Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018197
MKFEPDVSPIESARARFLQIIVDHFINDHVIEVTDSGAEYSQQPGQDKLSKRKNRDVQYE
GDPRFALPLMYVANMYETLVNDVNLRLASFNGIREKTIGVALEAAGGLYRSLAKKFPKKG
SCTYKRRELATSLETRTRFPELVIQEEKRVRFVVVNGLDIVEKPNNMPIEDAEWFKRLTG
RNEVAISAQDYKFYSPRHKYRRVASNSVSNIPVLPGFPGTDNSSTMVTAQGFHTISEPQN
QQQTPSKHHMQPLSHQPQFHHIHNNHHQQIHQGQQHPAHFSQNHRCGPPPHLPDIAHAHQ
SPTISQHMACLQPLTGGHVGERLHVMPASPAKFCDECGAPYLRETSKFCSECGVKRLGI

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018197
        (359 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q96GY0 - symbol:ZC2HC1A "Zinc finger C2HC domai...   113  0.00072   1


>UNIPROTKB|Q96GY0 [details] [associations]
            symbol:ZC2HC1A "Zinc finger C2HC domain-containing protein
            1A" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
            evidence=IEA] GO:GO:0046872 EMBL:AC100854 CTD:51101
            eggNOG:NOG237524 HOGENOM:HOG000068024 HOVERGEN:HBG107871
            OrthoDB:EOG4SQWXV InterPro:IPR026319 PANTHER:PTHR13555
            EMBL:AF151820 EMBL:BC009074 IPI:IPI00329753 RefSeq:NP_057094.2
            UniGene:Hs.271876 ProteinModelPortal:Q96GY0 STRING:Q96GY0
            PhosphoSite:Q96GY0 DMDM:296434498 PaxDb:Q96GY0 PRIDE:Q96GY0
            DNASU:51101 Ensembl:ENST00000263849 GeneID:51101 KEGG:hsa:51101
            UCSC:uc003ybd.3 GeneCards:GC08P079579 H-InvDB:HIX0007605
            HGNC:HGNC:24277 HPA:HPA024726 neXtProt:NX_Q96GY0
            PharmGKB:PA162386952 InParanoid:Q96GY0 OMA:CGIRRMV PhylomeDB:Q96GY0
            GenomeRNAi:51101 NextBio:53813 Bgee:Q96GY0 CleanEx:HS_FAM164A
            Genevestigator:Q96GY0 Uniprot:Q96GY0
        Length = 325

 Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
 Identities = 22/49 (44%), Positives = 29/49 (59%)

Query:   310 CLQPLTGGHV-GERLHVMPASPAKFCDECGAPYLRETSKFCSECGVKRL 357
             C   L GG++ G   H  P +  KFC ECG  Y  E +KFC ECG++R+
Sbjct:   276 CASSLNGGNIKGIEGH-SPGNLPKFCHECGTKYPVEWAKFCCECGIRRM 323


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      359       334   0.00091  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  232 KB (2127 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.82u 0.11s 27.93t   Elapsed:  00:00:01
  Total cpu time:  27.82u 0.11s 27.93t   Elapsed:  00:00:01
  Start:  Sat May 11 00:04:36 2013   End:  Sat May 11 00:04:37 2013

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