8 3.9 99 64-194 85-193 (239)
53 d1joca1 g.50.1.1 (A:1348-1411) 21.3 30 0.0022 22.7 2.8 34 306-339 9-43 (64)
54 d2pk7a1 b.171.1.1 (A:3-61) Unc 21.0 14 0.0011 24.4 0.9 13 343-355 7-19 (59)
55 d1lkoa2 g.41.5.1 (A:148-191) R 20.7 22 0.0016 22.1 1.7 24 322-351 10-33 (44)
56 d2co8a2 g.39.1.3 (A:8-43) Nedd 20.0 30 0.0022 20.5 2.1 29 304-334 7-35 (36)
No 1
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.73 E-value=7.3e-19 Score=125.39 Aligned_cols=51 Identities=43% Similarity=1.102 Sum_probs=47.0
Q ss_pred CCCccccccCCCccCCCceEEcC-CCceeChhhHHHhhhcCCCCCccccccc
Q 018193 303 PEDAECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNIL 353 (359)
Q Consensus 303 ~~~~~C~ICL~~~~~~~~lr~Lp-C~H~FH~~CId~WL~~~~tCPlCR~~I~ 353 (359)
+++.+|+||+++|++++.++.+| |+|.||.+||++|++++++||+||++|.
T Consensus 3 ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEeE
Confidence 45678999999999999999886 9999999999999999999999999875
No 2
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.51 E-value=4.2e-15 Score=109.98 Aligned_cols=49 Identities=41% Similarity=0.883 Sum_probs=42.9
Q ss_pred CCccccccCCCccCCCceEEcCCCceeChhhHHHhhhcCCCCCcccccccC
Q 018193 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILK 354 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 354 (359)
..++|+||++.+.++ .+.+||+|.||.+||.+|++.+.+||+||+++.+
T Consensus 4 ~~d~C~IC~~~~~~~--~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~~ 52 (68)
T d1chca_ 4 VAERCPICLEDPSNY--SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCCCSC--EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCccCCcCccCC--cEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchHh
Confidence 346799999999753 5779999999999999999999999999998743
No 3
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.1e-14 Score=113.20 Aligned_cols=50 Identities=34% Similarity=0.625 Sum_probs=42.4
Q ss_pred CCccccccCCCccCCC---------------ceEEcCCCceeChhhHHHhhhcCCCCCccccccc
Q 018193 304 EDAECCICLSSYEDGT---------------ELHALPCNHHFHSTCIVKWLKMNATCPLCKYNIL 353 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~---------------~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~ 353 (359)
.+++|+||++++.+.. .+..++|+|.||..||++||+.+.+||+||++..
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 84 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 84 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCccc
Confidence 3456999999886533 3678899999999999999999999999999764
No 4
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4.5e-15 Score=104.18 Aligned_cols=49 Identities=20% Similarity=0.476 Sum_probs=41.8
Q ss_pred cccccCCCccCCCc-eEEcCCCceeChhhHHHhhhc-CCCCCcccccccCC
Q 018193 307 ECCICLSSYEDGTE-LHALPCNHHFHSTCIVKWLKM-NATCPLCKYNILKG 355 (359)
Q Consensus 307 ~C~ICL~~~~~~~~-lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~ 355 (359)
+|+||+++|++++. +..++|||.||.+|+++|++. +.+||+||+++.++
T Consensus 2 eCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~d 52 (52)
T d1ur6b_ 2 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPED 52 (52)
T ss_dssp EETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSCC
T ss_pred CCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCCC
Confidence 79999999987765 456689999999999999986 45799999988653
No 5
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=2.8e-14 Score=115.60 Aligned_cols=52 Identities=23% Similarity=0.502 Sum_probs=41.8
Q ss_pred CCCccccccCCCccC---------------CCceEEcCCCceeChhhHHHhhhcC-----CCCCcccccccC
Q 018193 303 PEDAECCICLSSYED---------------GTELHALPCNHHFHSTCIVKWLKMN-----ATCPLCKYNILK 354 (359)
Q Consensus 303 ~~~~~C~ICL~~~~~---------------~~~lr~LpC~H~FH~~CId~WL~~~-----~tCPlCR~~I~~ 354 (359)
..+.+|+||++++.+ ...++.++|+|.||.+||++||+.+ .+||+||+.+..
T Consensus 23 ~~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T d1v87a_ 23 APEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp CCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred cccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhcc
Confidence 345689999998853 3346788999999999999999754 389999987744
No 6
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=3.2e-14 Score=104.25 Aligned_cols=53 Identities=23% Similarity=0.492 Sum_probs=43.0
Q ss_pred CCccccccCCCccCC--CceEEcCCCceeChhhHHHhhhc-CCCCCcccccccCCC
Q 018193 304 EDAECCICLSSYEDG--TELHALPCNHHFHSTCIVKWLKM-NATCPLCKYNILKGN 356 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~--~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 356 (359)
++..|+||++++..+ ..+..++|||.||.+||.+|++. +.+||+||+++.+.+
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~~~ 57 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccccc
Confidence 457899999986433 34567789999999999999965 568999999987655
No 7
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=1.1e-13 Score=105.18 Aligned_cols=49 Identities=27% Similarity=0.732 Sum_probs=42.2
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHHHhhhc-CCCCCcccccccCCC
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKM-NATCPLCKYNILKGN 356 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 356 (359)
...|+||++.+.+ .+.+||||.||.+||++||+. +.+||+||.+|...+
T Consensus 23 ~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~ 72 (79)
T d1fbva4 23 FQLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 72 (79)
T ss_dssp TTBCTTTSSSBCC---EECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCC
T ss_pred CCCCccCCCcCCC---eEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCCc
Confidence 4579999998876 488999999999999999974 578999999997654
No 8
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.21 E-value=1.4e-12 Score=92.48 Aligned_cols=46 Identities=13% Similarity=0.167 Sum_probs=41.1
Q ss_pred cccccCCCccCCCceEEcC-CCceeChhhHHHhhhcCCCCCcccccccCC
Q 018193 307 ECCICLSSYEDGTELHALP-CNHHFHSTCIVKWLKMNATCPLCKYNILKG 355 (359)
Q Consensus 307 ~C~ICL~~~~~~~~lr~Lp-C~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 355 (359)
.|+||++.++++ ..++ |||.||.+||.+||+.+.+||+||+++..+
T Consensus 2 ~C~Ic~~~~~~P---v~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~~ 48 (56)
T d2baya1 2 LCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIE 48 (56)
T ss_dssp CCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGG
T ss_pred CCccCCchHHhc---CccCCCCCcccHHHHHHHHhhccCCCccCCcCCHH
Confidence 599999999876 5665 999999999999999999999999988654
No 9
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=1.1e-12 Score=93.03 Aligned_cols=47 Identities=26% Similarity=0.549 Sum_probs=40.5
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHHHhhhcCCCCCcccccccCCCC
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 357 (359)
..+|+||++.|.++ +.+||||.||..||++| +.+||+||+++..+.+
T Consensus 6 ~l~C~IC~~~~~~p---~~lpCgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~~ 52 (56)
T d1bora_ 6 FLRCQQCQAEAKCP---KLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGAD 52 (56)
T ss_dssp CSSCSSSCSSCBCC---SCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCSS
T ss_pred CCCCcccCcccCCC---EEecCCCHHhHHHHHcC---CCcCcCCCCcccCCCC
Confidence 35899999999876 67899999999999887 7789999999976543
No 10
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=99.12 E-value=9.1e-12 Score=89.35 Aligned_cols=48 Identities=23% Similarity=0.612 Sum_probs=37.9
Q ss_pred CCCccccccCCCccCCCceEEcCC-----CceeChhhHHHhhh--cCCCCCccccccc
Q 018193 303 PEDAECCICLSSYEDGTELHALPC-----NHHFHSTCIVKWLK--MNATCPLCKYNIL 353 (359)
Q Consensus 303 ~~~~~C~ICL~~~~~~~~lr~LpC-----~H~FH~~CId~WL~--~~~tCPlCR~~I~ 353 (359)
++...|.||+++++++ ...|| +|.||..||++|++ .+.+||+||+++.
T Consensus 4 ed~~~C~IC~~~~~~~---~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 4 EDVPVCWICNEELGNE---RFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCC---CCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCccCCCc---eeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeee
Confidence 4567899999998765 33444 59999999999995 4568999998763
No 11
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.12 E-value=1.1e-11 Score=95.50 Aligned_cols=49 Identities=31% Similarity=0.718 Sum_probs=42.0
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHHHhhhcC-CCCCcccccccCCC
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN-ATCPLCKYNILKGN 356 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~~ 356 (359)
...|+||++.+.+. ..++|||.|+..||.+|++.+ .+||.||.++.+.+
T Consensus 23 ~l~C~IC~~~~~~p---v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~ 72 (86)
T d1rmda2 23 SISCQICEHILADP---VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (86)
T ss_dssp HTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CcCCccCCcchhcc---eecCCCChhhHHHHHHHHhhCCCcCcccCCCCChhh
Confidence 35799999999876 789999999999999999754 58999999886543
No 12
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=1.3e-11 Score=98.00 Aligned_cols=49 Identities=37% Similarity=0.758 Sum_probs=41.4
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHHHhhhcCC---CCCcccccccCCC
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA---TCPLCKYNILKGN 356 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~~---tCPlCR~~I~~~~ 356 (359)
..+|+||++.|+++ ..+||||.||..||.+|++.+. +||+||.++...+
T Consensus 21 ~l~CpIC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 72 (103)
T d1jm7a_ 21 ILECPICLELIKEP---VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 (103)
T ss_dssp HTSCSSSCCCCSSC---CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTT
T ss_pred CcCCCccCchhCCe---EEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhh
Confidence 35799999999876 5689999999999999997653 7999999886543
No 13
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.95 E-value=9e-11 Score=92.00 Aligned_cols=49 Identities=20% Similarity=0.502 Sum_probs=39.7
Q ss_pred CCccccccCCCccCCCceEEcCCCceeChhhHHHhhhcCCCCCcccccccCCC
Q 018193 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGN 356 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 356 (359)
+...|+||++.|.++ +...+|||.||..||.+|+. .+||.||.++...+
T Consensus 21 ~~l~C~IC~~~~~~p--v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~ 69 (97)
T d1jm7b_ 21 KLLRCSRCTNILREP--VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQD 69 (97)
T ss_dssp HTTSCSSSCSCCSSC--BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSS
T ss_pred hcCCCccCCchhhcC--ceeCCCCCchhHHHHHHHHh--ccccccCCcCchhh
Confidence 346899999999876 23347999999999999984 46999999876543
No 14
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.90 E-value=4.1e-10 Score=85.04 Aligned_cols=50 Identities=12% Similarity=0.144 Sum_probs=43.5
Q ss_pred CCCccccccCCCccCCCceEEcCCCceeChhhHHHhhhc-CCCCCcccccccCC
Q 018193 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKM-NATCPLCKYNILKG 355 (359)
Q Consensus 303 ~~~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~ 355 (359)
+++..|+||++-|.++ ..++|||.|+..||.+|+.. +.+||.||.++...
T Consensus 5 P~~l~CpIc~~l~~dP---v~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~ 55 (80)
T d2c2la2 5 PDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQE 55 (80)
T ss_dssp CSTTBCTTTCSBCSSE---EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGG
T ss_pred CccccCcCcCchhhhh---cccCCcCeecHHHHHHHHhcCCccCCCcccccccc
Confidence 5678899999999887 67899999999999999975 55899999987643
No 15
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.88 E-value=5.3e-10 Score=83.96 Aligned_cols=50 Identities=28% Similarity=0.553 Sum_probs=43.8
Q ss_pred CCCccccccCCCccCCCceEEcCCCceeChhhHHHhhhcC-CCCCcccccccCC
Q 018193 303 PEDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN-ATCPLCKYNILKG 355 (359)
Q Consensus 303 ~~~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 355 (359)
+++..|+||++-|.++ ..++|||.|+..||.+|++.+ .+||.|+.++...
T Consensus 6 P~~l~CpIc~~~m~dP---V~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~ 56 (78)
T d1t1ha_ 6 PEYFRCPISLELMKDP---VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHA 56 (78)
T ss_dssp SSSSSCTTTSCCCSSE---EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSC
T ss_pred CccCCCcCcCchhhCc---eEccCCCcchHHHHHHHHHHCCCCCCcccccCCcc
Confidence 4678899999999987 678999999999999999875 5799999988654
No 16
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=7.7e-09 Score=81.05 Aligned_cols=51 Identities=16% Similarity=0.103 Sum_probs=45.0
Q ss_pred CCCCccccccCCCccCCCceEEcCCC-ceeChhhHHHhhhcCCCCCcccccccCC
Q 018193 302 LPEDAECCICLSSYEDGTELHALPCN-HHFHSTCIVKWLKMNATCPLCKYNILKG 355 (359)
Q Consensus 302 ~~~~~~C~ICL~~~~~~~~lr~LpC~-H~FH~~CId~WL~~~~tCPlCR~~I~~~ 355 (359)
.+++..|+||++-|.++ ..+||+ |.|...||.+||+.+.+||+|+.++...
T Consensus 19 ~P~~f~CPI~~~lm~dP---V~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~~ 70 (98)
T d1wgma_ 19 ACDEFLDPIMSTLMCDP---VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMD 70 (98)
T ss_dssp CCTTTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTT
T ss_pred CcHHhCCcCchhHHHHH---HhcccccchhhHHHHHHHHHhcCCcccccccccch
Confidence 45678999999999998 788866 5799999999999999999999988654
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=1.8e-08 Score=77.78 Aligned_cols=45 Identities=20% Similarity=0.576 Sum_probs=37.4
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHHHhhhcC--------CCCCccc
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMN--------ATCPLCK 349 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~--------~tCPlCR 349 (359)
..+|+||++++..++.+..++|+|.||.+|+..|++.+ -+||.|+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~ 57 (94)
T d1wima_ 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA 57 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTT
T ss_pred CCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCC
Confidence 46899999999887777777899999999999999531 2699854
No 18
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.60 E-value=0.019 Score=37.98 Aligned_cols=44 Identities=30% Similarity=0.591 Sum_probs=31.0
Q ss_pred cccccCCCccCCCceEEcCCCceeChhhHHHhhhcCC----CCCcccc
Q 018193 307 ECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA----TCPLCKY 350 (359)
Q Consensus 307 ~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~~----tCPlCR~ 350 (359)
.|.||-..-++++.+.-=.|+..||..|++.-+.... .||.||.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 5888976654443333334899999999998875433 5999985
No 19
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=92.88 E-value=0.016 Score=40.27 Aligned_cols=49 Identities=22% Similarity=0.491 Sum_probs=34.8
Q ss_pred CCCccccccCCCccCCCceEEc-CCCceeChhhHHHhh---h--cCCCCCccccc
Q 018193 303 PEDAECCICLSSYEDGTELHAL-PCNHHFHSTCIVKWL---K--MNATCPLCKYN 351 (359)
Q Consensus 303 ~~~~~C~ICL~~~~~~~~lr~L-pC~H~FH~~CId~WL---~--~~~tCPlCR~~ 351 (359)
.++..|.+|...+++++....= .|+..||..|++.=. . .+-.||.|+..
T Consensus 4 ~~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 3456899999998887664433 499999999997321 1 13379999754
No 20
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.08 E-value=0.083 Score=37.19 Aligned_cols=46 Identities=24% Similarity=0.501 Sum_probs=31.0
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHHHhhhcCC----CCCccccccc
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA----TCPLCKYNIL 353 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~~----tCPlCR~~I~ 353 (359)
...|.||.. .++.+.-=.|...||..|++..+.... .||.|+..-.
T Consensus 7 c~~C~~C~~---~~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 56 (70)
T d1fp0a1 7 ATICRVCQK---PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 56 (70)
T ss_dssp SSCCSSSCS---SSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCCCCCCCC---cCEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcCc
Confidence 456777753 344333334899999999998875543 5999976443
No 21
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.58 E-value=0.06 Score=36.85 Aligned_cols=49 Identities=29% Similarity=0.560 Sum_probs=33.3
Q ss_pred CCccccccCCCccCCCceEEcCCCceeChhhHHHhhhcCC----CCCcccccccCC
Q 018193 304 EDAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLKMNA----TCPLCKYNILKG 355 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~~~~----tCPlCR~~I~~~ 355 (359)
++..|.+|.+ .++.+.-=.|.-.||..|++.-+.... .||.|+..-.++
T Consensus 8 ~~~~C~~C~~---~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~~kg 60 (61)
T d1mm2a_ 8 HMEFCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKG 60 (61)
T ss_dssp SCSSCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCCTT
T ss_pred CcCCCcCCCC---CCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCcccCC
Confidence 3456999974 343222224889999999987765422 699998776654
No 22
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.59 E-value=0.13 Score=36.35 Aligned_cols=45 Identities=24% Similarity=0.645 Sum_probs=26.8
Q ss_pred CCccccccCCCccCCCceEEc--CCC-ceeChhhHHHhhhcC----CCCCccccc
Q 018193 304 EDAECCICLSSYEDGTELHAL--PCN-HHFHSTCIVKWLKMN----ATCPLCKYN 351 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~~lr~L--pC~-H~FH~~CId~WL~~~----~tCPlCR~~ 351 (359)
++..++||..... ++.+..- .|. ..||..|+. |... -.||.|+..
T Consensus 14 ~e~~~CiC~~~~~-~~~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 14 NEPTYCLCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp SSCCCSTTCCCCC-SSEECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CCCCEEEeCCCCC-CCEEEEECCCCCCcCccCccCC--CCcCCCCcEECcCCccc
Confidence 3345669987643 2322222 244 579999995 3332 269999864
No 23
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.33 E-value=0.055 Score=39.70 Aligned_cols=48 Identities=19% Similarity=0.471 Sum_probs=31.2
Q ss_pred CccccccCCCccC-CCceEEc-CCCceeChhhHHHhhh-----c---CCCCCcccccc
Q 018193 305 DAECCICLSSYED-GTELHAL-PCNHHFHSTCIVKWLK-----M---NATCPLCKYNI 352 (359)
Q Consensus 305 ~~~C~ICL~~~~~-~~~lr~L-pC~H~FH~~CId~WL~-----~---~~tCPlCR~~I 352 (359)
+..|.||.....+ +..+..= .|+..||..|++..+. . .=.||.|+...
T Consensus 16 ~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~ 73 (88)
T d1weva_ 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred cCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCchH
Confidence 4579999865433 2233322 3889999999886542 1 22699997644
No 24
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.23 E-value=0.18 Score=36.65 Aligned_cols=33 Identities=24% Similarity=0.746 Sum_probs=26.5
Q ss_pred CCCCccccccCCCccCCCceEEcC---CCceeChhhHHHh
Q 018193 302 LPEDAECCICLSSYEDGTELHALP---CNHHFHSTCIVKW 338 (359)
Q Consensus 302 ~~~~~~C~ICL~~~~~~~~lr~Lp---C~H~FH~~CId~W 338 (359)
..+|..|.|| +.|..++. +| |+-+||..|+.+-
T Consensus 12 v~~D~mC~vC-~v~t~~~l---~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 12 VVNDEMCDVC-EVWTAESL---FPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCSCCCTTT-CCCCSSCC---SSCSSSSSCCCHHHHHHH
T ss_pred CCcCcccccc-Ccccccce---ecceeecchhhHHHHHHh
Confidence 3567889999 77777743 46 7899999999986
No 25
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.23 E-value=0.54 Score=33.47 Aligned_cols=48 Identities=21% Similarity=0.425 Sum_probs=32.2
Q ss_pred CccccccCCCccCCCceEEc-CCCceeChhhHHH--hh-hc--CCCCCcccccc
Q 018193 305 DAECCICLSSYEDGTELHAL-PCNHHFHSTCIVK--WL-KM--NATCPLCKYNI 352 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~L-pC~H~FH~~CId~--WL-~~--~~tCPlCR~~I 352 (359)
...|+||...+.+++....= .|+-.||..|+.- .- .. +-.||.|+..-
T Consensus 11 ~pv~CiC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~ 64 (79)
T d1wepa_ 11 VPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCeEeECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCc
Confidence 34677999887766543333 4999999999952 21 11 24799998643
No 26
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=84.98 E-value=0.14 Score=35.91 Aligned_cols=44 Identities=25% Similarity=0.412 Sum_probs=29.8
Q ss_pred cccccCCCccCCCceEE-cCCCceeChhhHHHhh----hcCCCCCccccc
Q 018193 307 ECCICLSSYEDGTELHA-LPCNHHFHSTCIVKWL----KMNATCPLCKYN 351 (359)
Q Consensus 307 ~C~ICL~~~~~~~~lr~-LpC~H~FH~~CId~WL----~~~~tCPlCR~~ 351 (359)
.| ||...+++++.+.. -.|...||..|+..=. ...-.||.|+..
T Consensus 18 ~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~ 66 (72)
T d1weea_ 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred Ee-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCc
Confidence 35 89887777664333 3499999999986422 123479999754
No 27
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.06 E-value=0.39 Score=33.72 Aligned_cols=46 Identities=24% Similarity=0.535 Sum_probs=29.9
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHH----Hh--h---hcCCCCCccccc
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIV----KW--L---KMNATCPLCKYN 351 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId----~W--L---~~~~tCPlCR~~ 351 (359)
...| ||-..+.+++.+.-=.|.=.||..|+. .- . ..+-.||.|+..
T Consensus 16 ~~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~ 70 (76)
T d1wema_ 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred cCEE-ECCCccCCCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCcCc
Confidence 3446 898877655444433489999999983 11 1 224589999754
No 28
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=83.95 E-value=0.47 Score=33.70 Aligned_cols=45 Identities=20% Similarity=0.525 Sum_probs=29.8
Q ss_pred ccccccCCCccCCCceEEc---CCCceeChhhHHH----hhh-----cCCCCCcccccc
Q 018193 306 AECCICLSSYEDGTELHAL---PCNHHFHSTCIVK----WLK-----MNATCPLCKYNI 352 (359)
Q Consensus 306 ~~C~ICL~~~~~~~~lr~L---pC~H~FH~~CId~----WL~-----~~~tCPlCR~~I 352 (359)
..| ||-....++..+ .. .|...||..|+.- .-. .+-.||.|+..-
T Consensus 17 ~~C-~C~~~~~~~~~i-~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T d1wewa_ 17 VRC-VCGNSLETDSMI-QCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCC-SSCCCCCCSCEE-ECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred cEe-ECCCccCCCcEE-EEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCcC
Confidence 345 999887765444 45 3999999999842 111 124799997543
No 29
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.05 E-value=1.5 Score=25.68 Aligned_cols=28 Identities=18% Similarity=0.403 Sum_probs=23.1
Q ss_pred cccccCCCccCCCceEEcCCCceeChhhH
Q 018193 307 ECCICLSSYEDGTELHALPCNHHFHSTCI 335 (359)
Q Consensus 307 ~C~ICL~~~~~~~~lr~LpC~H~FH~~CI 335 (359)
.|+-|...+...|-++.- =+++||.+|.
T Consensus 4 ~Ca~C~~~I~~~e~VmRA-~~~VyHl~CF 31 (31)
T d1rutx3 4 ACSACGQSIPASELVMRA-QGNVYHLKCF 31 (31)
T ss_dssp ECTTTCCEECTTSEEEEE-TTEEECGGGC
T ss_pred ccccccCcCChhHhheec-ccceeeeccC
Confidence 599999999998877654 4799999983
No 30
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=57.36 E-value=1.2 Score=28.93 Aligned_cols=39 Identities=28% Similarity=0.690 Sum_probs=22.7
Q ss_pred cccccCCCccCCCceEEcC---C-CceeChhhHHHhhhcCC----CCCcccc
Q 018193 307 ECCICLSSYEDGTELHALP---C-NHHFHSTCIVKWLKMNA----TCPLCKY 350 (359)
Q Consensus 307 ~C~ICL~~~~~~~~lr~Lp---C-~H~FH~~CId~WL~~~~----tCPlCR~ 350 (359)
-| ||.... +++ ...-- | .-.||..|+. |.... .||.|+.
T Consensus 4 yC-~C~~~~-~~~-mi~Cd~~~C~~~WfH~~Cvg--l~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 4 YC-LCHQVS-YGE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp ET-TTTEEC-CSE-EEECSCTTCSSCEEEGGGGT--CSSCCSSCCCCHHHHC
T ss_pred EE-EcCCCC-CCC-EEEEecCCCCCCCEeCCccC--CCcCCCCcEECcCCCC
Confidence 36 787654 233 22222 3 4579999996 33322 5998875
No 31
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.30 E-value=2.4 Score=28.49 Aligned_cols=43 Identities=21% Similarity=0.504 Sum_probs=29.1
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhhHHHhhh-cCCCCCcc
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTCIVKWLK-MNATCPLC 348 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~CId~WL~-~~~tCPlC 348 (359)
...|--|...+.+....+--.|+++|+.+| |-... .-..||-|
T Consensus 15 ~~~C~gC~~~l~~~~~y~C~~C~~~FC~dC-D~fiHe~lh~CpgC 58 (59)
T d1z60a1 15 ERFCYGCQGELKDQHVYVCAVCQNVFCVDC-DVFVHDSLHSCPGC 58 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTCCBCHHH-HHTTTTTSCSSSTT
T ss_pred CCCccCCCCcCCCCceEECcCCCCcccccc-chhhhhhhcCCCCC
Confidence 456888988886553333334999999999 44443 33479988
No 32
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=41.19 E-value=19 Score=25.72 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=34.4
Q ss_pred CCCccccccCCCccC---CCceEEc-CCCceeChhhHHHhh-hcCCCCCccccccc
Q 018193 303 PEDAECCICLSSYED---GTELHAL-PCNHHFHSTCIVKWL-KMNATCPLCKYNIL 353 (359)
Q Consensus 303 ~~~~~C~ICL~~~~~---~~~lr~L-pC~H~FH~~CId~WL-~~~~tCPlCR~~I~ 353 (359)
-+...|-||=+++.. ++....- -|+--.+..|.+-=. .-++.||-|+....
T Consensus 14 ~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Yk 69 (93)
T d1weoa_ 14 LDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp CSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred cccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhh
Confidence 345689999998853 3322211 277778899987544 34778999987653
No 33
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.96 E-value=2.4 Score=27.52 Aligned_cols=44 Identities=23% Similarity=0.518 Sum_probs=27.5
Q ss_pred cccccCCCccCCCceEE-cCCCceeChhhHHHhhhcCCCCCcccc
Q 018193 307 ECCICLSSYEDGTELHA-LPCNHHFHSTCIVKWLKMNATCPLCKY 350 (359)
Q Consensus 307 ~C~ICL~~~~~~~~lr~-LpC~H~FH~~CId~WL~~~~tCPlCR~ 350 (359)
.|.+|-..|..-..-.. -.||++|+..|..+.-+..-.|..|..
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C~~ 46 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 46 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhHhh
Confidence 48888888875432222 249999999998765444456777753
No 34
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.56 E-value=12 Score=21.93 Aligned_cols=30 Identities=17% Similarity=0.483 Sum_probs=23.6
Q ss_pred CCccccccCCCccCCCceEEcCCCceeChhh
Q 018193 304 EDAECCICLSSYEDGTELHALPCNHHFHSTC 334 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~~lr~LpC~H~FH~~C 334 (359)
....|.-|-+.|+..+++.-- =|-.+|.+|
T Consensus 6 ~~~~C~RC~~gF~p~EkiVNS-nGEl~H~qC 35 (35)
T d1g47a1 6 ASATCERCKGGFAPAEKIVNS-NGELYHEQC 35 (35)
T ss_dssp CCCBCSSSCCBCCSTTTCEEE-TTEEECTTT
T ss_pred HHHHHHHHccCCCchHHhhcC-CCccccccC
Confidence 457899999999998876542 467888887
No 35
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=37.36 E-value=12 Score=25.65 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=25.3
Q ss_pred CCccccccCCCccCCCce-EEcCCCceeChhhHHHhh
Q 018193 304 EDAECCICLSSYEDGTEL-HALPCNHHFHSTCIVKWL 339 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~~l-r~LpC~H~FH~~CId~WL 339 (359)
++..|.+|-..|.--..- .--.||++|+..|....+
T Consensus 12 ~~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~~~ 48 (72)
T d1dvpa2 12 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQC 48 (72)
T ss_dssp CCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEE
T ss_pred cCCccccCCCcccCccccccccccCCeeChhhhCCce
Confidence 345799999999653321 222499999999987654
No 36
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=36.47 E-value=9.8 Score=28.75 Aligned_cols=31 Identities=13% Similarity=0.363 Sum_probs=22.6
Q ss_pred CccccccCCCccC--CCceEEcCCCceeChhhH
Q 018193 305 DAECCICLSSYED--GTELHALPCNHHFHSTCI 335 (359)
Q Consensus 305 ~~~C~ICL~~~~~--~~~lr~LpC~H~FH~~CI 335 (359)
...|.+|...|.. +....-..|++.||..|-
T Consensus 48 ~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~ 80 (124)
T d1zbdb_ 48 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 80 (124)
T ss_dssp SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence 4579999999863 222334459999999995
No 37
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.63 E-value=1.7 Score=25.62 Aligned_cols=26 Identities=38% Similarity=0.970 Sum_probs=18.2
Q ss_pred cccccCCCccCCC--ceEEcC-CCceeCh
Q 018193 307 ECCICLSSYEDGT--ELHALP-CNHHFHS 332 (359)
Q Consensus 307 ~C~ICL~~~~~~~--~lr~Lp-C~H~FH~ 332 (359)
+|.-|...|+.++ +.--.| |..+||.
T Consensus 1 VC~~C~~PF~~~~Fy~~~g~PyCe~HyH~ 29 (32)
T d1x3ha2 1 VCGDCFTSFSTGSFFELDGRPFCELHYHH 29 (32)
T ss_dssp BCSSSCCBSCSSCCEESSSCEECHHHHHH
T ss_pred CcCccCCcCCCCCeEeECCccchHHhhhh
Confidence 4888999998765 222235 9988885
No 38
>d1xioa_ f.13.1.1 (A:) Sensory rhodopsin {Anabaena sp. PCC 7120 [TaxId: 103690]}
Probab=33.23 E-value=15 Score=30.59 Aligned_cols=106 Identities=13% Similarity=0.350 Sum_probs=61.3
Q ss_pred HHHH-HHHhcCCCcccceehhHHHHHH-----------HH-HHHHhhhhhcc-cCC-CCCccchhhhhHhhhhHHHHHHH
Q 018193 58 AREL-EERRADWGYSKPVVALDIMWNS-----------AF-VIVSAAMLIIT-INE-RPSTRIRLWICGYALQCLVHVVL 122 (359)
Q Consensus 58 ~~~~-~~r~~~w~~s~~~v~l~l~~nl-----------~~-iva~i~vL~ls-~~E-~p~~PL~~Wi~gY~~~c~~~~~~ 122 (359)
.+|. .-|-.||.-.-|.+.+++.+.. .. ++++++|+..- --| .+. +- ...+.|+++|+.-+.+
T Consensus 65 ~~~v~~~RYiDW~lTtPlll~~l~l~~~~~~~~~~~~~~~li~~~~~Mi~~G~~g~~~~~-~~-~~~~~f~~~~~~f~~i 142 (226)
T d1xioa_ 65 GQIAHYARYIDWMVTTPLLLLSLSWTAMQFIKKDWTLIGFLMSTQIVVITSGLIADLSER-DW-VRYLWYICGVCAFLII 142 (226)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHCSS-HH-HHHHHHHHHHHHHHHH
T ss_pred CceeeHHHHHHHHHcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHhcccc-hH-HHHHHHHHHHHHHHHH
Confidence 3444 4499999999999999998664 11 33444443331 112 111 11 1234678888877777
Q ss_pred HHhHhhhhhcccCCCccCCCCCCCCCCCCCCCcccccccccccccchhhhhhHHHHHHHHHHHHhhceEEEe
Q 018193 123 VWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194 (359)
Q Consensus 123 ~~~~yr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~f~~vWfvvG~~wv~ 194 (359)
+|.-+....+...+. .....+.+..+..++.++|.+.+..|..
T Consensus 143 ~y~l~~~~~~~~~~~-----------------------------~~~~~~~~~~l~~~~~v~W~~YPi~~~l 185 (226)
T d1xioa_ 143 LWGIWNPLRAKTRTQ-----------------------------SSELANLYDKLVTYFTVLWIGYPIVWII 185 (226)
T ss_dssp HHHHHTHHHHHHTTS-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc-----------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 765443322211000 0123445566667888999999999998
No 39
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.34 E-value=8.5 Score=22.80 Aligned_cols=26 Identities=15% Similarity=0.381 Sum_probs=20.2
Q ss_pred ccccccCCCccCCCceEEcCCCceeChhh
Q 018193 306 AECCICLSSYEDGTELHALPCNHHFHSTC 334 (359)
Q Consensus 306 ~~C~ICL~~~~~~~~lr~LpC~H~FH~~C 334 (359)
..|.-|-..+.+. .....+..||.+|
T Consensus 9 pkC~~C~~~I~g~---~v~Al~~~wHpeC 34 (35)
T d1x3ha1 9 PKCGGCNRPVLEN---YLSAMDTVWHPEC 34 (35)
T ss_dssp CBCTTTCCBCCSS---CEEETTEEECTTT
T ss_pred hhhhhcCCcccch---heeecCCccCccc
Confidence 4699999998765 3445789999998
No 40
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.81 E-value=8.1 Score=22.97 Aligned_cols=25 Identities=24% Similarity=0.639 Sum_probs=19.9
Q ss_pred ccccccCCCccCCCceEEcC-CCceeChhh
Q 018193 306 AECCICLSSYEDGTELHALP-CNHHFHSTC 334 (359)
Q Consensus 306 ~~C~ICL~~~~~~~~lr~Lp-C~H~FH~~C 334 (359)
+.|.+|-..+-+ +.|. .|-.||..|
T Consensus 9 EkC~~C~~~I~d----riLrA~Gk~yHP~C 34 (35)
T d2dloa1 9 EKCATCSQPILD----RILRAMGKAYHPGC 34 (35)
T ss_dssp CBCTTTCCBCCS----CCEEETTEEECTTT
T ss_pred HHHHHhchHHHH----HHHHHhCCCCCCCC
Confidence 469999988877 3554 889999888
No 41
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.29 E-value=30 Score=23.73 Aligned_cols=35 Identities=29% Similarity=0.491 Sum_probs=27.6
Q ss_pred ccccccCCCccCCCceEEcC--CCceeChhhHHHhhhc
Q 018193 306 AECCICLSSYEDGTELHALP--CNHHFHSTCIVKWLKM 341 (359)
Q Consensus 306 ~~C~ICL~~~~~~~~lr~Lp--C~H~FH~~CId~WL~~ 341 (359)
..|.+|-+.++|.. ..+-| =+|.|+..|-..-++.
T Consensus 9 l~CtlC~erLEdtH-FVQCPsv~~HkFCFpCsr~sik~ 45 (80)
T d2cs3a1 9 LCCTICHERLEDTH-FVQCPSVPSHKFCFPCSRESIKA 45 (80)
T ss_dssp CCCSSSCSCCSSTT-SEECSSCSSCEECHHHHHHHHHH
T ss_pred eeeeeehhhhcCCc-eEeCCCCcCCceeccccHHHHHh
Confidence 57999999998864 34444 3699999999999875
No 42
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.50 E-value=12 Score=22.96 Aligned_cols=27 Identities=22% Similarity=0.589 Sum_probs=18.5
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhh
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTC 334 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~C 334 (359)
...|..|-+-+ .++.+.. =+|.||.+|
T Consensus 15 G~~C~~C~~~I-tG~V~~A--g~~~yHP~C 41 (41)
T d1v6ga1 15 GTRCFSCDQFI-EGEVVSA--LGKTYHPDC 41 (41)
T ss_dssp CCBCTTTCCBC-CSCCEEE--TTEEECTTT
T ss_pred CcccccccCEe-eeeeeEe--cCcccCCCC
Confidence 45799997766 4543333 359999988
No 43
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=29.15 E-value=19 Score=21.33 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=12.2
Q ss_pred CCceeChhhHHHhhhcCCCCCccccc
Q 018193 326 CNHHFHSTCIVKWLKMNATCPLCKYN 351 (359)
Q Consensus 326 C~H~FH~~CId~WL~~~~tCPlCR~~ 351 (359)
|||++-.+ --..||+|.++
T Consensus 11 CGyi~~g~-------~Pe~CPvCg~~ 29 (36)
T d1yuza2 11 CGYIHKGE-------DFEKCPICFRP 29 (36)
T ss_dssp SCCEEESS-------CCSBCTTTCCB
T ss_pred CCCEeeCC-------CCCcCCCCCCc
Confidence 88876531 13469999764
No 44
>d1rutx4 g.39.1.3 (X:114-146) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.19 E-value=11 Score=21.69 Aligned_cols=13 Identities=31% Similarity=0.999 Sum_probs=10.6
Q ss_pred CCCcccccccCCC
Q 018193 344 TCPLCKYNILKGN 356 (359)
Q Consensus 344 tCPlCR~~I~~~~ 356 (359)
||-.||..+.+||
T Consensus 1 tC~tC~n~LVPGD 13 (33)
T d1rutx4 1 TCSTCRNRLVPGD 13 (33)
T ss_dssp BCTTTCCBCCTTC
T ss_pred CcccccccccCCc
Confidence 5888888888876
No 45
>d1rqga3 g.41.1.1 (A:139-173) Methionyl-tRNA synthetase (MetRS), Zn-domain {Pyrococcus abyssi [TaxId: 29292]}
Probab=27.81 E-value=13 Score=21.99 Aligned_cols=15 Identities=40% Similarity=0.778 Sum_probs=10.5
Q ss_pred CCCCCcccccccCCC
Q 018193 342 NATCPLCKYNILKGN 356 (359)
Q Consensus 342 ~~tCPlCR~~I~~~~ 356 (359)
..+||.|.++--.||
T Consensus 2 ~G~CP~C~~~~a~GD 16 (35)
T d1rqga3 2 IGTCPYCGAEDQKGD 16 (35)
T ss_dssp CSBCSSSCCSCCCTT
T ss_pred eEECCCCCCCcccCc
Confidence 468999987655554
No 46
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.39 E-value=24 Score=23.48 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=23.9
Q ss_pred ccccccCCCccCCCceEEc-CCCceeChhhHHHhh
Q 018193 306 AECCICLSSYEDGTELHAL-PCNHHFHSTCIVKWL 339 (359)
Q Consensus 306 ~~C~ICL~~~~~~~~lr~L-pC~H~FH~~CId~WL 339 (359)
..|.+|-..|.--..-.-= .||.+|+..|....+
T Consensus 6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~ 40 (67)
T d1vfya_ 6 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSI 40 (67)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEE
T ss_pred cccccCCCcccCcccccccccCCCEecccccCCcE
Confidence 4699999998643221111 499999999987664
No 47
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=27.23 E-value=9.5 Score=26.73 Aligned_cols=11 Identities=27% Similarity=1.120 Sum_probs=10.1
Q ss_pred eChhhHHHhhh
Q 018193 330 FHSTCIVKWLK 340 (359)
Q Consensus 330 FH~~CId~WL~ 340 (359)
||..|+.+|+.
T Consensus 40 FCRNCLskWy~ 50 (79)
T d2o35a1 40 FCRNCLSNWYR 50 (79)
T ss_dssp CCHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 48
>d2jnya1 b.171.1.1 (A:1-59) Uncharacterized protein Cgl1405/cg1592 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=26.58 E-value=7.1 Score=25.95 Aligned_cols=18 Identities=22% Similarity=0.069 Sum_probs=11.5
Q ss_pred HHhhhcCCCCCccccccc
Q 018193 336 VKWLKMNATCPLCKYNIL 353 (359)
Q Consensus 336 d~WL~~~~tCPlCR~~I~ 353 (359)
+++|..--.||.||.++.
T Consensus 4 ~~~LL~iL~CP~ck~~L~ 21 (59)
T d2jnya1 4 DPQLLEVLACPKDKGPLR 21 (59)
T ss_dssp CGGGTCCCBCTTTCCBCE
T ss_pred CHHHHHHhcCCCCCCEeE
Confidence 455555566777777664
No 49
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.94 E-value=21 Score=20.78 Aligned_cols=27 Identities=15% Similarity=0.358 Sum_probs=18.3
Q ss_pred CccccccCCCccCCCceEEcCCCceeChhh
Q 018193 305 DAECCICLSSYEDGTELHALPCNHHFHSTC 334 (359)
Q Consensus 305 ~~~C~ICL~~~~~~~~lr~LpC~H~FH~~C 334 (359)
...|-.|-.-+... ....=.|.||.+|
T Consensus 8 ge~C~~C~~~itGp---vMvAG~~K~HPEC 34 (34)
T d1x6aa1 8 GEFCHGCSLLMTGP---FMVAGEFKYHPEC 34 (34)
T ss_dssp SCBCTTTCCBCCSC---CBCCTTCCBCTTS
T ss_pred HHHhhhhHhhcccc---eeeecccccCCCC
Confidence 45688998865533 2233569999988
No 50
>d1uaza_ f.13.1.1 (A:) Archaerhodopsin-1 {Archaeon Halobacterium sp. [TaxId: 2243]}
Probab=25.18 E-value=15 Score=30.99 Aligned_cols=101 Identities=16% Similarity=0.358 Sum_probs=60.4
Q ss_pred HhcCCCcccceehhHHHHHHH--------HHHHHhhhhhcc-cCCCCCccchhhhhHhhhhHHHHHHHHHhHhhhhhccc
Q 018193 64 RRADWGYSKPVVALDIMWNSA--------FVIVSAAMLIIT-INERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134 (359)
Q Consensus 64 r~~~w~~s~~~v~l~l~~nl~--------~iva~i~vL~ls-~~E~p~~PL~~Wi~gY~~~c~~~~~~~~~~yr~r~~~~ 134 (359)
|-.||.-.-|.+.+|+..... -+++.++|+..- -.|-=..+..- .+.|+++|+.-+.++|.-+.......
T Consensus 88 RYiDW~lTtPLll~~l~ll~~~~~~~~~~li~a~~~Miv~G~~ge~~~~~~~~-~~~~~~~~~~~~~i~y~l~~~~~~~~ 166 (236)
T d1uaza_ 88 RYADWLFTTPLLLLDLALLAKVDRVSIGTLVGVDALMIVTGLVGALSHTPLAR-YTWWLFSTICMIVVLYFLATSLRAAA 166 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTCSSHHHH-HHHHHHHHHHHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHhcCcchh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999899999998865321 133444444332 12322223323 35688888888887776554432211
Q ss_pred CCCccCCCCCCCCCCCCCCCcccccccccccccchhhhhhHHHHHHHHHHHHhhceEEEe
Q 018193 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194 (359)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~f~~vWfvvG~~wv~ 194 (359)
.+. ...+.+-++.+..++.+.|.+.+..|..
T Consensus 167 ~~~-----------------------------~~~~~~~~~~l~~~~~v~W~iYPi~~~l 197 (236)
T d1uaza_ 167 KER-----------------------------GPEVASTFNTLTALVLVLWTAYPILWII 197 (236)
T ss_dssp TSS-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcC-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 0123445666777888899999999987
No 51
>d2d8va1 g.43.1.1 (A:8-61) Zinc finger FYVE domain-containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.64 E-value=25 Score=22.74 Aligned_cols=26 Identities=27% Similarity=0.866 Sum_probs=20.1
Q ss_pred ccccCCCccCCCceEEcCCC-ceeChhhHHH
Q 018193 308 CCICLSSYEDGTELHALPCN-HHFHSTCIVK 337 (359)
Q Consensus 308 C~ICL~~~~~~~~lr~LpC~-H~FH~~CId~ 337 (359)
|+||.++ ..+|-+-|. -.|+..|-.+
T Consensus 4 C~ICneD----A~lrC~gCdgdLyC~rC~rE 30 (54)
T d2d8va1 4 CCICNED----ATLRCAGCDGDLYCARCFRE 30 (54)
T ss_dssp CTTTCSC----CCEEETTTTSEEECSSHHHH
T ss_pred eEEecCC----CceEecCCCCceehHHHHHH
Confidence 8999775 567888885 8899888554
No 52
>d1e12a_ f.13.1.1 (A:) Halorhodopsin {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=22.83 E-value=31 Score=28.77 Aligned_cols=99 Identities=17% Similarity=0.347 Sum_probs=60.7
Q ss_pred HhcCCCcccceehhHHHHHH--------HHHHHHhhhhhcc-cCC-CCCccchhhhhHhhhhHHHHHHHHHhHhhhhhcc
Q 018193 64 RRADWGYSKPVVALDIMWNS--------AFVIVSAAMLIIT-INE-RPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR 133 (359)
Q Consensus 64 r~~~w~~s~~~v~l~l~~nl--------~~iva~i~vL~ls-~~E-~p~~PL~~Wi~gY~~~c~~~~~~~~~~yr~r~~~ 133 (359)
|-.||--.-|.+.+|+.+.. ..++++.+|+..- -.| .+.....-| +.|+++|+.-+.++|.-+......
T Consensus 85 RYiDW~lTtPLll~~l~l~~~~~~~~~~~li~a~~~Miv~G~~ge~~~~~~~~~w-~~~~i~~~~~~~i~y~l~~~~~~~ 163 (239)
T d1e12a_ 85 RYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLFRW-AFYAISCAFFVVVLSALVTDWAAS 163 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCSCHHHHH-HHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHhcccHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHccCchhHHH-HHHHHHHHHHHHHHHHHhccchhh
Confidence 89999999999999987642 1234445444442 123 222212234 677889988888888766554331
Q ss_pred cCCCccCCCCCCCCCCCCCCCcccccccccccccchhhhhhHHHHHHHHHHHHhhceEEEe
Q 018193 134 RVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194 (359)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~f~~vWfvvG~~wv~ 194 (359)
. ++ ....+.++.+..++.+.|.+....|..
T Consensus 164 ~-~~------------------------------~~~~~~~~~l~~~~~v~W~iYPi~~~l 193 (239)
T d1e12a_ 164 A-SS------------------------------AGTAEIFDTLRVLTVVLWLGYPIVWAV 193 (239)
T ss_dssp H-HH------------------------------HTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-hh------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00 011233455556788899999999987
No 53
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.27 E-value=30 Score=22.68 Aligned_cols=34 Identities=21% Similarity=0.461 Sum_probs=23.9
Q ss_pred ccccccCCCccCCCceEEc-CCCceeChhhHHHhh
Q 018193 306 AECCICLSSYEDGTELHAL-PCNHHFHSTCIVKWL 339 (359)
Q Consensus 306 ~~C~ICL~~~~~~~~lr~L-pC~H~FH~~CId~WL 339 (359)
..|.+|-..|.--..-.-= .||++|+..|.....
T Consensus 9 ~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~~~ 43 (64)
T d1joca1 9 QNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNA 43 (64)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred CcCcCcCCcccCCccccchhhhCCeecccccCCce
Confidence 4699999998654321112 399999999977654
No 54
>d2pk7a1 b.171.1.1 (A:3-61) Uncharacterized protein PFL1779 {Pseudomonas fluorescens [TaxId: 294]}
Probab=20.99 E-value=14 Score=24.38 Aligned_cols=13 Identities=31% Similarity=0.772 Sum_probs=10.0
Q ss_pred CCCCcccccccCC
Q 018193 343 ATCPLCKYNILKG 355 (359)
Q Consensus 343 ~tCPlCR~~I~~~ 355 (359)
-.||.||.++...
T Consensus 7 L~CP~ck~~L~~~ 19 (59)
T d2pk7a1 7 LACPICKGPLKLS 19 (59)
T ss_dssp CCCTTTCCCCEEC
T ss_pred eECCCCCCcceEe
Confidence 4699999988543
No 55
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=20.67 E-value=22 Score=22.10 Aligned_cols=24 Identities=21% Similarity=0.429 Sum_probs=15.6
Q ss_pred EEcCCCceeChhhHHHhhhcCCCCCccccc
Q 018193 322 HALPCNHHFHSTCIVKWLKMNATCPLCKYN 351 (359)
Q Consensus 322 r~LpC~H~FH~~CId~WL~~~~tCPlCR~~ 351 (359)
+-+.|||++..+ .--..||+|.++
T Consensus 10 ~C~~CGyi~~g~------~aP~~CPvC~~p 33 (44)
T d1lkoa2 10 RCRNCGYVHEGT------GAPELCPACAHP 33 (44)
T ss_dssp EETTTCCEEEEE------ECCSBCTTTCCB
T ss_pred EcCCCCcEEECC------CCCCcCCCCCCc
Confidence 345699988642 123479999874
No 56
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.01 E-value=30 Score=20.51 Aligned_cols=29 Identities=21% Similarity=0.406 Sum_probs=18.4
Q ss_pred CCccccccCCCccCCCceEEcCCCceeChhh
Q 018193 304 EDAECCICLSSYEDGTELHALPCNHHFHSTC 334 (359)
Q Consensus 304 ~~~~C~ICL~~~~~~~~lr~LpC~H~FH~~C 334 (359)
..+.|.+|-...=.-| +...=++.||+.|
T Consensus 7 ~~~~C~~C~K~VY~~E--rl~a~g~~yHk~C 35 (36)
T d2co8a2 7 AGDLCALCGEHLYVLE--RLCVNGHFFHRSC 35 (36)
T ss_dssp SSCBCSSSCCBCCTTT--BCCBTTBCCBTTT
T ss_pred CCCcccccCCEEeeee--EEEecCcEecccc
Confidence 3467999976543322 2223479999998
Done!