Query 018194
Match_columns 359
No_of_seqs 512 out of 4206
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 11:24:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bus_A REBM, methyltransferase 100.0 2E-29 7E-34 224.4 28.6 210 69-281 5-217 (273)
2 2o57_A Putative sarcosine dime 100.0 6.7E-30 2.3E-34 230.4 25.0 209 67-281 17-235 (297)
3 3hem_A Cyclopropane-fatty-acyl 100.0 6.9E-29 2.4E-33 224.3 25.5 264 65-343 12-297 (302)
4 1kpg_A CFA synthase;, cyclopro 100.0 1E-27 3.6E-32 214.9 28.4 209 67-281 6-229 (287)
5 2fk8_A Methoxy mycolic acid sy 100.0 2E-27 6.8E-32 216.3 24.9 211 65-281 30-255 (318)
6 1vl5_A Unknown conserved prote 99.9 1.8E-25 6.3E-30 197.4 18.7 166 111-281 26-191 (260)
7 3vc1_A Geranyl diphosphate 2-C 99.9 4.2E-26 1.4E-30 206.9 14.8 230 44-281 38-270 (312)
8 3kkz_A Uncharacterized protein 99.9 2.4E-24 8.1E-29 191.0 25.5 162 112-281 35-197 (267)
9 3ujc_A Phosphoethanolamine N-m 99.9 1.3E-24 4.5E-29 192.3 22.8 164 109-281 42-207 (266)
10 3f4k_A Putative methyltransfer 99.9 2.3E-24 7.9E-29 189.9 23.1 162 112-281 35-197 (257)
11 1nkv_A Hypothetical protein YJ 99.9 5E-24 1.7E-28 187.6 23.8 165 109-280 23-187 (256)
12 2yqz_A Hypothetical protein TT 99.9 3.8E-25 1.3E-29 195.5 15.3 157 119-280 36-196 (263)
13 3mgg_A Methyltransferase; NYSG 99.9 2.4E-24 8.1E-29 191.9 18.9 244 108-354 23-271 (276)
14 3ccf_A Cyclopropane-fatty-acyl 99.9 3.5E-24 1.2E-28 191.2 17.8 224 113-354 48-279 (279)
15 4htf_A S-adenosylmethionine-de 99.9 7.3E-24 2.5E-28 189.7 19.9 168 112-281 59-233 (285)
16 3ege_A Putative methyltransfer 99.9 2.6E-24 9E-29 190.1 16.7 209 109-335 21-232 (261)
17 1xxl_A YCGJ protein; structura 99.9 4.2E-23 1.5E-27 179.9 19.2 163 111-281 10-175 (239)
18 4gek_A TRNA (CMO5U34)-methyltr 99.9 4.3E-23 1.5E-27 181.7 18.5 155 120-277 68-242 (261)
19 2p35_A Trans-aconitate 2-methy 99.9 5.6E-23 1.9E-27 181.2 18.5 156 112-276 23-186 (259)
20 3bkx_A SAM-dependent methyltra 99.9 8.9E-22 3.1E-26 175.1 24.3 180 102-281 23-220 (275)
21 3dlc_A Putative S-adenosyl-L-m 99.9 4.8E-23 1.7E-27 176.7 14.5 169 108-280 30-203 (219)
22 3dh0_A SAM dependent methyltra 99.9 2.1E-22 7.2E-27 172.9 18.2 154 112-281 27-182 (219)
23 2p7i_A Hypothetical protein; p 99.9 2.6E-22 9E-27 175.5 19.0 152 121-284 41-203 (250)
24 3dtn_A Putative methyltransfer 99.9 2.7E-22 9.1E-27 174.2 18.9 164 112-280 33-214 (234)
25 3h2b_A SAM-dependent methyltra 99.9 4.3E-23 1.5E-27 175.2 13.1 180 71-282 3-184 (203)
26 3l8d_A Methyltransferase; stru 99.9 6.2E-22 2.1E-26 172.6 17.9 157 112-281 45-201 (242)
27 3g5t_A Trans-aconitate 3-methy 99.9 1.2E-21 4.1E-26 176.5 20.0 165 112-280 27-209 (299)
28 4fsd_A Arsenic methyltransfera 99.9 2.9E-22 9.9E-27 186.6 16.0 155 120-279 81-250 (383)
29 3gu3_A Methyltransferase; alph 99.9 1.5E-21 5.1E-26 174.6 19.5 217 118-338 18-257 (284)
30 2ex4_A Adrenal gland protein A 99.9 5.6E-22 1.9E-26 173.0 15.3 147 121-281 78-226 (241)
31 3hnr_A Probable methyltransfer 99.9 2.9E-22 1E-26 172.2 12.9 155 114-280 37-201 (220)
32 3ou2_A SAM-dependent methyltra 99.9 8.3E-22 2.8E-26 168.9 15.8 158 113-279 36-204 (218)
33 3ocj_A Putative exported prote 99.9 1.2E-21 4.1E-26 176.9 17.5 161 119-280 115-291 (305)
34 1xtp_A LMAJ004091AAA; SGPP, st 99.9 1.3E-21 4.6E-26 171.8 17.1 162 105-281 76-239 (254)
35 3dli_A Methyltransferase; PSI- 99.9 1.8E-21 6E-26 169.7 17.2 144 120-282 39-186 (240)
36 4hg2_A Methyltransferase type 99.9 2E-22 7E-27 176.7 10.0 110 110-230 29-138 (257)
37 1pjz_A Thiopurine S-methyltran 99.9 9.9E-22 3.4E-26 166.8 13.7 151 116-284 16-180 (203)
38 3fpf_A Mtnas, putative unchara 99.9 1.7E-21 5.7E-26 171.8 15.2 157 64-227 60-222 (298)
39 3e23_A Uncharacterized protein 99.9 4E-21 1.4E-25 164.1 14.8 171 70-281 10-183 (211)
40 3sm3_A SAM-dependent methyltra 99.9 4.6E-21 1.6E-25 166.1 15.3 159 121-280 29-207 (235)
41 3g5l_A Putative S-adenosylmeth 99.9 3.5E-21 1.2E-25 169.1 14.1 166 112-281 34-217 (253)
42 3lcc_A Putative methyl chlorid 99.9 8.5E-21 2.9E-25 164.8 15.7 147 116-282 61-209 (235)
43 1ri5_A MRNA capping enzyme; me 99.9 1.7E-20 5.9E-25 168.6 17.6 161 120-280 62-250 (298)
44 3jwh_A HEN1; methyltransferase 99.8 1.4E-20 4.6E-25 161.5 14.6 161 111-277 18-189 (217)
45 1y8c_A S-adenosylmethionine-de 99.8 2.3E-20 8E-25 162.8 16.2 102 122-227 37-142 (246)
46 1x19_A CRTF-related protein; m 99.8 1.2E-19 4.2E-24 167.5 21.5 167 112-281 180-349 (359)
47 3i53_A O-methyltransferase; CO 99.8 7.6E-20 2.6E-24 167.1 19.8 158 114-280 161-321 (332)
48 3g2m_A PCZA361.24; SAM-depende 99.8 7.1E-21 2.4E-25 171.4 12.7 169 111-282 72-276 (299)
49 3jwg_A HEN1, methyltransferase 99.8 3.9E-20 1.3E-24 158.8 16.6 163 110-278 17-190 (219)
50 3gwz_A MMCR; methyltransferase 99.8 2.2E-19 7.6E-24 166.3 22.4 163 111-280 191-356 (369)
51 2aot_A HMT, histamine N-methyl 99.8 2.3E-20 7.7E-25 167.5 15.2 155 120-278 50-219 (292)
52 1vlm_A SAM-dependent methyltra 99.8 4.6E-20 1.6E-24 158.4 15.7 139 123-281 48-189 (219)
53 3bkw_A MLL3908 protein, S-aden 99.8 5.3E-20 1.8E-24 160.4 16.3 164 112-280 33-214 (243)
54 3cc8_A Putative methyltransfer 99.8 3.3E-19 1.1E-23 153.8 20.9 157 112-283 23-188 (230)
55 3e8s_A Putative SAM dependent 99.8 1.1E-20 3.7E-25 162.8 11.5 160 112-280 42-209 (227)
56 3i9f_A Putative type 11 methyl 99.8 2.1E-20 7.3E-25 153.9 12.5 141 114-281 9-149 (170)
57 2gs9_A Hypothetical protein TT 99.8 7.5E-20 2.6E-24 156.1 15.5 143 122-280 36-179 (211)
58 2xvm_A Tellurite resistance pr 99.8 1.3E-19 4.5E-24 152.9 16.6 149 113-280 23-173 (199)
59 2r3s_A Uncharacterized protein 99.8 1.6E-19 5.4E-24 165.2 17.8 166 112-281 153-324 (335)
60 3pfg_A N-methyltransferase; N, 99.8 2E-20 6.9E-25 165.2 11.4 117 104-230 34-154 (263)
61 2gb4_A Thiopurine S-methyltran 99.8 1.5E-19 5.2E-24 158.1 16.7 145 119-281 65-228 (252)
62 2avn_A Ubiquinone/menaquinone 99.8 4.1E-20 1.4E-24 163.0 13.0 161 110-283 44-216 (260)
63 2g72_A Phenylethanolamine N-me 99.8 2.6E-20 8.9E-25 166.9 10.9 149 121-281 70-257 (289)
64 1qzz_A RDMB, aclacinomycin-10- 99.8 3.1E-19 1.1E-23 165.8 18.3 164 112-281 172-340 (374)
65 3dp7_A SAM-dependent methyltra 99.8 1.4E-19 4.9E-24 167.2 15.9 157 121-279 178-341 (363)
66 2a14_A Indolethylamine N-methy 99.8 1.5E-20 5.2E-25 166.1 8.9 150 119-280 52-238 (263)
67 1ve3_A Hypothetical protein PH 99.8 2.3E-19 8E-24 154.6 15.0 169 107-281 25-216 (227)
68 2ip2_A Probable phenazine-spec 99.8 4.7E-19 1.6E-23 162.0 17.7 162 112-280 158-322 (334)
69 2p8j_A S-adenosylmethionine-de 99.8 5.8E-20 2E-24 156.5 9.5 159 120-280 21-183 (209)
70 1tw3_A COMT, carminomycin 4-O- 99.8 9.7E-19 3.3E-23 161.6 18.4 164 112-281 173-340 (360)
71 3mcz_A O-methyltransferase; ad 99.8 7.7E-19 2.6E-23 161.7 17.6 162 113-277 169-336 (352)
72 3lst_A CALO1 methyltransferase 99.8 5.5E-19 1.9E-23 162.4 16.3 159 112-279 174-335 (348)
73 3d2l_A SAM-dependent methyltra 99.8 8.2E-19 2.8E-23 152.8 16.1 110 110-226 23-136 (243)
74 3bxo_A N,N-dimethyltransferase 99.8 1.2E-19 4.2E-24 157.7 10.1 115 107-231 27-145 (239)
75 2kw5_A SLR1183 protein; struct 99.8 8.4E-19 2.9E-23 148.5 14.9 144 121-281 29-172 (202)
76 3g07_A 7SK snRNA methylphospha 99.8 1E-19 3.5E-24 163.2 9.1 160 122-290 46-279 (292)
77 3e05_A Precorrin-6Y C5,15-meth 99.8 6.5E-18 2.2E-22 143.3 19.6 139 110-280 28-167 (204)
78 3thr_A Glycine N-methyltransfe 99.8 1.8E-18 6.3E-23 155.0 16.9 118 110-228 45-176 (293)
79 3njr_A Precorrin-6Y methylase; 99.8 4E-18 1.4E-22 144.6 18.0 136 111-279 44-179 (204)
80 4e2x_A TCAB9; kijanose, tetron 99.8 1.3E-19 4.4E-24 170.7 9.1 165 103-281 88-254 (416)
81 2i62_A Nicotinamide N-methyltr 99.8 1.5E-18 5E-23 153.3 14.6 151 119-281 53-240 (265)
82 3m70_A Tellurite resistance pr 99.8 1.6E-18 5.4E-23 155.0 14.8 139 121-279 119-259 (286)
83 2vdw_A Vaccinia virus capping 99.8 2.2E-18 7.4E-23 154.8 15.5 160 121-280 47-246 (302)
84 3ggd_A SAM-dependent methyltra 99.8 1.5E-18 5.2E-23 151.4 13.4 152 120-282 54-221 (245)
85 3reo_A (ISO)eugenol O-methyltr 99.8 4.6E-18 1.6E-22 157.3 17.1 157 112-281 192-356 (368)
86 3p9c_A Caffeic acid O-methyltr 99.8 6.6E-18 2.3E-22 155.9 18.0 156 112-280 190-353 (364)
87 4a6d_A Hydroxyindole O-methylt 99.8 1.3E-17 4.6E-22 153.3 19.9 162 112-280 169-334 (353)
88 3hm2_A Precorrin-6Y C5,15-meth 99.8 6E-18 2.1E-22 140.1 15.3 137 109-278 12-151 (178)
89 2qe6_A Uncharacterized protein 99.8 1.3E-17 4.3E-22 147.9 17.8 158 109-276 63-238 (274)
90 3ofk_A Nodulation protein S; N 99.8 3.1E-18 1E-22 146.6 12.9 115 109-228 38-155 (216)
91 1zx0_A Guanidinoacetate N-meth 99.8 7E-19 2.4E-23 152.8 8.7 107 120-228 58-171 (236)
92 3cgg_A SAM-dependent methyltra 99.8 1.3E-17 4.6E-22 139.8 15.9 129 120-280 44-175 (195)
93 3grz_A L11 mtase, ribosomal pr 99.8 5.4E-18 1.8E-22 143.9 13.4 138 108-280 48-185 (205)
94 4df3_A Fibrillarin-like rRNA/T 99.8 7.9E-18 2.7E-22 144.0 14.4 143 116-281 71-218 (233)
95 3orh_A Guanidinoacetate N-meth 99.8 2.1E-19 7.2E-24 156.0 4.3 105 121-227 59-170 (236)
96 3mti_A RRNA methylase; SAM-dep 99.8 4.8E-18 1.6E-22 141.7 12.4 143 119-282 19-171 (185)
97 1fp1_D Isoliquiritigenin 2'-O- 99.8 6.9E-18 2.4E-22 156.5 14.0 155 112-280 198-360 (372)
98 1xdz_A Methyltransferase GIDB; 99.8 2.6E-17 8.7E-22 143.3 16.3 133 119-281 67-203 (240)
99 3giw_A Protein of unknown func 99.8 8.8E-18 3E-22 146.4 13.2 164 106-276 61-243 (277)
100 3uwp_A Histone-lysine N-methyl 99.7 1E-17 3.6E-22 152.9 14.1 130 104-234 155-295 (438)
101 3m33_A Uncharacterized protein 99.7 1.3E-17 4.3E-22 143.9 13.6 119 121-280 47-167 (226)
102 2zfu_A Nucleomethylin, cerebra 99.7 1.4E-17 5E-22 142.3 13.9 114 120-279 65-178 (215)
103 3evz_A Methyltransferase; NYSG 99.7 2.1E-16 7.1E-21 136.5 20.5 133 119-279 52-205 (230)
104 3mq2_A 16S rRNA methyltransfer 99.7 5.5E-18 1.9E-22 145.2 10.4 152 116-281 21-185 (218)
105 1fbn_A MJ fibrillarin homologu 99.7 5.4E-17 1.9E-21 140.3 16.5 139 115-280 67-213 (230)
106 3lpm_A Putative methyltransfer 99.7 3.8E-17 1.3E-21 143.8 15.8 141 113-281 39-202 (259)
107 3bgv_A MRNA CAP guanine-N7 met 99.7 2.5E-17 8.5E-22 149.2 14.4 160 121-280 33-232 (313)
108 3eey_A Putative rRNA methylase 99.7 1.1E-17 3.7E-22 141.1 11.2 145 119-282 19-175 (197)
109 1yzh_A TRNA (guanine-N(7)-)-me 99.7 7.6E-17 2.6E-21 137.8 16.4 130 121-278 40-180 (214)
110 2yxd_A Probable cobalt-precorr 99.7 9.6E-17 3.3E-21 133.2 16.1 134 109-278 22-155 (183)
111 2h00_A Methyltransferase 10 do 99.7 1.6E-17 5.4E-22 145.8 11.7 165 106-281 47-239 (254)
112 1fp2_A Isoflavone O-methyltran 99.7 2.8E-17 9.6E-22 151.2 13.7 150 119-280 185-341 (352)
113 3p9n_A Possible methyltransfer 99.7 2.1E-17 7.3E-22 138.4 11.3 106 121-227 43-153 (189)
114 3q87_B N6 adenine specific DNA 99.7 7.5E-17 2.6E-21 132.7 14.3 119 121-280 22-149 (170)
115 1yb2_A Hypothetical protein TA 99.7 3.9E-17 1.3E-21 145.1 12.0 135 112-280 100-237 (275)
116 1dus_A MJ0882; hypothetical pr 99.7 1.2E-16 4.2E-21 133.8 14.5 116 111-228 41-158 (194)
117 1l3i_A Precorrin-6Y methyltran 99.7 8.4E-17 2.9E-21 134.6 13.4 134 110-275 21-155 (192)
118 3mb5_A SAM-dependent methyltra 99.7 6.6E-17 2.3E-21 141.9 13.2 137 111-280 82-222 (255)
119 3g89_A Ribosomal RNA small sub 99.7 6.8E-17 2.3E-21 141.1 13.1 133 120-282 78-214 (249)
120 2b3t_A Protein methyltransfera 99.7 1.5E-16 5.1E-21 141.4 15.3 141 107-278 95-261 (276)
121 2pwy_A TRNA (adenine-N(1)-)-me 99.7 1.1E-16 3.6E-21 140.8 14.1 136 112-280 86-224 (258)
122 2fyt_A Protein arginine N-meth 99.7 9.6E-17 3.3E-21 146.7 14.1 116 109-225 51-169 (340)
123 1wzn_A SAM-dependent methyltra 99.7 6.7E-17 2.3E-21 141.6 12.6 111 112-226 31-144 (252)
124 2fca_A TRNA (guanine-N(7)-)-me 99.7 1.3E-16 4.5E-21 136.1 13.8 128 122-277 38-176 (213)
125 3p2e_A 16S rRNA methylase; met 99.7 3.5E-17 1.2E-21 140.8 10.2 153 121-281 23-186 (225)
126 3lbf_A Protein-L-isoaspartate 99.7 1.4E-16 4.8E-21 135.6 13.4 111 109-227 64-174 (210)
127 3htx_A HEN1; HEN1, small RNA m 99.7 4.7E-16 1.6E-20 152.1 18.5 117 109-227 708-834 (950)
128 1jsx_A Glucose-inhibited divis 99.7 2.5E-16 8.5E-21 133.7 14.4 99 122-226 65-164 (207)
129 3q7e_A Protein arginine N-meth 99.7 1E-16 3.6E-21 147.0 12.7 113 112-225 56-171 (349)
130 3r0q_C Probable protein argini 99.7 1.8E-16 6.2E-21 146.8 14.2 118 108-227 49-169 (376)
131 2pxx_A Uncharacterized protein 99.7 9.9E-17 3.4E-21 136.8 11.6 113 111-228 33-160 (215)
132 2frn_A Hypothetical protein PH 99.7 3.7E-16 1.3E-20 138.9 15.6 131 120-276 123-253 (278)
133 2nxc_A L11 mtase, ribosomal pr 99.7 3.6E-16 1.2E-20 137.1 14.2 136 109-280 109-244 (254)
134 3dxy_A TRNA (guanine-N(7)-)-me 99.7 9.7E-17 3.3E-21 137.3 9.9 104 122-226 34-149 (218)
135 1o54_A SAM-dependent O-methylt 99.7 3.7E-16 1.3E-20 138.9 13.9 136 112-280 102-239 (277)
136 2ipx_A RRNA 2'-O-methyltransfe 99.7 3.3E-16 1.1E-20 135.6 13.1 142 116-281 71-218 (233)
137 1zg3_A Isoflavanone 4'-O-methy 99.7 1.8E-16 6.2E-21 146.2 12.0 147 120-280 191-347 (358)
138 2ld4_A Anamorsin; methyltransf 99.7 8.3E-17 2.8E-21 133.1 8.6 124 117-280 7-134 (176)
139 4dzr_A Protein-(glutamine-N5) 99.7 1.7E-17 5.7E-22 141.5 4.4 143 107-279 14-191 (215)
140 2y1w_A Histone-arginine methyl 99.7 7.4E-16 2.5E-20 141.3 15.6 115 110-226 38-154 (348)
141 1nt2_A Fibrillarin-like PRE-rR 99.7 1.3E-15 4.3E-20 129.6 15.8 103 118-226 53-160 (210)
142 3iv6_A Putative Zn-dependent a 99.7 3.5E-16 1.2E-20 136.6 12.2 108 111-227 34-148 (261)
143 2esr_A Methyltransferase; stru 99.7 8.7E-17 3E-21 133.1 7.9 119 108-227 16-138 (177)
144 2ift_A Putative methylase HI07 99.7 1.2E-16 4.2E-21 135.1 8.5 105 122-227 53-163 (201)
145 1g6q_1 HnRNP arginine N-methyl 99.7 4.9E-16 1.7E-20 141.3 12.9 115 110-225 26-143 (328)
146 3fzg_A 16S rRNA methylase; met 99.7 8.5E-17 2.9E-21 131.4 7.0 109 114-227 43-152 (200)
147 3bzb_A Uncharacterized protein 99.7 1.9E-15 6.5E-20 134.5 16.4 152 107-280 64-237 (281)
148 1i9g_A Hypothetical protein RV 99.7 8.5E-16 2.9E-20 136.7 13.3 112 111-227 88-203 (280)
149 3lec_A NADB-rossmann superfami 99.7 1.2E-15 4.1E-20 130.0 13.1 127 121-278 20-147 (230)
150 2b25_A Hypothetical protein; s 99.7 3.5E-16 1.2E-20 142.9 10.6 161 111-280 94-281 (336)
151 1u2z_A Histone-lysine N-methyl 99.7 1.1E-15 3.8E-20 142.4 14.0 121 109-230 229-362 (433)
152 3id6_C Fibrillarin-like rRNA/T 99.7 6.1E-15 2.1E-19 126.4 17.6 139 118-280 72-216 (232)
153 3u81_A Catechol O-methyltransf 99.6 3.5E-16 1.2E-20 134.3 9.6 107 120-227 56-170 (221)
154 2fhp_A Methylase, putative; al 99.6 5E-16 1.7E-20 129.5 10.0 117 110-227 31-154 (187)
155 3gdh_A Trimethylguanosine synt 99.6 2E-17 7E-22 143.9 1.1 142 122-280 78-219 (241)
156 3dr5_A Putative O-methyltransf 99.6 7.6E-16 2.6E-20 132.0 10.8 120 105-227 39-163 (221)
157 3kr9_A SAM-dependent methyltra 99.6 2.2E-15 7.5E-20 128.2 13.5 126 121-278 14-141 (225)
158 2fpo_A Methylase YHHF; structu 99.6 5.2E-16 1.8E-20 131.3 9.6 104 122-227 54-160 (202)
159 2yvl_A TRMI protein, hypotheti 99.6 4.8E-15 1.6E-19 129.3 15.9 110 112-227 81-190 (248)
160 3ntv_A MW1564 protein; rossman 99.6 6.8E-16 2.3E-20 133.5 10.2 111 115-228 64-177 (232)
161 3dmg_A Probable ribosomal RNA 99.6 2.3E-15 8E-20 139.1 14.1 120 105-227 214-340 (381)
162 2yxe_A Protein-L-isoaspartate 99.6 2.6E-15 8.8E-20 128.2 13.3 111 110-227 65-177 (215)
163 3gnl_A Uncharacterized protein 99.6 2.3E-15 7.7E-20 129.3 12.8 128 120-278 19-147 (244)
164 1vbf_A 231AA long hypothetical 99.6 1.8E-15 6.1E-20 130.7 12.2 109 109-227 57-165 (231)
165 1dl5_A Protein-L-isoaspartate 99.6 2.3E-15 7.9E-20 136.4 13.2 112 109-227 62-175 (317)
166 1af7_A Chemotaxis receptor met 99.6 7E-15 2.4E-19 129.5 15.7 104 122-225 105-250 (274)
167 3tfw_A Putative O-methyltransf 99.6 1.6E-15 5.4E-20 132.6 11.5 107 120-229 61-172 (248)
168 1g8a_A Fibrillarin-like PRE-rR 99.6 1.6E-14 5.5E-19 124.3 17.1 140 116-280 67-212 (227)
169 1p91_A Ribosomal RNA large sub 99.6 5.7E-15 1.9E-19 130.6 14.2 106 110-229 74-180 (269)
170 3ckk_A TRNA (guanine-N(7)-)-me 99.6 2.3E-15 8E-20 130.2 11.2 106 120-226 44-167 (235)
171 2ozv_A Hypothetical protein AT 99.6 2.3E-15 7.9E-20 132.4 11.3 113 114-226 28-169 (260)
172 1ixk_A Methyltransferase; open 99.6 4.9E-15 1.7E-19 133.9 13.6 140 113-277 109-272 (315)
173 4dcm_A Ribosomal RNA large sub 99.6 4.6E-15 1.6E-19 137.0 13.3 115 112-227 212-334 (375)
174 3bwc_A Spermidine synthase; SA 99.6 2.1E-15 7E-20 135.7 10.4 139 120-281 93-241 (304)
175 3b3j_A Histone-arginine methyl 99.6 2.8E-15 9.6E-20 142.6 11.6 116 108-225 144-261 (480)
176 1o9g_A RRNA methyltransferase; 99.6 1.3E-15 4.3E-20 133.4 8.2 118 110-227 39-214 (250)
177 2gpy_A O-methyltransferase; st 99.6 2.4E-15 8.3E-20 130.1 9.6 112 114-228 46-161 (233)
178 1i1n_A Protein-L-isoaspartate 99.6 1.1E-14 3.8E-19 125.2 13.4 109 113-227 66-182 (226)
179 3duw_A OMT, O-methyltransferas 99.6 3.4E-15 1.2E-19 128.2 10.1 106 120-228 56-168 (223)
180 3tma_A Methyltransferase; thum 99.6 1.9E-14 6.4E-19 132.4 15.4 117 109-226 190-316 (354)
181 4hc4_A Protein arginine N-meth 99.6 5.9E-15 2E-19 135.3 11.9 113 111-225 72-187 (376)
182 1jg1_A PIMT;, protein-L-isoasp 99.6 7.6E-15 2.6E-19 127.1 11.5 110 110-227 79-189 (235)
183 3hp7_A Hemolysin, putative; st 99.6 9.2E-15 3.2E-19 129.1 11.9 148 114-280 76-232 (291)
184 2pbf_A Protein-L-isoaspartate 99.6 1.1E-14 3.7E-19 125.4 12.0 110 113-228 69-194 (227)
185 3tr6_A O-methyltransferase; ce 99.6 3.9E-15 1.4E-19 128.0 8.7 108 120-230 62-177 (225)
186 1ws6_A Methyltransferase; stru 99.6 1.7E-15 5.7E-20 124.3 6.0 101 122-227 41-147 (171)
187 3c3p_A Methyltransferase; NP_9 99.6 3.4E-15 1.2E-19 127.1 8.1 102 122-227 56-160 (210)
188 1nv8_A HEMK protein; class I a 99.6 1.3E-14 4.3E-19 129.2 12.0 114 109-225 110-247 (284)
189 2igt_A SAM dependent methyltra 99.6 2.2E-14 7.6E-19 130.2 13.1 107 120-227 151-272 (332)
190 3r3h_A O-methyltransferase, SA 99.6 7.3E-16 2.5E-20 134.1 3.1 107 121-230 59-173 (242)
191 1r18_A Protein-L-isoaspartate( 99.6 8.8E-15 3E-19 126.1 9.7 109 112-227 72-194 (227)
192 2bm8_A Cephalosporin hydroxyla 99.6 3.7E-15 1.3E-19 129.1 7.3 98 122-228 81-188 (236)
193 3k6r_A Putative transferase PH 99.6 6.4E-14 2.2E-18 123.2 15.1 136 113-276 118-253 (278)
194 1ej0_A FTSJ; methyltransferase 99.6 1.2E-14 4E-19 119.8 9.7 98 119-228 19-137 (180)
195 2pjd_A Ribosomal RNA small sub 99.6 9.8E-15 3.3E-19 133.6 10.0 113 111-227 185-303 (343)
196 1sui_A Caffeoyl-COA O-methyltr 99.6 7.2E-15 2.5E-19 128.2 8.6 104 121-227 78-190 (247)
197 4azs_A Methyltransferase WBDD; 99.6 1.8E-15 6.2E-20 147.5 5.3 107 122-230 66-176 (569)
198 3opn_A Putative hemolysin; str 99.6 4.2E-15 1.4E-19 128.2 6.9 149 114-280 28-184 (232)
199 2vdv_E TRNA (guanine-N(7)-)-me 99.5 3.4E-14 1.2E-18 123.9 11.6 105 121-226 48-172 (246)
200 3tm4_A TRNA (guanine N2-)-meth 99.5 5.6E-14 1.9E-18 129.9 13.2 139 110-281 206-353 (373)
201 3ajd_A Putative methyltransfer 99.5 5.2E-14 1.8E-18 124.7 12.2 113 114-227 75-211 (274)
202 2qm3_A Predicted methyltransfe 99.5 2.4E-13 8.1E-18 125.8 17.0 130 120-277 170-306 (373)
203 2hnk_A SAM-dependent O-methylt 99.5 1.8E-14 6.2E-19 125.1 8.8 109 117-228 55-182 (239)
204 2yxl_A PH0851 protein, 450AA l 99.5 1.8E-13 6.1E-18 129.7 15.9 117 112-229 249-391 (450)
205 3a27_A TYW2, uncharacterized p 99.5 6.9E-14 2.4E-18 123.7 12.2 107 119-231 116-223 (272)
206 3cbg_A O-methyltransferase; cy 99.5 2.3E-14 7.8E-19 123.9 8.7 106 121-229 71-184 (232)
207 3sso_A Methyltransferase; macr 99.5 1.4E-14 4.6E-19 132.1 7.2 98 122-230 216-327 (419)
208 2avd_A Catechol-O-methyltransf 99.5 2.4E-14 8.3E-19 123.4 8.1 107 120-229 67-181 (229)
209 3c3y_A Pfomt, O-methyltransfer 99.5 3.9E-14 1.3E-18 122.8 8.3 104 121-227 69-181 (237)
210 1zq9_A Probable dimethyladenos 99.5 1.2E-13 3.9E-18 123.1 11.2 113 109-224 15-144 (285)
211 2plw_A Ribosomal RNA methyltra 99.5 1.3E-13 4.5E-18 116.2 10.9 96 120-227 20-154 (201)
212 1wy7_A Hypothetical protein PH 99.5 2.1E-12 7.3E-17 109.3 17.6 128 119-280 46-175 (207)
213 3adn_A Spermidine synthase; am 99.5 1.6E-13 5.5E-18 122.3 10.3 107 121-227 82-198 (294)
214 1ne2_A Hypothetical protein TA 99.5 1.1E-12 3.6E-17 110.6 14.1 90 119-217 48-139 (200)
215 2b78_A Hypothetical protein SM 99.5 2.5E-13 8.7E-18 125.9 11.1 107 121-227 211-331 (385)
216 3m6w_A RRNA methylase; rRNA me 99.5 2.2E-13 7.4E-18 128.2 10.5 113 113-227 92-229 (464)
217 1uwv_A 23S rRNA (uracil-5-)-me 99.4 2.5E-12 8.6E-17 121.2 17.5 132 89-226 253-388 (433)
218 2frx_A Hypothetical protein YE 99.4 8.9E-13 3.1E-17 125.1 14.4 114 115-229 108-248 (479)
219 1xj5_A Spermidine synthase 1; 99.4 2.4E-13 8.2E-18 123.3 9.7 107 120-226 118-234 (334)
220 3c0k_A UPF0064 protein YCCW; P 99.4 4.9E-13 1.7E-17 124.7 12.1 107 121-227 219-339 (396)
221 3gjy_A Spermidine synthase; AP 99.4 2.9E-13 9.8E-18 120.9 9.6 104 123-227 90-200 (317)
222 3dou_A Ribosomal RNA large sub 99.4 7.3E-13 2.5E-17 110.7 11.4 97 119-228 22-140 (191)
223 3m4x_A NOL1/NOP2/SUN family pr 99.4 3.9E-13 1.3E-17 126.3 10.6 141 112-277 95-260 (456)
224 2wa2_A Non-structural protein 99.4 5.2E-14 1.8E-18 124.3 4.2 109 114-228 74-194 (276)
225 2nyu_A Putative ribosomal RNA 99.4 6.8E-13 2.3E-17 111.3 10.8 98 119-228 19-146 (196)
226 2oxt_A Nucleoside-2'-O-methylt 99.4 6.1E-14 2.1E-18 123.1 4.2 107 116-228 68-186 (265)
227 2o07_A Spermidine synthase; st 99.4 2E-13 7E-18 122.4 7.6 108 120-227 93-209 (304)
228 1iy9_A Spermidine synthase; ro 99.4 4.7E-13 1.6E-17 118.4 9.1 105 122-226 75-188 (275)
229 1sqg_A SUN protein, FMU protei 99.4 1.1E-12 3.9E-17 123.4 12.2 115 112-228 236-375 (429)
230 1uir_A Polyamine aminopropyltr 99.4 3.2E-13 1.1E-17 121.8 7.7 106 121-226 76-194 (314)
231 2b2c_A Spermidine synthase; be 99.4 1.9E-13 6.4E-18 123.0 6.1 106 121-226 107-221 (314)
232 1inl_A Spermidine synthase; be 99.4 4.5E-13 1.5E-17 119.8 8.0 105 122-226 90-204 (296)
233 4dmg_A Putative uncharacterize 99.4 1.7E-12 5.9E-17 120.2 12.1 144 121-289 213-366 (393)
234 2pt6_A Spermidine synthase; tr 99.4 3E-13 1E-17 122.2 6.8 106 121-226 115-229 (321)
235 1wxx_A TT1595, hypothetical pr 99.4 8.1E-13 2.8E-17 122.6 9.6 104 122-227 209-325 (382)
236 2yx1_A Hypothetical protein MJ 99.4 2.5E-12 8.5E-17 117.2 12.6 101 121-230 194-294 (336)
237 1mjf_A Spermidine synthase; sp 99.4 3E-13 1E-17 120.1 5.9 104 121-226 74-192 (281)
238 2as0_A Hypothetical protein PH 99.4 4.9E-13 1.7E-17 124.8 7.3 107 121-227 216-335 (396)
239 3lcv_B Sisomicin-gentamicin re 99.4 6.5E-12 2.2E-16 107.4 13.0 141 113-276 125-268 (281)
240 2i7c_A Spermidine synthase; tr 99.4 7.7E-13 2.6E-17 117.6 7.6 107 120-226 76-191 (283)
241 2h1r_A Dimethyladenosine trans 99.4 4.3E-12 1.5E-16 113.6 12.3 89 109-201 29-117 (299)
242 3v97_A Ribosomal RNA large sub 99.4 1.6E-12 5.5E-17 129.1 10.1 105 122-226 539-656 (703)
243 2f8l_A Hypothetical protein LM 99.4 7.3E-12 2.5E-16 114.6 13.7 106 119-227 127-256 (344)
244 2cmg_A Spermidine synthase; tr 99.3 6.7E-13 2.3E-17 116.4 5.9 97 121-226 71-170 (262)
245 2xyq_A Putative 2'-O-methyl tr 99.3 2.6E-12 8.7E-17 113.7 9.3 118 117-278 58-195 (290)
246 3frh_A 16S rRNA methylase; met 99.3 9.4E-12 3.2E-16 105.4 12.3 102 121-227 104-206 (253)
247 3b5i_A S-adenosyl-L-methionine 99.3 3.7E-10 1.3E-14 103.2 22.8 211 123-334 53-352 (374)
248 1qam_A ERMC' methyltransferase 99.3 1.2E-12 4.2E-17 113.7 5.4 84 109-197 17-101 (244)
249 2jjq_A Uncharacterized RNA met 99.3 4.6E-11 1.6E-15 111.9 15.7 127 89-226 260-386 (425)
250 2p41_A Type II methyltransfera 99.3 1.4E-12 4.9E-17 116.8 5.0 103 118-227 78-191 (305)
251 2efj_A 3,7-dimethylxanthine me 99.3 4.8E-11 1.6E-15 109.1 15.0 155 123-280 53-292 (384)
252 3gru_A Dimethyladenosine trans 99.3 2.3E-11 7.8E-16 108.0 11.8 89 108-200 36-124 (295)
253 3k0b_A Predicted N6-adenine-sp 99.3 1.3E-11 4.5E-16 114.3 10.3 118 108-226 187-349 (393)
254 2okc_A Type I restriction enzy 99.3 3.8E-11 1.3E-15 113.6 13.1 117 110-227 159-307 (445)
255 3ldg_A Putative uncharacterize 99.3 3.3E-11 1.1E-15 111.1 12.3 118 108-226 180-342 (384)
256 3ldu_A Putative methylase; str 99.3 1.7E-11 6E-16 113.3 10.4 118 108-226 181-343 (385)
257 1yub_A Ermam, rRNA methyltrans 99.2 1.1E-13 3.9E-18 120.5 -4.9 111 111-226 18-144 (245)
258 3bt7_A TRNA (uracil-5-)-methyl 99.2 7.3E-11 2.5E-15 108.9 11.1 126 93-227 185-326 (369)
259 3tqs_A Ribosomal RNA small sub 99.2 9.8E-11 3.3E-15 102.0 10.7 85 109-198 16-104 (255)
260 2b9e_A NOL1/NOP2/SUN domain fa 99.2 3.4E-10 1.2E-14 101.4 14.4 112 114-227 94-234 (309)
261 2ih2_A Modification methylase 99.1 8.7E-11 3E-15 110.4 9.4 107 110-227 27-164 (421)
262 3fut_A Dimethyladenosine trans 99.1 1.5E-10 5E-15 101.6 9.0 86 109-200 34-120 (271)
263 2qfm_A Spermine synthase; sper 99.1 8.6E-11 2.9E-15 106.1 6.9 106 121-226 187-313 (364)
264 1m6e_X S-adenosyl-L-methionnin 99.1 1.2E-09 4E-14 99.1 13.3 159 122-280 51-280 (359)
265 1m6y_A S-adenosyl-methyltransf 99.1 1.7E-10 5.7E-15 102.8 7.1 87 111-199 15-107 (301)
266 3cvo_A Methyltransferase-like 99.1 1.6E-09 5.5E-14 90.2 12.0 97 122-225 30-152 (202)
267 2dul_A N(2),N(2)-dimethylguano 99.0 5.8E-10 2E-14 102.7 9.5 101 122-227 47-164 (378)
268 2r6z_A UPF0341 protein in RSP 99.0 4E-11 1.4E-15 104.7 1.4 89 113-202 74-173 (258)
269 3axs_A Probable N(2),N(2)-dime 99.0 4.8E-10 1.6E-14 103.3 8.3 103 121-227 51-158 (392)
270 3v97_A Ribosomal RNA large sub 99.0 1E-09 3.5E-14 109.1 11.1 120 108-227 176-347 (703)
271 3ftd_A Dimethyladenosine trans 99.0 2.3E-09 7.8E-14 93.1 11.2 76 108-188 17-92 (249)
272 2ar0_A M.ecoki, type I restric 99.0 8.4E-10 2.9E-14 106.5 9.0 118 110-227 157-312 (541)
273 3uzu_A Ribosomal RNA small sub 99.0 1.4E-09 4.6E-14 96.0 8.9 73 109-187 29-105 (279)
274 1qyr_A KSGA, high level kasuga 98.9 1E-09 3.4E-14 95.5 5.2 85 109-199 8-99 (252)
275 2oyr_A UPF0341 protein YHIQ; a 98.9 8.7E-10 3E-14 95.8 4.2 108 112-221 76-194 (258)
276 3lkd_A Type I restriction-modi 98.9 1.8E-08 6.2E-13 96.8 13.7 108 120-227 219-358 (542)
277 3ll7_A Putative methyltransfer 98.9 1.5E-09 5E-14 100.3 5.6 74 122-197 93-170 (410)
278 3khk_A Type I restriction-modi 98.9 4.6E-09 1.6E-13 101.2 9.3 117 110-227 233-395 (544)
279 4gqb_A Protein arginine N-meth 98.9 1.1E-08 3.6E-13 99.3 11.5 101 122-224 357-464 (637)
280 2qy6_A UPF0209 protein YFCK; s 98.8 3.9E-09 1.3E-13 91.9 5.7 128 121-279 59-234 (257)
281 3o4f_A Spermidine synthase; am 98.8 3.6E-08 1.2E-12 86.7 11.0 106 121-226 82-197 (294)
282 3evf_A RNA-directed RNA polyme 98.8 2.2E-08 7.6E-13 86.2 9.2 107 115-225 67-182 (277)
283 3ua3_A Protein arginine N-meth 98.8 3.3E-08 1.1E-12 95.8 11.1 101 123-224 410-531 (745)
284 2wk1_A NOVP; transferase, O-me 98.6 1.6E-07 5.4E-12 82.4 9.7 105 121-227 105-244 (282)
285 4auk_A Ribosomal RNA large sub 98.6 2.9E-07 9.8E-12 83.1 11.3 123 120-274 209-334 (375)
286 4fzv_A Putative methyltransfer 98.6 1.7E-07 5.8E-12 85.2 9.5 117 113-229 139-286 (359)
287 1wg8_A Predicted S-adenosylmet 98.6 1.4E-07 4.7E-12 81.9 8.0 84 111-200 11-99 (285)
288 3gcz_A Polyprotein; flavivirus 98.5 5.3E-08 1.8E-12 84.0 3.9 108 115-226 83-200 (282)
289 2k4m_A TR8_protein, UPF0146 pr 98.5 3E-07 1E-11 71.2 7.4 96 108-226 23-120 (153)
290 3s1s_A Restriction endonucleas 98.5 7.7E-07 2.6E-11 87.6 11.4 107 120-227 319-465 (878)
291 3c6k_A Spermine synthase; sper 98.4 4.4E-07 1.5E-11 82.2 6.8 106 121-226 204-330 (381)
292 3ufb_A Type I restriction-modi 98.4 1.6E-05 5.5E-10 76.4 17.8 118 109-227 204-362 (530)
293 3eld_A Methyltransferase; flav 98.3 1.6E-06 5.4E-11 75.3 8.0 103 120-226 79-190 (300)
294 3lkz_A Non-structural protein 98.2 6.2E-06 2.1E-10 71.2 9.2 107 114-225 86-202 (321)
295 1rjd_A PPM1P, carboxy methyl t 98.2 3.4E-05 1.2E-09 69.5 14.1 149 121-273 96-281 (334)
296 2vz8_A Fatty acid synthase; tr 98.1 5.7E-07 1.9E-11 100.6 1.1 147 121-277 1239-1392(2512)
297 3p8z_A Mtase, non-structural p 98.1 3.8E-05 1.3E-09 64.2 11.5 106 114-225 70-184 (267)
298 2px2_A Genome polyprotein [con 98.0 1.3E-05 4.5E-10 68.0 8.1 101 117-225 68-181 (269)
299 2zig_A TTHA0409, putative modi 98.0 3.2E-05 1.1E-09 68.7 9.8 57 110-168 224-280 (297)
300 2uyo_A Hypothetical protein ML 97.8 0.00054 1.8E-08 61.0 14.9 148 124-275 104-274 (310)
301 3tka_A Ribosomal RNA small sub 97.8 2.6E-05 8.8E-10 69.3 5.8 86 111-201 46-139 (347)
302 1i4w_A Mitochondrial replicati 97.5 0.0003 1E-08 63.5 8.8 72 109-184 39-117 (353)
303 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00036 1.2E-08 60.3 7.4 102 108-225 94-215 (344)
304 1g60_A Adenine-specific methyl 97.3 0.00057 1.9E-08 59.4 8.1 57 111-169 202-258 (260)
305 3vyw_A MNMC2; tRNA wobble urid 97.2 0.0011 3.6E-08 58.5 8.8 127 122-280 96-248 (308)
306 3iei_A Leucine carboxyl methyl 97.2 0.024 8.2E-07 50.7 17.0 152 122-280 90-281 (334)
307 1f8f_A Benzyl alcohol dehydrog 97.2 0.003 1E-07 57.8 11.3 101 114-227 182-289 (371)
308 2dph_A Formaldehyde dismutase; 96.9 0.0018 6.1E-08 59.9 7.4 104 116-227 179-299 (398)
309 1kol_A Formaldehyde dehydrogen 96.9 0.0045 1.5E-07 57.2 9.7 103 117-227 180-300 (398)
310 1pqw_A Polyketide synthase; ro 96.7 0.0055 1.9E-07 50.5 8.5 95 116-226 32-136 (198)
311 4ej6_A Putative zinc-binding d 96.7 0.022 7.7E-07 51.9 13.0 99 116-227 176-284 (370)
312 3two_A Mannitol dehydrogenase; 96.6 0.0034 1.2E-07 56.9 6.7 95 116-227 170-265 (348)
313 3fpc_A NADP-dependent alcohol 96.5 0.0061 2.1E-07 55.3 7.9 99 116-227 160-266 (352)
314 1pl8_A Human sorbitol dehydrog 96.5 0.007 2.4E-07 54.9 8.2 99 116-227 165-273 (356)
315 3s2e_A Zinc-containing alcohol 96.5 0.0066 2.3E-07 54.7 8.0 100 115-227 159-263 (340)
316 3uog_A Alcohol dehydrogenase; 96.4 0.012 3.9E-07 53.7 9.1 99 116-228 183-288 (363)
317 1e3j_A NADP(H)-dependent ketos 96.4 0.019 6.4E-07 52.0 10.3 99 116-227 162-271 (352)
318 3uko_A Alcohol dehydrogenase c 96.3 0.011 3.7E-07 54.2 8.6 101 114-227 185-295 (378)
319 2oo3_A Protein involved in cat 96.3 0.0014 4.9E-08 56.8 2.4 99 123-225 92-196 (283)
320 3m6i_A L-arabinitol 4-dehydrog 96.3 0.02 6.8E-07 52.0 10.2 101 116-227 173-283 (363)
321 3tos_A CALS11; methyltransfera 96.3 0.014 4.8E-07 50.1 8.4 102 124-227 71-217 (257)
322 1v3u_A Leukotriene B4 12- hydr 96.3 0.01 3.6E-07 53.2 8.0 97 114-226 137-243 (333)
323 3gms_A Putative NADPH:quinone 96.3 0.012 4.1E-07 53.0 8.2 99 114-226 136-242 (340)
324 2py6_A Methyltransferase FKBM; 96.2 0.014 4.7E-07 54.1 8.3 65 119-183 223-293 (409)
325 2fzw_A Alcohol dehydrogenase c 96.1 0.024 8.1E-07 51.7 9.7 100 115-227 183-292 (373)
326 1uuf_A YAHK, zinc-type alcohol 96.1 0.0047 1.6E-07 56.4 4.9 96 117-226 189-287 (369)
327 1p0f_A NADP-dependent alcohol 96.1 0.022 7.4E-07 52.0 9.2 101 114-227 183-293 (373)
328 1cdo_A Alcohol dehydrogenase; 96.1 0.02 6.9E-07 52.2 9.0 100 115-227 185-294 (374)
329 3jyn_A Quinone oxidoreductase; 96.1 0.016 5.6E-07 51.7 8.1 99 115-227 133-239 (325)
330 4b7c_A Probable oxidoreductase 96.1 0.011 3.8E-07 53.1 7.0 101 114-227 141-248 (336)
331 2jhf_A Alcohol dehydrogenase E 96.0 0.026 8.7E-07 51.5 9.4 100 115-227 184-293 (374)
332 2eih_A Alcohol dehydrogenase; 96.0 0.063 2.1E-06 48.3 11.7 94 118-227 162-265 (343)
333 4eye_A Probable oxidoreductase 96.0 0.013 4.5E-07 52.8 7.2 97 116-227 153-257 (342)
334 1e3i_A Alcohol dehydrogenase, 95.9 0.026 9E-07 51.5 9.0 100 115-227 188-297 (376)
335 2j3h_A NADP-dependent oxidored 95.9 0.023 7.8E-07 51.2 8.4 97 115-226 148-254 (345)
336 3goh_A Alcohol dehydrogenase, 95.9 0.015 5.1E-07 51.7 7.1 92 116-226 136-228 (315)
337 3qwb_A Probable quinone oxidor 95.9 0.016 5.3E-07 52.1 7.3 98 116-227 142-247 (334)
338 3ip1_A Alcohol dehydrogenase, 95.9 0.048 1.6E-06 50.3 10.7 97 119-227 210-318 (404)
339 2c0c_A Zinc binding alcohol de 95.9 0.029 1E-06 50.9 8.9 98 116-227 157-261 (362)
340 3qv2_A 5-cytosine DNA methyltr 95.8 0.054 1.8E-06 48.4 10.2 122 123-276 10-156 (327)
341 4dup_A Quinone oxidoreductase; 95.8 0.031 1.1E-06 50.5 8.8 99 115-227 160-265 (353)
342 2d8a_A PH0655, probable L-thre 95.7 0.029 9.9E-07 50.6 8.3 98 116-227 162-267 (348)
343 2h6e_A ADH-4, D-arabinose 1-de 95.7 0.0049 1.7E-07 55.7 2.9 94 119-227 168-269 (344)
344 1jvb_A NAD(H)-dependent alcoho 95.7 0.028 9.6E-07 50.7 7.9 99 116-227 164-271 (347)
345 2hcy_A Alcohol dehydrogenase 1 95.6 0.016 5.4E-07 52.4 6.0 97 116-227 163-269 (347)
346 1rjw_A ADH-HT, alcohol dehydro 95.6 0.033 1.1E-06 50.1 8.0 96 117-227 159-261 (339)
347 1yb5_A Quinone oxidoreductase; 95.6 0.034 1.2E-06 50.2 8.1 96 116-227 164-269 (351)
348 1qor_A Quinone oxidoreductase; 95.5 0.045 1.5E-06 48.8 8.7 95 117-227 135-239 (327)
349 3pvc_A TRNA 5-methylaminomethy 95.5 0.033 1.1E-06 55.3 8.4 126 122-278 58-231 (689)
350 3g7u_A Cytosine-specific methy 95.5 0.033 1.1E-06 50.8 7.7 69 124-199 3-80 (376)
351 3fbg_A Putative arginate lyase 95.5 0.06 2.1E-06 48.5 9.4 98 115-226 137-247 (346)
352 2zwa_A Leucine carboxyl methyl 95.5 0.76 2.6E-05 45.5 18.0 154 122-280 107-309 (695)
353 1wly_A CAAR, 2-haloacrylate re 95.4 0.079 2.7E-06 47.4 9.9 96 116-227 139-244 (333)
354 1zkd_A DUF185; NESG, RPR58, st 95.3 0.14 4.8E-06 46.6 11.2 51 116-166 74-132 (387)
355 4dvj_A Putative zinc-dependent 95.3 0.066 2.2E-06 48.6 9.1 97 116-226 160-269 (363)
356 2j8z_A Quinone oxidoreductase; 95.2 0.056 1.9E-06 48.9 8.3 96 116-227 156-261 (354)
357 2b5w_A Glucose dehydrogenase; 95.2 0.025 8.6E-07 51.2 6.0 95 117-227 161-273 (357)
358 1vj0_A Alcohol dehydrogenase, 95.2 0.025 8.4E-07 51.8 5.9 99 116-227 188-298 (380)
359 1g55_A DNA cytosine methyltran 95.2 0.017 5.6E-07 52.2 4.6 70 124-199 3-77 (343)
360 3jv7_A ADH-A; dehydrogenase, n 95.2 0.039 1.3E-06 49.7 7.1 95 119-227 168-270 (345)
361 1piw_A Hypothetical zinc-type 95.1 0.034 1.2E-06 50.4 6.6 99 117-227 174-276 (360)
362 3nx4_A Putative oxidoreductase 95.1 0.015 5E-07 52.0 3.8 97 117-226 140-240 (324)
363 1boo_A Protein (N-4 cytosine-s 95.1 0.041 1.4E-06 49.1 6.7 56 112-169 243-298 (323)
364 3ps9_A TRNA 5-methylaminomethy 94.9 0.091 3.1E-06 52.0 9.3 126 122-278 66-239 (676)
365 1eg2_A Modification methylase 94.9 0.059 2E-06 48.0 7.2 56 112-169 233-291 (319)
366 2dq4_A L-threonine 3-dehydroge 94.8 0.0035 1.2E-07 56.6 -0.9 94 117-227 160-262 (343)
367 2cdc_A Glucose dehydrogenase g 94.7 0.085 2.9E-06 47.9 7.9 87 123-227 181-278 (366)
368 4a2c_A Galactitol-1-phosphate 94.6 0.19 6.6E-06 45.0 10.1 101 114-227 152-260 (346)
369 2zb4_A Prostaglandin reductase 94.6 0.098 3.4E-06 47.2 8.1 99 114-227 150-260 (357)
370 3ubt_Y Modification methylase 94.5 0.44 1.5E-05 42.4 12.1 124 124-276 1-139 (331)
371 3gaz_A Alcohol dehydrogenase s 94.4 0.094 3.2E-06 47.1 7.4 94 116-226 144-245 (343)
372 2c7p_A Modification methylase 94.3 0.097 3.3E-06 46.7 7.2 67 123-198 11-79 (327)
373 1iz0_A Quinone oxidoreductase; 94.2 0.013 4.3E-07 51.8 1.3 93 120-227 123-218 (302)
374 3tqh_A Quinone oxidoreductase; 94.2 0.15 5E-06 45.3 8.3 96 116-226 146-244 (321)
375 2cf5_A Atccad5, CAD, cinnamyl 94.2 0.038 1.3E-06 50.1 4.3 99 117-227 174-275 (357)
376 3krt_A Crotonyl COA reductase; 94.2 0.17 5.8E-06 47.4 8.9 96 118-227 224-344 (456)
377 1yqd_A Sinapyl alcohol dehydro 94.0 0.046 1.6E-06 49.7 4.6 99 117-227 181-282 (366)
378 1xa0_A Putative NADPH dependen 94.0 0.04 1.4E-06 49.2 4.1 99 117-226 143-245 (328)
379 1tt7_A YHFP; alcohol dehydroge 93.6 0.041 1.4E-06 49.2 3.4 100 117-227 144-247 (330)
380 4f3n_A Uncharacterized ACR, CO 93.5 0.38 1.3E-05 44.4 9.7 45 123-167 138-188 (432)
381 4eez_A Alcohol dehydrogenase 1 93.4 0.34 1.2E-05 43.4 9.3 100 115-227 156-263 (348)
382 3fwz_A Inner membrane protein 93.2 0.45 1.5E-05 36.4 8.4 88 123-225 7-103 (140)
383 4a0s_A Octenoyl-COA reductase/ 93.1 0.29 9.8E-06 45.7 8.5 99 118-227 216-336 (447)
384 3me5_A Cytosine-specific methy 93.0 1.6 5.5E-05 41.0 13.4 58 123-184 88-146 (482)
385 2vn8_A Reticulon-4-interacting 92.9 0.056 1.9E-06 49.3 3.2 94 120-226 181-279 (375)
386 1zsy_A Mitochondrial 2-enoyl t 92.9 0.6 2.1E-05 42.0 10.1 97 116-226 161-269 (357)
387 1pjc_A Protein (L-alanine dehy 92.6 0.069 2.4E-06 48.4 3.4 99 123-226 167-266 (361)
388 3gqv_A Enoyl reductase; medium 92.6 0.52 1.8E-05 42.7 9.3 92 121-226 163-262 (371)
389 2vhw_A Alanine dehydrogenase; 92.3 0.075 2.6E-06 48.5 3.3 100 122-226 167-267 (377)
390 4h0n_A DNMT2; SAH binding, tra 92.2 0.21 7.2E-06 44.6 5.9 68 124-198 4-77 (333)
391 2qrv_A DNA (cytosine-5)-methyl 91.9 0.61 2.1E-05 40.8 8.4 71 121-198 14-91 (295)
392 4dcm_A Ribosomal RNA large sub 91.7 1.8 6.3E-05 39.2 11.8 98 122-227 38-136 (375)
393 2zig_A TTHA0409, putative modi 91.7 0.071 2.4E-06 46.9 2.2 54 173-226 21-96 (297)
394 3ioy_A Short-chain dehydrogena 91.5 1.4 4.7E-05 38.9 10.6 79 122-201 7-98 (319)
395 2eez_A Alanine dehydrogenase; 91.4 0.12 3.9E-06 47.1 3.4 100 122-226 165-265 (369)
396 3c85_A Putative glutathione-re 90.8 0.83 2.9E-05 36.5 7.7 90 123-225 39-137 (183)
397 1gu7_A Enoyl-[acyl-carrier-pro 90.7 0.17 5.7E-06 45.8 3.8 100 118-227 162-275 (364)
398 3p2y_A Alanine dehydrogenase/p 90.7 0.075 2.6E-06 48.3 1.4 96 122-225 183-300 (381)
399 4dio_A NAD(P) transhydrogenase 90.5 0.1 3.5E-06 47.8 2.2 96 122-225 189-310 (405)
400 3ce6_A Adenosylhomocysteinase; 90.3 0.45 1.6E-05 44.8 6.4 89 120-226 271-360 (494)
401 3llv_A Exopolyphosphatase-rela 90.2 1.9 6.4E-05 32.7 9.0 66 123-198 6-78 (141)
402 1xg5_A ARPG836; short chain de 90.2 4.2 0.00014 34.8 12.2 79 122-201 31-122 (279)
403 3pi7_A NADH oxidoreductase; gr 90.0 0.34 1.2E-05 43.5 5.1 93 121-227 162-263 (349)
404 3oig_A Enoyl-[acyl-carrier-pro 89.9 2.5 8.7E-05 35.8 10.5 104 122-227 6-147 (266)
405 1l7d_A Nicotinamide nucleotide 89.5 0.16 5.4E-06 46.5 2.6 42 122-163 171-213 (384)
406 4eso_A Putative oxidoreductase 89.5 1.4 4.8E-05 37.4 8.4 99 122-226 7-137 (255)
407 3pxx_A Carveol dehydrogenase; 89.2 3.5 0.00012 35.4 11.0 102 122-226 9-152 (287)
408 3v2g_A 3-oxoacyl-[acyl-carrier 89.1 4.6 0.00016 34.5 11.6 102 122-226 30-164 (271)
409 3l9w_A Glutathione-regulated p 88.9 1 3.5E-05 41.5 7.5 91 123-226 4-101 (413)
410 2gdz_A NAD+-dependent 15-hydro 88.7 2.2 7.6E-05 36.3 9.3 85 122-207 6-103 (267)
411 3grk_A Enoyl-(acyl-carrier-pro 88.7 4.3 0.00015 35.2 11.2 102 122-227 30-169 (293)
412 1x13_A NAD(P) transhydrogenase 88.5 0.15 5E-06 47.0 1.6 41 122-162 171-212 (401)
413 3o26_A Salutaridine reductase; 88.3 2.7 9.1E-05 36.5 9.7 78 122-201 11-102 (311)
414 4g81_D Putative hexonate dehyd 88.1 2.2 7.7E-05 36.3 8.7 78 122-202 8-98 (255)
415 3ijr_A Oxidoreductase, short c 87.8 4.2 0.00014 35.1 10.6 102 122-226 46-181 (291)
416 3is3_A 17BETA-hydroxysteroid d 87.7 4.5 0.00015 34.4 10.6 103 122-227 17-152 (270)
417 4fs3_A Enoyl-[acyl-carrier-pro 87.5 4.7 0.00016 34.1 10.5 104 122-227 5-146 (256)
418 1boo_A Protein (N-4 cytosine-s 87.5 0.24 8.4E-06 44.0 2.3 54 173-226 14-83 (323)
419 1wma_A Carbonyl reductase [NAD 87.1 1.9 6.4E-05 36.6 7.8 102 122-226 3-137 (276)
420 3r3s_A Oxidoreductase; structu 86.9 4.3 0.00015 35.1 10.1 102 122-226 48-184 (294)
421 3ius_A Uncharacterized conserv 86.9 9.2 0.00032 32.5 12.2 91 124-226 6-101 (286)
422 4imr_A 3-oxoacyl-(acyl-carrier 85.6 2.8 9.7E-05 35.9 8.1 77 122-201 32-120 (275)
423 2km1_A Protein DRE2; yeast, an 85.5 0.73 2.5E-05 35.0 3.6 41 185-225 54-96 (136)
424 2g1u_A Hypothetical protein TM 85.4 1.2 4.2E-05 34.5 5.2 93 121-225 17-116 (155)
425 1lss_A TRK system potassium up 85.2 9.5 0.00033 28.2 11.4 90 123-225 4-100 (140)
426 4a27_A Synaptic vesicle membra 85.1 0.92 3.2E-05 40.6 4.9 97 114-227 134-238 (349)
427 3n58_A Adenosylhomocysteinase; 85.1 3.3 0.00011 38.3 8.5 87 121-225 245-332 (464)
428 4fgs_A Probable dehydrogenase 85.0 3.7 0.00013 35.4 8.4 99 122-226 28-158 (273)
429 3k31_A Enoyl-(acyl-carrier-pro 84.9 4.8 0.00016 34.9 9.4 102 122-227 29-168 (296)
430 1h2b_A Alcohol dehydrogenase; 84.7 1.8 6.3E-05 38.8 6.7 96 118-227 182-285 (359)
431 3edm_A Short chain dehydrogena 84.2 2.6 8.9E-05 35.7 7.2 102 122-226 7-142 (259)
432 4fn4_A Short chain dehydrogena 84.1 4.8 0.00017 34.2 8.7 76 122-200 6-94 (254)
433 3ek2_A Enoyl-(acyl-carrier-pro 84.0 3.4 0.00012 35.0 7.9 104 121-227 12-153 (271)
434 1id1_A Putative potassium chan 83.9 8.9 0.0003 29.3 9.7 93 123-225 3-103 (153)
435 3ggo_A Prephenate dehydrogenas 83.8 6 0.0002 34.7 9.5 89 123-224 33-125 (314)
436 3e8x_A Putative NAD-dependent 83.6 7.4 0.00025 32.1 9.7 72 122-202 20-96 (236)
437 3iht_A S-adenosyl-L-methionine 83.6 3.4 0.00012 32.1 6.6 109 107-225 26-145 (174)
438 3sx2_A Putative 3-ketoacyl-(ac 83.3 6 0.00021 33.7 9.2 78 122-202 12-114 (278)
439 2rir_A Dipicolinate synthase, 83.2 2.1 7.2E-05 37.4 6.3 87 122-225 156-244 (300)
440 3gvp_A Adenosylhomocysteinase 83.1 2.2 7.7E-05 39.2 6.5 87 121-225 218-305 (435)
441 3f9i_A 3-oxoacyl-[acyl-carrier 83.0 10 0.00035 31.6 10.4 75 121-201 12-95 (249)
442 3d4o_A Dipicolinate synthase s 83.0 1.7 5.7E-05 37.9 5.5 87 122-225 154-242 (293)
443 3l4b_C TRKA K+ channel protien 82.8 7.5 0.00026 31.8 9.3 90 124-225 1-97 (218)
444 1xhl_A Short-chain dehydrogena 82.7 7.7 0.00026 33.6 9.8 78 122-200 25-116 (297)
445 2vz8_A Fatty acid synthase; tr 82.6 0.72 2.5E-05 52.3 3.6 101 116-226 1661-1769(2512)
446 3ond_A Adenosylhomocysteinase; 82.2 27 0.00094 32.6 13.5 84 122-225 264-350 (488)
447 1g0o_A Trihydroxynaphthalene r 80.9 7.9 0.00027 33.1 9.1 101 123-226 29-162 (283)
448 3u5t_A 3-oxoacyl-[acyl-carrier 80.2 7.5 0.00026 33.0 8.6 102 122-226 26-160 (267)
449 2a4k_A 3-oxoacyl-[acyl carrier 80.0 8.6 0.0003 32.5 8.9 98 123-226 6-135 (263)
450 3ucx_A Short chain dehydrogena 79.3 11 0.00038 31.8 9.4 76 122-200 10-98 (264)
451 1zcj_A Peroxisomal bifunctiona 79.3 10 0.00036 35.2 9.8 95 123-224 37-147 (463)
452 1e7w_A Pteridine reductase; di 79.2 27 0.00093 29.8 12.0 60 123-185 9-73 (291)
453 2hwk_A Helicase NSP2; rossman 79.1 4.9 0.00017 34.5 6.7 95 130-229 149-256 (320)
454 3slk_A Polyketide synthase ext 78.4 0.81 2.8E-05 46.0 2.0 91 118-226 341-441 (795)
455 2x9g_A PTR1, pteridine reducta 78.3 9.8 0.00033 32.6 8.8 76 122-200 22-116 (288)
456 3o38_A Short chain dehydrogena 77.9 9.8 0.00034 32.1 8.7 78 122-201 21-112 (266)
457 2f1k_A Prephenate dehydrogenas 77.8 10 0.00034 32.3 8.7 86 124-224 1-88 (279)
458 3nyw_A Putative oxidoreductase 77.3 11 0.00038 31.5 8.7 79 122-201 6-98 (250)
459 3qiv_A Short-chain dehydrogena 77.3 9.8 0.00034 31.7 8.4 76 122-200 8-96 (253)
460 3hwr_A 2-dehydropantoate 2-red 77.2 9.7 0.00033 33.3 8.6 93 123-225 19-118 (318)
461 4hp8_A 2-deoxy-D-gluconate 3-d 77.1 12 0.00041 31.5 8.7 76 122-202 8-91 (247)
462 3c24_A Putative oxidoreductase 77.0 12 0.00041 32.0 9.0 84 124-224 12-98 (286)
463 3ksu_A 3-oxoacyl-acyl carrier 76.8 8.5 0.00029 32.5 7.9 102 122-226 10-146 (262)
464 3rku_A Oxidoreductase YMR226C; 76.7 11 0.00038 32.4 8.7 79 122-201 32-126 (287)
465 3h7a_A Short chain dehydrogena 76.7 6.8 0.00023 32.9 7.2 77 122-201 6-94 (252)
466 4g65_A TRK system potassium up 76.2 3.2 0.00011 38.7 5.4 66 123-197 3-75 (461)
467 3h2s_A Putative NADH-flavin re 76.2 24 0.00082 28.4 10.4 94 124-226 1-103 (224)
468 1g60_A Adenine-specific methyl 76.2 0.74 2.5E-05 39.4 0.9 52 175-226 6-73 (260)
469 3lf2_A Short chain oxidoreduct 76.0 12 0.00042 31.5 8.8 79 122-201 7-98 (265)
470 1qsg_A Enoyl-[acyl-carrier-pro 75.9 19 0.00066 30.2 10.0 77 122-201 8-98 (265)
471 1y1p_A ARII, aldehyde reductas 75.7 39 0.0013 29.2 12.3 80 121-202 9-95 (342)
472 3dmg_A Probable ribosomal RNA 75.6 6.4 0.00022 35.6 7.1 102 112-226 36-138 (381)
473 3gaf_A 7-alpha-hydroxysteroid 75.5 11 0.00038 31.6 8.3 77 122-201 11-100 (256)
474 3ojo_A CAP5O; rossmann fold, c 75.4 21 0.00073 32.8 10.6 95 122-225 10-127 (431)
475 3tjr_A Short chain dehydrogena 75.3 12 0.00043 32.3 8.7 77 122-201 30-119 (301)
476 3l77_A Short-chain alcohol deh 75.0 23 0.0008 29.0 10.1 77 123-202 2-92 (235)
477 3rkr_A Short chain oxidoreduct 74.6 11 0.00036 31.8 7.9 76 122-200 28-116 (262)
478 1iy8_A Levodione reductase; ox 74.5 15 0.0005 31.0 8.8 79 122-201 12-103 (267)
479 2ew2_A 2-dehydropantoate 2-red 74.3 7.9 0.00027 33.5 7.2 90 124-225 4-106 (316)
480 3nzo_A UDP-N-acetylglucosamine 74.0 11 0.00037 34.2 8.3 80 123-203 35-125 (399)
481 3t4x_A Oxidoreductase, short c 73.7 11 0.00038 31.8 7.9 79 122-201 9-96 (267)
482 3h9u_A Adenosylhomocysteinase; 73.3 11 0.00039 34.6 8.0 86 122-225 210-296 (436)
483 4e12_A Diketoreductase; oxidor 72.8 10 0.00036 32.5 7.5 95 124-224 5-118 (283)
484 1lld_A L-lactate dehydrogenase 72.8 29 0.00099 30.1 10.6 97 123-225 7-122 (319)
485 3tfo_A Putative 3-oxoacyl-(acy 72.7 12 0.00042 31.6 7.9 76 123-201 4-92 (264)
486 2h7i_A Enoyl-[acyl-carrier-pro 72.7 6.4 0.00022 33.4 6.0 101 122-227 6-148 (269)
487 2g5c_A Prephenate dehydrogenas 72.7 13 0.00045 31.6 8.2 88 124-225 2-94 (281)
488 3svt_A Short-chain type dehydr 72.2 15 0.0005 31.3 8.3 78 122-200 10-101 (281)
489 2aef_A Calcium-gated potassium 72.2 15 0.00052 30.3 8.2 89 122-225 8-103 (234)
490 3lyl_A 3-oxoacyl-(acyl-carrier 72.1 15 0.00051 30.4 8.2 76 123-201 5-93 (247)
491 3sju_A Keto reductase; short-c 71.7 15 0.0005 31.4 8.2 77 122-201 23-112 (279)
492 3ew7_A LMO0794 protein; Q8Y8U8 71.5 31 0.0011 27.5 10.0 93 124-226 1-101 (221)
493 3imf_A Short chain dehydrogena 71.3 10 0.00035 31.9 7.0 75 123-200 6-93 (257)
494 1yb1_A 17-beta-hydroxysteroid 71.2 18 0.00063 30.5 8.7 77 122-201 30-119 (272)
495 2v6b_A L-LDH, L-lactate dehydr 71.0 28 0.00095 30.2 9.9 96 124-225 1-114 (304)
496 3v8b_A Putative dehydrogenase, 70.8 15 0.00051 31.4 8.1 76 122-200 27-115 (283)
497 3pk0_A Short-chain dehydrogena 70.8 14 0.00048 31.1 7.8 78 122-201 9-99 (262)
498 3awd_A GOX2181, putative polyo 70.5 20 0.00068 29.9 8.7 77 122-201 12-101 (260)
499 2pd4_A Enoyl-[acyl-carrier-pro 70.5 16 0.00056 30.9 8.2 103 122-227 5-144 (275)
500 3r1i_A Short-chain type dehydr 70.4 12 0.00042 31.8 7.4 78 122-202 31-121 (276)
No 1
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.97 E-value=2e-29 Score=224.37 Aligned_cols=210 Identities=29% Similarity=0.500 Sum_probs=158.4
Q ss_pred hhhHHHHhhhhhHHHHHhhcCCceeecCCCCC---CCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcC
Q 018194 69 VPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPG---KSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSR 145 (359)
Q Consensus 69 ~~~~v~~~yd~~~~~y~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~ 145 (359)
..+.+..|||..+++|+..++..++++..... ..+.+++....+.+++.+.+.++.+|||||||+|.++..+++..+
T Consensus 5 ~~~~~~~~Yd~~~~~y~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~ 84 (273)
T 3bus_A 5 TPEEVRQMYDDFTDPFARIWGENLHFGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARD 84 (273)
T ss_dssp ------------------CCGGGCCCCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSC
T ss_pred cHHHHHHHHcchHHHHHHHcCCCceEEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC
Confidence 35678899999999999999988776443221 478888999999999999999999999999999999999998667
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 146 ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 146 ~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
++|+|+|+|+.+++.++++....++.++++++.+|+.++++++++||+|++..+++|++++..+++++.++|||||++++
T Consensus 85 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 85 VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEE
Confidence 89999999999999999999988888889999999999998889999999999999999999999999999999999999
Q ss_pred EEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 226 YEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
.++........ ........+........+.+.+++.++|+++||++++...+.
T Consensus 165 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 165 ADFVLLAPVEG---AKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDIS 217 (273)
T ss_dssp EEEEESSCCCH---HHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEECH
T ss_pred EEeeccCCCCh---hHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEECc
Confidence 88765432221 111111111111123356789999999999999999988874
No 2
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.97 E-value=6.7e-30 Score=230.37 Aligned_cols=209 Identities=25% Similarity=0.375 Sum_probs=172.6
Q ss_pred cchhhHHHHhhhhh--HHHHHhhcC-CceeecCCC-C--CCCHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCCChH
Q 018194 67 EKVPDFVDTFYNLV--TDIYEWGWG-QSFHFSPSI-P--GKSHRDATRLHEEMAVDLI----DVKAGDRILDVGCGVGGP 136 (359)
Q Consensus 67 ~~~~~~v~~~yd~~--~~~y~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~----~~~~~~~vLDiGcG~G~~ 136 (359)
....+.+..|||.. .++|+..|+ ++++++... + ...+...+....+.++..+ .+.++.+|||||||+|.+
T Consensus 17 ~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~ 96 (297)
T 2o57_A 17 KTVKDNAEIYYDDDDSDRFYFHVWGGEDIHVGLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGA 96 (297)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTSCCCSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHH
T ss_pred HHHHHHHHHHcCCccchhHHHHHhCCCceEEEecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHH
Confidence 34456788999997 599998884 666664432 2 5678888888888899888 888999999999999999
Q ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccccCCHHHHHHHHHhc
Q 018194 137 MRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRV 216 (359)
Q Consensus 137 ~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~ 216 (359)
+..+++..+++|+|+|+|+.+++.++++....++.++++++++|+.++|+++++||+|++..+++|++++..+++++.++
T Consensus 97 ~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~ 176 (297)
T 2o57_A 97 ARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARV 176 (297)
T ss_dssp HHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHH
Confidence 99999865789999999999999999999988888899999999999999889999999999999999999999999999
Q ss_pred cCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 217 LKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 217 LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
|||||++++.++......... ....+.... ..+.+.+..++.++|+++||++++..+++
T Consensus 177 LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 177 LKPRGVMAITDPMKEDGIDKS--SIQPILDRI----KLHDMGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp EEEEEEEEEEEEEECTTCCGG--GGHHHHHHH----TCSSCCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred cCCCeEEEEEEeccCCCCchH--HHHHHHHHh----cCCCCCCHHHHHHHHHHCCCeEEEEEECc
Confidence 999999999887665432221 112222222 22346688999999999999999988764
No 3
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.97 E-value=6.9e-29 Score=224.29 Aligned_cols=264 Identities=18% Similarity=0.268 Sum_probs=196.7
Q ss_pred cccchhhHHHHhhhhhHHHHHhhcCCceeecCCC---CCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHH
Q 018194 65 TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSI---PGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIA 141 (359)
Q Consensus 65 ~~~~~~~~v~~~yd~~~~~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~ 141 (359)
.....++.++.+||..+++|+.++++.+.|+..+ +..++.+++....+.++..+.+.++.+|||||||+|.++..++
T Consensus 12 ~~~~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la 91 (302)
T 3hem_A 12 QLKPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAV 91 (302)
T ss_dssp CCCCCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHH
T ss_pred cccchHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHH
Confidence 3456788999999999999999999988877654 3567889999999999999999999999999999999999999
Q ss_pred hhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccccCCH---------HHHHHH
Q 018194 142 AHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKL---------EDVYAE 212 (359)
Q Consensus 142 ~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------~~~l~~ 212 (359)
+..+++|+|+|+|+.+++.++++....++.+++++..+|+.++ +++||+|++..+++|++|+ ..++++
T Consensus 92 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~ 168 (302)
T 3hem_A 92 AEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKK 168 (302)
T ss_dssp HHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHH
T ss_pred HhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHH
Confidence 9756899999999999999999999999888999999999876 6899999999999999665 799999
Q ss_pred HHhccCCCCEEEEEEeeeCcccccCc---------hHHHHHHh-hhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecCC
Q 018194 213 VFRVLKPGSLYVSYEWVTTDKYEAEN---------KEHVDIIQ-GIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAK 282 (359)
Q Consensus 213 ~~~~LkpgG~l~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~~ 282 (359)
+.++|||||++++.++.......... .....+.. .+..+. .+.+.+++.++++++||++++.+++..
T Consensus 169 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 169 FYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG---RLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp HHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC---CCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred HHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC---CCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 99999999999998876543211000 00012222 222222 356789999999999999999988743
Q ss_pred CCCCchhhhhhccchhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhcCcccccc
Q 018194 283 PPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFT 343 (359)
Q Consensus 283 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 343 (359)
+. . .....|.........+...+..+...+....+...+......|...++.
T Consensus 246 ~y-----~----~tl~~w~~~~~~~~~~~~~~~~~~~~~~w~~yl~~~~~~f~~~~~~~~q 297 (302)
T 3hem_A 246 NY-----V----PTLNAWADALQAHKDEAIALKGQETCDIYMHYLRGCSDLFRDKYTDVCQ 297 (302)
T ss_dssp GH-----H----HHHHHHHHHHHHTHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred hH-----H----HHHHHHHHHHHHhHHHHHHHhCHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 21 1 1233344433333222222222223344555556666666666665444
No 4
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.96 E-value=1e-27 Score=214.93 Aligned_cols=209 Identities=21% Similarity=0.260 Sum_probs=170.4
Q ss_pred cchhhHHHHhhhhhHHHHHhhcCCceeecCCC---CCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh
Q 018194 67 EKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSI---PGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH 143 (359)
Q Consensus 67 ~~~~~~v~~~yd~~~~~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 143 (359)
....+.++.+||..+++|+.++++.++|+..+ +...+.+++....+.+++.+.+.++.+|||||||+|.++..+++.
T Consensus 6 ~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 85 (287)
T 1kpg_A 6 KPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEK 85 (287)
T ss_dssp CCCHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHH
T ss_pred cccHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHH
Confidence 34567899999999999999999887775543 456788899989999999999999999999999999999999965
Q ss_pred cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccccccc--CCHHHHHHHHHhccCCCC
Q 018194 144 SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHA--PKLEDVYAEVFRVLKPGS 221 (359)
Q Consensus 144 ~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG 221 (359)
.+++|+|+|+|+.+++.++++....++.+++++..+|+.+++ ++||+|++..+++|+ +++..+++++.++|||||
T Consensus 86 ~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 162 (287)
T 1kpg_A 86 YDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADG 162 (287)
T ss_dssp HCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTC
T ss_pred cCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCC
Confidence 578999999999999999999988888788999999998765 789999999999999 679999999999999999
Q ss_pred EEEEEEeeeCcccc-----cCc-h---HHHHHH-hhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 222 LYVSYEWVTTDKYE-----AEN-K---EHVDII-QGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 222 ~l~~~~~~~~~~~~-----~~~-~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
++++.++....... ... . ....+. ..+..+. .+.+.+++.++++++||++++...+.
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 163 VMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGG---RLPSIPMVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp EEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTC---CCCCHHHHHHHHHTTTCEEEEEEECH
T ss_pred EEEEEEecCCCccccccccccccccccchhhhHHheeCCCC---CCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 99998876543211 000 0 111111 2222222 45589999999999999999988763
No 5
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.96 E-value=2e-27 Score=216.27 Aligned_cols=211 Identities=21% Similarity=0.326 Sum_probs=166.1
Q ss_pred cccchhhHHHHhhhhhHHHHHhhcCCceeecCCC---CCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHH
Q 018194 65 TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSI---PGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIA 141 (359)
Q Consensus 65 ~~~~~~~~v~~~yd~~~~~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~ 141 (359)
+....++.++.+||..+++|+.+++...+|+..+ +...+.+++....+.+++.+.+.++.+|||||||+|.++..++
T Consensus 30 ~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la 109 (318)
T 2fk8_A 30 KTRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAV 109 (318)
T ss_dssp --------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHH
T ss_pred ChhhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHH
Confidence 3445677888999999999999999887776543 4567888888899999999999999999999999999999999
Q ss_pred hhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccccccc--CCHHHHHHHHHhccCC
Q 018194 142 AHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHA--PKLEDVYAEVFRVLKP 219 (359)
Q Consensus 142 ~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~Lkp 219 (359)
+..+++|+|+|+|+.+++.++++....++.+++++..+|+.+++ ++||+|++..+++|+ +++..+++++.++|||
T Consensus 110 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 186 (318)
T 2fk8_A 110 ERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPA 186 (318)
T ss_dssp HHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCT
T ss_pred HHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCC
Confidence 86578999999999999999999988888778999999998764 789999999999999 5889999999999999
Q ss_pred CCEEEEEEeeeCccccc--Cc-------hHHHHHH-hhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 220 GSLYVSYEWVTTDKYEA--EN-------KEHVDII-QGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 220 gG~l~~~~~~~~~~~~~--~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
||++++.++........ .. .....+. ..+..+. .+.+.+++.++|+++||++++...+.
T Consensus 187 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 187 DGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGG---RLPSTEMMVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp TCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTC---CCCCHHHHHHHHHHTTCBCCCCEECH
T ss_pred CcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCC---cCCCHHHHHHHHHhCCCEEEEEEecc
Confidence 99999988765432110 00 0011111 1222211 45589999999999999999887763
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.94 E-value=1.8e-25 Score=197.37 Aligned_cols=166 Identities=20% Similarity=0.262 Sum_probs=132.3
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
.+.++..+...++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.++++....+++ ++.++++|+.++++++++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~ 103 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDER 103 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTC
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCC
Confidence 3556677777889999999999999999999864 59999999999999999999887765 799999999999998899
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
||+|++..+++|++|+..+|+++.++|||||++++.++..... ............... ......++..++.++|+++
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a 180 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN--DAFDVFYNYVEKERD-YSHHRAWKKSDWLKMLEEA 180 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS--HHHHHHHHHHHHHHC-TTCCCCCBHHHHHHHHHHH
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC--HHHHHHHHHHHHhcC-ccccCCCCHHHHHHHHHHC
Confidence 9999999999999999999999999999999999987654321 000111111111111 1223457889999999999
Q ss_pred CCeEEEEEecC
Q 018194 271 GFEVVKEKDLA 281 (359)
Q Consensus 271 GF~~i~~~~~~ 281 (359)
||+++......
T Consensus 181 Gf~~~~~~~~~ 191 (260)
T 1vl5_A 181 GFELEELHCFH 191 (260)
T ss_dssp TCEEEEEEEEE
T ss_pred CCeEEEEEEee
Confidence 99998877653
No 7
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.94 E-value=4.2e-26 Score=206.93 Aligned_cols=230 Identities=20% Similarity=0.253 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHhhhcCCccccccchhhHH-HHhhhhhHHHHHhhcCCc-eeecCCCCCCCHHHHHHHHHHHHHHhcC-C
Q 018194 44 AEEVEDNYKEYWKFFKRPKETTKEKVPDFV-DTFYNLVTDIYEWGWGQS-FHFSPSIPGKSHRDATRLHEEMAVDLID-V 120 (359)
Q Consensus 44 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~v-~~~yd~~~~~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 120 (359)
+..+...+..|++...... .......+.+ ..+|+...++|..+.+.. +.|....... .........+.+++.+. +
T Consensus 38 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~i~~~~y~~~~~~~~~~~~~~~~~y~~~~f~~-~~~~~~~~~~~l~~~l~~~ 115 (312)
T 3vc1_A 38 ATPYQEDIARYWNNEARPV-NLRLGDVDGLYHHHYGIGPVDRAALGDPEHSEYEKKVIAE-LHRLESAQAEFLMDHLGQA 115 (312)
T ss_dssp SSHHHHHHHHHHHHCCCHH-HHHHHTTTTCCCCSCCCSCCCHHHHCCTTSTTHHHHHHHH-HHHHHHHHHHHHHTTSCCC
T ss_pred cchhhHHHHHHHhcccccc-hhhcccccchhhhhcCCchhHHHhhcCCCccccchHHHhh-hhhHHHHHHHHHHHHhccC
Confidence 3455566666666543111 1111111122 345665555555443322 2222111101 22233334456777777 8
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++.+|||+|||+|.++..+++..+++|+|+|+|+.+++.|+++....++.++++++++|+.++++++++||+|++..++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 88999999999999999999986578999999999999999999999998889999999999998888999999999999
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
+|+ ++..+++++.++|||||++++.++.....+.........+...+. +.+.+.+++.++|+++||++++.+++
T Consensus 196 ~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 196 MYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFE-----CNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp GGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHT-----CCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred hhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhc-----CCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 999 699999999999999999999988776655344334333333332 24678999999999999999999887
Q ss_pred C
Q 018194 281 A 281 (359)
Q Consensus 281 ~ 281 (359)
.
T Consensus 270 ~ 270 (312)
T 3vc1_A 270 T 270 (312)
T ss_dssp H
T ss_pred C
Confidence 4
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.94 E-value=2.4e-24 Score=191.03 Aligned_cols=162 Identities=21% Similarity=0.294 Sum_probs=134.5
Q ss_pred HHHHHhcC-CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLID-VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..++..+. +.++.+|||||||+|.++..+++.++++|+|+|+|+.+++.++++....+++++++++++|+.++++++++
T Consensus 35 ~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 114 (267)
T 3kkz_A 35 LKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEE 114 (267)
T ss_dssp HHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCC
Confidence 33455554 67889999999999999999999866799999999999999999999999888899999999999888899
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
||+|++..+++|+ ++..+++++.++|||||++++.+....... ........+... .+.+.+..++.++|+++
T Consensus 115 fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~a 186 (267)
T 3kkz_A 115 LDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDE--RPAEINDFWMDA-----YPEIDTIPNQVAKIHKA 186 (267)
T ss_dssp EEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSC--CCHHHHHHHHHH-----CTTCEEHHHHHHHHHHT
T ss_pred EEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCC--ChHHHHHHHHHh-----CCCCCCHHHHHHHHHHC
Confidence 9999999999999 899999999999999999999876543211 112222222111 23567889999999999
Q ss_pred CCeEEEEEecC
Q 018194 271 GFEVVKEKDLA 281 (359)
Q Consensus 271 GF~~i~~~~~~ 281 (359)
||++++...+.
T Consensus 187 Gf~~v~~~~~~ 197 (267)
T 3kkz_A 187 GYLPVATFILP 197 (267)
T ss_dssp TEEEEEEEECC
T ss_pred CCEEEEEEECC
Confidence 99999988764
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.93 E-value=1.3e-24 Score=192.29 Aligned_cols=164 Identities=23% Similarity=0.312 Sum_probs=134.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.+++.+.+.++.+|||||||+|.++..+++..+++|+|+|+|+.+++.++++.... .+++++++|+.++++++
T Consensus 42 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~ 118 (266)
T 3ujc_A 42 EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPE 118 (266)
T ss_dssp HHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCT
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCC
Confidence 345667778888899999999999999999999865789999999999999999876543 57999999999998888
Q ss_pred CccceEEeccccccc--CCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 018194 189 NHFDGAYSIEATCHA--PKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEI 266 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
++||+|++..+++|+ +++..+++++.++|||||++++.++...... ............. ...+.+.+++.++
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 192 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE-NWDDEFKEYVKQR-----KYTLITVEEYADI 192 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-GCCHHHHHHHHHH-----TCCCCCHHHHHHH
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-cchHHHHHHHhcC-----CCCCCCHHHHHHH
Confidence 999999999999999 7899999999999999999999887665411 1222222222111 1245689999999
Q ss_pred HHhCCCeEEEEEecC
Q 018194 267 AKRVGFEVVKEKDLA 281 (359)
Q Consensus 267 l~~aGF~~i~~~~~~ 281 (359)
|+++||++++...+.
T Consensus 193 l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 193 LTACNFKNVVSKDLS 207 (266)
T ss_dssp HHHTTCEEEEEEECH
T ss_pred HHHcCCeEEEEEeCC
Confidence 999999999988763
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.93 E-value=2.3e-24 Score=189.87 Aligned_cols=162 Identities=20% Similarity=0.271 Sum_probs=133.3
Q ss_pred HHHHHhc-CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLI-DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..++..+ .+.++.+|||||||+|.++..+++..+++|+|+|+|+.+++.++++....++.++++++++|+.++++++++
T Consensus 35 ~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 114 (257)
T 3f4k_A 35 RKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEE 114 (257)
T ss_dssp HHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTC
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCC
Confidence 3344444 667889999999999999999999755699999999999999999999999888899999999999988899
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
||+|++..+++|+ ++..+++++.++|||||++++.+....... ........+... .+.+.+..++.++|+++
T Consensus 115 fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~a 186 (257)
T 3f4k_A 115 LDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSE--RPAEIEDFWMDA-----YPEISVIPTCIDKMERA 186 (257)
T ss_dssp EEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSC--CCHHHHHHHHHH-----CTTCCBHHHHHHHHHHT
T ss_pred EEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCC--ChHHHHHHHHHh-----CCCCCCHHHHHHHHHHC
Confidence 9999999999999 899999999999999999999875533211 112222222221 23467899999999999
Q ss_pred CCeEEEEEecC
Q 018194 271 GFEVVKEKDLA 281 (359)
Q Consensus 271 GF~~i~~~~~~ 281 (359)
||++++...+.
T Consensus 187 Gf~~v~~~~~~ 197 (257)
T 3f4k_A 187 GYTPTAHFILP 197 (257)
T ss_dssp TEEEEEEEECC
T ss_pred CCeEEEEEECC
Confidence 99999987764
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.93 E-value=5e-24 Score=187.62 Aligned_cols=165 Identities=18% Similarity=0.193 Sum_probs=135.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.++..+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.++++....++.++++++++|+.++++ +
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~ 101 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-N 101 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-S
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-C
Confidence 345566777888899999999999999999999876789999999999999999999988887789999999999887 7
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|++..+++|++++..+|++++++|||||++++.+....... .... +...+ .......+.+..++.++|+
T Consensus 102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~--~~~~---~~~~~-~~~~~~~~~~~~~~~~~l~ 175 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLP--ATEE---IAQAC-GVSSTSDFLTLPGLVGAFD 175 (256)
T ss_dssp SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCC--SSHH---HHHTT-TCSCGGGSCCHHHHHHHHH
T ss_pred CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCC--ChHH---HHHHH-hcccccccCCHHHHHHHHH
Confidence 8999999999999999999999999999999999999875443211 1111 11111 1222335678999999999
Q ss_pred hCCCeEEEEEec
Q 018194 269 RVGFEVVKEKDL 280 (359)
Q Consensus 269 ~aGF~~i~~~~~ 280 (359)
++||++++....
T Consensus 176 ~aGf~~~~~~~~ 187 (256)
T 1nkv_A 176 DLGYDVVEMVLA 187 (256)
T ss_dssp TTTBCCCEEEEC
T ss_pred HCCCeeEEEEeC
Confidence 999999887554
No 12
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.93 E-value=3.8e-25 Score=195.50 Aligned_cols=157 Identities=18% Similarity=0.254 Sum_probs=119.8
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. .+...++++.++|+.++++++++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 5678899999999999999999986 689999999999999999887 2234579999999999988889999999999
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEEeeeCccccc---CchHHHHHHhhhhcC-CCCCCCCCHHHHHHHHHhCCCeE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEA---ENKEHVDIIQGIERG-DALPGLRSYAEITEIAKRVGFEV 274 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aGF~~ 274 (359)
+++|++++..+++++.++|||||++++. +...+. .. ............... .......+..++.++|+++||++
T Consensus 113 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 190 (263)
T 2yqz_A 113 LWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEA-SPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKP 190 (263)
T ss_dssp CGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECC-CHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred chhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCc-cHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999987 333210 00 001111122111100 00112446788999999999998
Q ss_pred EEEEec
Q 018194 275 VKEKDL 280 (359)
Q Consensus 275 i~~~~~ 280 (359)
+.....
T Consensus 191 ~~~~~~ 196 (263)
T 2yqz_A 191 RTREVA 196 (263)
T ss_dssp EEEEEE
T ss_pred ceEEEe
Confidence 766443
No 13
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.92 E-value=2.4e-24 Score=191.92 Aligned_cols=244 Identities=18% Similarity=0.197 Sum_probs=158.1
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 186 (359)
+.+...+.....+.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.++++....+++ ++++..+|+.++++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~ 101 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF 101 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC
Confidence 344455566667788999999999999999999985 4689999999999999999999888764 79999999999988
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcc-cccCchHHHHHHhhhhcC--CCCCCCCCHHHH
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDK-YEAENKEHVDIIQGIERG--DALPGLRSYAEI 263 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 263 (359)
++++||+|++..+++|++++..+++++.++|||||++++.+...... +.+.......++...... .......+..++
T Consensus 102 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQI 181 (276)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGH
T ss_pred CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHH
Confidence 88999999999999999999999999999999999999987544221 112222222222111110 001123456789
Q ss_pred HHHHHhCCCeEEEEEecCCCCCCchhhhhhccchhHHHHHHHHHHHHH-hccCCCCcHHHHHHHHHHHHHHHhcCccccc
Q 018194 264 TEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAA-LGIAPKGTVGVHDMLFKTADYLTRGGETGIF 342 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 342 (359)
.++|+++||++++.+....+. .++..........+.+...+...... ......+.+++...+.+..+...+ +..-.+
T Consensus 182 ~~~l~~aGf~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~g~~~~ 259 (276)
T 3mgg_A 182 YPLLQESGFEKIRVEPRMVYI-DSSKPELVDGFILKTIIPMVEGVKEQSLKMQIIKEEEWEKGIEELHKTAEH-GGTFCY 259 (276)
T ss_dssp HHHHHHTTCEEEEEEEEEEEE-CTTCHHHHHHTTTTTHHHHHHTTHHHHHHTTSSCHHHHHHHHHHHHHTTST-TCEEEE
T ss_pred HHHHHHCCCCeEEEeeEEEEC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccCC-CeEEEE
Confidence 999999999999987653221 11111110000011111111111111 111223455566666666554333 333334
Q ss_pred cceeeEEEecCC
Q 018194 343 TPMHMVLLRKPH 354 (359)
Q Consensus 343 ~~~~~v~arKP~ 354 (359)
+....+.+|||.
T Consensus 260 tf~~~~~~~~~~ 271 (276)
T 3mgg_A 260 TFFKGWGTKEGH 271 (276)
T ss_dssp EEEEEEEEC---
T ss_pred EEEEEEEecccc
Confidence 445669999996
No 14
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.92 E-value=3.5e-24 Score=191.18 Aligned_cols=224 Identities=18% Similarity=0.195 Sum_probs=149.4
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccc
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFD 192 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 192 (359)
.+++.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.|++.++++. +++.+..+|+.++++ +++||
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD 119 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV-DKPLD 119 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC-SSCEE
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc-CCCcC
Confidence 455666777889999999999999999998 6789999999999999998874 468999999999887 57999
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhc----CCCCCCCCCHHHHHHHHH
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIER----GDALPGLRSYAEITEIAK 268 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~ 268 (359)
+|++..+++|++|+..+++++.++|||||++++..+.... ................. ......+.+.+++.++|+
T Consensus 120 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGN-IKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILE 198 (279)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTT-THHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHH
T ss_pred EEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcc-hHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHH
Confidence 9999999999999999999999999999999987544321 10000111111111100 011124568999999999
Q ss_pred hCCCeEEEEEecCCCCCCchhhhhhccchhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHH----hcCccccccc
Q 018194 269 RVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLT----RGGETGIFTP 344 (359)
Q Consensus 269 ~aGF~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~ 344 (359)
++||+++..+.+..+...+ .. ...+..|+........ ..+ ..++...++.++.+.+. +++.....+.
T Consensus 199 ~aGf~~~~~~~~~~~~~~~--~~--~~~~~~~l~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 269 (279)
T 3ccf_A 199 KQGFDVTYAALFNRPTTLA--EG--EFGMANWIQMFASAFL--VGL---TPDQQVQLIRKVEATLQDKLYHQESWTADYR 269 (279)
T ss_dssp HHTEEEEEEEEEECCEECS--SG--GGHHHHHHHHHCHHHH--TTC---CHHHHHHHHHHHHHHHHHHHEETTEEEECCE
T ss_pred HcCCEEEEEEEeccccccc--CC--HHHHHHHHHHhhHHHh--ccC---CHHHHHHHHHHHHHHHHhhccCCCcEEEEEE
Confidence 9999999887664322111 00 1123334432221111 112 22233333333333332 2355666667
Q ss_pred eeeEEEecCC
Q 018194 345 MHMVLLRKPH 354 (359)
Q Consensus 345 ~~~v~arKP~ 354 (359)
.++++||||.
T Consensus 270 ~~~v~a~Kp~ 279 (279)
T 3ccf_A 270 RIRIVSIKAQ 279 (279)
T ss_dssp EEEEEEEEC-
T ss_pred EEEEEEecCC
Confidence 8889999983
No 15
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.92 E-value=7.3e-24 Score=189.67 Aligned_cols=168 Identities=12% Similarity=0.153 Sum_probs=129.6
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~ 190 (359)
..++..+... +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....++.++++++++|+.+++ +++++
T Consensus 59 ~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 136 (285)
T 4htf_A 59 DRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETP 136 (285)
T ss_dssp HHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSC
T ss_pred HHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCC
Confidence 3444545543 679999999999999999987 78999999999999999999988888778999999999987 77899
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccC--chHHHHHHhhhhc----CCCCCCCCCHHHHH
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAE--NKEHVDIIQGIER----GDALPGLRSYAEIT 264 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 264 (359)
||+|++..+++|++++..+++++.++|||||++++.++......... ......+...... ......+++.+++.
T Consensus 137 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 216 (285)
T 4htf_A 137 VDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVY 216 (285)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHH
T ss_pred ceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999765442210000 0001111111111 11122467899999
Q ss_pred HHHHhCCCeEEEEEecC
Q 018194 265 EIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 265 ~~l~~aGF~~i~~~~~~ 281 (359)
++|+++||++++...+.
T Consensus 217 ~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 217 LWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHHHTTCEEEEEEEES
T ss_pred HHHHHCCCceeeeeeEE
Confidence 99999999999988874
No 16
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.92 E-value=2.6e-24 Score=190.10 Aligned_cols=209 Identities=18% Similarity=0.134 Sum_probs=152.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.+.+.++..++.+|||||||+|.++..+++ ++.+|+|+|+|+.|++.++++. +++++++|+.++++++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCC
Confidence 3556677777888899999999999999999998 5789999999999998876542 7999999999999888
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCc-hHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAEN-KEHVDIIQGIERGDALPGLRSYAEITEIA 267 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (359)
++||+|++..+++|++++..++++++++|| ||++++.++.......... .......... ...+.+.+++. +|
T Consensus 93 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~l 165 (261)
T 3ege_A 93 KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDA-----LRFLPLDEQIN-LL 165 (261)
T ss_dssp TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHH-----HTSCCHHHHHH-HH
T ss_pred CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhh-----hhhCCCHHHHH-HH
Confidence 999999999999999999999999999999 9999998876532221111 1111111111 11345678888 99
Q ss_pred HhCCCeEEEEEecCCCCCCchh--hhhhccchhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHh
Q 018194 268 KRVGFEVVKEKDLAKPPAQPWW--TRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTR 335 (359)
Q Consensus 268 ~~aGF~~i~~~~~~~~~~~~w~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 335 (359)
+++||++++...+..+ ...|. .+......+.|+........+.+... ..+++...+.++.+++..
T Consensus 166 ~~aGF~~v~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~e~~~~~~~~~~~l~~ 232 (261)
T 3ege_A 166 QENTKRRVEAIPFLLP-HDLSDLFAAAAWRRPELYLKAEVRAGISSFALA--NQDLVEKGLELLTADLNN 232 (261)
T ss_dssp HHHHCSEEEEEECCEE-TTCSBCCTTTTTTCGGGGGSHHHHHTSHHHHHS--CHHHHHHHHHHHHHHHHT
T ss_pred HHcCCCceeEEEecCC-CcCcchhhHHhccCchhhcCcchhccccceeec--CHHHHHHHHHHHHHHHhc
Confidence 9999999998877432 23332 44455556666655555444444332 456677777777777653
No 17
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.91 E-value=4.2e-23 Score=179.90 Aligned_cols=163 Identities=17% Similarity=0.240 Sum_probs=133.5
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
...++..+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+++ ++++.++|+.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTC
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCc
Confidence 355677788889999999999999999999986 469999999999999999998887764 799999999999988899
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHH---hhhhcCCCCCCCCCHHHHHHHH
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDII---QGIERGDALPGLRSYAEITEIA 267 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 267 (359)
||+|++..+++|++++..+++++.++|||||++++.+...... .....+. ...... .....++..++.++|
T Consensus 88 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll 161 (239)
T 1xxl_A 88 FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED-----PVLDEFVNHLNRLRDP-SHVRESSLSEWQAMF 161 (239)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS-----HHHHHHHHHHHHHHCT-TCCCCCBHHHHHHHH
T ss_pred EEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC-----hhHHHHHHHHHHhccc-cccCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999987654321 1121111 111112 223456899999999
Q ss_pred HhCCCeEEEEEecC
Q 018194 268 KRVGFEVVKEKDLA 281 (359)
Q Consensus 268 ~~aGF~~i~~~~~~ 281 (359)
+++||+++......
T Consensus 162 ~~aGf~~~~~~~~~ 175 (239)
T 1xxl_A 162 SANQLAYQDIQKWN 175 (239)
T ss_dssp HHTTEEEEEEEEEE
T ss_pred HHCCCcEEEEEeec
Confidence 99999998877653
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.91 E-value=4.3e-23 Score=181.65 Aligned_cols=155 Identities=14% Similarity=0.241 Sum_probs=119.9
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEe
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYS 196 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~ 196 (359)
++++.+|||||||+|..+..+++. ++++|+|+|+|+.|++.|++++...+...+++++++|+.++++ +.||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--ccccccee
Confidence 568899999999999999999874 5689999999999999999999988888899999999999875 46999999
Q ss_pred cccccccCC--HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCC---------------CCCCCC
Q 018194 197 IEATCHAPK--LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDA---------------LPGLRS 259 (359)
Q Consensus 197 ~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 259 (359)
..+++|+++ ...+|++++++|||||++++.+......... ......+...+....+ .....+
T Consensus 146 ~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 146 NFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKV-GELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHH-HHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 999999974 5679999999999999999988655322110 0011111111100000 112457
Q ss_pred HHHHHHHHHhCCCeEEEE
Q 018194 260 YAEITEIAKRVGFEVVKE 277 (359)
Q Consensus 260 ~~~~~~~l~~aGF~~i~~ 277 (359)
.+++.++|+++||+.+++
T Consensus 225 ~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 225 VETHKARLHKAGFEHSEL 242 (261)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCeEEE
Confidence 889999999999998875
No 19
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=5.6e-23 Score=181.16 Aligned_cols=156 Identities=11% Similarity=0.064 Sum_probs=120.0
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..++..+...++.+|||||||+|.++..+++. ++.+|+|+|+|+.|++.++++ ..++++.++|+.+++ ++++
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~-~~~~ 95 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK-PAQK 95 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC-CSSC
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC-ccCC
Confidence 45667777788899999999999999999885 578999999999999999887 246899999999988 7789
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHh-----hhhcC--CCCCCCCCHHHH
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQ-----GIERG--DALPGLRSYAEI 263 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~ 263 (359)
||+|++..+++|++++..+++++.++|||||++++..+..... ........... ....+ .....+.+.+++
T Consensus 96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (259)
T 2p35_A 96 ADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE--PTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDY 173 (259)
T ss_dssp EEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS--HHHHHHHHHHHHSTTGGGC-------CCCCCHHHH
T ss_pred cCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc--HHHHHHHHHhcCcchHHHhccccccccCCCCHHHH
Confidence 9999999999999999999999999999999999976533210 00011111111 01111 112356789999
Q ss_pred HHHHHhCCCeEEE
Q 018194 264 TEIAKRVGFEVVK 276 (359)
Q Consensus 264 ~~~l~~aGF~~i~ 276 (359)
.++|+++||++..
T Consensus 174 ~~~l~~aGf~v~~ 186 (259)
T 2p35_A 174 FNALSPKSSRVDV 186 (259)
T ss_dssp HHHHGGGEEEEEE
T ss_pred HHHHHhcCCceEE
Confidence 9999999997543
No 20
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.90 E-value=8.9e-22 Score=175.07 Aligned_cols=180 Identities=18% Similarity=0.178 Sum_probs=139.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHH------HHHHHHHHHHHcCCCCC
Q 018194 102 SHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEY------QVNRARLHNKKAGLDSL 173 (359)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~------~~~~a~~~~~~~~~~~~ 173 (359)
.+..++......++..+.+.++.+|||||||+|.++..+++.. ..+|+|+|+|+. +++.++++....++.++
T Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~ 102 (275)
T 3bkx_A 23 TIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDR 102 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGG
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCc
Confidence 3556677777888888888999999999999999999999863 379999999997 99999999988777678
Q ss_pred eEEEEcC---CCCCCCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHH-HHHHh---
Q 018194 174 CEVVCGN---FLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH-VDIIQ--- 246 (359)
Q Consensus 174 i~~~~~d---~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-~~~~~--- 246 (359)
+++..+| ...+++++++||+|++..+++|++++..+++.+.++++|||++++.++............. ..+..
T Consensus 103 v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (275)
T 3bkx_A 103 LTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLL 182 (275)
T ss_dssp EEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHH
T ss_pred eEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHH
Confidence 9999998 4455667889999999999999999988888888888889999998877643322111111 11111
Q ss_pred -hhhc--CCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 247 -GIER--GDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 247 -~~~~--~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
.... ......+.+.+++.++|+++||++++...+.
T Consensus 183 ~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~ 220 (275)
T 3bkx_A 183 YAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVE 220 (275)
T ss_dssp HHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBC
T ss_pred hhccccccccccccCCHHHHHHHHHHCCCeeEEEEEec
Confidence 1111 1222346799999999999999999987773
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.90 E-value=4.8e-23 Score=176.65 Aligned_cols=169 Identities=16% Similarity=0.169 Sum_probs=132.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
....+.+++.+...++ +|||+|||+|.++..+++.++.+|+|+|+|+.+++.++++....++.++++++++|+.+++++
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 3445666777777777 999999999999999998767899999999999999999999988878999999999999988
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCC-----CCCCCCCHHH
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGD-----ALPGLRSYAE 262 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 262 (359)
+++||+|++..+++|++++..+++++.++|||||++++.+......... ............. .....++.++
T Consensus 109 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRD---SISAEMIRKNPDWKEFNRKNISQENVER 185 (219)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHH---HHHHHHHHHCTTHHHHHHHHSSHHHHHH
T ss_pred cccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHH---HHHHHHHHhHHHHHhhhhhccccCCHHH
Confidence 8999999999999999999999999999999999999976443321110 0000000000000 0012346789
Q ss_pred HHHHHHhCCCeEEEEEec
Q 018194 263 ITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 263 ~~~~l~~aGF~~i~~~~~ 280 (359)
+.++|+++||++++....
T Consensus 186 ~~~~l~~aGf~~v~~~~~ 203 (219)
T 3dlc_A 186 FQNVLDEIGISSYEIILG 203 (219)
T ss_dssp HHHHHHHHTCSSEEEEEE
T ss_pred HHHHHHHcCCCeEEEEec
Confidence 999999999999887654
No 22
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.90 E-value=2.1e-22 Score=172.95 Aligned_cols=154 Identities=24% Similarity=0.285 Sum_probs=132.1
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
+.++..+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++....+++ ++++..+|+.+++++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCC
Confidence 44666677888999999999999999999985 3579999999999999999999888775 79999999999888889
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
+||+|++..+++|++++..+++++.++|||||++++.++....... +......++.+++.++|++
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK---------------GPPPEEVYSEWEVGLILED 170 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS---------------SCCGGGSCCHHHHHHHHHH
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc---------------CCchhcccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999998876543211 1112245688999999999
Q ss_pred CCCeEEEEEecC
Q 018194 270 VGFEVVKEKDLA 281 (359)
Q Consensus 270 aGF~~i~~~~~~ 281 (359)
+||++++...+.
T Consensus 171 ~Gf~~~~~~~~~ 182 (219)
T 3dh0_A 171 AGIRVGRVVEVG 182 (219)
T ss_dssp TTCEEEEEEEET
T ss_pred CCCEEEEEEeeC
Confidence 999999987764
No 23
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.89 E-value=2.6e-22 Score=175.53 Aligned_cols=152 Identities=12% Similarity=0.083 Sum_probs=118.6
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... +++++++|+.++ +++++||+|++.+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~~~~~fD~v~~~~~l 113 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-QLPRRYDNIVLTHVL 113 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-CCSSCEEEEEEESCG
T ss_pred cCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-CcCCcccEEEEhhHH
Confidence 46779999999999999999986 46999999999999999987532 699999999887 467899999999999
Q ss_pred cccCCHHHHHHHHH-hccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhc----------CCCCCCCCCHHHHHHHHHh
Q 018194 201 CHAPKLEDVYAEVF-RVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIER----------GDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 201 ~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~ 269 (359)
+|++++..+|+++. ++|||||++++.+...... ............ .......++.+++.++|++
T Consensus 114 ~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 188 (250)
T 2p7i_A 114 EHIDDPVALLKRINDDWLAEGGRLFLVCPNANAV-----SRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASR 188 (250)
T ss_dssp GGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCH-----HHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred HhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHH-----HHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHH
Confidence 99999999999999 9999999999976443211 000000000000 0112246789999999999
Q ss_pred CCCeEEEEEecCCCC
Q 018194 270 VGFEVVKEKDLAKPP 284 (359)
Q Consensus 270 aGF~~i~~~~~~~~~ 284 (359)
+||++++...+...+
T Consensus 189 ~Gf~~~~~~~~~~~p 203 (250)
T 2p7i_A 189 AGLQVTYRSGIFFKA 203 (250)
T ss_dssp TTCEEEEEEEEEECC
T ss_pred CCCeEEEEeeeEecC
Confidence 999999988765444
No 24
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.89 E-value=2.7e-22 Score=174.15 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=124.7
Q ss_pred HHHHHhcC-CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 112 EMAVDLID-VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 112 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
+.+...+. ..++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.++++....+ +++++++|+.+++++ +
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-~ 108 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-E 108 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC-S
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC-C
Confidence 44555554 567889999999999999999985 47899999999999999999876543 799999999998876 8
Q ss_pred ccceEEecccccccCCHH--HHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhh--------------hcCCC
Q 018194 190 HFDGAYSIEATCHAPKLE--DVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGI--------------ERGDA 253 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~ 253 (359)
+||+|++..+++|+++.. .++++++++|||||++++.++......... ......+... .....
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIE-NLNKTIWRQYVENSGLTEEEIAAGYERSK 187 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHH-HHHHHHHHHHHHTSSCCHHHHHTTC----
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhh-hHHHHHHHHHHHhcCCCHHHHHHHHHhcc
Confidence 999999999999998665 699999999999999999886654321111 0111111111 11112
Q ss_pred CCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 254 LPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 254 ~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
....++.+++.++|+++||++++....
T Consensus 188 ~~~~~~~~~~~~ll~~aGF~~v~~~~~ 214 (234)
T 3dtn_A 188 LDKDIEMNQQLNWLKEAGFRDVSCIYK 214 (234)
T ss_dssp CCCCCBHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccccCHHHHHHHHHHcCCCceeeeee
Confidence 334668899999999999999987554
No 25
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.89 E-value=4.3e-23 Score=175.21 Aligned_cols=180 Identities=17% Similarity=0.109 Sum_probs=136.1
Q ss_pred hHHHHhhhhhHHHHHhhcCCceeecCCCCCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEE
Q 018194 71 DFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVG 150 (359)
Q Consensus 71 ~~v~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g 150 (359)
+.+.++|+..+..|+..+.......+ .. ......+... .+.+|||+|||+|.++..+++. +.+|+|
T Consensus 3 ~~~~~~y~~~a~~y~~~~~~~~~~~~-----~~----~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~-~~~v~g 68 (203)
T 3h2b_A 3 DDVSKAYSSPTFDAEALLGTVISAED-----PD----RVLIEPWATG----VDGVILDVGSGTGRWTGHLASL-GHQIEG 68 (203)
T ss_dssp CHHHHHHHCTTTCHHHHTCSSCCTTC-----TT----HHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHT-TCCEEE
T ss_pred HHHHHHHhhHHHHHHHHhhhhccccH-----HH----HHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhc-CCeEEE
Confidence 45778888888888765543222111 11 1111222221 2779999999999999999986 679999
Q ss_pred EeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEe
Q 018194 151 ITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 151 ~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+|+|+.+++.++++. .+++++++|+.++++++++||+|++..+++|++ ++..+++++.++|||||++++..+
T Consensus 69 vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 69 LEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp ECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 999999999999873 368999999999888889999999999999997 899999999999999999999775
Q ss_pred eeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecCC
Q 018194 229 VTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAK 282 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~~ 282 (359)
...... .+.........++.+++.++|+++||++++......
T Consensus 143 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 143 SGPSLE------------PMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp CCSSCE------------EECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred cCCchh------------hhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 543210 011111122356889999999999999999988754
No 26
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.89 E-value=6.2e-22 Score=172.63 Aligned_cols=157 Identities=20% Similarity=0.276 Sum_probs=125.2
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
..+...+ .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ...+++++++|+.++++++++|
T Consensus 45 ~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~f 117 (242)
T 3l8d_A 45 PFFEQYV--KKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQF 117 (242)
T ss_dssp HHHHHHS--CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCE
T ss_pred HHHHHHc--CCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCc
Confidence 4444444 36789999999999999999986 779999999999999998774 2357999999999999888999
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCC
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVG 271 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 271 (359)
|+|++..+++|++++..+++++.++|||||++++.++........ ................++.++.++|+++|
T Consensus 118 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 191 (242)
T 3l8d_A 118 EAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRE------NSYPRLYGKDVVCNTMMPWEFEQLVKEQG 191 (242)
T ss_dssp EEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGG------GGGGGGGTCCCSSCCCCHHHHHHHHHHTT
T ss_pred cEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhh------hhhhhhccccccccCCCHHHHHHHHHHcC
Confidence 999999999999999999999999999999999987544321111 01111122222335678999999999999
Q ss_pred CeEEEEEecC
Q 018194 272 FEVVKEKDLA 281 (359)
Q Consensus 272 F~~i~~~~~~ 281 (359)
|++++...+.
T Consensus 192 f~~~~~~~~~ 201 (242)
T 3l8d_A 192 FKVVDGIGVY 201 (242)
T ss_dssp EEEEEEEEEE
T ss_pred CEEEEeeccc
Confidence 9999987663
No 27
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.2e-21 Score=176.45 Aligned_cols=165 Identities=12% Similarity=0.183 Sum_probs=122.9
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHh--hcCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCCCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAA--HSRANVVGITINEYQVNRARLHNKKA-GLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~ 188 (359)
+.+..... .++.+|||||||+|.++..+++ .++.+|+|+|+|+.+++.|+++.... +...+++++++|+.++++++
T Consensus 27 ~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 105 (299)
T 3g5t_A 27 KMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG 105 (299)
T ss_dssp HHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC
T ss_pred HHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc
Confidence 34444433 5788999999999999999996 35789999999999999999998876 44578999999999988777
Q ss_pred ------CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcc--cccCchHHHHHHhhhhcCCCCCCC--C
Q 018194 189 ------NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDK--YEAENKEHVDIIQGIERGDALPGL--R 258 (359)
Q Consensus 189 ------~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~ 258 (359)
++||+|++..+++|+ ++..+++++.++|||||.+++.++..... ..........+... .....+.. .
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~w~~p 182 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYG--KQGLGPYWEQP 182 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHC--TTTTGGGSCTT
T ss_pred cccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccC--cccccchhhch
Confidence 899999999999999 99999999999999999999866543211 11111222222111 00111111 3
Q ss_pred CHHHHHHHHHhCCC-----eEEEEEec
Q 018194 259 SYAEITEIAKRVGF-----EVVKEKDL 280 (359)
Q Consensus 259 ~~~~~~~~l~~aGF-----~~i~~~~~ 280 (359)
..+.+.+.++++|| +.++...+
T Consensus 183 ~~~~~~~~l~~~gfp~~~f~~v~~~~~ 209 (299)
T 3g5t_A 183 GRSRLRNMLKDSHLDPELFHDIQVSYF 209 (299)
T ss_dssp HHHHHHTTTTTCCCCTTTEEEEEEEEE
T ss_pred hhHHHHHhhhccCCChHHcCcceEEEe
Confidence 45677899999999 67766665
No 28
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.88 E-value=2.9e-22 Score=186.57 Aligned_cols=155 Identities=19% Similarity=0.275 Sum_probs=124.2
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHc-----C-C-CCCeEEEEcCCCCC------
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKA-----G-L-DSLCEVVCGNFLKM------ 184 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~-----~-~-~~~i~~~~~d~~~~------ 184 (359)
..++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.++++.... | . ..+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 557889999999999999999985 5679999999999999999987654 2 2 25899999999987
Q ss_pred CCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHH
Q 018194 185 PFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEIT 264 (359)
Q Consensus 185 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (359)
++++++||+|+++.+++|++++..+|++++++|||||++++.++............. ....+.......+.+++.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 235 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQD-----PILYGECLGGALYLEDFR 235 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHC-----HHHHHTTCTTCCBHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhh-----HHHhhcccccCCCHHHHH
Confidence 888899999999999999999999999999999999999998876643322111111 111122233566889999
Q ss_pred HHHHhCCCeEEEEEe
Q 018194 265 EIAKRVGFEVVKEKD 279 (359)
Q Consensus 265 ~~l~~aGF~~i~~~~ 279 (359)
++|+++||++++...
T Consensus 236 ~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 236 RLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHTTCCCEEEEE
T ss_pred HHHHHCCCceEEEEe
Confidence 999999999876554
No 29
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.88 E-value=1.5e-21 Score=174.55 Aligned_cols=217 Identities=12% Similarity=0.049 Sum_probs=148.2
Q ss_pred cCCCCCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEE
Q 018194 118 IDVKAGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAY 195 (359)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~ 195 (359)
..+.++.+|||||||+|.++..+++. + +++|+|+|+|+.+++.++++....+ .++++.++|+.+++++ ++||+|+
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~~-~~fD~v~ 94 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGDATEIELN-DKYDIAI 94 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESCTTTCCCS-SCEEEEE
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcchhhcCcC-CCeeEEE
Confidence 36678899999999999999999985 4 4799999999999999999987654 3799999999998874 6999999
Q ss_pred ecccccccCCHHHHHHHHHhccCCCCEEEEEEee-----eCcccccCc-------hHHHHHHhhhhcCCCCCCCCCHHHH
Q 018194 196 SIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWV-----TTDKYEAEN-------KEHVDIIQGIERGDALPGLRSYAEI 263 (359)
Q Consensus 196 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (359)
+..+++|++++..++++++++|||||++++.+.. ......... ..+...........+ ..+.+..++
T Consensus 95 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 173 (284)
T 3gu3_A 95 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNG-KDGNIGMKI 173 (284)
T ss_dssp EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTC-CCTTGGGTH
T ss_pred ECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhc-ccccHHHHH
Confidence 9999999999999999999999999999998765 111111110 111111111111111 134456789
Q ss_pred HHHHHhCCCeEEEEEecCC---CCCCchhhhh-----hccchhHHH-HHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHH
Q 018194 264 TEIAKRVGFEVVKEKDLAK---PPAQPWWTRL-----KMGRFAYWR-NHILVTILAALGIAPKGTVGVHDMLFKTADYLT 334 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~~~---~~~~~w~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 334 (359)
.++|+++||+.++...... .+...|..+. .....+.|. ...+....+.+--...+.+++..++.+.++.+.
T Consensus 174 ~~~l~~aGF~~v~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~G~~~~~~~~~~~~~~l~~~g~~~~e~~~~~~~~~~~~~ 253 (284)
T 3gu3_A 174 PIYLSELGVKNIECRVSDKVNFLDSNMHHNDKNDLYQSLKEEGIAGDPGDKQQFVERLIARGLTYDNALAQYEAELRFFK 253 (284)
T ss_dssp HHHHHHTTCEEEEEEECCCCEEECTTCCSHHHHHHHHHHHHTTTTCCCCCHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEcCCccccCCCCChHHHHHHHHHHHhccccCCcccHHHHHHHHHHccccHHHHHHHHHHHHHHHH
Confidence 9999999999998754322 1234554433 122222111 011122222222223467888999999998887
Q ss_pred hcCc
Q 018194 335 RGGE 338 (359)
Q Consensus 335 ~~~~ 338 (359)
+.+.
T Consensus 254 ~~~~ 257 (284)
T 3gu3_A 254 ALHL 257 (284)
T ss_dssp HCCT
T ss_pred Hhcc
Confidence 5543
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.88 E-value=5.6e-22 Score=172.98 Aligned_cols=147 Identities=16% Similarity=0.181 Sum_probs=119.7
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++....+ ..++.++.+|+.++++++++||+|++..++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 3678999999999999999988655699999999999999999887654 246899999999888877899999999999
Q ss_pred cccCC--HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 201 CHAPK--LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 201 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
+|+++ ...+++++.++|||||++++.+...... ............+.+++.++|+++||++++..
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG-------------VILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS-------------EEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc-------------ceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 99987 4499999999999999999987655420 00000111123478999999999999999988
Q ss_pred ecC
Q 018194 279 DLA 281 (359)
Q Consensus 279 ~~~ 281 (359)
...
T Consensus 224 ~~~ 226 (241)
T 2ex4_A 224 RQE 226 (241)
T ss_dssp ECC
T ss_pred ecC
Confidence 764
No 31
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.88 E-value=2.9e-22 Score=172.19 Aligned_cols=155 Identities=17% Similarity=0.144 Sum_probs=119.4
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccce
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDG 193 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 193 (359)
+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. .+++++++|+.+++++ ++||+
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~ 109 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDT 109 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSE
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEE
Confidence 334444457889999999999999999986 6899999999999999998754 4689999999998877 89999
Q ss_pred EEecccccccCCHHH--HHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCC--------CCCCCCCHHHH
Q 018194 194 AYSIEATCHAPKLED--VYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGD--------ALPGLRSYAEI 263 (359)
Q Consensus 194 v~~~~~l~~~~~~~~--~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 263 (359)
|++..+++|+++... +++++.++|||||.+++.+....... ............. ....+.+.+++
T Consensus 110 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (220)
T 3hnr_A 110 IVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQD-----AYDKTVEAAKQRGFHQLANDLQTEYYTRIPVM 184 (220)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHH-----HHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHH
T ss_pred EEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChH-----HHHHHHHHHHhCCCccchhhcchhhcCCHHHH
Confidence 999999999998876 99999999999999999874432211 1111111110000 01134588999
Q ss_pred HHHHHhCCCeEEEEEec
Q 018194 264 TEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~ 280 (359)
.++|+++||+++.....
T Consensus 185 ~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 185 QTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHTTEEEEEEECS
T ss_pred HHHHHHCCCEEEEeecc
Confidence 99999999998876543
No 32
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.88 E-value=8.3e-22 Score=168.94 Aligned_cols=158 Identities=16% Similarity=0.226 Sum_probs=117.9
Q ss_pred HHHHhc-CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 113 MAVDLI-DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 113 ~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
.+...+ ...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++ .+. .+++++++|+.++ +++++|
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCE
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCce
Confidence 344444 3667889999999999999999987 6799999999999999987 333 4799999999987 678899
Q ss_pred ceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHH-HHh---h-hhcCCC---CCCCCCHH
Q 018194 192 DGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVD-IIQ---G-IERGDA---LPGLRSYA 261 (359)
Q Consensus 192 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~---~-~~~~~~---~~~~~~~~ 261 (359)
|+|++..+++|+++. ..+++++.++|||||.+++.++......... .... ... . +..+.. ...+.+.+
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQ--QDDSEPEVAVRRTLQDGRSFRIVKVFRSPA 186 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC--------------CEEEEECTTSCEEEEECCCCCHH
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccch--hhhcccccceeeecCCcchhhHhhcCCCHH
Confidence 999999999999975 8999999999999999999876653211100 0000 000 0 000000 12356899
Q ss_pred HHHHHHHhCCCeEEEEEe
Q 018194 262 EITEIAKRVGFEVVKEKD 279 (359)
Q Consensus 262 ~~~~~l~~aGF~~i~~~~ 279 (359)
++.++|+++||++...+.
T Consensus 187 ~~~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 187 ELTERLTALGWSCSVDEV 204 (218)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEeeec
Confidence 999999999999665544
No 33
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.88 E-value=1.2e-21 Score=176.94 Aligned_cols=161 Identities=17% Similarity=0.197 Sum_probs=128.1
Q ss_pred CCCCCCEEEEECCCCChHHHHHH--hhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEe
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIA--AHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYS 196 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~--~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~ 196 (359)
.+.++.+|||||||+|..+..++ ..++.+|+|+|+|+.+++.++++....++.++++++++|+.+++++ ++||+|++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 45678999999999999999985 3567899999999999999999998888877899999999998887 89999999
Q ss_pred cccccccCCHHH---HHHHHHhccCCCCEEEEEEeeeCcccccC--------ch---HHHHHHhhhhcCCCCCCCCCHHH
Q 018194 197 IEATCHAPKLED---VYAEVFRVLKPGSLYVSYEWVTTDKYEAE--------NK---EHVDIIQGIERGDALPGLRSYAE 262 (359)
Q Consensus 197 ~~~l~~~~~~~~---~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~ 262 (359)
..+++|++++.. +++++.++|||||++++.++......... .. .................+++.++
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 999999988775 79999999999999999876553221111 11 11111111111233446689999
Q ss_pred HHHHHHhCCCeEEEEEec
Q 018194 263 ITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 263 ~~~~l~~aGF~~i~~~~~ 280 (359)
+.++|+++||++++....
T Consensus 274 ~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHCCCEEEEEEcc
Confidence 999999999999998764
No 34
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.88 E-value=1.3e-21 Score=171.79 Aligned_cols=162 Identities=14% Similarity=0.092 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 018194 105 DATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM 184 (359)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 184 (359)
.........++..+...++.+|||||||+|.++..+++....+|+++|+|+.+++.++++.... .+++++++|+.++
T Consensus 76 ~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~ 152 (254)
T 1xtp_A 76 DVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA 152 (254)
T ss_dssp HHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC
T ss_pred HHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC
Confidence 3344445666777777788999999999999999998864568999999999999999887543 4799999999998
Q ss_pred CCCCCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHH
Q 018194 185 PFEDNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAE 262 (359)
Q Consensus 185 ~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (359)
++++++||+|++..+++|++ ++..+++++.++|||||++++.++....... ..........++.++
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~------------~~~~~~~~~~~~~~~ 220 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF------------LVDKEDSSLTRSDIH 220 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE------------EEETTTTEEEBCHHH
T ss_pred CCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc------------eecccCCcccCCHHH
Confidence 88888999999999999995 5889999999999999999998753321100 000111112458899
Q ss_pred HHHHHHhCCCeEEEEEecC
Q 018194 263 ITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 263 ~~~~l~~aGF~~i~~~~~~ 281 (359)
+.++|+++||++++.....
T Consensus 221 ~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 221 YKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHHHHHTCCEEEEEECT
T ss_pred HHHHHHHCCCEEEEeeecC
Confidence 9999999999999987763
No 35
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.87 E-value=1.8e-21 Score=169.70 Aligned_cols=144 Identities=20% Similarity=0.225 Sum_probs=116.2
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEec
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--PFEDNHFDGAYSI 197 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~v~~~ 197 (359)
+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ++++.+|+.+. ++++++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 457789999999999999999886 67999999999999998764 68899998875 7788999999999
Q ss_pred ccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEE
Q 018194 198 EATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVV 275 (359)
Q Consensus 198 ~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i 275 (359)
.+++|++ +...+++++.++|||||++++..+.... ...+...+.. .......+.+++.++|+++||+++
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS--------LYSLINFYID-PTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS--------HHHHHHHTTS-TTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch--------hHHHHHHhcC-ccccccCCHHHHHHHHHHCCCeEE
Confidence 9999998 5599999999999999999987544221 1111122211 222346688999999999999999
Q ss_pred EEEecCC
Q 018194 276 KEKDLAK 282 (359)
Q Consensus 276 ~~~~~~~ 282 (359)
+...+..
T Consensus 180 ~~~~~~~ 186 (240)
T 3dli_A 180 KIEFFEE 186 (240)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 9888753
No 36
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.87 E-value=2e-22 Score=176.71 Aligned_cols=110 Identities=21% Similarity=0.261 Sum_probs=94.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
+.+.+....+ .+.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|+++ ++++++++|+++++++++
T Consensus 29 l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 29 LFRWLGEVAP--ARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCC
Confidence 3445555543 3569999999999999999986 57999999999999887542 479999999999999999
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeee
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
+||+|++..++||+ ++..+++++.|+|||||+|++..+..
T Consensus 99 sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 99 SVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 99999999999876 68899999999999999999877554
No 37
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.87 E-value=9.9e-22 Score=166.84 Aligned_cols=151 Identities=18% Similarity=0.193 Sum_probs=116.8
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcC-----------CCCCeEEEEcCCCCC
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAG-----------LDSLCEVVCGNFLKM 184 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-----------~~~~i~~~~~d~~~~ 184 (359)
..+.+.++.+|||+|||+|..+..|++. +.+|+|+|+|+.|++.|+++..... ...+++++++|+.++
T Consensus 16 ~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HHHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred HhcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 4456678899999999999999999986 7899999999999999998764210 124799999999998
Q ss_pred CCCC-CccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHH
Q 018194 185 PFED-NHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYA 261 (359)
Q Consensus 185 ~~~~-~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (359)
++++ ++||+|++..+++|++ +...++++++++|||||++++........ ...+.+...+.+
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~----------------~~~~~~~~~~~~ 158 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA----------------LLEGPPFSVPQT 158 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS----------------SSSSCCCCCCHH
T ss_pred CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc----------------ccCCCCCCCCHH
Confidence 8765 7999999999999986 35679999999999999955543222110 011122345789
Q ss_pred HHHHHHHhCCCeEEEEEecCCCC
Q 018194 262 EITEIAKRVGFEVVKEKDLAKPP 284 (359)
Q Consensus 262 ~~~~~l~~aGF~~i~~~~~~~~~ 284 (359)
++.+++++ ||+++..+......
T Consensus 159 el~~~~~~-gf~i~~~~~~~~~~ 180 (203)
T 1pjz_A 159 WLHRVMSG-NWEVTKVGGQDTLH 180 (203)
T ss_dssp HHHHTSCS-SEEEEEEEESSCTT
T ss_pred HHHHHhcC-CcEEEEeccccchh
Confidence 99999998 99998887765433
No 38
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.87 E-value=1.7e-21 Score=171.77 Aligned_cols=157 Identities=14% Similarity=0.040 Sum_probs=126.2
Q ss_pred ccccchhhHHHHhhhhhHHHHHhhcCCceeecCC-----CCCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHH-
Q 018194 64 TTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPS-----IPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPM- 137 (359)
Q Consensus 64 ~~~~~~~~~v~~~yd~~~~~y~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~- 137 (359)
.+.+...+.+.++|+...++|+..|+.+++.+.. ........ .....+.-..++.+.++.+|||||||+|.++
T Consensus 60 ~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~-~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta 138 (298)
T 3fpf_A 60 AEMNHALSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPR-YLELLKNEAALGRFRRGERAVFIGGGPLPLTG 138 (298)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHH-HHHHHHHHHHHTTCCTTCEEEEECCCSSCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCccc-HHHHHHHHHHHcCCCCcCEEEEECCCccHHHH
Confidence 4566788899999999999999999988854432 01111122 2233333335678899999999999998766
Q ss_pred HHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccccCCHHHHHHHHHhcc
Q 018194 138 RAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVL 217 (359)
Q Consensus 138 ~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L 217 (359)
..+++.++++|+|+|+|+.|++.|+++++..++ ++++++++|+.+++ +++||+|++... .+++..+++++.++|
T Consensus 139 ~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~L 212 (298)
T 3fpf_A 139 ILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYV 212 (298)
T ss_dssp HHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHC
T ss_pred HHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHc
Confidence 455666789999999999999999999999888 79999999998865 689999998654 579999999999999
Q ss_pred CCCCEEEEEE
Q 018194 218 KPGSLYVSYE 227 (359)
Q Consensus 218 kpgG~l~~~~ 227 (359)
||||++++.+
T Consensus 213 kPGG~Lvv~~ 222 (298)
T 3fpf_A 213 DTETRIIYRT 222 (298)
T ss_dssp CTTCEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999999864
No 39
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=4e-21 Score=164.08 Aligned_cols=171 Identities=19% Similarity=0.195 Sum_probs=132.0
Q ss_pred hhHHHHhhhhhHHHHHhhcCCceeecCCCCCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEE
Q 018194 70 PDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVV 149 (359)
Q Consensus 70 ~~~v~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~ 149 (359)
.+...++|+.....|+..... ......++. .+.++.+|||+|||+|.++..+++. +.+|+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~~-----------------~~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~ 69 (211)
T 3e23_A 10 DDDTLRFYRGNATAYAERQPR-----------------SATLTKFLG--ELPAGAKILELGCGAGYQAEAMLAA-GFDVD 69 (211)
T ss_dssp CHHHHHHHHHSHHHHTTCCCC-----------------CHHHHHHHT--TSCTTCEEEESSCTTSHHHHHHHHT-TCEEE
T ss_pred cHHHHHHHHHHHHHHhhccch-----------------hHHHHHHHH--hcCCCCcEEEECCCCCHHHHHHHHc-CCeEE
Confidence 456677888888777754322 111222333 2456889999999999999999986 67999
Q ss_pred EEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEE
Q 018194 150 GITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 150 g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+|+|+.+++.++++. ++.+..+|+.+++ ++++||+|++..+++|++ ++..+++++.++|||||++++..
T Consensus 70 ~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 70 ATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp EEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999999999999886 3678899999888 678999999999999998 78899999999999999999875
Q ss_pred eeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCC-CeEEEEEecC
Q 018194 228 WVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVG-FEVVKEKDLA 281 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-F~~i~~~~~~ 281 (359)
.......... ......+++.+++.++|+++| |++++.....
T Consensus 142 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 142 KSGEGEGRDK-------------LARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp ECCSSCEECT-------------TSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred cCCCcccccc-------------cchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 4332211100 011124568999999999999 9999887653
No 40
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.86 E-value=4.6e-21 Score=166.15 Aligned_cols=159 Identities=25% Similarity=0.298 Sum_probs=123.8
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCCCCCCccceEEe
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGL----DSLCEVVCGNFLKMPFEDNHFDGAYS 196 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~fD~v~~ 196 (359)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++ ..++.+..+|+..+++++++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 47889999999999999999987 77999999999999999998877665 23689999999999888899999999
Q ss_pred cccccccCCHH---HHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCC-------------CCCCCCCH
Q 018194 197 IEATCHAPKLE---DVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGD-------------ALPGLRSY 260 (359)
Q Consensus 197 ~~~l~~~~~~~---~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 260 (359)
..+++|++++. .+++++.++|||||++++.++........................ .....++.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 99999999887 999999999999999999876553221111111111110000000 01135689
Q ss_pred HHHHHHHHhCCCeEEEEEec
Q 018194 261 AEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 261 ~~~~~~l~~aGF~~i~~~~~ 280 (359)
+++.++|+++||++++....
T Consensus 188 ~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 188 KELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp HHHHHHHHTTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEEec
Confidence 99999999999999987754
No 41
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.86 E-value=3.5e-21 Score=169.10 Aligned_cols=166 Identities=14% Similarity=0.157 Sum_probs=124.0
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
..+...+...++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++.. ..+++++++|+.++++++++|
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCe
Confidence 4566677777889999999999999999998643499999999999999998865 357999999999998888999
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCccccc--------CchHHHHHHhhhhcC----------CC
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEA--------ENKEHVDIIQGIERG----------DA 253 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~----------~~ 253 (359)
|+|++..+++|++++..+++++.++|||||++++........... ...........+... ..
T Consensus 110 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (253)
T 3g5l_A 110 NVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDV 189 (253)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEE
T ss_pred EEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccC
Confidence 999999999999999999999999999999999864322100000 000000000000000 00
Q ss_pred CCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 254 LPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 254 ~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
....++.+++.++|+++||++++..+..
T Consensus 190 ~~~~~t~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 190 QKYHRTVTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp EEECCCHHHHHHHHHHTTEEEEEEECCC
T ss_pred ccEecCHHHHHHHHHHcCCeeeeeecCC
Confidence 0012388999999999999999987753
No 42
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.85 E-value=8.5e-21 Score=164.82 Aligned_cols=147 Identities=20% Similarity=0.266 Sum_probs=121.6
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEE
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAY 195 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~ 195 (359)
.....++ .+|||||||+|.++..+++ .+.+|+|+|+|+.+++.++++....+...+++++++|+.+++ ++++||+|+
T Consensus 61 ~~~~~~~-~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~ 137 (235)
T 3lcc_A 61 DTSSLPL-GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIF 137 (235)
T ss_dssp HTTCSCC-EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEE
T ss_pred HhcCCCC-CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEE
Confidence 3334444 5999999999999999987 467999999999999999999876555567999999999876 456999999
Q ss_pred ecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCe
Q 018194 196 SIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFE 273 (359)
Q Consensus 196 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 273 (359)
+..+++|++ +...+++++.++|||||++++.++..... ..+.+...+.+++.++|+++||+
T Consensus 138 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~Gf~ 200 (235)
T 3lcc_A 138 DYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH-----------------VGGPPYKVDVSTFEEVLVPIGFK 200 (235)
T ss_dssp EESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC-----------------CSCSSCCCCHHHHHHHHGGGTEE
T ss_pred EChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc-----------------CCCCCccCCHHHHHHHHHHcCCe
Confidence 999999998 89999999999999999999876544311 11122346889999999999999
Q ss_pred EEEEEecCC
Q 018194 274 VVKEKDLAK 282 (359)
Q Consensus 274 ~i~~~~~~~ 282 (359)
+++.+....
T Consensus 201 ~~~~~~~~~ 209 (235)
T 3lcc_A 201 AVSVEENPH 209 (235)
T ss_dssp EEEEEECTT
T ss_pred EEEEEecCC
Confidence 999888753
No 43
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.85 E-value=1.7e-20 Score=168.58 Aligned_cols=161 Identities=19% Similarity=0.258 Sum_probs=121.1
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEecc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF-EDNHFDGAYSIE 198 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~v~~~~ 198 (359)
+.++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++....++..+++++++|+.+.++ ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 4678899999999999999988865459999999999999999999887776789999999999887 578999999999
Q ss_pred cccc----cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccc--------c-----------CchHHH-HHHh-hhhcC--
Q 018194 199 ATCH----APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYE--------A-----------ENKEHV-DIIQ-GIERG-- 251 (359)
Q Consensus 199 ~l~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--------~-----------~~~~~~-~~~~-~~~~~-- 251 (359)
+++| .+++..+++++.++|||||++++..+....... . ..+... .... .....
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 9977 457889999999999999999987643211000 0 000000 0000 00000
Q ss_pred CCCCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 252 DALPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
.....+.+.+++.++|+++||++++...+
T Consensus 222 ~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 222 NCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp SEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred CCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 00013568899999999999999998776
No 44
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.85 E-value=1.4e-20 Score=161.50 Aligned_cols=161 Identities=15% Similarity=0.207 Sum_probs=118.3
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEcCCCCCC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDS----LCEVVCGNFLKMP 185 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~ 185 (359)
.+.+.+.+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.+++++...+++. +++++++|+...+
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 344555555567889999999999999999985 33799999999999999999987776654 7999999998777
Q ss_pred CCCCccceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHH
Q 018194 186 FEDNHFDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEI 263 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (359)
.+.++||+|++..+++|+++. ..+++++.++|||||.+++...... .. ..................++.+++
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~l 171 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEY---NV---KFANLPAGKLRHKDHRFEWTRSQF 171 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHH---HH---HTC-----------CCSCBCHHHH
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCccc---ch---hhcccccccccccccccccCHHHH
Confidence 777899999999999999855 8999999999999997776432110 00 000000000001111234578888
Q ss_pred H----HHHHhCCCeEEEE
Q 018194 264 T----EIAKRVGFEVVKE 277 (359)
Q Consensus 264 ~----~~l~~aGF~~i~~ 277 (359)
. ++++++||+++..
T Consensus 172 ~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 172 QNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHHHcCceEEEE
Confidence 8 8999999988653
No 45
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.85 E-value=2.3e-20 Score=162.82 Aligned_cols=102 Identities=19% Similarity=0.295 Sum_probs=92.5
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc-cc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE-AT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~-~l 200 (359)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. +++++++|+.+++++ ++||+|++.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCccc
Confidence 6789999999999999999986 67999999999999999999887654 689999999988876 8899999998 99
Q ss_pred ccc---CCHHHHHHHHHhccCCCCEEEEEE
Q 018194 201 CHA---PKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 201 ~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+ +++..+++++.++|||||++++..
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999 568899999999999999999843
No 46
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.84 E-value=1.2e-19 Score=167.50 Aligned_cols=167 Identities=14% Similarity=0.206 Sum_probs=131.6
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..+++.++..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.++++....+++++++++.+|+.+.++++.
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 257 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA- 257 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC-
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC-
Confidence 45666777788899999999999999999985 5789999999 99999999999988887789999999998776543
Q ss_pred cceEEecccccccCC--HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 191 FDGAYSIEATCHAPK--LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 191 fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
|+|++..+++++++ ...+|++++++|||||++++.++................+.....+.....+++.+++.++|+
T Consensus 258 -D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~ 336 (359)
T 1x19_A 258 -DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILE 336 (359)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHH
T ss_pred -CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHH
Confidence 99999999999987 789999999999999999999877654311111111111111111222334578999999999
Q ss_pred hCCCeEEEEEecC
Q 018194 269 RVGFEVVKEKDLA 281 (359)
Q Consensus 269 ~aGF~~i~~~~~~ 281 (359)
++||++++...+.
T Consensus 337 ~aGf~~v~~~~~~ 349 (359)
T 1x19_A 337 SLGYKDVTMVRKY 349 (359)
T ss_dssp HHTCEEEEEEEET
T ss_pred HCCCceEEEEecC
Confidence 9999999987763
No 47
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.84 E-value=7.6e-20 Score=167.11 Aligned_cols=158 Identities=21% Similarity=0.218 Sum_probs=125.2
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccc
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFD 192 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 192 (359)
++..++..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.++++....++.+++++..+|+. .+++. +||
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D 237 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAG 237 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCS
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCc
Confidence 344445566789999999999999999874 6789999999 9999999999998888889999999997 35554 899
Q ss_pred eEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 193 GAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 193 ~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
+|++.+++||+++. ..+|++++++|||||++++.+...... .+ .. ...+...... ....++.+++.++|+++
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~-~~-~~d~~~~~~~---~~~~~t~~e~~~ll~~a 311 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HA-GT-GMDLRMLTYF---GGKERSLAELGELAAQA 311 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----C-CH-HHHHHHHHHH---SCCCCCHHHHHHHHHHT
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-Cc-cH-HHHHHHHhhC---CCCCCCHHHHHHHHHHC
Confidence 99999999999874 899999999999999999998766543 11 11 1111111111 12356899999999999
Q ss_pred CCeEEEEEec
Q 018194 271 GFEVVKEKDL 280 (359)
Q Consensus 271 GF~~i~~~~~ 280 (359)
||++++....
T Consensus 312 Gf~~~~~~~~ 321 (332)
T 3i53_A 312 GLAVRAAHPI 321 (332)
T ss_dssp TEEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 9999998765
No 48
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.84 E-value=7.1e-21 Score=171.41 Aligned_cols=169 Identities=16% Similarity=0.189 Sum_probs=122.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCeEEEEcCCCCCCCCC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLD--SLCEVVCGNFLKMPFED 188 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~i~~~~~d~~~~~~~~ 188 (359)
...++..+...++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....++. .+++++++|+.++++ +
T Consensus 72 ~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~ 148 (299)
T 3g2m_A 72 AREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-D 148 (299)
T ss_dssp HHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-S
T ss_pred HHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-C
Confidence 3445555555444 9999999999999999986 689999999999999999998765432 579999999999887 6
Q ss_pred CccceEEec-ccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCch---HHH-------HHHhhh-------
Q 018194 189 NHFDGAYSI-EATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENK---EHV-------DIIQGI------- 248 (359)
Q Consensus 189 ~~fD~v~~~-~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~~~-------~~~~~~------- 248 (359)
++||+|++. .+++|++ +...+|+++.++|||||++++..+........... ... .+...+
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQ 228 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEE
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEE
Confidence 899999865 5666665 46899999999999999999976554321000000 000 000000
Q ss_pred ----hc-C---C------CCCCCCCHHHHHHHHHhCCCeEEEEEecCC
Q 018194 249 ----ER-G---D------ALPGLRSYAEITEIAKRVGFEVVKEKDLAK 282 (359)
Q Consensus 249 ----~~-~---~------~~~~~~~~~~~~~~l~~aGF~~i~~~~~~~ 282 (359)
.. + . ....+++.+++.++|+++||++++...+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 229 EITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp EEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred EEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 00 0 0 001245899999999999999999988853
No 49
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.84 E-value=3.9e-20 Score=158.79 Aligned_cols=163 Identities=16% Similarity=0.178 Sum_probs=119.6
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEcCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDS----LCEVVCGNFLKM 184 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~----~i~~~~~d~~~~ 184 (359)
..+.+.+.+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.++++....+++. +++++++|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 17 RLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 3344555555567889999999999999999985 33799999999999999999987766654 799999999887
Q ss_pred CCCCCccceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHH
Q 018194 185 PFEDNHFDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAE 262 (359)
Q Consensus 185 ~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (359)
++++++||+|++..+++|+++. ..+++++.++|||||.++....... .......... ..........++.++
T Consensus 97 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~ 170 (219)
T 3jwg_A 97 DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEY---NFHYGNLFEG---NLRHRDHRFEWTRKE 170 (219)
T ss_dssp CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGG---GGCCCCT--------GGGCCTTSBCHHH
T ss_pred ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhh---hhhhcccCcc---cccccCceeeecHHH
Confidence 7777899999999999999855 7999999999999996665432111 1000000000 000011123457888
Q ss_pred HH----HHHHhCCCeEEEEE
Q 018194 263 IT----EIAKRVGFEVVKEK 278 (359)
Q Consensus 263 ~~----~~l~~aGF~~i~~~ 278 (359)
+. ++++++||++....
T Consensus 171 l~~~~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 171 FQTWAVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp HHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHHHHCCcEEEEEe
Confidence 88 88999999876654
No 50
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.84 E-value=2.2e-19 Score=166.27 Aligned_cols=163 Identities=18% Similarity=0.207 Sum_probs=130.5
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
...++..++..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.++++....++.++++++.+|+. .+++.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~- 267 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD- 267 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-
Confidence 355666777778899999999999999999884 6789999999 9999999999998888889999999998 45555
Q ss_pred ccceEEecccccccCCHH--HHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 018194 190 HFDGAYSIEATCHAPKLE--DVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIA 267 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (359)
.||+|++..+++++++.. .+|+++++.|||||++++.+.......... .....+......+ ...++.+++.++|
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~~~~~~~~---g~~~t~~e~~~ll 343 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDLLLLVLVG---GAERSESEFAALL 343 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHHHHHHHHS---CCCBCHHHHHHHH
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhHHHHhhcC---CccCCHHHHHHHH
Confidence 899999999999998765 899999999999999999987665432211 1111111111111 2356889999999
Q ss_pred HhCCCeEEEEEec
Q 018194 268 KRVGFEVVKEKDL 280 (359)
Q Consensus 268 ~~aGF~~i~~~~~ 280 (359)
+++||++++...+
T Consensus 344 ~~aGf~~~~~~~~ 356 (369)
T 3gwz_A 344 EKSGLRVERSLPC 356 (369)
T ss_dssp HTTTEEEEEEEEC
T ss_pred HHCCCeEEEEEEC
Confidence 9999999998764
No 51
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.84 E-value=2.3e-20 Score=167.53 Aligned_cols=155 Identities=12% Similarity=0.036 Sum_probs=109.2
Q ss_pred CCCCCEEEEECCCCChHHHHHH----h-hcCCEE--EEEeCCHHHHHHHHHHHHHcCCCCCeEE--EEcCCCCCC-----
Q 018194 120 VKAGDRILDVGCGVGGPMRAIA----A-HSRANV--VGITINEYQVNRARLHNKKAGLDSLCEV--VCGNFLKMP----- 185 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~----~-~~~~~v--~g~D~s~~~~~~a~~~~~~~~~~~~i~~--~~~d~~~~~----- 185 (359)
..++.+|||||||+|.++..++ . .++..| +|+|+|+.|++.|+++....+...++.+ ..+++.+++
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3567899999999998665433 2 245644 9999999999999998865421234554 455554432
Q ss_pred -CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHH
Q 018194 186 -FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEIT 264 (359)
Q Consensus 186 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (359)
+++++||+|++..+++|++|+..+|++++++|||||++++........+ ..........+. ......+.+..++.
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~ 205 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGW---DKLWKKYGSRFP-QDDLCQYITSDDLT 205 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHH---HHHHHHHGGGSC-CCTTCCCCCHHHHH
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccH---HHHHHHHHHhcc-CCCcccCCCHHHHH
Confidence 4578999999999999999999999999999999999999754321110 011111111111 11123567899999
Q ss_pred HHHHhCCCeEEEEE
Q 018194 265 EIAKRVGFEVVKEK 278 (359)
Q Consensus 265 ~~l~~aGF~~i~~~ 278 (359)
++|+++||+++...
T Consensus 206 ~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 206 QMLDNLGLKYECYD 219 (292)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHHCCCceEEEE
Confidence 99999999987643
No 52
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.84 E-value=4.6e-20 Score=158.41 Aligned_cols=139 Identities=20% Similarity=0.252 Sum_probs=112.1
Q ss_pred CCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccc
Q 018194 123 GDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCH 202 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 202 (359)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ +++++.+|+.++++++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999988764 9999999999998875 478999999998888889999999999999
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcC---CCCCCCCCHHHHHHHHHhCCCeEEEEEe
Q 018194 203 APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERG---DALPGLRSYAEITEIAKRVGFEVVKEKD 279 (359)
Q Consensus 203 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~aGF~~i~~~~ 279 (359)
++++..+++++.++|+|||.+++.++..... ..........+ .....+++.+++.++|+++||++++...
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDRESF-------LGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECSSSH-------HHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCCccH-------HHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 9999999999999999999999976543211 11111111111 1123467899999999999999998776
Q ss_pred cC
Q 018194 280 LA 281 (359)
Q Consensus 280 ~~ 281 (359)
..
T Consensus 188 ~~ 189 (219)
T 1vlm_A 188 TL 189 (219)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 53
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.84 E-value=5.3e-20 Score=160.37 Aligned_cols=164 Identities=21% Similarity=0.251 Sum_probs=122.4
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..+...++..++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++... .++++.++|+.++++++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~ 107 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDS 107 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTC
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCC
Confidence 34666777778899999999999999999986 55 999999999999999887542 3689999999998888889
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCc------h-----HHHHHH------hhhhcCCC
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAEN------K-----EHVDII------QGIERGDA 253 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~------~-----~~~~~~------~~~~~~~~ 253 (359)
||+|++..+++|++++..+++++.++|||||++++............. . ...... ..+.....
T Consensus 108 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (243)
T 3bkw_A 108 FDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGV 187 (243)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSC
T ss_pred ceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCce
Confidence 999999999999999999999999999999999987643210000000 0 000000 00000000
Q ss_pred CCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 254 LPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 254 ~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
....++.+++.++|+++||++++....
T Consensus 188 ~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 188 VKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred EEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 112258899999999999999988765
No 54
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.84 E-value=3.3e-19 Score=153.78 Aligned_cols=157 Identities=18% Similarity=0.220 Sum_probs=120.3
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CCCCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK--MPFEDN 189 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~~~~~~ 189 (359)
..+.+.+. .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .++..+|+.+ .+++++
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTT
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCC
Confidence 34555555 67889999999999999999987 689999999999999987653 3789999987 567778
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhh-hhc------CCCCCCCCCHHH
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQG-IER------GDALPGLRSYAE 262 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~ 262 (359)
+||+|++..+++|++++..+++++.++|+|||.+++....... .......... +.. ......+++.++
T Consensus 93 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSH-----ISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNE 167 (230)
T ss_dssp CEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTS-----HHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHH
T ss_pred ccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcch-----HHHHHHHhcCCceeccCCCCCcceEEEecHHH
Confidence 9999999999999999999999999999999999987543221 0111111110 000 001124578999
Q ss_pred HHHHHHhCCCeEEEEEecCCC
Q 018194 263 ITEIAKRVGFEVVKEKDLAKP 283 (359)
Q Consensus 263 ~~~~l~~aGF~~i~~~~~~~~ 283 (359)
+.++|+++||++++...+...
T Consensus 168 ~~~~l~~~Gf~~~~~~~~~~~ 188 (230)
T 3cc8_A 168 MLRMFLKAGYSISKVDRVYVD 188 (230)
T ss_dssp HHHHHHHTTEEEEEEEEEECC
T ss_pred HHHHHHHcCCeEEEEEecccC
Confidence 999999999999998887543
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.84 E-value=1.1e-20 Score=162.84 Aligned_cols=160 Identities=18% Similarity=0.218 Sum_probs=116.4
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM---PFED 188 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~ 188 (359)
..++..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.+..+|+.++ ++..
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccccc
Confidence 34555555556789999999999999999987 78999999999999999876 3578888888776 4333
Q ss_pred -CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCc-hHH-HHHHhhhhcC--CCCCCCCCHHHH
Q 018194 189 -NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAEN-KEH-VDIIQGIERG--DALPGLRSYAEI 263 (359)
Q Consensus 189 -~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~--~~~~~~~~~~~~ 263 (359)
.+||+|++..+++ .+++..+++++.++|||||++++.++.......... ..+ ...+..+... .....+++.+++
T Consensus 114 ~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (227)
T 3e8s_A 114 GKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASW 192 (227)
T ss_dssp CCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHH
T ss_pred CCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHH
Confidence 4599999999999 789999999999999999999997754432111100 000 0000000000 011124589999
Q ss_pred HHHHHhCCCeEEEEEec
Q 018194 264 TEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~ 280 (359)
.++|+++||++++....
T Consensus 193 ~~~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 193 LNALDMAGLRLVSLQEP 209 (227)
T ss_dssp HHHHHHTTEEEEEEECC
T ss_pred HHHHHHcCCeEEEEecC
Confidence 99999999999988763
No 56
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.83 E-value=2.1e-20 Score=153.92 Aligned_cols=141 Identities=17% Similarity=0.129 Sum_probs=117.0
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccce
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDG 193 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 193 (359)
+++.+.+.++.+|||+|||+|.++..+++... +|+|+|+|+.+++.++++ .+++++..+| .++++++||+
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~ 78 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDF 78 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEE
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEE
Confidence 34445667888999999999999999998654 999999999999999887 2479999999 5677889999
Q ss_pred EEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCe
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFE 273 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 273 (359)
|++..+++|++++..+++++.++|||||++++.++......... .....++.+++.++|+ ||+
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~--Gf~ 141 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGP---------------PLSIRMDEKDYMGWFS--NFV 141 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS---------------CGGGCCCHHHHHHHTT--TEE
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCc---------------hHhhhcCHHHHHHHHh--CcE
Confidence 99999999999999999999999999999999887654321111 1113468899999998 999
Q ss_pred EEEEEecC
Q 018194 274 VVKEKDLA 281 (359)
Q Consensus 274 ~i~~~~~~ 281 (359)
+++...+.
T Consensus 142 ~~~~~~~~ 149 (170)
T 3i9f_A 142 VEKRFNPT 149 (170)
T ss_dssp EEEEECSS
T ss_pred EEEccCCC
Confidence 99987764
No 57
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.83 E-value=7.5e-20 Score=156.06 Aligned_cols=143 Identities=18% Similarity=0.174 Sum_probs=109.1
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
++.+|||+|||+|.++..+ +. +|+|+|+|+.+++.++++. .+++++++|+.++++++++||+|++..++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 7889999999999998877 45 9999999999999998875 46899999999998888899999999999
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
+|++++..+++++.++|||||.+++.++.....+. .........-........+++.+++.++|+ | .+.....+
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G-~~~~~~~~ 179 (211)
T 2gs9_A 106 EFVEDVERVLLEARRVLRPGGALVVGVLEALSPWA---ALYRRLGEKGVLPWAQARFLAREDLKALLG--P-PEAEGEAV 179 (211)
T ss_dssp TTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSHHH---HHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S-CSEEEEEC
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCcHH---HHHHHHhhccCccccccccCCHHHHHHHhc--C-cceeEEEE
Confidence 99999999999999999999999997654432111 000100000000011235679999999998 8 43333333
No 58
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.83 E-value=1.3e-19 Score=152.90 Aligned_cols=149 Identities=19% Similarity=0.232 Sum_probs=122.3
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccc
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFD 192 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 192 (359)
.+.+.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+++ ++++..+|+.++++ +++||
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC-CCCEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC-CCCce
Confidence 3555666667889999999999999999987 679999999999999999998887764 69999999999887 78999
Q ss_pred eEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 193 GAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 193 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
+|++..+++|++ +...+++++.++|||||++++.++.....+.. .......++.+++.++|++
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~- 164 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC--------------TVGFPFAFKEGELRRYYEG- 164 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC--------------CSCCSCCBCTTHHHHHTTT-
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC--------------CCCCCCccCHHHHHHHhcC-
Confidence 999999999997 78999999999999999998876554432211 1112234577899999986
Q ss_pred CCeEEEEEec
Q 018194 271 GFEVVKEKDL 280 (359)
Q Consensus 271 GF~~i~~~~~ 280 (359)
|++++....
T Consensus 165 -f~~~~~~~~ 173 (199)
T 2xvm_A 165 -WERVKYNED 173 (199)
T ss_dssp -SEEEEEECC
T ss_pred -CeEEEeccc
Confidence 999887643
No 59
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.83 E-value=1.6e-19 Score=165.19 Aligned_cols=166 Identities=13% Similarity=0.218 Sum_probs=129.0
Q ss_pred HHHHHhcCC--CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 112 EMAVDLIDV--KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 112 ~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
..+++.++. .++.+|||+|||+|.++..+++. ++.+++++|+| .+++.++++....++.++++++.+|+.+.+++.
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 231 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGN 231 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCS
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCC
Confidence 345555666 77889999999999999999985 57899999999 999999999988888778999999998876654
Q ss_pred CccceEEecccccccCC--HHHHHHHHHhccCCCCEEEEEEeeeCcccccC-chHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPK--LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAE-NKEHVDIIQGIERGDALPGLRSYAEITE 265 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (359)
+ ||+|++..+++|+++ ...++++++++|+|||++++.++......... ......+....... ....++.+++.+
T Consensus 232 ~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t~~~~~~ 308 (335)
T 2r3s_A 232 D-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTP--NGDAYTFAEYES 308 (335)
T ss_dssp C-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSS--SCCCCCHHHHHH
T ss_pred C-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCC--CCCcCCHHHHHH
Confidence 4 999999999999964 57999999999999999999887654321111 11111111111111 124568999999
Q ss_pred HHHhCCCeEEEEEecC
Q 018194 266 IAKRVGFEVVKEKDLA 281 (359)
Q Consensus 266 ~l~~aGF~~i~~~~~~ 281 (359)
+|+++||++++...+.
T Consensus 309 ll~~aGf~~~~~~~~~ 324 (335)
T 2r3s_A 309 MFSNAGFSHSQLHSLP 324 (335)
T ss_dssp HHHHTTCSEEEEECCT
T ss_pred HHHHCCCCeeeEEECC
Confidence 9999999999987653
No 60
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.83 E-value=2e-20 Score=165.24 Aligned_cols=117 Identities=17% Similarity=0.256 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 018194 104 RDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK 183 (359)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 183 (359)
........+.+...+ .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. +++++++|+.+
T Consensus 34 ~~~~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~ 104 (263)
T 3pfg_A 34 HREAADLAALVRRHS--PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRD 104 (263)
T ss_dssp HHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTT
T ss_pred HHHHHHHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHH
Confidence 334444455555544 35689999999999999999986 5799999999999999998742 68999999999
Q ss_pred CCCCCCccceEEecc-cccccC---CHHHHHHHHHhccCCCCEEEEEEeee
Q 018194 184 MPFEDNHFDGAYSIE-ATCHAP---KLEDVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 184 ~~~~~~~fD~v~~~~-~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
+++ +++||+|++.. +++|++ +...+++++.++|||||++++.++..
T Consensus 105 ~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 105 FSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp CCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 887 68999999998 999996 56788999999999999999965433
No 61
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.83 E-value=1.5e-19 Score=158.12 Aligned_cols=145 Identities=15% Similarity=0.186 Sum_probs=113.7
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHH----------c------CCCCCeEEEEcCCC
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKK----------A------GLDSLCEVVCGNFL 182 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~----------~------~~~~~i~~~~~d~~ 182 (359)
...++.+|||+|||+|..+..|++. |.+|+|+|+|+.|++.|+++... . ....+++++++|+.
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 3457889999999999999999986 78999999999999999876531 0 01257999999999
Q ss_pred CCCCCC-CccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCC
Q 018194 183 KMPFED-NHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRS 259 (359)
Q Consensus 183 ~~~~~~-~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (359)
++++++ ++||+|++..++++++ +...+++++.++|||||++++..+..... ...+.+...+
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~----------------~~~g~~~~~~ 207 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPT----------------KHAGPPFYVP 207 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTT----------------SCCCSSCCCC
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCc----------------cCCCCCCCCC
Confidence 988654 8999999999999986 46789999999999999997654432210 0012223368
Q ss_pred HHHHHHHHHhCCCeEEEEEecC
Q 018194 260 YAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 260 ~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
.+++.++++. +|+++..+.+.
T Consensus 208 ~~el~~~l~~-~f~v~~~~~~~ 228 (252)
T 2gb4_A 208 SAELKRLFGT-KCSMQCLEEVD 228 (252)
T ss_dssp HHHHHHHHTT-TEEEEEEEEEE
T ss_pred HHHHHHHhhC-CeEEEEEeccc
Confidence 8999999987 59998877653
No 62
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.83 E-value=4.1e-20 Score=163.01 Aligned_cols=161 Identities=16% Similarity=0.211 Sum_probs=114.5
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
..+.+...+. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. . .+.++|+.+++++++
T Consensus 44 ~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~~~ 113 (260)
T 2avn_A 44 IGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFPSG 113 (260)
T ss_dssp HHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSCTT
T ss_pred HHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCCCC
Confidence 3444445444 6789999999999999999986 6799999999999999988753 1 288999999988889
Q ss_pred ccceEEeccccccc-CCHHHHHHHHHhccCCCCEEEEEEeeeCcccc----cCc-hHHHHHHh-hhhc-CCC----CCCC
Q 018194 190 HFDGAYSIEATCHA-PKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYE----AEN-KEHVDIIQ-GIER-GDA----LPGL 257 (359)
Q Consensus 190 ~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~----~~~-~~~~~~~~-~~~~-~~~----~~~~ 257 (359)
+||+|++..++.|+ +++..+++++.++|||||++++.......... ... ........ .... +.. ...+
T Consensus 114 ~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (260)
T 2avn_A 114 AFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYA 193 (260)
T ss_dssp CEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEEC
T ss_pred CEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEec
Confidence 99999998877766 78999999999999999999987644321000 000 00000010 0000 000 0025
Q ss_pred CCHHHHHHHHHhCCCeEEEEEecCCC
Q 018194 258 RSYAEITEIAKRVGFEVVKEKDLAKP 283 (359)
Q Consensus 258 ~~~~~~~~~l~~aGF~~i~~~~~~~~ 283 (359)
++++++.++ +||++++...+...
T Consensus 194 ~~~~~l~~l---aGf~~~~~~~~~~~ 216 (260)
T 2avn_A 194 FKPEDLDSL---EGFETVDIRGIGVM 216 (260)
T ss_dssp BCGGGGSSC---TTEEEEEEEEECSS
T ss_pred cCHHHHHHh---cCceEEEEECCCCc
Confidence 677788777 99999998877543
No 63
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.82 E-value=2.6e-20 Score=166.89 Aligned_cols=149 Identities=15% Similarity=0.112 Sum_probs=110.0
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc-----------------CCC------------
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA-----------------GLD------------ 171 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~-----------------~~~------------ 171 (359)
.++.+|||||||+|.....++...+.+|+|+|+|+.|++.|++++... +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999655455545679999999999999998865421 100
Q ss_pred CCeEEEEcCCCC-CCC-----CCCccceEEecccccc----cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHH
Q 018194 172 SLCEVVCGNFLK-MPF-----EDNHFDGAYSIEATCH----APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH 241 (359)
Q Consensus 172 ~~i~~~~~d~~~-~~~-----~~~~fD~v~~~~~l~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 241 (359)
..++++.+|+.+ +|+ ++++||+|+++.+++| ++++..+|++++++|||||+|++.+......+...
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~---- 225 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAG---- 225 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEET----
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcC----
Confidence 014677789987 553 3467999999999999 66789999999999999999999754322111100
Q ss_pred HHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 242 VDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
........++.+++.++|+++||+++....+.
T Consensus 226 --------~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 226 --------EARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp --------TEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred --------CeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 00001235689999999999999999987764
No 64
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.82 E-value=3.1e-19 Score=165.79 Aligned_cols=164 Identities=24% Similarity=0.281 Sum_probs=125.3
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..+++.++..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.++++....++.++++++.+|+.+ +++. .
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~ 248 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-T 248 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-C
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-C
Confidence 34556667778899999999999999999985 5689999999 99999999999988887789999999976 4443 4
Q ss_pred cceEEecccccccCCHH--HHHHHHHhccCCCCEEEEEEe--eeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 018194 191 FDGAYSIEATCHAPKLE--DVYAEVFRVLKPGSLYVSYEW--VTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEI 266 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
||+|++..+++|+++.. .++++++++|||||++++.++ ......................+ ...++.+++.++
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 325 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG---GRVRTRDEVVDL 325 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS---CCCCCHHHHHHH
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCC---CcCCCHHHHHHH
Confidence 99999999999998764 899999999999999999887 43221110000111111111111 245689999999
Q ss_pred HHhCCCeEEEEEecC
Q 018194 267 AKRVGFEVVKEKDLA 281 (359)
Q Consensus 267 l~~aGF~~i~~~~~~ 281 (359)
|+++||++++...+.
T Consensus 326 l~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 326 AGSAGLALASERTSG 340 (374)
T ss_dssp HHTTTEEEEEEEEEC
T ss_pred HHHCCCceEEEEECC
Confidence 999999999988763
No 65
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.82 E-value=1.4e-19 Score=167.18 Aligned_cols=157 Identities=14% Similarity=0.106 Sum_probs=120.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEec
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--PFEDNHFDGAYSI 197 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~v~~~ 197 (359)
.++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|+++....++.++++++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 45679999999999999999884 6789999999 999999999998887777899999999885 465 789999999
Q ss_pred ccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhh--hhcCCCCCCCCCHHHHHHHHHhCCCe
Q 018194 198 EATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQG--IERGDALPGLRSYAEITEIAKRVGFE 273 (359)
Q Consensus 198 ~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aGF~ 273 (359)
.++|++++. ..+|++++++|||||++++.+.................... ..........++.+++.++|+++||+
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 999999764 58899999999999999998866543211110000000000 01112223456899999999999999
Q ss_pred EEEEEe
Q 018194 274 VVKEKD 279 (359)
Q Consensus 274 ~i~~~~ 279 (359)
++++..
T Consensus 336 ~v~~~~ 341 (363)
T 3dp7_A 336 VEEIQD 341 (363)
T ss_dssp ESCCCC
T ss_pred EEEEEe
Confidence 987654
No 66
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.82 E-value=1.5e-20 Score=166.06 Aligned_cols=150 Identities=15% Similarity=0.094 Sum_probs=110.2
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCC----------------------------
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGL---------------------------- 170 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~---------------------------- 170 (359)
+..++.+|||||||+|.++..++.....+|+|+|+|+.|++.|++++.....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567889999999999887766654223799999999999999987654210
Q ss_pred CCCeE-EEEcCCCCC-CC---CCCccceEEeccccccc----CCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHH
Q 018194 171 DSLCE-VVCGNFLKM-PF---EDNHFDGAYSIEATCHA----PKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH 241 (359)
Q Consensus 171 ~~~i~-~~~~d~~~~-~~---~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 241 (359)
..++. ++++|+.+. |+ ..++||+|++..+++|+ ++...++++++++|||||+|++.++.....+....
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~--- 208 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGK--- 208 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT---
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCC---
Confidence 01233 889999873 33 25789999999999986 35678999999999999999997643322111000
Q ss_pred HHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 242 VDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
. ......++.+++.++|+++||++++....
T Consensus 209 -----~----~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 209 -----R----EFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp -----E----EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred -----e----EeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 0 00112458899999999999999988776
No 67
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.81 E-value=2.3e-19 Score=154.63 Aligned_cols=169 Identities=24% Similarity=0.339 Sum_probs=121.8
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 018194 107 TRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 186 (359)
.+...+.+.+.+. ++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+ .+++++++|+.++++
T Consensus 25 ~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~ 99 (227)
T 1ve3_A 25 IETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSF 99 (227)
T ss_dssp HHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCS
T ss_pred HHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCC
Confidence 3344455555543 4789999999999999999886 4599999999999999999987765 579999999999888
Q ss_pred CCCccceEEeccc--ccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchH---HHHH-Hhhhhc-CCC------
Q 018194 187 EDNHFDGAYSIEA--TCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKE---HVDI-IQGIER-GDA------ 253 (359)
Q Consensus 187 ~~~~fD~v~~~~~--l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~---~~~~-~~~~~~-~~~------ 253 (359)
++++||+|++..+ +++.+++..+++++.++|||||++++.+............. .... ...... ...
T Consensus 100 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (227)
T 1ve3_A 100 EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIE 179 (227)
T ss_dssp CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEE
T ss_pred CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEE
Confidence 7889999999999 55666889999999999999999999765432211110000 0000 000000 000
Q ss_pred -------C---CCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 254 -------L---PGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 254 -------~---~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
. ...+. .++.++|+++||+.++...+.
T Consensus 180 ~~~~~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~ 216 (227)
T 1ve3_A 180 FKSEQDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVG 216 (227)
T ss_dssp C-----CCEEEEECCC-HHHHHHHHTTTEEEEEEEEET
T ss_pred eccchhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhC
Confidence 0 01222 478999999999999998874
No 68
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.81 E-value=4.7e-19 Score=161.99 Aligned_cols=162 Identities=18% Similarity=0.131 Sum_probs=125.7
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..++..++..+ .+|||+|||+|..+..+++. ++.+++++|+ +.+++.++++....++.++++++.+|+.+ +++ ++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~ 233 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SN 233 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SS
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CC
Confidence 44556666666 89999999999999999885 6789999999 99999999998877766789999999987 555 67
Q ss_pred cceEEecccccccCCHH--HHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 191 FDGAYSIEATCHAPKLE--DVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
||+|++..++||+++.. .++++++++|||||++++.+................+......+ ...++.+++.++|+
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~~e~~~ll~ 310 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACA---GRHRTTEEVVDLLG 310 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHS---CCCCBHHHHHHHHH
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCC---CcCCCHHHHHHHHH
Confidence 99999999999998665 99999999999999999998765432111111111111111111 13458999999999
Q ss_pred hCCCeEEEEEec
Q 018194 269 RVGFEVVKEKDL 280 (359)
Q Consensus 269 ~aGF~~i~~~~~ 280 (359)
++||++++....
T Consensus 311 ~aGf~~~~~~~~ 322 (334)
T 2ip2_A 311 RGGFAVERIVDL 322 (334)
T ss_dssp HTTEEEEEEEEE
T ss_pred HCCCceeEEEEC
Confidence 999999988765
No 69
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.81 E-value=5.8e-20 Score=156.46 Aligned_cols=159 Identities=22% Similarity=0.306 Sum_probs=118.1
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 199 (359)
..++.+|||+|||+|..+..++...+.+|+|+|+|+.+++.++++....+ .++++.++|+.++++++++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcCh
Confidence 45678999999999998554444467899999999999999999987765 4689999999998888899999999999
Q ss_pred cccc--CCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCch-HHHHHHhhhhcCCC-CCCCCCHHHHHHHHHhCCCeEE
Q 018194 200 TCHA--PKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENK-EHVDIIQGIERGDA-LPGLRSYAEITEIAKRVGFEVV 275 (359)
Q Consensus 200 l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~aGF~~i 275 (359)
++|+ +++..+++++.++|||||++++.++...+....... .............. ...+++.+++.++++++||...
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~ 178 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFK 178 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceee
Confidence 9999 578999999999999999999987665332110000 00000000000111 1135688999999999999887
Q ss_pred EEEec
Q 018194 276 KEKDL 280 (359)
Q Consensus 276 ~~~~~ 280 (359)
+...+
T Consensus 179 ~~~~~ 183 (209)
T 2p8j_A 179 EDRVV 183 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 65443
No 70
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.81 E-value=9.7e-19 Score=161.58 Aligned_cols=164 Identities=23% Similarity=0.267 Sum_probs=127.1
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..+++.++..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.++++....++.++++++.+|+.+ +++. .
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~ 249 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-K 249 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-C
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-C
Confidence 34556667778899999999999999999885 5689999999 99999999999888887789999999976 4443 4
Q ss_pred cceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEee-eCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 018194 191 FDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWV-TTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIA 267 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (359)
||+|++..+++|+++. ..++++++++|||||++++.++. .....................+ ...++.+++.++|
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~~e~~~ll 326 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLG---GALRTREKWDGLA 326 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHS---CCCCBHHHHHHHH
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcC---CcCCCHHHHHHHH
Confidence 9999999999999876 58999999999999999998876 3322111101111111111111 2456899999999
Q ss_pred HhCCCeEEEEEecC
Q 018194 268 KRVGFEVVKEKDLA 281 (359)
Q Consensus 268 ~~aGF~~i~~~~~~ 281 (359)
+++||++++...+.
T Consensus 327 ~~aGf~~~~~~~~~ 340 (360)
T 1tw3_A 327 ASAGLVVEEVRQLP 340 (360)
T ss_dssp HHTTEEEEEEEEEE
T ss_pred HHCCCeEEEEEeCC
Confidence 99999999987763
No 71
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.81 E-value=7.7e-19 Score=161.74 Aligned_cols=162 Identities=15% Similarity=0.134 Sum_probs=126.1
Q ss_pred HHHHhcCCCC-CCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCC
Q 018194 113 MAVDLIDVKA-GDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FEDN 189 (359)
Q Consensus 113 ~~~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~ 189 (359)
.++..++..+ +.+|||||||+|.++..+++. ++.+++++|+ +.+++.++++....++.++++++.+|+.+.+ +..+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 4555666666 889999999999999999884 6789999999 8899999999988888778999999998865 1346
Q ss_pred ccceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccC-chHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 018194 190 HFDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAE-NKEHVDIIQGIERGDALPGLRSYAEITEI 266 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
.||+|++..++||+++. ..++++++++|||||++++.+.......... ......+........ ...++.+++.++
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~e~~~l 325 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNH--GELHPTPWIAGV 325 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTT--CCCCCHHHHHHH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCC--CCcCCHHHHHHH
Confidence 69999999999999865 8999999999999999999987665432211 111111111111111 235689999999
Q ss_pred HHhCCCeEEEE
Q 018194 267 AKRVGFEVVKE 277 (359)
Q Consensus 267 l~~aGF~~i~~ 277 (359)
|+++||++++.
T Consensus 326 l~~aGf~~~~~ 336 (352)
T 3mcz_A 326 VRDAGLAVGER 336 (352)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCceeee
Confidence 99999999873
No 72
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.81 E-value=5.5e-19 Score=162.43 Aligned_cols=159 Identities=17% Similarity=0.142 Sum_probs=119.8
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..++..++..++.+|||||||+|.++..+++. ++.+++++|+ +.++. +++....++.++++++.+|+. .+++ +
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~ 247 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--H 247 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--C
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-CCCC--C
Confidence 45666777888899999999999999999884 6779999999 45544 333333455678999999997 3455 8
Q ss_pred cceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 191 FDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
||+|++..++||+++. ..+|++++++|||||++++.++...............+..... .....++.+++.++|+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~---~~~~~~t~~e~~~ll~ 324 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAA---RTGQERTAAELEPLFT 324 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHT---TSCCCCBHHHHHHHHH
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhc---CCCcCCCHHHHHHHHH
Confidence 9999999999999987 6999999999999999999987665432222111111111111 1124568999999999
Q ss_pred hCCCeEEEEEe
Q 018194 269 RVGFEVVKEKD 279 (359)
Q Consensus 269 ~aGF~~i~~~~ 279 (359)
++||++++...
T Consensus 325 ~aGf~~~~~~~ 335 (348)
T 3lst_A 325 AAGLRLDRVVG 335 (348)
T ss_dssp HTTEEEEEEEE
T ss_pred HCCCceEEEEE
Confidence 99999998876
No 73
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.80 E-value=8.2e-19 Score=152.82 Aligned_cols=110 Identities=16% Similarity=0.305 Sum_probs=94.4
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
+.+.+...+. ++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.++++....+ .++++.++|+.+++++ +
T Consensus 23 ~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~-~ 95 (243)
T 3d2l_A 23 WVAWVLEQVE--PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP-E 95 (243)
T ss_dssp HHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS-S
T ss_pred HHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC-C
Confidence 4445555543 5689999999999999999886 799999999999999999987765 4689999999988765 7
Q ss_pred ccceEEecc-ccccc---CCHHHHHHHHHhccCCCCEEEEE
Q 018194 190 HFDGAYSIE-ATCHA---PKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~-~l~~~---~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+||+|++.. +++|+ .+...+++++.++|||||++++.
T Consensus 96 ~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 96 PVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 899999986 99998 45778999999999999999874
No 74
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.80 E-value=1.2e-19 Score=157.67 Aligned_cols=115 Identities=17% Similarity=0.289 Sum_probs=94.2
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 018194 107 TRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 186 (359)
.....+.+...+ .++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++. .+++++++|+.++++
T Consensus 27 ~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~ 97 (239)
T 3bxo_A 27 ASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL 97 (239)
T ss_dssp HHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC
T ss_pred HHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc
Confidence 334444455444 567899999999999999999863 49999999999999998874 358999999998876
Q ss_pred CCCccceEEe-cccccccC---CHHHHHHHHHhccCCCCEEEEEEeeeC
Q 018194 187 EDNHFDGAYS-IEATCHAP---KLEDVYAEVFRVLKPGSLYVSYEWVTT 231 (359)
Q Consensus 187 ~~~~fD~v~~-~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~ 231 (359)
+++||+|+| ..+++|++ +...+++++.++|||||++++.++...
T Consensus 98 -~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 98 -GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp -SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred -CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 678999995 45899984 567999999999999999999765443
No 75
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.80 E-value=8.4e-19 Score=148.49 Aligned_cols=144 Identities=16% Similarity=0.235 Sum_probs=114.0
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++.+.++|+.++++++++||+|++....
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIFCH 104 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEECCC
T ss_pred CCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEhhc
Confidence 456 9999999999999999986 67999999999999999999887764 6999999999988888899999996432
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
.+..+...+++++.++|||||.+++.++....... ...........++.+++.++|+ ||+++.....
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY-----------NTGGPKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG-----------TSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC-----------CCCCCCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 22246889999999999999999997765432110 0000011124678999999999 9999988766
Q ss_pred C
Q 018194 281 A 281 (359)
Q Consensus 281 ~ 281 (359)
.
T Consensus 172 ~ 172 (202)
T 2kw5_A 172 E 172 (202)
T ss_dssp E
T ss_pred E
Confidence 4
No 76
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.80 E-value=1e-19 Score=163.19 Aligned_cols=160 Identities=19% Similarity=0.284 Sum_probs=109.8
Q ss_pred CCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcC-------------------------------
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAG------------------------------- 169 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~------------------------------- 169 (359)
++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++....+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6789999999999999999986 46799999999999999998866543
Q ss_pred --------------------------CCCCeEEEEcCCCCCC-----CCCCccceEEecccccccC------CHHHHHHH
Q 018194 170 --------------------------LDSLCEVVCGNFLKMP-----FEDNHFDGAYSIEATCHAP------KLEDVYAE 212 (359)
Q Consensus 170 --------------------------~~~~i~~~~~d~~~~~-----~~~~~fD~v~~~~~l~~~~------~~~~~l~~ 212 (359)
.+.+++|.++|+...+ +..++||+|++..+++|+. ++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 2258999999998654 4678999999999997774 68899999
Q ss_pred HHhccCCCCEEEEEEeeeCcccc---cCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh--CCCeEEEEEecCCCCCCc
Q 018194 213 VFRVLKPGSLYVSYEWVTTDKYE---AENKEHVDIIQGIERGDALPGLRSYAEITEIAKR--VGFEVVKEKDLAKPPAQP 287 (359)
Q Consensus 213 ~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--aGF~~i~~~~~~~~~~~~ 287 (359)
++++|||||+|++...... .+. ............+ ...++++.++|.+ +||+.++...........
T Consensus 206 ~~~~LkpGG~lil~~~~~~-~y~~~~~~~~~~~~~~~~~--------~~~p~~~~~~L~~~~~GF~~~~~~~~~~~~~~g 276 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWS-SYGKRKTLTETIYKNYYRI--------QLKPEQFSSYLTSPDVGFSSYELVATPHNTSKG 276 (292)
T ss_dssp HHHHEEEEEEEEEECCCHH-HHHTTTTSCHHHHHHHHHC--------CCCGGGHHHHHTSTTTCCCEEEEC---------
T ss_pred HHHHhCCCcEEEEecCCch-hhhhhhcccHHHHhhhhcE--------EEcHHHHHHHHHhcCCCceEEEEeccCCCCCCC
Confidence 9999999999998421110 110 1111111111111 1235789999998 999988765543222334
Q ss_pred hhh
Q 018194 288 WWT 290 (359)
Q Consensus 288 w~~ 290 (359)
|.+
T Consensus 277 ~~r 279 (292)
T 3g07_A 277 FQR 279 (292)
T ss_dssp --C
T ss_pred ccc
Confidence 443
No 77
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.79 E-value=6.5e-18 Score=143.28 Aligned_cols=139 Identities=14% Similarity=0.076 Sum_probs=114.0
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
....++..+.+.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++....++ ++++++++|+.+.....
T Consensus 28 i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 28 VRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTS
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcC
Confidence 3455677788889999999999999999999986 358999999999999999999988887 58999999997654344
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|++..+++ +...+++++.++|||||++++...... +..++.++++
T Consensus 107 ~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------------~~~~~~~~l~ 156 (204)
T 3e05_A 107 PDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD---------------------------TLTKAVEFLE 156 (204)
T ss_dssp CCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH---------------------------HHHHHHHHHH
T ss_pred CCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc---------------------------cHHHHHHHHH
Confidence 7899999988765 788999999999999999998542211 2357888999
Q ss_pred hCCCeEEEEEec
Q 018194 269 RVGFEVVKEKDL 280 (359)
Q Consensus 269 ~aGF~~i~~~~~ 280 (359)
++|| .++...+
T Consensus 157 ~~g~-~~~~~~~ 167 (204)
T 3e05_A 157 DHGY-MVEVACV 167 (204)
T ss_dssp HTTC-EEEEEEE
T ss_pred HCCC-ceeEEEE
Confidence 9999 5544443
No 78
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.79 E-value=1.8e-18 Score=155.04 Aligned_cols=118 Identities=17% Similarity=0.267 Sum_probs=99.7
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCeEEEEcCCCCCC-
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLD---SLCEVVCGNFLKMP- 185 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~---~~i~~~~~d~~~~~- 185 (359)
+.+.+...+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.. .++.+..+|+.+++
T Consensus 45 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 45 YKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 3455555555567889999999999999999986 679999999999999999876443221 36789999998877
Q ss_pred --CCCCccceEEec-ccccccCC-------HHHHHHHHHhccCCCCEEEEEEe
Q 018194 186 --FEDNHFDGAYSI-EATCHAPK-------LEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 186 --~~~~~fD~v~~~-~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+++++||+|++. .+++|+++ +..+++++.++|||||++++...
T Consensus 124 ~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 124 DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 778999999998 89999999 99999999999999999998653
No 79
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.79 E-value=4e-18 Score=144.58 Aligned_cols=136 Identities=14% Similarity=0.181 Sum_probs=112.1
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
...++..+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++.+..+++++++++++|+.+.......
T Consensus 44 ~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 44 RALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 345666778888999999999999999999997 7899999999999999999999988877899999999883323457
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
||+|++...+ +.. +++++.++|||||++++...... +..++.+.+++.
T Consensus 123 ~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~---------------------------~~~~~~~~l~~~ 170 (204)
T 3njr_A 123 PEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE---------------------------SETLLTQLHARH 170 (204)
T ss_dssp CSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH---------------------------HHHHHHHHHHHH
T ss_pred CCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc---------------------------cHHHHHHHHHhC
Confidence 9999987744 566 99999999999999998532110 235777889999
Q ss_pred CCeEEEEEe
Q 018194 271 GFEVVKEKD 279 (359)
Q Consensus 271 GF~~i~~~~ 279 (359)
||++.....
T Consensus 171 g~~i~~i~~ 179 (204)
T 3njr_A 171 GGQLLRIDI 179 (204)
T ss_dssp CSEEEEEEE
T ss_pred CCcEEEEEe
Confidence 999887654
No 80
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.79 E-value=1.3e-19 Score=170.75 Aligned_cols=165 Identities=19% Similarity=0.219 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCe-EEEEcCC
Q 018194 103 HRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLC-EVVCGNF 181 (359)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i-~~~~~d~ 181 (359)
+........+.++..+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +.+... .+...+.
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~ 162 (416)
T 4e2x_A 88 MREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATA 162 (416)
T ss_dssp HHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhH
Confidence 44556667777888888888999999999999999999985 67999999999999998875 222111 1223344
Q ss_pred CCCCCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcC-CCCCCCCCH
Q 018194 182 LKMPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERG-DALPGLRSY 260 (359)
Q Consensus 182 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 260 (359)
..+++++++||+|++.++++|++|+..++++++++|||||++++....... .... ..+... .....+++.
T Consensus 163 ~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~--------~~~~-~~~~~~~~~~~~~~s~ 233 (416)
T 4e2x_A 163 DDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD--------IVAK-TSFDQIFDEHFFLFSA 233 (416)
T ss_dssp HHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH--------HHHH-TCGGGCSTTCCEECCH
T ss_pred hhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH--------hhhh-cchhhhhhhhhhcCCH
Confidence 444566789999999999999999999999999999999999986433211 0000 001000 112235689
Q ss_pred HHHHHHHHhCCCeEEEEEecC
Q 018194 261 AEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 261 ~~~~~~l~~aGF~~i~~~~~~ 281 (359)
+++.++++++||++++...+.
T Consensus 234 ~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 234 TSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEEEcc
Confidence 999999999999999988864
No 81
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.79 E-value=1.5e-18 Score=153.25 Aligned_cols=151 Identities=13% Similarity=0.122 Sum_probs=115.2
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCC----------------------------
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGL---------------------------- 170 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~---------------------------- 170 (359)
+..++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4456789999999999999988875224999999999999999988754320
Q ss_pred CCCe-EEEEcCCCCCC-CCC---CccceEEeccccc----ccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHH
Q 018194 171 DSLC-EVVCGNFLKMP-FED---NHFDGAYSIEATC----HAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH 241 (359)
Q Consensus 171 ~~~i-~~~~~d~~~~~-~~~---~~fD~v~~~~~l~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 241 (359)
..++ ++.++|+.+.+ +++ ++||+|++..+++ +.+++..+++++.++|||||++++.++.....+...
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~---- 208 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIG---- 208 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET----
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcC----
Confidence 0127 89999998864 355 7999999999999 566789999999999999999999874332211100
Q ss_pred HHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 242 VDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
.........+.+++.++|+++||++++.....
T Consensus 209 --------~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 209 --------EQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp --------TEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred --------CccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 00001234578899999999999999988764
No 82
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.78 E-value=1.6e-18 Score=154.97 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=113.4
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++ ++++.++|+.+.++ +++||+|++..++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVF 194 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccch
Confidence 46889999999999999999987 67999999999999999999988776 79999999998776 7899999999999
Q ss_pred cccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 201 CHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 201 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
+|++ +...+++++.++|||||.+++........... .......++..++.++++. |+++...
T Consensus 195 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 195 MFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC--------------PLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC--------------SSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC--------------CCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 9985 46699999999999999988865544332211 1112234567788888864 9888765
Q ss_pred e
Q 018194 279 D 279 (359)
Q Consensus 279 ~ 279 (359)
.
T Consensus 259 ~ 259 (286)
T 3m70_A 259 E 259 (286)
T ss_dssp C
T ss_pred c
Confidence 3
No 83
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.78 E-value=2.2e-18 Score=154.84 Aligned_cols=160 Identities=12% Similarity=0.075 Sum_probs=111.3
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-----CeEEEEcCCCC------C--CCC
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS-----LCEVVCGNFLK------M--PFE 187 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~-----~i~~~~~d~~~------~--~~~ 187 (359)
.++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+... +++|.+.|+.. + +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3578999999999986666665445799999999999999999987665321 26788888832 2 245
Q ss_pred CCccceEEeccccccc---CCHHHHHHHHHhccCCCCEEEEEEeeeCcccccC---------c-hHHHHH----------
Q 018194 188 DNHFDGAYSIEATCHA---PKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAE---------N-KEHVDI---------- 244 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---------~-~~~~~~---------- 244 (359)
+++||+|+|.++++|+ .+...++++++++|||||++++............ . .....+
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 6899999999999875 4678999999999999999998664321100000 0 000000
Q ss_pred Hhhh-hcC--CCCC-CCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 245 IQGI-ERG--DALP-GLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 245 ~~~~-~~~--~~~~-~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
...+ ..+ ...+ .+.+++++.++++++||++++...+
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 0000 011 1111 2667899999999999999998776
No 84
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=1.5e-18 Score=151.45 Aligned_cols=152 Identities=15% Similarity=0.075 Sum_probs=117.1
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-----CccceE
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED-----NHFDGA 194 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~fD~v 194 (359)
+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++.. ..+++++++|+.+++... ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~-~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF-PRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS-SCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC-CCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEE
Confidence 5678899999999999999999864 499999999999999998762 247999999998865321 248999
Q ss_pred EecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccc---------cCchHHHHHHhhhhcCCCCCCCCCHHHH
Q 018194 195 YSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYE---------AENKEHVDIIQGIERGDALPGLRSYAEI 263 (359)
Q Consensus 195 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (359)
++..+++|++ +...+++++.++|||||++++.++....... ..... ..........+...+.+++
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 204 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYE----LLLVMEHGIRPGIFTAEDI 204 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHH----HHHHHTTTCCCCCCCHHHH
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchh----hhhccccCCCCCccCHHHH
Confidence 9999999998 8899999999999999999998876532100 00000 1112222333455788999
Q ss_pred HHHHHhCCCeEEEEEecCC
Q 018194 264 TEIAKRVGFEVVKEKDLAK 282 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~~~ 282 (359)
.+++ +||+++.......
T Consensus 205 ~~~~--aGf~~~~~~~~~~ 221 (245)
T 3ggd_A 205 ELYF--PDFEILSQGEGLF 221 (245)
T ss_dssp HHHC--TTEEEEEEECCBC
T ss_pred HHHh--CCCEEEecccccc
Confidence 9999 9999999877643
No 85
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.78 E-value=4.6e-18 Score=157.31 Aligned_cols=157 Identities=16% Similarity=0.166 Sum_probs=117.4
Q ss_pred HHHHHhcC-CCCCCEEEEECCCCChHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 112 EMAVDLID-VKAGDRILDVGCGVGGPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 112 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
..++..++ ..++.+|||||||+|.++..+++ .++.+++++|+ +.+++.+++. ++++++.+|+.+ +++.+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCCC
Confidence 34455554 66778999999999999999988 46789999999 8888776532 479999999987 66654
Q ss_pred ccceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchH----HHHHHhhhhcCCCCCCCCCHHHH
Q 018194 190 HFDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKE----HVDIIQGIERGDALPGLRSYAEI 263 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 263 (359)
|+|++..++|++++. ..+|++++++|||||++++.|............. ...+....... ....++.+++
T Consensus 263 --D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~g~~rt~~e~ 338 (368)
T 3reo_A 263 --DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNP--GGKERTEKEF 338 (368)
T ss_dssp --SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSS--BCCCCCHHHH
T ss_pred --CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcC--CCccCCHHHH
Confidence 999999999999864 4899999999999999999987764432221111 11111111101 1235688999
Q ss_pred HHHHHhCCCeEEEEEecC
Q 018194 264 TEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~~ 281 (359)
.++|+++||+++++....
T Consensus 339 ~~ll~~AGF~~v~~~~~~ 356 (368)
T 3reo_A 339 QALAMASGFRGFKVASCA 356 (368)
T ss_dssp HHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHCCCeeeEEEEeC
Confidence 999999999999987663
No 86
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.78 E-value=6.6e-18 Score=155.94 Aligned_cols=156 Identities=21% Similarity=0.213 Sum_probs=118.0
Q ss_pred HHHHHhcC-CCCCCEEEEECCCCChHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 112 EMAVDLID-VKAGDRILDVGCGVGGPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 112 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
..++..++ ..++.+|||||||+|.++..+++ .++.+++++|+ +.+++.+++. ++++++.+|+.+ +++.+
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p~~ 260 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVPSG 260 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCCCC
Confidence 34555555 67788999999999999999988 47789999999 8888776532 479999999988 77754
Q ss_pred ccceEEecccccccCC--HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchH----HHHHHhhhhcCCCCCCCCCHHHH
Q 018194 190 HFDGAYSIEATCHAPK--LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKE----HVDIIQGIERGDALPGLRSYAEI 263 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 263 (359)
|+|++..++|++++ ...+|++++++|||||++++.|............. ...+........ ...++.++|
T Consensus 261 --D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~--g~~rt~~e~ 336 (364)
T 3p9c_A 261 --DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPG--GRERYEREF 336 (364)
T ss_dssp --SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSS--CCCCBHHHH
T ss_pred --CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccC--CccCCHHHH
Confidence 99999999999975 46899999999999999999987765432221111 111111101111 234688999
Q ss_pred HHHHHhCCCeEEEEEec
Q 018194 264 TEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~ 280 (359)
.++|+++||++++...+
T Consensus 337 ~~ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 337 QALARGAGFTGVKSTYI 353 (364)
T ss_dssp HHHHHHTTCCEEEEEEE
T ss_pred HHHHHHCCCceEEEEEc
Confidence 99999999999998766
No 87
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.78 E-value=1.3e-17 Score=153.25 Aligned_cols=162 Identities=14% Similarity=0.140 Sum_probs=124.0
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..++..++..+..+|||||||+|.++..+++ +|+.+++..|. |.+++.++++....+ .++|+++.+|+.+.+.+ .
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~~--~ 244 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPLP--E 244 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCCC--C
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCCC--C
Confidence 4455666777788999999999999999998 57889999998 889999998876544 57899999999876544 4
Q ss_pred cceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCc-hHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 018194 191 FDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAEN-KEHVDIIQGIERGDALPGLRSYAEITEIA 267 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (359)
+|+|++..++|+++|. ..+|+++++.|+|||++++.|....+...... .....+.... ..++ ..++.++|.++|
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~-~~~g--~ert~~e~~~ll 321 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLV-QTEG--QERTPTHYHMLL 321 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHH-SSSC--CCCCHHHHHHHH
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHH-hCCC--cCCCHHHHHHHH
Confidence 7999999999999875 57899999999999999999976643322211 1111111111 1122 346899999999
Q ss_pred HhCCCeEEEEEec
Q 018194 268 KRVGFEVVKEKDL 280 (359)
Q Consensus 268 ~~aGF~~i~~~~~ 280 (359)
+++||+++++...
T Consensus 322 ~~AGf~~v~v~~~ 334 (353)
T 4a6d_A 322 SSAGFRDFQFKKT 334 (353)
T ss_dssp HHHTCEEEEEECC
T ss_pred HHCCCceEEEEEc
Confidence 9999999988665
No 88
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.77 E-value=6e-18 Score=140.06 Aligned_cols=137 Identities=17% Similarity=0.188 Sum_probs=111.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
.....++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.++++....+++.++ ++.+|+.+ .++
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~~ 89 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AFD 89 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GGG
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hhh
Confidence 34456667778888999999999999999999985 4689999999999999999999988887788 88888855 333
Q ss_pred C--CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHH
Q 018194 188 D--NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITE 265 (359)
Q Consensus 188 ~--~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (359)
. ++||+|++..++++ ..+++++.++|||||++++...... +...+.+
T Consensus 90 ~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~---------------------------~~~~~~~ 138 (178)
T 3hm2_A 90 DVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE---------------------------SEQMLWA 138 (178)
T ss_dssp GCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH---------------------------HHHHHHH
T ss_pred ccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc---------------------------cHHHHHH
Confidence 3 78999999998877 6789999999999999998643211 2346778
Q ss_pred HHHhCCCeEEEEE
Q 018194 266 IAKRVGFEVVKEK 278 (359)
Q Consensus 266 ~l~~aGF~~i~~~ 278 (359)
++++.|+++....
T Consensus 139 ~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 139 LRKQFGGTISSFA 151 (178)
T ss_dssp HHHHHCCEEEEEE
T ss_pred HHHHcCCeeEEEE
Confidence 8888998887654
No 89
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.77 E-value=1.3e-17 Score=147.87 Aligned_cols=158 Identities=16% Similarity=0.118 Sum_probs=114.3
Q ss_pred HHHHHHHHhcC-CCCCCEEEEECCCC---ChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 018194 109 LHEEMAVDLID-VKAGDRILDVGCGV---GGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK 183 (359)
Q Consensus 109 ~~~~~~~~~~~-~~~~~~vLDiGcG~---G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 183 (359)
.+.+.++..+. ..+..+|||||||+ |.++..+.+. ++.+|+++|+|+.|++.|+++... .++++++++|+.+
T Consensus 63 ~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 63 KVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRD 139 (274)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTC
T ss_pred HHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCC
Confidence 33444444443 33457999999999 9887766653 678999999999999999998743 3579999999976
Q ss_pred CC-----------CCCCccceEEecccccccCC--HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhc
Q 018194 184 MP-----------FEDNHFDGAYSIEATCHAPK--LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIER 250 (359)
Q Consensus 184 ~~-----------~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (359)
.+ ++..+||+|++..++||+++ +..+|++++++|||||+|++.++.... . .........+..
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~---~~~~~~~~~~~~ 214 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--L---PAQQKLARITRE 214 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--C---HHHHHHHHHHHH
T ss_pred chhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--h---HHHHHHHHHHHh
Confidence 31 23358999999999999987 899999999999999999998865421 1 111111111111
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCeEEE
Q 018194 251 GDALPGLRSYAEITEIAKRVGFEVVK 276 (359)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~aGF~~i~ 276 (359)
......+++.+++.++| .||++++
T Consensus 215 ~~~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 215 NLGEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HHSCCCCBCHHHHHHTT--TTCEECT
T ss_pred cCCCCccCCHHHHHHHh--CCCeEcc
Confidence 01112457899999999 5998765
No 90
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=3.1e-18 Score=146.57 Aligned_cols=115 Identities=18% Similarity=0.215 Sum_probs=99.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
.....+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... .+++++++|+.+++ ++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-CS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-CC
Confidence 44455666677778899999999999999999986 469999999999999999987653 37999999999987 67
Q ss_pred CccceEEecccccccCCH---HHHHHHHHhccCCCCEEEEEEe
Q 018194 189 NHFDGAYSIEATCHAPKL---EDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
++||+|++..+++|++++ ..+++++.++|||||.+++...
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 899999999999999987 5779999999999999998643
No 91
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.77 E-value=7e-19 Score=152.83 Aligned_cols=107 Identities=21% Similarity=0.303 Sum_probs=89.4
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEe-
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--PFEDNHFDGAYS- 196 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~v~~- 196 (359)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....+ .+++++++|+.++ ++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 45788999999999999999987544599999999999999999887655 5799999999887 788899999999
Q ss_pred ccccc----ccCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 197 IEATC----HAPKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 197 ~~~l~----~~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
.+.+. +..+...++++++++|||||++++.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 55441 122455789999999999999998653
No 92
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=1.3e-17 Score=139.80 Aligned_cols=129 Identities=21% Similarity=0.267 Sum_probs=109.3
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEec-c
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSI-E 198 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~-~ 198 (359)
+.++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++. .+++++++|+.+.++++++||+|++. .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCc
Confidence 457889999999999999999986 679999999999999998875 25899999999988878899999998 6
Q ss_pred cccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEE
Q 018194 199 ATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVK 276 (359)
Q Consensus 199 ~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~ 276 (359)
+++|++ +...+++++.++|+|||.+++..... ..++..++.++++++||++++
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~-------------------------~~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALGADGRAVIGFGAG-------------------------RGWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT-------------------------SSCCHHHHHHHHHHHTEEEEE
T ss_pred HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC-------------------------CCcCHHHHHHHHHHcCCEEee
Confidence 888874 56899999999999999999853211 114678999999999999988
Q ss_pred EEec
Q 018194 277 EKDL 280 (359)
Q Consensus 277 ~~~~ 280 (359)
....
T Consensus 172 ~~~~ 175 (195)
T 3cgg_A 172 AFES 175 (195)
T ss_dssp EESS
T ss_pred eecc
Confidence 7543
No 93
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.76 E-value=5.4e-18 Score=143.89 Aligned_cols=138 Identities=14% Similarity=0.056 Sum_probs=112.5
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
....+.+... +.++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|+++....++.. +++.++|+.+. .
T Consensus 48 ~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~--~ 122 (205)
T 3grz_A 48 QLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLAD--V 122 (205)
T ss_dssp HHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTT--C
T ss_pred HHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEecccccc--C
Confidence 3333444433 35788999999999999999988655699999999999999999999888764 99999999774 3
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHH
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIA 267 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (359)
+++||+|++...+++ ...+++++.++|||||++++.++... +.+++.+++
T Consensus 123 ~~~fD~i~~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~---------------------------~~~~~~~~~ 172 (205)
T 3grz_A 123 DGKFDLIVANILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL---------------------------QLPKIEQAL 172 (205)
T ss_dssp CSCEEEEEEESCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG---------------------------GHHHHHHHH
T ss_pred CCCceEEEECCcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc---------------------------cHHHHHHHH
Confidence 589999999887765 47889999999999999998654332 246888999
Q ss_pred HhCCCeEEEEEec
Q 018194 268 KRVGFEVVKEKDL 280 (359)
Q Consensus 268 ~~aGF~~i~~~~~ 280 (359)
+++||++++....
T Consensus 173 ~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 173 AENSFQIDLKMRA 185 (205)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHcCCceEEeecc
Confidence 9999999987664
No 94
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.76 E-value=7.9e-18 Score=144.00 Aligned_cols=143 Identities=16% Similarity=0.131 Sum_probs=108.7
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCCCc
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM---PFEDNH 190 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~ 190 (359)
..++++||++|||+|||+|.++..+++. +..+|+++|+|+.|++.+++++.+. .|+..+.+|..+. ++..++
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccce
Confidence 3467899999999999999999999986 4579999999999999999887654 4799999998763 355688
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
+|+|++. +.+..+...++.++.+.|||||++++.............. ....+..+.|+++
T Consensus 148 vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~------------------~~~~~ev~~L~~~ 207 (233)
T 4df3_A 148 VDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPS------------------EVYKREIKTLMDG 207 (233)
T ss_dssp EEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCC------------------HHHHHHHHHHHHT
T ss_pred EEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChH------------------HHHHHHHHHHHHC
Confidence 9999864 3444578899999999999999999864332211110000 0113455678999
Q ss_pred CCeEEEEEecC
Q 018194 271 GFEVVKEKDLA 281 (359)
Q Consensus 271 GF~~i~~~~~~ 281 (359)
||++++..++.
T Consensus 208 GF~l~e~i~L~ 218 (233)
T 4df3_A 208 GLEIKDVVHLD 218 (233)
T ss_dssp TCCEEEEEECT
T ss_pred CCEEEEEEccC
Confidence 99999987763
No 95
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.76 E-value=2.1e-19 Score=156.05 Aligned_cols=105 Identities=24% Similarity=0.338 Sum_probs=90.4
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEe--
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--PFEDNHFDGAYS-- 196 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~v~~-- 196 (359)
.+|.+|||||||+|..+..+++..+.+|++||+|+.+++.|+++....+ .++.++.+|+.+. ++++++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEee
Confidence 4788999999999999999998655799999999999999999987765 4688999998764 467889999874
Q ss_pred ---cccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 197 ---IEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 197 ---~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...++|.+++..++++++|+|||||+|++.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5667788899999999999999999998743
No 96
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.76 E-value=4.8e-18 Score=141.75 Aligned_cols=143 Identities=11% Similarity=0.089 Sum_probs=104.5
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEec
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FEDNHFDGAYSI 197 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~v~~~ 197 (359)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....++ .++++++.|+..++ +.+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 3567899999999999999999997 78999999999999999999998887 68999998887743 446889999887
Q ss_pred c-cccc--------cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 198 E-ATCH--------APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 198 ~-~l~~--------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
. .+.+ ..+...+++++.++|||||++++..+...... ..... ...++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~----------------~~~~~~~~l~ 157 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGG---DMEKD----------------AVLEYVIGLD 157 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---------CHHHH----------------HHHHHHHHSC
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCC---HHHHH----------------HHHHHHHhCC
Confidence 3 2221 12456889999999999999998765432110 00100 1134445556
Q ss_pred hCCCeEEEEEecCC
Q 018194 269 RVGFEVVKEKDLAK 282 (359)
Q Consensus 269 ~aGF~~i~~~~~~~ 282 (359)
..+|.+.....+..
T Consensus 158 ~~~~~~~~~~~~~~ 171 (185)
T 3mti_A 158 QRVFTAMLYQPLNQ 171 (185)
T ss_dssp TTTEEEEEEEESSC
T ss_pred CceEEEEEehhhcc
Confidence 67899888776643
No 97
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.75 E-value=6.9e-18 Score=156.48 Aligned_cols=155 Identities=14% Similarity=0.187 Sum_probs=117.9
Q ss_pred HHHHHhcC-CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 112 EMAVDLID-VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 112 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
..++..++ ..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++. ++++++.+|+.+ +++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~~~- 267 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SVPQ- 267 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC-
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CCCC-
Confidence 34555554 667889999999999999999985 5689999999 9999877541 369999999987 6654
Q ss_pred ccceEEecccccccCCHH--HHHHHHHhccCCCCEEEEEEeeeCcccccCc----hHHHHHHhhhhcCCCCCCCCCHHHH
Q 018194 190 HFDGAYSIEATCHAPKLE--DVYAEVFRVLKPGSLYVSYEWVTTDKYEAEN----KEHVDIIQGIERGDALPGLRSYAEI 263 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (359)
||+|++..++||+++.. .+|++++++|||||++++.++.......... .....+......+ ...++.+++
T Consensus 268 -~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~t~~e~ 343 (372)
T 1fp1_D 268 -GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVG---GRERTEKQY 343 (372)
T ss_dssp -EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHS---CCCEEHHHH
T ss_pred -CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccC---CccCCHHHH
Confidence 99999999999999877 9999999999999999999877643321110 1111111111111 134588999
Q ss_pred HHHHHhCCCeEEEEEec
Q 018194 264 TEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 264 ~~~l~~aGF~~i~~~~~ 280 (359)
.++|+++||++++....
T Consensus 344 ~~ll~~aGf~~~~~~~~ 360 (372)
T 1fp1_D 344 EKLSKLSGFSKFQVACR 360 (372)
T ss_dssp HHHHHHTTCSEEEEEEE
T ss_pred HHHHHHCCCceEEEEEc
Confidence 99999999999988764
No 98
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.75 E-value=2.6e-17 Score=143.30 Aligned_cols=133 Identities=14% Similarity=0.149 Sum_probs=108.2
Q ss_pred CCCCCCEEEEECCCCChHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC---CCccceE
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE---DNHFDGA 194 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~v 194 (359)
.+.++.+|||||||+|..+..++. .++.+|+|+|+|+.|++.++++....++. +++++++|+.+++++ +++||+|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEE
Confidence 335778999999999999999986 36789999999999999999999888875 699999999887653 5789999
Q ss_pred EecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeE
Q 018194 195 YSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEV 274 (359)
Q Consensus 195 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 274 (359)
++.. +.++..+++++.++|||||++++...... .. ...++.+.++++||++
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~-------~~------------------~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALKAASA-------EE------------------ELNAGKKAITTLGGEL 196 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-C-------HH------------------HHHHHHHHHHHTTEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc-------hH------------------HHHHHHHHHHHcCCeE
Confidence 9976 46789999999999999999988521100 00 1246778899999999
Q ss_pred EEEEecC
Q 018194 275 VKEKDLA 281 (359)
Q Consensus 275 i~~~~~~ 281 (359)
++...+.
T Consensus 197 ~~~~~~~ 203 (240)
T 1xdz_A 197 ENIHSFK 203 (240)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 8877654
No 99
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.75 E-value=8.8e-18 Score=146.36 Aligned_cols=164 Identities=17% Similarity=0.151 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHhcCC-CCCCEEEEECCCC--ChHHHHHHh--hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC
Q 018194 106 ATRLHEEMAVDLIDV-KAGDRILDVGCGV--GGPMRAIAA--HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGN 180 (359)
Q Consensus 106 ~~~~~~~~~~~~~~~-~~~~~vLDiGcG~--G~~~~~l~~--~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d 180 (359)
..+.+...+...+.. ....+|||||||+ +..+..+++ .++++|+++|.|+.|++.|+++....+ ..+++|+++|
T Consensus 61 ~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD 139 (277)
T 3giw_A 61 ANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEAD 139 (277)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECC
T ss_pred HHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEec
Confidence 344455555555542 2346999999997 445566655 378999999999999999999876432 2479999999
Q ss_pred CCCCC----CC--CCccc-----eEEecccccccCC---HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHh
Q 018194 181 FLKMP----FE--DNHFD-----GAYSIEATCHAPK---LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQ 246 (359)
Q Consensus 181 ~~~~~----~~--~~~fD-----~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
+.+.+ .+ .+.|| .|+++.+|||+++ +..+++++.+.|+|||+|++.+..... .+ .....+..
T Consensus 140 ~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~--~p--~~~~~~~~ 215 (277)
T 3giw_A 140 MLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEF--AP--QEVGRVAR 215 (277)
T ss_dssp TTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTT--SH--HHHHHHHH
T ss_pred ccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCC--CH--HHHHHHHH
Confidence 98852 01 24566 5889999999987 578999999999999999998765431 11 11222222
Q ss_pred hhhcCCCCCCCCCHHHHHHHHHhCCCeEEE
Q 018194 247 GIERGDALPGLRSYAEITEIAKRVGFEVVK 276 (359)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~ 276 (359)
.+........+++.+++.++|. ||++++
T Consensus 216 ~~~~~g~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 216 EYAARNMPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHTTCCCCCCCHHHHHHTTT--TSEECT
T ss_pred HHHhcCCCCccCCHHHHHHHhC--CCcccC
Confidence 2222222235789999999994 999764
No 100
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.75 E-value=1e-17 Score=152.86 Aligned_cols=130 Identities=18% Similarity=0.256 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHH-------HHcCC-CCCe
Q 018194 104 RDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHN-------KKAGL-DSLC 174 (359)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~-------~~~~~-~~~i 174 (359)
.+........++..+.+.++.+|||||||+|.++..++...++ +|+|||+|+.+++.|++.. ...++ ..+|
T Consensus 155 GEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV 234 (438)
T 3uwp_A 155 GETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY 234 (438)
T ss_dssp GGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 3444555666778888999999999999999999999976565 5999999999999998754 34455 3689
Q ss_pred EEEEcCCCCCCCCC--CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCccc
Q 018194 175 EVVCGNFLKMPFED--NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKY 234 (359)
Q Consensus 175 ~~~~~d~~~~~~~~--~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 234 (359)
+|+++|+.++++++ ..||+|+++..+ +.++....|.+++++|||||+|++.+......+
T Consensus 235 efi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 235 TLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp EEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred EEEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 99999999987643 479999997765 457899999999999999999999876665544
No 101
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.75 E-value=1.3e-17 Score=143.89 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=100.3
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCCCCC-CCccceEEecc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF-LKMPFE-DNHFDGAYSIE 198 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~fD~v~~~~ 198 (359)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .++++++++|+ ..+|++ +++||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 56889999999999999999997 68999999999999999887 24699999999 567777 8899999987
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
.++..+++++.++|||||+++.. . ...+..++.+.++++||+++...
T Consensus 119 -----~~~~~~l~~~~~~LkpgG~l~~~--~--------------------------~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 119 -----RGPTSVILRLPELAAPDAHFLYV--G--------------------------PRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp -----SCCSGGGGGHHHHEEEEEEEEEE--E--------------------------SSSCCTHHHHHHHHTTCEEEEEE
T ss_pred -----CCHHHHHHHHHHHcCCCcEEEEe--C--------------------------CcCCHHHHHHHHHHCCCeEEEEE
Confidence 47788999999999999999811 0 11234588999999999998876
Q ss_pred ec
Q 018194 279 DL 280 (359)
Q Consensus 279 ~~ 280 (359)
..
T Consensus 166 ~~ 167 (226)
T 3m33_A 166 HV 167 (226)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 102
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=142.28 Aligned_cols=114 Identities=23% Similarity=0.293 Sum_probs=97.8
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 199 (359)
..++.+|||||||+|.++..++ .+|+|+|+|+. ++.+.++|+.++++++++||+|++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR----NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehh
Confidence 4577899999999999988773 69999999987 368899999998888889999999999
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEe
Q 018194 200 TCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKD 279 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~ 279 (359)
+++ +++..+++++.++|+|||++++.++... ..+.+++.++|+++||+++....
T Consensus 125 l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~-------------------------~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 125 LMG-TNIRDFLEEANRVLKPGGLLKVAEVSSR-------------------------FEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp CCS-SCHHHHHHHHHHHEEEEEEEEEEECGGG-------------------------CSCHHHHHHHHHHTTEEEEEEEC
T ss_pred ccc-cCHHHHHHHHHHhCCCCeEEEEEEcCCC-------------------------CCCHHHHHHHHHHCCCEEEEEec
Confidence 975 8999999999999999999999764321 12678999999999999988654
No 103
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.74 E-value=2.1e-16 Score=136.52 Aligned_cols=133 Identities=19% Similarity=0.190 Sum_probs=105.5
Q ss_pred CCCCCCEEEEECCC-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccceEEe
Q 018194 119 DVKAGDRILDVGCG-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-PFEDNHFDGAYS 196 (359)
Q Consensus 119 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~v~~ 196 (359)
.+.++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|+++....++ +++++++|+..+ ++++++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEE
Confidence 45688999999999 99999999986578999999999999999999998876 799999997543 455689999999
Q ss_pred cccccccCC-------------------HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCC
Q 018194 197 IEATCHAPK-------------------LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGL 257 (359)
Q Consensus 197 ~~~l~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (359)
+..+++.++ ...+++++.++|||||++++......
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------------------- 183 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------------------------- 183 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH--------------------------
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH--------------------------
Confidence 866654432 47899999999999999998521100
Q ss_pred CCHHHHHHHHHhCCCeEEEEEe
Q 018194 258 RSYAEITEIAKRVGFEVVKEKD 279 (359)
Q Consensus 258 ~~~~~~~~~l~~aGF~~i~~~~ 279 (359)
....++.++++++||++.....
T Consensus 184 ~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 184 KLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHcCCceEEEEe
Confidence 0235788899999998766543
No 104
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.74 E-value=5.5e-18 Score=145.25 Aligned_cols=152 Identities=14% Similarity=0.173 Sum_probs=107.4
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHH----HHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLH----NKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~----~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
..+...++.+|||||||+|.++..+++. ++.+|+|+|+|+.|++.+.+. ....++ ++++++++|+.++++++++
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~ 99 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV 99 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC
Confidence 3444668899999999999999999985 478999999999988864332 223444 3799999999999887766
Q ss_pred cceEEecc---cc--cccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCC---CCHHH
Q 018194 191 FDGAYSIE---AT--CHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGL---RSYAE 262 (359)
Q Consensus 191 fD~v~~~~---~l--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 262 (359)
|.|+... .+ +|++++..+++++.++|||||++++.... .. +...... . ...+.. +..+.
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~-~~~~~~~-------~---~~~~~~~~~~~~~~ 166 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNL-HA-WRPSVPE-------V---GEHPEPTPDSADEW 166 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEG-GG-BTTBCGG-------G---TTCCCCCHHHHHHH
T ss_pred -CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecc-cc-ccccccc-------c---ccCCccchHHHHHH
Confidence 7766333 22 26778899999999999999999984211 11 1111110 0 011111 12345
Q ss_pred HHHHHHhCCCeEEEEEecC
Q 018194 263 ITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 263 ~~~~l~~aGF~~i~~~~~~ 281 (359)
+.++++++||++.+.+.+.
T Consensus 167 l~~~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 167 LAPRYAEAGWKLADCRYLE 185 (218)
T ss_dssp HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHcCCCceeeeccc
Confidence 7889999999999988764
No 105
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.74 E-value=5.4e-17 Score=140.28 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=106.1
Q ss_pred HHhcCCCCCCEEEEECCCCChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----CCCCCC
Q 018194 115 VDLIDVKAGDRILDVGCGVGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK----MPFEDN 189 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~ 189 (359)
+..+.+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++... .++.++.+|+.+ .+++ +
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-C
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccC-c
Confidence 445567788999999999999999999863 479999999999999999886543 579999999988 6665 7
Q ss_pred ccceEEecccccccCCH---HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 018194 190 HFDGAYSIEATCHAPKL---EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEI 266 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
+||+|+ ++++++ ..+++++.++|||||++++. +..... ....... .+ ..+++. +
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~-~~~~~~~-~~--------------~~~~l~-~ 199 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSI-DVTKDPK-EI--------------FKEQKE-I 199 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGT-CSSSCHH-HH--------------HHHHHH-H
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCC-CCCCCHH-Hh--------------hHHHHH-H
Confidence 899998 344555 77899999999999999986 322111 1100000 10 125677 8
Q ss_pred HHhCCCeEEEEEec
Q 018194 267 AKRVGFEVVKEKDL 280 (359)
Q Consensus 267 l~~aGF~~i~~~~~ 280 (359)
|+++||++++..++
T Consensus 200 l~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 200 LEAGGFKIVDEVDI 213 (230)
T ss_dssp HHHHTEEEEEEEEC
T ss_pred HHHCCCEEEEEEcc
Confidence 99999999988776
No 106
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.74 E-value=3.8e-17 Score=143.84 Aligned_cols=141 Identities=16% Similarity=0.171 Sum_probs=114.3
Q ss_pred HHHHhcCCC-CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCC
Q 018194 113 MAVDLIDVK-AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FEDN 189 (359)
Q Consensus 113 ~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~ 189 (359)
.+...+... ++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...++.++++++++|+.+.+ ++.+
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~ 118 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKE 118 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTT
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccC
Confidence 345566777 8899999999999999999987556999999999999999999999998888999999998865 4578
Q ss_pred ccceEEeccccccc--------------------CCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhh
Q 018194 190 HFDGAYSIEATCHA--------------------PKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIE 249 (359)
Q Consensus 190 ~fD~v~~~~~l~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
+||+|+++-.+... .+...+++.+.++|||||+++++. .
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~---~------------------ 177 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH---R------------------ 177 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE---C------------------
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE---c------------------
Confidence 99999997544322 134679999999999999999841 0
Q ss_pred cCCCCCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 250 RGDALPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
.....++.+.+++.||.......+.
T Consensus 178 -------~~~~~~~~~~l~~~~~~~~~~~~v~ 202 (259)
T 3lpm_A 178 -------PERLLDIIDIMRKYRLEPKRIQFVH 202 (259)
T ss_dssp -------TTTHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -------HHHHHHHHHHHHHCCCceEEEEEee
Confidence 1134578888999999998877653
No 107
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.74 E-value=2.5e-17 Score=149.16 Aligned_cols=160 Identities=17% Similarity=0.188 Sum_probs=113.8
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcC------CCCCeEEEEcCCCCCC----CC--C
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAG------LDSLCEVVCGNFLKMP----FE--D 188 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~------~~~~i~~~~~d~~~~~----~~--~ 188 (359)
.++.+|||+|||+|.++..+++..+.+|+|+|+|+.|++.++++....+ ...+++++++|+.+.+ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3678999999999999999988666799999999999999999876542 2246999999999875 53 4
Q ss_pred CccceEEeccccccc-C---CHHHHHHHHHhccCCCCEEEEEEeeeCcc-----------cccC-----ch---HHHHHH
Q 018194 189 NHFDGAYSIEATCHA-P---KLEDVYAEVFRVLKPGSLYVSYEWVTTDK-----------YEAE-----NK---EHVDII 245 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~-~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----------~~~~-----~~---~~~~~~ 245 (359)
++||+|++..+++|+ . ++..+++++.++|||||.+++..+..... +... .. ....+.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999987 3 46799999999999999999875432100 0000 00 000000
Q ss_pred hh--hh--cC-CCCCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 246 QG--IE--RG-DALPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 246 ~~--~~--~~-~~~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
.. +. .. .......+.+++.+++++.||+++....+
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 00 00 00 00011357789999999999999998765
No 108
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.74 E-value=1.1e-17 Score=141.07 Aligned_cols=145 Identities=15% Similarity=0.176 Sum_probs=109.7
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEE
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FEDNHFDGAY 195 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~v~ 195 (359)
.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++....++..+++++++|+.+++ +.+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 4567899999999999999999986 447999999999999999999999887678999999998875 5568999999
Q ss_pred ecccccc---------cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHH
Q 018194 196 SIEATCH---------APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEI 266 (359)
Q Consensus 196 ~~~~l~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
+...+.. ..+...+++++.++|||||++++..+...... ...... ..++.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~---~~~~~~----------------~~~~~~~ 159 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTG---FEEKEK----------------VLEFLKG 159 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTB---SHHHHH----------------HHHHHTT
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCc---HHHHHH----------------HHHHHHh
Confidence 8875411 11456899999999999999998765432111 111110 1233334
Q ss_pred HHhCCCeEEEEEecCC
Q 018194 267 AKRVGFEVVKEKDLAK 282 (359)
Q Consensus 267 l~~aGF~~i~~~~~~~ 282 (359)
+...+|.+.....+..
T Consensus 160 l~~~~~~v~~~~~~~~ 175 (197)
T 3eey_A 160 VDQKKFIVQRTDFINQ 175 (197)
T ss_dssp SCTTTEEEEEEEETTC
T ss_pred CCCCcEEEEEEEeccC
Confidence 4567899988877654
No 109
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.73 E-value=7.6e-17 Score=137.78 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=105.4
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEec
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FEDNHFDGAYSI 197 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~v~~~ 197 (359)
.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...++ .+++++++|+.+++ +++++||+|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 35779999999999999999985 568999999999999999999988887 58999999999876 677899999998
Q ss_pred ccccccC--------CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 198 EATCHAP--------KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 198 ~~l~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
....+.. ....+++++.++|||||.+++.... .. ....+.+.+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------~~------------------~~~~~~~~~~~ 171 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN---------RG------------------LFEYSLVSFSQ 171 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC---------HH------------------HHHHHHHHHHH
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC---------HH------------------HHHHHHHHHHH
Confidence 7644322 2368999999999999999884210 00 01466778889
Q ss_pred CCCeEEEEE
Q 018194 270 VGFEVVKEK 278 (359)
Q Consensus 270 aGF~~i~~~ 278 (359)
+||+.+...
T Consensus 172 ~g~~~~~~~ 180 (214)
T 1yzh_A 172 YGMKLNGVW 180 (214)
T ss_dssp HTCEEEEEE
T ss_pred CCCeeeecc
Confidence 999988765
No 110
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.73 E-value=9.6e-17 Score=133.20 Aligned_cols=134 Identities=18% Similarity=0.253 Sum_probs=111.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.+...+...++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.++++....++ .+++++++|+.+ ++++
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~~~~ 98 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-VLDK 98 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-HGGG
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-cccC
Confidence 3445566677778889999999999999999998 678999999999999999999988876 479999999987 6666
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|++..+ .+...+++++.++ |||.+++...... ...++.+.|+
T Consensus 99 ~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~---------------------------~~~~~~~~l~ 145 (183)
T 2yxd_A 99 LEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE---------------------------NAAKIINEFE 145 (183)
T ss_dssp CCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH---------------------------HHHHHHHHHH
T ss_pred CCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc---------------------------cHHHHHHHHH
Confidence 89999999887 6788999999998 9999998642211 1357888999
Q ss_pred hCCCeEEEEE
Q 018194 269 RVGFEVVKEK 278 (359)
Q Consensus 269 ~aGF~~i~~~ 278 (359)
++||.+...+
T Consensus 146 ~~g~~~~~~~ 155 (183)
T 2yxd_A 146 SRGYNVDAVN 155 (183)
T ss_dssp HTTCEEEEEE
T ss_pred HcCCeEEEEE
Confidence 9999876553
No 111
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.73 E-value=1.6e-17 Score=145.84 Aligned_cols=165 Identities=13% Similarity=0.083 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHhcCC--CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 018194 106 ATRLHEEMAVDLIDV--KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFL 182 (359)
Q Consensus 106 ~~~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 182 (359)
....+...++..+.. .++.+|||+|||+|.++..+++. ++.+|+|+|+|+.|++.|++++...++.++++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 344444545544432 25789999999999999998874 568999999999999999999998888777999999986
Q ss_pred CC---CCC---CCccceEEecccccccC---------------CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHH
Q 018194 183 KM---PFE---DNHFDGAYSIEATCHAP---------------KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH 241 (359)
Q Consensus 183 ~~---~~~---~~~fD~v~~~~~l~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 241 (359)
+. +++ +++||+|+++...++.. ....++.++.++|||||.+.+++.... ..
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~--------~~ 198 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIH--------DS 198 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHH--------HH
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHH--------HH
Confidence 62 344 26899999986554332 122467889999999999876532110 00
Q ss_pred HHHHhhhhcCCC----CCCCCCHHHHHHHHHhCCCeEEEEEecC
Q 018194 242 VDIIQGIERGDA----LPGLRSYAEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 242 ~~~~~~~~~~~~----~~~~~~~~~~~~~l~~aGF~~i~~~~~~ 281 (359)
... ...... ........++.++|+++||+.++...+.
T Consensus 199 ~~~---l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 199 LQL---KKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFC 239 (254)
T ss_dssp HHH---GGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred Hhc---ccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEEe
Confidence 111 111110 1122345789999999999998877664
No 112
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.73 E-value=2.8e-17 Score=151.24 Aligned_cols=150 Identities=13% Similarity=0.079 Sum_probs=113.1
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEec
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSI 197 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~ 197 (359)
...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++. ++++++.+|+.+ +++ .||+|++.
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CCC--CccEEEee
Confidence 3456789999999999999999985 6789999999 9999887641 359999999977 555 39999999
Q ss_pred ccccccCCHH--HHHHHHHhccCC---CCEEEEEEeeeCcccccC-chHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCC
Q 018194 198 EATCHAPKLE--DVYAEVFRVLKP---GSLYVSYEWVTTDKYEAE-NKEHVDIIQGIERGDALPGLRSYAEITEIAKRVG 271 (359)
Q Consensus 198 ~~l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 271 (359)
.++||+++.. .+|++++++||| ||++++.++......... ................ ...++.+++.++|+++|
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-g~~~t~~e~~~ll~~aG 332 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN-GKERNEEEWKKLFIEAG 332 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGT-CCCEEHHHHHHHHHHTT
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhcc-CCCCCHHHHHHHHHHCC
Confidence 9999999877 999999999999 999999987764322110 0011111111000011 24468899999999999
Q ss_pred CeEEEEEec
Q 018194 272 FEVVKEKDL 280 (359)
Q Consensus 272 F~~i~~~~~ 280 (359)
|++++....
T Consensus 333 f~~~~~~~~ 341 (352)
T 1fp2_A 333 FQHYKISPL 341 (352)
T ss_dssp CCEEEEEEE
T ss_pred CCeeEEEec
Confidence 999987664
No 113
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=2.1e-17 Score=138.38 Aligned_cols=106 Identities=14% Similarity=0.077 Sum_probs=93.0
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEecc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FEDNHFDGAYSIE 198 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~v~~~~ 198 (359)
.++.+|||+|||+|.++..++.....+|+|+|+|+.+++.+++++...++ ++++++++|+.+.+ +++++||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 46789999999999999988876556899999999999999999998887 68999999998753 4468999999998
Q ss_pred ccccc-CCHHHHHHHHHh--ccCCCCEEEEEE
Q 018194 199 ATCHA-PKLEDVYAEVFR--VLKPGSLYVSYE 227 (359)
Q Consensus 199 ~l~~~-~~~~~~l~~~~~--~LkpgG~l~~~~ 227 (359)
.+++. ++...+++++.+ +|||||.+++..
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred CCCcchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 87775 678899999999 999999999854
No 114
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.72 E-value=7.5e-17 Score=132.67 Aligned_cols=119 Identities=12% Similarity=0.066 Sum_probs=98.8
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++.+|||+|||+|.++..+++.. +|+|+|+|+.|++. ..+++++++|+.+ ++++++||+|+++..+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~ 88 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPPY 88 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCCC
Confidence 456799999999999999999864 99999999999987 2468999999988 5666899999999888
Q ss_pred cccCCH---------HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCC
Q 018194 201 CHAPKL---------EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVG 271 (359)
Q Consensus 201 ~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 271 (359)
++.++. ..+++++.+.| |||++++.+... ...+++.++++++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~---------------------------~~~~~l~~~l~~~g 140 (170)
T 3q87_B 89 VPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA---------------------------NRPKEVLARLEERG 140 (170)
T ss_dssp BTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG---------------------------GCHHHHHHHHHHTT
T ss_pred ccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC---------------------------CCHHHHHHHHHHCC
Confidence 765543 67889999999 999999865321 13468899999999
Q ss_pred CeEEEEEec
Q 018194 272 FEVVKEKDL 280 (359)
Q Consensus 272 F~~i~~~~~ 280 (359)
|+.+.....
T Consensus 141 f~~~~~~~~ 149 (170)
T 3q87_B 141 YGTRILKVR 149 (170)
T ss_dssp CEEEEEEEE
T ss_pred CcEEEEEee
Confidence 999887654
No 115
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.71 E-value=3.9e-17 Score=145.09 Aligned_cols=135 Identities=15% Similarity=0.185 Sum_probs=109.1
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCCCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKA-GLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~ 188 (359)
..++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.++++.... +. +++++.++|+.+ ++++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~~ 177 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FISD 177 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CCCS
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cCcC
Confidence 45677778889999999999999999999985 4689999999999999999998876 63 479999999988 5667
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|++ +++++..+++++.++|||||++++.+.... ...++.+.|+
T Consensus 178 ~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~---------------------------~~~~~~~~l~ 225 (275)
T 1yb2_A 178 QMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD---------------------------QSEKTVLSLS 225 (275)
T ss_dssp CCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH---------------------------HHHHHHHHSG
T ss_pred CCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH---------------------------HHHHHHHHHH
Confidence 88999998 567888999999999999999998642110 1246778888
Q ss_pred hCCCeEEEEEec
Q 018194 269 RVGFEVVKEKDL 280 (359)
Q Consensus 269 ~aGF~~i~~~~~ 280 (359)
++||..++....
T Consensus 226 ~~Gf~~~~~~~~ 237 (275)
T 1yb2_A 226 ASGMHHLETVEL 237 (275)
T ss_dssp GGTEEEEEEEEE
T ss_pred HCCCeEEEEEEE
Confidence 999999887664
No 116
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.71 E-value=1.2e-16 Score=133.78 Aligned_cols=116 Identities=22% Similarity=0.223 Sum_probs=100.2
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCCCCC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS-LCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~~ 189 (359)
.+.++..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++.. ++++..+|+.+ +++++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~ 118 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDR 118 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTS
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccC
Confidence 355666777778899999999999999999987 7899999999999999999998877653 49999999987 44567
Q ss_pred ccceEEecccccc-cCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 190 HFDGAYSIEATCH-APKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 190 ~fD~v~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+||+|++...+++ ..+...+++++.++|+|||.+++..+
T Consensus 119 ~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 119 KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 8999999988876 35678999999999999999998654
No 117
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.71 E-value=8.4e-17 Score=134.56 Aligned_cols=134 Identities=21% Similarity=0.294 Sum_probs=109.6
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED- 188 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~- 188 (359)
....++..+...++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.++++....++..++++.++|+.+ +++.
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~ 98 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKI 98 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTS
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccC
Confidence 44556666778889999999999999999999865 79999999999999999999888876689999999876 3333
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|++..+++ +...+++++.++|+|||.+++...... +..++.+.++
T Consensus 99 ~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~~---------------------------~~~~~~~~l~ 148 (192)
T 1l3i_A 99 PDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILLE---------------------------TKFEAMECLR 148 (192)
T ss_dssp CCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBHH---------------------------HHHHHHHHHH
T ss_pred CCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCcc---------------------------hHHHHHHHHH
Confidence 5899999987764 568999999999999999998643211 2357888999
Q ss_pred hCCCeEE
Q 018194 269 RVGFEVV 275 (359)
Q Consensus 269 ~aGF~~i 275 (359)
+.||.+.
T Consensus 149 ~~g~~~~ 155 (192)
T 1l3i_A 149 DLGFDVN 155 (192)
T ss_dssp HTTCCCE
T ss_pred HCCCceE
Confidence 9999443
No 118
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.71 E-value=6.6e-17 Score=141.91 Aligned_cols=137 Identities=22% Similarity=0.314 Sum_probs=115.6
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|+++++..++++++++.++|+.+. +++
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 160 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEE 160 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCC
Confidence 346777788889999999999999999999986 36899999999999999999999988877799999999864 667
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|++ +.+++..+++++.++|||||++++...... ...++.+.|+
T Consensus 161 ~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~---------------------------~~~~~~~~l~ 208 (255)
T 3mb5_A 161 ENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN---------------------------QVMRLHEKLR 208 (255)
T ss_dssp CSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH---------------------------HHHHHHHHHH
T ss_pred CCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH---------------------------HHHHHHHHHH
Confidence 88999998 457888999999999999999998532110 1357788899
Q ss_pred hCC--CeEEEEEec
Q 018194 269 RVG--FEVVKEKDL 280 (359)
Q Consensus 269 ~aG--F~~i~~~~~ 280 (359)
++| |..++....
T Consensus 209 ~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 209 EFKDYFMKPRTINV 222 (255)
T ss_dssp HTGGGBSCCEEECC
T ss_pred HcCCCccccEEEEE
Confidence 999 998887665
No 119
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.71 E-value=6.8e-17 Score=141.12 Aligned_cols=133 Identities=17% Similarity=0.136 Sum_probs=107.8
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC---CCccceEE
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE---DNHFDGAY 195 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~v~ 195 (359)
..++.+|||||||+|..+..++.. ++.+|+++|+|+.+++.++++....++. +++++++|+++++.. .++||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEE
Confidence 456889999999999999999985 6789999999999999999999998875 599999999886542 47899999
Q ss_pred ecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEE
Q 018194 196 SIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVV 275 (359)
Q Consensus 196 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i 275 (359)
++.+ .+...+++.+.++|||||++++...... . . ...++...++..||.++
T Consensus 157 s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~-------~--~----------------e~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 157 ARAV----APLCVLSELLLPFLEVGGAAVAMKGPRV-------E--E----------------ELAPLPPALERLGGRLG 207 (249)
T ss_dssp EESS----CCHHHHHHHHGGGEEEEEEEEEEECSCC-------H--H----------------HHTTHHHHHHHHTEEEE
T ss_pred ECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCc-------H--H----------------HHHHHHHHHHHcCCeEE
Confidence 9753 5788999999999999999987531100 0 0 01356677888999999
Q ss_pred EEEecCC
Q 018194 276 KEKDLAK 282 (359)
Q Consensus 276 ~~~~~~~ 282 (359)
+...+..
T Consensus 208 ~~~~~~~ 214 (249)
T 3g89_A 208 EVLALQL 214 (249)
T ss_dssp EEEEEEC
T ss_pred EEEEeeC
Confidence 8887743
No 120
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.71 E-value=1.5e-16 Score=141.36 Aligned_cols=141 Identities=16% Similarity=0.224 Sum_probs=111.9
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 018194 107 TRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP 185 (359)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 185 (359)
.+...+.++..+. .++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.++++....+++ +++++++|+.+.
T Consensus 95 te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~- 171 (276)
T 2b3t_A 95 TECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSA- 171 (276)
T ss_dssp HHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGG-
T ss_pred HHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhh-
Confidence 3445556666665 56789999999999999999964 5689999999999999999999888875 799999999873
Q ss_pred CCCCccceEEecc-------------cccccC------------CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchH
Q 018194 186 FEDNHFDGAYSIE-------------ATCHAP------------KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKE 240 (359)
Q Consensus 186 ~~~~~fD~v~~~~-------------~l~~~~------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 240 (359)
++.++||+|+++. +++|.| +...+++++.++|||||++++..
T Consensus 172 ~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~------------- 238 (276)
T 2b3t_A 172 LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH------------- 238 (276)
T ss_dssp GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC-------------
T ss_pred cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE-------------
Confidence 4467899999983 333332 35789999999999999998741
Q ss_pred HHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 241 HVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
.....+++.++++++||+.++..
T Consensus 239 ---------------~~~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 239 ---------------GWQQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp ---------------CSSCHHHHHHHHHHTTCTTCCEE
T ss_pred ---------------CchHHHHHHHHHHHCCCcEEEEE
Confidence 11245789999999999876543
No 121
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.71 E-value=1.1e-16 Score=140.77 Aligned_cols=136 Identities=20% Similarity=0.247 Sum_probs=114.0
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCCCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKA-GLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~ 188 (359)
..++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.++++.... + ..++++.++|+.+.++++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCC
Confidence 45677778889999999999999999999986 3679999999999999999998877 6 468999999999887777
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|++ +.+++..+++++.++|+|||++++...... ...++.+.|+
T Consensus 165 ~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~---------------------------~~~~~~~~l~ 212 (258)
T 2pwy_A 165 AAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT---------------------------QVLELVRAAE 212 (258)
T ss_dssp TCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH---------------------------HHHHHHHHHT
T ss_pred CCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH---------------------------HHHHHHHHHH
Confidence 89999998 357888999999999999999998642110 1246777888
Q ss_pred hCCCeEEEEEec
Q 018194 269 RVGFEVVKEKDL 280 (359)
Q Consensus 269 ~aGF~~i~~~~~ 280 (359)
++||..++..+.
T Consensus 213 ~~gf~~~~~~~~ 224 (258)
T 2pwy_A 213 AHPFRLERVLEV 224 (258)
T ss_dssp TTTEEEEEEEEE
T ss_pred HCCCceEEEEEe
Confidence 999999887664
No 122
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.71 E-value=9.6e-17 Score=146.66 Aligned_cols=116 Identities=17% Similarity=0.146 Sum_probs=100.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
.+.+.+.+.+...++.+|||||||+|.++..+++....+|+|+|+|+ |++.|+++.+..++.++++++++|+.++++++
T Consensus 51 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 51 SYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC
T ss_pred HHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCC
Confidence 34456666666778899999999999999999987445999999997 99999999999888789999999999988888
Q ss_pred CccceEEecc---cccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 189 NHFDGAYSIE---ATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 189 ~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
++||+|++.. .+.+..++..++.++.++|||||.++.
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 8999999876 455556788999999999999999873
No 123
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=6.7e-17 Score=141.58 Aligned_cols=111 Identities=27% Similarity=0.448 Sum_probs=92.5
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
..++......++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. +++++++|+.+++++ ++|
T Consensus 31 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~f 106 (252)
T 1wzn_A 31 EEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK-NEF 106 (252)
T ss_dssp HHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC-SCE
T ss_pred HHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC-CCc
Confidence 33444455567789999999999999999986 67999999999999999999887664 689999999988765 689
Q ss_pred ceEEecc-cccccC--CHHHHHHHHHhccCCCCEEEEE
Q 018194 192 DGAYSIE-ATCHAP--KLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 192 D~v~~~~-~l~~~~--~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
|+|++.. .+++.+ +...+++++.++|||||.+++.
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 9999874 344443 5789999999999999999874
No 124
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.70 E-value=1.3e-16 Score=136.13 Aligned_cols=128 Identities=14% Similarity=0.105 Sum_probs=102.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEecc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FEDNHFDGAYSIE 198 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~v~~~~ 198 (359)
++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...++ .|++++++|+.+++ +++++||.|++.+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 5679999999999999999985 678999999999999999999988876 47999999998865 6778999998876
Q ss_pred cccccCC--------HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 199 ATCHAPK--------LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 199 ~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
...+... ...+++++.++|||||.+++... .... ...+.+.++++
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td---------~~~~------------------~~~~~~~~~~~ 169 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD---------NRGL------------------FEYSLKSFSEY 169 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES---------CHHH------------------HHHHHHHHHHH
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC---------CHHH------------------HHHHHHHHHHC
Confidence 5433221 36899999999999999998420 0000 13556778888
Q ss_pred CCeEEEE
Q 018194 271 GFEVVKE 277 (359)
Q Consensus 271 GF~~i~~ 277 (359)
||.....
T Consensus 170 g~~~~~~ 176 (213)
T 2fca_A 170 GLLLTYV 176 (213)
T ss_dssp TCEEEEE
T ss_pred CCccccc
Confidence 9987764
No 125
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.70 E-value=3.5e-17 Score=140.78 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=99.7
Q ss_pred CCCCEEEEECCCCChHHHHHHh-hcCCEEEEEeCC-HHHHHHH---HHHHHHcCCCCCeEEEEcCCCCCCCC-CCccceE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAA-HSRANVVGITIN-EYQVNRA---RLHNKKAGLDSLCEVVCGNFLKMPFE-DNHFDGA 194 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s-~~~~~~a---~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~v 194 (359)
.++.+|||||||+|.++..+++ .++.+|+|+|+| +.|++.| +++....+++ ++.+.++|+.++|.. .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 4678999999999999999986 467899999999 7777776 7777776764 799999999988521 1345555
Q ss_pred Eecccccc-----cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 195 YSIEATCH-----APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 195 ~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
++++...+ ..+...++++++++|||||++++....... +... ........ ...+.+...+++.+++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~~----~~~~~~~~--~~~~~~~~~~el~~~l~~ 174 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDS-YEEA----EIKKRGLP--LLSKAYFLSEQYKAELSN 174 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC---------------------CCHHHHHSHHHHHHHHH
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEecccc-chhc----hhhhcCCC--CCChhhcchHHHHHHHHH
Confidence 54432211 123467899999999999999984322111 1100 00000000 000001111248999999
Q ss_pred CCCeEEEEEecC
Q 018194 270 VGFEVVKEKDLA 281 (359)
Q Consensus 270 aGF~~i~~~~~~ 281 (359)
+||+++..+.+.
T Consensus 175 aGf~v~~~~~~~ 186 (225)
T 3p2e_A 175 SGFRIDDVKELD 186 (225)
T ss_dssp HTCEEEEEEEEC
T ss_pred cCCCeeeeeecC
Confidence 999999988774
No 126
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.70 E-value=1.4e-16 Score=135.62 Aligned_cols=111 Identities=18% Similarity=0.170 Sum_probs=98.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
.....+...+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....+++ ++++..+|+.+...+.
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccC
Confidence 34556677788889999999999999999999987 689999999999999999999988875 7999999998866567
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++||+|++..+++|+++ ++.++|||||++++..
T Consensus 142 ~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp CCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEE
T ss_pred CCccEEEEccchhhhhH------HHHHhcccCcEEEEEE
Confidence 89999999999999885 6899999999999854
No 127
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.70 E-value=4.7e-16 Score=152.07 Aligned_cols=117 Identities=17% Similarity=0.284 Sum_probs=98.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcC--CEEEEEeCCHHHHHHHHHHHHHc------CCCCCeEEEEcC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSR--ANVVGITINEYQVNRARLHNKKA------GLDSLCEVVCGN 180 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~~------~~~~~i~~~~~d 180 (359)
...+.+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|+++.... ++ .+++++++|
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESC
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECc
Confidence 3444555555555789999999999999999998642 79999999999999999876542 33 479999999
Q ss_pred CCCCCCCCCccceEEecccccccCCHH--HHHHHHHhccCCCCEEEEEE
Q 018194 181 FLKMPFEDNHFDGAYSIEATCHAPKLE--DVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 181 ~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~ 227 (359)
+.++++++++||+|++..+++|+++.. .+++++.++|||| .+++..
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 999998889999999999999998755 6999999999999 776654
No 128
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.70 E-value=2.5e-16 Score=133.69 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=87.4
Q ss_pred CCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
++.+|||+|||+|.++..++.. ++.+|+++|+|+.+++.++++....++. ++++.++|+.+.+ +.++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-~~~~~D~i~~~~-- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-SEPPFDGVISRA-- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-CCSCEEEEECSC--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-ccCCcCEEEEec--
Confidence 4789999999999999999985 5689999999999999999999888775 4999999998865 457899999864
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+.++..+++++.++|+|||++++.
T Consensus 141 --~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 141 --FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp --SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred --cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 357889999999999999999985
No 129
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.69 E-value=1e-16 Score=147.00 Aligned_cols=113 Identities=19% Similarity=0.150 Sum_probs=96.8
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
+.+.....+.++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++....++.++++++++|+.++++++++|
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 134 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKV 134 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCE
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCce
Confidence 33444334457889999999999999999997445999999994 99999999999998888999999999998888999
Q ss_pred ceEEecccc---cccCCHHHHHHHHHhccCCCCEEEE
Q 018194 192 DGAYSIEAT---CHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 192 D~v~~~~~l---~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
|+|++..+. .+.+++..+++++.++|||||+++.
T Consensus 135 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 135 DIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 999997653 3446899999999999999999874
No 130
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.69 E-value=1.8e-16 Score=146.83 Aligned_cols=118 Identities=20% Similarity=0.167 Sum_probs=101.3
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
..+.+.+.......++.+|||||||+|.++..+++....+|+|+|+| .|++.|+++....++.++++++++|+.+++++
T Consensus 49 ~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 127 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP 127 (376)
T ss_dssp HHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS
T ss_pred HHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC
Confidence 44456666667778899999999999999999998743499999999 99999999999999888899999999998876
Q ss_pred CCccceEEeccccccc---CCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHA---PKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++||+|++..+.+++ .++..+++++.++|||||.+++.+
T Consensus 128 -~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 128 -EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp -SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred -CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 899999996655544 468899999999999999998754
No 131
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.69 E-value=9.9e-17 Score=136.76 Aligned_cols=113 Identities=20% Similarity=0.234 Sum_probs=94.9
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
.+.+...+ .++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++... ..++++.++|+.++++++++
T Consensus 33 ~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~~ 107 (215)
T 2pxx_A 33 RALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSAS 107 (215)
T ss_dssp HHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSSC
T ss_pred HHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCCc
Confidence 34444443 57789999999999999999986334999999999999999988753 24799999999998888889
Q ss_pred cceEEecccccccC---------------CHHHHHHHHHhccCCCCEEEEEEe
Q 018194 191 FDGAYSIEATCHAP---------------KLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 191 fD~v~~~~~l~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
||+|++..+++++. +...+++++.++|||||++++.++
T Consensus 108 fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 108 FDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 99999988886654 568999999999999999998754
No 132
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.69 E-value=3.7e-16 Score=138.86 Aligned_cols=131 Identities=16% Similarity=0.185 Sum_probs=108.0
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 199 (359)
..++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.++++++++|+.+.+. .++||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 3568899999999999999999864347999999999999999999998888779999999998765 679999998543
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEE
Q 018194 200 TCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVK 276 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~ 276 (359)
.+...++.++.++|||||++++.++...... .....+.+.+.++++||++..
T Consensus 202 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---------------------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM---------------------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT---------------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc---------------------cccHHHHHHHHHHHcCCeeEE
Confidence 3557889999999999999999776542111 112346888999999999876
No 133
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.68 E-value=3.6e-16 Score=137.09 Aligned_cols=136 Identities=18% Similarity=0.207 Sum_probs=109.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.+... +.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++. +++.++|+.+. +++
T Consensus 109 ~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~~~ 182 (254)
T 2nxc_A 109 LALKALARH--LRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-LPF 182 (254)
T ss_dssp HHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-GGG
T ss_pred HHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-CcC
Confidence 333444443 457889999999999999998885 459999999999999999999887765 89999998762 456
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
++||+|+++...++ ...++.++.++|||||++++...... +.+++.+.++
T Consensus 183 ~~fD~Vv~n~~~~~---~~~~l~~~~~~LkpgG~lils~~~~~---------------------------~~~~v~~~l~ 232 (254)
T 2nxc_A 183 GPFDLLVANLYAEL---HAALAPRYREALVPGGRALLTGILKD---------------------------RAPLVREAMA 232 (254)
T ss_dssp CCEEEEEEECCHHH---HHHHHHHHHHHEEEEEEEEEEEEEGG---------------------------GHHHHHHHHH
T ss_pred CCCCEEEECCcHHH---HHHHHHHHHHHcCCCCEEEEEeeccC---------------------------CHHHHHHHHH
Confidence 78999999765433 57899999999999999998654321 2468899999
Q ss_pred hCCCeEEEEEec
Q 018194 269 RVGFEVVKEKDL 280 (359)
Q Consensus 269 ~aGF~~i~~~~~ 280 (359)
++||++++....
T Consensus 233 ~~Gf~~~~~~~~ 244 (254)
T 2nxc_A 233 GAGFRPLEEAAE 244 (254)
T ss_dssp HTTCEEEEEEEE
T ss_pred HCCCEEEEEecc
Confidence 999999887664
No 134
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.68 E-value=9.7e-17 Score=137.32 Aligned_cols=104 Identities=17% Similarity=0.240 Sum_probs=88.2
Q ss_pred CCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C--CCCCccceEEec
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P--FEDNHFDGAYSI 197 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~fD~v~~~ 197 (359)
++.+|||||||+|.++..+++. ++..|+|+|+|+.+++.|++++...++. |++++++|+.++ + +++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 5679999999999999999974 6689999999999999999999888865 699999999874 3 678999999998
Q ss_pred ccccccCCH--------HHHHHHHHhccCCCCEEEEE
Q 018194 198 EATCHAPKL--------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 198 ~~l~~~~~~--------~~~l~~~~~~LkpgG~l~~~ 226 (359)
+...+.... ..+++++.++|||||.+++.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 654433221 26999999999999999885
No 135
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.68 E-value=3.7e-16 Score=138.88 Aligned_cols=136 Identities=21% Similarity=0.255 Sum_probs=113.1
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
..++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|+++....++.+++++..+|+.+. ++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 180 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK 180 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence 45677778889999999999999999999986 36799999999999999999998888766899999999876 5667
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
+||+|++. .+++..+++++.++|+|||++++...... ...++.+.|++
T Consensus 181 ~~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~---------------------------~~~~~~~~l~~ 228 (277)
T 1o54_A 181 DVDALFLD-----VPDPWNYIDKCWEALKGGGRFATVCPTTN---------------------------QVQETLKKLQE 228 (277)
T ss_dssp SEEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEESSHH---------------------------HHHHHHHHHHH
T ss_pred ccCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCCHH---------------------------HHHHHHHHHHH
Confidence 89999983 47788999999999999999998642110 12466778889
Q ss_pred CCCeEEEEEec
Q 018194 270 VGFEVVKEKDL 280 (359)
Q Consensus 270 aGF~~i~~~~~ 280 (359)
+||..++....
T Consensus 229 ~gf~~~~~~~~ 239 (277)
T 1o54_A 229 LPFIRIEVWES 239 (277)
T ss_dssp SSEEEEEEECC
T ss_pred CCCceeEEEEE
Confidence 99998876554
No 136
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.68 E-value=3.3e-16 Score=135.58 Aligned_cols=142 Identities=15% Similarity=0.108 Sum_probs=103.3
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC---CCCCCCc
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK---MPFEDNH 190 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~---~~~~~~~ 190 (359)
..+.+.++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.+.+.+... .+++++++|+.+ +++.+++
T Consensus 71 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 71 DQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp SCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCC
T ss_pred heecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCc
Confidence 3456778999999999999999999986 3479999999999988887777654 579999999987 3445679
Q ss_pred cceEEecccccccCC-HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 191 FDGAYSIEATCHAPK-LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 191 fD~v~~~~~l~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
||+|++... .++ ...++.++.++|||||++++............ . ... + ..+ .++|++
T Consensus 148 ~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~-~--~~~-------------~-~~~-~~~l~~ 206 (233)
T 2ipx_A 148 VDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTAS-A--EAV-------------F-ASE-VKKMQQ 206 (233)
T ss_dssp EEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSC-H--HHH-------------H-HHH-HHTTGG
T ss_pred EEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCC-H--HHH-------------H-HHH-HHHHHH
Confidence 999999654 233 35568899999999999998422111000000 0 000 0 123 588899
Q ss_pred CCCeEEEEEecC
Q 018194 270 VGFEVVKEKDLA 281 (359)
Q Consensus 270 aGF~~i~~~~~~ 281 (359)
+||++++...+.
T Consensus 207 ~Gf~~~~~~~~~ 218 (233)
T 2ipx_A 207 ENMKPQEQLTLE 218 (233)
T ss_dssp GTEEEEEEEECT
T ss_pred CCCceEEEEecC
Confidence 999999877663
No 137
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.68 E-value=1.8e-16 Score=146.19 Aligned_cols=147 Identities=13% Similarity=0.089 Sum_probs=112.0
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++ . .+++++.+|+.+ +++ .||+|++..
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKW 259 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEcc
Confidence 446689999999999999999985 6789999999 788877653 1 359999999987 665 499999999
Q ss_pred cccccCCHH--HHHHHHHhccCC---CCEEEEEEeeeCccccc----CchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 199 ATCHAPKLE--DVYAEVFRVLKP---GSLYVSYEWVTTDKYEA----ENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 199 ~l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
++||+++.. .+|++++++||| ||++++.++........ .......+......+ ...++.+++.++|++
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---g~~~t~~e~~~ll~~ 336 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL---GKERTKQEWEKLIYD 336 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHS---CCCEEHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCC---CCCCCHHHHHHHHHH
Confidence 999999866 999999999999 99999998776432211 001111111111111 135689999999999
Q ss_pred CCCeEEEEEec
Q 018194 270 VGFEVVKEKDL 280 (359)
Q Consensus 270 aGF~~i~~~~~ 280 (359)
+||++++....
T Consensus 337 aGf~~~~~~~~ 347 (358)
T 1zg3_A 337 AGFSSYKITPI 347 (358)
T ss_dssp TTCCEEEEEEE
T ss_pred cCCCeeEEEec
Confidence 99999988764
No 138
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.67 E-value=8.3e-17 Score=133.15 Aligned_cols=124 Identities=18% Similarity=0.147 Sum_probs=99.0
Q ss_pred hcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC---CCCccce
Q 018194 117 LIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF---EDNHFDG 193 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~fD~ 193 (359)
.+++.+|.+|||||||. +++|+|+.|++.|+++.. .++++.++|+.++++ ++++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeE
Confidence 34678899999999996 238999999999998853 248999999998876 7889999
Q ss_pred EEeccccccc-CCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCC
Q 018194 194 AYSIEATCHA-PKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGF 272 (359)
Q Consensus 194 v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 272 (359)
|++..+++|+ +++..++++++++|||||++++.+....... . ....++.+++.++|+++||
T Consensus 67 V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 67 ILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD-----------------N-NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC-----------------S-SSSSCCHHHHHHHHHHTTC
T ss_pred EEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc-----------------c-ccccCCHHHHHHHHHHCCC
Confidence 9999999999 8999999999999999999999543221100 0 1123467899999999999
Q ss_pred eEEEEEec
Q 018194 273 EVVKEKDL 280 (359)
Q Consensus 273 ~~i~~~~~ 280 (359)
+. ....
T Consensus 129 -i~-~~~~ 134 (176)
T 2ld4_A 129 -VE-VKEL 134 (176)
T ss_dssp -EE-EEEE
T ss_pred -cE-eecC
Confidence 44 4443
No 139
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.67 E-value=1.7e-17 Score=141.52 Aligned_cols=143 Identities=18% Similarity=0.160 Sum_probs=92.6
Q ss_pred HHHHHHHHHHhcCC-CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 018194 107 TRLHEEMAVDLIDV-KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM 184 (359)
Q Consensus 107 ~~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 184 (359)
.+.+.+.+++.+.. .++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.++++....+. +++++++|+.+
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~- 90 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIE- 90 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHh-
Confidence 34455666666654 67889999999999999999985 356999999999999999999887765 68999999987
Q ss_pred CCCC-----CccceEEecccccccCC--------------------------HHHHHHHHHhccCCCCEEEEEEeeeCcc
Q 018194 185 PFED-----NHFDGAYSIEATCHAPK--------------------------LEDVYAEVFRVLKPGSLYVSYEWVTTDK 233 (359)
Q Consensus 185 ~~~~-----~~fD~v~~~~~l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 233 (359)
++++ ++||+|+++..+++..+ ...+++++.++|||||++++.+..
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---- 166 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG---- 166 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT----
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC----
Confidence 5554 89999999755433221 178889999999999995543321
Q ss_pred cccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH--hCCCeEEEEEe
Q 018194 234 YEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK--RVGFEVVKEKD 279 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aGF~~i~~~~ 279 (359)
....+.+.++++ ++||..++...
T Consensus 167 -----------------------~~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 167 -----------------------HNQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp -----------------------TSCHHHHHHHTGGGGGGTEECCEEE
T ss_pred -----------------------CccHHHHHHHHHHhhcCCceEEEEE
Confidence 113467888899 99998876544
No 140
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.67 E-value=7.4e-16 Score=141.32 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=99.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
..+.+.+.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++.+..++.++++++.+|+.+++++ +
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~ 115 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-E 115 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-S
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-C
Confidence 4455667777778899999999999999999987556999999996 8899999999888878999999999998765 6
Q ss_pred ccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEE
Q 018194 190 HFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+||+|++..+++|+. +....+.+++++|||||.+++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 899999998888774 4678889999999999999854
No 141
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.67 E-value=1.3e-15 Score=129.64 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=81.9
Q ss_pred cCCCCCCEEEEECCCCChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC----CCCCCccc
Q 018194 118 IDVKAGDRILDVGCGVGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM----PFEDNHFD 192 (359)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~fD 192 (359)
+.+.++.+|||+|||+|..+..+++.. +.+|+|+|+|+.|++.+.+.+... .++.++.+|+... +++ ++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-ccee
Confidence 456789999999999999999999853 469999999999887776665543 3789999998773 444 7899
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+|++.. ..+ .+...++++++++|||||++++.
T Consensus 129 ~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 129 LIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEECC-CST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEE
Confidence 999973 221 23445699999999999999986
No 142
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.67 E-value=3.5e-16 Score=136.59 Aligned_cols=108 Identities=10% Similarity=0.058 Sum_probs=87.9
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF---- 186 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---- 186 (359)
.+.++..+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++.... ++..++.+.+.
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPK 105 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCG
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc-------cceeeeeeccccccc
Confidence 455677788889999999999999999999986 679999999999999999986543 22333333222
Q ss_pred -CCCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 -EDNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 -~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+++||+|++..+++|+. +...+++++.++| |||++++..
T Consensus 106 ~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 106 ELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp GGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred ccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 257899999999999985 5678999999999 999999864
No 143
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.67 E-value=8.7e-17 Score=133.09 Aligned_cols=119 Identities=12% Similarity=0.073 Sum_probs=95.0
Q ss_pred HHHHHHHHHhcC-CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC
Q 018194 108 RLHEEMAVDLID-VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MP 185 (359)
Q Consensus 108 ~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~ 185 (359)
....+.+...+. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.+++++...++.++++++.+|+.+ ++
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID 95 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH
Confidence 334455555555 5678899999999999999999875569999999999999999999888877789999999977 33
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHH--hccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVF--RVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~ 227 (359)
...++||+|++...++ ..+....++.+. ++|||||.+++..
T Consensus 96 ~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 96 CLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp HBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred hhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 3346799999986643 235667777777 9999999999864
No 144
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.66 E-value=1.2e-16 Score=135.10 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=88.4
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCCC--CCCCc-cceEEec
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLD-SLCEVVCGNFLKMP--FEDNH-FDGAYSI 197 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~-fD~v~~~ 197 (359)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...++. ++++++++|+.+.. +++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 57899999999999999877654469999999999999999999988874 58999999987743 23578 9999998
Q ss_pred ccccccCCHHHHHHHH--HhccCCCCEEEEEE
Q 018194 198 EATCHAPKLEDVYAEV--FRVLKPGSLYVSYE 227 (359)
Q Consensus 198 ~~l~~~~~~~~~l~~~--~~~LkpgG~l~~~~ 227 (359)
..++ ..+...+++.+ .++|||||.+++..
T Consensus 133 ~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 133 PPFH-FNLAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp CCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCC-CccHHHHHHHHHhcCccCCCcEEEEEE
Confidence 7743 56788899999 67899999998854
No 145
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.66 E-value=4.9e-16 Score=141.34 Aligned_cols=115 Identities=18% Similarity=0.194 Sum_probs=96.6
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
..+.+.+.+...++.+|||||||+|.++..+++....+|+|+|+| .+++.|+++....++.++++++++|+.+++++++
T Consensus 26 y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 104 (328)
T 1g6q_1 26 YRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFP 104 (328)
T ss_dssp HHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSS
T ss_pred HHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCC
Confidence 334444444555788999999999999999998644599999999 5999999999998888889999999999888778
Q ss_pred ccceEEeccc---ccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 190 HFDGAYSIEA---TCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 190 ~fD~v~~~~~---l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
+||+|++..+ +.+..++..++.++.++|||||.++.
T Consensus 105 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999999754 33445688999999999999999974
No 146
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.66 E-value=8.5e-17 Score=131.39 Aligned_cols=109 Identities=12% Similarity=0.073 Sum_probs=92.1
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccc
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFD 192 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 192 (359)
+...+ .+..+|||+|||+|.++..++. .++++|+++|+|+.|++.+++++...|...++++ .|.... .+.++||
T Consensus 43 ~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~D 117 (200)
T 3fzg_A 43 VFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYD 117 (200)
T ss_dssp HHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEE
T ss_pred HHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcC
Confidence 44444 4577999999999999999977 4678999999999999999999999887666666 666543 4568899
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|++..++|++++.+..+.++.+.|||||.++-.+
T Consensus 118 vVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 118 VVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 99999999999878888889999999999998754
No 147
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.66 E-value=1.9e-15 Score=134.48 Aligned_cols=152 Identities=11% Similarity=0.017 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeC-CHHHHHHHHHHH-----HHcCCC----CCeEE
Q 018194 107 TRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITI-NEYQVNRARLHN-----KKAGLD----SLCEV 176 (359)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~-s~~~~~~a~~~~-----~~~~~~----~~i~~ 176 (359)
...+.+.+.......++.+|||+|||+|.++..+++....+|+++|+ |+.+++.+++++ ...++. +++++
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 34555666666555678899999999999999988863349999999 899999999998 555543 47888
Q ss_pred EEcCCCCCC--C----CCCccceEEecccccccCCHHHHHHHHHhccC---C--CCEEEEEEeeeCcccccCchHHHHHH
Q 018194 177 VCGNFLKMP--F----EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLK---P--GSLYVSYEWVTTDKYEAENKEHVDII 245 (359)
Q Consensus 177 ~~~d~~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk---p--gG~l~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
...|..+.. + ++++||+|++..+++|.++...+++.+.++|+ | ||.+++.-.... ...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~-------~~~---- 212 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR-------PHL---- 212 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC----------------
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee-------ccc----
Confidence 877765531 2 35789999999999999999999999999999 9 998776321110 000
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHhCC-CeEEEEEec
Q 018194 246 QGIERGDALPGLRSYAEITEIAKRVG-FEVVKEKDL 280 (359)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~aG-F~~i~~~~~ 280 (359)
.....++.+.++++| |++......
T Consensus 213 -----------~~~~~~~~~~l~~~G~f~v~~~~~~ 237 (281)
T 3bzb_A 213 -----------AERDLAFFRLVNADGALIAEPWLSP 237 (281)
T ss_dssp --------------CTHHHHHHHHSTTEEEEEEECC
T ss_pred -----------chhHHHHHHHHHhcCCEEEEEeccc
Confidence 001236677899999 999877543
No 148
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.65 E-value=8.5e-16 Score=136.72 Aligned_cols=112 Identities=20% Similarity=0.251 Sum_probs=97.7
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHc-C-CCCCeEEEEcCCCCCCC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKA-G-LDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~-~-~~~~i~~~~~d~~~~~~ 186 (359)
...++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|+++.... + +..++++.++|+.+.++
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 355677778889999999999999999999985 4679999999999999999998876 4 45689999999998877
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++++||+|++ +.+++..+++++.++|+|||++++..
T Consensus 168 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 168 PDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp CTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 7789999998 45678899999999999999999864
No 149
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.65 E-value=1.2e-15 Score=129.99 Aligned_cols=127 Identities=17% Similarity=0.080 Sum_probs=105.8
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 199 (359)
+++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++++..++.+++++..+|..+...+.+.||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 46789999999999999999986 34589999999999999999999999988999999999886544447999887554
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 200 TCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
.. .-...++.+..+.|+++|+|++.- ....+.++++|.+.||.+++..
T Consensus 100 Gg--~lI~~IL~~~~~~l~~~~~lIlqp-----------------------------~~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 100 GG--RLIADILNNDIDKLQHVKTLVLQP-----------------------------NNREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEE-----------------------------SSCHHHHHHHHHHTTEEEEEEE
T ss_pred ch--HHHHHHHHHHHHHhCcCCEEEEEC-----------------------------CCChHHHHHHHHHCCCEEEEEE
Confidence 33 236788899999999999999841 1134689999999999998866
No 150
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.65 E-value=3.5e-16 Score=142.94 Aligned_cols=161 Identities=13% Similarity=0.111 Sum_probs=92.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcC----------CCCCeEEEE
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAG----------LDSLCEVVC 178 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~----------~~~~i~~~~ 178 (359)
...++..+.+.++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|+++....+ ...++++..
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 3455666778899999999999999999999853 3799999999999999999987632 335899999
Q ss_pred cCCCCC--CCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhh-h-------
Q 018194 179 GNFLKM--PFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQG-I------- 248 (359)
Q Consensus 179 ~d~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-~------- 248 (359)
+|+.+. ++++++||+|++.. +++..++.++.++|||||++++....... .......+... .
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~~----~~~~~~~l~~~~~~~~~~~~ 244 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVNITQ----VIELLDGIRTCELALSCEKI 244 (336)
T ss_dssp SCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESSHHH----HHHHHHHHHHHTCCEEEEEE
T ss_pred CChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCCHHH----HHHHHHHHHhcCCCcccceE
Confidence 999886 45667899999843 45556899999999999999986532211 00011111110 0
Q ss_pred hc-C-CCCCC---CCCHHHHHHHHHhCCCeEEEEEec
Q 018194 249 ER-G-DALPG---LRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 249 ~~-~-~~~~~---~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
.. . ..+.. .....++.+.|+++||++++....
T Consensus 245 ~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~ 281 (336)
T 2b25_A 245 SEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQ 281 (336)
T ss_dssp ECCCCCCEEECC-------------------------
T ss_pred EEecccceEEEeecccccchhhhhccccccccccccc
Confidence 00 0 00000 011127889999999999987665
No 151
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.65 E-value=1.1e-15 Score=142.35 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=97.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcC-CEEEEEeCCHHHHHHH-------HHHHHHcCCC-CCeEEEEc
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSR-ANVVGITINEYQVNRA-------RLHNKKAGLD-SLCEVVCG 179 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a-------~~~~~~~~~~-~~i~~~~~ 179 (359)
.....+++.+.+.++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.| ++++...|+. .+++++++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 3455667777888999999999999999999998544 5899999999999988 8888887753 68999998
Q ss_pred CCCCC--CC--CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeee
Q 018194 180 NFLKM--PF--EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 180 d~~~~--~~--~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
|.... ++ ..++||+|+++..+ +.+++..+|+++.++|||||++++.+...
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred CccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 65432 12 24789999987666 45788899999999999999999875433
No 152
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.65 E-value=6.1e-15 Score=126.42 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=98.1
Q ss_pred cCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccc
Q 018194 118 IDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---FEDNHFD 192 (359)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD 192 (359)
+.+.+|.+|||+|||+|.++..+++. +..+|+++|+|+.|++...+.+... .|+.++.+|+.... ...++||
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceE
Confidence 34889999999999999999999985 3569999999999986655544432 47999999997642 1246899
Q ss_pred eEEecccccccCCHHHHH-HHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCC
Q 018194 193 GAYSIEATCHAPKLEDVY-AEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVG 271 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 271 (359)
+|++..+. ++....+ ..+.+.|||||++++....... +. ....-....+..+.|+++|
T Consensus 149 ~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~--d~----------------t~~~~e~~~~~~~~L~~~g 207 (232)
T 3id6_C 149 VLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSI--DV----------------TKDPKEIYKTEVEKLENSN 207 (232)
T ss_dssp EEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------------------------CCSSSSTTHHHHHHHHTT
T ss_pred EEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCc--cc----------------CCCHHHHHHHHHHHHHHCC
Confidence 99998653 5655555 5566699999999986311110 00 0000011135667888999
Q ss_pred CeEEEEEec
Q 018194 272 FEVVKEKDL 280 (359)
Q Consensus 272 F~~i~~~~~ 280 (359)
|++++..++
T Consensus 208 f~~~~~~~l 216 (232)
T 3id6_C 208 FETIQIINL 216 (232)
T ss_dssp EEEEEEEEC
T ss_pred CEEEEEecc
Confidence 999998876
No 153
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.65 E-value=3.5e-16 Score=134.32 Aligned_cols=107 Identities=14% Similarity=0.143 Sum_probs=91.0
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC-CC----CCcc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MP-FE----DNHF 191 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~-~~----~~~f 191 (359)
..++.+|||||||+|..+..+++. .+++|+++|+|+.+++.|++++...++.++++++++|+.+ ++ ++ .++|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 346789999999999999999984 3689999999999999999999999887789999999855 22 22 2689
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+|++....++..+...++..+ ++|||||++++.+
T Consensus 136 D~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred EEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeC
Confidence 9999988877776677788888 9999999998843
No 154
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.64 E-value=5e-16 Score=129.49 Aligned_cols=117 Identities=15% Similarity=0.057 Sum_probs=94.3
Q ss_pred HHHHHHHhc-CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---
Q 018194 110 HEEMAVDLI-DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--- 185 (359)
Q Consensus 110 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--- 185 (359)
..+.+...+ ...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....++.++++++++|+.+..
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 110 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQF 110 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHH
Confidence 334444444 3457889999999999999988886557999999999999999999988887678999999997732
Q ss_pred -CCCCccceEEecccccccCCHHHHHHHH--HhccCCCCEEEEEE
Q 018194 186 -FEDNHFDGAYSIEATCHAPKLEDVYAEV--FRVLKPGSLYVSYE 227 (359)
Q Consensus 186 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~--~~~LkpgG~l~~~~ 227 (359)
.++++||+|++...++ ..+....++.+ .++|+|||.+++..
T Consensus 111 ~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp HHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred HhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 2267899999987743 45677888888 89999999998853
No 155
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.64 E-value=2e-17 Score=143.94 Aligned_cols=142 Identities=20% Similarity=0.241 Sum_probs=111.2
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATC 201 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 201 (359)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++..+++++++|+.+++ ++++||+|++...++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 6889999999999999999986 58999999999999999999998887668999999998876 567999999999999
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 202 HAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 202 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
+..+....+.++.++|+|||.+++... ....... ....+...+.+++..++...|...++....
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~~-------------~~~~~~~--~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~ 219 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRLS-------------KKITNNI--VYFLPRNADIDQVASLAGPGGQVEIEQNFL 219 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHHH-------------HHHCSCE--EEEEETTBCHHHHHHTTCTTCCEEEEEEEE
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHHH-------------HhhCCce--EEECCCCCCHHHHHHHhccCCCEEEEehhh
Confidence 988777788899999999999654210 0000000 001234446778888888888776655443
No 156
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.64 E-value=7.6e-16 Score=132.04 Aligned_cols=120 Identities=11% Similarity=0.104 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCC
Q 018194 105 DATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLD-SLCEVVCGNF 181 (359)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~ 181 (359)
.........+....+..++.+|||||||+|..+..+++. ++++|+++|+|+.+++.|++++...++. ++++++++|+
T Consensus 39 ~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda 118 (221)
T 3dr5_A 39 EMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRP 118 (221)
T ss_dssp HHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH
T ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH
Confidence 334455566666666555669999999999999999985 3689999999999999999999999987 7899999998
Q ss_pred CCCC--CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 182 LKMP--FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 182 ~~~~--~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+.. +++++||+|++... ..+...+++++.++|||||++++.+
T Consensus 119 ~~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 119 LDVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp HHHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred HHHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 7642 33689999998653 3467789999999999999999844
No 157
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.64 E-value=2.2e-15 Score=128.18 Aligned_cols=126 Identities=16% Similarity=0.112 Sum_probs=103.5
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC-ccceEEecc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN-HFDGAYSIE 198 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~fD~v~~~~ 198 (359)
+++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++++..++.+++++..+|..+ +++.+ .||+|+...
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcC
Confidence 46789999999999999999985 3468999999999999999999999998889999999965 22333 699988765
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
+-. .-...++.+..+.|+|+|++++.-. ...+.++++|.+.||.+++..
T Consensus 93 ~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~-----------------------------~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 93 MGG--RLIARILEEGLGKLANVERLILQPN-----------------------------NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp ECH--HHHHHHHHHTGGGCTTCCEEEEEES-----------------------------SCHHHHHHHHHHTTEEEEEEE
T ss_pred CCh--HHHHHHHHHHHHHhCCCCEEEEECC-----------------------------CCHHHHHHHHHHCCCEEEEEE
Confidence 432 1267889999999999999988311 134688999999999998865
No 158
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.64 E-value=5.2e-16 Score=131.33 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=87.6
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCCCCccceEEecccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~l 200 (359)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++ .+++++++|+.+ ++...++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 5789999999999999987775335999999999999999999988887 589999999877 45556789999998763
Q ss_pred cccCCHHHHHHHHHh--ccCCCCEEEEEE
Q 018194 201 CHAPKLEDVYAEVFR--VLKPGSLYVSYE 227 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~--~LkpgG~l~~~~ 227 (359)
+..+...+++.+.+ +|+|||.+++..
T Consensus 133 -~~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 133 -RRGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp -STTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred -CCCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 35677888888866 599999998754
No 159
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.64 E-value=4.8e-15 Score=129.34 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=96.5
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
..+...+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....++..++++..+|+.+..+++++|
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 159 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIF 159 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCB
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcc
Confidence 45667778889999999999999999999987 78999999999999999999988887678999999998854356789
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+|++ +.+++..+++++.++|+|||++++..
T Consensus 160 D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 160 HAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp SEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred cEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99997 34678899999999999999999854
No 160
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.64 E-value=6.8e-16 Score=133.53 Aligned_cols=111 Identities=19% Similarity=0.247 Sum_probs=93.2
Q ss_pred HHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CCCCcc
Q 018194 115 VDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P-FEDNHF 191 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~~~f 191 (359)
...+...++.+|||||||+|..+..+++. ++.+|+++|+|+.+++.|++++...++.++++++.+|+.+. + ..+++|
T Consensus 64 ~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~f 143 (232)
T 3ntv_A 64 KQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVY 143 (232)
T ss_dssp HHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCE
T ss_pred HHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCc
Confidence 33333456789999999999999999984 46899999999999999999999998888999999999774 2 236899
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
|+|++... ..+...+++++.++|||||++++.+.
T Consensus 144 D~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 144 DMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp EEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred cEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 99997653 45678899999999999999988543
No 161
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.63 E-value=2.3e-15 Score=139.07 Aligned_cols=120 Identities=18% Similarity=0.185 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHhcC--CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 018194 105 DATRLHEEMAVDLID--VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFL 182 (359)
Q Consensus 105 ~~~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 182 (359)
...+.+.+.+...+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...++. ++++++|+.
T Consensus 214 ~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~ 290 (381)
T 3dmg_A 214 PASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALK--AQALHSDVD 290 (381)
T ss_dssp HHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTT
T ss_pred HHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchh
Confidence 444555555655542 346789999999999999999986 679999999999999999999887754 899999999
Q ss_pred CCCCCCCccceEEecccccc-----cCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 183 KMPFEDNHFDGAYSIEATCH-----APKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 183 ~~~~~~~~fD~v~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+.+.++++||+|+++..+++ ..+...+++++.++|||||.++++.
T Consensus 291 ~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 291 EALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 87766689999999988887 4467899999999999999999863
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=2.6e-15 Score=128.20 Aligned_cols=111 Identities=24% Similarity=0.253 Sum_probs=94.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSR--ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
....+.+.+.+.++.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.++++....+++ ++++..+|+......
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCGG
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCCC
Confidence 345666777888899999999999999999998643 79999999999999999998887764 599999998653223
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.++||+|++..+++|++ +++.++|||||++++..
T Consensus 144 ~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp GCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred CCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEE
Confidence 57899999999999987 48899999999999864
No 163
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.63 E-value=2.3e-15 Score=129.31 Aligned_cols=128 Identities=13% Similarity=0.081 Sum_probs=104.6
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
++++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++++..++.+++++..+|..+...+..+||+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 346789999999999999999985 3458999999999999999999999998889999999987554434699988755
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
+.. .-...++.+..+.|+++|+|++.- ....+.++++|.+.||.+++..
T Consensus 99 mGg--~lI~~IL~~~~~~L~~~~~lIlq~-----------------------------~~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 99 MGG--TLIRTILEEGAAKLAGVTKLILQP-----------------------------NIAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp ECH--HHHHHHHHHTGGGGTTCCEEEEEE-----------------------------SSCHHHHHHHHHHHTEEEEEEE
T ss_pred Cch--HHHHHHHHHHHHHhCCCCEEEEEc-----------------------------CCChHHHHHHHHHCCCEEEEEE
Confidence 432 236788899999999999999841 1134688999999999987655
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.63 E-value=1.8e-15 Score=130.68 Aligned_cols=109 Identities=20% Similarity=0.207 Sum_probs=93.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
.....++..+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++....+ +++++.+|+.+....+
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccC
Confidence 345567777788889999999999999999999864 799999999999999999887654 7999999998733345
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++||+|++..+++|++ .++.++|||||++++..
T Consensus 133 ~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp CCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEE
Confidence 7899999999999986 36899999999999864
No 165
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.63 E-value=2.3e-15 Score=136.35 Aligned_cols=112 Identities=18% Similarity=0.242 Sum_probs=96.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 186 (359)
.....++..+.+.++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|+++....++. ++++..+|+.+.+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccc
Confidence 445667778888899999999999999999999853 357999999999999999999888875 59999999988554
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++++||+|++..+++|++ +++.++|||||++++..
T Consensus 141 ~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 141 EFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp GGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEB
T ss_pred cCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEE
Confidence 567899999999999987 57889999999999864
No 166
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.63 E-value=7e-15 Score=129.47 Aligned_cols=104 Identities=21% Similarity=0.295 Sum_probs=84.1
Q ss_pred CCCEEEEECCCCCh----HHHHHHhh-c----CCEEEEEeCCHHHHHHHHHHHHH-----------------------cC
Q 018194 122 AGDRILDVGCGVGG----PMRAIAAH-S----RANVVGITINEYQVNRARLHNKK-----------------------AG 169 (359)
Q Consensus 122 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~~v~g~D~s~~~~~~a~~~~~~-----------------------~~ 169 (359)
++.+|+|+|||||. ++..+++. + +.+|+|+|+|+.|++.|++.... .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55556554 2 36999999999999999986410 00
Q ss_pred -------CCCCeEEEEcCCCCCCCC-CCccceEEecccccccCCH--HHHHHHHHhccCCCCEEEE
Q 018194 170 -------LDSLCEVVCGNFLKMPFE-DNHFDGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 170 -------~~~~i~~~~~d~~~~~~~-~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~ 225 (359)
+..+|.|.++|+.+.+++ .++||+|+|.++++|+++. .++++++++.|+|||++++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 113699999999986665 5789999999999999754 7999999999999999987
No 167
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=1.6e-15 Score=132.57 Aligned_cols=107 Identities=20% Similarity=0.225 Sum_probs=90.6
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCC--CCccceE
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MPFE--DNHFDGA 194 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~--~~~fD~v 194 (359)
..++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.|++++...++.++++++++|+.+ ++.. .++||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 446789999999999999999985 3 689999999999999999999999988899999999876 2322 3489999
Q ss_pred EecccccccCCHHHHHHHHHhccCCCCEEEEEEee
Q 018194 195 YSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 195 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
++... .++...+++++.++|||||++++.+..
T Consensus 141 ~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 141 FIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp EECSC---GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred EECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 98653 456788999999999999999886543
No 168
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.62 E-value=1.6e-14 Score=124.34 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=101.8
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCc
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---FEDNH 190 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~ 190 (359)
..+.+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++... .+++++++|+.+.. ...++
T Consensus 67 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 67 KNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCC
T ss_pred HhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCC
Confidence 34457789999999999999999999863 479999999999999998887643 57999999998732 12368
Q ss_pred cceEEecccccccCCHH-HHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 191 FDGAYSIEATCHAPKLE-DVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~-~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
||+|++... .++.. .+++++.++|||||++++. +.... ........ . ....++.++ ++
T Consensus 144 ~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~-~~~~~~~~-~--------------~~~~~l~~l-~~ 202 (227)
T 1g8a_A 144 VDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA-VKSRS-IDVTKEPE-Q--------------VFREVEREL-SE 202 (227)
T ss_dssp EEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE-EEGGG-TCTTSCHH-H--------------HHHHHHHHH-HT
T ss_pred ceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE-EecCC-CCCCCChh-h--------------hhHHHHHHH-Hh
Confidence 999998654 33443 4599999999999999987 32221 11100000 1 123466666 77
Q ss_pred CCCeEEEEEec
Q 018194 270 VGFEVVKEKDL 280 (359)
Q Consensus 270 aGF~~i~~~~~ 280 (359)
+ |++++..++
T Consensus 203 ~-f~~~~~~~~ 212 (227)
T 1g8a_A 203 Y-FEVIERLNL 212 (227)
T ss_dssp T-SEEEEEEEC
T ss_pred h-ceeeeEecc
Confidence 7 999988776
No 169
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.62 E-value=5.7e-15 Score=130.58 Aligned_cols=106 Identities=22% Similarity=0.326 Sum_probs=87.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
..+.+...+. .++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.++++. .++.+..+|+.++++++
T Consensus 74 ~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~ 146 (269)
T 1p91_A 74 IVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSD 146 (269)
T ss_dssp HHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCT
T ss_pred HHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCC
Confidence 3344444332 46789999999999999999986 4689999999999999998764 36899999999988888
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEee
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
++||+|++..+. ..++++.++|||||++++....
T Consensus 147 ~~fD~v~~~~~~-------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 147 TSMDAIIRIYAP-------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp TCEEEEEEESCC-------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred CceeEEEEeCCh-------hhHHHHHHhcCCCcEEEEEEcC
Confidence 999999987653 2478999999999999987643
No 170
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.61 E-value=2.3e-15 Score=130.19 Aligned_cols=106 Identities=20% Similarity=0.332 Sum_probs=84.0
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHH------cCCCCCeEEEEcCCCC-CC--CCCC
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKK------AGLDSLCEVVCGNFLK-MP--FEDN 189 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~------~~~~~~i~~~~~d~~~-~~--~~~~ 189 (359)
..++.+|||||||+|.++..+++. ++..|+|+|+|+.|++.|++++.. .++ .|+.++++|+.+ ++ ++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCc
Confidence 345679999999999999999985 568999999999999999987654 233 579999999987 55 6788
Q ss_pred ccceEEecccccccCC--------HHHHHHHHHhccCCCCEEEEE
Q 018194 190 HFDGAYSIEATCHAPK--------LEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+||.|++.+.-.+... ...+++++.++|||||.|++.
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 9999987654332211 147999999999999999884
No 171
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=2.3e-15 Score=132.40 Aligned_cols=113 Identities=21% Similarity=0.193 Sum_probs=94.0
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEcCCCCC-----
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKK---AGLDSLCEVVCGNFLKM----- 184 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~---~~~~~~i~~~~~d~~~~----- 184 (359)
+...+...++.+|||+|||+|.++..+++. ++.+|+|+|+++.+++.|++++.. .++.++++++++|+.+.
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV 107 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh
Confidence 455667778889999999999999999986 457999999999999999999887 77777899999999886
Q ss_pred --CCCCCccceEEeccccccc------------------CCHHHHHHHHHhccCCCCEEEEE
Q 018194 185 --PFEDNHFDGAYSIEATCHA------------------PKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 185 --~~~~~~fD~v~~~~~l~~~------------------~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
++++++||+|+++-..... .+...+++.+.++|||||++++.
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 2557899999997333211 24788999999999999999884
No 172
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.61 E-value=4.9e-15 Score=133.86 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=106.5
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
.+...+.+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.++++....++. +++++++|+.+++...++
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 187 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVE 187 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCC
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccccccc
Confidence 34556678899999999999999999999853 479999999999999999999988875 699999999887644578
Q ss_pred cceEEecc------cccccCC----------------HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhh
Q 018194 191 FDGAYSIE------ATCHAPK----------------LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGI 248 (359)
Q Consensus 191 fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
||+|++.. ++.+.++ ...+|+++.++|||||++++.......
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~---------------- 251 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP---------------- 251 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG----------------
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh----------------
Confidence 99999842 2332232 158999999999999999886432211
Q ss_pred hcCCCCCCCCCHHHHHHHHHhCCCeEEEE
Q 018194 249 ERGDALPGLRSYAEITEIAKRVGFEVVKE 277 (359)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~aGF~~i~~ 277 (359)
......+...|++.||+.+..
T Consensus 252 --------~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 252 --------EENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp --------GGTHHHHHHHHHHSSEEEECC
T ss_pred --------HHhHHHHHHHHhcCCCEEecC
Confidence 012245667788889887643
No 173
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=4.6e-15 Score=136.99 Aligned_cols=115 Identities=18% Similarity=0.215 Sum_probs=95.9
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCC--CeEEEEcCCCCCCCCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDS--LCEVVCGNFLKMPFED 188 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~--~i~~~~~d~~~~~~~~ 188 (359)
+.+++.+...++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.++++....++.. ++++..+|+.+ ++++
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~ 290 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEP 290 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCT
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCC
Confidence 45677777777899999999999999999985 47899999999999999999998887653 58889999987 5667
Q ss_pred CccceEEecccccccC-----CHHHHHHHHHhccCCCCEEEEEE
Q 018194 189 NHFDGAYSIEATCHAP-----KLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++||+|+++..+++.. ....+++++.++|||||+++++.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 8999999998887532 23478999999999999999863
No 174
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.61 E-value=2.1e-15 Score=135.65 Aligned_cols=139 Identities=21% Similarity=0.305 Sum_probs=102.9
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEcCCCCCCC--CCCccce
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKK---AGLDSLCEVVCGNFLKMPF--EDNHFDG 193 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~---~~~~~~i~~~~~d~~~~~~--~~~~fD~ 193 (359)
..++.+|||||||+|.++..+++. +..+|+++|+|+.+++.+++++.. ....++++++.+|+.+.+. ++++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356789999999999999999986 356999999999999999998742 1224579999999987543 4689999
Q ss_pred EEecccccccCCH----HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 194 AYSIEATCHAPKL----EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 194 v~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
|++.....+.+.. ..+++++.++|||||++++..... +. .......+.+.|++
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~---~~--------------------~~~~~~~~~~~l~~ 229 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI---WL--------------------DLELIEKMSRFIRE 229 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT---TT--------------------CHHHHHHHHHHHHH
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc---cc--------------------chHHHHHHHHHHHh
Confidence 9997665443332 689999999999999999852110 00 00124578889999
Q ss_pred CCCeEEEEEecC
Q 018194 270 VGFEVVKEKDLA 281 (359)
Q Consensus 270 aGF~~i~~~~~~ 281 (359)
+||..+......
T Consensus 230 ~GF~~v~~~~~~ 241 (304)
T 3bwc_A 230 TGFASVQYALMH 241 (304)
T ss_dssp HTCSEEEEEECC
T ss_pred CCCCcEEEEEee
Confidence 999988876553
No 175
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.60 E-value=2.8e-15 Score=142.59 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=98.9
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
+...+.+++.+...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|++++...++.++++++.+|+.+++++
T Consensus 144 ~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 144 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC
Confidence 344556666666667899999999999999999987557999999998 9999999999999888999999999987665
Q ss_pred CCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEE
Q 018194 188 DNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~ 225 (359)
++||+|++..+++|+. +....+.++.++|||||.+++
T Consensus 223 -~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 223 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp -SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred -CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 5899999988777764 356788899999999999985
No 176
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.60 E-value=1.3e-15 Score=133.37 Aligned_cols=118 Identities=10% Similarity=0.064 Sum_probs=90.6
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHc---CCCCC----------
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKA---GLDSL---------- 173 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~---~~~~~---------- 173 (359)
....++..+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|+++.... ++..+
T Consensus 39 l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 39 IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSER 118 (250)
T ss_dssp HHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhh
Confidence 4444555555456789999999999999999875 3579999999999999999877654 33222
Q ss_pred ---------------eE-------------EEEcCCCCCCC-----CCCccceEEecccccccCC---------HHHHHH
Q 018194 174 ---------------CE-------------VVCGNFLKMPF-----EDNHFDGAYSIEATCHAPK---------LEDVYA 211 (359)
Q Consensus 174 ---------------i~-------------~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~~~---------~~~~l~ 211 (359)
++ +.++|+.+... ..++||+|+++..+.+..+ ...+++
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~ 198 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR 198 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH
Confidence 66 99999987321 3458999999876655433 458999
Q ss_pred HHHhccCCCCEEEEEE
Q 018194 212 EVFRVLKPGSLYVSYE 227 (359)
Q Consensus 212 ~~~~~LkpgG~l~~~~ 227 (359)
++.++|||||+++++.
T Consensus 199 ~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 199 SLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHSCTTCEEEEEE
T ss_pred HHHHhcCCCcEEEEeC
Confidence 9999999999999843
No 177
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.60 E-value=2.4e-15 Score=130.08 Aligned_cols=112 Identities=25% Similarity=0.351 Sum_probs=94.0
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCC--CC
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-PFE--DN 189 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~ 189 (359)
+...+...++.+|||+|||+|..+..+++. ++.+|+++|+|+.+++.|++++...++.++++++.+|+.+. +.. ++
T Consensus 46 l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 125 (233)
T 2gpy_A 46 LLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYP 125 (233)
T ss_dssp HHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSC
T ss_pred HHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCC
Confidence 333444457789999999999999999985 46899999999999999999999888877899999999874 322 57
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+||+|++.... .+...+++++.++|||||++++.++
T Consensus 126 ~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 126 LFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp CEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 89999997764 4788999999999999999998643
No 178
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.59 E-value=1.1e-14 Score=125.25 Aligned_cols=109 Identities=23% Similarity=0.253 Sum_probs=90.4
Q ss_pred HHHHhcC--CCCCCEEEEECCCCChHHHHHHhhcC--CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCC
Q 018194 113 MAVDLID--VKAGDRILDVGCGVGGPMRAIAAHSR--ANVVGITINEYQVNRARLHNKKAGL----DSLCEVVCGNFLKM 184 (359)
Q Consensus 113 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~ 184 (359)
.++..+. +.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.++++....+. ..++++.++|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 3444443 67889999999999999999998533 6999999999999999999887653 35799999999876
Q ss_pred CCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 185 PFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 185 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+...++||+|++...++++. +++.++|||||++++..
T Consensus 146 ~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPV 182 (226)
T ss_dssp CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred cccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEE
Confidence 55567899999998887664 68899999999999864
No 179
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.59 E-value=3.4e-15 Score=128.20 Aligned_cols=106 Identities=21% Similarity=0.245 Sum_probs=89.3
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CC---CCccc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FE---DNHFD 192 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~---~~~fD 192 (359)
..++.+|||||||+|..+..+++. + +++|+++|+++.+++.+++++...++.++++++++|+.+.. ++ .++||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 346789999999999999999985 3 67999999999999999999999998878999999996531 11 26799
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+|++... .++...+++++.++|||||++++.+.
T Consensus 136 ~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 136 FIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9998765 34667899999999999998887543
No 180
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.59 E-value=1.9e-14 Score=132.42 Aligned_cols=117 Identities=18% Similarity=0.158 Sum_probs=99.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 186 (359)
.+...++......++.+|||+|||+|.++..++.. ++.+|+|+|+|+.+++.|++++...++. ++++.++|+.+++.
T Consensus 190 ~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 190 VLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPR 268 (354)
T ss_dssp HHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcc
Confidence 34556677778888999999999999999999985 4589999999999999999999999987 89999999999887
Q ss_pred CCCccceEEecccccccC--------CHHHHHHHHHhccCCCCEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAP--------KLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~--------~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+.+.||+|+++-...... ....+++++.++|||||.+++.
T Consensus 269 ~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 269 FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 777899999975543211 1368999999999999999985
No 181
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.59 E-value=5.9e-15 Score=135.27 Aligned_cols=113 Identities=21% Similarity=0.195 Sum_probs=92.6
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCc
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNH 190 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 190 (359)
.+.|.+.....+|.+|||||||+|.++...|+....+|+++|.|+ +++.|++.++..++.++|+++++|++++.++ ++
T Consensus 72 ~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~ 149 (376)
T 4hc4_A 72 RLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQ 149 (376)
T ss_dssp HHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SC
T ss_pred HHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-cc
Confidence 344443333346889999999999999888876446899999996 8899999999999999999999999998876 68
Q ss_pred cceEEecc---cccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 191 FDGAYSIE---ATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 191 fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
||+|++-. .+.+-.....++....++|||||.++-
T Consensus 150 ~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 150 VDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp EEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 99999843 444445688999999999999999874
No 182
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.58 E-value=7.6e-15 Score=127.15 Aligned_cols=110 Identities=21% Similarity=0.262 Sum_probs=92.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED- 188 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~- 188 (359)
....+++.+.+.++.+|||+|||+|.++..+++..+.+|+++|+|+.+++.++++....++. ++++..+|+ ..+++.
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~-~~~~~~~ 156 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDG-SKGFPPK 156 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCG-GGCCGGG
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCc-ccCCCCC
Confidence 44556667788889999999999999999999864479999999999999999999888765 599999998 334443
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
..||+|++..+++++++ ++.+.|||||++++..
T Consensus 157 ~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEE
Confidence 35999999999988763 7889999999999854
No 183
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.58 E-value=9.2e-15 Score=129.07 Aligned_cols=148 Identities=16% Similarity=0.166 Sum_probs=97.2
Q ss_pred HHHhcCCC-CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeE-EEEcCCCCCC---CCC
Q 018194 114 AVDLIDVK-AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCE-VVCGNFLKMP---FED 188 (359)
Q Consensus 114 ~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~-~~~~d~~~~~---~~~ 188 (359)
++..+.+. ++.+|||+|||||.++..+++....+|+|+|+|+.|++.+.+.. +++. +...|+..++ ++.
T Consensus 76 ~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~~l~~ 149 (291)
T 3hp7_A 76 ALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPVDFTE 149 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGGGCTT
T ss_pred HHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchhhCCC
Confidence 44445444 57899999999999999998874469999999999998854321 2232 2233443332 344
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCC----CCCCHHHHH
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALP----GLRSYAEIT 264 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 264 (359)
.+||+|++..++++ ...+|.++.++|||||.+++.. .+.+...... +..+.... +....+++.
T Consensus 150 ~~fD~v~~d~sf~s---l~~vL~e~~rvLkpGG~lv~lv---kPqfe~~~~~-------~~~~G~vrd~~~~~~~~~~v~ 216 (291)
T 3hp7_A 150 GLPSFASIDVSFIS---LNLILPALAKILVDGGQVVALV---KPQFEAGREQ-------IGKNGIVRESSIHEKVLETVT 216 (291)
T ss_dssp CCCSEEEECCSSSC---GGGTHHHHHHHSCTTCEEEEEE---CGGGTSCGGG-------CC-CCCCCCHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeHhh---HHHHHHHHHHHcCcCCEEEEEE---CcccccChhh-------cCCCCccCCHHHHHHHHHHHH
Confidence 56999999887764 4789999999999999999852 1111111000 00000000 112457889
Q ss_pred HHHHhCCCeEEEEEec
Q 018194 265 EIAKRVGFEVVKEKDL 280 (359)
Q Consensus 265 ~~l~~aGF~~i~~~~~ 280 (359)
++++++||.+.....-
T Consensus 217 ~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 217 AFAVDYGFSVKGLDFS 232 (291)
T ss_dssp HHHHHTTEEEEEEEEC
T ss_pred HHHHHCCCEEEEEEEC
Confidence 9999999998876543
No 184
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.58 E-value=1.1e-14 Score=125.39 Aligned_cols=110 Identities=18% Similarity=0.182 Sum_probs=91.4
Q ss_pred HHHHhc--CCCCCCEEEEECCCCChHHHHHHhhcC------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcC
Q 018194 113 MAVDLI--DVKAGDRILDVGCGVGGPMRAIAAHSR------ANVVGITINEYQVNRARLHNKKAGL----DSLCEVVCGN 180 (359)
Q Consensus 113 ~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~g~D~s~~~~~~a~~~~~~~~~----~~~i~~~~~d 180 (359)
.+++.+ .+.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|+++....++ ..++++..+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 344444 467889999999999999999998643 6999999999999999999888763 3579999999
Q ss_pred CCCCC----CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 181 FLKMP----FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 181 ~~~~~----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+.+.. ...++||+|++...++++. +++.++|||||++++...
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASELP------EILVDLLAENGKLIIPIE 194 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSCC------HHHHHHEEEEEEEEEEEE
T ss_pred hHhcccccCccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEc
Confidence 98754 4567899999999888763 788999999999998643
No 185
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.57 E-value=3.9e-15 Score=127.97 Aligned_cols=108 Identities=16% Similarity=0.202 Sum_probs=90.5
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CCC----Ccc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P-FED----NHF 191 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~----~~f 191 (359)
..++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.+++++...++.++++++++|+.+. + +.. ++|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 346789999999999999999985 3 6899999999999999999999999887899999998653 2 111 789
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeee
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
|+|++... ..+...+++++.++|||||++++.+...
T Consensus 142 D~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 142 DLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred cEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 99997553 3467889999999999999999865443
No 186
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.57 E-value=1.7e-15 Score=124.33 Aligned_cols=101 Identities=21% Similarity=0.253 Sum_probs=84.6
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CC--CCccceEEec
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P-FE--DNHFDGAYSI 197 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~--~~~fD~v~~~ 197 (359)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++ +++++++|+.+. + .+ .++||+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 6789999999999999999986 45799999999999999999988776 799999998763 2 11 2479999998
Q ss_pred ccccccCCHHHHHHHHH--hccCCCCEEEEEE
Q 018194 198 EATCHAPKLEDVYAEVF--RVLKPGSLYVSYE 227 (359)
Q Consensus 198 ~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~ 227 (359)
..++ .+...+++.+. ++|||||.+++..
T Consensus 118 ~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 118 PPYA--MDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp CCTT--SCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred CCCc--hhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 7765 56667777777 9999999998854
No 187
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.57 E-value=3.4e-15 Score=127.06 Aligned_cols=102 Identities=22% Similarity=0.184 Sum_probs=87.6
Q ss_pred CCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccceEEecc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-PFEDNHFDGAYSIE 198 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~v~~~~ 198 (359)
++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.|++++...++.++++++++|+.+. +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 5679999999999999999985 3 6799999999999999999998888777899999999763 43346 99999874
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
. ..+...+++++.++|||||++++.+
T Consensus 135 ~---~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D---VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T---TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C---hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2 4578899999999999999998854
No 188
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.57 E-value=1.3e-14 Score=129.19 Aligned_cols=114 Identities=26% Similarity=0.337 Sum_probs=91.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
.+.+.++..+...++.+|||+|||+|.++..+++.++++|+|+|+|+.+++.|++++...++.++++++++|+.+. ++
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~- 187 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK- 187 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-
Confidence 3444444444334667999999999999999988766899999999999999999999988877799999999873 33
Q ss_pred Ccc---ceEEecc------------cccccC--------CHHHHHHHHH-hccCCCCEEEE
Q 018194 189 NHF---DGAYSIE------------ATCHAP--------KLEDVYAEVF-RVLKPGSLYVS 225 (359)
Q Consensus 189 ~~f---D~v~~~~------------~l~~~~--------~~~~~l~~~~-~~LkpgG~l~~ 225 (359)
++| |+|+++- +. |-| |...+++++. +.|+|||++++
T Consensus 188 ~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 188 EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 579 9999972 22 222 2237899999 99999999997
No 189
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.56 E-value=2.2e-14 Score=130.21 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=87.9
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCC----CCCccceE
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS-LCEVVCGNFLKMPF----EDNHFDGA 194 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~fD~v 194 (359)
..++.+|||+|||+|.++..+++. +++|+++|+|+.+++.|++++...++.+ +++++++|+.+... ..++||+|
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred cCCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 346789999999999999999985 5699999999999999999999888765 59999999977431 14689999
Q ss_pred Eeccc----------ccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 195 YSIEA----------TCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 195 ~~~~~----------l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++.-. ..+..+...+++++.++|||||.+++..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 99432 1233457899999999999999987754
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.56 E-value=7.3e-16 Score=134.07 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=90.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CC-----CCccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FE-----DNHFD 192 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~-----~~~fD 192 (359)
.++.+|||||||+|..+..+++. .+++|+++|+++.+++.|++++...++.++++++++|+.+.. .. .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 45679999999999999999984 268999999999999999999999998889999999997642 11 47899
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeee
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
+|++... ..+...+++++.++|||||++++.+...
T Consensus 139 ~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 139 FIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp EEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred EEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 9998764 3467889999999999999999865443
No 191
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.56 E-value=8.8e-15 Score=126.06 Aligned_cols=109 Identities=22% Similarity=0.296 Sum_probs=89.7
Q ss_pred HHHHHhc--CCCCCCEEEEECCCCChHHHHHHhhcC-------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEE
Q 018194 112 EMAVDLI--DVKAGDRILDVGCGVGGPMRAIAAHSR-------ANVVGITINEYQVNRARLHNKKAGL----DSLCEVVC 178 (359)
Q Consensus 112 ~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~~v~g~D~s~~~~~~a~~~~~~~~~----~~~i~~~~ 178 (359)
..+++.+ .+.++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.++++....+. ..++++..
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 3445555 467889999999999999999988533 5999999999999999998876541 24799999
Q ss_pred cCCCCCCCCC-CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 179 GNFLKMPFED-NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 179 ~d~~~~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+.+ ++++ ++||+|++..++++++ +++.+.|||||++++..
T Consensus 152 ~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 152 GDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPV 194 (227)
T ss_dssp SCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred CCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEE
Confidence 99987 4444 7899999999988875 68899999999999854
No 192
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.56 E-value=3.7e-15 Score=129.07 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh-----cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCC-Cccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-----SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM---PFED-NHFD 192 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-----~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~-~~fD 192 (359)
++.+|||||||+|..+..+++. ++++|+|+|+|+.+++.|+. +..+++++++|+.+. +... .+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCC
Confidence 4679999999999999999885 46899999999999988761 235799999999884 4333 4799
Q ss_pred eEEecccccccCCHHHHHHHHHh-ccCCCCEEEEEEe
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFR-VLKPGSLYVSYEW 228 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~-~LkpgG~l~~~~~ 228 (359)
+|++... | .+...++.++.+ +|||||++++.+.
T Consensus 155 ~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 155 LIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9998665 3 378899999997 9999999998543
No 193
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.56 E-value=6.4e-14 Score=123.22 Aligned_cols=136 Identities=15% Similarity=0.192 Sum_probs=108.6
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccc
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFD 192 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 192 (359)
.+.+. ..+|.+|||+|||+|.++..+++...++|+++|+||.+++.++++++.+++.++++++++|+.+++ +.+.||
T Consensus 118 ri~~~--~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D 194 (278)
T 3k6r_A 118 RMAKV--AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIAD 194 (278)
T ss_dssp HHHHH--CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEE
T ss_pred HHHHh--cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCC
Confidence 34444 357899999999999999999987667999999999999999999999999999999999998875 357899
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCC
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGF 272 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 272 (359)
.|++... +....++..+.++|||||++.++++....... -...+.+.++.++.|+
T Consensus 195 ~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~---------------------~~~~e~i~~~~~~~g~ 249 (278)
T 3k6r_A 195 RILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP---------------------REPFETFKRITKEYGY 249 (278)
T ss_dssp EEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT---------------------TTTHHHHHHHHHHTTC
T ss_pred EEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeecccccc---------------------hhHHHHHHHHHHHcCC
Confidence 9987643 34557788889999999999887665432111 1134567788899999
Q ss_pred eEEE
Q 018194 273 EVVK 276 (359)
Q Consensus 273 ~~i~ 276 (359)
++..
T Consensus 250 ~v~~ 253 (278)
T 3k6r_A 250 DVEK 253 (278)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 8643
No 194
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.56 E-value=1.2e-14 Score=119.78 Aligned_cols=98 Identities=17% Similarity=0.194 Sum_probs=83.8
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCC
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--------FED 188 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~ 188 (359)
.+.++.+|||+|||+|.++..+++. ++.+++++|+|+ +++. .++++.++|+.+.+ +++
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCC
Confidence 3678889999999999999999986 357999999999 6532 46899999998876 667
Q ss_pred CccceEEecccccccCCH-----------HHHHHHHHhccCCCCEEEEEEe
Q 018194 189 NHFDGAYSIEATCHAPKL-----------EDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
++||+|++...+++..+. ..+++++.++|+|||.+++..+
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 899999999888877665 7899999999999999998654
No 195
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.55 E-value=9.8e-15 Score=133.65 Aligned_cols=113 Identities=19% Similarity=0.266 Sum_probs=94.8
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN 189 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 189 (359)
.+.+++.+...++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++....++. +++..+|+.+.+ ++
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~--~~ 260 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV--KG 260 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC--CS
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc--cC
Confidence 345666665556789999999999999999985 4569999999999999999999887754 678899987643 67
Q ss_pred ccceEEecccccc-----cCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 190 HFDGAYSIEATCH-----APKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 190 ~fD~v~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+||+|+++..+++ ..+...+++++.++|||||.+++..
T Consensus 261 ~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9999999998875 3457899999999999999999864
No 196
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.55 E-value=7.2e-15 Score=128.17 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=89.3
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-C-----CCCcc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P-F-----EDNHF 191 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~f 191 (359)
.++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.|++++...++.++++++.+|+.+. + + +.++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 45679999999999999999985 3 6899999999999999999999988877899999998763 2 2 15789
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+|++... ..+...+++++.++|||||++++.+
T Consensus 158 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998754 3467899999999999999998854
No 197
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.55 E-value=1.8e-15 Score=147.52 Aligned_cols=107 Identities=22% Similarity=0.272 Sum_probs=90.8
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEeccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--PFEDNHFDGAYSIEA 199 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~v~~~~~ 199 (359)
.+.+|||||||+|.++..||+. |++|+|||+|+.+++.|+.++.+.+.. +++|.+++++++ ++++++||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 4679999999999999999996 889999999999999999998877632 699999999887 356789999999999
Q ss_pred ccccCCHH--HHHHHHHhccCCCCEEEEEEeee
Q 018194 200 TCHAPKLE--DVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 200 l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
++|++|+. ..+..+.+.|+++|..++..+..
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99998865 33556788899998877765433
No 198
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.55 E-value=4.2e-15 Score=128.17 Aligned_cols=149 Identities=11% Similarity=0.151 Sum_probs=90.5
Q ss_pred HHHhcCCC-CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCeEEEE-cCCCCCCCCCC
Q 018194 114 AVDLIDVK-AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGL--DSLCEVVC-GNFLKMPFEDN 189 (359)
Q Consensus 114 ~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~--~~~i~~~~-~d~~~~~~~~~ 189 (359)
+++.+.+. ++.+|||||||+|.++..+++....+|+|+|+|+.|++.++++...... ..++.+.. .|+.. .
T Consensus 28 ~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 102 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-----G 102 (232)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS-----C
T ss_pred HHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc-----C
Confidence 34444443 5679999999999999999987335999999999999987765332110 01222222 22221 1
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCC----CCCCCHHHHHH
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDAL----PGLRSYAEITE 265 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 265 (359)
.||.+.+..++.++ ..++++++++|||||++++.. .+.+... ...+...... .+..+.+++.+
T Consensus 103 ~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~---~p~~e~~-------~~~~~~~G~~~d~~~~~~~~~~l~~ 169 (232)
T 3opn_A 103 RPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI---KPQFEAG-------REQVGKNGIIRDPKVHQMTIEKVLK 169 (232)
T ss_dssp CCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE---CHHHHSC-------HHHHC-CCCCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE---CcccccC-------HHHhCcCCeecCcchhHHHHHHHHH
Confidence 23444443333333 779999999999999999852 1111110 0001000000 01225678999
Q ss_pred HHHhCCCeEEEEEec
Q 018194 266 IAKRVGFEVVKEKDL 280 (359)
Q Consensus 266 ~l~~aGF~~i~~~~~ 280 (359)
+++++||+++.....
T Consensus 170 ~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 170 TATQLGFSVKGLTFS 184 (232)
T ss_dssp HHHHHTEEEEEEEEC
T ss_pred HHHHCCCEEEEEEEc
Confidence 999999999887654
No 199
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.54 E-value=3.4e-14 Score=123.91 Aligned_cols=105 Identities=24% Similarity=0.363 Sum_probs=84.5
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHc--------CCCCCeEEEEcCCCC-CC--CCC
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKA--------GLDSLCEVVCGNFLK-MP--FED 188 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~--------~~~~~i~~~~~d~~~-~~--~~~ 188 (359)
.++.+|||||||+|.++..+++. ++..|+|+|+|+.+++.+++++... ++ .|+.++.+|+.+ ++ ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 46789999999999999999985 4579999999999999999988765 55 479999999987 55 667
Q ss_pred CccceEEecccccccCC--------HHHHHHHHHhccCCCCEEEEE
Q 018194 189 NHFDGAYSIEATCHAPK--------LEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+++|.|+....-.+... ...+++++.++|+|||.+++.
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 89999986542111100 158999999999999999984
No 200
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.53 E-value=5.6e-14 Score=129.91 Aligned_cols=139 Identities=19% Similarity=0.239 Sum_probs=108.7
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
....++... ..++.+|||+|||+|.++..++.... ++|+|+|+|+.|++.|++++...++.+++++.++|+.++++++
T Consensus 206 la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~ 284 (373)
T 3tm4_A 206 IANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYV 284 (373)
T ss_dssp HHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTC
T ss_pred HHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCccc
Confidence 334445555 67889999999999999999998532 3999999999999999999999998778999999999988877
Q ss_pred CccceEEeccccccc-------CC-HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCH
Q 018194 189 NHFDGAYSIEATCHA-------PK-LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSY 260 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~-------~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (359)
++||+|+++...... .+ ...+++++.++| ||.++++.. +.
T Consensus 285 ~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~------------------------------~~ 332 (373)
T 3tm4_A 285 DSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT------------------------------EK 332 (373)
T ss_dssp SCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES------------------------------CH
T ss_pred CCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC------------------------------CH
Confidence 899999997654321 12 267888899988 555554311 34
Q ss_pred HHHHHHHHhCCCeEEEEEecC
Q 018194 261 AEITEIAKRVGFEVVKEKDLA 281 (359)
Q Consensus 261 ~~~~~~l~~aGF~~i~~~~~~ 281 (359)
..+.+.+++.||+..+...+.
T Consensus 333 ~~~~~~~~~~G~~~~~~~~~~ 353 (373)
T 3tm4_A 333 KAIEEAIAENGFEIIHHRVIG 353 (373)
T ss_dssp HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEEEEE
Confidence 577788999999998876653
No 201
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.53 E-value=5.2e-14 Score=124.70 Aligned_cols=113 Identities=14% Similarity=0.164 Sum_probs=92.8
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhh-cC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----C
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF----E 187 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~ 187 (359)
+...+...++.+|||+|||+|..+..+++. .+ .+|+++|+|+.+++.++++....++. +++++++|+.+++. .
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKN 153 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHT
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhc
Confidence 345567788999999999999999999984 34 79999999999999999999988875 79999999987653 2
Q ss_pred CCccceEEecccc------c------------ccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEAT------C------------HAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l------~------------~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.++||+|++.... . .......+++++.++|||||++++..
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 5789999986221 1 11356789999999999999998864
No 202
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.53 E-value=2.4e-13 Score=125.82 Aligned_cols=130 Identities=12% Similarity=0.056 Sum_probs=101.4
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCC-CCCccceEEe
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MPF-EDNHFDGAYS 196 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~fD~v~~ 196 (359)
..++.+|||+| |+|.++..++.. +..+|+++|+|+.+++.|+++++..++. +++++++|+.+ ++. .+++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 34678999999 999999999885 3369999999999999999999988876 89999999988 653 3468999999
Q ss_pred cccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCH---HHHHHHHH-hCCC
Q 018194 197 IEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSY---AEITEIAK-RVGF 272 (359)
Q Consensus 197 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~-~aGF 272 (359)
+..++.. ....+++++.++|||||++++++.... ..+. ..+.+.++ +.||
T Consensus 248 ~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~~~~g~ 301 (373)
T 2qm3_A 248 DPPETLE-AIRAFVGRGIATLKGPRCAGYFGITRR-------------------------ESSLDKWREIQKLLLNEFNV 301 (373)
T ss_dssp CCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECTT-------------------------TCCHHHHHHHHHHHHHTSCC
T ss_pred CCCCchH-HHHHHHHHHHHHcccCCeEEEEEEecC-------------------------cCCHHHHHHHHHHHHHhcCc
Confidence 8765433 358899999999999996544332210 0122 45667777 8999
Q ss_pred eEEEE
Q 018194 273 EVVKE 277 (359)
Q Consensus 273 ~~i~~ 277 (359)
.....
T Consensus 302 ~~~~~ 306 (373)
T 2qm3_A 302 VITDI 306 (373)
T ss_dssp EEEEE
T ss_pred chhhh
Confidence 87654
No 203
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.53 E-value=1.8e-14 Score=125.11 Aligned_cols=109 Identities=21% Similarity=0.294 Sum_probs=90.3
Q ss_pred hcCCCCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C--------
Q 018194 117 LIDVKAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P-------- 185 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-------- 185 (359)
.+...++.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.+++++..+|+.+. +
T Consensus 55 l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 55 LTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp HHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSC
T ss_pred HHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccc
Confidence 3344567899999999999999999863 5799999999999999999999888776799999998652 2
Q ss_pred ------CCC--CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 186 ------FED--NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 186 ------~~~--~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+++ ++||+|++... .++...+++++.++|||||++++.+.
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccccccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 222 78999998754 34667899999999999999998653
No 204
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.52 E-value=1.8e-13 Score=129.68 Aligned_cols=117 Identities=17% Similarity=0.338 Sum_probs=95.7
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FE 187 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~ 187 (359)
..+...+...++.+|||+|||+|..+..+++. .+ .+|+++|+|+.+++.++++....|+. +++++++|+.+.+ ++
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 327 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIG 327 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSC
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhc
Confidence 34455667889999999999999999999985 33 69999999999999999999988874 7999999998876 55
Q ss_pred CCccceEEe------cccccccCCH----------------HHHHHHHHhccCCCCEEEEEEee
Q 018194 188 DNHFDGAYS------IEATCHAPKL----------------EDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 188 ~~~fD~v~~------~~~l~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
+++||+|++ ..++.+.++. ..+++++.++|||||++++.+..
T Consensus 328 ~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 328 EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp SSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred cCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 578999996 2344444443 57899999999999999986543
No 205
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=6.9e-14 Score=123.72 Aligned_cols=107 Identities=15% Similarity=0.046 Sum_probs=92.2
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEec
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSI 197 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~ 197 (359)
.+.++.+|||+|||+|.++..+++. ..++|+++|+|+.+++.|+++++..++. ++.++++|+.+.+. .++||+|++.
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~-~~~~D~Vi~d 193 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVEL-KDVADRVIMG 193 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCC-TTCEEEEEEC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCc-cCCceEEEEC
Confidence 4567899999999999999999986 3569999999999999999999988875 68999999988743 5789999987
Q ss_pred ccccccCCHHHHHHHHHhccCCCCEEEEEEeeeC
Q 018194 198 EATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTT 231 (359)
Q Consensus 198 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 231 (359)
... +...++.++.+.|||||++++.++...
T Consensus 194 ~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 194 YVH----KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp CCS----SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred Ccc----cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 653 677889999999999999998776553
No 206
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.52 E-value=2.3e-14 Score=123.89 Aligned_cols=106 Identities=17% Similarity=0.186 Sum_probs=88.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC----CCCC--Cccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM----PFED--NHFD 192 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~--~~fD 192 (359)
.++.+|||||||+|..+..+++.. +.+|+++|+|+.+++.|++++...++.++++++.+|+.+. +..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 356799999999999999999853 5799999999999999999999888877899999997542 2223 7899
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEEee
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
+|++... .++...+++++.++|+|||++++.+..
T Consensus 151 ~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 151 LIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 9998754 346788999999999999999986543
No 207
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.51 E-value=1.4e-14 Score=132.11 Aligned_cols=98 Identities=21% Similarity=0.310 Sum_probs=81.9
Q ss_pred CCCEEEEECCC------CChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------
Q 018194 122 AGDRILDVGCG------VGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE------ 187 (359)
Q Consensus 122 ~~~~vLDiGcG------~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------ 187 (359)
++.+||||||| +|..+..+++. ++++|+|+|+|+.|.. ..++++++++|+.++++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhcc
Confidence 46899999999 77777777763 6789999999999831 135899999999998766
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEeee
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
+++||+|++.. .++..+...+|++++++|||||++++.++..
T Consensus 286 d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 286 YGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp HCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred cCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 68999999875 4667789999999999999999999987653
No 208
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.51 E-value=2.4e-14 Score=123.36 Aligned_cols=107 Identities=17% Similarity=0.202 Sum_probs=89.7
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCC----Ccc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--PFED----NHF 191 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~----~~f 191 (359)
..++.+|||+|||+|..+..+++. + +.+|+++|+|+.+++.+++++...++..+++++++|+.+. .++. ++|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 346789999999999999999985 3 5799999999999999999999988877899999998653 1211 689
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEee
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
|+|++... ..+...+++++.++|+|||.+++.+..
T Consensus 147 D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 147 DVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred cEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 99998654 346788999999999999999986543
No 209
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.49 E-value=3.9e-14 Score=122.78 Aligned_cols=104 Identities=12% Similarity=0.195 Sum_probs=88.6
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-C-----CCCcc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P-F-----EDNHF 191 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~f 191 (359)
.++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.|+++++..++.++++++++|+.+. + + +.++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 45679999999999999999985 3 6899999999999999999999988877899999998763 2 2 25789
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+|++... ..+...+++++.++|||||.+++.+
T Consensus 149 D~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99998643 3467889999999999999998754
No 210
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.49 E-value=1.2e-13 Score=123.05 Aligned_cols=113 Identities=20% Similarity=0.237 Sum_probs=87.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+..++++++++|+.+.+++
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~- 92 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP- 92 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch-
Confidence 44566777888888999999999999999999986 5699999999999999999887665546899999999987654
Q ss_pred CccceEEecccccccCCH-HHHH--------------HHH--HhccCCCCEEE
Q 018194 189 NHFDGAYSIEATCHAPKL-EDVY--------------AEV--FRVLKPGSLYV 224 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~-~~~l--------------~~~--~~~LkpgG~l~ 224 (359)
+||+|+++...+...+. ..++ +++ +++++|||.++
T Consensus 93 -~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 -FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp -CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred -hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 79999997544332211 1222 223 46899999864
No 211
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.49 E-value=1.3e-13 Score=116.21 Aligned_cols=96 Identities=19% Similarity=0.202 Sum_probs=77.4
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----------
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHS---RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----------- 185 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------- 185 (359)
+.++.+|||+|||+|.++..+++.. +++|+|+|+|+.. . .++++++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-~~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-IPNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-CTTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-CCCceEEEccccchhhhhhccccccc
Confidence 5678899999999999999999853 4799999999831 1 246899999998876
Q ss_pred --------------CCCCccceEEeccccccc----CCH-------HHHHHHHHhccCCCCEEEEEE
Q 018194 186 --------------FEDNHFDGAYSIEATCHA----PKL-------EDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 --------------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+++++||+|++..++++. .+. ..+++++.++|||||.+++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 566799999998877653 222 247899999999999998743
No 212
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.48 E-value=2.1e-12 Score=109.27 Aligned_cols=128 Identities=13% Similarity=0.083 Sum_probs=98.2
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....++ +++++++|+.+++ ++||+|+++.
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~ 120 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNP 120 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcC
Confidence 4557889999999999999999986335899999999999999999887766 6999999998864 4899999988
Q ss_pred cccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEE
Q 018194 199 ATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVK 276 (359)
Q Consensus 199 ~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~ 276 (359)
.+++.. ....+++++.+++ |+. ++..... .. +.+.+.+.+++.||++..
T Consensus 121 p~~~~~~~~~~~~l~~~~~~l--~~~-~~~~~~~--------~~------------------~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 121 PFGSQRKHADRPFLLKAFEIS--DVV-YSIHLAK--------PE------------------VRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp CCSSSSTTTTHHHHHHHHHHC--SEE-EEEEECC--------HH------------------HHHHHHHHHHHTTEEEEE
T ss_pred CCccccCCchHHHHHHHHHhc--CcE-EEEEeCC--------cC------------------CHHHHHHHHHHCCCeEEE
Confidence 776654 3467889999988 544 3322100 00 124566788999998876
Q ss_pred EEec
Q 018194 277 EKDL 280 (359)
Q Consensus 277 ~~~~ 280 (359)
....
T Consensus 172 ~~~~ 175 (207)
T 1wy7_A 172 RLTT 175 (207)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 213
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.47 E-value=1.6e-13 Score=122.31 Aligned_cols=107 Identities=20% Similarity=0.257 Sum_probs=82.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcC----CCCCeEEEEcCCCCC-CCCCCccceE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAG----LDSLCEVVCGNFLKM-PFEDNHFDGA 194 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~----~~~~i~~~~~d~~~~-~~~~~~fD~v 194 (359)
.++.+|||||||+|.+++.++++. ..+|+++|+|+.+++.|++++...+ -.++++++.+|+.+. ....++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 346799999999999999999863 4699999999999999999877542 135899999998774 3346789999
Q ss_pred EecccccccCC----HHHHHHHHHhccCCCCEEEEEE
Q 018194 195 YSIEATCHAPK----LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 195 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++.......+. ...+++++.++|||||++++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99654332222 1789999999999999999853
No 214
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.46 E-value=1.1e-12 Score=110.60 Aligned_cols=90 Identities=12% Similarity=0.114 Sum_probs=73.7
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++.. +++++++|+.+++ ++||+|+++.
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~ 118 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNP 118 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECC
Confidence 455788999999999999999998733479999999999999998754 5899999998864 6899999999
Q ss_pred cccccCC--HHHHHHHHHhcc
Q 018194 199 ATCHAPK--LEDVYAEVFRVL 217 (359)
Q Consensus 199 ~l~~~~~--~~~~l~~~~~~L 217 (359)
.+++..+ ...+++++.+++
T Consensus 119 p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 119 PFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CC-------CHHHHHHHHHHE
T ss_pred CchhccCchhHHHHHHHHHhc
Confidence 9988864 357899999988
No 215
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.45 E-value=2.5e-13 Score=125.95 Aligned_cols=107 Identities=11% Similarity=0.067 Sum_probs=86.4
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCC-C-C--CCCccceEE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS-LCEVVCGNFLKM-P-F--EDNHFDGAY 195 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~-~-~--~~~~fD~v~ 195 (359)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.|+++++..++.+ +++++++|+.+. + . ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5678999999999999999998533499999999999999999999988866 899999998763 2 1 245899999
Q ss_pred ecccc-----cccC----CHHHHHHHHHhccCCCCEEEEEE
Q 018194 196 SIEAT-----CHAP----KLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 196 ~~~~l-----~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+.-.. .+.. +...++..+.++|+|||.+++..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 85433 1222 35567888899999999998854
No 216
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.45 E-value=2.2e-13 Score=128.17 Aligned_cols=113 Identities=19% Similarity=0.206 Sum_probs=91.5
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCC
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FEDN 189 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~ 189 (359)
.+...+...++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.++++++..|+. +.++++|+.+++ ...+
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~ 169 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGT 169 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCS
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccc
Confidence 34556678899999999999999999999752 369999999999999999999999876 899999987765 2457
Q ss_pred ccceEEecc------cccccCC----------------HHHHHHHHHhccCCCCEEEEEE
Q 018194 190 HFDGAYSIE------ATCHAPK----------------LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 190 ~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+||+|++.- ++.+.++ ...+|+++.++|||||+++...
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 899999621 2222222 2679999999999999999764
No 217
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.45 E-value=2.5e-12 Score=121.16 Aligned_cols=132 Identities=23% Similarity=0.334 Sum_probs=100.6
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc
Q 018194 89 GQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA 168 (359)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 168 (359)
+-.+.+.+...........+.+.+.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~ 331 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLN 331 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHc
Confidence 3444555543333335556677777888888888899999999999999999987 679999999999999999999888
Q ss_pred CCCCCeEEEEcCCCC----CCCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 169 GLDSLCEVVCGNFLK----MPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 169 ~~~~~i~~~~~d~~~----~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
++. +++|+++|+.+ +++++++||+|++.-.-.. ...+++.+.+ ++|++.+++.
T Consensus 332 ~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g---~~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 332 GLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAG---AAGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp TCC-SEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTC---CHHHHHHHHH-HCCSEEEEEE
T ss_pred CCC-ceEEEECCHHHHhhhhhhhcCCCCEEEECCCCcc---HHHHHHHHHh-cCCCeEEEEE
Confidence 875 89999999987 2345678999998643222 2345555554 7898888763
No 218
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.45 E-value=8.9e-13 Score=125.14 Aligned_cols=114 Identities=16% Similarity=0.205 Sum_probs=91.5
Q ss_pred HHhcCCC--CCCEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCC
Q 018194 115 VDLIDVK--AGDRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF-EDN 189 (359)
Q Consensus 115 ~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~ 189 (359)
...+... ++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.++++++..|+. ++.++++|+.+++. ..+
T Consensus 108 ~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 108 VAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp HHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTT
T ss_pred HHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccc
Confidence 3455566 89999999999999999999853 379999999999999999999998875 79999999988653 457
Q ss_pred ccceEEec------ccccccCC----------------HHHHHHHHHhccCCCCEEEEEEee
Q 018194 190 HFDGAYSI------EATCHAPK----------------LEDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 190 ~fD~v~~~------~~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
+||+|++. .++.+.++ ...+|+++.++|||||++++....
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 89999973 12222222 247899999999999999986543
No 219
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.44 E-value=2.4e-13 Score=123.28 Aligned_cols=107 Identities=20% Similarity=0.337 Sum_probs=85.3
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC--CCCCCccce
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKA--GL-DSLCEVVCGNFLKM--PFEDNHFDG 193 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~--~~~~~~fD~ 193 (359)
...+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++... ++ .++++++++|+.+. ..++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 4556899999999999999999863 579999999999999999987652 33 35799999998763 234578999
Q ss_pred EEecccccc--cCC--HHHHHHHHHhccCCCCEEEEE
Q 018194 194 AYSIEATCH--APK--LEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 194 v~~~~~l~~--~~~--~~~~l~~~~~~LkpgG~l~~~ 226 (359)
|++...... ..+ ...+++++.++|+|||++++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998654211 111 478999999999999999984
No 220
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.44 E-value=4.9e-13 Score=124.72 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=88.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCCC----CCCccceEE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGL-DSLCEVVCGNFLKMPF----EDNHFDGAY 195 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~~----~~~~fD~v~ 195 (359)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.|++++...++ .++++++++|+.+... ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999999986445999999999999999999998887 5589999999977421 146899999
Q ss_pred ecccc---------cccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 196 SIEAT---------CHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 196 ~~~~l---------~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+.-.. ....+...++.++.++|+|||.+++..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 96422 223467889999999999999998864
No 221
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=2.9e-13 Score=120.87 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=84.2
Q ss_pred CCEEEEECCCCChHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEeccc
Q 018194 123 GDRILDVGCGVGGPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--PFEDNHFDGAYSIEA 199 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~v~~~~~ 199 (359)
..+|||||||+|.+++.+++ +++.+|+++|+++.+++.|++++.... .++++++++|+.+. .+++++||+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 34999999999999999998 578899999999999999999875322 35899999998764 244679999998643
Q ss_pred cccc-C---CHHHHHHHHHhccCCCCEEEEEE
Q 018194 200 TCHA-P---KLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 200 l~~~-~---~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.... + ...+++++++++|+|||++++..
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 3221 1 13689999999999999998854
No 222
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.43 E-value=7.3e-13 Score=110.73 Aligned_cols=97 Identities=15% Similarity=0.225 Sum_probs=75.2
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC--------C---
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF--------E--- 187 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------~--- 187 (359)
-+.++.+|||+|||+|.++..+++. +.+|+|+|+++.. . .++++++++|+.+.+. .
T Consensus 22 ~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 22 VVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------E-IAGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp CSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------C-CTTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------c-CCCeEEEEccccCHHHHHHHHHHhhccc
Confidence 3568899999999999999999987 7899999999752 1 2479999999988642 1
Q ss_pred CCccceEEecccccccC-----------CHHHHHHHHHhccCCCCEEEEEEe
Q 018194 188 DNHFDGAYSIEATCHAP-----------KLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~-----------~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
.++||+|++........ ....+++.+.++|||||.+++..+
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 14899999975432211 135788999999999999997543
No 223
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.43 E-value=3.9e-13 Score=126.29 Aligned_cols=141 Identities=13% Similarity=0.127 Sum_probs=105.3
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FED 188 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~ 188 (359)
..+...+...++.+|||+|||+|..+..+++. ...+|+++|+|+.+++.++++++..|+. ++.++++|+.+++ ..+
T Consensus 95 ~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~ 173 (456)
T 3m4x_A 95 MIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFS 173 (456)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhcc
Confidence 34455667889999999999999999999985 2369999999999999999999999885 7999999987754 235
Q ss_pred CccceEEeccc------ccccCC----------------HHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHh
Q 018194 189 NHFDGAYSIEA------TCHAPK----------------LEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQ 246 (359)
Q Consensus 189 ~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
++||+|++.-. +..-++ ...+|.++.++|||||+++........ .
T Consensus 174 ~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~---e---------- 240 (456)
T 3m4x_A 174 GFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP---E---------- 240 (456)
T ss_dssp TCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG---G----------
T ss_pred ccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc---c----------
Confidence 78999997432 111111 237899999999999999876433221 0
Q ss_pred hhhcCCCCCCCCCHHHHHHHHHhCCCeEEEE
Q 018194 247 GIERGDALPGLRSYAEITEIAKRVGFEVVKE 277 (359)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~ 277 (359)
.....+...|++.||+++..
T Consensus 241 -----------Ene~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 241 -----------ENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp -----------GTHHHHHHHHHHSSEEEECC
T ss_pred -----------cCHHHHHHHHHhCCCEEEec
Confidence 12345667778888766544
No 224
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.43 E-value=5.2e-14 Score=124.29 Aligned_cols=109 Identities=15% Similarity=0.061 Sum_probs=79.2
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEE--EcCCCCCCCCCCc
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNK-KAGLDSLCEVV--CGNFLKMPFEDNH 190 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~~~~~i~~~--~~d~~~~~~~~~~ 190 (359)
+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..+++... ......++.++ ++|+.+++ +++
T Consensus 74 i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~ 148 (276)
T 2wa2_A 74 IDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQ 148 (276)
T ss_dssp HHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCC
T ss_pred HHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCC
Confidence 334445668899999999999999999987 6999999998 5433221100 00111268999 99998865 679
Q ss_pred cceEEecccccccCCH----H---HHHHHHHhccCCCC--EEEEEEe
Q 018194 191 FDGAYSIEATCHAPKL----E---DVYAEVFRVLKPGS--LYVSYEW 228 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~----~---~~l~~~~~~LkpgG--~l~~~~~ 228 (359)
||+|++..+ ++..++ . .+|+++.++||||| .+++..+
T Consensus 149 fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 149 ADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred cCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 999999877 444332 1 47899999999999 8887443
No 225
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.42 E-value=6.8e-13 Score=111.27 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=76.1
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcC----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCCC--
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSR----------ANVVGITINEYQVNRARLHNKKAGLDSLCEVV-CGNFLKMP-- 185 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~-- 185 (359)
.+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+ .+ .++++. .+|+.+.+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTS 86 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHH
Confidence 356789999999999999999998633 799999999842 11 368899 99987643
Q ss_pred ------CCCCccceEEecccccc----cCCH-------HHHHHHHHhccCCCCEEEEEEe
Q 018194 186 ------FEDNHFDGAYSIEATCH----APKL-------EDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 186 ------~~~~~fD~v~~~~~l~~----~~~~-------~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
+++++||+|++..+++. ..+. ..+++++.++|||||++++..+
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 34568999999765443 2233 4889999999999999998654
No 226
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.42 E-value=6.1e-14 Score=123.15 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=78.0
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEE--EcCCCCCCCCCCccc
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNK-KAGLDSLCEVV--CGNFLKMPFEDNHFD 192 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~~~~~i~~~--~~d~~~~~~~~~~fD 192 (359)
+...+.++.+|||||||+|.++..+++. .+|+|+|+++ |+..+++... ......++.++ ++|+.+++ +++||
T Consensus 68 ~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 68 ERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp HHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred HcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCc
Confidence 3345678899999999999999999987 6999999998 5332211100 00011168999 99998865 67999
Q ss_pred eEEecccccccCCH----H---HHHHHHHhccCCCC--EEEEEEe
Q 018194 193 GAYSIEATCHAPKL----E---DVYAEVFRVLKPGS--LYVSYEW 228 (359)
Q Consensus 193 ~v~~~~~l~~~~~~----~---~~l~~~~~~LkpgG--~l~~~~~ 228 (359)
+|+|..+ ++..++ . .+|..+.++||||| .+++-.+
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 9999877 544332 1 37899999999999 8887443
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.42 E-value=2e-13 Score=122.38 Aligned_cols=108 Identities=21% Similarity=0.257 Sum_probs=83.8
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCC-CCCCCCccceE
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKK--AGL-DSLCEVVCGNFLK-MPFEDNHFDGA 194 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~-~~~~~~~fD~v 194 (359)
...+.+|||||||+|..+..++++ +..+|+++|+|+.+++.|++++.. .++ .++++++.+|+.+ ++..+++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 345689999999999999999986 347999999999999999998765 233 4689999999876 23345789999
Q ss_pred EecccccccC----CHHHHHHHHHhccCCCCEEEEEE
Q 018194 195 YSIEATCHAP----KLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 195 ~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
++.......+ ....+++++.++|+|||++++..
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 9865432221 13578999999999999999853
No 228
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=4.7e-13 Score=118.43 Aligned_cols=105 Identities=20% Similarity=0.287 Sum_probs=84.3
Q ss_pred CCCEEEEECCCCChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC-CCCCCccceEEe
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKA--GL-DSLCEVVCGNFLKM-PFEDNHFDGAYS 196 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~fD~v~~ 196 (359)
.+.+|||||||+|.+++.++++. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. +...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 56799999999999999999873 479999999999999999987542 23 35899999998763 334578999999
Q ss_pred cccccccCC----HHHHHHHHHhccCCCCEEEEE
Q 018194 197 IEATCHAPK----LEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 197 ~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.......+. ..++++++.++|||||.+++.
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 654322221 368999999999999999874
No 229
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.41 E-value=1.1e-12 Score=123.43 Aligned_cols=115 Identities=21% Similarity=0.301 Sum_probs=94.2
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FED 188 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~ 188 (359)
..+...+...++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.++++....++ +++++++|+.+.+ +++
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~ 313 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGE 313 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTT
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhccc
Confidence 445556678899999999999999999999853 37999999999999999999998876 3799999998875 556
Q ss_pred CccceEEec------ccccccCCH----------------HHHHHHHHhccCCCCEEEEEEe
Q 018194 189 NHFDGAYSI------EATCHAPKL----------------EDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 189 ~~fD~v~~~------~~l~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
++||+|++. .++.+.++. ..+++++.++|||||++++.+.
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 789999963 233444442 4789999999999999998653
No 230
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.40 E-value=3.2e-13 Score=121.81 Aligned_cols=106 Identities=22% Similarity=0.257 Sum_probs=85.8
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHH--cC-C-CCCeEEEEcCCCCC-CCCCCccceE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKK--AG-L-DSLCEVVCGNFLKM-PFEDNHFDGA 194 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~--~~-~-~~~i~~~~~d~~~~-~~~~~~fD~v 194 (359)
.++.+|||||||+|.++..++++ +..+|+++|+|+.+++.|++++.. .+ + .++++++.+|+.+. +..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 35689999999999999999986 457999999999999999998764 22 2 35899999998763 3346789999
Q ss_pred Eecccccc---cC--C--HHHHHHHHHhccCCCCEEEEE
Q 018194 195 YSIEATCH---AP--K--LEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 195 ~~~~~l~~---~~--~--~~~~l~~~~~~LkpgG~l~~~ 226 (359)
++....+. -+ . ...+++++.++|||||.+++.
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 99765543 11 1 478999999999999999985
No 231
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.40 E-value=1.9e-13 Score=122.98 Aligned_cols=106 Identities=24% Similarity=0.347 Sum_probs=81.3
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC-CCCCCccceEE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKA--GL-DSLCEVVCGNFLKM-PFEDNHFDGAY 195 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~fD~v~ 195 (359)
..+.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+. +..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 34579999999999999999986 4579999999999999999987643 33 46899999998763 33457899999
Q ss_pred ecccccccCC--H--HHHHHHHHhccCCCCEEEEE
Q 018194 196 SIEATCHAPK--L--EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 196 ~~~~l~~~~~--~--~~~l~~~~~~LkpgG~l~~~ 226 (359)
+...-+..+. . ..+++++.++|+|||++++.
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 8653222121 1 68999999999999999984
No 232
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.39 E-value=4.5e-13 Score=119.84 Aligned_cols=105 Identities=23% Similarity=0.307 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCccceEEe
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKK--AGL-DSLCEVVCGNFLKM-PFEDNHFDGAYS 196 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~fD~v~~ 196 (359)
.+.+|||||||+|..+..+++. +..+|+++|+|+.+++.+++++.. .++ .++++++.+|+.+. +...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999986 457999999999999999998754 223 35899999998662 334578999998
Q ss_pred cccccccC-----CHHHHHHHHHhccCCCCEEEEE
Q 018194 197 IEATCHAP-----KLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 197 ~~~l~~~~-----~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
...-.+.. ....+++++.++|||||++++.
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 54321011 2378999999999999999984
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=1.7e-12 Score=120.17 Aligned_cols=144 Identities=19% Similarity=0.193 Sum_probs=101.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEeccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-FEDNHFDGAYSIEA 199 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~v~~~~~ 199 (359)
.+|.+|||+|||+|.++..+++. ++.|+++|+|+.+++.++++++..++.. .+.++|+.+.. ...+.||+|++.-.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEECCC
Confidence 36899999999999999999986 6779999999999999999999888763 56689987642 11344999998643
Q ss_pred ccc---------cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhC
Q 018194 200 TCH---------APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRV 270 (359)
Q Consensus 200 l~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 270 (359)
... ..+...++..+.++|||||++++........ . ..+ ...+.+.+.++
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~-----~--~~f---------------~~~v~~a~~~~ 347 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR-----L--EDL---------------LEVARRAAADL 347 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-----H--HHH---------------HHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-----H--HHH---------------HHHHHHHHHHh
Confidence 211 1245688999999999999998754322110 0 000 13456677778
Q ss_pred CCeEEEEEecCCCCCCchh
Q 018194 271 GFEVVKEKDLAKPPAQPWW 289 (359)
Q Consensus 271 GF~~i~~~~~~~~~~~~w~ 289 (359)
|.+.........++..|+.
T Consensus 348 g~~~~i~~~~~~~~DhP~~ 366 (393)
T 4dmg_A 348 GRRLRVHRVTYQPEDHPWS 366 (393)
T ss_dssp TCCEEEEEEEECCTTSCEE
T ss_pred CCeEEEEEEcCCCCCCCcC
Confidence 8776665555544433443
No 234
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.39 E-value=3e-13 Score=122.25 Aligned_cols=106 Identities=24% Similarity=0.321 Sum_probs=83.8
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCccceEE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKK--AGL-DSLCEVVCGNFLKM-PFEDNHFDGAY 195 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~fD~v~ 195 (359)
.++.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++.. .++ .++++++++|+.+. +..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 35689999999999999999986 457999999999999999998764 122 35799999998663 22357899999
Q ss_pred eccccccc--CCH--HHHHHHHHhccCCCCEEEEE
Q 018194 196 SIEATCHA--PKL--EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 196 ~~~~l~~~--~~~--~~~l~~~~~~LkpgG~l~~~ 226 (359)
+...-..- ... ..+++++.++|||||++++.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 86532111 111 78999999999999999984
No 235
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.39 E-value=8.1e-13 Score=122.62 Aligned_cols=104 Identities=22% Similarity=0.256 Sum_probs=86.6
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCccceEEec
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF----EDNHFDGAYSI 197 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD~v~~~ 197 (359)
++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++...++.+ ++++++|+.+... ..++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999987 6799999999999999999999888764 9999999977431 15689999985
Q ss_pred cccc---------ccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 198 EATC---------HAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 198 ~~l~---------~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
-... ...+...++.++.++|+|||.+++..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4221 11346789999999999999999864
No 236
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=2.5e-12 Score=117.16 Aligned_cols=101 Identities=13% Similarity=0.104 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++.+|||+|||+|.++.. ++ .+.+|+++|+|+.+++.+++++...++.++++++++|+.+.. ++||+|++....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 4788999999999999999 88 467999999999999999999999988778999999998865 789999986321
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEEeee
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSYEWVT 230 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 230 (359)
....++..+.++|+|||.+++.++..
T Consensus 269 ----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 ----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 23478899999999999999876543
No 237
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.38 E-value=3e-13 Score=120.14 Aligned_cols=104 Identities=23% Similarity=0.353 Sum_probs=82.5
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc--CC--------CCCeEEEEcCCCCC-CCCCC
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA--GL--------DSLCEVVCGNFLKM-PFEDN 189 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~--------~~~i~~~~~d~~~~-~~~~~ 189 (359)
.++.+|||||||+|.++..+++.+..+|+++|+|+.+++.|++++ .. ++ .++++++.+|+.+. +. ++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 456899999999999999999874469999999999999999987 33 22 46899999998653 22 57
Q ss_pred ccceEEecccccccC--C--HHHHHHHHHhccCCCCEEEEE
Q 018194 190 HFDGAYSIEATCHAP--K--LEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~--~--~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+||+|++....+..+ . ...+++++.++|+|||++++.
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 899999865432211 1 368899999999999999885
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.38 E-value=4.9e-13 Score=124.76 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=88.5
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCccceEEe
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF----EDNHFDGAYS 196 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD~v~~ 196 (359)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.|++++...++.++++++++|+.+... ..++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 478899999999999999999863359999999999999999999988876689999999877431 2568999999
Q ss_pred ccccc---------ccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 197 IEATC---------HAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 197 ~~~l~---------~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.-... +..+...++.++.++|+|||.+++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 335 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS 335 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 54321 12356789999999999999998864
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.37 E-value=6.5e-12 Score=107.40 Aligned_cols=141 Identities=9% Similarity=0.097 Sum_probs=103.5
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
.+...+ .+..+|||||||+|-++..++.. +..+|+++|+++.+++.+++++...|+. .++.+.|...-+ +.+.|
T Consensus 125 ~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~-p~~~~ 199 (281)
T 3lcv_B 125 ELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR-LDEPA 199 (281)
T ss_dssp HHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC-CCSCC
T ss_pred HHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC-CCCCc
Confidence 344444 34679999999999999988874 6789999999999999999999988865 788999987754 56889
Q ss_pred ceEEecccccccCCH--HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHh
Q 018194 192 DGAYSIEATCHAPKL--EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKR 269 (359)
Q Consensus 192 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (359)
|++++.-+++|+++. ...+ ++...|+|+|.++-.+. .........+.... ...|.+.+.+
T Consensus 200 DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~---ksl~Grs~gm~~~Y--------------~~~~e~~~~~ 261 (281)
T 3lcv_B 200 DVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT---KSLGQRSKGMFQNY--------------SQSFESQARE 261 (281)
T ss_dssp SEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC---C-------CHHHHH--------------HHHHHHHHHH
T ss_pred chHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc---hhhcCCCcchhhHH--------------HHHHHHHHHh
Confidence 999999999999753 2455 89999999999986542 11111222222211 2467778888
Q ss_pred CCCeEEE
Q 018194 270 VGFEVVK 276 (359)
Q Consensus 270 aGF~~i~ 276 (359)
.|..+.+
T Consensus 262 ~g~~~~~ 268 (281)
T 3lcv_B 262 RSCRIQR 268 (281)
T ss_dssp HTCCEEE
T ss_pred cCCceee
Confidence 8885433
No 240
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.37 E-value=7.7e-13 Score=117.57 Aligned_cols=107 Identities=23% Similarity=0.317 Sum_probs=84.8
Q ss_pred CCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcC--C-CCCeEEEEcCCCCC-CCCCCccceE
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAG--L-DSLCEVVCGNFLKM-PFEDNHFDGA 194 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~--~-~~~i~~~~~d~~~~-~~~~~~fD~v 194 (359)
..++.+|||||||+|.++..+++. +..+|+++|+++.+++.+++++...+ + .++++++.+|+.+. +...++||+|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 345689999999999999999986 35799999999999999999875431 1 35799999998763 2235789999
Q ss_pred EecccccccC--CH--HHHHHHHHhccCCCCEEEEE
Q 018194 195 YSIEATCHAP--KL--EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 195 ~~~~~l~~~~--~~--~~~l~~~~~~LkpgG~l~~~ 226 (359)
++.....+.+ .. ..+++++.++|+|||.+++.
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9965433222 22 68999999999999999974
No 241
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.36 E-value=4.3e-12 Score=113.63 Aligned_cols=89 Identities=20% Similarity=0.274 Sum_probs=71.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.++..+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++ ++++++++|+.+.++
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-- 104 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-- 104 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--
Confidence 34566777778888999999999999999999986 57999999999999999999877665 579999999988765
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
.+||+|+++...+
T Consensus 105 ~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 105 PKFDVCTANIPYK 117 (299)
T ss_dssp CCCSEEEEECCGG
T ss_pred ccCCEEEEcCCcc
Confidence 4899999975543
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.36 E-value=1.6e-12 Score=129.13 Aligned_cols=105 Identities=11% Similarity=0.114 Sum_probs=88.3
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCC-CCCCCccceEEeccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLD-SLCEVVCGNFLKM-PFEDNHFDGAYSIEA 199 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~-~~~~~~fD~v~~~~~ 199 (359)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.++++++..++. .+++++++|+.+. +...++||+|++.-.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 58899999999999999998853347999999999999999999999886 5899999999873 334578999998542
Q ss_pred -----------ccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 200 -----------TCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 200 -----------l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+....+...++..+.++|+|||++++.
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s 656 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 656 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 233346778999999999999999974
No 243
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.36 E-value=7.3e-12 Score=114.57 Aligned_cols=106 Identities=15% Similarity=0.134 Sum_probs=87.4
Q ss_pred CCCCCCEEEEECCCCChHHHHHHhhcC------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccc
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIAAHSR------ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFD 192 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 192 (359)
...++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.+....++ ++.+.++|+... .+.++||
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~-~~~~~fD 203 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLAN-LLVDPVD 203 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSC-CCCCCEE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCc-cccCCcc
Confidence 445678999999999999998887532 6899999999999999999887776 589999998763 3457899
Q ss_pred eEEecccccccCCH------------------HHHHHHHHhccCCCCEEEEEE
Q 018194 193 GAYSIEATCHAPKL------------------EDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 193 ~v~~~~~l~~~~~~------------------~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+++-.+.++++. ..++.++.+.|||||+++++.
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99999887665432 258999999999999998864
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.35 E-value=6.7e-13 Score=116.36 Aligned_cols=97 Identities=9% Similarity=-0.067 Sum_probs=81.0
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCCCCCCCccceEEec
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA--GL-DSLCEVVCGNFLKMPFEDNHFDGAYSI 197 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~~~~~~fD~v~~~ 197 (359)
..+.+|||||||+|..++.+++++ .+|+++|+++.+++.|++++... ++ .++++++.+|+.+.. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 356799999999999999999884 89999999999999998765321 11 357999999998754 789999986
Q ss_pred ccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 198 EATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 198 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.+++..+++++.++|||||.+++.
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEE
Confidence 346667999999999999999884
No 245
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.34 E-value=2.6e-12 Score=113.70 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=86.6
Q ss_pred hcCCCCCCEEEEECCCC------ChHHHHHHhh-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEE-EEcCCCCCCCC
Q 018194 117 LIDVKAGDRILDVGCGV------GGPMRAIAAH-S-RANVVGITINEYQVNRARLHNKKAGLDSLCEV-VCGNFLKMPFE 187 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~------G~~~~~l~~~-~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~-~~~d~~~~~~~ 187 (359)
.+.++++.+|||+|||+ |. ..+++. + +.+|+|+|+|+. + .++++ +++|+.+++++
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------------~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------------SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------------CSSSEEEESCGGGCCCS
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------------CCCEEEEECccccCCcc
Confidence 45678899999999955 55 444443 2 479999999987 1 25889 99999987654
Q ss_pred CCccceEEecccccc-----------cCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCC
Q 018194 188 DNHFDGAYSIEATCH-----------APKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPG 256 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (359)
++||+|+++...+. ......+++++.++|||||++++..+...
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~------------------------- 175 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS------------------------- 175 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS-------------------------
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC-------------------------
Confidence 68999999754221 11245899999999999999998532211
Q ss_pred CCCHHHHHHHHHhCCCeEEEEE
Q 018194 257 LRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 257 ~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
...++.++|++.||..++..
T Consensus 176 --~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 --WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp --CCHHHHHHHTTEEEEEEEEE
T ss_pred --CHHHHHHHHHHcCCcEEEEE
Confidence 12477888999999877664
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.34 E-value=9.4e-12 Score=105.42 Aligned_cols=102 Identities=16% Similarity=0.114 Sum_probs=85.0
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.++.+|||||||+|.++..+. ++.+|+++|+|+.+++.+++.....+ .+..+..+|....+++ ++||+|++.-++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~~-~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPPA-EAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCCC-CBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCCC-CCcchHHHHHHH
Confidence 567799999999999999887 67899999999999999999988776 3579999999887655 589999999999
Q ss_pred cccCC-HHHHHHHHHhccCCCCEEEEEE
Q 018194 201 CHAPK-LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 201 ~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+.+ .....-++...|+++|.++-..
T Consensus 179 h~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 98863 2233338888999998887643
No 247
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.32 E-value=3.7e-10 Score=103.22 Aligned_cols=211 Identities=14% Similarity=0.037 Sum_probs=119.5
Q ss_pred CCEEEEECCCCChHHHHHHh--------h--------cCCEEEEEeCCHHHHHHHHHHHHHcC-----------C--CC-
Q 018194 123 GDRILDVGCGVGGPMRAIAA--------H--------SRANVVGITINEYQVNRARLHNKKAG-----------L--DS- 172 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~--------~--------~~~~v~g~D~s~~~~~~a~~~~~~~~-----------~--~~- 172 (359)
..+|+|+|||+|..+..+.. . +..+|...|+..+.....=+...... . ++
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57999999999998877621 1 35688888987665443322222110 0 00
Q ss_pred CeEEEEcCCCCCCCCCCccceEEecccccccC--------------------------------------CHHHHHHHHH
Q 018194 173 LCEVVCGNFLKMPFEDNHFDGAYSIEATCHAP--------------------------------------KLEDVYAEVF 214 (359)
Q Consensus 173 ~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~ 214 (359)
-+.-+.+.+..-.+|+++||+|+++.+|||+. |+..+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223344444458899999999999999986 3445788999
Q ss_pred hccCCCCEEEEEEeeeCcccccCch--------HHHHHHhhhhc----------CCCCC-CCCCHHHHHHHHH-hCCCeE
Q 018194 215 RVLKPGSLYVSYEWVTTDKYEAENK--------EHVDIIQGIER----------GDALP-GLRSYAEITEIAK-RVGFEV 274 (359)
Q Consensus 215 ~~LkpgG~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~----------~~~~~-~~~~~~~~~~~l~-~aGF~~ 274 (359)
+.|+|||++++.-....+....... .....+..+.. ....| .+.+.+++.++++ +.||++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 9999999999976555432111100 11111211111 11223 3578999999998 599999
Q ss_pred EEEEecCCCCCCchhhhh-hccchhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHH
Q 018194 275 VKEKDLAKPPAQPWWTRL-KMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLT 334 (359)
Q Consensus 275 i~~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 334 (359)
...+.+..+. .++.... .....++.+...+..+.+.+-....+..-+.++..+..+.+.
T Consensus 293 ~~le~~~~~~-~~~~~~~~~~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~ 352 (374)
T 3b5i_A 293 DKLVVYKGGS-PLVVNEPDDASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRAT 352 (374)
T ss_dssp EEEEEEECCC-CCCCSSTTCHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecC-CccccccchhHHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHH
Confidence 8877664321 1111110 112233334344444455554444454444444444444443
No 248
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.31 E-value=1.2e-12 Score=113.75 Aligned_cols=84 Identities=14% Similarity=0.221 Sum_probs=69.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.++..+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... .++++++++|+.++++++
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVD---HDNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTT---CCSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhcc---CCCeEEEEChHHhCCccc
Confidence 45566778888888999999999999999999987 47999999999999999988753 247999999999988764
Q ss_pred -CccceEEec
Q 018194 189 -NHFDGAYSI 197 (359)
Q Consensus 189 -~~fD~v~~~ 197 (359)
..| .|+++
T Consensus 93 ~~~~-~vv~n 101 (244)
T 1qam_A 93 NQSY-KIFGN 101 (244)
T ss_dssp SCCC-EEEEE
T ss_pred CCCe-EEEEe
Confidence 345 34444
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.30 E-value=4.6e-11 Score=111.86 Aligned_cols=127 Identities=18% Similarity=0.176 Sum_probs=92.1
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc
Q 018194 89 GQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA 168 (359)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 168 (359)
+-.+.+.+...........+.+.+.+.. +.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...
T Consensus 260 g~~f~~~~~~F~q~n~~~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~n 335 (425)
T 2jjq_A 260 DVDYLIHPNSFFQTNSYQAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEIN 335 (425)
T ss_dssp TEEEEECTTSCCCSBHHHHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CEEEEEccccccccCHHHHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHc
Confidence 3344444433333223444445555555 456789999999999999999986 579999999999999999999888
Q ss_pred CCCCCeEEEEcCCCCCCCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 169 GLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 169 ~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
++. ++|+.+|+.+... .+||+|++.-.-... ...+++.+. .|+|||.+++.
T Consensus 336 gl~--v~~~~~d~~~~~~--~~fD~Vv~dPPr~g~--~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 336 NVD--AEFEVASDREVSV--KGFDTVIVDPPRAGL--HPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp TCC--EEEEECCTTTCCC--TTCSEEEECCCTTCS--CHHHHHHHH-HHCCSEEEEEE
T ss_pred CCc--EEEEECChHHcCc--cCCCEEEEcCCccch--HHHHHHHHH-hcCCCcEEEEE
Confidence 875 9999999988642 289999986542211 234556554 49999998874
No 250
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.29 E-value=1.4e-12 Score=116.77 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=75.1
Q ss_pred cCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeC----CHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCCCCCCCccc
Q 018194 118 IDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITI----NEYQVNRARLHNKKAGLDSLCEVVCG-NFLKMPFEDNHFD 192 (359)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~----s~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~fD 192 (359)
..+.++.+|||||||+|.++..+++. .+|+|+|+ ++.+++... ....+ .+++.++++ |+..++ .++||
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--cCCCC
Confidence 34567899999999999999999987 58999999 565442211 01111 146899999 888764 56899
Q ss_pred eEEeccccc---ccCCHH---HHHHHHHhccCCCCEEEEEE
Q 018194 193 GAYSIEATC---HAPKLE---DVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 193 ~v~~~~~l~---~~~~~~---~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+|..+.. +..+.. .+|..+.++|||||.+++..
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 999977653 222322 57899999999999888743
No 251
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.29 E-value=4.8e-11 Score=109.12 Aligned_cols=155 Identities=11% Similarity=0.025 Sum_probs=98.1
Q ss_pred CCEEEEECCCCChHHHHHHhh------------------cCCEEEEEeCC-----------HHHHHHHHHHHHHcCCCCC
Q 018194 123 GDRILDVGCGVGGPMRAIAAH------------------SRANVVGITIN-----------EYQVNRARLHNKKAGLDSL 173 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~------------------~~~~v~g~D~s-----------~~~~~~a~~~~~~~~~~~~ 173 (359)
..+|+|+||++|..+..+... +..+|+..|+. +.+.+..++. .+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 579999999999988766543 34688889986 4444433221 121112
Q ss_pred eEEEEcCCCC---CCCCCCccceEEecccccccCCHH---------------------------------------HHHH
Q 018194 174 CEVVCGNFLK---MPFEDNHFDGAYSIEATCHAPKLE---------------------------------------DVYA 211 (359)
Q Consensus 174 i~~~~~d~~~---~~~~~~~fD~v~~~~~l~~~~~~~---------------------------------------~~l~ 211 (359)
--|+.+.... -.||++++|+|+++.+|||+.+.. .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566555444 458899999999999999985432 1266
Q ss_pred HHHhccCCCCEEEEEEeeeCccc-ccCch-HHHHHHhhh----------hcCCCCC-CCCCHHHHHHHHHhCC-CeEEEE
Q 018194 212 EVFRVLKPGSLYVSYEWVTTDKY-EAENK-EHVDIIQGI----------ERGDALP-GLRSYAEITEIAKRVG-FEVVKE 277 (359)
Q Consensus 212 ~~~~~LkpgG~l~~~~~~~~~~~-~~~~~-~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~l~~aG-F~~i~~ 277 (359)
..++.|+|||++++.-....... .+... .....+..+ ......| .+.+.++++++++++| |++...
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 66899999999999765544321 11100 222222211 1112223 4578999999999984 898887
Q ss_pred Eec
Q 018194 278 KDL 280 (359)
Q Consensus 278 ~~~ 280 (359)
+.+
T Consensus 290 e~~ 292 (384)
T 2efj_A 290 ETF 292 (384)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.28 E-value=2.3e-11 Score=108.02 Aligned_cols=89 Identities=19% Similarity=0.218 Sum_probs=77.3
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
....+.+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+|+.+++.+++++.. .++++++++|+.+++++
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~---~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL---YNNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH---CSSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc---CCCeEEEECchhhCCcc
Confidence 345677888888889999999999999999999997 57999999999999999998873 24799999999998888
Q ss_pred CCccceEEecccc
Q 018194 188 DNHFDGAYSIEAT 200 (359)
Q Consensus 188 ~~~fD~v~~~~~l 200 (359)
+.+||.|+++...
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 7789999987544
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.27 E-value=1.3e-11 Score=114.32 Aligned_cols=118 Identities=17% Similarity=0.122 Sum_probs=94.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cC--------------------------------------CEE
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SR--------------------------------------ANV 148 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~--------------------------------------~~v 148 (359)
+.+...++......++..|||++||+|.++.+.+.. .+ .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 445566777888888999999999999999888763 11 469
Q ss_pred EEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccc-c---CCHHHHHHHHHhccCC--CCE
Q 018194 149 VGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCH-A---PKLEDVYAEVFRVLKP--GSL 222 (359)
Q Consensus 149 ~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~---~~~~~~l~~~~~~Lkp--gG~ 222 (359)
+|+|+|+.+++.|++++...++.+++++.++|+.+++.+ .+||+|+++-.... + .+...+++.+.+.||+ ||.
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 999999999999999999999888899999999998754 58999999854321 1 2355667777777766 888
Q ss_pred EEEE
Q 018194 223 YVSY 226 (359)
Q Consensus 223 l~~~ 226 (359)
++++
T Consensus 346 ~~ii 349 (393)
T 3k0b_A 346 VYVL 349 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.26 E-value=3.8e-11 Score=113.56 Aligned_cols=117 Identities=18% Similarity=0.226 Sum_probs=94.1
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--------------cCCEEEEEeCCHHHHHHHHHHHHHcCCCC-Ce
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--------------SRANVVGITINEYQVNRARLHNKKAGLDS-LC 174 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--------------~~~~v~g~D~s~~~~~~a~~~~~~~~~~~-~i 174 (359)
..+.+++.+...++.+|||+|||+|.++..+++. ...+++|+|+++.+++.|+.+....++.. ++
T Consensus 159 v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~ 238 (445)
T 2okc_A 159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRS 238 (445)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCC
Confidence 4556666777778889999999999999888764 24689999999999999999888777643 57
Q ss_pred EEEEcCCCCCCCCCCccceEEecccccccCC-----------------HHHHHHHHHhccCCCCEEEEEE
Q 018194 175 EVVCGNFLKMPFEDNHFDGAYSIEATCHAPK-----------------LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 175 ~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+.++|....+.. .+||+|+++-.+.+... ...+++.+.++|||||+++++.
T Consensus 239 ~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 239 PIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp SEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 8999999876543 48999999876654321 1478999999999999998864
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.26 E-value=3.3e-11 Score=111.14 Aligned_cols=118 Identities=14% Similarity=0.108 Sum_probs=95.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cC--------------------------------------CEE
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SR--------------------------------------ANV 148 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~--------------------------------------~~v 148 (359)
+.+...++......++..|||.+||+|.++.+.+.. .+ .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 445566777778888999999999999999888753 11 469
Q ss_pred EEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccc-c---CCHHHHHHHHHhccCC--CCE
Q 018194 149 VGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCH-A---PKLEDVYAEVFRVLKP--GSL 222 (359)
Q Consensus 149 ~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~---~~~~~~l~~~~~~Lkp--gG~ 222 (359)
+|+|+|+.+++.|++++...|+.+++++.++|+.+++.+ .+||+|+++-.... + .+...+++++.+.||+ ||.
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 999999999999999999999988899999999998754 58999999854331 2 2456777777777776 888
Q ss_pred EEEE
Q 018194 223 YVSY 226 (359)
Q Consensus 223 l~~~ 226 (359)
++++
T Consensus 339 ~~ii 342 (384)
T 3ldg_A 339 QFIL 342 (384)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.26 E-value=1.7e-11 Score=113.35 Aligned_cols=118 Identities=20% Similarity=0.236 Sum_probs=95.5
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc-C--------------------------------------CEE
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS-R--------------------------------------ANV 148 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--------------------------------------~~v 148 (359)
+.+...++......++.+|||++||+|.++..++... + .+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 3455667777888889999999999999998887631 1 579
Q ss_pred EEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccccc-c---CCHHHHHHHHHhccCC--CCE
Q 018194 149 VGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCH-A---PKLEDVYAEVFRVLKP--GSL 222 (359)
Q Consensus 149 ~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~---~~~~~~l~~~~~~Lkp--gG~ 222 (359)
+|+|+|+.+++.|++++...++.+++++.++|+.+++.+ .+||+|+++-.... + .+...+++++.+.||+ |+.
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 999999999999999999999877899999999998754 58999999766432 1 2456777888778877 888
Q ss_pred EEEE
Q 018194 223 YVSY 226 (359)
Q Consensus 223 l~~~ 226 (359)
+.+.
T Consensus 340 ~~ii 343 (385)
T 3ldu_A 340 YYLI 343 (385)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8775
No 257
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.24 E-value=1.1e-13 Score=120.49 Aligned_cols=111 Identities=14% Similarity=0.167 Sum_probs=85.5
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-C
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED-N 189 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~ 189 (359)
.+.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..++++++++|+.+++++. +
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~~ 93 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNKQ 93 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCSS
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccCC
Confidence 456777788888999999999999999999987 4899999999999998887654 2357999999999988763 6
Q ss_pred ccceEEecccc-----------cccCCHHHHH----HHHHhccCCCCEEEEE
Q 018194 190 HFDGAYSIEAT-----------CHAPKLEDVY----AEVFRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~~l-----------~~~~~~~~~l----~~~~~~LkpgG~l~~~ 226 (359)
+| .|+++... .|..+...++ +.+.++|+|||.+.+.
T Consensus 94 ~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 94 RY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp EE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred Cc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 78 66665321 1222333344 6689999999988763
No 258
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.19 E-value=7.3e-11 Score=108.86 Aligned_cols=126 Identities=11% Similarity=0.091 Sum_probs=93.1
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC
Q 018194 93 HFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS 172 (359)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~ 172 (359)
.+.+...........+.+...+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++..++ .
T Consensus 185 ~~~~~~F~Q~n~~~~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~ 261 (369)
T 3bt7_A 185 RQVENSFTQPNAAMNIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-D 261 (369)
T ss_dssp EEETTSCCCSBHHHHHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-C
T ss_pred EECCCCeecCCHHHHHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-C
Confidence 34444333344455566677777777654 578999999999999999985 46999999999999999999998887 4
Q ss_pred CeEEEEcCCCCCC--CCC--------------CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 173 LCEVVCGNFLKMP--FED--------------NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 173 ~i~~~~~d~~~~~--~~~--------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+++|+.+|+.+.. +.. .+||+|++.-.- ..+..++.+.|+|+|.++.+.
T Consensus 262 ~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 262 NVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp SEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEE
T ss_pred ceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEE
Confidence 8999999997642 121 379999875321 123456677778999988754
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.18 E-value=9.8e-11 Score=101.99 Aligned_cols=85 Identities=13% Similarity=0.155 Sum_probs=71.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+|+.|++.++++... .++++++++|+.++++++
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHH
Confidence 45566788888889999999999999999999986 47999999999999999998764 357999999999987643
Q ss_pred ----CccceEEecc
Q 018194 189 ----NHFDGAYSIE 198 (359)
Q Consensus 189 ----~~fD~v~~~~ 198 (359)
++|| |+++.
T Consensus 92 ~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 92 VKTDKPLR-VVGNL 104 (255)
T ss_dssp SCCSSCEE-EEEEC
T ss_pred hccCCCeE-EEecC
Confidence 4688 55543
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.18 E-value=3.4e-10 Score=101.44 Aligned_cols=112 Identities=13% Similarity=0.193 Sum_probs=84.9
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC---
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED--- 188 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~--- 188 (359)
+...+.+.++.+|||+|||+|..+..+++. ...+|+++|+++.+++.++++++..++. +++++++|+.+++...
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~ 172 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRY 172 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGG
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCcccccc
Confidence 445667889999999999999999999985 3479999999999999999999998874 7999999998765322
Q ss_pred CccceEEecc------cccccCC------------------HHHHHHHHHhccCCCCEEEEEE
Q 018194 189 NHFDGAYSIE------ATCHAPK------------------LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 189 ~~fD~v~~~~------~l~~~~~------------------~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+||.|++.- ++..-+| ..++|..+.++|+ ||+++...
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 5799999731 1211111 1246788888887 89877643
No 261
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.15 E-value=8.7e-11 Score=110.42 Aligned_cols=107 Identities=22% Similarity=0.325 Sum_probs=82.8
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
..+.+++.+...++.+|||+|||+|.++..+++. .+.+++|+|+++.+++.| .+++++++|+.+.+ +
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~-~ 95 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWE-P 95 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCC-C
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcC-c
Confidence 4455666666556779999999999999999985 457999999999998766 36899999998865 3
Q ss_pred CCccceEEecccccc----------cCC-------------------HHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCH----------APK-------------------LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~----------~~~-------------------~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.++||+|+++-.... +++ ...+++.+.++|+|||+++++.
T Consensus 96 ~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 96 GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 468999999632211 111 1266899999999999998864
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.12 E-value=1.5e-10 Score=101.63 Aligned_cols=86 Identities=19% Similarity=0.123 Sum_probs=72.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFED 188 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 188 (359)
...+.+++.+.+.++ +|||||||+|.++..+++. +.+|+++|+|+.|++.++++... .+++++++|+.++++++
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEE 107 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGG
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhh
Confidence 455677888888889 9999999999999999996 57999999999999999988752 47999999999987654
Q ss_pred C-ccceEEecccc
Q 018194 189 N-HFDGAYSIEAT 200 (359)
Q Consensus 189 ~-~fD~v~~~~~l 200 (359)
. .+|.|+++...
T Consensus 108 ~~~~~~iv~NlPy 120 (271)
T 3fut_A 108 VPQGSLLVANLPY 120 (271)
T ss_dssp SCTTEEEEEEECS
T ss_pred ccCccEEEecCcc
Confidence 2 68888887643
No 263
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.11 E-value=8.6e-11 Score=106.09 Aligned_cols=106 Identities=20% Similarity=0.262 Sum_probs=80.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcC---CC----CCeEEEEcCCCCCCC----CCC
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAG---LD----SLCEVVCGNFLKMPF----EDN 189 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~---~~----~~i~~~~~d~~~~~~----~~~ 189 (359)
..+.+||+||||+|..++++++++..+|+++|+++.+++.|++++...+ +. ++++++.+|+....- ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3568999999999999999998755799999999999999999875321 22 269999999987431 357
Q ss_pred ccceEEecccc-cc--cC---CHHHHHHHH----HhccCCCCEEEEE
Q 018194 190 HFDGAYSIEAT-CH--AP---KLEDVYAEV----FRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~~l-~~--~~---~~~~~l~~~----~~~LkpgG~l~~~ 226 (359)
+||+|++...- .. .+ --..+++.+ .++|+|||.+++.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 89999986532 11 11 224666666 8999999999874
No 264
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.08 E-value=1.2e-09 Score=99.13 Aligned_cols=159 Identities=12% Similarity=-0.015 Sum_probs=101.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh-----------------cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE---cCC
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-----------------SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVC---GNF 181 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~ 181 (359)
...+|+|+||++|..+..+... +..+|+..|+..+.....-+.........+--|+. +.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999877654322 33689999998888776655543211000123444 444
Q ss_pred CCCCCCCCccceEEecccccccCC---------------------------------HHHHHHHHHhccCCCCEEEEEEe
Q 018194 182 LKMPFEDNHFDGAYSIEATCHAPK---------------------------------LEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 182 ~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
..-.||++++|+|+++.++||+.+ +..+|+..++.|+|||++++.-.
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 445689999999999999999753 22458888999999999998765
Q ss_pred eeCcccc------cCchHHHHHHhhh-----hcC-----CCCC-CCCCHHHHHHHHHhCC-CeEEEEEec
Q 018194 229 VTTDKYE------AENKEHVDIIQGI-----ERG-----DALP-GLRSYAEITEIAKRVG-FEVVKEKDL 280 (359)
Q Consensus 229 ~~~~~~~------~~~~~~~~~~~~~-----~~~-----~~~~-~~~~~~~~~~~l~~aG-F~~i~~~~~ 280 (359)
.....-. .....+...+... ... ...| .+.+.++++++++++| |++...+.+
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 5533210 0111222222211 111 1122 3668899999999996 577665544
No 265
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.07 E-value=1.7e-10 Score=102.85 Aligned_cols=87 Identities=18% Similarity=0.258 Sum_probs=72.3
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FE 187 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~ 187 (359)
.+.++..+.+.++.+|||+|||+|..+..+++. ++.+|+|+|+|+.+++.|+++....+ .+++++++|+.+++ +.
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHH
Confidence 344566777888999999999999999999986 36899999999999999999988776 58999999998764 11
Q ss_pred ---CCccceEEeccc
Q 018194 188 ---DNHFDGAYSIEA 199 (359)
Q Consensus 188 ---~~~fD~v~~~~~ 199 (359)
.++||.|++...
T Consensus 93 ~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 93 TLGIEKVDGILMDLG 107 (301)
T ss_dssp HTTCSCEEEEEEECS
T ss_pred hcCCCCCCEEEEcCc
Confidence 157999998653
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.06 E-value=1.6e-09 Score=90.18 Aligned_cols=97 Identities=11% Similarity=0.007 Sum_probs=79.4
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCeEEEEcCCCCC---------------
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGL--DSLCEVVCGNFLKM--------------- 184 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~--~~~i~~~~~d~~~~--------------- 184 (359)
+..+|||+|| |..+..+++.++.+|+.+|.+++..+.+++.++..|+ .++|+++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4679999998 4788888875468999999999999999999999998 78999999997642
Q ss_pred C--------C-CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 185 P--------F-EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 185 ~--------~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
+ . ..++||+|+...- .....+..+.+.|+|||.+++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEE
Confidence 1 1 2368999999763 334677778899999999976
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.04 E-value=5.8e-10 Score=102.69 Aligned_cols=101 Identities=11% Similarity=-0.064 Sum_probs=82.9
Q ss_pred CCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHc---------------CCCCCeEEEEcCCCCCC
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKA---------------GLDSLCEVVCGNFLKMP 185 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~---------------~~~~~i~~~~~d~~~~~ 185 (359)
++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.++++++.. ++. +++++++|+.+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 5789999999999999999986 4569999999999999999999887 664 4999999987642
Q ss_pred C-CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 F-EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
. ..+.||+|++.- . .....++..+.+.|||||.+++..
T Consensus 126 ~~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1 135799999642 1 234788999999999999887753
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.03 E-value=4e-11 Score=104.71 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=70.5
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCH-------HHHHHHHHHHHHcCCCCCeEEEEcCCCCC-
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINE-------YQVNRARLHNKKAGLDSLCEVVCGNFLKM- 184 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~-------~~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 184 (359)
.+...+...++.+|||+|||+|..+..+++. +++|+++|+|+ .+++.|+++.+..++..+++++++|+.+.
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQM 152 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHH
Confidence 3444445566789999999999999999986 67999999999 99999988877666655699999999874
Q ss_pred C-CCC--CccceEEecccccc
Q 018194 185 P-FED--NHFDGAYSIEATCH 202 (359)
Q Consensus 185 ~-~~~--~~fD~v~~~~~l~~ 202 (359)
+ +++ ++||+|++.-.+.+
T Consensus 153 ~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 153 PALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHCCCSEEEECCCC--
T ss_pred HhhhccCCCccEEEECCCCCC
Confidence 2 343 68999999766554
No 269
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.02 E-value=4.8e-10 Score=103.30 Aligned_cols=103 Identities=11% Similarity=-0.105 Sum_probs=84.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cC-CEEEEEeCCHHHHHHHHHHHHHcCCCCC-eEEEEcCCCCCC--CCCCccceEE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SR-ANVVGITINEYQVNRARLHNKKAGLDSL-CEVVCGNFLKMP--FEDNHFDGAY 195 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~-i~~~~~d~~~~~--~~~~~fD~v~ 195 (359)
.++.+|||++||+|.++..++.. .+ .+|+++|+++.+++.++++++..++.++ ++++++|+.+.. ...+.||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999985 34 5899999999999999999999998766 999999986531 1245799999
Q ss_pred ecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 196 SIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 196 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+.- ......++..+.+.|+|||.+++..
T Consensus 131 lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 865 1234678999999999999887754
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.02 E-value=1e-09 Score=109.06 Aligned_cols=120 Identities=16% Similarity=0.182 Sum_probs=91.2
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh-------------------------------------------c
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-------------------------------------------S 144 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-------------------------------------------~ 144 (359)
+.+...++......++..|||.+||+|.++.+.+.. +
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 345566777777788899999999999998887752 1
Q ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEecccccc-c---CCHHHHHHH---HHh
Q 018194 145 RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--FEDNHFDGAYSIEATCH-A---PKLEDVYAE---VFR 215 (359)
Q Consensus 145 ~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~v~~~~~l~~-~---~~~~~~l~~---~~~ 215 (359)
..+|+|+|+++.+++.|++++...|+.+.+++.++|+.++. ...++||+|+++-.... + .+...+++. +.+
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 25899999999999999999999999888999999998874 33348999999854332 1 133444444 445
Q ss_pred ccCCCCEEEEEE
Q 018194 216 VLKPGSLYVSYE 227 (359)
Q Consensus 216 ~LkpgG~l~~~~ 227 (359)
.+.|||.+++..
T Consensus 336 ~~~~g~~~~ilt 347 (703)
T 3v97_A 336 NQFGGWNLSLFS 347 (703)
T ss_dssp HHCTTCEEEEEE
T ss_pred hhCCCCeEEEEe
Confidence 556899988853
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.00 E-value=2.3e-09 Score=93.09 Aligned_cols=76 Identities=18% Similarity=0.310 Sum_probs=64.8
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
....+.+++.+.+.++.+|||||||+|.++..+++.+..+|+++|+|+.+++.++++ . ..+++++++|+.+++++
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChh
Confidence 345667788888888999999999999999999987447999999999999999876 1 35799999999998765
Q ss_pred C
Q 018194 188 D 188 (359)
Q Consensus 188 ~ 188 (359)
+
T Consensus 92 ~ 92 (249)
T 3ftd_A 92 S 92 (249)
T ss_dssp G
T ss_pred H
Confidence 4
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.99 E-value=8.4e-10 Score=106.46 Aligned_cols=118 Identities=11% Similarity=0.043 Sum_probs=91.1
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc-------------------CCEEEEEeCCHHHHHHHHHHHHHcCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS-------------------RANVVGITINEYQVNRARLHNKKAGL 170 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~~v~g~D~s~~~~~~a~~~~~~~~~ 170 (359)
..+.+++.+...++.+|||.|||+|.++..+++.. ...++|+|+++.+++.|+.+....++
T Consensus 157 iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi 236 (541)
T 2ar0_A 157 LIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI 236 (541)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC
Confidence 34556666777788999999999999988877531 24799999999999999998877776
Q ss_pred CC----CeEEEEcCCCCCC-CCCCccceEEecccccccCC--------------HHHHHHHHHhccCCCCEEEEEE
Q 018194 171 DS----LCEVVCGNFLKMP-FEDNHFDGAYSIEATCHAPK--------------LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 171 ~~----~i~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~~--------------~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.. ++.+.++|....+ .+..+||+|+++-.+..... ...++..+.+.|||||++.++.
T Consensus 237 ~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 237 EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 53 2788999987643 34578999999865543321 2378999999999999998864
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.97 E-value=1.4e-09 Score=96.00 Aligned_cols=73 Identities=21% Similarity=0.340 Sum_probs=62.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCE----EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRAN----VVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM 184 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~----v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 184 (359)
...+.+++.+.+.++.+|||||||+|.++..+++.. .+ |+++|+|+.|++.++++. ..+++++++|+.++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARL-ATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHH-CBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhC-CCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 345667788888899999999999999999999863 34 999999999999999883 24799999999998
Q ss_pred CCC
Q 018194 185 PFE 187 (359)
Q Consensus 185 ~~~ 187 (359)
+++
T Consensus 103 ~~~ 105 (279)
T 3uzu_A 103 DFG 105 (279)
T ss_dssp CGG
T ss_pred Chh
Confidence 764
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.90 E-value=1e-09 Score=95.46 Aligned_cols=85 Identities=11% Similarity=0.144 Sum_probs=66.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCE--EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRAN--VVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~--v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 186 (359)
...+.+++.+.+.++.+|||||||+|.++. +++ +.+ |+++|+|+.|++.++++.... ++++++++|+.++++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCH
Confidence 345667777788889999999999999999 754 356 999999999999998876432 479999999998875
Q ss_pred CC-----CccceEEeccc
Q 018194 187 ED-----NHFDGAYSIEA 199 (359)
Q Consensus 187 ~~-----~~fD~v~~~~~ 199 (359)
++ +..|.|+++..
T Consensus 82 ~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp HHHHHHHTSCEEEEEECC
T ss_pred HHhhcccCCceEEEECCC
Confidence 42 12356666543
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.88 E-value=8.7e-10 Score=95.84 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=75.6
Q ss_pred HHHHHhcCCCCC--CEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc-------C-CCCCeEEEEcCC
Q 018194 112 EMAVDLIDVKAG--DRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA-------G-LDSLCEVVCGNF 181 (359)
Q Consensus 112 ~~~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~-------~-~~~~i~~~~~d~ 181 (359)
+.+.+.+.+.++ .+|||+|||+|..+..++.. +++|+++|+++.+...+++..+.. + +..+++++++|+
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 556677777777 89999999999999999987 679999999998866666554322 1 224699999998
Q ss_pred CCC-CCCCCccceEEecccccccCCHHHHHHHHHhccCCCC
Q 018194 182 LKM-PFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGS 221 (359)
Q Consensus 182 ~~~-~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG 221 (359)
.+. +....+||+|++.-...+- .....+++..++|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCC-CC-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 763 3222479999998776553 23355566666666644
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.88 E-value=1.8e-08 Score=96.84 Aligned_cols=108 Identities=19% Similarity=0.132 Sum_probs=84.9
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhc----CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCC--C-CCCCcc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHS----RANVVGITINEYQVNRARLHNKKAGLD-SLCEVVCGNFLKM--P-FEDNHF 191 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~----~~~v~g~D~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~--~-~~~~~f 191 (359)
..++.+|||.+||+|.+...++++. ...++|+|+++.++..|+.+....|+. .++.+.++|.... | .....|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 4578899999999999888877652 479999999999999999988877774 4688999998875 3 346789
Q ss_pred ceEEecccccc-------------------cC---C-HHHHHHHHHhccC-CCCEEEEEE
Q 018194 192 DGAYSIEATCH-------------------AP---K-LEDVYAEVFRVLK-PGSLYVSYE 227 (359)
Q Consensus 192 D~v~~~~~l~~-------------------~~---~-~~~~l~~~~~~Lk-pgG~l~~~~ 227 (359)
|+|+++-.+.. ++ + --.++..+.+.|| |||++.++.
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 99998743221 11 0 1248999999999 999998764
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.87 E-value=1.5e-09 Score=100.27 Aligned_cols=74 Identities=20% Similarity=0.253 Sum_probs=64.4
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc--CCCCCeEEEEcCCCCC-CC-CCCccceEEec
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA--GLDSLCEVVCGNFLKM-PF-EDNHFDGAYSI 197 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~i~~~~~d~~~~-~~-~~~~fD~v~~~ 197 (359)
+|.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++... ++ .+++++++|+.+. +. ++++||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 5889999999999999999886 579999999999999999999887 77 6899999999874 21 23589999985
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.87 E-value=4.6e-09 Score=101.18 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=89.0
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc----------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCC
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS----------------RANVVGITINEYQVNRARLHNKKAGLDSL 173 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----------------~~~v~g~D~s~~~~~~a~~~~~~~~~~~~ 173 (359)
..+.+++.+...++ +|||.+||+|.+...++++. ...++|+|+++.++..|+.+....++..+
T Consensus 233 Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 311 (544)
T 3khk_A 233 IVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFN 311 (544)
T ss_dssp HHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcc
Confidence 44556666666665 99999999999887765421 46899999999999999999888887766
Q ss_pred eEEEEcCCCCCC-CCCCccceEEecccccc-------------------------cC---C-HHHHHHHHHhccCCCCEE
Q 018194 174 CEVVCGNFLKMP-FEDNHFDGAYSIEATCH-------------------------AP---K-LEDVYAEVFRVLKPGSLY 223 (359)
Q Consensus 174 i~~~~~d~~~~~-~~~~~fD~v~~~~~l~~-------------------------~~---~-~~~~l~~~~~~LkpgG~l 223 (359)
+.+.++|....+ ++..+||+|+++-.+.. ++ + --.++..+.+.|||||++
T Consensus 312 i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ 391 (544)
T 3khk_A 312 FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSM 391 (544)
T ss_dssp CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEE
T ss_pred cceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceE
Confidence 666888876654 45678999999754432 11 0 126899999999999998
Q ss_pred EEEE
Q 018194 224 VSYE 227 (359)
Q Consensus 224 ~~~~ 227 (359)
.++.
T Consensus 392 aiVl 395 (544)
T 3khk_A 392 ALLL 395 (544)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8763
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.87 E-value=1.1e-08 Score=99.33 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCChHHHHHHh---hcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEe
Q 018194 122 AGDRILDVGCGVGGPMRAIAA---HSR--ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYS 196 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~---~~~--~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~ 196 (359)
.+..|||||||+|.++...++ ..+ .+|++||-|+ +...+++.....++.++|+++++|++++.+| +++|+|++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVS 434 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEE
Confidence 345899999999998544433 333 3789999997 5667888888889999999999999998776 68999998
Q ss_pred ccccccc--CCHHHHHHHHHhccCCCCEEE
Q 018194 197 IEATCHA--PKLEDVYAEVFRVLKPGSLYV 224 (359)
Q Consensus 197 ~~~l~~~--~~~~~~l~~~~~~LkpgG~l~ 224 (359)
-.+=..+ .....++....|.|||||.++
T Consensus 435 EwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 5432222 234478888899999999886
No 280
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.81 E-value=3.9e-09 Score=91.86 Aligned_cols=128 Identities=14% Similarity=0.235 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCCChHHHHHHh--------hcC-----CEEEEEeCCH---HHHH-----------HHHHHHHHcC----
Q 018194 121 KAGDRILDVGCGVGGPMRAIAA--------HSR-----ANVVGITINE---YQVN-----------RARLHNKKAG---- 169 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~--------~~~-----~~v~g~D~s~---~~~~-----------~a~~~~~~~~---- 169 (359)
.++.+|||+|+|+|..+..+++ .+. .+++++|..| +++. .+++......
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 4567999999999998877554 232 4899999876 4444 4555544310
Q ss_pred ------C---CCCeEEEEcCCCC-CCC-CC---CccceEEecc-cccccCC--HHHHHHHHHhccCCCCEEEEEEeeeCc
Q 018194 170 ------L---DSLCEVVCGNFLK-MPF-ED---NHFDGAYSIE-ATCHAPK--LEDVYAEVFRVLKPGSLYVSYEWVTTD 232 (359)
Q Consensus 170 ------~---~~~i~~~~~d~~~-~~~-~~---~~fD~v~~~~-~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~ 232 (359)
+ ..+++++.+|+.+ ++. ++ ..||+|+... +-...|+ ...+++.+.++|+|||+++.+ +.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ty--sa-- 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF--TS-- 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEES--CC--
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEE--eC--
Confidence 1 1367899999877 332 22 2799999853 2222233 368999999999999999852 11
Q ss_pred ccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEEe
Q 018194 233 KYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKD 279 (359)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~~ 279 (359)
...+++.|+++||++.+...
T Consensus 215 ---------------------------a~~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 215 ---------------------------AGFVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp ---------------------------BHHHHHHHHHHTEEEEEECC
T ss_pred ---------------------------CHHHHHHHHHCCCEEEeCCC
Confidence 13577889999999876533
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.78 E-value=3.6e-08 Score=86.67 Aligned_cols=106 Identities=21% Similarity=0.276 Sum_probs=83.6
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcC-CEEEEEeCCHHHHHHHHHHHHHc--C--CCCCeEEEEcCCCCC-CCCCCccceE
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSR-ANVVGITINEYQVNRARLHNKKA--G--LDSLCEVVCGNFLKM-PFEDNHFDGA 194 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~--~--~~~~i~~~~~d~~~~-~~~~~~fD~v 194 (359)
+...+||-||.|.|..++++.++++ .+|+.+|+++..++.+++.+... + -.++++++.+|.... .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 3457999999999999999999744 69999999999999999987542 1 146899999999875 3445789999
Q ss_pred EecccccccC----CHHHHHHHHHhccCCCCEEEEE
Q 018194 195 YSIEATCHAP----KLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 195 ~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+....=..-+ --.++++.+++.|+|||.++..
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 9754311111 1357999999999999999874
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.77 E-value=2.2e-08 Score=86.23 Aligned_cols=107 Identities=20% Similarity=0.135 Sum_probs=72.7
Q ss_pred HHhcCCCCCCEEEEECCCCChHHHHHHhhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccce
Q 018194 115 VDLIDVKAGDRILDVGCGVGGPMRAIAAHSR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDG 193 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 193 (359)
.+...++++.+|||||||+|.|+..+++..+ ..++|+|++-.+....... .. ...++.....++....++.+.||+
T Consensus 67 ~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~--~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 67 HERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QS--LGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp HHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CB--TTGGGEEEECSCCTTTSCCCCCSE
T ss_pred HHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-Cc--CCCCeEEEeccceehhcCCCCccE
Confidence 3335677888999999999999998887533 4788899874431000000 00 011456667776555677789999
Q ss_pred EEecccccccC----CH---HHHHHHHHhccCCC-CEEEE
Q 018194 194 AYSIEATCHAP----KL---EDVYAEVFRVLKPG-SLYVS 225 (359)
Q Consensus 194 v~~~~~l~~~~----~~---~~~l~~~~~~Lkpg-G~l~~ 225 (359)
|++..+.+ .. |. ..+|+.+.++|+|| |.|++
T Consensus 144 VlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 144 LLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 99987665 22 21 13578889999999 99998
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.77 E-value=3.3e-08 Score=95.77 Aligned_cols=101 Identities=14% Similarity=0.053 Sum_probs=76.3
Q ss_pred CCEEEEECCCCChHHHHHH---hhc-----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-
Q 018194 123 GDRILDVGCGVGGPMRAIA---AHS-----------RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE- 187 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~---~~~-----------~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~- 187 (359)
+..|||||||+|.++...+ +.. ..+|++||.|+..+...+.+.. .++.++|+++.+|++++.++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 4589999999999974332 111 2499999999987766665554 67888999999999998663
Q ss_pred ----CCccceEEecccccccC--CHHHHHHHHHhccCCCCEEE
Q 018194 188 ----DNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYV 224 (359)
Q Consensus 188 ----~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~ 224 (359)
.++.|+|++-..-.... -..++|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 57899999866533221 24578888899999999876
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.60 E-value=1.6e-07 Score=82.42 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=81.9
Q ss_pred CCCCEEEEECCCCChHHHHHHhh------cCCEEEEEeCCH--------------------------HHHHHHHHHHHHc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH------SRANVVGITINE--------------------------YQVNRARLHNKKA 168 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~------~~~~v~g~D~s~--------------------------~~~~~a~~~~~~~ 168 (359)
....+|||+|+..|..+..++.. ++.+|+++|..+ ..++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34569999999999998888763 367999999642 1467789999999
Q ss_pred CCC-CCeEEEEcCCCC-CC-CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 169 GLD-SLCEVVCGNFLK-MP-FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 169 ~~~-~~i~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+. ++|+++.+|+.+ ++ ++.++||+|+.-.-. .......|..+...|+|||.+++-+
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcC
Confidence 984 899999999976 33 445789999987632 1234578999999999999998743
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.59 E-value=2.9e-07 Score=83.09 Aligned_cols=123 Identities=13% Similarity=0.067 Sum_probs=83.0
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 199 (359)
+.+|++|||+||.+|.|+..+++. ++.|++||+.+-. .... . .++|+++++|+.....+.+.||+|+|..+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~l~-~~l~----~---~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGPMA-QSLM----D---TGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSCCC-HHHH----T---TTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhhcC-hhhc----c---CCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 568999999999999999999986 6799999986421 1111 1 35799999999988766778999999775
Q ss_pred ccccCCHHHHHHHHHhccCCC---CEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeE
Q 018194 200 TCHAPKLEDVYAEVFRVLKPG---SLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEV 274 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~Lkpg---G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 274 (359)
.++...+.-+.+.|..| +.++....... .....+.. ....+.+.|+..||..
T Consensus 280 ----~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk-------~~~~~l~~------------~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 280 ----EKPAKVAALMAQWLVNGWCRETIFNLKLPMK-------KRYEEVSH------------NLAYIQAQLDEHGINA 334 (375)
T ss_dssp ----SCHHHHHHHHHHHHHTTSCSEEEEEEECCSS-------SHHHHHHH------------HHHHHHHHHHHTTCCE
T ss_pred ----CChHHhHHHHHHHHhccccceEEEEEEeccc-------chHHHHHH------------HHHHHHHHHHhcCcch
Confidence 34555655555555554 44443322211 11111111 1246778899999974
No 286
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.58 E-value=1.7e-07 Score=85.18 Aligned_cols=117 Identities=16% Similarity=0.148 Sum_probs=88.5
Q ss_pred HHHHhcCCCCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CCeEEEEcCCCCCC-
Q 018194 113 MAVDLIDVKAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLD-----SLCEVVCGNFLKMP- 185 (359)
Q Consensus 113 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~-----~~i~~~~~d~~~~~- 185 (359)
.....+...+|.+|||+++|.|+=+..+++. .+..|+++|+|+..++..+++....+.. .++.+...|...++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 3455678899999999999999999888874 2348999999999999999998877643 47888888887754
Q ss_pred CCCCccceEEeccc--------ccccCC----------------HHHHHHHHHhccCCCCEEEEEEee
Q 018194 186 FEDNHFDGAYSIEA--------TCHAPK----------------LEDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 186 ~~~~~fD~v~~~~~--------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
...+.||.|++.-. +..-++ ..++|....+.|||||+|+....+
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 34578999986321 111111 246888999999999999876433
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.56 E-value=1.4e-07 Score=81.89 Aligned_cols=84 Identities=26% Similarity=0.330 Sum_probs=69.6
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----- 185 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 185 (359)
.+.+++.+.+.++..+||++||.|..+..+++. +.+|+|+|.++.+++.+++ ... ++++++++|+.+++
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHH
Confidence 455677778889999999999999999999997 7799999999999999988 543 48999999998864
Q ss_pred CCCCccceEEecccc
Q 018194 186 FEDNHFDGAYSIEAT 200 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l 200 (359)
...+++|.|++...+
T Consensus 85 ~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 85 LGVERVDGILADLGV 99 (285)
T ss_dssp TTCSCEEEEEEECSC
T ss_pred cCCCCcCEEEeCCcc
Confidence 223579999975543
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.51 E-value=5.3e-08 Score=83.99 Aligned_cols=108 Identities=17% Similarity=0.086 Sum_probs=70.5
Q ss_pred HHhcCCCCCCEEEEECCCCChHHHHHHhhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccce
Q 018194 115 VDLIDVKAGDRILDVGCGVGGPMRAIAAHSR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDG 193 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 193 (359)
.+...+.++.+|||||||+|.|+..+++..+ ..|+|+|++..+...+... .....++.....++....++.+.+|+
T Consensus 83 ~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~---~~~g~~ii~~~~~~dv~~l~~~~~Dv 159 (282)
T 3gcz_A 83 EERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR---TTLGWNLIRFKDKTDVFNMEVIPGDT 159 (282)
T ss_dssp HHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC---CBTTGGGEEEECSCCGGGSCCCCCSE
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc---ccCCCceEEeeCCcchhhcCCCCcCE
Confidence 3334677889999999999999998886433 4799999986532211100 00112334444443333456789999
Q ss_pred EEecccccccCC-------HHHHHHHHHhccCCC--CEEEEE
Q 018194 194 AYSIEATCHAPK-------LEDVYAEVFRVLKPG--SLYVSY 226 (359)
Q Consensus 194 v~~~~~l~~~~~-------~~~~l~~~~~~Lkpg--G~l~~~ 226 (359)
|+|..+.. ... ...+|.-+.++|+|| |.|++=
T Consensus 160 VLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 160 LLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 99988766 321 123577778999999 999873
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.49 E-value=3e-07 Score=71.15 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=67.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCC-hHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 018194 108 RLHEEMAVDLIDVKAGDRILDVGCGVG-GPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF 186 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vLDiGcG~G-~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 186 (359)
+.+.+++.+.. .++.+|||||||.| ..+..|++..++.|+++|+++..++ +++.|+.+...
T Consensus 23 e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~ 84 (153)
T 2k4m_A 23 NDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRM 84 (153)
T ss_dssp HHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCH
T ss_pred HHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCcc
Confidence 34455555554 34679999999999 6999999866899999999986543 88899987332
Q ss_pred CC-CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 187 ED-NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 187 ~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.. ..||+|++... -++....+.++.+.+ |.-+++.
T Consensus 85 ~~Y~~~DLIYsirP---P~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 85 EIYRGAALIYSIRP---PAEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp HHHTTEEEEEEESC---CTTTHHHHHHHHHHH--TCEEEEE
T ss_pred cccCCcCEEEEcCC---CHHHHHHHHHHHHHc--CCCEEEE
Confidence 11 47999988663 235666666666543 5566664
No 290
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.47 E-value=7.7e-07 Score=87.60 Aligned_cols=107 Identities=9% Similarity=0.032 Sum_probs=75.2
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcC----CEEEEEeCCHHHHHHH--HHHHHH----cCCCCCeEEEEcCCCCCC-CCC
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSR----ANVVGITINEYQVNRA--RLHNKK----AGLDSLCEVVCGNFLKMP-FED 188 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~----~~v~g~D~s~~~~~~a--~~~~~~----~~~~~~i~~~~~d~~~~~-~~~ 188 (359)
..++.+|||.|||+|.++..+++..+ .+++|+|+++.+++.| +..... .+.. ...+...|+.... ...
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~-~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNN-APTITGEDVCSLNPEDF 397 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTB-CCEEECCCGGGCCGGGG
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCC-cceEEecchhccccccc
Confidence 34678999999999999999887532 5899999999999999 433322 1221 2345566665532 345
Q ss_pred CccceEEecccccc-cC---------------------------C-HHHHHHHHHhccCCCCEEEEEE
Q 018194 189 NHFDGAYSIEATCH-AP---------------------------K-LEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 189 ~~fD~v~~~~~l~~-~~---------------------------~-~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
..||+|+++-.... .. + ...++..+.+.|+|||++.++.
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 78999999765521 10 0 2347788999999999998863
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.38 E-value=4.4e-07 Score=82.24 Aligned_cols=106 Identities=19% Similarity=0.239 Sum_probs=79.3
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcC---C----CCCeEEEEcCCCCCC----CCCC
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAG---L----DSLCEVVCGNFLKMP----FEDN 189 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~---~----~~~i~~~~~d~~~~~----~~~~ 189 (359)
.++.+||-||.|.|..++++.+++..+|+.+|+++..++.+++.+.... . .++++++.+|+...- -..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3568999999999999999999766799999999999999998754210 1 135889999986531 1246
Q ss_pred ccceEEeccccccc-CC---------HHHHHHHHHhccCCCCEEEEE
Q 018194 190 HFDGAYSIEATCHA-PK---------LEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~~l~~~-~~---------~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+||+|+....-... ++ ..++++.+++.|+|||.++..
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 89999986321110 11 257889999999999999864
No 292
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.37 E-value=1.6e-05 Score=76.37 Aligned_cols=118 Identities=18% Similarity=0.242 Sum_probs=86.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhc--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCe
Q 018194 109 LHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHS--------------RANVVGITINEYQVNRARLHNKKAGLDSLC 174 (359)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i 174 (359)
...+.+++.+...++.+|+|-+||+|.+.....++. ...++|+|+++.+...|+.+..-.|.. ..
T Consensus 204 ~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~ 282 (530)
T 3ufb_A 204 PVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YP 282 (530)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CC
T ss_pred HHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cc
Confidence 445667778888889999999999999887665421 247999999999999999887777764 34
Q ss_pred EEEEcCCCCCCC----CCCccceEEecccccccC---------------C-HHHHHHHHHhccC-------CCCEEEEEE
Q 018194 175 EVVCGNFLKMPF----EDNHFDGAYSIEATCHAP---------------K-LEDVYAEVFRVLK-------PGSLYVSYE 227 (359)
Q Consensus 175 ~~~~~d~~~~~~----~~~~fD~v~~~~~l~~~~---------------~-~~~~l~~~~~~Lk-------pgG~l~~~~ 227 (359)
.+..+|....+. +...||+|+++-.+..-. + -..++..+.+.|| |||++.++-
T Consensus 283 ~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 283 RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 677888766542 235799999987653211 1 1246777888776 799998864
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.30 E-value=1.6e-06 Score=75.31 Aligned_cols=103 Identities=17% Similarity=0.108 Sum_probs=66.1
Q ss_pred CCCCCEEEEECCCCChHHHHHHhhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 120 VKAGDRILDVGCGVGGPMRAIAAHSR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
+.++.+||||||++|.|+..+++..+ ..|+|+|++..+...... .. ....++.....++....+..+.+|+|++..
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~--~~~~~iv~~~~~~di~~l~~~~~DlVlsD~ 155 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQ--TLGWNIVKFKDKSNVFTMPTEPSDTLLCDI 155 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CC--BTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cc--ccCCceEEeecCceeeecCCCCcCEEeecC
Confidence 45889999999999999999997533 489999997543110000 00 001123333333322334567899999977
Q ss_pred cccccCCH-------HHHHHHHHhccCCC-CEEEEE
Q 018194 199 ATCHAPKL-------EDVYAEVFRVLKPG-SLYVSY 226 (359)
Q Consensus 199 ~l~~~~~~-------~~~l~~~~~~Lkpg-G~l~~~ 226 (359)
+.. .... ..+|.-+.++|+|| |.|++=
T Consensus 156 APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 156 GES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred cCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 655 3221 34577778999999 999984
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.19 E-value=6.2e-06 Score=71.18 Aligned_cols=107 Identities=20% Similarity=0.228 Sum_probs=71.7
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCCCCCCCcc
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCG-NFLKMPFEDNHF 191 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~f 191 (359)
+.+...+.++.+||||||++|.|+...+...++ +|+|+|+...-.+.= ......++ ..|.+..+ |+..++. ..+
T Consensus 86 i~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~l~~--~~~ 161 (321)
T 3lkz_A 86 LVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFYRPS--ECC 161 (321)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTSSCC--CCC
T ss_pred HHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhhCCC--CCC
Confidence 444456778899999999999999988875554 799999975511000 00001111 23788887 8877653 679
Q ss_pred ceEEecccccccCCHH-------HHHHHHHhccCCC-CEEEE
Q 018194 192 DGAYSIEATCHAPKLE-------DVYAEVFRVLKPG-SLYVS 225 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~-------~~l~~~~~~Lkpg-G~l~~ 225 (359)
|+|+|.-. ..-+++. .+|.-+.+.|++| |-+++
T Consensus 162 D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 162 DTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 99999776 5444422 3666667889998 87776
No 295
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.16 E-value=3.4e-05 Score=69.51 Aligned_cols=149 Identities=10% Similarity=0.102 Sum_probs=101.7
Q ss_pred CCCCEEEEECCCCChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcC--------------------CCCCeEEEEc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAG--------------------LDSLCEVVCG 179 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~--------------------~~~~i~~~~~ 179 (359)
.+...|+.+|||.......+... ++..++-+|. |..++.-++.+.+.+ .+++..++..
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35579999999999988888763 5678888888 888877777766541 1367899999
Q ss_pred CCCCCCC---------CCCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhh
Q 018194 180 NFLKMPF---------EDNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGI 248 (359)
Q Consensus 180 d~~~~~~---------~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
|+.+... ..+...++++-.++.+++ ....+++.+.+.. |+|.++++|...... .....-......+
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~--~~~~fg~~m~~~l 251 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQ--PNDRFGAIMQSNL 251 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCS--TTCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCC--CcchHHHHHHHHh
Confidence 9987421 234578899999999996 4668888888876 788888777654411 1111111111111
Q ss_pred h--cCCCCC---CCCCHHHHHHHHHhCCCe
Q 018194 249 E--RGDALP---GLRSYAEITEIAKRVGFE 273 (359)
Q Consensus 249 ~--~~~~~~---~~~~~~~~~~~l~~aGF~ 273 (359)
. .+..++ .+.++++..+.|+++||+
T Consensus 252 ~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 252 KESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred hcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 1 122222 346889999999999998
No 296
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.09 E-value=5.7e-07 Score=100.61 Aligned_cols=147 Identities=12% Similarity=-0.002 Sum_probs=71.4
Q ss_pred CCCCEEEEECCCCChHHHHHHhhc------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccce
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHS------RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-PFEDNHFDG 193 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~------~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~ 193 (359)
.+..+|||||.|+|..+..+.+.. ..+++..|+|+...+.++++++.. ++.....|..+. ++...+||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 467899999999998766554421 137899999999888888777653 233333344332 334567999
Q ss_pred EEecccccccCCHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCe
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFE 273 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 273 (359)
|++..++|..++....|++++++|||||++++.+.......... ..++... ........+.++|.++|+++||.
T Consensus 1315 via~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~----~~~~~~~--~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A 1315 LVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEM----VGFLTSP--EQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp EEEECC--------------------CCEEEEEEC--------------------------------CTTTTSSTTTTEE
T ss_pred EEEcccccccccHHHHHHHHHHhcCCCcEEEEEecccccccccc----ccccccc--cccCCcccCHHHHHHHHHhCCCc
Confidence 99999998888999999999999999999998764321100000 0000000 00011234556788889999998
Q ss_pred EEEE
Q 018194 274 VVKE 277 (359)
Q Consensus 274 ~i~~ 277 (359)
.+..
T Consensus 1389 ~~~~ 1392 (2512)
T 2vz8_A 1389 LVAL 1392 (2512)
T ss_dssp EEEE
T ss_pred eeee
Confidence 8765
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.08 E-value=3.8e-05 Score=64.17 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=71.3
Q ss_pred HHHhcCCCCCCEEEEECCCCChHHHHHHhhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCCCCCCCcc
Q 018194 114 AVDLIDVKAGDRILDVGCGVGGPMRAIAAHSR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCG-NFLKMPFEDNHF 191 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~f 191 (359)
+.+...+.++++|||+||++|.|+...+...+ .+|+|+|+...-.+. -......|+ +.++|..+ |+..++ ..++
T Consensus 70 i~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv~~~~--~~~~ 145 (267)
T 3p8z_A 70 FVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDVFYLP--PEKC 145 (267)
T ss_dssp HHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCGGGCC--CCCC
T ss_pred HHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccceeecC--Cccc
Confidence 44444678899999999999999998887545 479999996542210 000112233 46899999 976654 3679
Q ss_pred ceEEecccccccCCH-------HHHHHHHHhccCCCCEEEE
Q 018194 192 DGAYSIEATCHAPKL-------EDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 192 D~v~~~~~l~~~~~~-------~~~l~~~~~~LkpgG~l~~ 225 (359)
|.|+|...- .-+++ ..+|+-+.+.|++ |-+++
T Consensus 146 DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 146 DTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp SEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred cEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 999997654 22332 2366666788999 66665
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.04 E-value=1.3e-05 Score=67.99 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=63.6
Q ss_pred hcCCCCCCEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCe---EEEEc-CCCCCCCCCCcc
Q 018194 117 LIDVKAGDRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLC---EVVCG-NFLKMPFEDNHF 191 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i---~~~~~-d~~~~~~~~~~f 191 (359)
..-++|+++|||+||+.|.|+...++..+. .|.|.++.... .. ......+..+ .|.++ |+.+++ ...+
T Consensus 68 K~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~----~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 68 RRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE----EPMLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp TTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC----CCCCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred cCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc----CCCcccCCCceEEEeeccCCccCCC--CCCC
Confidence 335778999999999999999999886222 44455444321 00 0000000223 45547 998743 4679
Q ss_pred ceEEecccccccC----CHH---HHHHHHHhccCCCC-EEEE
Q 018194 192 DGAYSIEATCHAP----KLE---DVYAEVFRVLKPGS-LYVS 225 (359)
Q Consensus 192 D~v~~~~~l~~~~----~~~---~~l~~~~~~LkpgG-~l~~ 225 (359)
|+|+|..+-. .. |.. .+|.-+.++|+||| .|++
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 9999987654 32 211 25666779999999 7876
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.96 E-value=3.2e-05 Score=68.74 Aligned_cols=57 Identities=21% Similarity=0.237 Sum_probs=47.4
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc
Q 018194 110 HEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKA 168 (359)
Q Consensus 110 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 168 (359)
+.+.++.... .++..|||++||+|..+..+++. +.+++|+|+++.+++.|++++...
T Consensus 224 l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 224 LAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3444555544 57899999999999999988774 789999999999999999998765
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.81 E-value=0.00054 Score=60.99 Aligned_cols=148 Identities=9% Similarity=0.016 Sum_probs=96.3
Q ss_pred CEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcC--CCCCeEEEEcCCCCCC---------CCCCccc
Q 018194 124 DRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAG--LDSLCEVVCGNFLKMP---------FEDNHFD 192 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~---------~~~~~fD 192 (359)
..|++||||-=.....+....++.++=+| .|..++..++.....+ ...+..++.+|+.+ . +.....-
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 57999999987776666532247999999 5999999888887543 24578899999987 3 1223345
Q ss_pred eEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHH-hhhhcCC--------CCCCCCC-H
Q 018194 193 GAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDII-QGIERGD--------ALPGLRS-Y 260 (359)
Q Consensus 193 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~-~ 260 (359)
++++-.+++|++ +...+++.+...+.||+.+++-. ...+. ........... ..+.... ......+ .
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~-~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 259 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET-SPLHG-DEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENR 259 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC-CCTTC-SHHHHHHHHHHHHHHC-----------CCTTCCTTC
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe-cCCCC-cchhHHHHHHHHHHHHHcCCcCCCCccccccCCCCh
Confidence 788888999987 36688999999888998887732 22211 10000111111 2221111 1112224 6
Q ss_pred HHHHHHHHhCCCeEE
Q 018194 261 AEITEIAKRVGFEVV 275 (359)
Q Consensus 261 ~~~~~~l~~aGF~~i 275 (359)
+++.+.|.+.||+.+
T Consensus 260 ~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 260 AVVADWLNRHGWRAT 274 (310)
T ss_dssp CCHHHHHTTTTEEEE
T ss_pred HHHHHHHHHCcCccc
Confidence 789999999999988
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.78 E-value=2.6e-05 Score=69.26 Aligned_cols=86 Identities=17% Similarity=0.238 Sum_probs=68.8
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--C
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--F 186 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~ 186 (359)
.+.++..+.+.||..++|..||.|..+..+++. +..+|+|+|.++.+++.++ +. ..++++++++++.++. +
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHH
Confidence 456777888899999999999999999999985 4579999999999999884 33 1468999999998863 1
Q ss_pred C----CCccceEEeccccc
Q 018194 187 E----DNHFDGAYSIEATC 201 (359)
Q Consensus 187 ~----~~~fD~v~~~~~l~ 201 (359)
+ .+++|.|+....+.
T Consensus 121 ~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHTTCTTCEEEEEEECSCC
T ss_pred HhcCCCCcccEEEECCccC
Confidence 1 13699998876554
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.51 E-value=0.0003 Score=63.55 Aligned_cols=72 Identities=11% Similarity=-0.008 Sum_probs=58.1
Q ss_pred HHHHHHHHhcCCCC------CCEEEEECCCCChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 018194 109 LHEEMAVDLIDVKA------GDRILDVGCGVGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF 181 (359)
Q Consensus 109 ~~~~~~~~~~~~~~------~~~vLDiGcG~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~ 181 (359)
...+.|++.+.+.+ +..|||||.|.|.+|..|++.. ..+|+++|+++.++...++.. . .++++++.+|+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~ 114 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCc
Confidence 44566666666653 5899999999999999999852 359999999999999988776 2 35899999999
Q ss_pred CCC
Q 018194 182 LKM 184 (359)
Q Consensus 182 ~~~ 184 (359)
.++
T Consensus 115 l~~ 117 (353)
T 1i4w_A 115 YDW 117 (353)
T ss_dssp TCH
T ss_pred cch
Confidence 765
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.41 E-value=0.00036 Score=60.26 Aligned_cols=102 Identities=13% Similarity=0.120 Sum_probs=65.5
Q ss_pred HHHHHHHHH-hcCCCCCCEEEEECC------CCChHHHHHHh-hc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE
Q 018194 108 RLHEEMAVD-LIDVKAGDRILDVGC------GVGGPMRAIAA-HS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVC 178 (359)
Q Consensus 108 ~~~~~~~~~-~~~~~~~~~vLDiGc------G~G~~~~~l~~-~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~ 178 (359)
..+.+++-. .+..+.+++|||+|+ -.|.+ .+.+ .+ ++.|+++|+.+-.. ... .+++
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s------------da~-~~Iq 158 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS------------DAD-STLI 158 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC------------SSS-EEEE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc------------CCC-eEEE
Confidence 334455522 345678999999997 44552 2222 23 36999999976431 112 4599
Q ss_pred cCCCCCCCCCCccceEEeccccccc-----CC------HHHHHHHHHhccCCCCEEEE
Q 018194 179 GNFLKMPFEDNHFDGAYSIEATCHA-----PK------LEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 179 ~d~~~~~~~~~~fD~v~~~~~l~~~-----~~------~~~~l~~~~~~LkpgG~l~~ 225 (359)
+|+.... ..++||+|++-.+-.-. +. .+.++.-+.++|+|||.|++
T Consensus 159 GD~~~~~-~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 159 GDCATVH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp SCGGGEE-ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccc-cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE
Confidence 9986643 24789999987643221 11 34566677889999999997
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.33 E-value=0.00057 Score=59.35 Aligned_cols=57 Identities=21% Similarity=0.203 Sum_probs=45.4
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 018194 111 EEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAG 169 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~ 169 (359)
.+.+++... .++..|||..||+|..+....+ .+.+++|+|+++..++.+++++...+
T Consensus 202 ~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~-~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 202 IERIIRASS-NPNDLVLDCFMGSGTTAIVAKK-LGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHC-CTTCEEEESSCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 344444443 6789999999999999988776 47899999999999999999987543
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.24 E-value=0.0011 Score=58.46 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=77.4
Q ss_pred CCCEEEEECCCCChHHHHHH----h-hcCC--EEEEEeCCH--------H-HHHHHHHHHHHc----CCCCCeEEEEcCC
Q 018194 122 AGDRILDVGCGVGGPMRAIA----A-HSRA--NVVGITINE--------Y-QVNRARLHNKKA----GLDSLCEVVCGNF 181 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~----~-~~~~--~v~g~D~s~--------~-~~~~a~~~~~~~----~~~~~i~~~~~d~ 181 (359)
+.-+|||+|-|+|....... + .+.. +++.+|..+ . .-+..+...... +-.-.+++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 44689999999998553222 1 2344 556666421 1 111122222111 1111346778888
Q ss_pred CC-CC-CCCCccceEEecccccccCCH----HHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCC
Q 018194 182 LK-MP-FEDNHFDGAYSIEATCHAPKL----EDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALP 255 (359)
Q Consensus 182 ~~-~~-~~~~~fD~v~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
.+ ++ +++..||+++... +.--.++ ..+++.++++++|||.+.-+
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTY----------------------------- 225 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSY----------------------------- 225 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEES-----------------------------
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEE-----------------------------
Confidence 65 22 3445799998854 3222233 58999999999999998742
Q ss_pred CCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 256 GLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 256 ~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
.....+++.|+++||++.+..-+
T Consensus 226 --taag~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 226 --SSSLSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp --CCCHHHHHHHHHTTCEEEEEECC
T ss_pred --eCcHHHHHHHHHCCCEEEecCCC
Confidence 12257889999999999877544
No 306
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.17 E-value=0.024 Score=50.75 Aligned_cols=152 Identities=13% Similarity=0.145 Sum_probs=97.8
Q ss_pred CCCEEEEECCCCChHHHHHHhh--cCCEEEEEeCCHHHHHHHHHHHHHcC----------------------CCCCeEEE
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH--SRANVVGITINEYQVNRARLHNKKAG----------------------LDSLCEVV 177 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~----------------------~~~~i~~~ 177 (359)
+...|+-+|||.=.....+... .+..++=+|. |+.++.=++.+...+ .+.+.+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4569999999998877777653 3568888887 555554333333210 14578899
Q ss_pred EcCCCCCC----------CCCCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCcccccCchHHHHHH
Q 018194 178 CGNFLKMP----------FEDNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDII 245 (359)
Q Consensus 178 ~~d~~~~~----------~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
..|+.+.. +..+..-++++-.++.+++ ....+|+.+.+.. |+|.++++|...+. ........
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~-----d~fg~~M~ 242 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG-----DRFGQIMI 242 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT-----SHHHHHHH
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC-----CHHHHHHH
Confidence 99997731 3334556888888999986 4668888888766 55677777755321 12111122
Q ss_pred hhhh-cCCCCCC---CCCHHHHHHHHHhCCCeEEEEEec
Q 018194 246 QGIE-RGDALPG---LRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 246 ~~~~-~~~~~~~---~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
..+. .+..+.. +.+.++..+.|.++||+.+...++
T Consensus 243 ~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 243 ENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 2221 1222232 357788999999999999887766
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.15 E-value=0.003 Score=57.75 Aligned_cols=101 Identities=14% Similarity=0.134 Sum_probs=70.1
Q ss_pred HHHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CC
Q 018194 114 AVDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-----PF 186 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~ 186 (359)
+.+...++++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++. |.. .++..+-.++ ..
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHHh
Confidence 33556788999999999886 7788888887777 799999999998888654 321 2222221111 01
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
..+.+|+|+-.-. ....+....+.|+|||+++++.
T Consensus 255 ~~gg~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 255 TDGGVNFALESTG------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp TTSCEEEEEECSC------CHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCCCcEEEECCC------CHHHHHHHHHHHhcCCEEEEeC
Confidence 1236899876432 2356788999999999998753
No 308
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.90 E-value=0.0018 Score=59.88 Aligned_cols=104 Identities=16% Similarity=0.050 Sum_probs=70.6
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C------C
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P------F 186 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~------~ 186 (359)
....+.+|.+||-+|||. |..+..+++..|+ +|+++|.+++.++.+++. |. +.+..+-.+. . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga----~~i~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----GF----ETIDLRNSAPLRDQIDQIL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----TC----EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CC----cEEcCCCcchHHHHHHHHh
Confidence 456788999999999976 7788888887787 999999999988877542 32 3232221111 0 0
Q ss_pred CCCccceEEeccccccc--------CCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHA--------PKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
....+|+|+-.-.-... .++...+..+.++|+|||+++++-
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 12369999865432210 013457889999999999998753
No 309
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.86 E-value=0.0045 Score=57.15 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=71.7
Q ss_pred hcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC------CC
Q 018194 117 LIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MP------FE 187 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~------~~ 187 (359)
...+.+|.+||-+|+|. |..+..+++..|+ .|+++|.+++.++.+++. |. +.+...-.+ +. ..
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----Ga----~~i~~~~~~~~~~~v~~~t~ 251 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GF----EIADLSLDTPLHEQIAALLG 251 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC----EEEETTSSSCHHHHHHHHHS
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----CC----cEEccCCcchHHHHHHHHhC
Confidence 46788999999999875 7788888887787 799999999998888653 32 222211111 00 11
Q ss_pred CCccceEEeccccc---------ccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATC---------HAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+-.-.-. |.+++...++...++|++||+++++.
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 23689998654321 33455678899999999999998753
No 310
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.74 E-value=0.0055 Score=50.47 Aligned_cols=95 Identities=17% Similarity=0.206 Sum_probs=63.9
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-------- 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------- 185 (359)
....+.++++||..|+ |.|..+..++...|++|+++|.+++.++.+++ .+.. ... |..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVE---YVG--DSRSVDFADEILEL 102 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCS---EEE--ETTCSTHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCC---EEe--eCCcHHHHHHHHHH
Confidence 4457889999999995 34566666666567899999999988766543 2321 111 332211
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.....+|+++.+.. ...++.+.+.|+|||+++++
T Consensus 103 ~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEEC
T ss_pred hCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEE
Confidence 11246999986542 24678899999999999874
No 311
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.69 E-value=0.022 Score=51.88 Aligned_cols=99 Identities=21% Similarity=0.164 Sum_probs=69.6
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----C---
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-----P--- 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~--- 185 (359)
....+.+|.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |.. ..+...-.+. .
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTSSCHHHHHHSTTS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCCcCHHHHHHhhhh
Confidence 556788999999999875 6788888887787 999999999988887764 322 2221111110 0
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+.+|+|+-.-. -...+..+.++|+|||+++++.
T Consensus 249 ~~~gg~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 249 LVPGGVDVVIECAG------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp SSTTCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECS
T ss_pred ccCCCCCEEEECCC------CHHHHHHHHHHhccCCEEEEEe
Confidence 12347999886432 2456788999999999998864
No 312
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.60 E-value=0.0034 Score=56.87 Aligned_cols=95 Identities=17% Similarity=0.091 Sum_probs=68.1
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceE
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGA 194 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v 194 (359)
....+.+|.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++ .+...+ . ..+|+|
T Consensus 170 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~v~-~~~~~~--~-~~~D~v 238 (348)
T 3two_A 170 KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM----GVK---HFY-TDPKQC--K-EELDFI 238 (348)
T ss_dssp HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT----TCS---EEE-SSGGGC--C-SCEEEE
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc----CCC---eec-CCHHHH--h-cCCCEE
Confidence 345788999999999875 7788888887789999999999988877653 322 222 333222 2 279998
Q ss_pred EecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 195 YSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 195 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+-.-.-. ..+....++|+|||+++++.
T Consensus 239 id~~g~~------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPTH------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCSC------CCHHHHHTTEEEEEEEEECC
T ss_pred EECCCcH------HHHHHHHHHHhcCCEEEEEC
Confidence 8644321 24677889999999999864
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.52 E-value=0.0061 Score=55.25 Aligned_cols=99 Identities=19% Similarity=0.218 Sum_probs=69.2
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CC
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FE 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 187 (359)
+...+.+|.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+-.+.. ..
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT---DIINYKNGDIVEQILKATD 232 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC---EEECGGGSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc---eEEcCCCcCHHHHHHHHcC
Confidence 567888999999999875 7788888887787 899999999988887764 321 22221111110 12
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+-...- ...+..+.+.|+|||+++++-
T Consensus 233 g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 233 GKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEec
Confidence 2369999864321 246788899999999998754
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.50 E-value=0.007 Score=54.94 Aligned_cols=99 Identities=17% Similarity=0.103 Sum_probs=68.0
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC---CCCC-----C
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGN---FLKM-----P 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~~-----~ 185 (359)
....+.+|.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |.. .++..+ ..+. .
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----GAD---LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS---EEEECSSCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEEcCcccccchHHHHHHH
Confidence 456788999999999875 7788888887788 999999999988877643 322 222211 0010 0
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.....+|+|+-.-. ....+....++|+|||+++++.
T Consensus 238 ~~~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 238 QLGCKPEVTIECTG------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHTSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECS
T ss_pred HhCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEe
Confidence 00146899876432 2346788899999999998753
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.50 E-value=0.0066 Score=54.70 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=69.4
Q ss_pred HHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--C--CCC
Q 018194 115 VDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--F--EDN 189 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~--~~~ 189 (359)
+....+.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. ..+..+-.+.. . ..+
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL----GAE---VAVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp HHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHHHHHHHHHS
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc----CCC---EEEeCCCcCHHHHHHHhCC
Confidence 3556788999999999975 7888888987789999999999988887653 321 22221111110 0 013
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+|+|+-... -...++.+.+.|+|||+++++.
T Consensus 232 ~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 232 GAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SEEEEEESSC------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeC
Confidence 6788875432 2457788999999999998753
No 316
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.41 E-value=0.012 Score=53.66 Aligned_cols=99 Identities=18% Similarity=0.120 Sum_probs=69.2
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCC
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FED 188 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 188 (359)
+...+++|.+||-+|+|. |..+..+++..|++|+++|.++..++.+++. |.. .++..+..++. ...
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GAD---HGINRLEEDWVERVYALTGD 255 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCC---EEEcCCcccHHHHHHHHhCC
Confidence 456788999999999875 7788888887789999999999988887654 321 22222211110 122
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEEe
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEW 228 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 228 (359)
..+|+|+-.-. ...+..+.+.|+|||+++++..
T Consensus 256 ~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 256 RGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECC
T ss_pred CCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEec
Confidence 37999886543 1246778889999999998643
No 317
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.39 E-value=0.019 Score=51.99 Aligned_cols=99 Identities=15% Similarity=0.088 Sum_probs=68.1
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCCC------CC
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF-LKMP------FE 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~------~~ 187 (359)
....+.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. ..+..+- .+.. ..
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC----GAD---VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TCS---EEEECCTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh----CCC---EEEcCcccccHHHHHHHHhc
Confidence 456788999999999874 6777888887788999999999988887643 322 2222110 1110 11
Q ss_pred ---CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 ---DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ---~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+-.-. ....++...++|+|||+++++.
T Consensus 235 ~~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSG------NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHSSSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECS
T ss_pred cccCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEe
Confidence 246899876432 2346788899999999998753
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.35 E-value=0.011 Score=54.17 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=69.4
Q ss_pred HHHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC--CCCCC----
Q 018194 114 AVDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGN--FLKMP---- 185 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~~~~~---- 185 (359)
+.+...+.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++... -.++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GVN---EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TCC---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---EEEccccCchhHHHHHH
Confidence 34556788999999999974 7788888887787 899999999988877643 322 222211 11110
Q ss_pred -CCCCccceEEecccccccCCHHHHHHHHHhccCCC-CEEEEEE
Q 018194 186 -FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPG-SLYVSYE 227 (359)
Q Consensus 186 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 227 (359)
...+.+|+|+-.-. -...+..+.+.|+|| |+++++-
T Consensus 258 ~~~~gg~D~vid~~g------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCC------CHHHHHHHHHHhhccCCEEEEEc
Confidence 11247999886432 245678899999997 9998854
No 319
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.34 E-value=0.0014 Score=56.78 Aligned_cols=99 Identities=7% Similarity=-0.131 Sum_probs=76.6
Q ss_pred CCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC---CCCCccceEEecc
Q 018194 123 GDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MP---FEDNHFDGAYSIE 198 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~---~~~~~fD~v~~~~ 198 (359)
+..+||+=+|+|.++.++.+ .+.+++.+|.++..++..+++++. ..+++++..|... +. .+..+||+|++.-
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 45789999999999999888 457999999999999998887754 3579999999654 21 2345799999977
Q ss_pred cccccCCHHHHHHHHHh--ccCCCCEEEE
Q 018194 199 ATCHAPKLEDVYAEVFR--VLKPGSLYVS 225 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~--~LkpgG~l~~ 225 (359)
....-.+...+++.+.+ .+.|+|.+++
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 66543466777776665 4668999887
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.33 E-value=0.02 Score=52.02 Aligned_cols=101 Identities=19% Similarity=0.114 Sum_probs=70.2
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CCC------
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRAN-VVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFL--KMP------ 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~--~~~------ 185 (359)
....+.+|.+||-+|+|. |..+..+++..|++ |+++|.+++.++.+++. .. .-+.+...+.. ++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHH
Confidence 556788999999999875 77888888877886 99999999999988875 21 11222211110 000
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.....+|+|+-.-. -...+..+.++|+|||+++++.
T Consensus 248 t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 FGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp TSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECC
T ss_pred hCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEc
Confidence 12346899886432 2346788899999999999854
No 321
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.31 E-value=0.014 Score=50.08 Aligned_cols=102 Identities=18% Similarity=0.138 Sum_probs=69.9
Q ss_pred CEEEEECCCCChHHHHHHhh--------cCCEEEEEe-----CCH----------------------HHHHHHH---HHH
Q 018194 124 DRILDVGCGVGGPMRAIAAH--------SRANVVGIT-----INE----------------------YQVNRAR---LHN 165 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~--------~~~~v~g~D-----~s~----------------------~~~~~a~---~~~ 165 (359)
..|+|+||-.|..+..++.. +..+|+++| +.+ +.++... ++.
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 48999999999988876642 346999999 321 1122111 112
Q ss_pred HHcCC-CCCeEEEEcCCCCC-C-----CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 166 KKAGL-DSLCEVVCGNFLKM-P-----FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 166 ~~~~~-~~~i~~~~~d~~~~-~-----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+. .++|+++.+++.+. | .+..+||+|+.-.-. .......+..+...|+|||.+++-+
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 23444 47899999999773 2 245579999987632 2345678899999999999999844
No 322
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.30 E-value=0.01 Score=53.18 Aligned_cols=97 Identities=18% Similarity=0.234 Sum_probs=66.2
Q ss_pred HHHhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC-----
Q 018194 114 AVDLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MP----- 185 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~----- 185 (359)
+.+...+.++.+||-.|| |.|..+..+++..|++|+++|.+++.++.+++. +.. . . .|..+ ..
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~~--~-~--~d~~~~~~~~~~~ 207 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFD--A-A--FNYKTVNSLEEAL 207 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS--E-E--EETTSCSCHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCc--E-E--EecCCHHHHHHHH
Confidence 335567889999999998 456666677776788999999999888777332 221 1 1 23322 11
Q ss_pred --CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 186 --FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 186 --~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
...+.+|+++.+... ..+....+.|+|||+++++
T Consensus 208 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 208 KKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEE
Confidence 112468998876541 3578889999999999875
No 323
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.25 E-value=0.012 Score=53.02 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=66.5
Q ss_pred HHHhcCCCCCCEEEEECCC--CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------
Q 018194 114 AVDLIDVKAGDRILDVGCG--VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------ 185 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------ 185 (359)
+.+...+++|.+||-+|+| .|..+..+++..|++|+++|.+++.++.+++. |.. ..+..+-.+..
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GAA---YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CCc---EEEeCCcccHHHHHHHH
Confidence 3456788899999999997 46677888887789999999999988887763 321 22221111110
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.....+|+|+..-.- . .+.+..++|+|||+++++
T Consensus 209 ~~~~g~Dvvid~~g~------~-~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 209 TNGIGADAAIDSIGG------P-DGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp TTTSCEEEEEESSCH------H-HHHHHHHTEEEEEEEEEC
T ss_pred hCCCCCcEEEECCCC------h-hHHHHHHHhcCCCEEEEE
Confidence 123479998865431 1 223445899999999875
No 324
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.17 E-value=0.014 Score=54.09 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=51.3
Q ss_pred CCCCCCEEEEECCCCChHHHHHH-hh-cC-CEEEEEeCCHHHHHHHHHHHHH--cCCC-CCeEEEEcCCCC
Q 018194 119 DVKAGDRILDVGCGVGGPMRAIA-AH-SR-ANVVGITINEYQVNRARLHNKK--AGLD-SLCEVVCGNFLK 183 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~l~-~~-~~-~~v~g~D~s~~~~~~a~~~~~~--~~~~-~~i~~~~~d~~~ 183 (359)
.+.++..|+|||++.|..+..++ +. +. .+|+++|++|...+..+++.+. .+.. ++++++..-+.+
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 45789999999999999999888 43 22 6999999999999999998887 2222 577777665544
No 325
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.15 E-value=0.024 Score=51.71 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=68.1
Q ss_pred HHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCCC-----
Q 018194 115 VDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF--LKMP----- 185 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~----- 185 (359)
.....+.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+- .++.
T Consensus 183 ~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLIE 255 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHHH
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHHH
Confidence 3456788999999999874 6677888887787 899999999988887653 321 2221110 1110
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCC-CEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPG-SLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 227 (359)
...+.+|+|+-.-. ....++.+.+.|+|| |+++++-
T Consensus 256 ~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIG------NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCC------cHHHHHHHHHhhccCCcEEEEEe
Confidence 11236899876432 135678899999999 9998753
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.14 E-value=0.0047 Score=56.45 Aligned_cols=96 Identities=24% Similarity=0.189 Sum_probs=65.8
Q ss_pred hcCCCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-C-CCCCCccce
Q 018194 117 LIDVKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-M-PFEDNHFDG 193 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-~~~~~~fD~ 193 (359)
...+.+|.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++..+-.+ . ... +.+|+
T Consensus 189 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~-~g~Dv 260 (369)
T 1uuf_A 189 HWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL----GAD---EVVNSRNADEMAAHL-KSFDF 260 (369)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEETTCHHHHHTTT-TCEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEeccccHHHHHHhh-cCCCE
Confidence 35788999999999974 7778888887789999999999988887753 321 222211100 0 111 46899
Q ss_pred EEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
|+-.-.-. ..++...+.|+|||+++++
T Consensus 261 vid~~g~~------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILNTVAAP------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEECCSSC------CCHHHHHTTEEEEEEEEEC
T ss_pred EEECCCCH------HHHHHHHHHhccCCEEEEe
Confidence 88654321 2356778999999999875
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.11 E-value=0.022 Score=52.01 Aligned_cols=101 Identities=16% Similarity=0.106 Sum_probs=68.5
Q ss_pred HHHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCCC----
Q 018194 114 AVDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF--LKMP---- 185 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~---- 185 (359)
+.+...+.++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++. |.. .++..+- .++.
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GAT---ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCc---EEEecccccchHHHHHH
Confidence 33456788999999999874 6777888887787 899999999988887643 321 2221110 1110
Q ss_pred -CCCCccceEEecccccccCCHHHHHHHHHhccCCC-CEEEEEE
Q 018194 186 -FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPG-SLYVSYE 227 (359)
Q Consensus 186 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 227 (359)
...+.+|+|+-.-. ....+....++|+|| |+++++-
T Consensus 256 ~~t~gg~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 256 EKTNGGVDYAVECAG------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred HHhCCCCCEEEECCC------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 11236899886432 135678899999999 9998753
No 328
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.10 E-value=0.02 Score=52.24 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=67.8
Q ss_pred HHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC-C-CCCC-----
Q 018194 115 VDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGN-F-LKMP----- 185 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d-~-~~~~----- 185 (359)
.....+.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+ . .++.
T Consensus 185 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GAT---DFVNPNDHSEPISQVLSK 257 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCC---EEECGGGCSSCHHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----CCc---eEEeccccchhHHHHHHH
Confidence 3456788999999999874 6777888887787 899999999988887643 321 222111 0 1110
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCC-CEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPG-SLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 227 (359)
...+.+|+|+-.-. ....+..+.++|+|| |+++++.
T Consensus 258 ~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 258 MTNGGVDFSLECVG------NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCC------CHHHHHHHHHHhhcCCcEEEEEc
Confidence 11236899876432 135678899999999 9998753
No 329
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.08 E-value=0.016 Score=51.74 Aligned_cols=99 Identities=20% Similarity=0.218 Sum_probs=67.9
Q ss_pred HHhcCCCCCCEEEEECC-C-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------C
Q 018194 115 VDLIDVKAGDRILDVGC-G-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------F 186 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~ 186 (359)
.....++++.+||-.|+ | .|..+..+++..|++|+++|.+++.++.+++. |.. ..+..+-.+.. .
T Consensus 133 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 133 RQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GAW---ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEeCCCccHHHHHHHHh
Confidence 34457889999999983 3 57778888887789999999999988887653 311 22222111110 1
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
....+|+|+....- ..+....++|+|||+++++.
T Consensus 206 ~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECC
T ss_pred CCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEe
Confidence 23479998875432 35678889999999999853
No 330
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.07 E-value=0.011 Score=53.11 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=68.2
Q ss_pred HHHhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C
Q 018194 114 AVDLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F 186 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~ 186 (359)
+.+...++++.+||-.|+ |.|..+..+++..|++|+++|.+++.++.+.+. .|.. ..+..+-.+.. .
T Consensus 141 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 141 LLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFD---GAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp HHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCS---EEEETTTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCC---EEEECCCHHHHHHHHHh
Confidence 446678889999999998 356777788877789999999999888776322 2321 22211111110 1
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
..+.+|+|+.+.. ...+..+.+.|+|||+++++-
T Consensus 215 ~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 215 CPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp CTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred cCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEe
Confidence 1246899876543 146888999999999998753
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.04 E-value=0.026 Score=51.53 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=67.6
Q ss_pred HHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCCC-----
Q 018194 115 VDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF--LKMP----- 185 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~----- 185 (359)
.....+.++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++. |.. .++..+- .++.
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GAT---ECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc---eEecccccchhHHHHHHH
Confidence 3456788999999999874 6777888887787 899999999988887642 321 2221110 1110
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCC-CEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPG-SLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 227 (359)
...+.+|+|+-.-. ....+....+.|++| |+++++-
T Consensus 257 ~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIG------RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSC------CHHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCC------CHHHHHHHHHHhhcCCcEEEEec
Confidence 11236899876432 135678889999999 9998753
No 332
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.02 E-value=0.063 Score=48.27 Aligned_cols=94 Identities=22% Similarity=0.250 Sum_probs=66.2
Q ss_pred cCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CC
Q 018194 118 IDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--------FE 187 (359)
Q Consensus 118 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~ 187 (359)
..+.++.+||-+|+ |.|..+..+++..|++|+++|.+++.++.+++. +.. ..+ |..+.. ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----ga~---~~~--d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL----GAD---ETV--NYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCC---EEE--cCCcccHHHHHHHHhC
Confidence 47788999999998 467778888887788999999999988887642 321 122 322211 11
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+.... . ..++.+.+.|+++|+++++.
T Consensus 233 ~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 233 GKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESS
T ss_pred CCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEe
Confidence 246999987654 1 24677888999999998754
No 333
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.01 E-value=0.013 Score=52.81 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=67.8
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CC
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FE 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 187 (359)
....+.+|.+||-+|+ |.|..+..+++..|++|++++.+++.++.+++. |.. .++..+ .+.. ..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~---~v~~~~-~~~~~~v~~~~~ 224 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GAD---IVLPLE-EGWAKAVREATG 224 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEESS-TTHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEecCc-hhHHHHHHHHhC
Confidence 5567889999999997 357788888887789999999999988877763 321 223222 2211 12
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+-.-.- ..+..+.+.|+|||+++++.
T Consensus 225 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 225 GAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 2369999865442 24678889999999999753
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.93 E-value=0.026 Score=51.48 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=67.8
Q ss_pred HHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC-C-CCCC-----
Q 018194 115 VDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGN-F-LKMP----- 185 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d-~-~~~~----- 185 (359)
.....+.++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++. |.. .++..+ . .++.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GAT---DCLNPRELDKPVQDVITE 260 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc---EEEccccccchHHHHHHH
Confidence 3456788999999999874 6777888887787 899999999988877643 321 222111 0 0110
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCC-CEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPG-SLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 227 (359)
...+.+|+|+-.-. -...++.+.+.|++| |+++++-
T Consensus 261 ~~~~g~Dvvid~~G------~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 261 LTAGGVDYSLDCAG------TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHTSCBSEEEESSC------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCccEEEECCC------CHHHHHHHHHHhhcCCCEEEEEC
Confidence 11236899875432 135678899999999 9998753
No 335
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.93 E-value=0.023 Score=51.19 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=66.7
Q ss_pred HHhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC---CC----
Q 018194 115 VDLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK---MP---- 185 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~---~~---- 185 (359)
.+...+.++.+||-.|+ |.|..+..+++..|++|+++|.++..++.+++. .|.. ..+ |..+ +.
T Consensus 148 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 148 YEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD---DAF--NYKEESDLTAALK 219 (345)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS---EEE--ETTSCSCSHHHHH
T ss_pred HHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCCHHHHHHHHH
Confidence 35567889999999997 356777777776789999999999888776532 2321 122 2221 10
Q ss_pred -CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 186 -FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 186 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
...+.+|+|+.+.. . ..++...+.|+|||+++++
T Consensus 220 ~~~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 220 RCFPNGIDIYFENVG-----G--KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHCTTCEEEEEESSC-----H--HHHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCcEEEECCC-----H--HHHHHHHHHHhcCCEEEEE
Confidence 11246899886543 1 3688899999999999875
No 336
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.93 E-value=0.015 Score=51.75 Aligned_cols=92 Identities=12% Similarity=0.142 Sum_probs=64.1
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceE
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGA 194 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v 194 (359)
....+++|.+||-+|+|. |..+..+++..|++|++++ |++.++.+++. |.. .++ .|...+ ...+|+|
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----Ga~---~v~-~d~~~v---~~g~Dvv 203 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----GVR---HLY-REPSQV---TQKYFAI 203 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----TEE---EEE-SSGGGC---CSCEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----CCC---EEE-cCHHHh---CCCccEE
Confidence 667888999999999963 7788888887789999999 99888887664 211 222 242222 4679998
Q ss_pred EecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 195 YSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 195 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+-.-.- ..+....++|+|||+++++
T Consensus 204 ~d~~g~-------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNS-------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC--------------TTGGGEEEEEEEEEE
T ss_pred EECCCc-------hhHHHHHHHhcCCCEEEEE
Confidence 754321 1225678999999999875
No 337
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.93 E-value=0.016 Score=52.06 Aligned_cols=98 Identities=17% Similarity=0.293 Sum_probs=66.9
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CC
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FE 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 187 (359)
....+.++.+||-+|+ |.|..+..+++..|++|+++|.+++.++.+++. |.. ..+..+-.+.. ..
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~---~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GAE---YLINASKEDILRQVLKFTN 214 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEEeCCCchHHHHHHHHhC
Confidence 3457889999999994 346777788887789999999999988877653 311 22222211110 12
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+..-.- ..+..+.++|+|||+++++-
T Consensus 215 ~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 215 GKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 3469998875432 35778889999999998753
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.91 E-value=0.048 Score=50.33 Aligned_cols=97 Identities=19% Similarity=0.129 Sum_probs=63.4
Q ss_pred CCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCc
Q 018194 119 DVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FEDNH 190 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 190 (359)
.+.+|.+||=+|+|. |..+..+++..|+ +|+++|.++..++.+++. |.. .++..+-.++. .....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD---HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEEcCCCCCHHHHHHHHhCCCC
Confidence 678999999999874 6677888887788 999999999998888764 311 22221111110 12236
Q ss_pred cceEEecccccccCCHHHHHHHHH----hccCCCCEEEEEE
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVF----RVLKPGSLYVSYE 227 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~----~~LkpgG~l~~~~ 227 (359)
+|+|+-.-. .....+..+. +.+++||+++++-
T Consensus 283 ~D~vid~~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATG-----VPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSS-----CHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCC-----CcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 899875432 3323444444 4449999999854
No 339
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.87 E-value=0.029 Score=50.92 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=67.6
Q ss_pred HhcCCCCCCEEEEEC--CCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCC
Q 018194 116 DLIDVKAGDRILDVG--CGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FED 188 (359)
Q Consensus 116 ~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~ 188 (359)
+...++++.+||-+| +|.|..+..+++..|++|++++.+++.++.+++ .|.. ..+..+-.+.. ...
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhcC
Confidence 445788999999999 346778888888778999999999988887765 2321 22222111110 112
Q ss_pred CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 189 NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
..+|+|+..-. . ..++.+.+.|+++|+++++.
T Consensus 230 ~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 230 EGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEe
Confidence 46899886543 1 47788999999999998753
No 340
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.83 E-value=0.054 Score=48.38 Aligned_cols=122 Identities=17% Similarity=0.166 Sum_probs=79.2
Q ss_pred CCEEEEECCCCChHHHHHHhhcC--C-EE-EEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEE
Q 018194 123 GDRILDVGCGVGGPMRAIAAHSR--A-NV-VGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---FEDNHFDGAY 195 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~~~--~-~v-~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~ 195 (359)
..+++|+-||.|.++..+.+. | . .+ .++|+++..++..+.++.. .+..+|+.++. ++...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~-------~~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKE-------EVQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCC-------CCBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCC-------CcccCChhhcCHHHhccCCCCEEE
Confidence 469999999999999888774 3 3 45 6999999999888777531 15678888764 2223689998
Q ss_pred eccccccc-----------CCH-HHHHHHHHh-cc-----CCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCC
Q 018194 196 SIEATCHA-----------PKL-EDVYAEVFR-VL-----KPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGL 257 (359)
Q Consensus 196 ~~~~l~~~-----------~~~-~~~l~~~~~-~L-----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (359)
....-..+ .|. ..++.++.+ ++ +| .+++.|-...-. . -
T Consensus 82 ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P--~~~~lENV~gl~--~--------------------~ 137 (327)
T 3qv2_A 82 MSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKP--KHIFIENVPLFK--E--------------------S 137 (327)
T ss_dssp ECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCC--SEEEEEECGGGG--G--------------------S
T ss_pred ecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCC--CEEEEEchhhhc--C--------------------h
Confidence 76543322 232 255666666 44 45 555555433210 0 0
Q ss_pred CCHHHHHHHHHhCCCeEEE
Q 018194 258 RSYAEITEIAKRVGFEVVK 276 (359)
Q Consensus 258 ~~~~~~~~~l~~aGF~~i~ 276 (359)
...+.+.+.|++.||.+..
T Consensus 138 ~~~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 138 LVFKEIYNILIKNQYYIKD 156 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCCCEEEE
Confidence 1235788889999998754
No 341
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.82 E-value=0.031 Score=50.52 Aligned_cols=99 Identities=10% Similarity=0.057 Sum_probs=67.3
Q ss_pred HHhcCCCCCCEEEEECC-C-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC
Q 018194 115 VDLIDVKAGDRILDVGC-G-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE 187 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 187 (359)
.+...++++.+||-+|+ | .|..+..+++..|++|+++|.+++.++.+++. |.. ..+..+-.+.. ..
T Consensus 160 ~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 160 FQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK---RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEeCCchHHHHHHHHHh
Confidence 35567889999999953 3 46777888887789999999999988887753 321 22222111110 01
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+....- ..+....+.|+|||+++++.
T Consensus 233 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 233 GQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEE
Confidence 2468998875542 25677889999999998754
No 342
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.74 E-value=0.029 Score=50.62 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=66.3
Q ss_pred HhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CC
Q 018194 116 DLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FE 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 187 (359)
....+ ++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+-.++. ..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD---YVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEECCCCcCHHHHHHHHcC
Confidence 45577 899999999963 6677778877788 999999999988877653 321 22211111110 11
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+..-. ....++.+.+.|++||+++.+.
T Consensus 234 g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 234 GNGVDVFLEFSG------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEc
Confidence 236899886543 2356788899999999998753
No 343
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.69 E-value=0.0049 Score=55.69 Aligned_cols=94 Identities=16% Similarity=0.064 Sum_probs=65.2
Q ss_pred CCCCCCEEEEECCCC-ChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc----CC-CCCCCCCCc
Q 018194 119 DVKAGDRILDVGCGV-GGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCG----NF-LKMPFEDNH 190 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~----d~-~~~~~~~~~ 190 (359)
.+ ++.+||-+|+|. |..+..+++.. |++|+++|.|++.++.+++. |.. .++.. |. ..+. ....
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~-~g~g 238 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD---YVSEMKDAESLINKLT-DGLG 238 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS---EEECHHHHHHHHHHHH-TTCC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC---EEeccccchHHHHHhh-cCCC
Confidence 66 899999999974 66778888876 89999999999988887653 321 22211 11 0111 1236
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+|+-.-. ....++.+.++|+|||+++++.
T Consensus 239 ~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVG------TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSC------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ccEEEECCC------ChHHHHHHHHHhhcCCEEEEeC
Confidence 899886543 1346788899999999998753
No 344
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.66 E-value=0.028 Score=50.67 Aligned_cols=99 Identities=20% Similarity=0.283 Sum_probs=66.5
Q ss_pred HhcCCCCCCEEEEECCC--CChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CCC
Q 018194 116 DLIDVKAGDRILDVGCG--VGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-----PFE 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~ 187 (359)
....+.++.+||-.|+| .|..+..+++.. |++|+++|.+++.++.+++. +.. .++...-.+. ...
T Consensus 164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD---YVINASMQDPLAEIRRIT 236 (347)
T ss_dssp HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCC---EEecCCCccHHHHHHHHh
Confidence 34678899999999998 455666777766 89999999999988877543 311 1221111111 011
Q ss_pred C-CccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 D-NHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
. +.+|+|+.... ....++...++|+|||+++++.
T Consensus 237 ~~~~~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 ESKGVDAVIDLNN------SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTSCEEEEEESCC------CHHHHTTGGGGEEEEEEEEECC
T ss_pred cCCCceEEEECCC------CHHHHHHHHHHHhcCCEEEEEC
Confidence 1 47899886543 2346788899999999998753
No 345
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.016 Score=52.36 Aligned_cols=97 Identities=20% Similarity=0.192 Sum_probs=65.9
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC-------
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MP------- 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~------- 185 (359)
....+.++.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++ .+.. ..+ |..+ ..
T Consensus 163 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 163 KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE---VFI--DFTKEKDIVGAVLK 233 (347)
T ss_dssp HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC---EEE--ETTTCSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc---eEE--ecCccHhHHHHHHH
Confidence 3447788999999998 35667777777668899999999888776654 2321 122 3321 11
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+.+|+|+.... ....++.+.+.|++||+++++.
T Consensus 234 ~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 234 ATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECC
T ss_pred HhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEe
Confidence 01126898887543 2357888999999999998753
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.60 E-value=0.033 Score=50.09 Aligned_cols=96 Identities=21% Similarity=0.233 Sum_probs=66.3
Q ss_pred hcCCCCCCEEEEECCC-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------CC
Q 018194 117 LIDVKAGDRILDVGCG-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE------DN 189 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~~ 189 (359)
...+.++.+||-+|+| .|..+..+++..|++|+++|.++..++.+++ .|.. .+ .|..+..+. .+
T Consensus 159 ~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~--~d~~~~~~~~~~~~~~~ 229 (339)
T 1rjw_A 159 VTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---LV--VNPLKEDAAKFMKEKVG 229 (339)
T ss_dssp HHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EE--ECTTTSCHHHHHHHHHS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---EE--ecCCCccHHHHHHHHhC
Confidence 3477889999999986 3667777787778999999999998887754 2321 12 233221110 03
Q ss_pred ccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 190 HFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+|+|+.... ....++...+.|++||+++++.
T Consensus 230 ~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 230 GVHAAVVTAV------SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SEEEEEESSC------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC------CHHHHHHHHHHhhcCCEEEEec
Confidence 6898876442 1356788899999999998753
No 347
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.57 E-value=0.034 Score=50.25 Aligned_cols=96 Identities=22% Similarity=0.210 Sum_probs=65.6
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-------- 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------- 185 (359)
....+.++.+||-.|+ |.|..+..+++..|++|+++|.+++.++.+++. +.. ..+ |..+..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~---~~~--d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GAH---EVF--NHREVNYIDKIKKY 234 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS---EEE--ETTSTTHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CCC---EEE--eCCCchHHHHHHHH
Confidence 4567889999999997 346677777776789999999999888766532 321 122 222211
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.....+|+|+.+.. ...+....++|+|||+++++.
T Consensus 235 ~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 235 VGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 11236899887543 135678889999999998753
No 348
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.55 E-value=0.045 Score=48.83 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=65.2
Q ss_pred hcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------C
Q 018194 117 LIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--------F 186 (359)
Q Consensus 117 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~ 186 (359)
...+.++.+||-.|+ |.|..+..+++..|++|+++|.+++.++.+++. +.. ..+ |..+.. .
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~~---~~~--~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAW---QVI--NYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCccHHHHHHHHh
Confidence 557889999999994 456666777776688999999999888877652 211 122 222211 1
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
....+|+|+.+.. ...++.+.++|++||+++++.
T Consensus 206 ~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 1246899887654 245678889999999998753
No 349
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.51 E-value=0.033 Score=55.26 Aligned_cols=126 Identities=15% Similarity=0.254 Sum_probs=80.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh--------cC-----CEEEEEeC---CHHHHHHHHH-----------HHHHcC-----
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH--------SR-----ANVVGITI---NEYQVNRARL-----------HNKKAG----- 169 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~--------~~-----~~v~g~D~---s~~~~~~a~~-----------~~~~~~----- 169 (359)
+.-+|+|+|.|+|.....+.+. +. .+++.++. +.+.+..+-. ......
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4569999999999866655431 11 57899998 5555544322 121111
Q ss_pred -----CC---CCeEEEEcCCCCC-C-CC---CCccceEEeccccccc-CC--HHHHHHHHHhccCCCCEEEEEEeeeCcc
Q 018194 170 -----LD---SLCEVVCGNFLKM-P-FE---DNHFDGAYSIEATCHA-PK--LEDVYAEVFRVLKPGSLYVSYEWVTTDK 233 (359)
Q Consensus 170 -----~~---~~i~~~~~d~~~~-~-~~---~~~fD~v~~~~~l~~~-~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 233 (359)
+. -.+++..+|+.+. + +. ...+|+++....-... |+ ...++..+.++++|||.+.-.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~------- 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF------- 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES-------
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec-------
Confidence 01 1466778887652 2 21 4689999885522111 22 268999999999999987641
Q ss_pred cccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 234 YEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
.....+++.|+++||.+....
T Consensus 211 ------------------------~~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 211 ------------------------TAAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ------------------------CCCHHHHHHHHHTTCEEEEEE
T ss_pred ------------------------cCcHHHHHHHHhCCeEEEecc
Confidence 011478889999999988755
No 350
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.49 E-value=0.033 Score=50.82 Aligned_cols=69 Identities=17% Similarity=0.154 Sum_probs=53.8
Q ss_pred CEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC--------CCCccceE
Q 018194 124 DRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF--------EDNHFDGA 194 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~fD~v 194 (359)
.+++|+-||.|.++..+.+. |. .+.++|+++..++..+.++ ++..++++|+.++.. ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999988775 45 4669999999988877664 246788899987641 24579999
Q ss_pred Eeccc
Q 018194 195 YSIEA 199 (359)
Q Consensus 195 ~~~~~ 199 (359)
+...-
T Consensus 76 ~ggpP 80 (376)
T 3g7u_A 76 IGGPP 80 (376)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 87654
No 351
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.48 E-value=0.06 Score=48.45 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=66.6
Q ss_pred HHhcCCC------CCCEEEEEC-CC-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-
Q 018194 115 VDLIDVK------AGDRILDVG-CG-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP- 185 (359)
Q Consensus 115 ~~~~~~~------~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 185 (359)
.....+. ++.+||-+| +| .|..+..+++..|++|+++|.+++.++.+++. |.. .++..+ .++.
T Consensus 137 ~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~-~~~~~ 208 (346)
T 3fbg_A 137 FDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GAD---IVLNHK-ESLLN 208 (346)
T ss_dssp HTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TCS---EEECTT-SCHHH
T ss_pred HHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEEECC-ccHHH
Confidence 3455666 899999994 54 46778888887789999999999988888763 321 222111 1110
Q ss_pred ----CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 186 ----FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 186 ----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.....+|+|+-.. .-...+..+.++|+|||+++.+
T Consensus 209 ~~~~~~~~g~Dvv~d~~------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 209 QFKTQGIELVDYVFCTF------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp HHHHHTCCCEEEEEESS------CHHHHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCCCccEEEECC------CchHHHHHHHHHhccCCEEEEE
Confidence 1234689888643 2345678889999999999763
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.47 E-value=0.76 Score=45.50 Aligned_cols=154 Identities=10% Similarity=0.097 Sum_probs=94.8
Q ss_pred CCCEEEEECCCCChHHHHHHhh-c--------CCEEEEEeCCHHHHHHHHHHHHHcC--------------CC-------
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-S--------RANVVGITINEYQVNRARLHNKKAG--------------LD------- 171 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-~--------~~~v~g~D~s~~~~~~a~~~~~~~~--------------~~------- 171 (359)
+...|+-+|||.=.....|... + +..++=+|. |+.++.=++.+...+ .+
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 4568999999998888777553 2 346666666 444444333333111 00
Q ss_pred --CCeEEEEcCCCCCC----------C-CCCccceEEecccccccC--CHHHHHHHHHhccCCCCEEEEEEeeeCccccc
Q 018194 172 --SLCEVVCGNFLKMP----------F-EDNHFDGAYSIEATCHAP--KLEDVYAEVFRVLKPGSLYVSYEWVTTDKYEA 236 (359)
Q Consensus 172 --~~i~~~~~d~~~~~----------~-~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 236 (359)
.+.+++..|+.+.. + ..+..-++++-.++.+++ +...+|+.+.+. |+|.++++|...+.. .
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~--~ 261 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKG--P 261 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTC--T
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCC--C
Confidence 36889999998741 1 333445677888888986 466888888764 788888877544321 1
Q ss_pred CchHHHHHHhhhh-cCCCCC---CCCCHHHHHHHHHhCCCeEEEEEec
Q 018194 237 ENKEHVDIIQGIE-RGDALP---GLRSYAEITEIAKRVGFEVVKEKDL 280 (359)
Q Consensus 237 ~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~aGF~~i~~~~~ 280 (359)
...........+. .+..+. .+.+.++..+.|.++||+.+...++
T Consensus 262 ~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 262 FEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp TSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred CChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 1111111222221 122222 4557899999999999998877665
No 353
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.41 E-value=0.079 Score=47.36 Aligned_cols=96 Identities=25% Similarity=0.351 Sum_probs=66.2
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-------- 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------- 185 (359)
....+.++.+||-.|+ |.|..+..+++..|++|+++|.+++.++.+++. +.. ..+ |..+..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~~---~~~--d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GCH---HTI--NYSTQDFAEVVREI 209 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCHHHHHHHHHH
Confidence 3557889999999995 567777777776788999999999888877653 321 122 222211
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.....+|+|+.+..- ..++.+.++|+|||+++++.
T Consensus 210 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 210 TGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp HTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECC
T ss_pred hCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 112368998865432 45678889999999998753
No 354
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.35 E-value=0.14 Score=46.63 Aligned_cols=51 Identities=18% Similarity=0.153 Sum_probs=37.4
Q ss_pred HhcCCCCCCEEEEECCCCChHHHHHHhh--------cCCEEEEEeCCHHHHHHHHHHHH
Q 018194 116 DLIDVKAGDRILDVGCGVGGPMRAIAAH--------SRANVVGITINEYQVNRARLHNK 166 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~--------~~~~v~g~D~s~~~~~~a~~~~~ 166 (359)
+.+..+...+|+|+|+|.|.++..+.+. ...+++.||+|+...+.-+++..
T Consensus 74 ~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 74 KAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp HHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred HHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3444445568999999999998877642 12489999999998876555543
No 355
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.33 E-value=0.066 Score=48.61 Aligned_cols=97 Identities=21% Similarity=0.233 Sum_probs=66.8
Q ss_pred HhcCCC-----CCCEEEEEC-CC-CChHHHHHHhh-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---
Q 018194 116 DLIDVK-----AGDRILDVG-CG-VGGPMRAIAAH-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM--- 184 (359)
Q Consensus 116 ~~~~~~-----~~~~vLDiG-cG-~G~~~~~l~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--- 184 (359)
....+. ++.+||-+| +| .|..+..+++. .+++|+++|.+++.++.+++ .|.. .++... .++
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~-~~~~~~ 231 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVIDHS-KPLAAE 231 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEECTT-SCHHHH
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEEeCC-CCHHHH
Confidence 455666 788999998 55 47888888886 58899999999998888765 2321 222111 111
Q ss_pred --CCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 185 --PFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 185 --~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
....+.+|+|+-.-. -...+..+.++|+|||+++++
T Consensus 232 v~~~~~~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 232 VAALGLGAPAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHTTCSCCEEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHhcCCCceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 122357898876432 345778899999999999975
No 356
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.25 E-value=0.056 Score=48.88 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=64.9
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-------- 185 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------- 185 (359)
....+.++.+||-.|+ |.|..+..+++..|++|+++|.+++.++.+++. +.. ..+ |..+..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~--~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA---AGF--NYKKEDFSEATLKF 226 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCc---EEE--ecCChHHHHHHHHH
Confidence 4567889999999984 356667777776789999999999988877543 221 122 222111
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.....+|+|+.+..- ..+....++|++||+++++.
T Consensus 227 ~~~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 227 TKGAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TTTSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEECC
T ss_pred hcCCCceEEEECCCc-------hHHHHHHHhccCCCEEEEEe
Confidence 112468998865542 14677889999999998753
No 357
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.23 E-value=0.025 Score=51.22 Aligned_cols=95 Identities=11% Similarity=0.095 Sum_probs=64.6
Q ss_pred hcCCCCC------CEEEEECCCC-ChHH-HHHH-hhcCCE-EEEEeCCHH---HHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 018194 117 LIDVKAG------DRILDVGCGV-GGPM-RAIA-AHSRAN-VVGITINEY---QVNRARLHNKKAGLDSLCEVVCGNFLK 183 (359)
Q Consensus 117 ~~~~~~~------~~vLDiGcG~-G~~~-~~l~-~~~~~~-v~g~D~s~~---~~~~a~~~~~~~~~~~~i~~~~~d~~~ 183 (359)
...+++| .+||-+|+|. |..+ ..++ +..|++ |+++|.+++ .++.+++. | .+.+ |..+
T Consensus 161 ~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l----G----a~~v--~~~~ 230 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL----D----ATYV--DSRQ 230 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT----T----CEEE--ETTT
T ss_pred hcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc----C----Cccc--CCCc
Confidence 3455678 9999999864 6777 8888 777876 999999988 77777542 3 2222 3322
Q ss_pred CCCC-----CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 184 MPFE-----DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 184 ~~~~-----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
..+. .+.+|+|+-.-. -...++.+.++|+|||+++++-
T Consensus 231 ~~~~~i~~~~gg~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 231 TPVEDVPDVYEQMDFIYEATG------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp SCGGGHHHHSCCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECC
T ss_pred cCHHHHHHhCCCCCEEEECCC------ChHHHHHHHHHHhcCCEEEEEe
Confidence 1111 136898875432 1346788899999999998753
No 358
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.22 E-value=0.025 Score=51.82 Aligned_cols=99 Identities=19% Similarity=0.110 Sum_probs=66.8
Q ss_pred HhcC-CCCCCEEEEECCCC-ChHHHHHHhhcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC---CCCC-----
Q 018194 116 DLID-VKAGDRILDVGCGV-GGPMRAIAAHSR-ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGN---FLKM----- 184 (359)
Q Consensus 116 ~~~~-~~~~~~vLDiGcG~-G~~~~~l~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~~----- 184 (359)
.... +.+|.+||-+|+|. |..+..+++..| .+|+++|.+++.++.+++ .|.. .++..+ -.++
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHH
Confidence 4457 78999999999763 677788888778 599999999998888764 2321 222221 0010
Q ss_pred C-CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 185 P-FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 185 ~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
. .....+|+|+-.-.. ...+....++|+|||+++++-
T Consensus 261 ~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 261 DITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 0 112369998865421 235678889999999998753
No 359
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.20 E-value=0.017 Score=52.19 Aligned_cols=70 Identities=19% Similarity=0.244 Sum_probs=53.5
Q ss_pred CEEEEECCCCChHHHHHHhhc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEEecc
Q 018194 124 DRILDVGCGVGGPMRAIAAHS--RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---FEDNHFDGAYSIE 198 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~~ 198 (359)
.+|+|+.||.|.++..+.+.. -..|.++|+++..++..+.++. +..++.+|+.++. ++...+|+|+...
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 589999999999999988752 1368999999999999888753 3457788988764 1112589998865
Q ss_pred c
Q 018194 199 A 199 (359)
Q Consensus 199 ~ 199 (359)
-
T Consensus 77 P 77 (343)
T 1g55_A 77 P 77 (343)
T ss_dssp C
T ss_pred C
Confidence 4
No 360
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.18 E-value=0.039 Score=49.68 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=66.4
Q ss_pred CCCCCCEEEEECCCC-ChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCc
Q 018194 119 DVKAGDRILDVGCGV-GGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FEDNH 190 (359)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 190 (359)
.+.++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++. |.. .++..+- +.. .....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----Ga~---~~i~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----GAD---AAVKSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----TCS---EEEECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCCC-cHHHHHHHHhCCCC
Confidence 678899999999875 77888888865 68999999999998887653 322 2222211 110 01236
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+|+-.-. -...++.+.+.|+|||+++++.
T Consensus 240 ~d~v~d~~G------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDFVG------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEESSC------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CeEEEECCC------CHHHHHHHHHHHhcCCEEEEEC
Confidence 888876432 2347888999999999999864
No 361
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.13 E-value=0.034 Score=50.40 Aligned_cols=99 Identities=17% Similarity=0.104 Sum_probs=65.8
Q ss_pred hcCCCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CC--CCCCCccc
Q 018194 117 LIDVKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFL-KM--PFEDNHFD 192 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~-~~--~~~~~~fD 192 (359)
...+.++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++. |.. .++..+-. +. ... +.+|
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 174 RNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GAD---HYIATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp HTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEEGGGTSCHHHHSC-SCEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCcCchHHHHHhh-cCCC
Confidence 36788999999999864 6777888887788999999999988887653 321 22222111 10 011 4799
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+-.-... ....++.+.++|+|||+++.+.
T Consensus 246 ~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 246 LIVVCASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEECCSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred EEEECCCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 998654320 0123456788999999998753
No 362
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=95.07 E-value=0.015 Score=51.98 Aligned_cols=97 Identities=19% Similarity=0.262 Sum_probs=64.6
Q ss_pred hcCCCCCC-EEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccc
Q 018194 117 LIDVKAGD-RILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-PFEDNHFD 192 (359)
Q Consensus 117 ~~~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD 192 (359)
...+.++. +||=.|+ |.|..+..+++..|++|++++.+++.++.+++. |.. ..+-..+.... ....+.+|
T Consensus 140 ~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~~~~~d 213 (324)
T 3nx4_A 140 DAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN--RILSRDEFAESRPLEKQLWA 213 (324)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS--EEEEGGGSSCCCSSCCCCEE
T ss_pred hcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC--EEEecCCHHHHHhhcCCCcc
Confidence 34455532 4999997 357788889988889999999999988888763 321 11111121111 12335789
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+|+-.-. . ..+..+.++|+|+|+++++
T Consensus 214 ~v~d~~g-----~--~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 214 GAIDTVG-----D--KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEEESSC-----H--HHHHHHHHTEEEEEEEEEC
T ss_pred EEEECCC-----c--HHHHHHHHHHhcCCEEEEE
Confidence 8765432 1 3788999999999999875
No 363
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.05 E-value=0.041 Score=49.12 Aligned_cols=56 Identities=9% Similarity=0.123 Sum_probs=44.7
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAG 169 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~ 169 (359)
+.+++.. ..+|..|||.-||+|..+....+ .+.+.+|+|+++..++.+++++...+
T Consensus 243 ~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~-~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 243 EFFIRML-TEPDDLVVDIFGGSNTTGLVAER-ESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HHHHHHH-CCTTCEEEETTCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred HHHHHHh-CCCCCEEEECCCCCCHHHHHHHH-cCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 3344433 36789999999999998877666 47899999999999999999876544
No 364
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.88 E-value=0.091 Score=51.96 Aligned_cols=126 Identities=12% Similarity=0.197 Sum_probs=78.9
Q ss_pred CCCEEEEECCCCChHHHHHHhh-----------cC--CEEEEEeC---CHHHHHHHHH-----------HHHHcCC--C-
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH-----------SR--ANVVGITI---NEYQVNRARL-----------HNKKAGL--D- 171 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~-----------~~--~~v~g~D~---s~~~~~~a~~-----------~~~~~~~--~- 171 (359)
+.-+|||+|-|+|.......+. .. .++++++. +++.+..+-. ....... +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 3469999999999866544321 11 46899998 7777764433 1221111 0
Q ss_pred ----------CCeEEEEcCCCCC-C-CC---CCccceEEeccccccc-CC--HHHHHHHHHhccCCCCEEEEEEeeeCcc
Q 018194 172 ----------SLCEVVCGNFLKM-P-FE---DNHFDGAYSIEATCHA-PK--LEDVYAEVFRVLKPGSLYVSYEWVTTDK 233 (359)
Q Consensus 172 ----------~~i~~~~~d~~~~-~-~~---~~~fD~v~~~~~l~~~-~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 233 (359)
..+++..+|+.+. + +. ...||+++....-... |+ -..+++.+.++++|||.+....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC------
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 1244566666542 2 11 3679999885422111 22 3588999999999999987420
Q ss_pred cccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 018194 234 YEAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEK 278 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~i~~~ 278 (359)
....+++.|+++||.+....
T Consensus 220 -------------------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 -------------------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp -------------------------CCHHHHHHHHHHTCEEEEEE
T ss_pred -------------------------CcHHHHHHHHhCCeEEEecc
Confidence 11478888999999987654
No 365
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.86 E-value=0.059 Score=47.95 Aligned_cols=56 Identities=18% Similarity=0.184 Sum_probs=42.7
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCH---HHHHHHHHHHHHcC
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINE---YQVNRARLHNKKAG 169 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~---~~~~~a~~~~~~~~ 169 (359)
+.++... ..+|..|||.-||+|..+....+. +.+.+|+|+++ ..++.+++++...+
T Consensus 233 ~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 233 ERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 3344443 357899999999999988877764 78999999999 99999999876543
No 366
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.85 E-value=0.0035 Score=56.59 Aligned_cols=94 Identities=20% Similarity=0.172 Sum_probs=64.0
Q ss_pred hcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-------C
Q 018194 117 LIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF-------E 187 (359)
Q Consensus 117 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-------~ 187 (359)
...+ ++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. . + .++ |..+..+ .
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~--~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLV--NPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEE--CTTTSCHHHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hcc--CcCccCHHHHHHHhc
Confidence 5677 899999999863 6677788887788 999999999887766442 1 1 121 2211110 1
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+|+|+-.-. ....++...+.|+|||+++++-
T Consensus 229 ~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSG------NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEe
Confidence 236899876432 1356788899999999998753
No 367
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.65 E-value=0.085 Score=47.89 Aligned_cols=87 Identities=14% Similarity=0.026 Sum_probs=59.1
Q ss_pred CCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCH---HHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------CCccc
Q 018194 123 GDRILDVGCGV-GGPMRAIAAHSRANVVGITINE---YQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE------DNHFD 192 (359)
Q Consensus 123 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~fD 192 (359)
+.+||-+|+|. |..+..+++..|++|+++|.++ +.++.+++. | .+.+ | .+ .+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----g----a~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----K----TNYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----T----CEEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----C----Ccee--c-hH-HHHHHHHHhCCCCC
Confidence 99999999843 5566667776688999999998 777766543 3 2222 3 22 211 14689
Q ss_pred eEEecccccccCCHHHHH-HHHHhccCCCCEEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVY-AEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l-~~~~~~LkpgG~l~~~~ 227 (359)
+|+..-... ..+ +.+.+.|+|||+++++.
T Consensus 249 ~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGAD------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCCC------THHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCCh------HHHHHHHHHHHhcCCEEEEEe
Confidence 988654321 245 78899999999998753
No 368
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.61 E-value=0.19 Score=44.97 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=66.5
Q ss_pred HHHhcCCCCCCEEEEECCCC-ChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------
Q 018194 114 AVDLIDVKAGDRILDVGCGV-GGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------ 185 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------ 185 (359)
........++.+||=.|+|. |.++..+++..++ .++++|.+++.++.+++. |-. ..+..+-.+.+
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~---~~i~~~~~~~~~~~~~~ 224 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAM---QTFNSSEMSAPQMQSVL 224 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCe---EEEeCCCCCHHHHHHhh
Confidence 44556778999999999975 5567777776665 568999999988887653 322 22222211111
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
-....+|+|+-.-. -...++...++|+|||.+++.-
T Consensus 225 ~~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 225 RELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp GGGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECC
T ss_pred cccCCccccccccc------ccchhhhhhheecCCeEEEEEe
Confidence 11245677765332 2456788899999999998753
No 369
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.57 E-value=0.098 Score=47.23 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=66.5
Q ss_pred HHHhcCCCCC--CEEEEECC--CCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---
Q 018194 114 AVDLIDVKAG--DRILDVGC--GVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--- 185 (359)
Q Consensus 114 ~~~~~~~~~~--~~vLDiGc--G~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--- 185 (359)
+.....+.++ .+||-.|+ |.|..+..+++..|+ +|+++|.+++.++.+++. .|.. ..+ |..+..
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~~~~ 221 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD---AAI--NYKKDNVAE 221 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS---EEE--ETTTSCHHH
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCchHHHH
Confidence 3355678889 99999998 345666677776788 999999998877766542 2321 122 222211
Q ss_pred ----CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 ----FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+.+|+++.+.. ...++.+.++|++||+++++.
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 11126898886553 256888999999999998753
No 370
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.48 E-value=0.44 Score=42.38 Aligned_cols=124 Identities=11% Similarity=0.117 Sum_probs=76.2
Q ss_pred CEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-CCccceEEeccccc
Q 018194 124 DRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFE-DNHFDGAYSIEATC 201 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~v~~~~~l~ 201 (359)
++|||+-||.|.++.-+.+. |. .+.++|+++..++..+.++ + -.++.+|+.++... -...|+++...--.
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 58999999999999888764 54 4568999999888777664 2 36788999886421 13579887654222
Q ss_pred c---------cCCH-HHHHH---HHHhccCCCCEEEEEEeeeCcccccCchHHHHHHhhhhcCCCCCCCCCHHHHHHHHH
Q 018194 202 H---------APKL-EDVYA---EVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQGIERGDALPGLRSYAEITEIAK 268 (359)
Q Consensus 202 ~---------~~~~-~~~l~---~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (359)
. ..|. ..++. ++.+.++|. +++.|-+..-.... .-.....+.+.|+
T Consensus 73 ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~~~-------------------~~~~~~~i~~~l~ 131 (331)
T 3ubt_Y 73 SWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMAQR-------------------HNKAVQEFIQEFD 131 (331)
T ss_dssp GTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGGCT-------------------TSHHHHHHHHHHH
T ss_pred CcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeeccccccc-------------------ccchhhhhhhhhc
Confidence 1 1232 23333 344556884 55555433210000 0112356778888
Q ss_pred hCCCeEEE
Q 018194 269 RVGFEVVK 276 (359)
Q Consensus 269 ~aGF~~i~ 276 (359)
+.||.+..
T Consensus 132 ~~GY~v~~ 139 (331)
T 3ubt_Y 132 NAGYDVHI 139 (331)
T ss_dssp HHTEEEEE
T ss_pred cCCcEEEE
Confidence 99997643
No 371
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.38 E-value=0.094 Score=47.14 Aligned_cols=94 Identities=23% Similarity=0.189 Sum_probs=65.7
Q ss_pred HhcCCCCCCEEEEECC-C-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CC
Q 018194 116 DLIDVKAGDRILDVGC-G-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------FE 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 187 (359)
+...+.++.+||-+|+ | .|..+..+++..|++|+++ .+++.++.+++. |. ..+. +-.+.. ..
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga----~~i~-~~~~~~~~~~~~~~ 213 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GA----TPID-ASREPEDYAAEHTA 213 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TS----EEEE-TTSCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CC----CEec-cCCCHHHHHHHHhc
Confidence 5667889999999994 3 4778888888778999999 888888777653 32 2222 221111 12
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
...+|+|+-.-. . ..+....+.|+|||+++++
T Consensus 214 ~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 214 GQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEE
Confidence 246899876433 1 4678888999999999874
No 372
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.31 E-value=0.097 Score=46.75 Aligned_cols=67 Identities=18% Similarity=0.134 Sum_probs=49.8
Q ss_pred CCEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEecc
Q 018194 123 GDRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF-EDNHFDGAYSIE 198 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~v~~~~ 198 (359)
+.+++|+.||.|.++..+.+. |. .+.++|+++..++..+.++... . .+|+.++.. .-..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~------~--~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK------P--EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC------C--BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC------C--cCCHHHcCHhhCCCCCEEEECC
Confidence 469999999999999998875 44 5778999999999888876321 1 577776531 113589998754
No 373
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.24 E-value=0.013 Score=51.84 Aligned_cols=93 Identities=13% Similarity=0.083 Sum_probs=62.4
Q ss_pred CCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCCCCCCCccceEEe
Q 018194 120 VKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF-LKMPFEDNHFDGAYS 196 (359)
Q Consensus 120 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~fD~v~~ 196 (359)
+++|.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++ .|.. ..+..+- .+..-.-+.+|+|+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHhcCceEEEE
Confidence 788999999998 35677788888778999999999988877754 2321 2222110 111000046899887
Q ss_pred cccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 197 IEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 197 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
..- ..++...+.|+|||+++.+.
T Consensus 196 -~g~-------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 196 -VRG-------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp -CSC-------TTHHHHHTTEEEEEEEEEC-
T ss_pred -CCH-------HHHHHHHHhhccCCEEEEEe
Confidence 321 25678899999999998753
No 374
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.23 E-value=0.15 Score=45.33 Aligned_cols=96 Identities=18% Similarity=0.165 Sum_probs=62.8
Q ss_pred HhcCCCCCCEEEEEC-CC-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCCCCccc
Q 018194 116 DLIDVKAGDRILDVG-CG-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MPFEDNHFD 192 (359)
Q Consensus 116 ~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD 192 (359)
+...+.+|.+||=+| +| .|..+..+++..|++|++++ ++..++.+++ .|.. .++..+-.+ ..-.-..+|
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSCEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhhccCCC
Confidence 667889999999997 55 47788888887789999998 5554665554 3432 222222111 110114689
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+|+-.-. -. .+....++|+|||+++.+
T Consensus 218 ~v~d~~g------~~-~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVIDLVG------GD-VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEESSC------HH-HHHHHGGGEEEEEEEEEC
T ss_pred EEEECCC------cH-HHHHHHHhccCCCEEEEe
Confidence 8876432 12 237889999999999874
No 375
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.16 E-value=0.038 Score=50.08 Aligned_cols=99 Identities=19% Similarity=0.107 Sum_probs=62.7
Q ss_pred hcCCC-CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCCCCccce
Q 018194 117 LIDVK-AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLK-MPFEDNHFDG 193 (359)
Q Consensus 117 ~~~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~ 193 (359)
...+. +|.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. .|.. .++..+-.+ +.-..+.+|+
T Consensus 174 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~---~vi~~~~~~~~~~~~~g~D~ 247 (357)
T 2cf5_A 174 HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGAD---DYVIGSDQAKMSELADSLDY 247 (357)
T ss_dssp HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCS---CEEETTCHHHHHHSTTTEEE
T ss_pred hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCc---eeeccccHHHHHHhcCCCCE
Confidence 45677 899999999863 6677778877788999999998877766522 2321 122111000 0001136899
Q ss_pred EEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+-.-.-. ..++...++|+|||+++.+.
T Consensus 248 vid~~g~~------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 248 VIDTVPVH------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEECCCSC------CCSHHHHTTEEEEEEEEECS
T ss_pred EEECCCCh------HHHHHHHHHhccCCEEEEeC
Confidence 87644321 12456778999999998753
No 376
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.15 E-value=0.17 Score=47.41 Aligned_cols=96 Identities=17% Similarity=0.245 Sum_probs=66.6
Q ss_pred cCCCCCCEEEEECC-C-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------
Q 018194 118 IDVKAGDRILDVGC-G-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---------- 185 (359)
Q Consensus 118 ~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---------- 185 (359)
..+++|.+||=+|+ | .|..+..+++..|+++++++.++..++.+++. |.. .++...-.+..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE---AIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC---EEEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc---EEEecCcCcccccccccccch
Confidence 57789999999997 4 47788888887889999999999988887653 321 22221111110
Q ss_pred -------------CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 -------------FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 -------------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.....+|+|+-.-. . ..+....++|+|||+++++-
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG-----R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC-----H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC-----c--hhHHHHHHHhhCCcEEEEEe
Confidence 11247898876432 1 56788899999999999753
No 377
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.00 E-value=0.046 Score=49.71 Aligned_cols=99 Identities=19% Similarity=0.198 Sum_probs=62.2
Q ss_pred hcCCC-CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CCCCCCCccce
Q 018194 117 LIDVK-AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFL-KMPFEDNHFDG 193 (359)
Q Consensus 117 ~~~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~fD~ 193 (359)
...+. ++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++. .|.. .++..+-. .+.-..+.+|+
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~---~v~~~~~~~~~~~~~~~~D~ 254 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGAD---SFLVSRDQEQMQAAAGTLDG 254 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCS---EEEETTCHHHHHHTTTCEEE
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCc---eEEeccCHHHHHHhhCCCCE
Confidence 45667 899999999863 5667777777789999999999877766532 2321 22211100 00000136899
Q ss_pred EEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+..-.... .++...+.|++||+++.+.
T Consensus 255 vid~~g~~~------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 255 IIDTVSAVH------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEECCSSCC------CSHHHHHHEEEEEEEEECC
T ss_pred EEECCCcHH------HHHHHHHHHhcCCEEEEEc
Confidence 886543221 2356678899999998753
No 378
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.98 E-value=0.04 Score=49.21 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=62.9
Q ss_pred hcCCCCCC-EEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccc
Q 018194 117 LIDVKAGD-RILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-PFEDNHFD 192 (359)
Q Consensus 117 ~~~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD 192 (359)
...+.++. +||-+|+ |.|..+..+++..|++|++++.+++.++.+++ .|...-+.....+.... ....+.+|
T Consensus 143 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~d 218 (328)
T 1xa0_A 143 EHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAKEVLAREDVMAERIRPLDKQRWA 218 (328)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCSEEEECC---------CCSCCEE
T ss_pred hcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCcEEEecCCcHHHHHHHhcCCccc
Confidence 34677775 8999997 35778888888778999999999888777754 23211111111110000 12234689
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+|+-.-. . ..+....+.|++||+++++
T Consensus 219 ~vid~~g-----~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 219 AAVDPVG-----G--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEECST-----T--TTHHHHHHTEEEEEEEEEC
T ss_pred EEEECCc-----H--HHHHHHHHhhccCCEEEEE
Confidence 8876543 1 2467888999999999875
No 379
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.56 E-value=0.041 Score=49.16 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=64.9
Q ss_pred hcCCCCCC-EEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccc
Q 018194 117 LIDVKAGD-RILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-PFEDNHFD 192 (359)
Q Consensus 117 ~~~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD 192 (359)
...+.++. +||-+|+ |.|..+..+++..|++|++++.+++.++.+++. |...-+.....+.... ....+.+|
T Consensus 144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga~~v~~~~~~~~~~~~~~~~~~~d 219 (330)
T 1tt7_A 144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GASEVISREDVYDGTLKALSKQQWQ 219 (330)
T ss_dssp HTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCSEEEEHHHHCSSCCCSSCCCCEE
T ss_pred hcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCcEEEECCCchHHHHHHhhcCCcc
Confidence 34677775 8999997 356777888887788999999998888777653 3211011101111111 12234689
Q ss_pred eEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 193 GAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 193 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+-.-. . ..+....++|+|||+++++-
T Consensus 220 ~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 220 GAVDPVG-----G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEESCC-----T--HHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCc-----H--HHHHHHHHhhcCCCEEEEEe
Confidence 8876432 2 36788999999999998753
No 380
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.53 E-value=0.38 Score=44.37 Aligned_cols=45 Identities=13% Similarity=0.160 Sum_probs=35.7
Q ss_pred CCEEEEECCCCChHHHHHHhh---c---CCEEEEEeCCHHHHHHHHHHHHH
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---S---RANVVGITINEYQVNRARLHNKK 167 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~---~~~v~g~D~s~~~~~~a~~~~~~ 167 (359)
..+|+|+|+|+|.++..+.+. . ..+++.||+|+.+.+.-+++...
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 469999999999988887652 1 24899999999988777776654
No 381
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.40 E-value=0.34 Score=43.36 Aligned_cols=100 Identities=20% Similarity=0.169 Sum_probs=63.6
Q ss_pred HHhcCCCCCCEEEEECCCCC-hHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------C
Q 018194 115 VDLIDVKAGDRILDVGCGVG-GPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP------F 186 (359)
Q Consensus 115 ~~~~~~~~~~~vLDiGcG~G-~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~ 186 (359)
++....++|.+||=+|+|.+ ..+..+++ ..+++|+++|.+++.++.+++. |-. ..+...-.+.. .
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~---~~i~~~~~~~~~~v~~~t 228 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GAD---VTINSGDVNPVDEIKKIT 228 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCS---EEEEC-CCCHHHHHHHHT
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCe---EEEeCCCCCHHHHhhhhc
Confidence 34557889999999999864 45555555 4578999999999988776654 221 22221111110 1
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
....+|.++.... -...+....+.|++||++++.-
T Consensus 229 ~g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 229 GGLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp TSSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEEecc------CcchhheeheeecCCceEEEEe
Confidence 1234566554321 2456788899999999998753
No 382
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.17 E-value=0.45 Score=36.39 Aligned_cols=88 Identities=17% Similarity=0.062 Sum_probs=56.8
Q ss_pred CCEEEEECCCCChHHHHHHh---hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 018194 123 GDRILDVGCGVGGPMRAIAA---HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGAY 195 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~ 195 (359)
..+|+=+|||. ++..+++ ..+.+|+++|.+++.++.+++. .+.++.+|..+.. ..-..+|+|+
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~--------g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASDIPLVVIETSRTRVDELRER--------GVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc--------CCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 35788899864 4444443 3478999999999988876541 3578899987632 1224678887
Q ss_pred ecccccccCCH--HHHHHHHHhccCCCCEEEE
Q 018194 196 SIEATCHAPKL--EDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 196 ~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~ 225 (359)
+.. ++. ...+-...+.+.|+..++.
T Consensus 77 ~~~-----~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 77 LTI-----PNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEC-----CChHHHHHHHHHHHHHCCCCeEEE
Confidence 643 222 2223445666788887765
No 383
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.11 E-value=0.29 Score=45.68 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=65.8
Q ss_pred cCCCCCCEEEEECC-C-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----------
Q 018194 118 IDVKAGDRILDVGC-G-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM----------- 184 (359)
Q Consensus 118 ~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~----------- 184 (359)
..+.+|.+||-.|+ | .|..+..+++..|+++++++.+++.++.+++ .|...-+.....|..+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchh
Confidence 67889999999997 3 4677788888778999999999998887754 23221111111121100
Q ss_pred ---------CCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 185 ---------PFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 185 ---------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
......+|+|+-.-.- ..++...++|++||+++++.
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESC
T ss_pred hhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEe
Confidence 0012468998765431 36788889999999999853
No 384
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.02 E-value=1.6 Score=40.97 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=43.2
Q ss_pred CCEEEEECCCCChHHHHHHhhcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 018194 123 GDRILDVGCGVGGPMRAIAAHSRA-NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM 184 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 184 (359)
..+++|+-||.|.++.-+.+. |. .|.++|+++..++..+.++.. .+...++.+|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhh
Confidence 368999999999999888774 44 578999999988877665421 12346677888764
No 385
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.90 E-value=0.056 Score=49.30 Aligned_cols=94 Identities=21% Similarity=0.197 Sum_probs=60.4
Q ss_pred CCCCCEEEEEC-CC-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceE
Q 018194 120 VKAGDRILDVG-CG-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---FEDNHFDGA 194 (359)
Q Consensus 120 ~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v 194 (359)
+.+|.+||-.| +| .|..+..+++..|++|++++ ++..++.+++ .|.. .++..+-.+.. .....+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGAD---DVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCCC---EEEECCchHHHHHHhhcCCCCEE
Confidence 77899999999 34 47788888887789999998 6666666543 3321 22221111110 011468988
Q ss_pred EecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 195 YSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 195 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+-.-. .....+....++|++||+++.+
T Consensus 253 id~~g-----~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 LDNVG-----GSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp EESSC-----TTHHHHGGGGBCSSSCCEEEES
T ss_pred EECCC-----ChhhhhHHHHHhhcCCcEEEEe
Confidence 76432 2224567788899999999874
No 386
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=92.85 E-value=0.6 Score=41.98 Aligned_cols=97 Identities=20% Similarity=0.278 Sum_probs=57.1
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEE-eCCHH---HHHHHHHHHHHcCCCCCeEEEEc------CCCC
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGI-TINEY---QVNRARLHNKKAGLDSLCEVVCG------NFLK 183 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~-D~s~~---~~~~a~~~~~~~~~~~~i~~~~~------d~~~ 183 (359)
....+.+|.+||-+|+ |.|..+..+++..|++++++ +.++. ..+.++ +.|.. .++.. ++.+
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE---HVITEEELRRPEMKN 233 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS---EEEEHHHHHSGGGGG
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc---EEEecCcchHHHHHH
Confidence 3457889999999997 35778888888778877665 44332 233333 33422 22221 1111
Q ss_pred CCCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 184 MPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 184 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
..-..+.+|+|+-.-. . .. +.+..++|+|||+++++
T Consensus 234 ~~~~~~~~Dvvid~~g-----~-~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 234 FFKDMPQPRLALNCVG-----G-KS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp TTSSSCCCSEEEESSC-----H-HH-HHHHHTTSCTTCEEEEC
T ss_pred HHhCCCCceEEEECCC-----c-HH-HHHHHHhhCCCCEEEEE
Confidence 1111124898875432 1 12 24578999999999875
No 387
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.63 E-value=0.069 Score=48.44 Aligned_cols=99 Identities=17% Similarity=0.082 Sum_probs=57.4
Q ss_pred CCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccccc
Q 018194 123 GDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATC 201 (359)
Q Consensus 123 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 201 (359)
+.+|+=+|+|. |..+..++...|++|+++|.++..++.+++.... .+.....+..++.-.-..+|+|+..-...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 48999999863 4444455555678999999999988877665432 12222211111100012579998755433
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 202 HAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 202 ~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
..+.+.-+.++..+.++|||.++.+
T Consensus 242 ~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 242 GRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp TSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred CCCCCeecCHHHHhhCCCCCEEEEE
Confidence 2111111234567889999988753
No 388
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.58 E-value=0.52 Score=42.69 Aligned_cols=92 Identities=15% Similarity=0.117 Sum_probs=61.4
Q ss_pred CCCCEEEEECCC--CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCccce
Q 018194 121 KAGDRILDVGCG--VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FEDNHFDG 193 (359)
Q Consensus 121 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~ 193 (359)
.+|.+||=+|++ .|..+..+++..|++|+++. ++..++.+++ .|.. .++...-.++. ...+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGAE---EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCCc---EEEECCCchHHHHHHHHccCCccE
Confidence 789999999983 67888889988889999885 8887776654 3321 23322211110 11245898
Q ss_pred EEecccccccCCHHHHHHHHHhcc-CCCCEEEEE
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVL-KPGSLYVSY 226 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~L-kpgG~l~~~ 226 (359)
|+-.-. -...+..+.+.| ++||+++++
T Consensus 235 v~d~~g------~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 ALDCIT------NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEESSC------SHHHHHHHHHHSCTTCEEEEES
T ss_pred EEECCC------chHHHHHHHHHhhcCCCEEEEE
Confidence 875432 235577788888 699999875
No 389
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.35 E-value=0.075 Score=48.53 Aligned_cols=100 Identities=16% Similarity=0.080 Sum_probs=56.1
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
++.+|+=+|+|. |.....+++..|++|+++|.++..++.+++.. +. .+.....+..++.-.-...|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999853 44444444456889999999998877765532 21 1211111111110001257988874322
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.....+.-+.++..+.+||||.++.+
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEE
Confidence 21111111245677889999988753
No 390
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.20 E-value=0.21 Score=44.65 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=50.9
Q ss_pred CEEEEECCCCChHHHHHHhhcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEEec
Q 018194 124 DRILDVGCGVGGPMRAIAAHSR---ANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---FEDNHFDGAYSI 197 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~~~---~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~ 197 (359)
.+++|+-||.|.++..+.+. | ..|.++|+++..++..+.++. ...+..+|+.++. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEec
Confidence 48999999999999888764 3 357799999999888777652 2456788888764 222368999865
Q ss_pred c
Q 018194 198 E 198 (359)
Q Consensus 198 ~ 198 (359)
.
T Consensus 77 p 77 (333)
T 4h0n_A 77 P 77 (333)
T ss_dssp C
T ss_pred C
Confidence 4
No 391
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=91.88 E-value=0.61 Score=40.81 Aligned_cols=71 Identities=10% Similarity=0.082 Sum_probs=52.4
Q ss_pred CCCCEEEEECCCCChHHHHHHhhcCCE---EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CC-CCccce
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAHSRAN---VVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP---FE-DNHFDG 193 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~~~~~---v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~-~~~fD~ 193 (359)
....+++|+-||.|.++..+.+. |.+ |.++|+++..++..+.+.. ...+..+|+.++. ++ .+.+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCE
Confidence 45679999999999999888774 443 5899999998887666532 3467889998764 11 136899
Q ss_pred EEecc
Q 018194 194 AYSIE 198 (359)
Q Consensus 194 v~~~~ 198 (359)
++...
T Consensus 87 l~ggp 91 (295)
T 2qrv_A 87 VIGGS 91 (295)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98653
No 392
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=91.74 E-value=1.8 Score=39.18 Aligned_cols=98 Identities=12% Similarity=0.028 Sum_probs=65.6
Q ss_pred CCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS-LCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.+.+||.++.+.|.++..++.. .++.+.-|--.....+.+.+..++++ ++++... ..+ ....||+|+....
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~---~~~~~~~v~~~lp- 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD---YPQQPGVVLIKVP- 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC---CCSSCSEEEEECC-
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc---cccCCCEEEEEcC-
Confidence 4568999999999999988764 33445335544455566677777654 3555432 222 2367999887442
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+.......|..+...|+||+.+++..
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 223346778899999999999997653
No 393
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.70 E-value=0.071 Score=46.93 Aligned_cols=54 Identities=22% Similarity=0.357 Sum_probs=39.8
Q ss_pred CeEEEEcCCCC-CC-CCCCccceEEeccccccc--------------------CCHHHHHHHHHhccCCCCEEEEE
Q 018194 173 LCEVVCGNFLK-MP-FEDNHFDGAYSIEATCHA--------------------PKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 173 ~i~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
++.++++|+.+ +. +++++||+|+++--.... .....+++++.++|||||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 57899999877 22 567899999997544321 11345788999999999999874
No 394
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.50 E-value=1.4 Score=38.91 Aligned_cols=79 Identities=11% Similarity=-0.015 Sum_probs=54.6
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-----ED 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 188 (359)
.+.+||=.|++.| ++..+++. .|.+|++++.++..++...+.....+...++.++..|+.+.. + ..
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 3668888887755 44444431 478999999999988877776665543347899999998742 0 01
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+++.+..+.
T Consensus 86 g~id~lv~nAg~~ 98 (319)
T 3ioy_A 86 GPVSILCNNAGVN 98 (319)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4679998877654
No 395
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.41 E-value=0.12 Score=47.11 Aligned_cols=100 Identities=17% Similarity=0.097 Sum_probs=54.3
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
++++|+=+|+|. |.....++...|++|+++|.++..++.+++.. +. .+.....+..++.-.-..+|+|+..-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 458999999852 33333344446889999999998777665432 21 1222111111111001357988775443
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.....+.-+.+++.+.+||||.++.+
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEEC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEE
Confidence 21111111246777889999988753
No 396
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.78 E-value=0.83 Score=36.53 Aligned_cols=90 Identities=16% Similarity=0.137 Sum_probs=54.1
Q ss_pred CCEEEEECCCCChHHHHHHh---hc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----C-CCCccce
Q 018194 123 GDRILDVGCGVGGPMRAIAA---HS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----F-EDNHFDG 193 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~---~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~-~~~~fD~ 193 (359)
+++|+=+||| ..+..+++ .. +.+|+++|.+++.++.+++ .+ +.++.+|..+.. . .-..+|+
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCE
Confidence 5689999875 44444443 34 7899999999988776543 22 456777775421 1 2346888
Q ss_pred EEecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
|+.... . +.....+-...+.+.|++.++.
T Consensus 109 vi~~~~--~-~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 109 VLLAMP--H-HQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp EEECCS--S-HHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEEeCC--C-hHHHHHHHHHHHHHCCCCEEEE
Confidence 887431 0 1122233345556677777765
No 397
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=90.74 E-value=0.17 Score=45.83 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=59.1
Q ss_pred cCCCCC-CEEEEECC-C-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC---CCCC-----C
Q 018194 118 IDVKAG-DRILDVGC-G-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF---LKMP-----F 186 (359)
Q Consensus 118 ~~~~~~-~~vLDiGc-G-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~---~~~~-----~ 186 (359)
..+.+| .+||-+|+ | .|..+..+++..|++++++.-+++.+...++.+.+.|.. .++..+- .++. .
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHH
Confidence 477889 99999997 3 477888888877889988875554321111222233422 2222110 1110 0
Q ss_pred ---CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 187 ---EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
....+|+|+-.-. -.... ...++|+|||+++++-
T Consensus 239 t~~~~~g~Dvvid~~G------~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 239 IKQSGGEAKLALNCVG------GKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHTCCEEEEEESSC------HHHHH-HHHHTSCTTCEEEECC
T ss_pred hhccCCCceEEEECCC------chhHH-HHHHHhccCCEEEEec
Confidence 1246899876432 12233 6789999999998753
No 398
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.70 E-value=0.075 Score=48.29 Aligned_cols=96 Identities=21% Similarity=0.172 Sum_probs=58.2
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC--C----------------
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNF--L---------------- 182 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~--~---------------- 182 (359)
++.+|+=+|+|. |..+..++...|++|+++|.++..++.+++. | .++...+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l----G----a~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV----G----AQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT----T----CEECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----C----CeEEeccccccccccchhhhhHHHHhh
Confidence 568999999984 5555666666789999999999887776542 2 22322110 0
Q ss_pred ---CCCCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 183 ---KMPFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 183 ---~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
.+.-.-...|+|+..-.+..-+.+.-+-+++.+.+|||+.++=
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEE
Confidence 0000014679998753222111122233688889999987764
No 399
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.55 E-value=0.1 Score=47.77 Aligned_cols=96 Identities=21% Similarity=0.193 Sum_probs=58.6
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC-------------CCC--
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFL-------------KMP-- 185 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~-------------~~~-- 185 (359)
++.+|+=+|+|. |..+..++...|++|+++|.++..++.+++. | .++...+.. .++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~----G----~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASL----G----AKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT----T----CEECCCCC-----------------CH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----C----Cceeecccccccccccccchhhhcchh
Confidence 568999999984 5566666666789999999999887776652 2 122221110 000
Q ss_pred --------CC--CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 186 --------FE--DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 186 --------~~--~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
+. -...|+|+..-.+.--+.+.-+-+++.+.+|||..++=
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVD 310 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVD 310 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEE
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEE
Confidence 00 03569998653222111222233688899999988874
No 400
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.33 E-value=0.45 Score=44.83 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=56.3
Q ss_pred CCCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 120 VKAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 120 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
..+|++|+=+|+|. |......++..|++|+++|.++..++.+++. | +++ .+..+. -...|+|+..-
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~----G----a~~--~~l~e~---l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMME----G----FDV--VTVEEA---IGDADIVVTAT 337 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----T----CEE--CCHHHH---GGGCSEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----C----CEE--ecHHHH---HhCCCEEEECC
Confidence 55789999999864 4444444555688999999999877665432 3 222 122221 13579988754
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
...++-+ .+..+.+||||+++.+
T Consensus 338 gt~~~i~-----~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 338 GNKDIIM-----LEHIKAMKDHAILGNI 360 (494)
T ss_dssp SSSCSBC-----HHHHHHSCTTCEEEEC
T ss_pred CCHHHHH-----HHHHHhcCCCcEEEEe
Confidence 3222211 3566779999999863
No 401
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.19 E-value=1.9 Score=32.66 Aligned_cols=66 Identities=5% Similarity=0.014 Sum_probs=44.9
Q ss_pred CCEEEEECCCCChHHHHHHh---hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 018194 123 GDRILDVGCGVGGPMRAIAA---HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGAY 195 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~ 195 (359)
.++|+=+||| .++..+++ ..|.+|+++|.+++.++.+++. .+.++.+|..+.. .....+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4579999985 45555554 2478999999999887766542 2578889987632 1234678887
Q ss_pred ecc
Q 018194 196 SIE 198 (359)
Q Consensus 196 ~~~ 198 (359)
...
T Consensus 76 ~~~ 78 (141)
T 3llv_A 76 ITG 78 (141)
T ss_dssp ECC
T ss_pred Eec
Confidence 643
No 402
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.16 E-value=4.2 Score=34.79 Aligned_cols=79 Identities=18% Similarity=0.117 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.+++||=.|++ |.++..+++. .|.+|++++.++..++...+.....+.+.++.++.+|+.+.. +. .
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 35678877755 5555555542 478999999998877766666655554456888999997742 00 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+.+|+|+.+....
T Consensus 110 g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 110 SGVDICINNAGLA 122 (279)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988776543
No 403
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=89.96 E-value=0.34 Score=43.47 Aligned_cols=93 Identities=9% Similarity=0.104 Sum_probs=57.2
Q ss_pred CCC-CEEEEE-CCC-CChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--C----CCCcc
Q 018194 121 KAG-DRILDV-GCG-VGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--F----EDNHF 191 (359)
Q Consensus 121 ~~~-~~vLDi-GcG-~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~----~~~~f 191 (359)
.++ .+||=. |+| .|..+..+++..|++|+++|.+++.++.+++. |.. ..+..+-.++. . ....+
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI----GAA---HVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH----TCS---EEEETTSTTHHHHHHHHHHHHCC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEECCcHHHHHHHHHHhcCCCC
Confidence 345 566644 333 35566777777789999999999988887653 321 22222211110 0 01368
Q ss_pred ceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 192 DGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 192 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
|+|+-.-.- ..+..+.++|+|||+++++.
T Consensus 235 D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 235 RIFLDAVTG-------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CEEEESSCH-------HHHHHHHHHSCTTCEEEECC
T ss_pred cEEEECCCC-------hhHHHHHhhhcCCCEEEEEe
Confidence 988865431 23477889999999999753
No 404
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.87 E-value=2.5 Score=35.84 Aligned_cols=104 Identities=12% Similarity=0.044 Sum_probs=66.6
Q ss_pred CCCEEEEECCC--CCh---HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC----
Q 018194 122 AGDRILDVGCG--VGG---PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE---- 187 (359)
Q Consensus 122 ~~~~vLDiGcG--~G~---~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 187 (359)
.++++|=.|++ .|. ++..|++ .|++|+.++.++...+...+.....+ ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-AGARLIFTYAGERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-TTCEEEEEESSGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-CCCEEEEecCchHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 36788988876 332 3444444 37899999988766666655554433 226899999998753 00
Q ss_pred -CCccceEEecccccc-------cC--C---HH-----------HHHHHHHhccCCCCEEEEEE
Q 018194 188 -DNHFDGAYSIEATCH-------AP--K---LE-----------DVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 -~~~fD~v~~~~~l~~-------~~--~---~~-----------~~l~~~~~~LkpgG~l~~~~ 227 (359)
.+..|+++.+..+.. +. + +. .+++.+...++++|.++.+.
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 136898887765432 10 1 11 25567777888889888754
No 405
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.53 E-value=0.16 Score=46.47 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=32.3
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHH
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARL 163 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~ 163 (359)
++.+|+=+|+|. |..+..+++..|++|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999984 555556666678899999999877666543
No 406
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.48 E-value=1.4 Score=37.42 Aligned_cols=99 Identities=13% Similarity=0.042 Sum_probs=63.9
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----------CC
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF----------ED 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~~ 188 (359)
.++++|=.|++.| ++..+++. .|++|+.+|.++..++...+.. ..++.++.+|+.+..- .-
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 4678888887654 44444431 4789999999988777665543 2368899999987420 01
Q ss_pred CccceEEecccccccC--------CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 189 NHFDGAYSIEATCHAP--------KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
+..|+++.+....... ++ ..+.+.+...++++|.++.+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4689888776544321 11 12455666777778888765
No 407
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.19 E-value=3.5 Score=35.39 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=65.7
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITIN------------EYQVNRARLHNKKAGLDSLCEVVCGNFLKMP- 185 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 185 (359)
.++++|=.|++.| ++..+++. .|++|+.+|.+ ...++.+.......+ .++.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 4678888887654 44444431 47899999987 666666655555543 46899999998742
Q ss_pred ----CC-----CCccceEEecccccccC------CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 186 ----FE-----DNHFDGAYSIEATCHAP------KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 186 ----~~-----~~~fD~v~~~~~l~~~~------~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
+. -+..|+++.+....... ++ ..+++.+...++.+|.++.+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 00 13689988876553321 12 23556677778888988764
No 408
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.11 E-value=4.6 Score=34.53 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=63.8
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITIN-EYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s-~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|++.| ++..+++. .|++|+.++.+ ....+...+.....+ .++.++.+|+.+.. +.
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678888887654 44444431 47899998654 455555555554443 46889999998742 00
Q ss_pred CCccceEEecccccccC--------CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATCHAP--------KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
-+..|+++.+....... ++ ..+++.+.+.++++|.++.+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 13689988876543321 11 23566777788889988875
No 409
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.93 E-value=1 Score=41.50 Aligned_cols=91 Identities=15% Similarity=0.160 Sum_probs=60.3
Q ss_pred CCEEEEECCCCChHHHHHHh---hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 018194 123 GDRILDVGCGVGGPMRAIAA---HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGAY 195 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~ 195 (359)
.++|+=+|+| .++..+++ ..+..|+++|.+++.++.+++. + +.++.+|+.+.. ..-...|+|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~----g----~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF----G----MKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT----T----CCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC----C----CeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 4578888885 44444443 3478999999999999887642 2 568899998742 2235678887
Q ss_pred ecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 196 SIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 196 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+... -+.....+....+.+.|...++..
T Consensus 74 v~~~---~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 74 NAID---DPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp ECCS---SHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ECCC---ChHHHHHHHHHHHHhCCCCeEEEE
Confidence 6432 012334455666778888877763
No 410
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=88.74 E-value=2.2 Score=36.29 Aligned_cols=85 Identities=15% Similarity=0.037 Sum_probs=51.6
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.++++|=.|++ |.++..+++. .|.+|++++.++...+...+.........++.++.+|+.+.. +. -
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 35678888865 4455554432 478999999998766554443322111235788999998732 00 1
Q ss_pred CccceEEecccccccCCHH
Q 018194 189 NHFDGAYSIEATCHAPKLE 207 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~~~~ 207 (359)
+..|+++.+.......++.
T Consensus 85 g~id~lv~~Ag~~~~~~~~ 103 (267)
T 2gdz_A 85 GRLDILVNNAGVNNEKNWE 103 (267)
T ss_dssp SCCCEEEECCCCCCSSSHH
T ss_pred CCCCEEEECCCCCChhhHH
Confidence 3579998877654433443
No 411
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.68 E-value=4.3 Score=35.15 Aligned_cols=102 Identities=12% Similarity=0.072 Sum_probs=65.8
Q ss_pred CCCEEEEECCCCC-hH----HHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----
Q 018194 122 AGDRILDVGCGVG-GP----MRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F----- 186 (359)
Q Consensus 122 ~~~~vLDiGcG~G-~~----~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 186 (359)
.++++|=.|++.| .+ +..|++ .|++|+.++.++...+.+++.....+ ++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-AGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-TTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 4678999997743 23 344444 47899999999766655555544433 5789999998742 0
Q ss_pred CCCccceEEecccccc----------cC--CH-----------HHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCH----------AP--KL-----------EDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~----------~~--~~-----------~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.-+..|+++.+..+.. .+ ++ ..+++.+...++.+|.++.+.
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 0146899988766542 10 11 235566777788889888754
No 412
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.55 E-value=0.15 Score=47.00 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=32.0
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHH
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRAR 162 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~ 162 (359)
++.+|+=+|+|. |..+..+++..|++|+++|.++..++.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 578999999974 55556666667889999999998777654
No 413
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.26 E-value=2.7 Score=36.47 Aligned_cols=78 Identities=10% Similarity=-0.084 Sum_probs=52.8
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C----C------C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-P----F------E 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~----~------~ 187 (359)
.+.+||=.|++ |.++..+++. .|++|++++.++...+.+.+.....+ ..++.++.+|+.+. . + .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 35678877765 4455555442 47899999999988777666655443 34789999999875 2 0 0
Q ss_pred CCccceEEeccccc
Q 018194 188 DNHFDGAYSIEATC 201 (359)
Q Consensus 188 ~~~fD~v~~~~~l~ 201 (359)
.+..|+++.+..+.
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 14689998877654
No 414
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.14 E-value=2.2 Score=36.31 Aligned_cols=78 Identities=18% Similarity=0.017 Sum_probs=54.3
Q ss_pred CCCEEEEECCCCChHHHHHHh---hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCC
Q 018194 122 AGDRILDVGCGVGGPMRAIAA---HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----------FED 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 188 (359)
.|+.+|--|++.| +.+.+++ .-|++|+.+|.+++.++...+.....+ .++.++.+|+.+.. -.-
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 4667777776655 4444443 147999999999999888777776665 46888899987732 112
Q ss_pred CccceEEecccccc
Q 018194 189 NHFDGAYSIEATCH 202 (359)
Q Consensus 189 ~~fD~v~~~~~l~~ 202 (359)
+..|+++.+..+.+
T Consensus 85 G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 85 IHVDILINNAGIQY 98 (255)
T ss_dssp CCCCEEEECCCCCC
T ss_pred CCCcEEEECCCCCC
Confidence 57899988776544
No 415
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.82 E-value=4.2 Score=35.14 Aligned_cols=102 Identities=20% Similarity=0.228 Sum_probs=63.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHH-HHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEY-QVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|++.| ++..+++. .|++|+.++.++. ..+...+.....+ .++.++.+|+.+.. +.
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678888887654 44444431 4789999998765 3444444444333 46899999998742 10
Q ss_pred CCccceEEeccccccc-------C--CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATCHA-------P--KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~-------~--~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
-+..|+++.+...... + ++ ..+++.+.+.++.+|.++.+
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 1368998877543321 1 11 23566777788889988764
No 416
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=87.72 E-value=4.5 Score=34.44 Aligned_cols=103 Identities=25% Similarity=0.220 Sum_probs=64.3
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITI-NEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|++. .++..+++. .|++|+.++. ++...+...+.....+ .++.++.+|+.+.. +.
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356788777664 444444431 4789998775 4555555555555443 46899999998742 00
Q ss_pred CCccceEEecccccccC--------CH-----------HHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHAP--------KL-----------EDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~~ 227 (359)
-+..|+++.+....... ++ ..+.+.+.+.++++|.++.+.
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 13679988776554321 11 235567778888899888753
No 417
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=87.51 E-value=4.7 Score=34.10 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=67.1
Q ss_pred CCCEEEEECCCC--C--h-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----
Q 018194 122 AGDRILDVGCGV--G--G-PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F----- 186 (359)
Q Consensus 122 ~~~~vLDiGcG~--G--~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 186 (359)
.|+++|=-|++. | . .+..|++ -|++|+.+|.++..++.+.+..++.+- .++.+++.|+.+.. +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~-~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ-LGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH-TTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 477889888643 3 2 3444555 479999999999888887777766542 36889999997732 0
Q ss_pred CCCccceEEeccccccc-------C--CHH--------------HHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHA-------P--KLE--------------DVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~-------~--~~~--------------~~l~~~~~~LkpgG~l~~~~ 227 (359)
.-+..|+++.+..+... . +.+ ...+.....++.||.++.+.
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 11578988876543221 1 111 12244556778899988654
No 418
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.48 E-value=0.24 Score=44.03 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=39.9
Q ss_pred CeEEEEcCCCC-CC-CCCCccceEEeccccccc--------------CCHHHHHHHHHhccCCCCEEEEE
Q 018194 173 LCEVVCGNFLK-MP-FEDNHFDGAYSIEATCHA--------------PKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 173 ~i~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~--------------~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
+..++++|..+ +. +++++||+|++.--.... ......+.++.++|||||.+++.
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 56788888765 33 567889999987443221 13568899999999999999884
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.10 E-value=1.9 Score=36.63 Aligned_cols=102 Identities=17% Similarity=0.069 Sum_probs=64.1
Q ss_pred CCCEEEEECCCCChHHHHHHh---h-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGGPMRAIAA---H-SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~---~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 187 (359)
.+++||=.| |+|.++..+++ . .+.+|++++.++...+...+.....+ .++.++.+|+.+.. +.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 356777666 55666666654 2 47899999999887766655555443 46889999998742 00
Q ss_pred CCccceEEecccccccC--------CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATCHAP--------KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
.+.+|+|+.+....... ++ ..+++.+.+.++++|+++.+
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 13689888765443211 11 13555666677777887764
No 420
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=86.89 E-value=4.3 Score=35.13 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=63.7
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCC--HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC----
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITIN--EYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE---- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s--~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 187 (359)
.++++|=.|++. .++..+++. .|++|+.++.+ ....+...+.....+ .++.++.+|+.+.. +.
T Consensus 48 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDS-GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 367888888664 444444431 47899999986 334444544444443 46888999987742 00
Q ss_pred -CCccceEEeccccccc-C-----C---H-----------HHHHHHHHhccCCCCEEEEE
Q 018194 188 -DNHFDGAYSIEATCHA-P-----K---L-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 -~~~fD~v~~~~~l~~~-~-----~---~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
-+..|+++.+...... . + + ..+++.+...++++|.++.+
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 1468998877665321 1 1 1 23556677788889988875
No 421
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.87 E-value=9.2 Score=32.49 Aligned_cols=91 Identities=12% Similarity=-0.022 Sum_probs=58.1
Q ss_pred CEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 124 DRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
++||=.|+ |.++..+++. .+.+|++++-++........ .+++++.+|+.++. -..+|+|+.....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCCc
Confidence 68999994 8888777653 36799999998865543322 35899999998866 4578998876655
Q ss_pred cccCCH--HHHHHHHHhccCCCCEEEEE
Q 018194 201 CHAPKL--EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 201 ~~~~~~--~~~l~~~~~~LkpgG~l~~~ 226 (359)
....+. ..+++.+.+.-..-.++++.
T Consensus 74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp BTTBCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred cccccHHHHHHHHHHHhhcCCceEEEEe
Confidence 433322 23344333321222456553
No 422
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.56 E-value=2.8 Score=35.94 Aligned_cols=77 Identities=16% Similarity=0.080 Sum_probs=51.9
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC---------CCC
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF---------EDN 189 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------~~~ 189 (359)
.++++|=.|++ |.++..+++. .|++|+.+|.++..++...+.....+ .++.++.+|+.+..- ..+
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 35678877765 4455554442 47899999999887776666655543 468999999987530 014
Q ss_pred ccceEEeccccc
Q 018194 190 HFDGAYSIEATC 201 (359)
Q Consensus 190 ~fD~v~~~~~l~ 201 (359)
..|+++.+....
T Consensus 109 ~iD~lvnnAg~~ 120 (275)
T 4imr_A 109 PVDILVINASAQ 120 (275)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988876643
No 423
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=85.51 E-value=0.73 Score=34.98 Aligned_cols=41 Identities=10% Similarity=0.199 Sum_probs=30.9
Q ss_pred CCCCCccceEEeccccc-c-cCCHHHHHHHHHhccCCCCEEEE
Q 018194 185 PFEDNHFDGAYSIEATC-H-APKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 185 ~~~~~~fD~v~~~~~l~-~-~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
.+++++||.|+...--. . ..-+..++..+.+.|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 36789999998754332 2 22248999999999999999973
No 424
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.41 E-value=1.2 Score=34.50 Aligned_cols=93 Identities=18% Similarity=0.146 Sum_probs=52.2
Q ss_pred CCCCEEEEECCCCChHHHHHHh---hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccce
Q 018194 121 KAGDRILDVGCGVGGPMRAIAA---HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDG 193 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~ 193 (359)
.++++|+=+||| .++..+++ ..+.+|+++|.++..++.+++ . ..+.++.+|..+.. ..-..+|+
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHcCcccCCE
Confidence 357899999985 44444433 346799999999876544321 1 12456667764421 11245788
Q ss_pred EEecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 194 AYSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 194 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
|+..-.- +.....+..+.+.+.|...++.
T Consensus 88 Vi~~~~~---~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 88 VFAFTND---DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp EEECSSC---HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEEeCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 8775321 1223344445555556555554
No 425
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.19 E-value=9.5 Score=28.19 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=52.7
Q ss_pred CCEEEEECCCCChHHHHHHh---hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 018194 123 GDRILDVGCGVGGPMRAIAA---HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGAY 195 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~ 195 (359)
+++|+=+|+ |..+..+++ ..+.+|+++|.++..++..++. . .+.++.+|..+.. .....+|+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 468998987 455555443 2467999999998876655432 1 2456777765421 1124689887
Q ss_pred ecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 196 SIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 196 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
..-.- +.....+..+.+.+.++ .+++
T Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 75 AVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp ECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred EeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 76321 12233455566667775 4443
No 426
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.13 E-value=0.92 Score=40.60 Aligned_cols=97 Identities=14% Similarity=0.257 Sum_probs=57.8
Q ss_pred HHHhcCCCCCCEEEEECCC--CChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----
Q 018194 114 AVDLIDVKAGDRILDVGCG--VGGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----- 185 (359)
Q Consensus 114 ~~~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 185 (359)
+.+...+++|.+||=.|++ .|..+..+++.. +.+|++++ ++...+.++ .|.. .++. +-.++.
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~---~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT---HLFD-RNADYVQEVKR 203 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS---EEEE-TTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc---EEEc-CCccHHHHHHH
Confidence 3355678899999999983 466777888754 57999998 555444443 2321 2222 211110
Q ss_pred CCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEEE
Q 018194 186 FEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 186 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 227 (359)
...+.+|+|+-.-.- ..+....++|+|||+++++.
T Consensus 204 ~~~~g~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 204 ISAEGVDIVLDCLCG-------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp HCTTCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred hcCCCceEEEECCCc-------hhHHHHHHHhhcCCEEEEEC
Confidence 123579998864321 12367889999999999864
No 427
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.05 E-value=3.3 Score=38.26 Aligned_cols=87 Identities=17% Similarity=0.094 Sum_probs=52.6
Q ss_pred CCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccc
Q 018194 121 KAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 199 (359)
-.|++|+=+|+|. |......++..|++|+++|+++.....+. ..| +.+ .++.+. + ...|+|+..-.
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~----~~G----~~v--v~LeEl-L--~~ADIVv~atg 311 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA----MDG----FEV--VTLDDA-A--STADIVVTTTG 311 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH----HTT----CEE--CCHHHH-G--GGCSEEEECCS
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH----hcC----cee--ccHHHH-H--hhCCEEEECCC
Confidence 4688999999885 54444445557899999999986543332 122 222 222221 1 35688876432
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 200 TCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
-.|+ +-.+....+|||++++-
T Consensus 312 t~~l-----I~~e~l~~MK~GAILIN 332 (464)
T 3n58_A 312 NKDV-----ITIDHMRKMKDMCIVGN 332 (464)
T ss_dssp SSSS-----BCHHHHHHSCTTEEEEE
T ss_pred Cccc-----cCHHHHhcCCCCeEEEE
Confidence 2222 11566788999998874
No 428
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.99 E-value=3.7 Score=35.35 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=64.9
Q ss_pred CCCEEEEECCCCCh---HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 018194 122 AGDRILDVGCGVGG---PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-----ED 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 188 (359)
.|+.+|--|++.|. .+..|++ -|++|+.+|.+++.++.+.+.. ..++.++.+|+.+.. + .-
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~-~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVA-EGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47788888877663 3334444 4799999999998877654433 245788899998742 0 11
Q ss_pred CccceEEecccccccC--------CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 189 NHFDGAYSIEATCHAP--------KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
+..|+++.+....... ++ -.+.+.+...|+.+|.++.+
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 5689888776544321 12 13556667788888887764
No 429
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=84.93 E-value=4.8 Score=34.89 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=65.0
Q ss_pred CCCEEEEECCCC-ChHHH----HHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC----
Q 018194 122 AGDRILDVGCGV-GGPMR----AIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE---- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~----~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 187 (359)
.++++|=.|++. ..++. .|++ .|++|+.+|.++...+...+.....+ .+.++.+|+.+.. +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA-QGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-TTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 367899888764 23444 4444 47899999999766655555544443 3688999998742 10
Q ss_pred -CCccceEEeccccccc----------C--CH-----------HHHHHHHHhccCCCCEEEEEE
Q 018194 188 -DNHFDGAYSIEATCHA----------P--KL-----------EDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 -~~~fD~v~~~~~l~~~----------~--~~-----------~~~l~~~~~~LkpgG~l~~~~ 227 (359)
-+..|+++.+..+... + ++ ..+++.+...++.+|.++.+.
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 1468999887755421 1 11 235566677778889888753
No 430
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=84.67 E-value=1.8 Score=38.78 Aligned_cols=96 Identities=17% Similarity=0.112 Sum_probs=61.5
Q ss_pred cCCCCCCEEEEECCCC-ChHHHHHHhhc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC--C-C-CCC-CCc
Q 018194 118 IDVKAGDRILDVGCGV-GGPMRAIAAHS-RANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFL--K-M-PFE-DNH 190 (359)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~--~-~-~~~-~~~ 190 (359)
..+.+|.+||-+|+|. |..+..+++.. |++|+++|.+++.++.+++. |.. .++..+-. + . ... ...
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~v~~~~~g~g 254 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL----GAD---HVVDARRDPVKQVMELTRGRG 254 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT----TCS---EEEETTSCHHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh----CCC---EEEeccchHHHHHHHHhCCCC
Confidence 6788999999999863 55677777766 89999999999988887642 321 22221111 0 0 011 236
Q ss_pred cceEEecccccccCCHH-HHHHHHHhccCCCCEEEEEE
Q 018194 191 FDGAYSIEATCHAPKLE-DVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~-~~l~~~~~~LkpgG~l~~~~ 227 (359)
+|+|+-.-. ... ..+....+. +||+++++.
T Consensus 255 ~Dvvid~~G-----~~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 255 VNVAMDFVG-----SQATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp EEEEEESSC-----CHHHHHHGGGGEE--EEEEEEECC
T ss_pred CcEEEECCC-----CchHHHHHHHhhc--CCCEEEEEe
Confidence 899876432 211 156666666 999998753
No 431
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=84.23 E-value=2.6 Score=35.74 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=62.5
Q ss_pred CCCEEEEECCCCCh---HHHHHHhhcCCEEEEE-eCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGG---PMRAIAAHSRANVVGI-TINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~g~-D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|++.|. ++..|++ -|++|+.+ +.++...+...+.....+ .++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~-~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQ-EGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876553 3333444 37899988 666666666555554433 46889999998742 00
Q ss_pred CCccceEEeccccc-c---cC--C---H-----------HHHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATC-H---AP--K---L-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~-~---~~--~---~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
-+..|+++.+.... . +. + + ..+.+.+...++++|.++.+
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 14689888766433 1 11 1 1 23455666677778887764
No 432
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.09 E-value=4.8 Score=34.18 Aligned_cols=76 Identities=16% Similarity=0.123 Sum_probs=54.8
Q ss_pred CCCEEEEECCCCCh---HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 018194 122 AGDRILDVGCGVGG---PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-----ED 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 188 (359)
.|+.+|--|++.|. .+..|++ -|++|+.+|.+++.++...+.+...+ .++.++.+|+.+.. + .-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~-~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFAL-NDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788888877664 3344444 47899999999999988887777665 46899999998742 0 01
Q ss_pred CccceEEecccc
Q 018194 189 NHFDGAYSIEAT 200 (359)
Q Consensus 189 ~~fD~v~~~~~l 200 (359)
+..|+++.+..+
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 578998877654
No 433
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.95 E-value=3.4 Score=34.99 Aligned_cols=104 Identities=14% Similarity=0.078 Sum_probs=65.4
Q ss_pred CCCCEEEEECCC-CChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----
Q 018194 121 KAGDRILDVGCG-VGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F----- 186 (359)
Q Consensus 121 ~~~~~vLDiGcG-~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 186 (359)
..+++||=.|++ +|.++..+++. .|++|+.++.+....+..++.....+ ++.++.+|+.+.. +
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 357799988875 34455555442 47899999988665555555544432 4789999998742 0
Q ss_pred CCCccceEEeccccccc-----------C--CH-----------HHHHHHHHhccCCCCEEEEEE
Q 018194 187 EDNHFDGAYSIEATCHA-----------P--KL-----------EDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~-----------~--~~-----------~~~l~~~~~~LkpgG~l~~~~ 227 (359)
.-+..|+++.+..+... + ++ ..+++.+...++++|.++.+.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 01468998877654331 1 11 234556667777788877653
No 434
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=83.93 E-value=8.9 Score=29.29 Aligned_cols=93 Identities=10% Similarity=-0.007 Sum_probs=56.4
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceE
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITIN-EYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGA 194 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s-~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v 194 (359)
..+|+=+|+ |..+..+++. .+.+|+++|.+ ++.++...... +..+.++.+|..+.. ..-...|+|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 346887876 5666666542 46899999997 45444443322 124788999987632 113467888
Q ss_pred EecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 195 YSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 195 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
++...- ......+....+.+.|...++.
T Consensus 76 i~~~~~---d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 76 LALSDN---DADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp EECSSC---HHHHHHHHHHHHHHTSSSCEEE
T ss_pred EEecCC---hHHHHHHHHHHHHHCCCCEEEE
Confidence 775421 1234455566667777777765
No 435
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=83.84 E-value=6 Score=34.75 Aligned_cols=89 Identities=18% Similarity=0.205 Sum_probs=55.2
Q ss_pred CCEEEEECCCC-C-hHHHHHHhhcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 123 GDRILDVGCGV-G-GPMRAIAAHSRA--NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 123 ~~~vLDiGcG~-G-~~~~~l~~~~~~--~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
.++|.=||+|. | .++..+.+ .|. +|+++|.+++.++.+.+ .|. +.-...|..+. .-...|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~-~G~~~~V~~~dr~~~~~~~a~~----~G~---~~~~~~~~~~~--~~~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVD----LGI---IDEGTTSIAKV--EDFSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHH----TTS---CSEEESCTTGG--GGGCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHH----CCC---cchhcCCHHHH--hhccCCEEEEeC
Confidence 36899999874 2 23444444 355 99999999988777653 232 11122333320 123569888754
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYV 224 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~ 224 (359)
... ....+++++...++||..++
T Consensus 103 p~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 PVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred CHH---HHHHHHHHHhhccCCCcEEE
Confidence 322 35678889999999987654
No 436
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.61 E-value=7.4 Score=32.08 Aligned_cols=72 Identities=21% Similarity=0.197 Sum_probs=47.1
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCe-EEEEcCCCC-CCCCCCccceEEe
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLC-EVVCGNFLK-MPFEDNHFDGAYS 196 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i-~~~~~d~~~-~~~~~~~fD~v~~ 196 (359)
.+++||=.|+ +|.++..+++. .|.+|++++-++..++.... .++ +++.+|+.+ +.-.-+..|+|+.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 4789998875 46666665542 47899999999876554322 247 889999862 1111246899988
Q ss_pred cccccc
Q 018194 197 IEATCH 202 (359)
Q Consensus 197 ~~~l~~ 202 (359)
+.....
T Consensus 91 ~ag~~~ 96 (236)
T 3e8x_A 91 AAGSGP 96 (236)
T ss_dssp CCCCCT
T ss_pred CCCCCC
Confidence 776544
No 437
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=83.60 E-value=3.4 Score=32.10 Aligned_cols=109 Identities=13% Similarity=0.096 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChHHHHHHh-hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-
Q 018194 107 TRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAA-HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM- 184 (359)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 184 (359)
++...........-.+| -|||+|-|.|..--.|.+ .++..|+++|---.. .....|+.-.++.+|+.+.
T Consensus 26 QR~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~--------hp~~~P~~e~~ilGdi~~tL 96 (174)
T 3iht_A 26 QRACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS--------HPDSTPPEAQLILGDIRETL 96 (174)
T ss_dssp HHHHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC--------CGGGCCCGGGEEESCHHHHH
T ss_pred HHHHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc--------CCCCCCchHheecccHHHHH
Confidence 44445555555554444 699999999999999988 478899999952110 0001233445667776552
Q ss_pred CCC----CCccceEEecccccccCCHH-----HHHHHHHhccCCCCEEEE
Q 018194 185 PFE----DNHFDGAYSIEATCHAPKLE-----DVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 185 ~~~----~~~fD~v~~~~~l~~~~~~~-----~~l~~~~~~LkpgG~l~~ 225 (359)
+.. ....-++++....++- +.. .+=.-+..+|.|||.++-
T Consensus 97 ~~~~~r~g~~a~LaHaD~G~g~~-~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 97 PATLERFGATASLVHADLGGHNR-EKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHHCSCEEEEEECCCCSCH-HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHhcCCceEEEEeecCCCCc-chhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 110 2233344443333322 211 122335678999999885
No 438
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=83.35 E-value=6 Score=33.73 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=51.2
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITIN------------EYQVNRARLHNKKAGLDSLCEVVCGNFLKMP- 185 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 185 (359)
.++++|=.|++.| ++..+++. .|++|+++|.+ ++.++...+.....+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4678888886644 44444431 47899999987 666666555554443 46899999998742
Q ss_pred ----CC-----CCccceEEecccccc
Q 018194 186 ----FE-----DNHFDGAYSIEATCH 202 (359)
Q Consensus 186 ----~~-----~~~fD~v~~~~~l~~ 202 (359)
+. -+..|+++.+..+..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 10 146899988776543
No 439
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.20 E-value=2.1 Score=37.38 Aligned_cols=87 Identities=16% Similarity=0.130 Sum_probs=51.6
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCCCCCCCccceEEeccc
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVC-GNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~v~~~~~ 199 (359)
.+++|+=||+|. |......+...|.+|+++|.++...+.+.+ .+ +.... .+..+. -...|+|+..-.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g----~~~~~~~~l~~~---l~~aDvVi~~~p 224 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE----MG----LVPFHTDELKEH---VKDIDICINTIP 224 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT----CEEEEGGGHHHH---STTCSEEEECCS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CC----CeEEchhhHHHH---hhCCCEEEECCC
Confidence 578999999863 332223333467899999999875544322 22 23221 122111 246799988766
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 200 TCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
.+.+. ++....+|||+.++-
T Consensus 225 ~~~i~------~~~~~~mk~g~~lin 244 (300)
T 2rir_A 225 SMILN------QTVLSSMTPKTLILD 244 (300)
T ss_dssp SCCBC------HHHHTTSCTTCEEEE
T ss_pred hhhhC------HHHHHhCCCCCEEEE
Confidence 54332 234578999987763
No 440
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.14 E-value=2.2 Score=39.20 Aligned_cols=87 Identities=14% Similarity=0.111 Sum_probs=52.7
Q ss_pred CCCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccc
Q 018194 121 KAGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 199 (359)
-.|.+|+=+|+|. |......++..|++|+++|.++.....+.. .| ..+ .++.+. -...|+|+....
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~----~G----~~v--~~Leea---l~~ADIVi~atg 284 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM----DG----FRL--VKLNEV---IRQVDIVITCTG 284 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHH---TTTCSEEEECSS
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH----cC----CEe--ccHHHH---HhcCCEEEECCC
Confidence 4688999999985 544444555568999999999865443321 22 121 222221 135698888432
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 200 TCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
..++-+ .+..+.+|||++++-
T Consensus 285 t~~lI~-----~e~l~~MK~gailIN 305 (435)
T 3gvp_A 285 NKNVVT-----REHLDRMKNSCIVCN 305 (435)
T ss_dssp CSCSBC-----HHHHHHSCTTEEEEE
T ss_pred CcccCC-----HHHHHhcCCCcEEEE
Confidence 222211 356778999987764
No 441
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.04 E-value=10 Score=31.55 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=49.2
Q ss_pred CCCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-CCCcc
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-EDNHF 191 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~~f 191 (359)
.++.+||=.|++ |.++..+++. .|.+|+.++.++..++...+.. ..++.+..+|+.+.. + ..+..
T Consensus 12 ~~~k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGAS-SGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 356788877765 4455554442 4789999999988777655443 246889999987632 1 12468
Q ss_pred ceEEeccccc
Q 018194 192 DGAYSIEATC 201 (359)
Q Consensus 192 D~v~~~~~l~ 201 (359)
|+++.+....
T Consensus 86 d~li~~Ag~~ 95 (249)
T 3f9i_A 86 DILVCNAGIT 95 (249)
T ss_dssp SEEEECCC--
T ss_pred CEEEECCCCC
Confidence 9988776543
No 442
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.02 E-value=1.7 Score=37.92 Aligned_cols=87 Identities=14% Similarity=0.072 Sum_probs=50.9
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCCCCCCCccceEEeccc
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVC-GNFLKMPFEDNHFDGAYSIEA 199 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~v~~~~~ 199 (359)
.+++|+=+|+|. |......+...|.+|+++|.++...+.+. ..+ +.... .+..+. -...|+|+..-.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~~l~~~---l~~aDvVi~~~p 222 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFHISKAAQE---LRDVDVCINTIP 222 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEEGGGHHHH---TTTCSEEEECCS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecChhhHHHH---hcCCCEEEECCC
Confidence 678999999863 33333333346789999999987654433 222 23322 121111 245799988665
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 200 TCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 200 l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
.+.+. . +....+|||+.++-
T Consensus 223 ~~~i~-~-----~~l~~mk~~~~lin 242 (293)
T 3d4o_A 223 ALVVT-A-----NVLAEMPSHTFVID 242 (293)
T ss_dssp SCCBC-H-----HHHHHSCTTCEEEE
T ss_pred hHHhC-H-----HHHHhcCCCCEEEE
Confidence 43332 2 34557899988763
No 443
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=82.81 E-value=7.5 Score=31.81 Aligned_cols=90 Identities=12% Similarity=0.002 Sum_probs=56.3
Q ss_pred CEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEEe
Q 018194 124 DRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGAYS 196 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~ 196 (359)
++|+=+|+ |.++..+++. .+.+|+++|.+++.++...+. . .+.++.+|..+.. ..-..+|+|++
T Consensus 1 M~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 1 MKVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CCEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 35777776 5566666542 468999999999987764432 1 3578999987632 12346788877
Q ss_pred cccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 197 IEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 197 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
...- +.....+....+.+.|...++.
T Consensus 72 ~~~~---d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 72 LTPR---DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CCSC---HHHHHHHHHHHHHTSCCCEEEE
T ss_pred ecCC---cHHHHHHHHHHHHHcCCCeEEE
Confidence 4321 1233445555666667777665
No 444
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.66 E-value=7.7 Score=33.56 Aligned_cols=78 Identities=18% Similarity=0.174 Sum_probs=50.4
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGL-DSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|+ +|.++..+++. .|++|++++.++..++...+.....+. ..++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3567776665 45555555542 478999999998877766555544331 115889999998742 10
Q ss_pred CCccceEEecccc
Q 018194 188 DNHFDGAYSIEAT 200 (359)
Q Consensus 188 ~~~fD~v~~~~~l 200 (359)
-+..|+++.+...
T Consensus 104 ~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 104 FGKIDILVNNAGA 116 (297)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1368998887654
No 445
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=82.60 E-value=0.72 Score=52.34 Aligned_cols=101 Identities=14% Similarity=0.046 Sum_probs=67.6
Q ss_pred HhcCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CC-C
Q 018194 116 DLIDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKM-----PF-E 187 (359)
Q Consensus 116 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~-~ 187 (359)
....+++|.+||=.|+ |.|..+..+++..|++|++++.+++..+.+++.....+.. .++...-.+. .. .
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~---~v~~~~~~~~~~~i~~~t~ 1737 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDET---CFANSRDTSFEQHVLRHTA 1737 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCST---TEEESSSSHHHHHHHHTTT
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCce---EEecCCCHHHHHHHHHhcC
Confidence 3456789999999874 4577888889888999999999998887776643222211 1222111110 01 1
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
...+|+|+-... ...+....++|+|||+++.+
T Consensus 1738 g~GvDvVld~~g-------~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1738 GKGVDLVLNSLA-------EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp SCCEEEEEECCC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCceEEEECCC-------chHHHHHHHhcCCCcEEEEe
Confidence 245899886331 45688999999999999875
No 446
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.17 E-value=27 Score=32.58 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=51.1
Q ss_pred CCCEEEEECCCCChHHHHHHh---hcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 122 AGDRILDVGCGVGGPMRAIAA---HSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
.|++|+=+|+| ..+..+++ ..|++|+++|+++.....+... + +. ..+..+. ....|+|+...
T Consensus 264 ~GKtVvVtGaG--gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~----g----~d--v~~lee~---~~~aDvVi~at 328 (488)
T 3ond_A 264 AGKVAVVAGYG--DVGKGCAAALKQAGARVIVTEIDPICALQATME----G----LQ--VLTLEDV---VSEADIFVTTT 328 (488)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----T----CE--ECCGGGT---TTTCSEEEECS
T ss_pred cCCEEEEECCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh----C----Cc--cCCHHHH---HHhcCEEEeCC
Confidence 68899999988 44444443 3588999999998766554432 2 12 2233222 24579887644
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
.-.++-+ .+..+.+|+|+.++-
T Consensus 329 G~~~vl~-----~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 329 GNKDIIM-----LDHMKKMKNNAIVCN 350 (488)
T ss_dssp SCSCSBC-----HHHHTTSCTTEEEEE
T ss_pred CChhhhh-----HHHHHhcCCCeEEEE
Confidence 3222211 335778999987764
No 447
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.94 E-value=7.9 Score=33.10 Aligned_cols=101 Identities=23% Similarity=0.179 Sum_probs=60.6
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHH-HHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQ-VNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~-~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
++++|=.|++ |.++..+++. .|++|++++.++.. .+...+.....+ .++.++.+|+.+.. +. -
T Consensus 29 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 29 GKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5677766655 5555555542 47899999987543 343333333333 46888999987632 00 1
Q ss_pred CccceEEecccccccC--------CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 189 NHFDGAYSIEATCHAP--------KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 189 ~~fD~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
+..|+++.+....... ++ ..+++.+.+.|+.+|.++.+
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 3679988776544321 11 12446666777778888875
No 448
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=80.23 E-value=7.5 Score=33.05 Aligned_cols=102 Identities=12% Similarity=0.028 Sum_probs=62.3
Q ss_pred CCCEEEEECCCCCh---HHHHHHhhcCCEEEEEe-CCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGG---PMRAIAAHSRANVVGIT-INEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~g~D-~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|++.|. ++..|++. |++|+.++ .++...+...+.....+ .++.++.+|+.+.. +.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876553 33344443 78888874 45555555555555443 46889999998742 00
Q ss_pred CCccceEEecccccccC--------CHH-----------HHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATCHAP--------KLE-----------DVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~--------~~~-----------~~l~~~~~~LkpgG~l~~~ 226 (359)
-+..|+++.+..+.... ++. .+++.+...++++|.++.+
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 14689988876554321 111 3456667777888888765
No 449
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.01 E-value=8.6 Score=32.54 Aligned_cols=98 Identities=21% Similarity=0.199 Sum_probs=59.5
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----DN 189 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 189 (359)
++++|=.|++ |.++..+++. .|.+|+.++.++..++...+. +..++.++.+|+.+.. +. -+
T Consensus 6 ~k~vlITGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAA-SGIGRAALDLFAREGASLVAVDREERLLAEAVAA-----LEAEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-----CCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hcCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5678877765 4455444431 478999999998766554332 2246888999998742 10 13
Q ss_pred ccceEEecccccccC-----C---H-----------HHHHHHHHhccCCCCEEEEE
Q 018194 190 HFDGAYSIEATCHAP-----K---L-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 190 ~fD~v~~~~~l~~~~-----~---~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
..|+++.+....... + + ..+.+.+...++.+|.++.+
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 135 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 135 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 579998876554321 1 1 12344555556557887764
No 450
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.27 E-value=11 Score=31.76 Aligned_cols=76 Identities=12% Similarity=0.021 Sum_probs=53.5
Q ss_pred CCCEEEEECCCCCh---HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 018194 122 AGDRILDVGCGVGG---PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-----ED 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 188 (359)
.++++|=.|++.|. ++..|++ .|++|+.+|.++..++...+.....+ .++.++.+|+.+.. + .-
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAE-QGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHH-CcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788988887653 3344444 47899999999988887776666554 46899999998742 0 01
Q ss_pred CccceEEecccc
Q 018194 189 NHFDGAYSIEAT 200 (359)
Q Consensus 189 ~~fD~v~~~~~l 200 (359)
+..|+++.+...
T Consensus 87 g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 GRVDVVINNAFR 98 (264)
T ss_dssp SCCSEEEECCCS
T ss_pred CCCcEEEECCCC
Confidence 468998877643
No 451
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=79.26 E-value=10 Score=35.25 Aligned_cols=95 Identities=16% Similarity=0.107 Sum_probs=56.7
Q ss_pred CCEEEEECCCC-Ch-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHH-------cC-C------CCCeEEEEcCCCCCCC
Q 018194 123 GDRILDVGCGV-GG-PMRAIAAHSRANVVGITINEYQVNRARLHNKK-------AG-L------DSLCEVVCGNFLKMPF 186 (359)
Q Consensus 123 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~-------~~-~------~~~i~~~~~d~~~~~~ 186 (359)
-++|.-||+|. |. ++..++. .|.+|+++|.+++.++.+++.... .+ + .....+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~--- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR-VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE--- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG---
T ss_pred CCEEEEECcCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH---
Confidence 35799999986 33 4444444 467999999999988887664321 01 0 011222 334321
Q ss_pred CCCccceEEecccccccCCHHHHHHHHHhccCCCCEEE
Q 018194 187 EDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYV 224 (359)
Q Consensus 187 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 224 (359)
-...|+|+..-. ....-...+++++...++|+..++
T Consensus 112 -~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 112 -LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp -GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 135688877542 111113678888889999887665
No 452
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=79.15 E-value=27 Score=29.84 Aligned_cols=60 Identities=13% Similarity=-0.020 Sum_probs=40.7
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEe-CCHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCCC
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGIT-INEYQVNRARLHNK-KAGLDSLCEVVCGNFLKMP 185 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D-~s~~~~~~a~~~~~-~~~~~~~i~~~~~d~~~~~ 185 (359)
++++|=.|++ |.++..+++. .|++|+.++ .++..++...+... ..+ .++.++.+|+.+..
T Consensus 9 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTGAA-KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcc
Confidence 5677766655 5555555542 478999999 99887776655544 322 46889999998743
No 453
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=79.15 E-value=4.9 Score=34.55 Aligned_cols=95 Identities=9% Similarity=-0.101 Sum_probs=52.7
Q ss_pred CCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHH-cCCCCCeEEE-EcCCCCCCCCCCccceEEecccccccC---
Q 018194 130 GCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKK-AGLDSLCEVV-CGNFLKMPFEDNHFDGAYSIEATCHAP--- 204 (359)
Q Consensus 130 GcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~~~~~i~~~-~~d~~~~~~~~~~fD~v~~~~~l~~~~--- 204 (359)
.++.|.....+.+..|.+|..+|..-... .++..- ..++ -.++. .+|+...+ ..+.+|+|++......-.
T Consensus 149 ~~~~~~~~~~~~k~~g~~vl~v~~~~~~p---~k~v~wi~Pi~-GAt~~~~lDfg~p~-~~~k~DvV~SDMApn~sGh~y 223 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLKGRTVLVVGEKLSVP---GKMVDWLSDRP-EATFRARLDLGIPG-DVPKYDIIFVNVRTPYKYHHY 223 (320)
T ss_dssp CCCCCCCHHHHHTSSCSEEEEEESCCCCT---TSEEEEEESST-TCSEECCGGGCSCT-TSCCEEEEEEECCCCCCSCHH
T ss_pred ccCCCCHHHHHhhCCCcEEEEEecccccC---CceeEeeccCC-CceeecccccCCcc-ccCcCCEEEEcCCCCCCCccc
Confidence 45667777777776677777775221100 000000 0011 12344 66665532 236799999977543221
Q ss_pred ----C----HHHHHHHHHhccCCCCEEEEEEee
Q 018194 205 ----K----LEDVYAEVFRVLKPGSLYVSYEWV 229 (359)
Q Consensus 205 ----~----~~~~l~~~~~~LkpgG~l~~~~~~ 229 (359)
| ..-+++...++|+|||.+++-.|.
T Consensus 224 qQC~DHarii~Lal~fA~~vLkPGGtfV~Kvyg 256 (320)
T 2hwk_A 224 QQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYG 256 (320)
T ss_dssp HHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECC
T ss_pred cccchHHHHHHHHHHHHHHhcCCCceEEEEEec
Confidence 2 223667778999999999985443
No 454
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=78.40 E-value=0.81 Score=46.04 Aligned_cols=91 Identities=15% Similarity=0.176 Sum_probs=58.8
Q ss_pred cCCCCCCEEEEECC--CCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CC
Q 018194 118 IDVKAGDRILDVGC--GVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--------FE 187 (359)
Q Consensus 118 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~ 187 (359)
..+++|.+||=.|+ |.|..+..+++..|++|++++.+++ .+..+ .+ .. .++ |..+.. ..
T Consensus 341 a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l~-----lg--a~-~v~--~~~~~~~~~~i~~~t~ 409 (795)
T 3slk_A 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVE-----LS--RE-HLA--SSRTCDFEQQFLGATG 409 (795)
T ss_dssp TCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGSC-----SC--GG-GEE--CSSSSTHHHHHHHHSC
T ss_pred hCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhhh-----cC--hh-hee--ecCChhHHHHHHHHcC
Confidence 46788999999995 4678889999988999999986542 11111 11 11 111 111111 12
Q ss_pred CCccceEEecccccccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 188 DNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
...+|+|+-...- ..+....++|+|||+++.+
T Consensus 410 g~GvDvVld~~gg-------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 410 GRGVDVVLNSLAG-------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SSCCSEEEECCCT-------TTTHHHHTSCTTCEEEEEC
T ss_pred CCCeEEEEECCCc-------HHHHHHHHHhcCCCEEEEe
Confidence 2468999874321 2457888999999999875
No 455
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=78.26 E-value=9.8 Score=32.61 Aligned_cols=76 Identities=13% Similarity=-0.017 Sum_probs=48.1
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCH-HHHHHHHHHHH-HcCCCCCeEEEEcCCCC----CC-----CC
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINE-YQVNRARLHNK-KAGLDSLCEVVCGNFLK----MP-----FE 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~-~~~~~a~~~~~-~~~~~~~i~~~~~d~~~----~~-----~~ 187 (359)
.++++|=.|++ |.++..+++. .|++|+.++.++ ..++...+... ..+ .++.++.+|+.+ .. +.
T Consensus 22 ~~k~~lVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 22 EAPAAVVTGAA-KRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHHHHH
Confidence 35677777765 5555555442 378999999987 66655544443 222 468899999987 21 00
Q ss_pred -----CCccceEEecccc
Q 018194 188 -----DNHFDGAYSIEAT 200 (359)
Q Consensus 188 -----~~~fD~v~~~~~l 200 (359)
-+..|+++.+..+
T Consensus 99 ~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 1368998887654
No 456
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.91 E-value=9.8 Score=32.07 Aligned_cols=78 Identities=18% Similarity=0.139 Sum_probs=53.8
Q ss_pred CCCEEEEECC-CCCh---HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGC-GVGG---PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGc-G~G~---~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|+ |.|. ++..|++. |.+|+.+|.++..++...+.....+ ..++.++.+|+.+.. +.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678888887 5553 44445554 7899999999988877766664433 347899999998742 00
Q ss_pred CCccceEEeccccc
Q 018194 188 DNHFDGAYSIEATC 201 (359)
Q Consensus 188 ~~~fD~v~~~~~l~ 201 (359)
.+..|+++.+..+.
T Consensus 99 ~g~id~li~~Ag~~ 112 (266)
T 3o38_A 99 AGRLDVLVNNAGLG 112 (266)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCCcEEEECCCcC
Confidence 13689998876653
No 457
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.79 E-value=10 Score=32.35 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=51.3
Q ss_pred CEEEEECCCC-Ch-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEeccccc
Q 018194 124 DRILDVGCGV-GG-PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATC 201 (359)
Q Consensus 124 ~~vLDiGcG~-G~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 201 (359)
++|.=||||. |. ++..+.+ .+.+|+++|.+++.++.+.+ .+... . ...|..+. ...|+|+..-...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~~~~~~~~~----~g~~~--~-~~~~~~~~----~~~D~vi~av~~~ 68 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRR-RGHYLIGVSRQQSTCEKAVE----RQLVD--E-AGQDLSLL----QTAKIIFLCTPIQ 68 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHH----TTSCS--E-EESCGGGG----TTCSEEEECSCHH
T ss_pred CEEEEEcCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHh----CCCCc--c-ccCCHHHh----CCCCEEEEECCHH
Confidence 3677788764 22 3333333 35699999999988766542 23321 1 12233221 4579888754321
Q ss_pred ccCCHHHHHHHHHhccCCCCEEE
Q 018194 202 HAPKLEDVYAEVFRVLKPGSLYV 224 (359)
Q Consensus 202 ~~~~~~~~l~~~~~~LkpgG~l~ 224 (359)
....+++++...++||..++
T Consensus 69 ---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 69 ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ---HHHHHHHHHGGGSCTTCEEE
T ss_pred ---HHHHHHHHHHhhCCCCCEEE
Confidence 34677888888888887554
No 458
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=77.28 E-value=11 Score=31.53 Aligned_cols=79 Identities=11% Similarity=-0.005 Sum_probs=52.7
Q ss_pred CCCEEEEECCCCCh---HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGG---PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLD-SLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|++.|. ++..|++. |++|+.++.++..++...+........ .++.++.+|+.+.. +.
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 35678888876543 33344443 789999999998887776666544212 46889999998742 00
Q ss_pred CCccceEEeccccc
Q 018194 188 DNHFDGAYSIEATC 201 (359)
Q Consensus 188 ~~~fD~v~~~~~l~ 201 (359)
-+..|+++.+..+.
T Consensus 85 ~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 85 YGAVDILVNAAAMF 98 (250)
T ss_dssp HCCEEEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 14689988876653
No 459
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=77.28 E-value=9.8 Score=31.74 Aligned_cols=76 Identities=18% Similarity=0.035 Sum_probs=52.5
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.+.++|=.|++. .++..+++. .|.+|+.+|.++..++...+.....+ .++.++.+|+.+.. +. .
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 366888888654 444444432 47899999999988887776665543 46889999998742 00 1
Q ss_pred CccceEEecccc
Q 018194 189 NHFDGAYSIEAT 200 (359)
Q Consensus 189 ~~fD~v~~~~~l 200 (359)
+..|+++.+..+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999887654
No 460
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.17 E-value=9.7 Score=33.35 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=54.6
Q ss_pred CCEEEEECCCC-Ch-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-----EcCCCCCCCCCCccceEE
Q 018194 123 GDRILDVGCGV-GG-PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVV-----CGNFLKMPFEDNHFDGAY 195 (359)
Q Consensus 123 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~-----~~d~~~~~~~~~~fD~v~ 195 (359)
.++|.=||+|. |. ++..|++ .+.+|+.+ .+++.++..++.-.....+ ...+. ..|... ...+|+|+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~-~G~~V~l~-~~~~~~~~i~~~g~~~~~~-~~~~~~~~~~~~~~~~----~~~~D~vi 91 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLAR-AGHEVILI-ARPQHVQAIEATGLRLETQ-SFDEQVKVSASSDPSA----VQGADLVL 91 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHH-TTCEEEEE-CCHHHHHHHHHHCEEEECS-SCEEEECCEEESCGGG----GTTCSEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHH-CCCeEEEE-EcHhHHHHHHhCCeEEEcC-CCcEEEeeeeeCCHHH----cCCCCEEE
Confidence 46899999984 32 4444444 46799999 8888877765531100000 01110 112111 24689887
Q ss_pred ecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 196 SIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 196 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
..---. +...+++.+...++|+..++.
T Consensus 92 lavk~~---~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 92 FCVKST---DTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp ECCCGG---GHHHHHHHHTTTSCTTCEEEE
T ss_pred EEcccc---cHHHHHHHHHHhcCCCCEEEE
Confidence 754222 567888999999999877664
No 461
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=77.12 E-value=12 Score=31.54 Aligned_cols=76 Identities=21% Similarity=0.159 Sum_probs=48.4
Q ss_pred CCCEEEEECCCCCh---HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCccce
Q 018194 122 AGDRILDVGCGVGG---PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FEDNHFDG 193 (359)
Q Consensus 122 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~ 193 (359)
.|+.+|--|++.|. .+..|++ -|++|+..|.+.. +.+.+.....+ .++.++.+|+.+.. +..+..|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~-~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAA-AGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHH-cCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 36677776766653 3344444 4789999998753 22333344444 46889999987743 34567899
Q ss_pred EEecccccc
Q 018194 194 AYSIEATCH 202 (359)
Q Consensus 194 v~~~~~l~~ 202 (359)
++.+..+..
T Consensus 83 LVNNAGi~~ 91 (247)
T 4hp8_A 83 LVNNAGIIR 91 (247)
T ss_dssp EEECCCCCC
T ss_pred EEECCCCCC
Confidence 988765543
No 462
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.95 E-value=12 Score=32.05 Aligned_cols=84 Identities=18% Similarity=0.204 Sum_probs=51.3
Q ss_pred CEEEEECC-CC-Ch-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 124 DRILDVGC-GV-GG-PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 124 ~~vLDiGc-G~-G~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
++|.=||+ |. |. ++..+++ .+.+|+++|.+++.++.+.+ .+. .. .+..+ .-...|+|+..-.-
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~----~g~----~~--~~~~~---~~~~aDvVi~av~~ 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-SAHHLAAIEIAPEGRDRLQG----MGI----PL--TDGDG---WIDEADVVVLALPD 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-SSSEEEEECCSHHHHHHHHH----TTC----CC--CCSSG---GGGTCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHh----cCC----Cc--CCHHH---HhcCCCEEEEcCCc
Confidence 48999998 74 32 3334444 46799999999987766544 232 11 12211 12357988875432
Q ss_pred cccCCHHHHHHHHHhccCCCCEEE
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYV 224 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~ 224 (359)
. ....+++++...++||..++
T Consensus 78 ~---~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 78 N---IIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp H---HHHHHHHHHGGGSCTTCEEE
T ss_pred h---HHHHHHHHHHHhCCCCCEEE
Confidence 2 25677788888888876554
No 463
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=76.84 E-value=8.5 Score=32.53 Aligned_cols=102 Identities=10% Similarity=0.013 Sum_probs=61.2
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCH---HHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC---
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINE---YQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE--- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~--- 187 (359)
.++++|=.|++.| ++..+++. .|++|+.++.+. ..++...+..... ..++.++.+|+.+.. +.
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3668887787654 55555442 478999987643 3444444444333 346889999998742 10
Q ss_pred --CCccceEEecccccccC--------CH-----------HHHHHHHHhccCCCCEEEEE
Q 018194 188 --DNHFDGAYSIEATCHAP--------KL-----------EDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 188 --~~~fD~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~ 226 (359)
-+..|+++.+....... ++ ..+.+.+...++++|.++.+
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 14689988776543221 11 13455566667778888764
No 464
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=76.71 E-value=11 Score=32.37 Aligned_cols=79 Identities=11% Similarity=0.042 Sum_probs=52.7
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------C-
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRA---NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP--------F- 186 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~---~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~- 186 (359)
.++++|=.|++.| ++..+++. .|. .|+.++.+++.++...+.........++.++.+|+.+.. .
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3678888887654 44444432 134 999999999888777666655432346889999998743 0
Q ss_pred -CCCccceEEeccccc
Q 018194 187 -EDNHFDGAYSIEATC 201 (359)
Q Consensus 187 -~~~~fD~v~~~~~l~ 201 (359)
.-+..|+++.+....
T Consensus 111 ~~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 111 QEFKDIDILVNNAGKA 126 (287)
T ss_dssp GGGCSCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 114689998876643
No 465
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=76.70 E-value=6.8 Score=32.94 Aligned_cols=77 Identities=10% Similarity=-0.051 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC----CC
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE----DN 189 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----~~ 189 (359)
.+.++|=.|++.| ++..+++. .|++|+.+|.++..++...+.....+ .++.++.+|+.+.. +. .+
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 3567888887654 44444431 47899999999988877776666553 46899999998742 00 14
Q ss_pred ccceEEeccccc
Q 018194 190 HFDGAYSIEATC 201 (359)
Q Consensus 190 ~fD~v~~~~~l~ 201 (359)
..|+++.+....
T Consensus 83 ~id~lv~nAg~~ 94 (252)
T 3h7a_A 83 PLEVTIFNVGAN 94 (252)
T ss_dssp CEEEEEECCCCC
T ss_pred CceEEEECCCcC
Confidence 789988776653
No 466
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.23 E-value=3.2 Score=38.74 Aligned_cols=66 Identities=12% Similarity=0.092 Sum_probs=46.9
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGAY 195 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~ 195 (359)
.|+|+=+||| ..+..+++. -+..|+.+|.+++.++.+.+.. .+..+++|+.+.. ..-+..|+++
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 5788888886 455566653 3568999999999988776542 3688999998743 1235678877
Q ss_pred ec
Q 018194 196 SI 197 (359)
Q Consensus 196 ~~ 197 (359)
+.
T Consensus 74 a~ 75 (461)
T 4g65_A 74 AV 75 (461)
T ss_dssp EC
T ss_pred EE
Confidence 63
No 467
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.21 E-value=24 Score=28.44 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=57.5
Q ss_pred CEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEeccc
Q 018194 124 DRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF-EDNHFDGAYSIEA 199 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~v~~~~~ 199 (359)
++||=.|+ +|.++..+++. .+.+|++++-++..+... ...+++++.+|+.+... .-..+|+|+....
T Consensus 1 MkilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhhcccCCEEEECCc
Confidence 46777774 56666666542 468999999988765432 12468999999987531 1135799887766
Q ss_pred ccccC----CHHHHHHHHHhccCC-CCEEEEE
Q 018194 200 TCHAP----KLEDVYAEVFRVLKP-GSLYVSY 226 (359)
Q Consensus 200 l~~~~----~~~~~l~~~~~~Lkp-gG~l~~~ 226 (359)
..+-+ .......++.+.++. |+++++.
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 54221 123344555555554 4566654
No 468
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=76.16 E-value=0.74 Score=39.41 Aligned_cols=52 Identities=10% Similarity=-0.026 Sum_probs=31.7
Q ss_pred EEEEcCCCCC--CCCCCccceEEeccccccc--------------CCHHHHHHHHHhccCCCCEEEEE
Q 018194 175 EVVCGNFLKM--PFEDNHFDGAYSIEATCHA--------------PKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 175 ~~~~~d~~~~--~~~~~~fD~v~~~~~l~~~--------------~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
.++++|..+. .+++++||+|++.--...- .-....+.++.++|+|||.+++.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4556665431 1345567777664332111 12456788899999999998874
No 469
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=76.03 E-value=12 Score=31.51 Aligned_cols=79 Identities=10% Similarity=-0.125 Sum_probs=52.2
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.++++|=.|++.| ++..+++. .|++|+.+|.++..++...+......-..++.++.+|+.+.. +. -
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 3568888887654 44444431 478999999999888777666554222235889999998742 00 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+++.+....
T Consensus 86 g~id~lvnnAg~~ 98 (265)
T 3lf2_A 86 GCASILVNNAGQG 98 (265)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689988876654
No 470
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=75.88 E-value=19 Score=30.19 Aligned_cols=77 Identities=21% Similarity=0.118 Sum_probs=45.2
Q ss_pred CCCEEEEECCCC-ChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----C
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-----E 187 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 187 (359)
.++++|=.|++. |.++..+++. .|++|+.++.++...+..++.....+ +..++.+|+.+.. + .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHH
Confidence 356888888752 5555555542 47899999987722222222222222 2478889987632 0 1
Q ss_pred CCccceEEeccccc
Q 018194 188 DNHFDGAYSIEATC 201 (359)
Q Consensus 188 ~~~fD~v~~~~~l~ 201 (359)
-+..|+++.+....
T Consensus 85 ~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 85 WPKFDGFVHSIGFA 98 (265)
T ss_dssp CSSEEEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14689988876543
No 471
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=75.69 E-value=39 Score=29.19 Aligned_cols=80 Identities=14% Similarity=0.127 Sum_probs=50.1
Q ss_pred CCCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCCC-CC--CCccce
Q 018194 121 KAGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVV-CGNFLKMP-FE--DNHFDG 193 (359)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~-~~--~~~fD~ 193 (359)
..+++||=.|+ +|.++..+++. .|.+|++++.++...+...+...... ..+++++ .+|+.+.. +. -..+|+
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCE
Confidence 35678997775 46666666542 46899999998876554443332211 1358888 78987643 11 125799
Q ss_pred EEecccccc
Q 018194 194 AYSIEATCH 202 (359)
Q Consensus 194 v~~~~~l~~ 202 (359)
|+.......
T Consensus 87 vih~A~~~~ 95 (342)
T 1y1p_A 87 VAHIASVVS 95 (342)
T ss_dssp EEECCCCCS
T ss_pred EEEeCCCCC
Confidence 887665443
No 472
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=75.63 E-value=6.4 Score=35.64 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=62.8
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc
Q 018194 112 EMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHF 191 (359)
Q Consensus 112 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 191 (359)
+++++.+... +.+||.++-+.|.++..++. ..+++.+.-|...... ....|+.. .. .+ ....+...|
T Consensus 36 ~~l~~~~~~~-~~~~l~~n~~~g~~~~~~~~--~~~~~~~~~~~~~~~~----l~~~~~~~--~~--~~--~~~~~~~~~ 102 (381)
T 3dmg_A 36 DLLQKTVEPF-GERALDLNPGVGWGSLPLEG--RMAVERLETSRAAFRC----LTASGLQA--RL--AL--PWEAAAGAY 102 (381)
T ss_dssp HHHHTTCCCC-SSEEEESSCTTSTTTGGGBT--TBEEEEEECBHHHHHH----HHHTTCCC--EE--CC--GGGSCTTCE
T ss_pred HHHHHHHHHh-CCcEEEecCCCCccccccCC--CCceEEEeCcHHHHHH----HHHcCCCc--cc--cC--CccCCcCCC
Confidence 4455555443 46999999999987766643 3577777655444333 44456542 22 11 112235679
Q ss_pred ceEEeccccc-ccCCHHHHHHHHHhccCCCCEEEEE
Q 018194 192 DGAYSIEATC-HAPKLEDVYAEVFRVLKPGSLYVSY 226 (359)
Q Consensus 192 D~v~~~~~l~-~~~~~~~~l~~~~~~LkpgG~l~~~ 226 (359)
|+|+....=. ........|.++.+.|+|||.+++.
T Consensus 103 d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~ 138 (381)
T 3dmg_A 103 DLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLA 138 (381)
T ss_dssp EEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 9988754211 0112467888999999999999875
No 473
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=75.53 E-value=11 Score=31.63 Aligned_cols=77 Identities=16% Similarity=0.060 Sum_probs=52.3
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.++++|=.|++.| ++..+++. .|++|+.+|.++..++...+.....+ .++.++.+|+.+.. +. -
T Consensus 11 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3567887776654 44444431 37899999999988877766665544 46899999998742 10 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+++.+....
T Consensus 88 g~id~lv~nAg~~ 100 (256)
T 3gaf_A 88 GKITVLVNNAGGG 100 (256)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988876553
No 474
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=75.40 E-value=21 Score=32.80 Aligned_cols=95 Identities=17% Similarity=0.184 Sum_probs=54.0
Q ss_pred CCCEEEEECCCC-Ch-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHH------------HHcCCCCCeEEEEcCCCCCCCC
Q 018194 122 AGDRILDVGCGV-GG-PMRAIAAHSRANVVGITINEYQVNRARLHN------------KKAGLDSLCEVVCGNFLKMPFE 187 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~------------~~~~~~~~i~~~~~d~~~~~~~ 187 (359)
.|.++--||.|. |. .+..|++ .|.+|+++|++++.++..++.. .+.-...++.+. .|+
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~-~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~------ 81 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAK-HGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP------ 81 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHH-TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC------
T ss_pred cCCccEEEeeCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch------
Confidence 466777788875 33 3344455 4789999999999988765421 000001234432 232
Q ss_pred CCccceEEecccccc------cCC---HHHHHHHHHhccCCCCEEEE
Q 018194 188 DNHFDGAYSIEATCH------APK---LEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~------~~~---~~~~l~~~~~~LkpgG~l~~ 225 (359)
...|+|+..-.... -+| .....+.+.+.|+||..++.
T Consensus 82 -~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~ 127 (431)
T 3ojo_A 82 -EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV 127 (431)
T ss_dssp -CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE
T ss_pred -hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE
Confidence 13588776543322 122 45667888888998865443
No 475
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=75.30 E-value=12 Score=32.26 Aligned_cols=77 Identities=16% Similarity=0.076 Sum_probs=54.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.+.+||=.|++.| ++..+++. .|.+|++++.++..++...+.....+ .++.++.+|+.+.. +. .
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 4678888887754 44444431 47899999999998887777666554 46899999998742 00 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+++.+....
T Consensus 107 g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 GGVDVVFSNAGIV 119 (301)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3689998876654
No 476
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=74.99 E-value=23 Score=28.95 Aligned_cols=77 Identities=10% Similarity=-0.093 Sum_probs=50.8
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCCC-----CCC-----
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNK-KAGLDSLCEVVCGNFLKMP-----FED----- 188 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~-~~~~~~~i~~~~~d~~~~~-----~~~----- 188 (359)
++++|=.|++ |.++..+++. .|.+|+.++.++..++...+... ..+ .++.++.+|+.+.. +..
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4567777765 4455555442 47899999999887776655543 333 46899999998742 111
Q ss_pred CccceEEecccccc
Q 018194 189 NHFDGAYSIEATCH 202 (359)
Q Consensus 189 ~~fD~v~~~~~l~~ 202 (359)
+..|+++.+..+.+
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 36899888776543
No 477
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=74.60 E-value=11 Score=31.84 Aligned_cols=76 Identities=17% Similarity=0.075 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.+.+||=.|++ |.++..+++. .|++|+.++.++..++...+.....+ .++.++.+|+.+.. +. .
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46788877765 5555555442 47899999999988887777666543 46899999998742 10 1
Q ss_pred CccceEEecccc
Q 018194 189 NHFDGAYSIEAT 200 (359)
Q Consensus 189 ~~fD~v~~~~~l 200 (359)
+..|+++.+...
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468998887665
No 478
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=74.55 E-value=15 Score=31.03 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=50.9
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.++++|=.|++ |.++..+++. .|++|+.++.++..++...+.........++.++.+|+.+.. +. -
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35688888865 4455544432 478999999998877665555443311246888999998742 10 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+++.+....
T Consensus 91 g~id~lv~nAg~~ 103 (267)
T 1iy8_A 91 GRIDGFFNNAGIE 103 (267)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3679988876543
No 479
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=74.30 E-value=7.9 Score=33.50 Aligned_cols=90 Identities=12% Similarity=0.164 Sum_probs=52.8
Q ss_pred CEEEEECCCC-Ch-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE------c-----CCCCCCCCCCc
Q 018194 124 DRILDVGCGV-GG-PMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVC------G-----NFLKMPFEDNH 190 (359)
Q Consensus 124 ~~vLDiGcG~-G~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~------~-----d~~~~~~~~~~ 190 (359)
++|.=||+|. |. ++..|++ .+.+|+++|.+++.++..++. ++ .... . +..+..-.-..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~----g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQWPAHIEAIRKN----GL----IADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHH----CE----EEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHh-CCCcEEEEECCHHHHHHHHhC----CE----EEEeCCCeeEecceeecchhhcccCCC
Confidence 5889999874 22 3333444 367999999999887766543 21 1111 0 11111000126
Q ss_pred cceEEecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 191 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 191 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
+|+|+..---. ....+++++...++|+..++.
T Consensus 75 ~d~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 75 VDLIIALTKAQ---QLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CSEEEECSCHH---HHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEeccc---cHHHHHHHHHHhcCCCCEEEE
Confidence 79888754321 356788888888988876654
No 480
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=73.99 E-value=11 Score=34.23 Aligned_cols=80 Identities=14% Similarity=0.155 Sum_probs=53.7
Q ss_pred CCEEEEECCCCChHHHHHHhh---cC-CEEEEEeCCHHHHHHHHHHHHHcC--CCCCeEEEEcCCCCCC-----CCCCcc
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SR-ANVVGITINEYQVNRARLHNKKAG--LDSLCEVVCGNFLKMP-----FEDNHF 191 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~-~~v~g~D~s~~~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~-----~~~~~f 191 (359)
+++||=.|+ +|.++..+++. .| .+|+++|.++..+....+...... .+.++.++.+|+.+.. +....+
T Consensus 35 ~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 578888775 46666666652 35 699999999887765554443321 1246899999998742 223578
Q ss_pred ceEEeccccccc
Q 018194 192 DGAYSIEATCHA 203 (359)
Q Consensus 192 D~v~~~~~l~~~ 203 (359)
|+|+......|.
T Consensus 114 D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 114 DYVLNLSALKHV 125 (399)
T ss_dssp SEEEECCCCCCG
T ss_pred CEEEECCCcCCC
Confidence 999877766554
No 481
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=73.71 E-value=11 Score=31.85 Aligned_cols=79 Identities=20% Similarity=0.106 Sum_probs=52.3
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-CCCccc
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-EDNHFD 192 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~~fD 192 (359)
.++++|=.|++ |.++..+++. .|++|+.+|.++..++...+.....+....+.++..|+.+.. + .-+..|
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 35678877765 4455555442 478999999999887776666555443446788889987632 0 124689
Q ss_pred eEEeccccc
Q 018194 193 GAYSIEATC 201 (359)
Q Consensus 193 ~v~~~~~l~ 201 (359)
+++.+....
T Consensus 88 ~lv~nAg~~ 96 (267)
T 3t4x_A 88 ILINNLGIF 96 (267)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 988776554
No 482
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=73.29 E-value=11 Score=34.59 Aligned_cols=86 Identities=16% Similarity=0.108 Sum_probs=51.2
Q ss_pred CCCEEEEECCCC-ChHHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecccc
Q 018194 122 AGDRILDVGCGV-GGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEAT 200 (359)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 200 (359)
.|.+|.=+|.|. |......++..|++|+++|+++.....+.. .| ..+ .++.+. -...|+|+....-
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~----~G----~~~--~sL~ea---l~~ADVVilt~gt 276 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM----EG----YQV--LLVEDV---VEEAHIFVTTTGN 276 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHH---TTTCSEEEECSSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH----hC----Cee--cCHHHH---HhhCCEEEECCCC
Confidence 588999999874 444444444568999999999876544432 12 222 232221 1346888864433
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEE
Q 018194 201 CHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 201 ~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
.++-+ .+..+.+|||.+++-
T Consensus 277 ~~iI~-----~e~l~~MK~gAIVIN 296 (436)
T 3h9u_A 277 DDIIT-----SEHFPRMRDDAIVCN 296 (436)
T ss_dssp SCSBC-----TTTGGGCCTTEEEEE
T ss_pred cCccC-----HHHHhhcCCCcEEEE
Confidence 33222 245677899977663
No 483
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=72.84 E-value=10 Score=32.49 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=55.0
Q ss_pred CEEEEECCCC-Ch-HHHHHHhhcCCEEEEEeCCHHHHHHHHHHHHHc---------CCC--------CCeEEEEcCCCCC
Q 018194 124 DRILDVGCGV-GG-PMRAIAAHSRANVVGITINEYQVNRARLHNKKA---------GLD--------SLCEVVCGNFLKM 184 (359)
Q Consensus 124 ~~vLDiGcG~-G~-~~~~l~~~~~~~v~g~D~s~~~~~~a~~~~~~~---------~~~--------~~i~~~~~d~~~~ 184 (359)
.+|.=||+|. |. ++..++. .|.+|+++|.+++.++.+.+..... ++. .++.+ ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4788888875 22 3333333 4789999999999988877653211 110 01222 2222211
Q ss_pred CCCCCccceEEecccccccCCHHHHHHHHHhccCCCCEEE
Q 018194 185 PFEDNHFDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYV 224 (359)
Q Consensus 185 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 224 (359)
-...|+|+..-. ........+++++...++|+..++
T Consensus 83 ---~~~aDlVi~av~-~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 ---VKDADLVIEAVP-ESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ---TTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---hccCCEEEEecc-CcHHHHHHHHHHHHhhCCCCcEEE
Confidence 134688876432 111134677888999999987654
No 484
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=72.80 E-value=29 Score=30.09 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=51.1
Q ss_pred CCEEEEECCCC-Ch-HHHHHHhhcCC--EEEEEeCCHHHHHH-HHHHHHHcCCCCCeEEEEc-CCCCCCCCCCccceEEe
Q 018194 123 GDRILDVGCGV-GG-PMRAIAAHSRA--NVVGITINEYQVNR-ARLHNKKAGLDSLCEVVCG-NFLKMPFEDNHFDGAYS 196 (359)
Q Consensus 123 ~~~vLDiGcG~-G~-~~~~l~~~~~~--~v~g~D~s~~~~~~-a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~fD~v~~ 196 (359)
.++|.=||+|. |. ++..|+. .+. +|+.+|.++..++. +........+...+.+... |... -...|+|+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~-~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~aD~Vii 81 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ-RGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI----CRDADMVVI 81 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG----GTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHH----hCCCCEEEE
Confidence 46899999974 32 3333333 344 89999999876652 2211111111112333332 3221 135799887
Q ss_pred cccccccC--C-----------HHHHHHHHHhccCCCCEEEE
Q 018194 197 IEATCHAP--K-----------LEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 197 ~~~l~~~~--~-----------~~~~l~~~~~~LkpgG~l~~ 225 (359)
.--....+ + ...+++.+.+. .|++.++.
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 65333222 1 12566666664 78888775
No 485
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=72.74 E-value=12 Score=31.63 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=51.6
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----DN 189 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 189 (359)
++++|=.|++. .++..+++. .|++|+.++.++..++...+.....+ .++.++.+|+.+.. +. -+
T Consensus 4 ~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGASG-GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCcc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 55777777664 444444431 47899999999988887776666543 46888999998742 00 14
Q ss_pred ccceEEeccccc
Q 018194 190 HFDGAYSIEATC 201 (359)
Q Consensus 190 ~fD~v~~~~~l~ 201 (359)
..|+++.+..+.
T Consensus 81 ~iD~lVnnAG~~ 92 (264)
T 3tfo_A 81 RIDVLVNNAGVM 92 (264)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988776554
No 486
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=72.66 E-value=6.4 Score=33.43 Aligned_cols=101 Identities=17% Similarity=0.192 Sum_probs=61.8
Q ss_pred CCCEEEEECC-CCChHHHHHHhh---cCCEEEEEeCCHHH-HHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC----
Q 018194 122 AGDRILDVGC-GVGGPMRAIAAH---SRANVVGITINEYQ-VNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE---- 187 (359)
Q Consensus 122 ~~~~vLDiGc-G~G~~~~~l~~~---~~~~v~g~D~s~~~-~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 187 (359)
.++++|=.|+ |+|.++..+++. .|++|+.+|.++.. ++...+ . +..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---R--LPAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---T--SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH---h--cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence 3678998898 366666666552 47899999988653 232221 1 2346788999998742 10
Q ss_pred -CC---ccceEEecccccc--------c---C--CHH-----------HHHHHHHhccCCCCEEEEEE
Q 018194 188 -DN---HFDGAYSIEATCH--------A---P--KLE-----------DVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 -~~---~fD~v~~~~~l~~--------~---~--~~~-----------~~l~~~~~~LkpgG~l~~~~ 227 (359)
-+ ..|+++.+..... + + ++. .+.+.+...++++|.++.+.
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 02 7899887765432 1 1 111 24556666677778887654
No 487
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=72.65 E-value=13 Score=31.61 Aligned_cols=88 Identities=18% Similarity=0.247 Sum_probs=50.9
Q ss_pred CEEEEECCCC-Ch-HHHHHHhhcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC-ccceEEecc
Q 018194 124 DRILDVGCGV-GG-PMRAIAAHSRA--NVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDN-HFDGAYSIE 198 (359)
Q Consensus 124 ~~vLDiGcG~-G~-~~~~l~~~~~~--~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~fD~v~~~~ 198 (359)
++|.=||+|. |. ++..+++ .+. +|+++|.++..++.+++ .|... . ...|..+. -. ..|+|+..-
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~~~~~~~~~----~g~~~--~-~~~~~~~~---~~~~aDvVilav 70 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKV---EDFSPDFVMLSS 70 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHH----TTSCS--E-EESCGGGG---GGTCCSEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHh-cCCCcEEEEEeCCHHHHHHHHH----CCCcc--c-ccCCHHHH---hcCCCCEEEEcC
Confidence 3677888764 32 3333333 344 89999999988776543 23211 1 12232221 13 578887754
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 199 ATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 199 ~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
-.. ....++.++...++|+..++.
T Consensus 71 p~~---~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 71 PVR---TFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CHH---HHHHHHHHHHHHSCTTCEEEE
T ss_pred CHH---HHHHHHHHHHhhCCCCcEEEE
Confidence 222 345677888888999875553
No 488
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=72.23 E-value=15 Score=31.34 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=52.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCC-----CC-----
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGL-DSLCEVVCGNFLKMP-----FE----- 187 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~-----~~----- 187 (359)
.++++|=.|++. .++..+++. .|++|+.+|.++..++...+.....+. ..++.++.+|+.+.. +.
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGS-GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 366888888654 444444431 478999999999888777666655432 126889999998742 00
Q ss_pred CCccceEEecccc
Q 018194 188 DNHFDGAYSIEAT 200 (359)
Q Consensus 188 ~~~fD~v~~~~~l 200 (359)
.+..|+++.+...
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1467988877654
No 489
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=72.22 E-value=15 Score=30.27 Aligned_cols=89 Identities=8% Similarity=-0.046 Sum_probs=56.4
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceE
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP----FEDNHFDGA 194 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v 194 (359)
...+|+=+|+ |..+..+++. .+. |+++|.+++.++.++ . .+.++.+|..+.. ..-...|+|
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhcCcchhcEE
Confidence 3568998988 5677777653 345 999999998776553 1 3688999987632 123467888
Q ss_pred EecccccccCCHHHHHHHHHhccCCCCEEEE
Q 018194 195 YSIEATCHAPKLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 195 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 225 (359)
++...- +.....+....+.+.|+..++.
T Consensus 76 i~~~~~---d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 76 IVDLES---DSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp EECCSC---HHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEcCCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 774310 1123344555666788777765
No 490
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=72.14 E-value=15 Score=30.45 Aligned_cols=76 Identities=18% Similarity=0.128 Sum_probs=52.4
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-----EDN 189 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 189 (359)
++++|=.|++ |.++..+++. .|.+|++++.++..++...+.....+ .++.++.+|+.+.. + ..+
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5677777755 5555554442 47899999999988887777666554 46899999998742 0 124
Q ss_pred ccceEEeccccc
Q 018194 190 HFDGAYSIEATC 201 (359)
Q Consensus 190 ~fD~v~~~~~l~ 201 (359)
..|+++.+....
T Consensus 82 ~id~li~~Ag~~ 93 (247)
T 3lyl_A 82 AIDILVNNAGIT 93 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988776554
No 491
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=71.71 E-value=15 Score=31.38 Aligned_cols=77 Identities=13% Similarity=-0.004 Sum_probs=51.5
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.++++|=.|++.| ++..+++. .|++|++++.++..++...+.....+ .++.++.+|+.+.. +. -
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678888886654 44444431 47899999999988877766665543 46899999998742 00 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+++.+....
T Consensus 100 g~id~lv~nAg~~ 112 (279)
T 3sju_A 100 GPIGILVNSAGRN 112 (279)
T ss_dssp CSCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 4689988776553
No 492
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=71.54 E-value=31 Score=27.54 Aligned_cols=93 Identities=11% Similarity=0.098 Sum_probs=55.2
Q ss_pred CEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEeccc
Q 018194 124 DRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPF-EDNHFDGAYSIEA 199 (359)
Q Consensus 124 ~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~v~~~~~ 199 (359)
++||=.|+ +|.++..+++. .+.+|++++-++..++... .+++++.+|+.+... .-..+|+|+....
T Consensus 1 MkvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTLSDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CeEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhhhhhcCCCEEEECCc
Confidence 46776664 56666655542 4689999999876544321 358999999987531 0135799887665
Q ss_pred cccc--CCHHHHHHHHHhccCC--CCEEEEE
Q 018194 200 TCHA--PKLEDVYAEVFRVLKP--GSLYVSY 226 (359)
Q Consensus 200 l~~~--~~~~~~l~~~~~~Lkp--gG~l~~~ 226 (359)
.... ........++.+.++. .+++++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CCccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 4321 1123344455555544 3566654
No 493
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=71.33 E-value=10 Score=31.90 Aligned_cols=75 Identities=16% Similarity=0.078 Sum_probs=50.6
Q ss_pred CCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 018194 123 GDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----DN 189 (359)
Q Consensus 123 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 189 (359)
++++|=.|++ |.++..+++. .|++|+.+|.++..++...+..... ..++.++.+|+.+.. +. -+
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5677777765 4455444432 4789999999998887776665433 346899999998742 00 13
Q ss_pred ccceEEecccc
Q 018194 190 HFDGAYSIEAT 200 (359)
Q Consensus 190 ~fD~v~~~~~l 200 (359)
..|+++.+...
T Consensus 83 ~id~lv~nAg~ 93 (257)
T 3imf_A 83 RIDILINNAAG 93 (257)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998877654
No 494
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=71.18 E-value=18 Score=30.51 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=52.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.+++||=.|++ |.++..+++. .|.+|+++|.++..++...+.....+ .++.++.+|+.+.. +. -
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 45688877765 5555555542 47899999999887776655555443 46899999998742 00 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+.+|+|+.+....
T Consensus 107 g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 107 GDVSILVNNAGVV 119 (272)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 3689988776543
No 495
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=70.98 E-value=28 Score=30.20 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=48.1
Q ss_pred CEEEEECCCC-Ch-HHHHHHhhcCC--EEEEEeCCHHHHHH-HHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEecc
Q 018194 124 DRILDVGCGV-GG-PMRAIAAHSRA--NVVGITINEYQVNR-ARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIE 198 (359)
Q Consensus 124 ~~vLDiGcG~-G~-~~~~l~~~~~~--~v~g~D~s~~~~~~-a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 198 (359)
++|.=+|+|. |. ++..++. .+. +|+.+|++++.++. +............+.+...|... + ...|+|+...
T Consensus 1 mkI~VIGaG~vG~~la~~la~-~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a--~--~~aDvVIi~~ 75 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL-RGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSE--L--ADAQVVILTA 75 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGG--G--TTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHH--h--CCCCEEEEcC
Confidence 3677888864 22 2223333 244 89999999876653 22111111111123343334322 2 3468888765
Q ss_pred cccccC-------------CHHHHHHHHHhccCCCCEEEE
Q 018194 199 ATCHAP-------------KLEDVYAEVFRVLKPGSLYVS 225 (359)
Q Consensus 199 ~l~~~~-------------~~~~~l~~~~~~LkpgG~l~~ 225 (359)
.....+ -...+++.+.+. .|++++++
T Consensus 76 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 76 GANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred CCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 322111 124556666666 69998876
No 496
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=70.79 E-value=15 Score=31.41 Aligned_cols=76 Identities=17% Similarity=0.074 Sum_probs=51.5
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.+.++|=.|++.| ++..+++. .|++|+.+|.++..++...+.....+ .++.++.+|+.+.. +. -
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4668888886654 44444431 47899999999988777666554433 46889999998742 10 1
Q ss_pred CccceEEecccc
Q 018194 189 NHFDGAYSIEAT 200 (359)
Q Consensus 189 ~~fD~v~~~~~l 200 (359)
+..|+++.+...
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468998877665
No 497
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=70.78 E-value=14 Score=31.14 Aligned_cols=78 Identities=15% Similarity=0.058 Sum_probs=52.2
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.++++|=.|++ |.++..+++. .|++|+.+|.++..++...+.....+ ..++.++.+|+.+.. +. -
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35677766755 5555555442 47899999999988877766655443 246899999998742 00 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+++.+....
T Consensus 87 g~id~lvnnAg~~ 99 (262)
T 3pk0_A 87 GGIDVVCANAGVF 99 (262)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988776543
No 498
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=70.53 E-value=20 Score=29.85 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=50.7
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.+++||=.|++ |.++..+++. .|.+|+++|.++..++...+.....+ .++.++.+|+.+.. +. .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35688877755 5555555542 47899999999887766555554433 46899999998742 10 1
Q ss_pred CccceEEeccccc
Q 018194 189 NHFDGAYSIEATC 201 (359)
Q Consensus 189 ~~fD~v~~~~~l~ 201 (359)
+..|+|+.+....
T Consensus 89 ~~id~vi~~Ag~~ 101 (260)
T 3awd_A 89 GRVDILVACAGIC 101 (260)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988776543
No 499
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=70.47 E-value=16 Score=30.90 Aligned_cols=103 Identities=17% Similarity=0.074 Sum_probs=59.7
Q ss_pred CCCEEEEECCC-CChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----C
Q 018194 122 AGDRILDVGCG-VGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----F-----E 187 (359)
Q Consensus 122 ~~~~vLDiGcG-~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 187 (359)
.++++|=.|++ +|.++..+++. .|++|+.++.++...+..++.....+ ++.++.+|+.+.. + .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788988876 25555555542 47899999988752222222222222 3688899987732 0 0
Q ss_pred CCccceEEeccccccc----------C--CH-----------HHHHHHHHhccCCCCEEEEEE
Q 018194 188 DNHFDGAYSIEATCHA----------P--KL-----------EDVYAEVFRVLKPGSLYVSYE 227 (359)
Q Consensus 188 ~~~fD~v~~~~~l~~~----------~--~~-----------~~~l~~~~~~LkpgG~l~~~~ 227 (359)
-+..|+++.+...... + ++ ..+++.+...++++|+++.+.
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 1468998887654321 1 11 124455566666678887653
No 500
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=70.40 E-value=12 Score=31.83 Aligned_cols=78 Identities=14% Similarity=0.070 Sum_probs=53.0
Q ss_pred CCCEEEEECCCCChHHHHHHhh---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 018194 122 AGDRILDVGCGVGGPMRAIAAH---SRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMP-----FE-----D 188 (359)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 188 (359)
.++++|=.|++.| ++..+++. .|++|+.++.++..++...+.....+ .++.++.+|+.+.. +. -
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678888887654 44444431 47899999999888777766665543 46889999998742 10 1
Q ss_pred CccceEEecccccc
Q 018194 189 NHFDGAYSIEATCH 202 (359)
Q Consensus 189 ~~fD~v~~~~~l~~ 202 (359)
+..|+++.+.....
T Consensus 108 g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 108 GGIDIAVCNAGIVS 121 (276)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36899988766543
Done!