Query 018198
Match_columns 359
No_of_seqs 401 out of 3543
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 11:28:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018198.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018198hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sti_A Protease DEGQ; serine p 100.0 6.6E-38 2.3E-42 282.5 17.5 204 154-358 14-238 (245)
2 3qo6_A Protease DO-like 1, chl 100.0 4.9E-37 1.7E-41 291.5 22.9 216 144-359 8-232 (348)
3 3lgi_A Protease DEGS; stress-s 100.0 7.7E-37 2.6E-41 275.2 22.0 206 153-359 20-231 (237)
4 1l1j_A Heat shock protease HTR 100.0 2.8E-37 9.5E-42 277.8 16.5 207 153-359 4-234 (239)
5 3stj_A Protease DEGQ; serine p 100.0 2.8E-36 9.5E-41 285.4 21.2 205 154-359 14-239 (345)
6 4a8c_A Periplasmic PH-dependen 100.0 2.5E-35 8.5E-40 287.5 26.0 206 153-359 13-239 (436)
7 3tjo_A Serine protease HTRA1; 100.0 4.7E-35 1.6E-39 262.3 19.5 203 146-353 24-230 (231)
8 1te0_A Protease DEGS; two doma 100.0 1.1E-34 3.6E-39 272.3 21.6 206 153-359 9-220 (318)
9 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.2E-34 4.1E-39 283.4 18.8 204 154-359 20-257 (451)
10 4fln_A Protease DO-like 2, chl 100.0 1.2E-33 4.2E-38 278.6 24.2 194 162-358 46-250 (539)
11 1ky9_A Protease DO, DEGP, HTRA 100.0 1.2E-33 4.1E-38 276.1 21.1 205 154-359 14-262 (448)
12 3num_A Serine protease HTRA1; 100.0 5.2E-33 1.8E-37 262.3 23.1 203 146-353 7-213 (332)
13 1y8t_A Hypothetical protein RV 100.0 3.6E-33 1.2E-37 262.6 21.6 197 154-359 7-228 (324)
14 1lcy_A HTRA2 serine protease; 100.0 1.2E-33 4.2E-38 265.7 17.0 199 151-354 13-215 (325)
15 3k6y_A Serine protease, possib 100.0 1.1E-31 3.8E-36 241.5 22.2 192 155-358 33-231 (237)
16 2as9_A Serine protease; trypsi 99.9 3.1E-24 1.1E-28 189.3 15.4 158 186-354 23-204 (210)
17 2w5e_A Putative serine proteas 99.9 2.5E-23 8.5E-28 175.4 17.4 136 185-340 20-155 (163)
18 1agj_A Epidermolytic toxin A; 99.9 2E-22 6.8E-27 181.5 15.2 158 186-351 55-240 (242)
19 2w7s_A Serine protease SPLA; h 99.9 3.8E-22 1.3E-26 174.4 11.3 155 187-352 23-198 (200)
20 2o8l_A V8 protease, taphylococ 99.9 9.5E-21 3.2E-25 173.6 19.9 177 162-357 18-215 (274)
21 1wcz_A Glutamyl endopeptidase; 99.9 1.5E-20 5E-25 171.9 18.1 177 162-357 18-215 (268)
22 2h5c_A Alpha-lytic protease; s 99.9 1.7E-20 6E-25 163.3 17.3 154 187-348 17-191 (198)
23 2vid_A Serine protease SPLB; h 99.8 1.8E-20 6.1E-25 164.0 16.1 155 187-352 23-202 (204)
24 2qa9_E Streptogrisin-B; chymot 99.8 5.6E-19 1.9E-23 152.4 15.5 158 186-349 12-181 (185)
25 1qtf_A Exfoliative toxin B; se 99.8 5.3E-20 1.8E-24 166.1 9.4 132 186-328 48-205 (246)
26 2oua_A Serine protease, protei 99.8 1.3E-18 4.4E-23 150.3 17.2 152 187-348 15-182 (188)
27 1hpg_A Glutamic acid specific 99.8 1.1E-18 3.8E-23 150.7 16.5 155 187-348 14-182 (187)
28 2ea3_A Chymotrypsin; celloulom 99.8 8.9E-18 3.1E-22 145.0 17.1 148 187-348 17-176 (189)
29 2pfe_A Protease A, alkaline se 99.8 7.1E-18 2.4E-22 145.2 13.9 150 187-348 16-179 (186)
30 2sga_A Proteinase A; hydrolase 99.7 3.1E-17 1E-21 141.0 12.1 150 187-349 13-177 (181)
31 1mbm_A NSP4 proteinase, chymot 99.7 3.2E-17 1.1E-21 136.7 10.9 117 184-328 13-132 (198)
32 1pq7_A Trypsin; ultra-high res 99.6 2E-14 6.8E-19 127.4 18.9 178 162-351 11-223 (224)
33 4ag1_A Chymase; hydrolase-de n 99.6 1.1E-13 3.8E-18 122.6 23.7 181 162-354 11-225 (226)
34 1a7s_A Heparin binding protein 99.6 7.9E-14 2.7E-18 123.6 22.2 178 162-355 11-220 (225)
35 1cgh_A Cathepsin G; inflammati 99.6 3.8E-14 1.3E-18 125.7 19.9 179 162-353 11-223 (224)
36 1npm_A Neuropsin; serine prote 99.6 7.3E-14 2.5E-18 123.9 21.5 175 162-352 11-224 (225)
37 1mza_A Pro-granzyme K; apoptos 99.6 6.7E-14 2.3E-18 125.3 20.9 179 162-353 13-235 (240)
38 1eq9_A Chymotrypsin; FIRE ANT, 99.6 3.3E-14 1.1E-18 125.9 18.5 179 162-353 11-221 (222)
39 2zch_P Prostate-specific antig 99.6 8E-14 2.7E-18 124.6 20.6 179 162-354 11-235 (237)
40 3rp2_A RAT MAST cell protease 99.6 1.3E-13 4.6E-18 121.8 21.7 180 161-352 10-223 (224)
41 1iau_A Granzyme B; hydrolase-h 99.6 4.6E-14 1.6E-18 125.3 18.5 179 162-353 11-225 (227)
42 3fzz_A Granzyme C; hydrolase, 99.6 1.5E-13 5E-18 121.9 21.4 180 162-353 11-226 (227)
43 1fuj_A PR3, myeloblastin; hydr 99.6 2.4E-13 8.1E-18 120.1 22.6 178 162-353 11-221 (221)
44 1fxy_A Coagulation factor XA-t 99.6 5.6E-14 1.9E-18 124.9 18.4 179 162-353 11-225 (228)
45 1azz_A Collagenase; complex (s 99.6 7.3E-14 2.5E-18 124.0 18.7 178 162-353 11-223 (226)
46 3h7t_A Group 3 allergen smipp- 99.6 7.6E-14 2.6E-18 124.1 18.7 180 162-354 11-230 (235)
47 2xw9_A Complement factor D; im 99.6 1.2E-13 4.3E-18 122.5 19.9 178 162-352 11-227 (228)
48 2z7f_E Leukocyte elastase; ser 99.6 1.3E-13 4.5E-18 121.6 19.9 174 162-352 11-217 (218)
49 1lo6_A Kallikrein 6, HK6; seri 99.6 1.8E-13 6.3E-18 121.1 20.7 177 162-354 11-222 (223)
50 1hj8_A Trypsin I; hydrolase, r 99.6 1.6E-13 5.4E-18 121.5 19.9 175 162-353 11-220 (222)
51 3mfj_A Cationic trypsin; serin 99.6 1.4E-13 5E-18 121.8 19.6 175 162-353 11-221 (223)
52 1bru_P Elastase, PPE; serine p 99.6 2.7E-13 9.2E-18 121.5 21.5 184 162-353 11-239 (241)
53 4i8h_A Cationic trypsin, beta- 99.6 1.9E-13 6.5E-18 120.9 20.0 176 162-354 11-222 (223)
54 3s9c_A Vipera russelli protein 99.6 2.4E-13 8.1E-18 121.1 20.8 181 162-356 11-228 (234)
55 2bdg_A Kallikrein-4; serine pr 99.6 1.9E-13 6.3E-18 121.1 19.9 176 162-353 11-222 (223)
56 1p3c_A Glutamyl-endopeptidase; 99.6 2.6E-14 9E-19 125.8 14.0 160 186-353 30-214 (215)
57 3fan_A Non-structural protein; 99.6 2.6E-15 8.9E-20 127.2 7.0 118 185-328 29-146 (213)
58 1gvz_A Kallikrein-1E2; antigen 99.6 6.1E-14 2.1E-18 125.3 16.5 176 162-353 11-234 (237)
59 4e7n_A Snake-venom thrombin-li 99.6 1.5E-13 5.1E-18 122.6 19.0 182 162-355 11-231 (238)
60 1ton_A Tonin; hydrolase(serine 99.6 2.5E-13 8.5E-18 121.2 20.3 175 162-354 11-233 (235)
61 1ao5_A Glandular kallikrein-13 99.6 1.9E-13 6.6E-18 122.1 19.5 176 162-353 11-234 (237)
62 1gvk_B Elastase 1, peptide inh 99.6 2.6E-13 8.8E-18 121.5 20.2 184 162-353 11-238 (240)
63 3s69_A Thrombin-like enzyme de 99.6 1.9E-13 6.4E-18 121.7 19.1 180 162-355 11-227 (234)
64 1euf_A Duodenase; serine prote 99.6 3E-13 1E-17 120.1 20.3 179 162-353 11-224 (227)
65 1elt_A Elastase; serine protei 99.6 1.5E-13 5.2E-18 122.6 18.4 182 162-351 11-235 (236)
66 1ym0_A Fibrinotic enzyme compo 99.6 3.8E-13 1.3E-17 120.1 21.0 183 162-354 11-237 (238)
67 1orf_A Granzyme A; hydrolase-h 99.6 3E-13 1E-17 120.6 20.1 178 162-353 11-231 (234)
68 1si5_H Scatter factor, hepatoc 99.6 8.7E-13 3E-17 118.0 23.1 182 162-355 10-229 (240)
69 1spj_A Kallikrein 1; serine pr 99.6 3.4E-13 1.2E-17 120.4 19.8 177 162-354 11-236 (238)
70 2psx_A Kallikrein-5; zinc inhi 99.6 5E-13 1.7E-17 118.6 20.5 178 162-354 11-225 (227)
71 2qxi_A Kallikrein-7; S1 pocket 99.5 2.9E-13 1E-17 119.9 18.8 177 162-354 11-222 (224)
72 2aiq_A Protein C activator; sn 99.5 2.4E-13 8.2E-18 121.0 18.1 178 162-354 11-223 (231)
73 2zgc_A Granzyme M; serine prot 99.5 5E-13 1.7E-17 119.7 20.1 181 162-355 11-231 (240)
74 2hlc_A Collagenase; serine pro 99.5 2.9E-13 9.9E-18 120.3 18.1 183 162-353 11-227 (230)
75 3h7o_A Group 3 allergen smipp- 99.5 1.2E-13 4E-18 122.5 15.4 183 162-354 10-227 (228)
76 1m9u_A Earthworm fibrinolytic 99.5 2E-13 6.8E-18 122.2 16.6 181 162-351 11-240 (241)
77 1aut_C Activated protein C; se 99.5 4.9E-13 1.7E-17 120.4 19.2 182 162-354 11-240 (250)
78 2asu_B Hepatocyte growth facto 99.5 8.2E-13 2.8E-17 117.8 20.4 181 163-354 9-227 (234)
79 3beu_A Trypsin, SGT; beta shee 99.5 1.3E-12 4.5E-17 115.5 21.1 164 187-353 21-222 (224)
80 2oq5_A Transmembrane protease, 99.5 1.4E-12 4.9E-17 116.0 21.3 179 162-352 11-230 (232)
81 3mhw_U Urokinase-type plasmino 99.5 7.9E-13 2.7E-17 118.5 19.7 185 162-353 11-246 (247)
82 3ncl_A Suppressor of tumorigen 99.5 9.5E-13 3.2E-17 117.6 19.7 180 162-352 11-239 (241)
83 1pyt_D TC, PCPA-TC, chymotryps 99.5 1E-12 3.5E-17 118.5 19.9 185 161-353 23-250 (251)
84 3gov_B MAsp-1; complement, ser 99.5 1.3E-12 4.6E-17 117.2 20.4 180 162-353 11-248 (251)
85 2r0l_A Hepatocyte growth facto 99.5 1.3E-12 4.5E-17 117.3 20.3 180 162-354 11-240 (248)
86 1rtf_B (TC)-T-PA, two chain ti 99.5 2E-12 7E-17 116.3 21.5 186 162-353 11-251 (252)
87 2any_A Kininogenin, plasma kal 99.5 9.2E-13 3.1E-17 117.9 19.0 184 162-354 11-237 (241)
88 2fgc_A Acetolactate synthase, 99.5 3.4E-14 1.2E-18 120.6 8.8 91 43-133 28-122 (193)
89 1sgf_A 7S NGF, nerve growth fa 99.5 3.4E-13 1.2E-17 120.7 15.9 178 161-354 13-238 (240)
90 2f91_A Hepatopancreas trypsin; 99.5 2.3E-12 7.7E-17 115.1 21.2 181 162-351 11-235 (237)
91 3bg8_A Coagulation factor XIA 99.5 8.9E-13 3.1E-17 117.8 17.9 183 162-353 11-236 (238)
92 3tvj_B Mannan-binding lectin s 99.5 9.9E-13 3.4E-17 117.4 18.0 178 162-353 11-240 (242)
93 2jde_A Urokinase-type plasmino 99.5 1.8E-12 6.3E-17 118.3 19.9 185 162-353 34-269 (276)
94 2olg_A Pro-phenoloxidase activ 99.5 1.8E-12 6.1E-17 118.6 19.8 185 161-352 32-276 (278)
95 3gyl_B Prostasin; ENAC, zymoge 99.5 1.6E-12 5.6E-17 117.5 19.2 181 162-354 11-243 (261)
96 3ri6_A O-acetylhomoserine sulf 99.5 1.9E-15 6.4E-20 147.0 -0.8 111 1-125 207-337 (430)
97 1t8o_A Chymotrypsin A; chymotr 99.5 3.9E-12 1.3E-16 114.2 20.8 181 161-353 25-243 (245)
98 1fon_A Procarboxypeptidase A-S 99.5 3.5E-13 1.2E-17 120.6 13.8 184 162-353 9-238 (240)
99 2jkh_A Activated factor XA hea 99.5 1E-12 3.5E-17 117.6 16.8 182 162-354 11-234 (241)
100 1ddj_A Plasminogen; catalytic 99.5 4.4E-12 1.5E-16 113.9 20.9 183 161-354 27-246 (247)
101 2qy0_B Complement C1R subcompo 99.5 7.4E-13 2.5E-17 118.5 15.5 166 187-354 23-240 (242)
102 1yc0_A Hepatocyte growth facto 99.5 2.3E-12 8E-17 118.2 19.1 181 161-354 45-275 (283)
103 2f9n_A Alpha I tryptase; serin 99.5 1.7E-12 5.8E-17 116.5 17.5 184 162-354 11-243 (245)
104 4dgj_A Enteropeptidase catalyt 99.5 1.7E-12 5.7E-17 115.6 17.1 179 162-352 11-234 (235)
105 2pc6_A Probable acetolactate s 99.5 1.7E-13 5.8E-18 114.4 9.7 114 43-170 3-118 (165)
106 4f4o_C Haptoglobin; globin fol 99.5 1.6E-12 5.5E-17 122.7 16.7 182 161-354 112-346 (347)
107 1fiw_A Beta-acrosin heavy chai 99.5 9E-12 3.1E-16 114.7 21.2 186 162-353 11-249 (290)
108 2bdy_A Thrombin; thrombin, com 99.4 2.3E-12 7.9E-17 118.6 17.0 182 162-353 41-285 (289)
109 2wph_S Coagulation factor IXA 99.4 2.3E-12 8E-17 114.8 16.0 180 162-353 11-233 (235)
110 2bz6_H Blood coagulation facto 99.4 3.9E-12 1.3E-16 114.7 17.6 181 162-354 11-241 (254)
111 3rm2_H Thrombin heavy chain; s 99.4 3.8E-12 1.3E-16 114.7 17.5 182 162-353 11-255 (259)
112 3f1s_B Vitamin K-dependent pro 99.4 2.4E-12 8.2E-17 118.1 16.1 184 160-354 61-277 (283)
113 1z8g_A Serine protease hepsin; 99.4 9.6E-12 3.3E-16 118.6 20.1 182 161-354 127-361 (372)
114 2f1f_A Acetolactate synthase i 99.4 6.5E-13 2.2E-17 110.9 9.5 114 43-170 2-117 (164)
115 3cp7_A Alkaline serine proteas 99.4 5.1E-12 1.8E-16 111.5 15.6 176 162-353 5-216 (218)
116 3h5c_B Vitamin K-dependent pro 99.4 4.6E-12 1.6E-16 118.1 16.0 181 161-352 103-316 (317)
117 1zyo_A Serine protease; beta-b 99.4 4.5E-12 1.5E-16 108.6 14.2 162 162-347 14-185 (191)
118 3nmy_A Xometc, cystathionine g 99.4 1.2E-14 4E-19 140.2 -2.8 101 2-117 193-294 (400)
119 2b9l_A Prophenoloxidase activa 99.4 1.2E-11 3.9E-16 118.8 17.4 191 161-355 140-385 (394)
120 1md8_A C1R complement serine p 99.4 7.5E-12 2.6E-16 117.3 15.5 165 187-353 112-328 (329)
121 2vnt_A Urokinase-type plasmino 99.4 6.5E-11 2.2E-15 107.9 21.4 187 161-354 33-270 (276)
122 1zjk_A Mannan-binding lectin s 99.3 2.7E-11 9.3E-16 116.7 17.6 179 161-353 171-401 (403)
123 1elv_A Complement C1S componen 99.3 2.7E-11 9.3E-16 113.7 16.4 165 187-354 104-326 (333)
124 1arb_A Achromobacter protease 99.3 1.7E-11 6E-16 111.2 14.1 144 160-328 19-213 (268)
125 2xxl_A GRAM-positive specific 99.3 7.5E-11 2.6E-15 113.6 19.1 186 161-354 128-374 (408)
126 1gpz_A Complement C1R componen 99.3 4.9E-11 1.7E-15 114.7 15.9 166 187-354 180-397 (399)
127 3nxp_A Prethrombin-1; alloster 99.3 2.1E-11 7.1E-16 118.3 11.5 182 162-353 176-420 (424)
128 3ndn_A O-succinylhomoserine su 99.3 2.4E-13 8.2E-18 131.6 -2.3 101 2-117 207-307 (414)
129 4dur_A Plasminogen, serine pro 99.2 3.2E-10 1.1E-14 117.3 19.5 182 162-354 572-790 (791)
130 1rrk_A Complement factor B; BB 99.2 2.8E-11 9.6E-16 119.5 10.8 187 163-357 226-494 (497)
131 1qgn_A Protein (cystathionine 99.2 1E-12 3.5E-17 128.2 0.1 101 1-117 240-340 (445)
132 2fq6_A Cystathionine beta-lyas 99.2 2.4E-12 8.2E-17 124.5 0.9 100 2-117 210-309 (415)
133 3hrz_D Complement factor B; se 99.2 5.6E-11 1.9E-15 123.1 11.1 185 163-355 468-734 (741)
134 2f83_A Coagulation factor XI; 99.2 1.4E-10 4.7E-15 117.7 12.2 183 161-352 397-622 (625)
135 3qhx_A Cystathionine gamma-syn 99.1 5.1E-12 1.8E-16 121.2 -0.1 101 2-117 192-292 (392)
136 2xrc_A Human complement factor 99.1 4.5E-10 1.5E-14 112.7 14.1 167 187-354 346-557 (565)
137 3cog_A Cystathionine gamma-lya 99.1 8.6E-12 2.9E-16 120.2 -0.1 101 2-117 193-293 (403)
138 2odp_A Complement C2; C3/C5 co 99.0 2.4E-10 8E-15 113.3 7.6 179 163-353 235-501 (509)
139 3i16_A Aluminum resistance pro 99.0 6.2E-11 2.1E-15 114.9 0.8 106 2-126 223-333 (427)
140 3acz_A Methionine gamma-lyase; 99.0 6.2E-11 2.1E-15 113.4 0.0 101 2-117 185-285 (389)
141 3mmg_A Nuclear inclusion prote 98.9 8.9E-08 3E-12 83.5 17.0 163 162-342 14-183 (241)
142 1yph_C Chymotrypsin A, chain B 98.8 3.7E-08 1.3E-12 79.3 11.7 98 162-271 11-128 (131)
143 3hvy_A Cystathionine beta-lyas 98.8 6E-10 2E-14 108.0 0.7 106 2-126 223-333 (427)
144 2pka_B Kallikrein A; serine pr 98.8 8.4E-08 2.9E-12 79.3 12.8 121 231-353 6-149 (152)
145 1lvm_A Catalytic domain of the 98.7 1.4E-06 4.7E-11 75.5 17.2 174 161-352 21-202 (229)
146 1ibj_A CBL, cystathionine beta 98.6 3.1E-09 1.1E-13 104.1 0.1 100 2-116 258-357 (464)
147 3jzl_A Putative cystathionine 98.6 6.5E-09 2.2E-13 100.1 0.6 103 5-126 210-316 (409)
148 1gc0_A Methionine gamma-lyase; 98.6 3.1E-09 1.1E-13 101.8 -1.7 100 3-117 192-292 (398)
149 1e5e_A MGL, methionine gamma-l 98.6 1.3E-08 4.3E-13 97.9 1.4 100 3-117 190-290 (404)
150 2ctz_A O-acetyl-L-homoserine s 98.6 1E-08 3.5E-13 99.1 0.7 100 3-117 187-317 (421)
151 1n8p_A Cystathionine gamma-lya 98.4 1.6E-08 5.3E-13 96.9 -2.3 96 6-116 187-283 (393)
152 2cb1_A O-acetyl homoserine sul 98.1 3.8E-07 1.3E-11 87.6 1.0 99 4-117 184-309 (412)
153 2rfv_A Methionine gamma-lyase; 98.1 4.6E-07 1.6E-11 86.5 0.2 100 3-117 191-291 (398)
154 2hal_A Hepatitis A protease 3C 98.0 0.00015 5.3E-09 62.9 15.3 173 157-342 4-205 (212)
155 3zve_A 3C protease; hydrolase, 97.8 0.0008 2.7E-08 57.1 15.5 143 187-341 24-174 (190)
156 1pff_A Methionine gamma-lyase; 97.8 1.8E-06 6.1E-11 79.9 -1.3 97 5-116 128-225 (331)
157 3qzr_A 3C protein; chymotrypsi 97.8 0.0028 9.5E-08 53.4 18.2 157 162-341 15-178 (187)
158 1cs1_A CGS, protein (cystathio 97.8 2.8E-06 9.5E-11 80.6 -0.2 98 4-116 180-277 (386)
159 3q3y_A HEVB EV93 3C protease; 97.8 0.0022 7.4E-08 54.0 17.0 157 162-341 13-176 (191)
160 3ht4_A Aluminum resistance pro 97.8 2.1E-06 7.1E-11 83.2 -1.7 89 6-110 217-309 (431)
161 4dcd_A Protease 3C, genome pol 97.7 0.0013 4.5E-08 55.4 15.1 143 186-341 30-181 (190)
162 2b0f_A Picornain 3C (protease 97.6 0.0014 4.7E-08 55.2 14.0 140 188-341 25-173 (182)
163 1cqq_A Type 2 rhinovirus 3C pr 97.6 0.0053 1.8E-07 51.6 17.1 142 187-341 24-174 (180)
164 2bhg_A Foot-and-mouth disease 97.6 0.00033 1.1E-08 60.6 9.6 146 187-340 31-194 (209)
165 2pka_A Kallikrein A; serine pr 97.3 0.00095 3.3E-08 48.2 8.0 37 162-210 11-47 (80)
166 2ijd_1 Picornain 3C, RNA-direc 96.9 0.033 1.1E-06 56.3 16.9 142 187-341 24-174 (644)
167 1yph_E Chymotrypsin A, chain C 96.6 0.0045 1.6E-07 46.4 6.3 51 303-353 41-95 (97)
168 2ko1_A CTR148A, GTP pyrophosph 96.4 0.018 6.3E-07 41.7 8.5 71 46-117 7-78 (88)
169 4ash_A NS6 protease; hydrolase 96.0 0.044 1.5E-06 43.7 9.1 136 186-333 15-168 (185)
170 1wxr_A Haemoglobin protease; h 95.8 0.046 1.6E-06 57.2 10.8 80 186-270 56-144 (1048)
171 2fyq_A Chymotrypsin-like cyste 95.1 0.13 4.4E-06 41.2 8.9 138 186-333 26-179 (194)
172 3ju7_A Putative PLP-dependent 94.9 0.0035 1.2E-07 59.1 -0.8 82 12-111 179-274 (377)
173 2fp7_B Serine protease NS3; fl 94.0 0.075 2.6E-06 43.1 5.2 116 186-327 20-138 (172)
174 2ggv_B NS3, non-structural pro 94.0 0.076 2.6E-06 43.5 5.2 134 161-327 16-152 (185)
175 2fom_B Polyprotein; flavivirus 93.9 0.11 3.9E-06 42.6 6.1 135 160-327 16-153 (185)
176 3e90_B NS3 protease; trypsin-l 93.8 0.11 3.8E-06 42.9 6.0 136 160-328 20-158 (198)
177 3u1j_B Serine protease NS3; se 93.7 0.17 5.9E-06 41.6 6.9 136 160-328 25-163 (191)
178 1zpv_A ACT domain protein; str 93.3 0.22 7.5E-06 36.2 6.6 66 45-111 6-72 (91)
179 3lkw_A Fusion protein of nonst 93.1 0.16 5.4E-06 43.2 6.0 131 165-328 71-204 (236)
180 2aeu_A Hypothetical protein MJ 92.9 0.0071 2.4E-07 56.8 -2.9 63 8-75 194-256 (374)
181 1ep5_B Capsid protein C, coat 92.7 0.11 3.7E-06 40.3 3.9 31 299-329 98-128 (157)
182 1vcp_A Semliki forest virus ca 92.5 0.27 9.3E-06 37.6 5.9 31 299-329 91-121 (149)
183 4agk_A Capsid protein, coat pr 92.3 0.17 5.8E-06 39.2 4.6 29 301-329 101-129 (158)
184 2yew_A Capsid protein, coat pr 91.8 0.3 1E-05 41.4 6.0 29 301-329 197-225 (253)
185 1svp_A Sindbis virus capsid pr 91.8 0.37 1.3E-05 37.5 5.9 30 300-329 101-130 (161)
186 1u8s_A Glycine cleavage system 91.1 0.5 1.7E-05 39.7 6.9 64 45-109 7-70 (192)
187 1kxf_A Sindbis virus capsid pr 90.4 0.39 1.3E-05 41.0 5.4 29 301-329 207-235 (264)
188 3hbx_A GAD 1, glutamate decarb 89.0 0.12 4.1E-06 50.5 1.4 87 11-113 266-366 (502)
189 1y7p_A Hypothetical protein AF 89.0 1 3.5E-05 38.6 6.9 72 46-119 6-81 (223)
190 3su6_A NS3 protease, NS4A prot 88.7 0.57 2E-05 38.5 5.0 43 303-345 154-197 (203)
191 3nyt_A Aminotransferase WBPE; 87.0 0.11 3.9E-06 48.0 -0.2 84 8-108 167-266 (367)
192 1sc6_A PGDH, D-3-phosphoglycer 86.3 2.3 7.9E-05 40.2 8.5 71 46-117 333-403 (404)
193 2f06_A Conserved hypothetical 85.8 2.5 8.5E-05 33.4 7.4 59 43-104 5-64 (144)
194 3k5p_A D-3-phosphoglycerate de 80.3 5.1 0.00017 37.9 8.2 71 45-116 344-414 (416)
195 3uwc_A Nucleotide-sugar aminot 77.6 0.58 2E-05 43.0 0.7 28 13-42 176-205 (374)
196 2oga_A Transaminase; PLP-depen 76.6 0.4 1.4E-05 44.8 -0.7 81 13-110 202-296 (399)
197 3pj0_A LMO0305 protein; struct 73.0 0.41 1.4E-05 43.7 -1.7 31 8-41 194-224 (359)
198 2fnu_A Aminotransferase; prote 69.7 0.68 2.3E-05 42.4 -1.0 80 14-111 173-270 (375)
199 1ygy_A PGDH, D-3-phosphoglycer 69.3 9.5 0.00032 37.3 7.1 71 45-117 455-526 (529)
200 1jg8_A L-ALLO-threonine aldola 68.3 0.39 1.4E-05 43.6 -2.9 82 8-108 189-272 (347)
201 3mc6_A Sphingosine-1-phosphate 68.1 1.5 5.1E-05 42.2 1.0 35 6-42 264-298 (497)
202 3frk_A QDTB; aminotransferase, 68.0 0.94 3.2E-05 41.7 -0.4 31 10-42 170-204 (373)
203 2e7j_A SEP-tRNA:Cys-tRNA synth 67.3 1.4 4.8E-05 40.2 0.7 32 8-41 195-226 (371)
204 2o8m_A Protease; NS3, NS4A, vi 67.1 9.5 0.00032 31.7 5.5 42 305-347 146-189 (200)
205 2a7v_A Serine hydroxymethyltra 66.8 4.2 0.00014 39.4 4.0 33 4-40 249-281 (490)
206 3lvm_A Cysteine desulfurase; s 65.8 2.7 9.2E-05 39.1 2.3 33 7-42 210-242 (423)
207 2dgk_A GAD-beta, GADB, glutama 64.4 2.8 9.6E-05 39.8 2.2 27 12-40 252-278 (452)
208 3op7_A Aminotransferase class 64.1 0.88 3E-05 41.8 -1.4 88 11-111 211-298 (375)
209 4hvk_A Probable cysteine desul 63.0 1.9 6.6E-05 39.2 0.7 19 10-28 187-205 (382)
210 1z8r_A Coxsackievirus B4 polyp 62.4 16 0.00054 29.5 5.8 32 296-328 113-144 (166)
211 3hl2_A O-phosphoseryl-tRNA(SEC 61.5 1.2 4.1E-05 42.9 -1.0 98 7-128 268-375 (501)
212 2nyi_A Unknown protein; protei 60.0 16 0.00054 30.4 5.9 63 45-108 6-72 (195)
213 3lws_A Aromatic amino acid bet 58.7 1.1 3.8E-05 40.8 -1.8 82 10-111 194-278 (357)
214 2hrv_A 2A cysteine proteinase; 58.2 18 0.0006 28.5 5.3 31 297-328 94-124 (142)
215 1elu_A L-cysteine/L-cystine C- 55.6 5.4 0.00018 36.4 2.4 31 10-42 208-238 (390)
216 1b9h_A AHBA synthase, protein 53.9 2.2 7.7E-05 39.2 -0.6 80 14-111 178-276 (388)
217 1y96_A Gemin6, SIP2, GEM-assoc 53.5 47 0.0016 23.8 6.5 33 210-242 18-51 (86)
218 2nzc_A Hypothetical protein; s 51.9 23 0.00079 25.4 4.6 68 47-115 10-79 (86)
219 1lc5_A COBD, L-threonine-O-3-p 51.7 4.7 0.00016 36.7 1.3 85 11-111 205-290 (364)
220 3by8_A Sensor protein DCUS; hi 47.8 17 0.00059 28.3 3.9 30 311-351 111-140 (142)
221 3ke3_A Putative serine-pyruvat 47.7 8.2 0.00028 35.4 2.3 33 7-41 184-216 (379)
222 2c81_A Glutamine-2-deoxy-scyll 47.6 2.8 9.6E-05 39.1 -1.0 25 13-40 181-207 (418)
223 2po3_A 4-dehydrase; external a 46.3 2.6 8.7E-05 39.6 -1.5 32 8-42 184-217 (424)
224 3s6n_G Small nuclear ribonucle 45.2 44 0.0015 23.0 5.3 33 210-242 15-47 (76)
225 1i4k_A Putative snRNP SM-like 44.7 48 0.0016 22.8 5.5 60 210-271 15-74 (77)
226 1h64_1 SnRNP SM-like protein; 44.6 45 0.0015 22.8 5.3 33 210-242 15-47 (75)
227 3euc_A Histidinol-phosphate am 44.3 8.5 0.00029 34.8 1.8 86 10-112 215-300 (367)
228 1d3b_B Protein (small nuclear 43.5 42 0.0014 24.0 5.2 33 210-242 15-47 (91)
229 4esy_A CBS domain containing m 43.5 13 0.00046 29.6 2.7 23 306-328 47-69 (170)
230 4hcz_A PHD finger protein 1; p 43.0 68 0.0023 21.0 6.8 39 206-244 4-42 (58)
231 3f9t_A TDC, L-tyrosine decarbo 43.0 7.7 0.00026 35.3 1.2 29 12-42 236-264 (397)
232 1th7_A SnRNP-2, small nuclear 42.8 47 0.0016 23.2 5.2 33 210-242 20-52 (81)
233 2dr1_A PH1308 protein, 386AA l 42.3 13 0.00046 33.6 2.8 31 9-41 195-225 (386)
234 3nrb_A Formyltetrahydrofolate 42.3 36 0.0012 30.2 5.5 64 45-108 8-72 (287)
235 3mad_A Sphingosine-1-phosphate 42.3 8.7 0.0003 37.0 1.6 34 7-42 297-330 (514)
236 3tqx_A 2-amino-3-ketobutyrate 42.0 2.6 8.8E-05 38.8 -2.2 57 12-73 235-293 (399)
237 1mdo_A ARNB aminotransferase; 41.5 3.4 0.00012 37.9 -1.4 28 11-41 174-204 (393)
238 2w8t_A SPT, serine palmitoyltr 40.9 6.1 0.00021 37.0 0.2 81 11-108 253-335 (427)
239 1fc4_A 2-amino-3-ketobutyrate 40.6 3.3 0.00011 38.2 -1.7 56 11-72 236-294 (401)
240 3fkd_A L-threonine-O-3-phospha 39.7 8.4 0.00029 34.7 0.9 83 10-111 185-270 (350)
241 3o1l_A Formyltetrahydrofolate 39.7 62 0.0021 28.9 6.7 64 45-108 23-89 (302)
242 3obi_A Formyltetrahydrofolate 39.6 57 0.0019 29.0 6.4 65 45-109 7-74 (288)
243 1mgq_A SM-like protein; LSM, R 39.5 59 0.002 22.8 5.3 33 210-242 26-58 (83)
244 2lqj_A Mg2+ transport protein; 39.5 1.1E+02 0.0036 22.2 7.6 53 65-117 31-86 (94)
245 2x3l_A ORN/Lys/Arg decarboxyla 39.5 15 0.00052 34.7 2.8 34 7-42 196-229 (446)
246 3n0v_A Formyltetrahydrofolate 38.8 61 0.0021 28.7 6.4 65 45-109 9-75 (286)
247 4emk_B U6 snRNA-associated SM- 38.7 52 0.0018 22.6 4.8 33 210-242 15-47 (75)
248 3s6n_F Small nuclear ribonucle 38.6 66 0.0022 22.8 5.5 61 209-271 16-76 (86)
249 1d3b_A Protein (small nuclear 38.4 71 0.0024 21.9 5.5 33 210-242 16-48 (75)
250 3kki_A CAI-1 autoinducer synth 38.3 4.3 0.00015 37.7 -1.4 28 11-42 245-272 (409)
251 3lou_A Formyltetrahydrofolate 38.1 63 0.0021 28.8 6.4 64 45-108 11-79 (292)
252 3e2y_A Kynurenine-oxoglutarate 37.9 3.8 0.00013 37.9 -1.8 58 11-71 229-286 (410)
253 1t3i_A Probable cysteine desul 37.8 13 0.00045 34.1 2.0 29 9-40 218-246 (420)
254 3bw1_A SMX4 protein, U6 snRNA- 37.5 51 0.0017 23.9 4.8 33 210-242 21-53 (96)
255 3zrp_A Serine-pyruvate aminotr 37.3 18 0.0006 32.7 2.8 31 9-41 176-206 (384)
256 1ulr_A Putative acylphosphatas 37.1 35 0.0012 24.4 3.8 32 86-117 41-72 (88)
257 4emk_C U6 snRNA-associated SM- 37.1 66 0.0023 24.2 5.5 33 210-242 34-66 (113)
258 1ljo_A Archaeal SM-like protei 36.9 73 0.0025 21.8 5.4 33 210-242 16-49 (77)
259 1bs0_A Protein (8-amino-7-oxon 36.7 3.8 0.00013 37.5 -1.9 58 9-72 223-282 (384)
260 3ffr_A Phosphoserine aminotran 36.7 23 0.00077 31.6 3.4 32 7-40 175-207 (362)
261 4emg_A Probable U6 snRNA-assoc 36.6 64 0.0022 23.3 5.2 34 209-242 19-52 (93)
262 4emk_A U6 snRNA-associated SM- 36.6 64 0.0022 23.4 5.1 33 210-242 31-63 (94)
263 4eb5_A Probable cysteine desul 35.5 13 0.00044 33.6 1.5 27 11-40 188-214 (382)
264 1i8f_A Putative snRNP SM-like 35.4 54 0.0018 22.9 4.5 33 210-242 22-54 (81)
265 1rv3_A Serine hydroxymethyltra 35.0 29 0.00098 33.1 3.9 31 6-40 241-271 (483)
266 1j32_A Aspartate aminotransfer 34.6 3.5 0.00012 37.8 -2.6 58 11-71 226-283 (388)
267 1m32_A 2-aminoethylphosphonate 34.5 21 0.00073 31.8 2.8 30 10-41 181-210 (366)
268 3k6e_A CBS domain protein; str 34.1 24 0.0008 27.9 2.7 23 305-327 45-67 (156)
269 3vax_A Putative uncharacterize 34.1 19 0.00064 32.8 2.4 15 13-27 211-225 (400)
270 2nyi_A Unknown protein; protei 33.5 94 0.0032 25.5 6.5 63 45-108 94-162 (195)
271 3dr4_A Putative perosamine syn 33.5 8.2 0.00028 35.4 -0.2 27 13-42 195-223 (391)
272 1b34_B Protein (small nuclear 33.3 78 0.0027 23.9 5.4 34 209-242 39-72 (118)
273 3nra_A Aspartate aminotransfer 33.0 5 0.00017 36.9 -1.8 58 11-71 242-299 (407)
274 2bkw_A Alanine-glyoxylate amin 32.9 23 0.0008 31.9 2.8 30 10-41 189-218 (385)
275 3k6e_A CBS domain protein; str 32.0 23 0.00079 27.9 2.3 17 311-327 118-134 (156)
276 2okj_A Glutamate decarboxylase 32.0 11 0.00037 36.3 0.3 28 12-41 303-330 (504)
277 3pgw_B SM B; protein-RNA compl 32.0 56 0.0019 28.0 4.7 33 210-242 15-47 (231)
278 3p96_A Phosphoserine phosphata 31.9 90 0.0031 28.8 6.8 63 45-108 13-77 (415)
279 1b34_A Protein (small nuclear 31.7 1.1E+02 0.0038 23.1 6.1 61 210-272 13-73 (119)
280 3b8x_A WBDK, pyridoxamine 5-ph 31.5 6.3 0.00021 36.2 -1.4 35 7-41 171-206 (390)
281 1kmj_A Selenocysteine lyase; p 31.4 19 0.00066 32.7 2.0 28 10-40 214-241 (406)
282 3gbx_A Serine hydroxymethyltra 31.4 35 0.0012 31.2 3.8 29 7-39 218-246 (420)
283 3nqr_A Magnesium and cobalt ef 31.2 25 0.00084 26.3 2.3 21 307-327 98-118 (127)
284 3h7f_A Serine hydroxymethyltra 31.2 32 0.0011 32.2 3.5 31 6-40 233-263 (447)
285 4emh_A Probable U6 snRNA-assoc 31.0 97 0.0033 22.9 5.5 33 210-242 27-59 (105)
286 3mtj_A Homoserine dehydrogenas 30.8 75 0.0026 30.1 6.0 70 45-114 360-432 (444)
287 1w2i_A Acylphosphatase; hydrol 30.7 33 0.0011 24.7 2.7 33 85-117 42-74 (91)
288 3ruy_A Ornithine aminotransfer 30.5 14 0.00047 33.8 0.7 59 10-73 241-299 (392)
289 3b1d_A Betac-S lyase; HET: PLP 36.4 11 0.00037 34.6 0.0 59 11-71 227-286 (392)
290 3fdb_A Beta C-S lyase, putativ 30.2 4.2 0.00014 37.0 -2.9 88 11-110 212-300 (377)
291 3lfr_A Putative metal ION tran 30.1 26 0.00089 26.6 2.3 22 307-328 99-120 (136)
292 3e9k_A Kynureninase; kynurenin 30.0 23 0.00078 33.3 2.3 27 10-36 264-290 (465)
293 3gby_A Uncharacterized protein 29.8 27 0.00093 26.0 2.3 21 307-327 98-118 (128)
294 3cai_A Possible aminotransfera 29.8 21 0.00073 32.6 2.0 29 10-41 215-243 (406)
295 1eg5_A Aminotransferase; PLP-d 29.7 33 0.0011 30.8 3.2 29 10-41 191-219 (384)
296 3hf7_A Uncharacterized CBS-dom 29.4 27 0.00093 26.3 2.3 21 307-327 99-119 (130)
297 3i8n_A Uncharacterized protein 29.0 28 0.00096 26.1 2.3 21 307-327 101-121 (130)
298 1p0z_A Sensor kinase CITA; tra 28.8 32 0.0011 26.2 2.5 18 311-328 106-123 (131)
299 1n9r_A SMF, small nuclear ribo 28.6 94 0.0032 22.4 4.9 34 209-242 31-65 (93)
300 1u8s_A Glycine cleavage system 28.5 1.6E+02 0.0054 23.8 7.1 65 45-109 94-166 (192)
301 3jtf_A Magnesium and cobalt ef 28.3 28 0.00095 26.1 2.1 21 307-327 98-118 (129)
302 3get_A Histidinol-phosphate am 28.0 9.5 0.00033 34.5 -0.8 82 11-108 216-297 (365)
303 3dzz_A Putative pyridoxal 5'-p 28.0 5.2 0.00018 36.5 -2.7 87 13-111 223-313 (391)
304 3ly1_A Putative histidinol-pho 27.4 11 0.00037 33.9 -0.6 81 12-108 203-283 (354)
305 1urr_A CG18505 protein; acylph 27.4 51 0.0017 24.2 3.3 60 55-117 22-82 (102)
306 3ecd_A Serine hydroxymethyltra 27.4 38 0.0013 30.9 3.3 32 7-42 221-252 (425)
307 3ftb_A Histidinol-phosphate am 27.3 27 0.00093 31.2 2.2 87 11-112 204-290 (361)
308 2eqj_A Metal-response element- 27.2 1.5E+02 0.005 20.0 6.5 39 206-244 14-52 (66)
309 3fvs_A Kynurenine--oxoglutarat 27.2 6.7 0.00023 36.3 -2.0 59 11-72 236-294 (422)
310 3mgj_A Uncharacterized protein 26.7 1.2E+02 0.0042 22.9 5.3 41 69-109 31-72 (118)
311 1fg7_A Histidinol phosphate am 26.6 13 0.00043 33.8 -0.3 86 11-111 203-289 (356)
312 4dah_A Sporulation kinase D; a 26.6 78 0.0027 25.8 4.9 31 311-352 130-160 (217)
313 3kpb_A Uncharacterized protein 26.6 34 0.0012 25.0 2.3 21 307-327 92-112 (122)
314 1xi9_A Putative transaminase; 26.3 8.1 0.00028 35.7 -1.7 58 11-71 233-296 (406)
315 2z61_A Probable aspartate amin 26.3 11 0.00037 34.2 -0.8 59 11-72 211-269 (370)
316 1c4k_A Protein (ornithine deca 25.4 31 0.0011 35.1 2.4 32 7-40 333-371 (730)
317 3oi8_A Uncharacterized protein 25.3 34 0.0012 26.6 2.2 21 307-327 132-152 (156)
318 2m0o_A PHD finger protein 1; t 25.3 1.1E+02 0.0039 21.1 4.4 35 210-244 31-65 (79)
319 3lv9_A Putative transporter; C 25.3 35 0.0012 26.2 2.2 21 307-327 117-137 (148)
320 3ghd_A A cystathionine beta-sy 25.2 46 0.0016 22.3 2.6 21 307-328 22-42 (70)
321 3oco_A Hemolysin-like protein 25.2 33 0.0011 26.6 2.1 21 307-327 115-135 (153)
322 1wyu_B Glycine dehydrogenase s 25.1 28 0.00095 33.0 1.9 36 6-41 250-288 (474)
323 3lqn_A CBS domain protein; csg 24.7 37 0.0013 26.0 2.3 17 311-327 119-135 (150)
324 3syj_A Adhesion and penetratio 24.7 65 0.0022 33.6 4.5 61 188-252 58-133 (1011)
325 3a9z_A Selenocysteine lyase; P 24.7 24 0.00083 32.6 1.3 28 10-41 235-262 (432)
326 2gv1_A Probable acylphosphatas 24.6 63 0.0022 23.2 3.4 33 85-117 42-75 (92)
327 3ffh_A Histidinol-phosphate am 24.6 17 0.00059 32.7 0.3 86 10-111 213-298 (363)
328 2l1t_A Uncharacterized protein 24.5 2.2E+02 0.0075 21.2 6.8 52 211-269 20-71 (109)
329 2ch1_A 3-hydroxykynurenine tra 24.5 34 0.0012 31.0 2.3 29 10-40 193-221 (396)
330 2h9z_A Hypothetical protein HP 24.4 1.7E+02 0.006 20.5 5.7 67 46-114 17-85 (86)
331 1o4s_A Aspartate aminotransfer 24.3 13 0.00046 33.9 -0.5 58 11-71 235-292 (389)
332 2dkj_A Serine hydroxymethyltra 24.3 46 0.0016 30.2 3.2 27 13-42 217-243 (407)
333 2nyc_A Nuclear protein SNF4; b 24.0 40 0.0014 25.4 2.3 21 307-327 113-133 (144)
334 2bjd_A Acylphosphatase; hypert 23.9 56 0.0019 24.0 3.0 33 85-117 52-84 (101)
335 3kxr_A Magnesium transporter, 23.6 39 0.0013 28.1 2.3 22 307-328 146-167 (205)
336 2z9v_A Aspartate aminotransfer 23.5 39 0.0013 30.5 2.5 30 10-41 184-213 (392)
337 3kax_A Aminotransferase, class 23.5 7.9 0.00027 35.2 -2.3 88 12-111 220-309 (383)
338 2fhm_A Probable acylphosphatas 23.2 76 0.0026 22.6 3.5 33 85-117 40-72 (91)
339 2ef7_A Hypothetical protein ST 23.2 41 0.0014 25.0 2.3 21 307-327 97-117 (133)
340 2x5d_A Probable aminotransfera 23.1 7.5 0.00026 36.0 -2.6 58 11-71 234-291 (412)
341 3vp6_A Glutamate decarboxylase 23.1 19 0.00066 34.7 0.3 29 11-41 305-333 (511)
342 3trg_A Acylphosphatase; fatty 23.0 55 0.0019 23.9 2.7 33 85-117 50-82 (98)
343 1gd9_A Aspartate aminotransfer 22.8 9.8 0.00033 34.8 -1.8 58 11-71 222-279 (389)
344 1iug_A Putative aspartate amin 22.8 45 0.0015 29.4 2.8 30 10-41 173-202 (352)
345 3n0l_A Serine hydroxymethyltra 22.4 51 0.0017 30.0 3.1 29 12-43 217-245 (417)
346 2rih_A Conserved protein with 22.4 44 0.0015 25.3 2.3 22 307-328 100-121 (141)
347 3isl_A Purine catabolism prote 22.3 42 0.0014 30.5 2.5 30 9-40 185-214 (416)
348 2lxf_A Uncharacterized protein 22.3 55 0.0019 25.0 2.7 60 55-117 45-104 (121)
349 2uv4_A 5'-AMP-activated protei 22.1 51 0.0017 25.3 2.6 22 307-328 51-72 (152)
350 2vh7_A Acylphosphatase-1; hydr 22.0 67 0.0023 23.4 3.1 59 55-116 19-78 (99)
351 1m5q_A SMAP3, small nuclear ri 22.0 1.7E+02 0.0057 22.6 5.5 57 210-272 11-67 (130)
352 3lhh_A CBS domain protein; str 21.7 45 0.0015 26.5 2.3 14 312-325 141-154 (172)
353 3sl7_A CBS domain-containing p 21.7 45 0.0015 26.3 2.3 14 312-325 133-146 (180)
354 3lqn_A CBS domain protein; csg 21.6 52 0.0018 25.1 2.6 22 307-328 47-68 (150)
355 3fio_A A cystathionine beta-sy 21.4 60 0.0021 20.9 2.6 22 306-328 21-42 (70)
356 3ou5_A Serine hydroxymethyltra 21.4 55 0.0019 31.4 3.0 35 2-40 247-281 (490)
357 2huf_A Alanine glyoxylate amin 21.4 43 0.0015 30.3 2.3 29 10-40 194-222 (393)
358 3p1t_A Putative histidinol-pho 21.4 10 0.00035 33.7 -1.9 30 11-41 187-216 (337)
359 2fwk_A U6 snRNA-associated SM- 20.9 79 0.0027 24.0 3.4 32 210-241 39-70 (121)
360 2jhe_A Transcription regulator 20.8 2.6E+02 0.0088 21.7 6.9 66 47-116 3-69 (190)
361 1gtd_A MTH169; synthetase, FGA 20.8 2.2E+02 0.0076 19.9 7.4 64 47-116 5-77 (85)
362 3nnk_A Ureidoglycine-glyoxylat 20.8 52 0.0018 29.9 2.8 31 9-41 187-217 (411)
363 3ctu_A CBS domain protein; str 20.6 56 0.0019 25.1 2.6 24 305-328 45-68 (156)
364 3h09_A IGA1 protease, immunogl 20.5 58 0.002 33.9 3.1 47 304-350 258-311 (989)
365 2hox_A ALLIIN lyase 1; cystein 20.4 11 0.00038 35.4 -2.0 60 10-71 239-298 (427)
366 2o16_A Acetoin utilization pro 20.4 56 0.0019 25.4 2.6 22 307-328 35-56 (160)
367 3ocm_A Putative membrane prote 20.4 45 0.0016 26.7 2.0 21 307-327 129-149 (173)
368 3ezs_A Aminotransferase ASPB; 20.3 19 0.00065 32.5 -0.4 59 10-71 219-277 (376)
No 1
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=6.6e-38 Score=282.50 Aligned_cols=204 Identities=36% Similarity=0.590 Sum_probs=163.3
Q ss_pred hHHHhhhcCCCeeEEEEeeeeecC----------Cccc-------ccccceEEEEEEeCC-CEEEecccccCCCCeEEEE
Q 018198 154 ETIRIFEENISSVVWIGNLGIRED----------QSET-------EFLRGSGAGFLWDQD-GHIVTNYHVICGASTVKVS 215 (359)
Q Consensus 154 ~~~~~~~~~~~svV~I~~~~~~~~----------~~~~-------~~~~~~GsGfii~~~-g~vlT~~Hvv~~~~~~~v~ 215 (359)
++.++++++.||||.|.+...... +++. ....+.||||+|+++ ||||||+||+.+...+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V~ 93 (245)
T 3sti_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (245)
T ss_dssp BSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEEEE
T ss_pred CHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEEE
Confidence 578899999999999998764431 1111 112578999999998 9999999999999999999
Q ss_pred ecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecc-cCCccc
Q 018198 216 FSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDRE-IPGRLI 294 (359)
Q Consensus 216 ~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~-~~~~~~ 294 (359)
+.+++.++++++..|+.+||||||++.+ ..+++++|+++..++.|++|+++|||++...+++.|+|+...+. ......
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~~~~~~~~ 172 (245)
T 3sti_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGL 172 (245)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSCSSCCTTC
T ss_pred ECCCCEEEEEEEEecCCCCEEEEEeccC-CCCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeecccccCCCCc
Confidence 9999999999999999999999999764 35889999877788999999999999999999999999998776 333344
Q ss_pred ccEEEEcccCCCCCccceeecCCCeEEEEEeeecC--CCcceeEEEEehHHHHHHHHHHHhcCccc
Q 018198 295 QGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS--GAFSGIGFALPIDTVRGIVDQLVKFSRYC 358 (359)
Q Consensus 295 ~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~--~~~~~~~~aip~~~i~~~l~~l~~~g~v~ 358 (359)
..++++|+.+++|+|||||||.+|+||||+++... ++..+++||||++.+++++++|+++|++.
T Consensus 173 ~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~ 238 (245)
T 3sti_A 173 ENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIL 238 (245)
T ss_dssp SSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_pred cCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999873 34568999999999999999999998764
No 2
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=4.9e-37 Score=291.47 Aligned_cols=216 Identities=63% Similarity=0.987 Sum_probs=188.8
Q ss_pred CCCCCchhhhhHHHhhhcCCCeeEEEEeeeeecCCccc---ccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCc
Q 018198 144 QPCKLQMDELETIRIFEENISSVVWIGNLGIREDQSET---EFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQS 220 (359)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~---~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~ 220 (359)
++....+.+.+..++++++.+|||.|.......+.+.. ..+.+.||||+|+++||||||+||+.+...+.|.+.+++
T Consensus 8 ~~~~~~~~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~ 87 (348)
T 3qo6_A 8 TPKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQT 87 (348)
T ss_dssp -CCCCCHHHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSC
T ss_pred CccccCcchhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEECCCC
Confidence 45567888999999999999999999998776665432 234678999999999999999999999999999999999
Q ss_pred EEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC----Cccccc
Q 018198 221 TFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP----GRLIQG 296 (359)
Q Consensus 221 ~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~----~~~~~~ 296 (359)
.++++++..|+.+||||||++.+...+++++|+++..+..|++++++|||.+...+++.|.|+...+... +.....
T Consensus 88 ~~~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~ 167 (348)
T 3qo6_A 88 TFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQD 167 (348)
T ss_dssp EEEEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEEE
T ss_pred EEEEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCcccC
Confidence 9999999999999999999997654688899987788899999999999999888999999998876543 223346
Q ss_pred EEEEcccCCCCCccceeecCCCeEEEEEeeecC--CCcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 297 VIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS--GAFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 297 ~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~--~~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
++++++.+++|+|||||+|.+|+||||+++... +...+++|+||++.+++++++++++|++.|
T Consensus 168 ~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~ 232 (348)
T 3qo6_A 168 VIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTR 232 (348)
T ss_dssp EEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCC
T ss_pred EEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceee
Confidence 799999999999999999999999999999873 235789999999999999999999999875
No 3
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=7.7e-37 Score=275.19 Aligned_cols=206 Identities=35% Similarity=0.495 Sum_probs=176.8
Q ss_pred hhHHHhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCC
Q 018198 153 LETIRIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQV 232 (359)
Q Consensus 153 ~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~ 232 (359)
.++.++++++.+|||+|........+.......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++..|+.
T Consensus 20 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~~g~~~~a~vv~~d~~ 99 (237)
T 3lgi_A 20 ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSL 99 (237)
T ss_dssp CBCHHHHHHHGGGEEEEEEECCTTTCTTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEEETT
T ss_pred cCHHHHHHHhCCcEEEEEEEecccCcccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeCCCCEEEEEEEEEcCC
Confidence 35678899999999999988754433222334578999999998999999999999999999999999999999999999
Q ss_pred CCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccCC-cccccEEEEcccCCCCCccc
Q 018198 233 NDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIPG-RLIQGVIQIDASVNLGNSGG 311 (359)
Q Consensus 233 ~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~~-~~~~~~i~~~~~~~~G~SGg 311 (359)
+|||||+++.+. .+++++|+++..+..|+.++++|||.+....++.|.|+...+.... .....++++++.+++|+|||
T Consensus 100 ~DlAll~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~~~~~~~i~~d~~i~~G~SGG 178 (237)
T 3lgi_A 100 TDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGG 178 (237)
T ss_dssp TTEEEEECCCSS-CCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCTTSCSCCEEECSCCCTTCTTC
T ss_pred CCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccCCCcCCEEEEcCccCCCCchH
Confidence 999999998754 4788899877788999999999999998889999999988765432 23346799999999999999
Q ss_pred eeecCCCeEEEEEeeecCC-----CcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 312 PLLDSSGSLIGVNTFITSG-----AFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 312 Pl~~~~G~viGi~~~~~~~-----~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
||||.+|+||||+++.... ...+++|+||++.+++++++|+++|++.+
T Consensus 179 Plv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~~ 231 (237)
T 3lgi_A 179 ALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 231 (237)
T ss_dssp EEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC
T ss_pred HeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999997632 34679999999999999999999999753
No 4
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=2.8e-37 Score=277.85 Aligned_cols=207 Identities=36% Similarity=0.595 Sum_probs=169.9
Q ss_pred hhHHHhhhcCCCeeEEEEeeeeecC-------------Cccc-----ccc-cceEEEEEEeCCCEEEecccccCCCCeEE
Q 018198 153 LETIRIFEENISSVVWIGNLGIRED-------------QSET-----EFL-RGSGAGFLWDQDGHIVTNYHVICGASTVK 213 (359)
Q Consensus 153 ~~~~~~~~~~~~svV~I~~~~~~~~-------------~~~~-----~~~-~~~GsGfii~~~g~vlT~~Hvv~~~~~~~ 213 (359)
.++.++++++.||||+|.+...... ++.. ... .+.||||+|+++||||||+||+.+..++.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~ 83 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNIT 83 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCE
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEE
Confidence 3578899999999999998754321 1110 112 57899999998899999999999999999
Q ss_pred EEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccCCc-
Q 018198 214 VSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIPGR- 292 (359)
Q Consensus 214 v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~~~- 292 (359)
|.+.+|+.++++++..|+.+||||||++.+...+++++|+++..++.|++++++|||.+...+++.|+|+...+.....
T Consensus 84 V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~ 163 (239)
T 1l1j_A 84 VTMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPD 163 (239)
T ss_dssp EECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTT
T ss_pred EEECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEeccccccccCC
Confidence 9999999999999999999999999998753458899998777789999999999999988889999999887653211
Q ss_pred ---ccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC-CCcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 293 ---LIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS-GAFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 293 ---~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~-~~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
.+..++++|+.+++|+|||||+|.+|+||||+++... +...+++|+||++.+++++++|+++|++.|
T Consensus 164 ~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~r 234 (239)
T 1l1j_A 164 GSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVEK 234 (239)
T ss_dssp SSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC------
T ss_pred CccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCcc
Confidence 1456899999999999999999999999999999874 234589999999999999999999999875
No 5
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=2.8e-36 Score=285.37 Aligned_cols=205 Identities=36% Similarity=0.586 Sum_probs=176.4
Q ss_pred hHHHhhhcCCCeeEEEEeeeeecC----------Cccc-------ccccceEEEEEEeCC-CEEEecccccCCCCeEEEE
Q 018198 154 ETIRIFEENISSVVWIGNLGIRED----------QSET-------EFLRGSGAGFLWDQD-GHIVTNYHVICGASTVKVS 215 (359)
Q Consensus 154 ~~~~~~~~~~~svV~I~~~~~~~~----------~~~~-------~~~~~~GsGfii~~~-g~vlT~~Hvv~~~~~~~v~ 215 (359)
++.++++++.||||.|.+...... +|+. ....+.||||+|+++ ||||||+||+.+...+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V~ 93 (345)
T 3stj_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (345)
T ss_dssp BSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEE
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEE
Confidence 578899999999999998764431 1111 112588999999987 9999999999999999999
Q ss_pred ecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecc-cCCccc
Q 018198 216 FSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDRE-IPGRLI 294 (359)
Q Consensus 216 ~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~-~~~~~~ 294 (359)
+.+++.++++++..|+.+||||||++.+ ..+++++++++..++.|++|+++|||++...+++.|+|+...+. .....+
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~~~~~~~~ 172 (345)
T 3stj_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGL 172 (345)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEECCSSSSSS
T ss_pred eCCCcEEEEEEEEEcCCCCEEEEEEccc-CCCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeecccccCCCCc
Confidence 9999999999999999999999999764 35889999888889999999999999999999999999999876 333344
Q ss_pred ccEEEEcccCCCCCccceeecCCCeEEEEEeeecC--CCcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 295 QGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS--GAFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 295 ~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~--~~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
..++++|+.+++|+|||||||.+|+||||+++... +...+++|+||++.+++++++|+++|++.|
T Consensus 173 ~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~ 239 (345)
T 3stj_A 173 ENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKR 239 (345)
T ss_dssp CCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCC
T ss_pred cCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccc
Confidence 67899999999999999999999999999999873 345689999999999999999999999875
No 6
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=2.5e-35 Score=287.49 Aligned_cols=206 Identities=35% Similarity=0.579 Sum_probs=179.7
Q ss_pred hhHHHhhhcCCCeeEEEEeeeeecC----------Cccc-------ccccceEEEEEEeCC-CEEEecccccCCCCeEEE
Q 018198 153 LETIRIFEENISSVVWIGNLGIRED----------QSET-------EFLRGSGAGFLWDQD-GHIVTNYHVICGASTVKV 214 (359)
Q Consensus 153 ~~~~~~~~~~~~svV~I~~~~~~~~----------~~~~-------~~~~~~GsGfii~~~-g~vlT~~Hvv~~~~~~~v 214 (359)
.++.++++++.||||.|.+...... +|+. ....+.||||+|+++ ||||||+||+.++.++.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~V 92 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEEE
Confidence 4688999999999999998765431 1110 123588999999987 999999999999999999
Q ss_pred EecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecc-cCCcc
Q 018198 215 SFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDRE-IPGRL 293 (359)
Q Consensus 215 ~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~-~~~~~ 293 (359)
.+.+++.+++++++.|+.+||||||++.+. .+++++|+++..++.|++|+++|||++...+++.|+|+...+. .....
T Consensus 93 ~~~dg~~~~a~vv~~d~~~DlAllkv~~~~-~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~~~~~ 171 (436)
T 4a8c_A 93 QLNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEG 171 (436)
T ss_pred EeCCCCEEEEEEEEEcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeecccccCCCC
Confidence 999999999999999999999999997643 5899999888899999999999999999999999999999876 33344
Q ss_pred cccEEEEcccCCCCCccceeecCCCeEEEEEeeecC--CCcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 294 IQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS--GAFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 294 ~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~--~~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
+.+++++|+.+++|+|||||||.+|+||||+++... +...+++|+||++.+++++++|+++|++.|
T Consensus 172 ~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r 239 (436)
T 4a8c_A 172 LENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKR 239 (436)
T ss_pred ccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhcccccc
Confidence 567899999999999999999999999999999873 345689999999999999999999999865
No 7
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=4.7e-35 Score=262.35 Aligned_cols=203 Identities=33% Similarity=0.480 Sum_probs=168.3
Q ss_pred CCCchhhhhHHHhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEE
Q 018198 146 CKLQMDELETIRIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQ 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~ 225 (359)
..++.....+.++++++.+|||+|....... +.......+.||||+|+++||||||+||+.+...+.|.+.+++.++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~sVV~I~~~~~~~-~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~~g~~~~a~ 102 (231)
T 3tjo_A 24 NSLRHKYNFIADVVEKIAPAVVHIELFRKLP-FSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAK 102 (231)
T ss_dssp TSHHHHSCHHHHHHHHHGGGEEEEEEEEECT-TSSCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECTTSCEEEEE
T ss_pred ccccchhhHHHHHHHHhcCcEEEEEEEeccc-cCCCccccceEEEEEEeCCCEEEEchhcccCCceEEEEcCCCCEEEEE
Confidence 3455566788899999999999999876421 111122346899999999899999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC----CcccccEEEEc
Q 018198 226 VVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP----GRLIQGVIQID 301 (359)
Q Consensus 226 v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~----~~~~~~~i~~~ 301 (359)
++..|+.+|||||+++.+. .++++.|+++..+..|++++++|||.+...+++.|.++...+... ......+++++
T Consensus 103 v~~~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d 181 (231)
T 3tjo_A 103 IKDVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTD 181 (231)
T ss_dssp EEEEETTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEES
T ss_pred EEEecCCCCEEEEEecCCC-CCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEc
Confidence 9999999999999999643 578888877778899999999999998888889999998866432 11223578999
Q ss_pred ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 302 ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 302 ~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
+.+++|+|||||||.+|+||||+++... .+++||||++.++++|+++.+
T Consensus 182 a~i~~G~SGGPLv~~~G~vVGI~s~~~~---~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 182 AIINYGNAGGPLVNLDGEVIGINTLKVT---AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp SCCCTTTTTSEEECTTSCEEEEEEEEEE---TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCcCCCCchhHeecCCCeEEEEEeEEec---CCeEEEEEHHHHHHHHHHHhh
Confidence 9999999999999999999999999763 568999999999999999876
No 8
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=1.1e-34 Score=272.28 Aligned_cols=206 Identities=35% Similarity=0.481 Sum_probs=175.7
Q ss_pred hhHHHhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCC
Q 018198 153 LETIRIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQV 232 (359)
Q Consensus 153 ~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~ 232 (359)
.++.++++++.+|||+|.+......+.......+.||||+|+++||||||+||+.+...+.|.+.+|+.++++++.+|+.
T Consensus 9 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~d~~ 88 (318)
T 1te0_A 9 ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSL 88 (318)
T ss_dssp CCCHHHHHHHGGGEEEEEEEEECSSSSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEEETT
T ss_pred ccHHHHHHhcCCcEEEEEeEeccCCcccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEeCCC
Confidence 35678899999999999998754332111223578999999998999999999999999999999999999999999999
Q ss_pred CCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC-CcccccEEEEcccCCCCCccc
Q 018198 233 NDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP-GRLIQGVIQIDASVNLGNSGG 311 (359)
Q Consensus 233 ~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~-~~~~~~~i~~~~~~~~G~SGg 311 (359)
+|||||+++.+ ..+++++|+++..+..|++|+++|||++....++.|+|+...+... ......++++++.+++|+|||
T Consensus 89 ~DlAllk~~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~i~~d~~~~~G~SGG 167 (318)
T 1te0_A 89 TDLAVLIIKAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGG 167 (318)
T ss_dssp TTEEEEECCCS-SCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCCTTCSCCSEEESSCCCTTTTTS
T ss_pred ceEEEEEEeCC-CCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccCCCCcCCEEEECCCCCCCCCcC
Confidence 99999999875 3578899987678899999999999999888999999998876532 123346799999999999999
Q ss_pred eeecCCCeEEEEEeeecCC-----CcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 312 PLLDSSGSLIGVNTFITSG-----AFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 312 Pl~~~~G~viGi~~~~~~~-----~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
||||.+|+||||+++.... ...+++|+||++.+++++++|+++|++.|
T Consensus 168 Pl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~ 220 (318)
T 1te0_A 168 ALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 220 (318)
T ss_dssp EEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCC
T ss_pred ceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCccc
Confidence 9999999999999998742 34678999999999999999999998764
No 9
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.2e-34 Score=283.35 Aligned_cols=204 Identities=36% Similarity=0.606 Sum_probs=168.3
Q ss_pred hHHHhhhcCCCeeEEEEeeeeecC----------------Cccc---------ccccceEEEEEEeCC-CEEEecccccC
Q 018198 154 ETIRIFEENISSVVWIGNLGIRED----------------QSET---------EFLRGSGAGFLWDQD-GHIVTNYHVIC 207 (359)
Q Consensus 154 ~~~~~~~~~~~svV~I~~~~~~~~----------------~~~~---------~~~~~~GsGfii~~~-g~vlT~~Hvv~ 207 (359)
++.++++++.||||.|.+...... +++. ....+.||||+|+++ ||||||+||+.
T Consensus 20 ~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv~ 99 (451)
T 3pv2_A 20 SMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVIR 99 (451)
T ss_dssp CSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHHT
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHhC
Confidence 578899999999999998753211 1110 123478999999975 99999999999
Q ss_pred CCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCC-----CceeEeEE
Q 018198 208 GASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWS-----FTCTTGVI 282 (359)
Q Consensus 208 ~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~-----~~~~~G~v 282 (359)
++.++.|.+.|++.++++++..|+.+||||||++. ..++++.|+++..++.|++|+++|||++.. .+++.|+|
T Consensus 100 ~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~--~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~vt~Giv 177 (451)
T 3pv2_A 100 NASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA--KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGIV 177 (451)
T ss_dssp TEEEEEEECTTSCEEECEEEEEETTTTEEEEECCC--SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCEEEEEEE
T ss_pred CCCEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC--cCCceeEecCcccCCCCCEEEEEECCCCccccccCCceeEEEE
Confidence 99999999999999999999999999999999976 358889998878899999999999999987 89999999
Q ss_pred eeeecc-cCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC--CCcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 283 SALDRE-IPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS--GAFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 283 s~~~~~-~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~--~~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
+...+. .....+..++++|+.+++|+|||||||.+|+||||+++... +...+++||||++.+++++++|+++|++.|
T Consensus 178 s~~~r~~~~~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r 257 (451)
T 3pv2_A 178 SALKRSDLNIEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFGSIHR 257 (451)
T ss_dssp EEEC----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHSSCCC
T ss_pred eeccccccCCCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcCCccc
Confidence 999776 33334457899999999999999999999999999998863 345689999999999999999999999875
No 10
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-33 Score=278.65 Aligned_cols=194 Identities=27% Similarity=0.410 Sum_probs=160.4
Q ss_pred CCCeeEEEEeeeeecCCccc----ccccceEEEEEEeCCCEEEecccccCCCCeEEEEec-CCcEEEEEEEEEcCCCCEE
Q 018198 162 NISSVVWIGNLGIREDQSET----EFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFS-DQSTFYAQVVGHDQVNDLA 236 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~----~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~-~g~~~~~~v~~~d~~~DlA 236 (359)
..+|||+|.+.....++..+ ....+.||||+|+ +||||||+|||.++..+.|.+. ||+.++|++++.|+..|||
T Consensus 46 ~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DLA 124 (539)
T 4fln_A 46 FLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIA 124 (539)
T ss_dssp HHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTEE
T ss_pred cCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCEE
Confidence 34899999998765444322 3346889999998 6899999999999999999984 8999999999999999999
Q ss_pred EEEEcCCCC--CccceEecCCCCCCCCCEEEEEecCCCCCC-ceeEeEEeeeecccC--CcccccEEEEcccCCCCCccc
Q 018198 237 VLHIDAPNH--ELRPIHVSVSADLRVGKKIYAIGHPLGWSF-TCTTGVISALDREIP--GRLIQGVIQIDASVNLGNSGG 311 (359)
Q Consensus 237 ll~v~~~~~--~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~-~~~~G~vs~~~~~~~--~~~~~~~i~~~~~~~~G~SGg 311 (359)
|||++.... ..+++.++ ..++.|++|+++|||++... +++.|+|+++.+... +.....+||+|+++++|+|||
T Consensus 125 vLkv~~~~~~~~~~pl~~g--~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSGG 202 (539)
T 4fln_A 125 LLSVESEDFWKGAEPLRLG--HLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGG 202 (539)
T ss_dssp EEEECCSSSSTTCCCCCBC--CCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTTS
T ss_pred EEEEeCCcCCcCCceeecC--CcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCcceeEEEEEeEecCCCccc
Confidence 999987542 23455554 45678999999999998754 899999999987654 223335699999999999999
Q ss_pred eeecCCCeEEEEEeeecC-CCcceeEEEEehHHHHHHHHHHHhcCccc
Q 018198 312 PLLDSSGSLIGVNTFITS-GAFSGIGFALPIDTVRGIVDQLVKFSRYC 358 (359)
Q Consensus 312 Pl~~~~G~viGi~~~~~~-~~~~~~~~aip~~~i~~~l~~l~~~g~v~ 358 (359)
||||.+|+||||+++... ....+++||||++.+++++++|+++|++.
T Consensus 203 PLvn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G~~~ 250 (539)
T 4fln_A 203 PAFNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGKYT 250 (539)
T ss_dssp EEECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTTSCC
T ss_pred hhccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcCeEE
Confidence 999999999999998763 34578999999999999999999999975
No 11
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1.2e-33 Score=276.07 Aligned_cols=205 Identities=37% Similarity=0.595 Sum_probs=173.7
Q ss_pred hHHHhhhcCCCeeEEEEeeeeec-----------CCcccc-----------------------------cccceEEEEEE
Q 018198 154 ETIRIFEENISSVVWIGNLGIRE-----------DQSETE-----------------------------FLRGSGAGFLW 193 (359)
Q Consensus 154 ~~~~~~~~~~~svV~I~~~~~~~-----------~~~~~~-----------------------------~~~~~GsGfii 193 (359)
++.++++++.||||.|.+..... .+|+.. ...+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 57889999999999999875421 111100 11367999999
Q ss_pred eCC-CEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCC
Q 018198 194 DQD-GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLG 272 (359)
Q Consensus 194 ~~~-g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~ 272 (359)
+++ ||||||+||+.++..+.|++.||+.+++++++.|+.+||||||++.+ ..+++++|+++..+++|++|+++|||++
T Consensus 94 ~~~~g~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~P~g 172 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNP-KNLTAIKMADSDALRVGDYTVAIGNPFG 172 (448)
T ss_dssp ETTTTEEEEEHHHHTTEEEEEEEETTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTCEEEEEECTTS
T ss_pred ECCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEEecccccCCCCCEEEEEECCCC
Confidence 987 99999999999999999999999999999999999999999999864 3588999988888999999999999999
Q ss_pred CCCceeEeEEeeeecc-cCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC--CCcceeEEEEehHHHHHHHH
Q 018198 273 WSFTCTTGVISALDRE-IPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS--GAFSGIGFALPIDTVRGIVD 349 (359)
Q Consensus 273 ~~~~~~~G~vs~~~~~-~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~--~~~~~~~~aip~~~i~~~l~ 349 (359)
...+++.|+|+...+. .....+.+++++|+.+++|+|||||||.+|+||||+++... +...+++|+||++.++++++
T Consensus 173 ~~~tvt~Givs~~~r~~~~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~ 252 (448)
T 1ky9_A 173 LGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTS 252 (448)
T ss_dssp SSCEEEEEEEEEESSCC-----CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHHHHH
T ss_pred CCCeEEeEEEeeccccccCCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchhhHH
Confidence 9899999999999776 22233457899999999999999999999999999998763 34468999999999999999
Q ss_pred HHHhcCcccC
Q 018198 350 QLVKFSRYCN 359 (359)
Q Consensus 350 ~l~~~g~v~~ 359 (359)
+|+++|++.|
T Consensus 253 ~l~~~g~v~~ 262 (448)
T 1ky9_A 253 QMVEYGQVKR 262 (448)
T ss_dssp HHHHHSSCCB
T ss_pred HHhhhcccce
Confidence 9999998764
No 12
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=5.2e-33 Score=262.28 Aligned_cols=203 Identities=33% Similarity=0.480 Sum_probs=163.8
Q ss_pred CCCchhhhhHHHhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEE
Q 018198 146 CKLQMDELETIRIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQ 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~ 225 (359)
.........+.++++++.||||+|...... .+.......+.||||+|+++||||||+||+.+...+.|.+.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~sVV~I~~~~~~-~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~~g~~~~a~ 85 (332)
T 3num_A 7 NSLRHKYNFIADVVEKIAPAVVHIELFRKL-PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAK 85 (332)
T ss_dssp SSHHHHHCHHHHHHHHHGGGEEEEEEEEEC-TTSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEETTSCEEEEE
T ss_pred CccccccchHHHHHHHhcCcEEEEEEEecc-ccCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEECCCCEEEEE
Confidence 344556678899999999999999986532 1222223457899999999899999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC----CcccccEEEEc
Q 018198 226 VVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP----GRLIQGVIQID 301 (359)
Q Consensus 226 v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~----~~~~~~~i~~~ 301 (359)
++..|+.+|||||+++.+. .++++.++++..+..|++++++|||.+...+++.|.++...+... ......+++++
T Consensus 86 ~~~~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d 164 (332)
T 3num_A 86 IKDVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTD 164 (332)
T ss_dssp EEEEETTTTEEEEEECCSS-CCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEES
T ss_pred EEEecCCCCeEEEEEcCCC-CCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEEE
Confidence 9999999999999999753 578888887788899999999999999888999999998866432 11223678999
Q ss_pred ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 302 ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 302 ~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
+.+++|+|||||||.+|+||||+++... .+++|+||++.++++++++++
T Consensus 165 ~~i~~G~SGGPlv~~~G~vvGI~s~~~~---~g~~~aip~~~i~~~l~~~~~ 213 (332)
T 3num_A 165 AIINYGNAGGPLVNLDGEVIGINTLKVT---AGISFAIPSDKIKKFLTESHD 213 (332)
T ss_dssp SCCCTTTTTSEEEETTSCEEEEEEEEEE---TTEEEEEEHHHHHHHHHHHCC
T ss_pred CCcCCCCcHHHhhCCCCcEEEEEeeEec---ccceEEECHHHHHHHHHHHhh
Confidence 9999999999999999999999999764 568999999999999999853
No 13
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=3.6e-33 Score=262.63 Aligned_cols=197 Identities=38% Similarity=0.604 Sum_probs=167.9
Q ss_pred hHHHhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC---------eEEEEecCCcEEEE
Q 018198 154 ETIRIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS---------TVKVSFSDQSTFYA 224 (359)
Q Consensus 154 ~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~---------~~~v~~~~g~~~~~ 224 (359)
++.++++++.||||+|...... ..+.||||+|+++||||||+||+.+.. .+.|.+.+++.+++
T Consensus 7 ~~~~~~~~~~~svV~I~~~~~~--------~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~~~~a 78 (324)
T 1y8t_A 7 SVEQVAAKVVPSVVMLETDLGR--------QSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPF 78 (324)
T ss_dssp CHHHHHHHHGGGEEEEEEEC------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCCEECE
T ss_pred cHHHHHHHhcCcEEEEEEEccC--------CCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCCEEEE
Confidence 5778999999999999875431 235899999998789999999998765 79999999999999
Q ss_pred EEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC-----C--cccccE
Q 018198 225 QVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP-----G--RLIQGV 297 (359)
Q Consensus 225 ~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~-----~--~~~~~~ 297 (359)
+++.+|+.+|||||+++.+ ..+++++|+++..+..|++++++|||.+...+++.|+|+...+... + .....+
T Consensus 79 ~vv~~d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~~~~~ 157 (324)
T 1y8t_A 79 TVVGADPTSDIAVVRVQGV-SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDA 157 (324)
T ss_dssp EEEECCTTTTEEEEEECSC-CSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CCCEEE
T ss_pred EEEEeCCCCCEEEEEECCC-CCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccccCCE
Confidence 9999999999999999975 3588999987777899999999999999888889999998865432 1 123468
Q ss_pred EEEcccCCCCCccceeecCCCeEEEEEeeecCC---------CcceeEEEEehHHHHHHHHHHHhcCcccC
Q 018198 298 IQIDASVNLGNSGGPLLDSSGSLIGVNTFITSG---------AFSGIGFALPIDTVRGIVDQLVKFSRYCN 359 (359)
Q Consensus 298 i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~---------~~~~~~~aip~~~i~~~l~~l~~~g~v~~ 359 (359)
+++++.+|+|+|||||+|.+|+||||+++.... ...+++|+||++.+++++++|+++|++.+
T Consensus 158 i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~ 228 (324)
T 1y8t_A 158 IQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASH 228 (324)
T ss_dssp EEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCC
T ss_pred EEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccc
Confidence 999999999999999999999999999998632 23578999999999999999999998754
No 14
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=1.2e-33 Score=265.66 Aligned_cols=199 Identities=34% Similarity=0.504 Sum_probs=164.2
Q ss_pred hhhhHHHhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEc
Q 018198 151 DELETIRIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHD 230 (359)
Q Consensus 151 ~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d 230 (359)
....+.++++++.+|||+|...... .+.+.....+.||||+|+++||||||+||+.+...+.|++.+|+.++++++.+|
T Consensus 13 ~~~~~~~~~~~~~~sVV~I~~~~~~-~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~d 91 (325)
T 1lcy_A 13 QYNFIADVVEKTAPAVVYIEILDRH-PFLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVD 91 (325)
T ss_dssp HSCHHHHHHHHHGGGEEEEEEEEEE-TTTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEEE
T ss_pred chhHHHHHHHHhCCcEEEEEEEecC-ccCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEEC
Confidence 3456789999999999999875432 111111234689999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC--C--cccccEEEEcccCCC
Q 018198 231 QVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP--G--RLIQGVIQIDASVNL 306 (359)
Q Consensus 231 ~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~--~--~~~~~~i~~~~~~~~ 306 (359)
+.+||||||++.+. .+++++|+++..+..|++++++|||.+...+++.|+|+...+... + .....++++++.+++
T Consensus 92 ~~~DlAllkl~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~~ 170 (325)
T 1lcy_A 92 PVADIATLRIQTKE-PLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAIDF 170 (325)
T ss_dssp TTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESSCCST
T ss_pred CCCCEEEEEEcCCC-CCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcCCCCC
Confidence 99999999998743 578889987667899999999999999888999999998866421 1 123467999999999
Q ss_pred CCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 307 GNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
|+|||||||.+|+||||+++... .+++|+||++.++++++++++.
T Consensus 171 G~SGGPl~~~~G~vVGI~s~~~~---~g~~~aip~~~i~~~l~~~~~~ 215 (325)
T 1lcy_A 171 GNAGGPLVNLDGEVIGVNTMKVT---AGISFAIPSDRLREFLHRGEKK 215 (325)
T ss_dssp TTTTSEEEETTSCEEEEEEEEEE---TTEEEEEEHHHHHHHTCC----
T ss_pred CCccccEECCCCEEEEEEeEeec---CCeeEEEEHHHHHHHHHHhhhc
Confidence 99999999999999999999863 4689999999999999998765
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=100.00 E-value=1.1e-31 Score=241.52 Aligned_cols=192 Identities=29% Similarity=0.390 Sum_probs=158.9
Q ss_pred HHHhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCC
Q 018198 155 TIRIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVND 234 (359)
Q Consensus 155 ~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~D 234 (359)
..++++++.+|||+|........ ..+.||||+|+ +||||||+||+.+...+.|.+.+ ..+.++++..|+.+|
T Consensus 33 ~~~~~~~~~~svV~I~~~~~~~~------~~~~GsG~iI~-~~~VlTaaH~v~~~~~~~V~~~~-~~~~~~~v~~~~~~D 104 (237)
T 3k6y_A 33 NNPVVAATEPSVVKIRSLAPRCQ------KVLEGTGFVIS-PDRVMTNAHVVAGSNNVTVYAGD-KPFEATVVSYDPSVD 104 (237)
T ss_dssp GCHHHHHHGGGEEEEEEEEGGGT------EEEEEEEEEEE-TTEEEECGGGTTTCSEEEEEETT-EEEECEEEEEETTTT
T ss_pred cHHHHHHhcCCEEEEEEEecCCC------cceeEEEEEEE-CCEEEECHHHcCCCceEEEEECC-cEEEEEEEEEcCCCC
Confidence 35688999999999998764321 24589999999 67999999999999999999988 488899999999999
Q ss_pred EEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC----C--c-ccccEEEEcccCCCC
Q 018198 235 LAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP----G--R-LIQGVIQIDASVNLG 307 (359)
Q Consensus 235 lAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~----~--~-~~~~~i~~~~~~~~G 307 (359)
|||||++.. .+++++|+ +..+..|+.++++|||.+.......|.++...+... . . ....++++++.+++|
T Consensus 105 iAll~l~~~--~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 181 (237)
T 3k6y_A 105 VAILAVPHL--PPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQG 181 (237)
T ss_dssp EEEEECTTC--CSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEESCCCTT
T ss_pred EEEEEeCCC--CCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecCccCCC
Confidence 999999843 47888887 677889999999999998888888887766543221 1 1 233578899999999
Q ss_pred CccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhcCccc
Q 018198 308 NSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKFSRYC 358 (359)
Q Consensus 308 ~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~v~ 358 (359)
+|||||+|.+|+||||+++...+. .+++|+||++.++++++++...+.|.
T Consensus 182 dSGGPLv~~~G~vvGI~s~~~~~~-~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 182 DSGGPLIDLNGQVLGVVFGAAIDD-AETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp CTTCEEECTTSCEEEEEEEECSSS-TTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred ccHHHEECCCCEEEEEEEeeccCC-CcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 999999999999999999986433 57899999999999999997666653
No 16
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.91 E-value=3.1e-24 Score=189.26 Aligned_cols=158 Identities=22% Similarity=0.335 Sum_probs=124.0
Q ss_pred ceEEEEEEeCCCEEEecccccCCCC---eEEEEe----cCCcEEEEE-EEEEcCCCCEEEEEEcCCC-----------CC
Q 018198 186 GSGAGFLWDQDGHIVTNYHVICGAS---TVKVSF----SDQSTFYAQ-VVGHDQVNDLAVLHIDAPN-----------HE 246 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv~~~~---~~~v~~----~~g~~~~~~-v~~~d~~~DlAll~v~~~~-----------~~ 246 (359)
..||||+|++ +|||||+||+.+.. .+.|.+ .+++.+.++ ++.+++.+|||||+++.+. ..
T Consensus 23 ~~c~G~lI~~-~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~ 101 (210)
T 2as9_A 23 KDATGFVIGK-NTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNEN 101 (210)
T ss_dssp SSCEEEEEET-TEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSSSSCEEEEECSEEEEEETTEEEGGGS
T ss_pred eeEEEEEEeC-CEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCCCcEEEEEecCccccccccccccccc
Confidence 4799999997 59999999996543 566654 367778874 7788889999999998731 13
Q ss_pred ccceEecCCCCCCCCCEEEEEecCCCCCCc----eeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEEE
Q 018198 247 LRPIHVSVSADLRVGKKIYAIGHPLGWSFT----CTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIG 322 (359)
Q Consensus 247 ~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~----~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viG 322 (359)
++++.|. ..+..|+.++++|||.+.... +..|.++... ...+++++.+|+|+|||||+|.+|+|||
T Consensus 102 v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~--------~~~i~~~~~~~~GdSGGPlv~~~g~lvG 171 (210)
T 2as9_A 102 VQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK--------DNILNFDAYIEPGNSGSPVLNSNNEVIG 171 (210)
T ss_dssp CCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE--------TTEEEEECCCCTTCTTCEEECTTSCEEE
T ss_pred cceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc--------CCeEEEcCccCCCCccCcEECCCCeEEE
Confidence 5666774 467899999999999865432 3667777652 2467889999999999999998999999
Q ss_pred EEeeecC-CCcceeEEEEehHHHHHHHHHHHhc
Q 018198 323 VNTFITS-GAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 323 i~~~~~~-~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
|++++.. .+....+|++|.+.+++++++..+.
T Consensus 172 I~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~~ 204 (210)
T 2as9_A 172 VVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ 204 (210)
T ss_dssp EECCSCCCTTCSSEEEEECCHHHHHHHHTTCCC
T ss_pred EEecccccCCccccccEEEcHHHHHHHHHhhhh
Confidence 9999873 2345678999999999999886553
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.91 E-value=2.5e-23 Score=175.36 Aligned_cols=136 Identities=21% Similarity=0.279 Sum_probs=104.3
Q ss_pred cceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEE
Q 018198 185 RGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKI 264 (359)
Q Consensus 185 ~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v 264 (359)
.+.||||+| +||||||+||+.+...+.|++ +++.++++++ .|+..||||||++.....+++++++++.. .+++
T Consensus 20 ~~~GSGfii--~g~IlTn~HVV~~~~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~~---~~~v 92 (163)
T 2w5e_A 20 EGKGTGFFS--GNDIVTAAHVVGNNTFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNPD---YSCV 92 (163)
T ss_dssp TEEEEEEEE--TTEEEEEHHHHTTCSEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSCC---TTEE
T ss_pred ceeEEEEEE--CCEEEecHHHhCCCceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCCC---CCEE
Confidence 468999999 579999999999999999999 9999999999 89999999999997543455566765432 4899
Q ss_pred EEEecCCCCCCceeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEe
Q 018198 265 YAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALP 340 (359)
Q Consensus 265 ~~iG~p~~~~~~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip 340 (359)
+++|||.+. ..+ +...... ....+.+++.+++|+|||||||.+|+||||++... +..+ +|+|.
T Consensus 93 ~~~G~p~~~-~~~-----s~~~~~~----~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~--g~~g-g~ai~ 155 (163)
T 2w5e_A 93 TVMAYVNED-LVV-----STAAAMV----YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT--GYTG-GAVII 155 (163)
T ss_dssp EEEEEETTE-EEE-----EEEEEEE----ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE--TTEE-EEEEC
T ss_pred EEEEeCCCC-EEE-----EEeccEE----cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc--cccc-CEEEe
Confidence 999999762 111 1111111 11346778999999999999999999999998764 2234 67775
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.89 E-value=2e-22 Score=181.51 Aligned_cols=158 Identities=23% Similarity=0.368 Sum_probs=117.3
Q ss_pred ceEEEEEEeCCCEEEecccccCCCCe--EEEEecCC-------------cEEEEEEEEEcC---CCCEEEEEEcCCCC--
Q 018198 186 GSGAGFLWDQDGHIVTNYHVICGAST--VKVSFSDQ-------------STFYAQVVGHDQ---VNDLAVLHIDAPNH-- 245 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv~~~~~--~~v~~~~g-------------~~~~~~v~~~d~---~~DlAll~v~~~~~-- 245 (359)
..|+||+|++ +||||||||+.+... +.|.+.+| ..+.++.+..++ .+|||||+++.+..
T Consensus 55 ~~c~G~lI~~-~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~~ 133 (242)
T 1agj_A 55 TSATGVLIGK-NTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGV 133 (242)
T ss_dssp EEEEEEECSS-SEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSC
T ss_pred ccEEEEEEeC-CEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCccc
Confidence 4799999996 599999999976432 34554333 246778888787 89999999997642
Q ss_pred ----CccceEecCCCCCCCCCEEEEEecCCCCCCc-eeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeE
Q 018198 246 ----ELRPIHVSVSADLRVGKKIYAIGHPLGWSFT-CTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSL 320 (359)
Q Consensus 246 ----~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~-~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~v 320 (359)
.+++++|+....+..|+.++++|||.+.... +....+.... ....+++++.+|+|+|||||++.+|+|
T Consensus 134 ~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~c~GdSGGPl~~~~g~l 206 (242)
T 1agj_A 134 SLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT-------LSRGLRYYGFTVPGNSGSGIFNSNGEL 206 (242)
T ss_dssp CHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC-------GGGSEEEECCCCGGGTTCEEECTTSEE
T ss_pred cccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec-------CCceEEEeCCcCCCCCchHhcccCCEE
Confidence 3788889765667899999999999865432 3333332221 112367788999999999999989999
Q ss_pred EEEEeeecCC--CcceeEEEEehH-HHHHHHHHH
Q 018198 321 IGVNTFITSG--AFSGIGFALPID-TVRGIVDQL 351 (359)
Q Consensus 321 iGi~~~~~~~--~~~~~~~aip~~-~i~~~l~~l 351 (359)
|||++++... ...+.+|++|+. .+++++++.
T Consensus 207 vGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 207 VGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp EEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred EEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 9999998631 235789999985 888888764
No 19
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.87 E-value=3.8e-22 Score=174.39 Aligned_cols=155 Identities=23% Similarity=0.354 Sum_probs=112.8
Q ss_pred eEEEEEEeCCCEEEecccccCCCC----eEEEEe----cCCcEEEE-EEEEEcCCCCEEEEEEcCCC-------CCccce
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGAS----TVKVSF----SDQSTFYA-QVVGHDQVNDLAVLHIDAPN-------HELRPI 250 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~----~~~v~~----~~g~~~~~-~v~~~d~~~DlAll~v~~~~-------~~~~~~ 250 (359)
.|+||+|++ +|||||+||+.+.. .+.+.+ .+++.+.+ +++.+++.+|||||+++.+. ..++++
T Consensus 23 ~c~G~lI~~-~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~v~pi 101 (200)
T 2w7s_A 23 GGTGVVVGK-NTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSYT 101 (200)
T ss_dssp TEEEEEEET-TEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGGSCCCC
T ss_pred eEEEEEEEC-CEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccccccce
Confidence 699999996 59999999996543 355543 45667776 57778889999999998742 135667
Q ss_pred EecCCCCCCCCCEEEEEecCCCCCC----ceeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEEEEEee
Q 018198 251 HVSVSADLRVGKKIYAIGHPLGWSF----TCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTF 326 (359)
Q Consensus 251 ~l~~~~~~~~G~~v~~iG~p~~~~~----~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~ 326 (359)
+|. ..+..|+.++++|||.+... .+..|.++... ..++++++.+|+|+|||||++.+|++|||+++
T Consensus 102 ~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~--------~~~~~~~~~~~~GdSGGPl~~~~g~lvGI~s~ 171 (200)
T 2w7s_A 102 KFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS--------GTFMEFDAYAQPGNSGSPVLNSKHELIGILYA 171 (200)
T ss_dssp CBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE--------TTEEEECSCCCTTCTTCEEECTTSCEEEEEEE
T ss_pred ecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC--------CCEEEEcceeCCCCccCeEECcCCEEEEEEec
Confidence 774 45678999999999975322 23567776542 24578899999999999999989999999999
Q ss_pred ecCCCcceeEEEE-ehHHHHHHHHHHH
Q 018198 327 ITSGAFSGIGFAL-PIDTVRGIVDQLV 352 (359)
Q Consensus 327 ~~~~~~~~~~~ai-p~~~i~~~l~~l~ 352 (359)
+...+....+|++ +...+++|+++.+
T Consensus 172 g~~~~~~~~~~~v~~~~~~~~wI~~~~ 198 (200)
T 2w7s_A 172 GSGKDESEKNFGVYFTPQLKEFIQNNI 198 (200)
T ss_dssp EC----CCCEEEEECCHHHHHHHHHTS
T ss_pred cccCCCCccceeeecHHHHHHHHHhhc
Confidence 8643212345566 4577777777644
No 20
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.87 E-value=9.5e-21 Score=173.65 Aligned_cols=177 Identities=20% Similarity=0.254 Sum_probs=128.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC----eEEEEec--------CCcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS----TVKVSFS--------DQSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~----~~~v~~~--------~g~~~~~~v~~~ 229 (359)
..+++|+|...... ....|+||+|+++ ||||||||+.+.. .+.|++. ++.....+++..
T Consensus 18 P~~~~v~i~~~~~~--------~~~~C~G~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~ 88 (274)
T 2o8l_A 18 HYAPVTYIQVEAPT--------GTFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKY 88 (274)
T ss_dssp GGTTEEEEEEEETT--------EEEEEEEEEEETT-EEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEEC
T ss_pred CcceEEEEEEEcCC--------CCEEEEEEEEECC-EEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeC
Confidence 35677777653211 1247999999976 9999999996644 3777642 344445566777
Q ss_pred cCCCCEEEEEEcCCC------CCccceEecCCCCCCCCCEEEEEecCCCCCCc---eeEeEEeeeecccCCcccccEEEE
Q 018198 230 DQVNDLAVLHIDAPN------HELRPIHVSVSADLRVGKKIYAIGHPLGWSFT---CTTGVISALDREIPGRLIQGVIQI 300 (359)
Q Consensus 230 d~~~DlAll~v~~~~------~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~---~~~G~vs~~~~~~~~~~~~~~i~~ 300 (359)
+..+||||||++.+. ..++++.|.....+..|+.++++|||.+.... ...|.++... ..+++.
T Consensus 89 ~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~--------~~~i~~ 160 (274)
T 2o8l_A 89 SGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK--------GEAMQY 160 (274)
T ss_dssp SSSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE--------TTEEEE
T ss_pred CCCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC--------CCeEEe
Confidence 788999999998753 35788899765567899999999999765332 3456665432 246788
Q ss_pred cccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhcCcc
Q 018198 301 DASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKFSRY 357 (359)
Q Consensus 301 ~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~v 357 (359)
++.+|+|+||||||+.+|+||||++++.... .+..+++. ..++.|+++.++.-.+
T Consensus 161 ~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~-~~~~~~~~-~~~~~wI~~~i~~~~~ 215 (274)
T 2o8l_A 161 DLSTTGGNSGSPVFNEKNEVIGIHWGGVPNE-FNGAVFIN-ENVRNFLKQNIEDINF 215 (274)
T ss_dssp SCCCCTTCTTCEEECTTSCEEEEEEEEETTT-EEEEEECC-HHHHHHHHHHCTTCEE
T ss_pred CcccCCCCchhheeccCCeEEEEEeCcccCC-CCceEEec-HHHHHHHHHHHhhhcc
Confidence 9999999999999988999999999986433 34566664 6778888877665443
No 21
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.85 E-value=1.5e-20 Score=171.86 Aligned_cols=177 Identities=21% Similarity=0.253 Sum_probs=127.2
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC----eEEEEec--------CCcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS----TVKVSFS--------DQSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~----~~~v~~~--------~g~~~~~~v~~~ 229 (359)
..+++|+|...... ....|+||+|+++ ||||||||+.+.. .+.|++. ++.....+++..
T Consensus 18 P~~~~v~l~~~~~~--------g~~~CgG~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~ 88 (268)
T 1wcz_A 18 HYAPVTYIQVEAPT--------GTFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKY 88 (268)
T ss_dssp GGTTEEEEEEEC-C--------CEEEEEEEECSSS-EEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEEC
T ss_pred CccEEEEEEEEcCC--------CCEEEEEEEEECC-EEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecC
Confidence 44567777653211 1247999999976 9999999997543 3777653 344444566677
Q ss_pred cCCCCEEEEEEcCCC------CCccceEecCCCCCCCCCEEEEEecCCCCCC---ceeEeEEeeeecccCCcccccEEEE
Q 018198 230 DQVNDLAVLHIDAPN------HELRPIHVSVSADLRVGKKIYAIGHPLGWSF---TCTTGVISALDREIPGRLIQGVIQI 300 (359)
Q Consensus 230 d~~~DlAll~v~~~~------~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~---~~~~G~vs~~~~~~~~~~~~~~i~~ 300 (359)
+..+||||||++.+. ..++++.|.....+..|+.++++|||.+... ....|.++... ..+++.
T Consensus 89 ~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~--------~~~i~~ 160 (268)
T 1wcz_A 89 SGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK--------GEAMQY 160 (268)
T ss_dssp SSSSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE--------TTEEEE
T ss_pred CCCCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC--------CCeEEE
Confidence 788999999999763 1467788865556788999999999976432 23456665432 246788
Q ss_pred cccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhcCcc
Q 018198 301 DASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKFSRY 357 (359)
Q Consensus 301 ~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~v 357 (359)
++.+|+|+|||||++.+|+||||++++.... .+..+++. ..++.++++.++.-++
T Consensus 161 ~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~-~~~~~~~~-~~~~~wI~~~i~~~~~ 215 (268)
T 1wcz_A 161 DLSTTGGNSGSPVFNEKNEVIGIHWGGVPNE-FNGAVFIN-ENVRNFLKQNIEDINF 215 (268)
T ss_dssp SBCCCTTCTTCEEECTTSCEEEEEEEEETTT-EEEEEECC-HHHHHHHHHHCTTCCB
T ss_pred ecccCCCCccCeEEccCCEEEEEEeCCccCC-cceeEEcC-HHHHHHHHHHHHhccc
Confidence 9999999999999988999999999986433 34566775 6788888877665433
No 22
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.85 E-value=1.7e-20 Score=163.30 Aligned_cols=154 Identities=20% Similarity=0.220 Sum_probs=122.1
Q ss_pred eEEEEEEeCC--CEEEecccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCccce-------EecCCC
Q 018198 187 SGAGFLWDQD--GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHD-QVNDLAVLHIDAPNHELRPI-------HVSVSA 256 (359)
Q Consensus 187 ~GsGfii~~~--g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d-~~~DlAll~v~~~~~~~~~~-------~l~~~~ 256 (359)
..+||++.++ +|||||+||+.+...+. .+ ..+.++++..+ +..|+||||++.+....+.+ .+....
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~~-~~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~ 92 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVNATAR---IG-GAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGST 92 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEE---ET-TEEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCC
T ss_pred CCcCEEEecCCeeEEEECcccCCCCCEEE---eC-CcEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCcc
Confidence 5689999753 69999999999887776 45 47889999999 99999999998743212222 344567
Q ss_pred CCCCCCEEEEEecCCCCCCceeEeEEeeeecccC--CcccccEEEEcccCCCCCccceeecCCCeEEEEEeeec-CC---
Q 018198 257 DLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP--GRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFIT-SG--- 330 (359)
Q Consensus 257 ~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~--~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~-~~--- 330 (359)
.+++|++|+.+|+|.+ ++.|+|+.+++... ...+.+++++++.+.+|||||||+|.+|++|||+++.. ..
T Consensus 93 ~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~~~ 168 (198)
T 2h5c_A 93 EAAVGAAVCRSGRTTG----YQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNGN 168 (198)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTTSB
T ss_pred cCCCCCeEEEeecCcc----eEEEEEEeeeeEEEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccCCC
Confidence 8899999999999876 78999999887542 22245689999999999999999998999999999984 21
Q ss_pred -----CcceeEEEEehHHHHHHH
Q 018198 331 -----AFSGIGFALPIDTVRGIV 348 (359)
Q Consensus 331 -----~~~~~~~aip~~~i~~~l 348 (359)
...+.+|++|++.+++.+
T Consensus 169 ~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 169 NCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp STTSCGGGCCEEEEEHHHHHHHH
T ss_pred ccccccCCceEEEEEHHHHHHHC
Confidence 224689999999988765
No 23
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.85 E-value=1.8e-20 Score=164.02 Aligned_cols=155 Identities=19% Similarity=0.352 Sum_probs=112.2
Q ss_pred eEEEEEEeCCCEEEecccccCCCC---eEEEEe----cCCcEEE-EEEEEEcCCCCEEEEEEcCCCC-----------Cc
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGAS---TVKVSF----SDQSTFY-AQVVGHDQVNDLAVLHIDAPNH-----------EL 247 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~---~~~v~~----~~g~~~~-~~v~~~d~~~DlAll~v~~~~~-----------~~ 247 (359)
.|+||+|+++ ||||||||+.+.. .+.+.. .++..+. .+++.++..+|||||+++.+.. .+
T Consensus 23 ~c~G~lI~~~-~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~v 101 (204)
T 2vid_A 23 SATGFVVGKN-TILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNV 101 (204)
T ss_dssp SCEEEEEETT-EEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEEEHHHHC
T ss_pred eEEEEEEECC-EEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCcccccccccccccccc
Confidence 6999999986 9999999997654 455532 3455666 4666777889999999986320 23
Q ss_pred cceEecCCCCCCCCCEEEEEecCCCCCC----ceeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEEEE
Q 018198 248 RPIHVSVSADLRVGKKIYAIGHPLGWSF----TCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGV 323 (359)
Q Consensus 248 ~~~~l~~~~~~~~G~~v~~iG~p~~~~~----~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi 323 (359)
+++.|.. .+..|+.++++|||.+... ....|.++... ...++.+..+|+|+|||||++.+|+|+||
T Consensus 102 ~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~--------~~~~~~~~~~~~GdSGGPl~~~~g~lvGI 171 (204)
T 2vid_A 102 TPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE--------GSSIVYSAHTESGNSGSPVLNSNNELVGI 171 (204)
T ss_dssp CCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE--------TTEEEECCCCCGGGTTCEEECTTSCEEEE
T ss_pred cccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc--------CCeEEEecccCCCCccCcEECCCCeEEEE
Confidence 5666743 5678999999999986443 34556666542 24678899999999999999989999999
Q ss_pred EeeecCC-CcceeEEEE-ehHHHHHHHHHHH
Q 018198 324 NTFITSG-AFSGIGFAL-PIDTVRGIVDQLV 352 (359)
Q Consensus 324 ~~~~~~~-~~~~~~~ai-p~~~i~~~l~~l~ 352 (359)
++++... .....+|++ +...+++++++.+
T Consensus 172 ~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 172 HFASDVKNDDNRNAYGVYFTPEIKKFIAENI 202 (204)
T ss_dssp EEEECC---CCCCEEEECCCHHHHHHHHHHS
T ss_pred EecCccCCCcccccceeEeCHHHHHHHHhhc
Confidence 9998631 223345555 4477888887754
No 24
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.81 E-value=5.6e-19 Score=152.41 Aligned_cols=158 Identities=21% Similarity=0.327 Sum_probs=114.4
Q ss_pred ceEE-EEEEeC--CCEEEecccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCEEEEEEcC-CCC---CccceEecCCCC
Q 018198 186 GSGA-GFLWDQ--DGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHD-QVNDLAVLHIDA-PNH---ELRPIHVSVSAD 257 (359)
Q Consensus 186 ~~Gs-Gfii~~--~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d-~~~DlAll~v~~-~~~---~~~~~~l~~~~~ 257 (359)
..|| ||++.. ++|||||+||+.+...+.+...++..+ +++...+ +.+||||||++. +.. .++++++.....
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~~~~~~-g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~~ 90 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSARTTVL-GTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAAN 90 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESSTTSCSEE-EEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecCCCceEe-EEEeccccCCCCEEEEEecCCCccccCccceeeeCCccc
Confidence 3566 999974 369999999999988877765444443 4556666 889999999987 321 345667754466
Q ss_pred CCCCCEEEEEecCCCCCCceeEeEEeeeecccC---CcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC-CCcc
Q 018198 258 LRVGKKIYAIGHPLGWSFTCTTGVISALDREIP---GRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS-GAFS 333 (359)
Q Consensus 258 ~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~---~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~-~~~~ 333 (359)
+..|+.++++||+.+ .+.|.+........ ...+...++.+...|+|||||||++. ++++||++++.. ....
T Consensus 91 ~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~-~~~vGI~s~g~~~~~~~ 165 (185)
T 2qa9_E 91 ATVGMAVTRRGSTTG----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSG-TRAIGLTSGGSGNCSSG 165 (185)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEET-TEEEEEEEEEEEETTTE
T ss_pred CCCCCEEEEecCCCc----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEEC-CEEEEEEEecCCCCCCC
Confidence 789999999999754 45666665543221 11123456777888999999999976 499999999863 2234
Q ss_pred eeEEEEehHHHHHHHH
Q 018198 334 GIGFALPIDTVRGIVD 349 (359)
Q Consensus 334 ~~~~aip~~~i~~~l~ 349 (359)
..+++.|++.++++++
T Consensus 166 ~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 166 GTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEEEEHHHHHHHHT
T ss_pred CcEEEEEHHHHHHhhC
Confidence 5789999999988875
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.81 E-value=5.3e-20 Score=166.08 Aligned_cols=132 Identities=24% Similarity=0.362 Sum_probs=98.4
Q ss_pred ceEEEEEEeCCCEEEecccccCCCC----eEEEEecC------------CcEEEEEEEEEcC---CCCEEEEEEcCCCC-
Q 018198 186 GSGAGFLWDQDGHIVTNYHVICGAS----TVKVSFSD------------QSTFYAQVVGHDQ---VNDLAVLHIDAPNH- 245 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv~~~~----~~~v~~~~------------g~~~~~~v~~~d~---~~DlAll~v~~~~~- 245 (359)
..|+||+|+++ |||||+||+.+.. .+.+.... ...+.++.+..++ .+|||||+++.+..
T Consensus 48 ~~c~G~lI~~~-~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~~ 126 (246)
T 1qtf_A 48 TLATGVLIGKN-TIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEKG 126 (246)
T ss_dssp EEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred ceEEEEEEECC-EEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCccc
Confidence 47999999975 9999999997643 35555431 1367788888888 89999999997641
Q ss_pred -----CccceEecCCCCCCCCCEEEEEecCCCCCCc-eeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCe
Q 018198 246 -----ELRPIHVSVSADLRVGKKIYAIGHPLGWSFT-CTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGS 319 (359)
Q Consensus 246 -----~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~-~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~ 319 (359)
.++++.|+....+..|+.++++|||.+.... .....+.... .++++..+|+|+|||||+|.+|+
T Consensus 127 ~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~~----------~~~~~~~~~~GdSGGPlv~~~g~ 196 (246)
T 1qtf_A 127 ESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMFN----------DSQYFGYTEVGNSGSGIFNLKGE 196 (246)
T ss_dssp CCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEESS----------SSBEESCCCGGGTTCEEECTTCC
T ss_pred cccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeecC----------cEEEeCCCCCCCchhheECCCCE
Confidence 3678888766667899999999999875432 1121121110 12345678999999999998999
Q ss_pred EEEEEeeec
Q 018198 320 LIGVNTFIT 328 (359)
Q Consensus 320 viGi~~~~~ 328 (359)
||||++++.
T Consensus 197 lvGI~s~g~ 205 (246)
T 1qtf_A 197 LIGIHSGKG 205 (246)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeccc
Confidence 999999975
No 26
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.80 E-value=1.3e-18 Score=150.30 Aligned_cols=152 Identities=19% Similarity=0.196 Sum_probs=117.6
Q ss_pred eEEEEEEeC-CC--EEEecccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCccc---------eEec
Q 018198 187 SGAGFLWDQ-DG--HIVTNYHVICGASTVKVSFSDQSTFYAQVVGHD-QVNDLAVLHIDAPNHELRP---------IHVS 253 (359)
Q Consensus 187 ~GsGfii~~-~g--~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d-~~~DlAll~v~~~~~~~~~---------~~l~ 253 (359)
..+||++.+ +| |||||+||+.+...+ .+.| +.++++..| +..|+||||++.+....+. +++.
T Consensus 15 CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l~ 89 (188)
T 2oua_A 15 CSVGFAATNASGQPGFVTAGHCGSVGTQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATVS 89 (188)
T ss_dssp EECCEEEECTTCCEEEEECGGGCCTTCEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEECC
T ss_pred EecCEEEEeCCCCEEEEECcccCCCCCEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEecc
Confidence 678999964 78 999999999766554 3445 788999998 9999999999864321221 3466
Q ss_pred CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC--CcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC-C
Q 018198 254 VSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP--GRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS-G 330 (359)
Q Consensus 254 ~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~--~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~-~ 330 (359)
.+..+++|++++.+|+|.+ ++.|+|+.+++... ...+.++++++....+|||||||+ .+|+++||+++... .
T Consensus 90 ~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~-~~~~~vGi~s~~~~~~ 164 (188)
T 2oua_A 90 GSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGGSFI-SGTQAQGVTSGGSGNC 164 (188)
T ss_dssp BCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEE-ETTEEEEEEEEEEEET
T ss_pred CccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEeCCCcEeeeEeeeeecCCCCccceEE-ECCEEEEEEeccCCCC
Confidence 6678899999999999876 68899998876542 112345678888888999999999 58999999999753 2
Q ss_pred CcceeEEEEehHHHHHHH
Q 018198 331 AFSGIGFALPIDTVRGIV 348 (359)
Q Consensus 331 ~~~~~~~aip~~~i~~~l 348 (359)
...+.+|++|++.+++.+
T Consensus 165 ~~~~~~~~~pi~~~l~~~ 182 (188)
T 2oua_A 165 RTGGTTFYQEVNPMLNSW 182 (188)
T ss_dssp TTEEEEEEEESHHHHHHT
T ss_pred CCCCceEEEEHHHHHHHc
Confidence 335689999999887654
No 27
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.80 E-value=1.1e-18 Score=150.71 Aligned_cols=155 Identities=17% Similarity=0.230 Sum_probs=116.0
Q ss_pred eEEEEEEeCC--CEEEecccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCccceE--------ecCC
Q 018198 187 SGAGFLWDQD--GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHD-QVNDLAVLHIDAPNHELRPIH--------VSVS 255 (359)
Q Consensus 187 ~GsGfii~~~--g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d-~~~DlAll~v~~~~~~~~~~~--------l~~~ 255 (359)
..+||++.++ +|||||+||+.+..++. ..++....+++...+ +..|+||||++.+....+.+. +..+
T Consensus 14 CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~~~i~~~ 91 (187)
T 1hpg_A 14 CSAAFNVTKGGARYFVTAGHCTNISANWS--ASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGSTQDISSA 91 (187)
T ss_dssp EECCEEEEETTEEEEEECHHHHTTCSEEE--SSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECSSSCEEECCEE
T ss_pred CcceEEEEECCeeEEEECcccCCCCCeEE--eCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEecCCceeeeccc
Confidence 4559999875 49999999999887654 455554445655555 788999999987432223333 3345
Q ss_pred CCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC--CcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecCC-Cc
Q 018198 256 ADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP--GRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITSG-AF 332 (359)
Q Consensus 256 ~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~--~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~-~~ 332 (359)
..+++|++|+.+|+|.+ ++.|+|+.+++... .....+++++++.+++|||||||++. ++++||+++.... ..
T Consensus 92 ~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~~~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~~~~~ 166 (187)
T 1hpg_A 92 ANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSGCSGT 166 (187)
T ss_dssp CCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESCCBTT
T ss_pred cCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEeCCCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCCCCCC
Confidence 67899999999999875 68899998876542 22345689999999999999999976 5999999998631 22
Q ss_pred ceeEEEEehHHHHHHH
Q 018198 333 SGIGFALPIDTVRGIV 348 (359)
Q Consensus 333 ~~~~~aip~~~i~~~l 348 (359)
.+.+|++|++.+++.|
T Consensus 167 ~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 167 AGSAIHQPVTEALSAY 182 (187)
T ss_dssp BCCCEEEEHHHHHHHH
T ss_pred CCceEEEEHHHHHHHc
Confidence 4679999999888765
No 28
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.77 E-value=8.9e-18 Score=145.00 Aligned_cols=148 Identities=22% Similarity=0.311 Sum_probs=113.4
Q ss_pred eEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCcc--------ceEecCCCC
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHD-QVNDLAVLHIDAPNHELR--------PIHVSVSAD 257 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d-~~~DlAll~v~~~~~~~~--------~~~l~~~~~ 257 (359)
.-+||+++. +||||+||+.+...+. +.| ++++..| +..|+||||++.+....+ ++++..+..
T Consensus 17 CT~Gf~~~~--~ilTa~Hc~~~~~~v~--~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~ 87 (189)
T 2ea3_A 17 CSIGFAVNG--GFITAGHCGRTGATTA--NPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTA 87 (189)
T ss_dssp EECCEEETT--EEEECGGGCCTTCEEE--TTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCC
T ss_pred CccCEEccC--eEEEchhcCCCCCEEE--eCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcC
Confidence 557888873 9999999998877643 444 6778888 899999999987532122 334666677
Q ss_pred CCCCCEEEEEecCCCCCCceeEeEEeeeecccC--CcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC-CCcce
Q 018198 258 LRVGKKIYAIGHPLGWSFTCTTGVISALDREIP--GRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS-GAFSG 334 (359)
Q Consensus 258 ~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~--~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~-~~~~~ 334 (359)
+++|+.++.+|++.+ ++.|+|+.+++... ...+.++++++..+.+|||||||++ +|+++||+++... ....+
T Consensus 88 ~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~~~~ 162 (189)
T 2ea3_A 88 APVGSAVCRSGSTTG----WHCGTITALNSSVTYPEGTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCRTGG 162 (189)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTEE
T ss_pred CCCCCEEEEEEeCCc----cEEEEEEecceEEEeCCccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCCCCC
Confidence 899999999999876 67899988876542 1123356788888889999999995 8999999999753 22346
Q ss_pred eEEEEehHHHHHHH
Q 018198 335 IGFALPIDTVRGIV 348 (359)
Q Consensus 335 ~~~aip~~~i~~~l 348 (359)
.+|++|++.+++.+
T Consensus 163 ~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 163 TTFFQPVNPILQAY 176 (189)
T ss_dssp EEEEEEHHHHHHHH
T ss_pred cEEEEEHHHHHHHC
Confidence 89999999888766
No 29
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.76 E-value=7.1e-18 Score=145.20 Aligned_cols=150 Identities=22% Similarity=0.290 Sum_probs=113.8
Q ss_pred eEEEEEEeC--CCEEEecccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCcc--------ceEecCC
Q 018198 187 SGAGFLWDQ--DGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHD-QVNDLAVLHIDAPNHELR--------PIHVSVS 255 (359)
Q Consensus 187 ~GsGfii~~--~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d-~~~DlAll~v~~~~~~~~--------~~~l~~~ 255 (359)
.-+||++.+ ++|+|||+||+.+...+.+ ..++++..+ +..|+||||++.+....+ ++++..+
T Consensus 16 CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~~~ 88 (186)
T 2pfe_A 16 CSIGFSVRQGSQTGFATAGHCGSTGTRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVTGS 88 (186)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECCBC
T ss_pred EEeeEEEEcCCeeEEEEChhhCCCCCEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecCCC
Confidence 346999964 4699999999988776664 446777776 899999999987532122 2345556
Q ss_pred CCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC--CcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC-CCc
Q 018198 256 ADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP--GRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS-GAF 332 (359)
Q Consensus 256 ~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~--~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~-~~~ 332 (359)
..+++|++++.+|++.+ ++.|+|+.+++... ...+.+.++++....+|||||||++ +|+++||+++... ...
T Consensus 89 ~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~~~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~c~~ 163 (186)
T 2pfe_A 89 QEAATGSSVCRSGATTG----WRCGTIQSKNQTVRYAEGTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGDCRS 163 (186)
T ss_dssp CCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTT
T ss_pred CCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeCCceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCCCCCC
Confidence 77899999999999876 78899988877642 2223456777777889999999995 8899999999753 223
Q ss_pred ceeEEEEehHHHHHHH
Q 018198 333 SGIGFALPIDTVRGIV 348 (359)
Q Consensus 333 ~~~~~aip~~~i~~~l 348 (359)
.+.+|++|++.+++.+
T Consensus 164 ~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 164 GGITFFQPINPLLSYF 179 (186)
T ss_dssp EEEEEEEEHHHHHHHH
T ss_pred CCcEEEEEHHHHHHHC
Confidence 4689999998887765
No 30
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.72 E-value=3.1e-17 Score=140.99 Aligned_cols=150 Identities=18% Similarity=0.288 Sum_probs=103.3
Q ss_pred eEE-EEEEeC--CCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCC---Cccce-----EecCC
Q 018198 187 SGA-GFLWDQ--DGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNH---ELRPI-----HVSVS 255 (359)
Q Consensus 187 ~Gs-Gfii~~--~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~---~~~~~-----~l~~~ 255 (359)
.|| ||+|.+ ++|||||+||+.+...+.+-..+ ....+.+|+||||++.+.. .+.++ .+...
T Consensus 13 ~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~~~ 84 (181)
T 2sga_A 13 RCSLGFNVSVNGVAHALTAGHCTNISASWSIGTRT--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDITTA 84 (181)
T ss_dssp EEECCEEEEETTEEEEEECHHHHTTCSEETTEEEE--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECCEE
T ss_pred cEeccEEEEECCceEEEECcccCCCCCceeeccee--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeeccc
Confidence 566 999974 35999999999876554222211 1223678999999986321 12222 22234
Q ss_pred CCCCCCCEEEEEecCCCCCCceeEeEEeeeecccC---CcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecC-CC
Q 018198 256 ADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIP---GRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITS-GA 331 (359)
Q Consensus 256 ~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~---~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~-~~ 331 (359)
..+.+|+.++++|++.+ .+.|.++..+.... +..+.+.++++...++|||||||++.+ +++||++++.. ..
T Consensus 85 ~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~~~~ 159 (181)
T 2sga_A 85 GNAFVGQAVQRSGSTTG----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSGNCR 159 (181)
T ss_dssp CCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEETT
T ss_pred ccCCCCCEEEEeecCCC----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCCCCc
Confidence 66789999999999865 45677766654321 111334677788888999999999765 99999999863 22
Q ss_pred cceeEEEEehHHHHHHHH
Q 018198 332 FSGIGFALPIDTVRGIVD 349 (359)
Q Consensus 332 ~~~~~~aip~~~i~~~l~ 349 (359)
....+|+.|++.++++|.
T Consensus 160 ~~~~~v~~~v~~~~~~l~ 177 (181)
T 2sga_A 160 TGGTTFYQPVTEALSAYG 177 (181)
T ss_dssp TEEEEEEEEHHHHHHHHT
T ss_pred CCCceEEEEHHHHHHhcC
Confidence 245799999999888764
No 31
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.71 E-value=3.2e-17 Score=136.67 Aligned_cols=117 Identities=17% Similarity=0.272 Sum_probs=92.3
Q ss_pred ccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEE---cCCCCCccceEecCCCCCCC
Q 018198 184 LRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHI---DAPNHELRPIHVSVSADLRV 260 (359)
Q Consensus 184 ~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v---~~~~~~~~~~~l~~~~~~~~ 260 (359)
+.+.||||+|+.++++||++||+.+.....|++ +|.++. +.+++..|+|++++ +.+ ..+|+++++. +++
T Consensus 13 ~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~-~G~~~~---Vgf~~~~DlA~l~v~~~~~~-g~~P~l~las---p~v 84 (198)
T 1mbm_A 13 SYGTGSVWTRNNEVVVLTASHVVGRANMATLKI-GDAMLT---LTFKKNGDFAEAVTTQSELP-GNWPQLHFAQ---PTT 84 (198)
T ss_dssp SEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE-TTEEEE---EECEEETTEEEEEECTTTSC-SCCCBCCBCC---CCS
T ss_pred cCCccceEEECCCeEEEEeeeEEccCceEEEEE-CCEEEE---eecccCCcEEEEEeeccCCC-CCCcccccCC---Ccc
Confidence 357899999999999999999999999999999 998887 66779999999999 443 3567888843 688
Q ss_pred CCEEEEEecCCCCCCceeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeec
Q 018198 261 GKKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 261 G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
|+.-+. .+.|.+..+... ...++++ .|||||||++|.+ +||||+++..
T Consensus 85 G~a~~~----------~~tG~~~~l~g~------~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~s~ 132 (198)
T 1mbm_A 85 GPASWC----------TATGDEEGLLSG------EVCLAWT---TSGDSGSAVVQGD-AVVGVHTGSN 132 (198)
T ss_dssp EEEEEE----------ETTEEEEEEECS------SCEECCC---CGGGTTCEEEETT-EEEEEEEEEE
T ss_pred cceEEe----------eccccEEEEecC------CceeEcC---CCCCCCCccccCC-eEEEEEeccC
Confidence 884333 455666666421 2455665 7899999999988 9999999943
No 32
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.63 E-value=2e-14 Score=127.44 Aligned_cols=178 Identities=20% Similarity=0.255 Sum_probs=117.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC--CeEEEEecC------CcEEEEEEEEEcCC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA--STVKVSFSD------QSTFYAQVVGHDQV- 232 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~--~~~~v~~~~------g~~~~~~v~~~d~~- 232 (359)
..|.+|.|.... ...|+|++|+++ ||||+|||+.+. ..+.|++.. +..+..+-+..+++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y 78 (224)
T 1pq7_A 11 DFPFIVSISRNG-----------GPWCGGSLLNAN-TVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSY 78 (224)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEEEETT-EEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTC
T ss_pred CcCeEEEEEECC-----------CeEEEEEEecCC-EEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCC
Confidence 457888886321 237999999987 999999999753 457777632 33455555556654
Q ss_pred ----CCEEEEEEcCCCC---CccceEecC-CCCCCCCCEEEEEecCCCCC------CceeEeEEeeeecccC------Cc
Q 018198 233 ----NDLAVLHIDAPNH---ELRPIHVSV-SADLRVGKKIYAIGHPLGWS------FTCTTGVISALDREIP------GR 292 (359)
Q Consensus 233 ----~DlAll~v~~~~~---~~~~~~l~~-~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~~~~~------~~ 292 (359)
+|||||+++.+.. .+.++.|.. ......|+.+++.||+.... ..+....+..+....+ ..
T Consensus 79 ~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~ 158 (224)
T 1pq7_A 79 SGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSA 158 (224)
T ss_dssp BTTBTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTT
T ss_pred CCCCCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCC
Confidence 5999999987643 456777763 33457899999999975321 2233333333322111 11
Q ss_pred ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHH
Q 018198 293 LIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQL 351 (359)
Q Consensus 293 ~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l 351 (359)
....+++.. ...|.|+|||||+..+|.++||++++..-.. ..-+....+...++|+++.
T Consensus 159 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 223 (224)
T 1pq7_A 159 ITNQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTY 223 (224)
T ss_dssp SCTTEEEECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHHH
T ss_pred CCCCeEEeecCCCCCCCCcCCCCcceECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHhh
Confidence 223566663 3578999999999778999999999862111 2235667777788877763
No 33
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.63 E-value=1.1e-13 Score=122.63 Aligned_cols=181 Identities=15% Similarity=0.149 Sum_probs=117.3
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcCC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQV 232 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~~ 232 (359)
..|.+|.|........ ...|+|.+|+++ ||||+|||+.. .+.|.+.. ...+...-+..++.
T Consensus 11 ~~Pw~v~l~~~~~~~~-------~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 80 (226)
T 4ag1_A 11 SRPYMAYLEIVTSNGP-------SKFCGGFLIRRN-FVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPK 80 (226)
T ss_dssp SSTTEEEEEEECSSSS-------CEEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCCcEEEEEEEcCCCc-------ccEEEEEEEeCC-EEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCC
Confidence 4678888876432211 237999999987 99999999954 56666632 12344444455544
Q ss_pred -------CCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC----Cc
Q 018198 233 -------NDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP----GR 292 (359)
Q Consensus 233 -------~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~----~~ 292 (359)
+|||||+++.+.. .+.++.|... ..+..|+.+++.||.... ...+....+..+....+ ..
T Consensus 81 y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 160 (226)
T 4ag1_A 81 YNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDF 160 (226)
T ss_dssp CCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTC
T ss_pred CCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCc
Confidence 5999999987542 4556666533 235689999999997532 22233333333332221 11
Q ss_pred ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 293 LIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 293 ~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
.....++.. ...|.|+|||||+ .++.++||.+++..... .-+.+..+...++|+++.++.
T Consensus 161 ~~~~~~Ca~~~~~~~~~C~GDsGgPl~-~~~~l~Gi~S~g~~c~~-~p~vyt~v~~~~~WI~~~i~~ 225 (226)
T 4ag1_A 161 DHNLQLCVGNPRKTKSAFKGDSGGPLL-CAGVAQGIVSYGRSDAK-PPAVFTRISHYRPWINQILQA 225 (226)
T ss_dssp CTTTEEEESCTTSCCBCCTTCTTCEEE-ETTEEEEEEEECBTTCC-SCEEEEEHHHHHHHHHHHHHH
T ss_pred CccceEeeccCCCCCcCccCCCCCceE-EcCEEEEEEEECCCCCC-CCCEEEEhHHHHHHHHHHHhc
Confidence 223456653 3578899999999 47899999999874332 256778899999999887753
No 34
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.62 E-value=7.9e-14 Score=123.58 Aligned_cols=178 Identities=17% Similarity=0.207 Sum_probs=115.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC--CeEEEEecCC----------cEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA--STVKVSFSDQ----------STFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~--~~~~v~~~~g----------~~~~~~v~~~ 229 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+. ..+.|++... ..+..+-+..
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~ 78 (225)
T 1a7s_A 11 QFPFLASIQNQG-----------RHFCGGALIHAR-FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSE 78 (225)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEEEETT-EEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEEC
T ss_pred CCCcEEEEecCC-----------CcEEEEEEeeCC-EEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEec
Confidence 457788886421 237999999987 999999999753 4577777421 2333333333
Q ss_pred c------CCCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccCCccc
Q 018198 230 D------QVNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIPGRLI 294 (359)
Q Consensus 230 d------~~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~~~~~ 294 (359)
+ ..+|||||+++.+.. .+.++.|.... .+..|+.+++.||+.... ..+....+..+....+..
T Consensus 79 h~y~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~-- 156 (225)
T 1a7s_A 79 NGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP-- 156 (225)
T ss_dssp SSCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT--
T ss_pred ccccCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc--
Confidence 2 346999999987643 46677775433 346899999999985421 223333343333322221
Q ss_pred ccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhcC
Q 018198 295 QGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKFS 355 (359)
Q Consensus 295 ~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g 355 (359)
.+++.. ...|.|+|||||+. +|.++||.+++..+....-+.+..+...++|+++.++.-
T Consensus 157 -~~~Ca~~~~~~~~~C~GDSGgPl~~-~g~l~Gi~S~g~~~C~~~p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 157 -NNVCTGVLTRRGGICNGDGGTPLVC-EGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp -TEEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTSSCEEEEEGGGGHHHHHHHHHSC
T ss_pred -CceEEeccCCCCCcccCCCcchhee-CCEEEEEEEEccCCcCCCCcEEEEhHHhHHHHHHHhcCC
Confidence 455553 36789999999995 589999999984222222567788899999998887653
No 35
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.62 E-value=3.8e-14 Score=125.65 Aligned_cols=179 Identities=16% Similarity=0.168 Sum_probs=116.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcCC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQV 232 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~~ 232 (359)
..|.+|.|...... ....|+|.+|+++ ||||+|||+.+ .+.|++.. ...+..+-+..+++
T Consensus 11 ~~Pw~v~l~~~~~~--------~~~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (224)
T 1cgh_A 11 SRPYMAYLQIQSPA--------GQSRCGGFLVRED-FVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQ 79 (224)
T ss_dssp SSTTEEEEEESTTT--------TSCEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCCcEEEEEEECCC--------CCeEEEEEEeeCC-EEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCC
Confidence 45778888653211 1237999999987 99999999976 35555532 23445554555543
Q ss_pred -------CCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC----CCceeEeEEeeeecccC----Cc-
Q 018198 233 -------NDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW----SFTCTTGVISALDREIP----GR- 292 (359)
Q Consensus 233 -------~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~----~~~~~~G~vs~~~~~~~----~~- 292 (359)
+|||||+++.+.. .+.|+.|.... .+..|+.+++.||.... ...+....+..+....+ +.
T Consensus 80 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~ 159 (224)
T 1cgh_A 80 YNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSY 159 (224)
T ss_dssp CBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTC
T ss_pred CCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcC
Confidence 5999999987643 46777776433 35789999999997542 22333333333321111 11
Q ss_pred ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 293 LIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 293 ~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
....+++.. ...|.|+|||||+. +|.++||.+++. .....-+....+...+.|+++.++
T Consensus 160 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~-~~~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 160 DPRRQICVGDRRERKAAFKGDSGGPLLC-NNVAHGIVSYGK-SSGVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp CTTTEEEECCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECC-TTCCSCEEEEEGGGGHHHHHHHHH
T ss_pred CCcceEeeccCCCCCeEeeCCCccceEE-ccEEEEEEEEEC-CCCCCCeEEEEHHHhHHHHHHHhh
Confidence 112367763 35789999999995 789999999986 222234567778888888888765
No 36
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.62 E-value=7.3e-14 Score=123.87 Aligned_cols=175 Identities=17% Similarity=0.230 Sum_probs=114.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|..|.|... . ...|+|.+|+++ ||||+|||+.. .+.|++.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~----~-------~~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 76 (225)
T 1npm_A 11 SQPWQAALFQG----E-------RLICGGVLVGDR-WVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPC 76 (225)
T ss_dssp SSTTEEEEEET----T-------EEEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTT
T ss_pred CcCcEEEEeeC----C-------ceEEEEEEECCC-EEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCC
Confidence 45778888531 1 237999999987 99999999964 34555532 2233344333333
Q ss_pred ---------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeeccc----
Q 018198 232 ---------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDREI---- 289 (359)
Q Consensus 232 ---------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~---- 289 (359)
.+|||||+++.+.. .+.|+.|.. .....|+.+++.||.... ...+....+..+....
T Consensus 77 y~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 155 (225)
T 1npm_A 77 YNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLAN-LCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERA 155 (225)
T ss_dssp CCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHH
T ss_pred CCCCCccCccccEEEEeeCCcccCCCceeceECCC-CCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHH
Confidence 24999999987543 467888864 446789999999997531 1233334443332211
Q ss_pred -CCcccccEEEEc----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHH
Q 018198 290 -PGRLIQGVIQID----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 290 -~~~~~~~~i~~~----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~ 352 (359)
.......+++.. ...|.|+|||||+. +|+++||++++..+. ...-+.+..+...++|+++.+
T Consensus 156 ~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (225)
T 1npm_A 156 YPGKITEGMVCAGSSNGADTCQGDSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTM 224 (225)
T ss_dssp STTTCCTTEEEEECTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHH
T ss_pred hCCCCCCCEEeecCCCCCeecCCCCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 111223566663 46789999999994 789999999984222 123466788888888888764
No 37
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.61 E-value=6.7e-14 Score=125.29 Aligned_cols=179 Identities=16% Similarity=0.195 Sum_probs=115.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC---CCeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG---ASTVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~---~~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+ ...+.|++.. ...+..+-+..
T Consensus 13 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 80 (240)
T 1mza_A 13 SRPFMASIQYGG-----------HHVCGGVLIDPQ-WVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIP 80 (240)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEEEETT-EEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEE
T ss_pred CCCeEEEEeeCC-----------ceEEEEEEecCC-EEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEe
Confidence 457888886421 237999999987 99999999864 4567777632 12344444444
Q ss_pred cC-------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeeccc----
Q 018198 230 DQ-------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDREI---- 289 (359)
Q Consensus 230 d~-------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~---- 289 (359)
++ .+|||||+++.+.. .+.++.|.....+..|+.+++.||.... ...+....+..+....
T Consensus 81 hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~ 160 (240)
T 1mza_A 81 FSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQ 160 (240)
T ss_dssp CCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTST
T ss_pred CCCccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCc
Confidence 43 46999999987543 4677778653566789999999997532 2233333343332111
Q ss_pred --C-C--cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCc-ceeEEEEehHH-HHHHHHHHHh
Q 018198 290 --P-G--RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF-SGIGFALPIDT-VRGIVDQLVK 353 (359)
Q Consensus 290 --~-~--~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~-~~~~~aip~~~-i~~~l~~l~~ 353 (359)
. . .....+++.. ...|.|+|||||+. +|.++||++++..-+. ..-+....+.. .++|+++.++
T Consensus 161 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~~~ 235 (240)
T 1mza_A 161 SYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLV 235 (240)
T ss_dssp TTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEE-TTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHHTC
T ss_pred ceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEE-CCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHhcc
Confidence 1 1 1223566663 35789999999995 7899999999862111 12344555665 8888877654
No 38
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.61 E-value=3.3e-14 Score=125.86 Aligned_cols=179 Identities=18% Similarity=0.222 Sum_probs=117.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~------g~~~~~~v~~~d~- 231 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+. ..+.|.+.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~ 78 (222)
T 1eq9_A 11 KYPYQVSLRLSG-----------SHRCGASILDNN-NVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKN 78 (222)
T ss_dssp SCTTEEEEEETT-----------EEEEEEEECSSS-EEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTT
T ss_pred CcceEEEEEeCC-----------CeEEEEEEeeCC-EEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCC
Confidence 457788886321 237999999987 999999999763 467777742 3445555455554
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccCC----cc
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIPG----RL 293 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~~----~~ 293 (359)
.+|||||+++.+.. .+.|+.|........|+.+++.||..... ..+....+..+....+. ..
T Consensus 79 y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 158 (222)
T 1eq9_A 79 YDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWRV 158 (222)
T ss_dssp CBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSSC
T ss_pred CCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCCC
Confidence 46999999987643 46788886554446899999999975321 22333333332211110 12
Q ss_pred cccEEEEc----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 294 IQGVIQID----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 294 ~~~~i~~~----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
...+++.. ...|.|+|||||+. +|.++||.+++..-....-+....+...++|+++.++
T Consensus 159 ~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~p~vyt~V~~~~~WI~~~~~ 221 (222)
T 1eq9_A 159 IDSHICTLTKRGEGACHGDSGGPLVA-NGAQIGIVSFGSPCALGEPDVYTRVSSFVSWINANLK 221 (222)
T ss_dssp CTTEEEECCCTTCBCCTTCTTCEEEE-TTEEEEEEEECSTTTSSSCEEEEEGGGGHHHHHHTSC
T ss_pred CccEEeecCCCCCeeeeCCccceEEE-CCEEEEEEEECCCcCCCCCCEEEEHHHHHHHHHHHhh
Confidence 23456653 35789999999995 7899999999863221234667778888888887553
No 39
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.60 E-value=8e-14 Score=124.56 Aligned_cols=179 Identities=16% Similarity=0.221 Sum_probs=116.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEec-------CCcEEEEEEEEEcC---
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFS-------DQSTFYAQVVGHDQ--- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~-------~g~~~~~~v~~~d~--- 231 (359)
..|..|.|... ....|+|.+|+++ ||||+|||+.+...+.+-.. .+..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~-----------~~~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~ 78 (237)
T 2zch_P 11 SQPWQVLVASR-----------GRAVCGGVLVHPQ-WVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYD 78 (237)
T ss_dssp SCTTEEEEESS-----------SSEEEEEEEEETT-EEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSC
T ss_pred CCCCEEEEeeC-----------CCeEEEEEEecCC-EEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcc
Confidence 35777887632 1237999999987 99999999987554333221 12344444444443
Q ss_pred ---------------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeec
Q 018198 232 ---------------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDR 287 (359)
Q Consensus 232 ---------------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~ 287 (359)
.+|||||+++.+.. .+.++.|.. .....|+.+++.||.... ...+....+..+..
T Consensus 79 ~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~ 157 (237)
T 2zch_P 79 MSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPT-QEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISN 157 (237)
T ss_dssp GGGGTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCS-SCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECH
T ss_pred hhhhcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCC-CCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCH
Confidence 56999999987643 467777864 456789999999997532 12233333333322
Q ss_pred cc-----CCcccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHhc
Q 018198 288 EI-----PGRLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 288 ~~-----~~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
.. .......+++.. ...|.|||||||+ .++.++||.+++..+. ...-+....+...++|+++.++.
T Consensus 158 ~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 235 (237)
T 2zch_P 158 DVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLV-CNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIVA 235 (237)
T ss_dssp HHHHHHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEE-SSSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred HHhcccccCCCCceEEeecCCCCCCcccCCCccCeEE-ECCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence 11 111223456653 3578999999999 5789999999986222 12346678888899998887653
No 40
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.60 E-value=1.3e-13 Score=121.84 Aligned_cols=180 Identities=16% Similarity=0.196 Sum_probs=117.2
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ 231 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~ 231 (359)
...|.+|.|....... ....|+|.+|+++ ||||+|||+.. .+.|.+.. ...+..+-+..++
T Consensus 10 ~~~Pw~v~l~~~~~~~-------~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp 79 (224)
T 3rp2_A 10 HSRPYMAHLDIVTEKG-------LRVICGGFLISRQ-FVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHE 79 (224)
T ss_dssp TSCTTEEEEEEECTTS-------CEEEEEEEESSSS-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECT
T ss_pred CCCCcEEEEEEecCCC-------cEEEEEeEEeeCC-EEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECC
Confidence 3467888887643211 1237999999987 99999999854 56666632 1234455455554
Q ss_pred C-------CCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC----C
Q 018198 232 V-------NDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP----G 291 (359)
Q Consensus 232 ~-------~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~----~ 291 (359)
. +|||||+++.+.. .+.++.|... ..+..|+.+++.||.... ...+....+..+....+ .
T Consensus 80 ~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 159 (224)
T 3rp2_A 80 SYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRY 159 (224)
T ss_dssp TCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTC
T ss_pred CccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccc
Confidence 3 6999999987643 4566677543 335789999999996421 12233333333332222 1
Q ss_pred cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHH
Q 018198 292 RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 292 ~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 352 (359)
......++.. ...|.|+|||||+. ++.++||.+++.... ..-..+..+...+.|+++.+
T Consensus 160 ~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~-~~p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 160 YEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHPDA-KPPAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp CCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCTTC-CSCEEEEEHHHHHHHHHHHH
T ss_pred cCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCCCC-CCCcEEEEHHHhHHHHHHHh
Confidence 1223456653 35788999999994 789999999986432 22567788999999998865
No 41
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.60 E-value=4.6e-14 Score=125.34 Aligned_cols=179 Identities=13% Similarity=0.162 Sum_probs=115.3
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|....... ...|+|.+|+++ ||||+|||+.+ .+.|++.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~~~~--------~~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (227)
T 1iau_A 11 SRPYMAYLMIWDQKS--------LKRCGGFLIRDD-FVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPA 79 (227)
T ss_dssp SSTTEEEEEEECSSC--------EEEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CcCcEEEEEEECCCC--------ceEEEEEEEcCC-EEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCC
Confidence 357888886532110 137999999987 99999999975 45666632 2334454444444
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC-----C
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP-----G 291 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~-----~ 291 (359)
.+|||||+++.+.. .+.|+.|.... .+..|+.+++.||.... ...+....+..+....+ .
T Consensus 80 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~ 159 (227)
T 1iau_A 80 YNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRH 159 (227)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTT
T ss_pred CCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhcc
Confidence 45999999987543 46677776433 35789999999997532 12333333333321111 1
Q ss_pred ccc-ccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 292 RLI-QGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 292 ~~~-~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
... ..+++.. ...|.|+|||||+. +|.++||++++. +....-+....+...+.|+++.++
T Consensus 160 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~gc-~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 160 YYDSTIELCVGDPEIKKTSFKGDSGGPLVC-NKVAQGIVSYGR-NNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp TCCTTTEEEESCTTSCCBCCTTCTTSEEEE-TTEEEEEEEEEC-TTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred ccCCCcEEEeECCCCCCeeeecCCCchheE-eeEEEEEEeEec-CCCCCCeEEEEHHHHHHHHHHHHh
Confidence 111 1266663 35789999999995 789999999983 211224566788888888887765
No 42
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.60 E-value=1.5e-13 Score=121.86 Aligned_cols=180 Identities=15% Similarity=0.179 Sum_probs=117.3
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcCC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQV 232 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~~ 232 (359)
..|.+|.|........ ...|+|.+|+++ ||||+|||+. ..+.|.+.. ...+..+-+..++.
T Consensus 11 ~~Pw~v~l~~~~~~~~-------~~~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 80 (227)
T 3fzz_A 11 SRPYMAYYEFLKVGGK-------KMFCGGFLVRDK-FVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPHPD 80 (227)
T ss_dssp SSTTEEEEEEECSSSC-------EEEEEEEEEETT-EEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CcCCEEEEEEEeCCCc-------eeEEEEEEEeCC-EEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEECcC
Confidence 4578888876432211 237999999987 9999999985 355666632 23344554555554
Q ss_pred -------CCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC------
Q 018198 233 -------NDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP------ 290 (359)
Q Consensus 233 -------~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~------ 290 (359)
+|||||+++.+.. .+.++.|... ..+..|+.+++.||.... ...+....+..+....+
T Consensus 81 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 160 (227)
T 3fzz_A 81 YNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQS 160 (227)
T ss_dssp CBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTT
T ss_pred CCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhcc
Confidence 5999999987543 4567777543 335789999999997532 12233333433322111
Q ss_pred CcccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 291 GRLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 291 ~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
.......++.. ...|.|+|||||+. ++.++||.+++.... ..-+.+..+...++|+++.++
T Consensus 161 ~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~c~-~~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 161 SYNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQTDG-SAPQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp TCCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECCTTC-SSSEEEEEGGGTHHHHHHHHT
T ss_pred ccCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECCCCC-CCCeEEEEhHHhHHHHHHHHh
Confidence 11123556653 35788999999994 679999999986322 224667788888999888765
No 43
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.59 E-value=2.4e-13 Score=120.10 Aligned_cols=178 Identities=16% Similarity=0.210 Sum_probs=114.2
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC--eEEEEecC---------CcEEEEEEEEEc
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS--TVKVSFSD---------QSTFYAQVVGHD 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~--~~~v~~~~---------g~~~~~~v~~~d 230 (359)
..|.+|.|....... ...|+|.+|+++ ||||+|||+.+.. .+.|.+.. ...+...-+..+
T Consensus 11 ~~Pw~v~l~~~~~~~--------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h 81 (221)
T 1fuj_A 11 SRPYMASLQMRGNPG--------SHFCGGTLIHPS-FVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLN 81 (221)
T ss_dssp SCTTEEEEEETTBTT--------CCCEEEEEEETT-EEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred CcCCEEEEEEecCCC--------CEEEEEEEecCC-EEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeC
Confidence 457888886532111 236999999987 9999999997643 57777642 223333333332
Q ss_pred ------CCCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccCCcccc
Q 018198 231 ------QVNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIPGRLIQ 295 (359)
Q Consensus 231 ------~~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~~~~~~ 295 (359)
..+|||||+++.+.. .+.++.|.... .+..|+.+++.||+.... ..+....+..+ ......
T Consensus 82 ~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~--- 157 (221)
T 1fuj_A 82 NYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCRP--- 157 (221)
T ss_dssp CCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCCT---
T ss_pred CCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecCC---
Confidence 346999999987643 46777776443 346899999999975321 22333333333 222211
Q ss_pred cEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHh
Q 018198 296 GVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 296 ~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~ 353 (359)
..++.. ...|.|+|||||+. +|.++||.++...+. ...-+.+..+...++|+++.++
T Consensus 158 ~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i~ 221 (221)
T 1fuj_A 158 HNICTFVPRRKAGICFGDSGGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR 221 (221)
T ss_dssp TEEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred ceeeeccCCCCCCCCCCCCCCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHhC
Confidence 245542 35789999999995 789999999943111 1224567788888888887653
No 44
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.59 E-value=5.6e-14 Score=124.90 Aligned_cols=179 Identities=20% Similarity=0.235 Sum_probs=117.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC---------cEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ---------STFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g---------~~~~~~v~~~d~- 231 (359)
..|..|.|.... ....|+|.+|+++ ||||+|||+.....+.|++... ..+..+.+..++
T Consensus 11 ~~Pw~v~l~~~~----------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (228)
T 1fxy_A 11 EVPWQALLINEE----------NEGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNR 79 (228)
T ss_dssp SCTTEEEEECTT----------SCEEEEEEECSSS-EEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTT
T ss_pred CcCcEEEEEcCC----------CCeeEEEEEeeCC-EEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCC
Confidence 357777775321 1237999999987 9999999997666677776421 223444444443
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeeccc-----CC
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDREI-----PG 291 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~-----~~ 291 (359)
.+|||||+++.+.. .+.|+.|.. .....|+.+++.||.... ...+....+..+.... ..
T Consensus 80 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 158 (228)
T 1fxy_A 80 FTKETYDFDIAVLRLKTPITFRMNVAPASLPT-APPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPG 158 (228)
T ss_dssp CBTTTTBTCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTT
T ss_pred CCCCCCcCcEEEEEECCcccCCCceeccCCCC-CCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCC
Confidence 46999999987643 467777854 445789999999997532 1223333333332211 11
Q ss_pred cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 292 RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 292 ~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
.....+++.. ...|.|+|||||+ .+++++||++++..-. ...-+.+.-+...++|+++.++
T Consensus 159 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 159 KITSNMFCVGFLEGGKDSCQGDSGGPVV-CNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp TCCTTEEEESCTTCSCBCCTTCTTCEEE-ETTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCEEEeccCCCCCccccCccccceE-ECCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 2223566663 3578999999999 4789999999986221 1234667788888888888765
No 45
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.59 E-value=7.3e-14 Score=124.03 Aligned_cols=178 Identities=20% Similarity=0.201 Sum_probs=117.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|... . ...|+|.+|+++ ||||+|||+.+...+.|.+.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~~----~-------~~~CgGtLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~ 78 (226)
T 1azz_A 11 SWPHQAALFID----D-------MYFCGGSLISPE-WILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHEN 78 (226)
T ss_dssp SSTTEEEEEET----T-------TEEEEEEEEETT-EEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTT
T ss_pred CcCCEEEEEEC----C-------cEEEEEEEecCC-EEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCC
Confidence 45788888651 1 237999999987 999999999887778888742 1233333333443
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeecccC----Cc
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS------FTCTTGVISALDREIP----GR 292 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~~~~~----~~ 292 (359)
.+|||||+++.+.. .+.++.|.... ...|+.+++.||..... ..+....+..+....+ +.
T Consensus 79 y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~ 157 (226)
T 1azz_A 79 YNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGI 157 (226)
T ss_dssp CBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHSC
T ss_pred CCCCCCCCceEEEEECCccccCCCcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhCc
Confidence 46999999987643 46777786443 47899999999975322 2233333333321111 11
Q ss_pred ccccEEEEc----ccCCCCCccceeecCCCeEEEEEeeecC-CC-cceeEEEEehHHHHHHHHHHHh
Q 018198 293 LIQGVIQID----ASVNLGNSGGPLLDSSGSLIGVNTFITS-GA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 293 ~~~~~i~~~----~~~~~G~SGgPl~~~~G~viGi~~~~~~-~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
....+++.. ...|.|+|||||+ .+|.++||.+++.. +. ...-+.+..+...++|+++.++
T Consensus 158 ~~~~~~Ca~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~~ 223 (226)
T 1azz_A 158 VTDGNICIDSTGGKGTCNGDSGGPLN-YNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQTG 223 (226)
T ss_dssp CCTTEEEECCTTTCBCCTTCTTCEEE-ETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHHC
T ss_pred CCCceEeecCCCCCccCCCCCCcceE-ECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHhC
Confidence 223456653 3578999999999 58899999999862 22 1223567778888888888764
No 46
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.59 E-value=7.6e-14 Score=124.14 Aligned_cols=180 Identities=16% Similarity=0.196 Sum_probs=119.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC--CCeEEEEecC------CcEEEEEEEEEc---
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG--ASTVKVSFSD------QSTFYAQVVGHD--- 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~--~~~~~v~~~~------g~~~~~~v~~~d--- 230 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+ ...+.|.+.. +..+..+-+..+
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~ 78 (235)
T 3h7t_A 11 KEPWAVGVLVDE-----------KPFCGGSILTAN-FVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYH 78 (235)
T ss_dssp TSTTEEEEEETT-----------SCCEEEEESSSS-EEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCB
T ss_pred CCCcEEEEecCC-----------CceEeEEEeeCC-EEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecC
Confidence 457888887521 236999999987 99999999954 3467777743 233444333322
Q ss_pred ---CCCCEEEEEEcCCCC----CccceEecCCC-CCCCCCEEEEEecCCCC------CCceeEeEEeeeecccC-----C
Q 018198 231 ---QVNDLAVLHIDAPNH----ELRPIHVSVSA-DLRVGKKIYAIGHPLGW------SFTCTTGVISALDREIP-----G 291 (359)
Q Consensus 231 ---~~~DlAll~v~~~~~----~~~~~~l~~~~-~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~~-----~ 291 (359)
..+|||||+++.+.. .+.++.|.... .+..|+.+++.||+... ...+....+..+....+ .
T Consensus 79 ~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 158 (235)
T 3h7t_A 79 PLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQ 158 (235)
T ss_dssp TTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHT
T ss_pred CCCCCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhh
Confidence 346999999987543 46677775433 26789999999997532 22333444433332111 1
Q ss_pred -----cccccEEEE-----cccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 292 -----RLIQGVIQI-----DASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 292 -----~~~~~~i~~-----~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
.....+++. ....|.|+|||||+. +|+++||.+++..-....-+.+..+...+.|+++.++.
T Consensus 159 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~ 230 (235)
T 3h7t_A 159 IEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQ-NGTLVGVASYISSMPSEFPSVFLRVGYYVLDIKDIISG 230 (235)
T ss_dssp TTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEE-TTEEEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHTT
T ss_pred cccCccccCCeEecCCCCCCCccccCCCCCceee-CCeEEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHhC
Confidence 122356776 345789999999995 88999999998632212346678888899999887764
No 47
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.59 E-value=1.2e-13 Score=122.50 Aligned_cols=178 Identities=17% Similarity=0.207 Sum_probs=114.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC--eEEEEecC---------CcEEEEEEEEEc
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS--TVKVSFSD---------QSTFYAQVVGHD 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~--~~~v~~~~---------g~~~~~~v~~~d 230 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+.. .+.|.+.. ...+..+-+..+
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h 78 (228)
T 2xw9_A 11 ARPYMASVQLNG-----------AHLCGGVLVAEQ-WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPH 78 (228)
T ss_dssp SCTTEEEEEETT-----------EEEEEEEEEETT-EEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEEC
T ss_pred CCCcEEEEEECC-----------CeEEEEEEEeCC-EEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeC
Confidence 457788886421 237999999987 9999999996543 67777742 133444444444
Q ss_pred C-------CCCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC----
Q 018198 231 Q-------VNDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP---- 290 (359)
Q Consensus 231 ~-------~~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~---- 290 (359)
+ .+|||||+++.+.. .+.|+.|... ..+..|+.+++.||..... ..+....+..+....+
T Consensus 79 p~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 158 (228)
T 2xw9_A 79 PDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRT 158 (228)
T ss_dssp TTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTT
T ss_pred CCCCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCcc
Confidence 4 46999999987643 4566777543 3467899999999975321 2233332222221111
Q ss_pred ---CcccccEEEEc---ccCCCCCccceeecCCCeEEEEEeeecCCCc--ceeEEEEehHHHHHHHHHHH
Q 018198 291 ---GRLIQGVIQID---ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF--SGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 291 ---~~~~~~~i~~~---~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 352 (359)
......+++.. ...|.|+|||||+. +|.++||++++..+.. ..-+....+...++|+++.+
T Consensus 159 ~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 159 HHDGAITERLMCAESNRRDSCKGDAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp TTTTCCCTTEEEECCSSCBCCTTCTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred ccCCcccCCEEecCCCCCccCCCCCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 11223456653 35789999999995 7899999998762221 23466788888888888765
No 48
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.58 E-value=1.3e-13 Score=121.57 Aligned_cols=174 Identities=17% Similarity=0.229 Sum_probs=113.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC--CeEEEEecCC---------cEEEEEEEEEc
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA--STVKVSFSDQ---------STFYAQVVGHD 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~--~~~~v~~~~g---------~~~~~~v~~~d 230 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+. ..+.|++... ..+..+-+..+
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h 78 (218)
T 2z7f_E 11 AWPFMVSLQLRG-----------GHFCGATLIAPN-FVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFEN 78 (218)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEEEETT-EEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEES
T ss_pred ccCcEEEEEeCC-----------CcEEEEEEccCC-EEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEcc
Confidence 457888886421 237999999987 999999999764 3567776431 23444333333
Q ss_pred ------CCCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccCCcccc
Q 018198 231 ------QVNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIPGRLIQ 295 (359)
Q Consensus 231 ------~~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~~~~~~ 295 (359)
..+|||||+++.+.. .+.|+.|.... .+..|+.+++.||+.... ..+....+..+ ......
T Consensus 79 ~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~--- 154 (218)
T 2z7f_E 79 GYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR--- 154 (218)
T ss_dssp CCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT---
T ss_pred CCCCCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc---
Confidence 346999999987543 46677776433 356899999999975322 22333333333 222211
Q ss_pred cEEEEc-----ccCCCCCccceeecCCCeEEEEEee--ecCCCcceeEEEEehHHHHHHHHHHH
Q 018198 296 GVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTF--ITSGAFSGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 296 ~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~--~~~~~~~~~~~aip~~~i~~~l~~l~ 352 (359)
..++.. ...|.|+|||||+. +|.++||.++ +.-+....-+....+...++|+++.+
T Consensus 155 ~~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 155 SNVCTLVRGRQAGVCFGDSGSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp TSEEEECTTSCCBCCTTCTTCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred ceeeeccCCCCCeeCCCcCCCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 134442 45789999999994 7899999999 42111112366788888888888765
No 49
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.58 E-value=1.8e-13 Score=121.14 Aligned_cols=177 Identities=15% Similarity=0.135 Sum_probs=114.6
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
-.|.+|.|... + ...|+|.+|+++ ||||+|||+... +.|.+.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~---~--------~~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 76 (223)
T 1lo6_A 11 SHPYQAALYTS---G--------HLLCGGVLIHPL-WVLTAAHCKKPN--LQVFLGKHNLRQRESSQEQSSVVRAVIHPD 76 (223)
T ss_dssp SCTTEEEEEET---T--------EEEEEEEEEETT-EEEECGGGCCTT--CEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCCCEEEEecC---C--------CEEEEeEEecCC-EEEECccCCCCC--eEEEEcceecCCCCCCcEEEEEEEEEECCC
Confidence 35778888531 1 237999999987 999999999743 4455421 2334444344443
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC----CCceeEeEEeeeecc-----cCCcc
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW----SFTCTTGVISALDRE-----IPGRL 293 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~----~~~~~~G~vs~~~~~-----~~~~~ 293 (359)
.+|||||+++.+.. .+.|+.|.. .....|+.+++.||.... ...+....+..+... .....
T Consensus 77 y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~ 155 (223)
T 1lo6_A 77 YDAASHDQDIMLLRLARPAKLSELIQPLPLER-DCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQI 155 (223)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCCBCC-CTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTC
T ss_pred CCCCCCcCeEEEEEECCcccCCCceeecccCC-CCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCC
Confidence 46999999987643 466778854 344789999999997542 122333333333221 11122
Q ss_pred cccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHhc
Q 018198 294 IQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 294 ~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
...+++.. ...|.|+|||||+. +|+++||++++..+. ...-+....+...++|+++.++.
T Consensus 156 ~~~~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 222 (223)
T 1lo6_A 156 TQNMLCAGDEKYGKDSCQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQA 222 (223)
T ss_dssp CTTEEEEECTTTCCBCCTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC-
T ss_pred CCCeEEeecCCCCCeeccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhcc
Confidence 23567763 35789999999995 789999999984221 12346678888899999887653
No 50
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.58 E-value=1.6e-13 Score=121.50 Aligned_cols=175 Identities=17% Similarity=0.209 Sum_probs=114.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|..|.|.. . ...|+|.+|+++ ||||+|||+.. .+.|++.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~-----~-------~~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 75 (222)
T 1hj8_A 11 SQPHQVSLNS-----G-------YHFCGGSLVNEN-WVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPN 75 (222)
T ss_dssp SCTTEEEEES-----S-------SEEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCEEEEEEc-----C-------CcEEEeEEecCC-EEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCC
Confidence 3577888752 1 137999999987 99999999974 34455422 2334444444444
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeecc-----cCCc
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDRE-----IPGR 292 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~-----~~~~ 292 (359)
.+|||||+++.+.. .+.|+.|.. ..+..|+.+++.||+.... ..+....+..+... ....
T Consensus 76 y~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 154 (222)
T 1hj8_A 76 YSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGM 154 (222)
T ss_dssp CBTTTTBSCCEEEEESSCCCCSSSCCCCBCCS-SCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTC
T ss_pred CCCCCCCCcEEEEEECCcccCCCceeccCCCC-CCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCC
Confidence 46999999987643 467788864 3467899999999975421 22333333333211 1111
Q ss_pred ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHHh
Q 018198 293 LIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 293 ~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~~ 353 (359)
....+++.. ...|.|+|||||+. +|+++||.+++..-.. ..-+.+..+...++|+++.++
T Consensus 155 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 155 ITNAMFCAGYLEGGKDSCQGDSGGPVVC-NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp CCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCeEEeccCCCCCccCCCCcccceEE-CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHhh
Confidence 223566663 35789999999995 7899999999862211 234667778888888887664
No 51
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.58 E-value=1.4e-13 Score=121.82 Aligned_cols=175 Identities=17% Similarity=0.195 Sum_probs=114.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|. . . ...|+|.+|+++ ||||+|||+. ..+.|++.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~--~--~--------~~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 75 (223)
T 3mfj_A 11 TVPYQVSLN--S--G--------YHFCGGSLINSQ-WVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPS 75 (223)
T ss_dssp SSTTEEEEE--S--S--------SEEEEEEEEETT-EEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTT
T ss_pred cCCEEEEEE--c--C--------CeEEEEEEecCC-EEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCC
Confidence 457788883 1 1 136999999987 9999999995 345565532 2334444444443
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeecc-----cCC
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDRE-----IPG 291 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~-----~~~ 291 (359)
.+|||||+++.+.. .+.|+.|... ....|+.+++.||+... ...+....+..+... ...
T Consensus 76 y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 154 (223)
T 3mfj_A 76 YNSNTLNNDIMLIKLKSAASLNSRVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPG 154 (223)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTT
T ss_pred CCCCCCCCCEEEEEeCCCcccCCcEeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcC
Confidence 46999999987643 4677888643 45789999999997542 122333333333221 111
Q ss_pred cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 292 RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 292 ~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
.....+++.. ...|.|+|||||+. +|+++||++++..-. ...-+....+...++|+++.++
T Consensus 155 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 155 QITSNMFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp TCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred cCCCCEEEccCCCCCCCcCCCCcccceEE-CCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 1223567764 25789999999995 789999999985221 1234667888888888887664
No 52
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.58 E-value=2.7e-13 Score=121.49 Aligned_cols=184 Identities=20% Similarity=0.204 Sum_probs=118.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|...... . ....|+|.+|+++ ||||+|||+.....+.|.+.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~~~-~------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 82 (241)
T 1bru_P 11 SWPWQVSLQYDSSG-Q------WRHTCGGTLVDQS-WVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQD 82 (241)
T ss_dssp SSTTEEEEEEEETT-E------EEEEEEEEEEETT-EEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTT
T ss_pred CcCcEEEEEEecCC-c------eeeEEEeEEeeCC-EEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCC
Confidence 45788888753211 0 0237999999987 999999999855677787742 2334444444443
Q ss_pred ------C--CCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC----
Q 018198 232 ------V--NDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP---- 290 (359)
Q Consensus 232 ------~--~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~---- 290 (359)
. +|||||+++.+.. .+.|+.|.... .+..|+.+++.||.... ...+....+..+....+
T Consensus 83 y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~ 162 (241)
T 1bru_P 83 WNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPG 162 (241)
T ss_dssp CCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTT
T ss_pred CCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCccc
Confidence 2 7999999987643 46677776443 35689999999997532 12333333333322111
Q ss_pred --C-cccccEEEEc----ccCCCCCccceeecC--CC--eEEEEEeeecC-CCc--ceeEEEEehHHHHHHHHHHHh
Q 018198 291 --G-RLIQGVIQID----ASVNLGNSGGPLLDS--SG--SLIGVNTFITS-GAF--SGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 291 --~-~~~~~~i~~~----~~~~~G~SGgPl~~~--~G--~viGi~~~~~~-~~~--~~~~~aip~~~i~~~l~~l~~ 353 (359)
+ .....+++.. ...|.|+|||||+-. +| .++||++++.. +.. ..-+.+..+...++|+++.++
T Consensus 163 ~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 239 (241)
T 1bru_P 163 WWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA 239 (241)
T ss_dssp TTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred ccCCcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 1 1123567764 357899999999953 46 89999999852 211 224567778888888887765
No 53
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.57 E-value=1.9e-13 Score=120.86 Aligned_cols=176 Identities=16% Similarity=0.188 Sum_probs=115.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
-.|.+|.|.. . ...|+|.+|+++ ||||+|||+... +.|++.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~----~--------~~~C~GtLI~~~-~VLTAAhC~~~~--~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~ 75 (223)
T 4i8h_A 11 TVPYQVSLNS----G--------YHFCGGSLINSQ-WVVSAAHCYKSG--IQVRLGEDNINVVEGNEQFISASKSIVHPS 75 (223)
T ss_dssp SSTTEEEEES----S--------SEEEEEEECSSS-EEEECGGGCCSS--CEEEESCSSTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCeEEEecC----C--------CcEEEEEEEcCC-EEEecHHhCCCC--cEEEEccccccccCCCcEEEEEeEEEECcC
Confidence 3567787751 1 236999999987 999999999754 3444421 2234444444554
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeccc-----CC
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS------FTCTTGVISALDREI-----PG 291 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~~~~-----~~ 291 (359)
.+|||||+++.+.. .+.++.|.. .....|+.+++.||..... ..+....+..+.... ..
T Consensus 76 y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 154 (223)
T 4i8h_A 76 YNSNTLNNDIMLIKLKSAASLNSRVASISLPT-SCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPG 154 (223)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCBCCS-SCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTT
T ss_pred CCCCCCcCCEEEEEECCcCcCCCceeceECCC-CCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCC
Confidence 46999999987543 467778864 3467899999999975322 123333333332211 11
Q ss_pred cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHhc
Q 018198 292 RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 292 ~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
.....+++.. ...|.|+|||||+. +++++||.+++..-. ...-+.+..+...++|+++.++.
T Consensus 155 ~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~~ 222 (223)
T 4i8h_A 155 QITSNMFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIAS 222 (223)
T ss_dssp TCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CCCCCeEeccCCCCCCccCCCCCCCcEEE-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 2233566663 35788999999994 689999999986322 12246678888899998887753
No 54
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.57 E-value=2.4e-13 Score=121.06 Aligned_cols=181 Identities=12% Similarity=0.084 Sum_probs=115.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC--------CcEE--EEEEEEEcC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD--------QSTF--YAQVVGHDQ 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~--------g~~~--~~~v~~~d~ 231 (359)
..|.+|.|..... ....|+|.+|+++ ||||+|||+... ..|.+.. .... ....+..++
T Consensus 11 ~~Pw~v~l~~~~~---------~~~~CgGtLI~~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~ 78 (234)
T 3s9c_A 11 EHPFLVALYTSAS---------STIHCAGALINRE-WVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLN 78 (234)
T ss_dssp SCTTEEEEEETTE---------EEEEEEEEEEETT-EEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSS
T ss_pred CCCeEEEEEECCC---------CcEEEeeEEeeCC-EEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCC
Confidence 4577888864311 1236999999987 999999999754 4444421 1111 122222232
Q ss_pred -------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC----CCceeEeEEeeeecccCC------
Q 018198 232 -------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW----SFTCTTGVISALDREIPG------ 291 (359)
Q Consensus 232 -------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~----~~~~~~G~vs~~~~~~~~------ 291 (359)
.+|||||+++.+.. .+.++.|.. .....|+.+++.||+... ...+....+..+......
T Consensus 79 ~~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 157 (234)
T 3s9c_A 79 TKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPS-RSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWV 157 (234)
T ss_dssp CSSTTCGGGCCEEEEESSCCCCBTTBCCCBCCS-SCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTS
T ss_pred CCCCCCCcCceEEEEECCccccCCcccccccCC-CCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCC
Confidence 35999999987543 567788864 445679999999997532 222333333333322221
Q ss_pred cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCc--ceeEEEEehHHHHHHHHHHHhcCc
Q 018198 292 RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF--SGIGFALPIDTVRGIVDQLVKFSR 356 (359)
Q Consensus 292 ~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~--~~~~~aip~~~i~~~l~~l~~~g~ 356 (359)
.....+++.. ...|.|+|||||+ .+++++||.+++..... ..-+.+..+...++|+++.++..+
T Consensus 158 ~~~~~~~Ca~~~~~~~~~C~GDSGgPl~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~~ 228 (234)
T 3s9c_A 158 PADSRTLCAGILKGGRDTCHGDSGGPLI-CNGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNR 228 (234)
T ss_dssp CTTSSEEEEECTTSSCBCCTTCTTCEEE-ETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTCS
T ss_pred CCCcceEEeecCCCCCccCCCCCCCeEE-EeCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCCC
Confidence 1123456663 3578899999999 47899999999864221 234677888899999998887654
No 55
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.57 E-value=1.9e-13 Score=121.12 Aligned_cols=176 Identities=15% Similarity=0.164 Sum_probs=114.6
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC----------CcEEEEEEEEEcC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD----------QSTFYAQVVGHDQ 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~----------g~~~~~~v~~~d~ 231 (359)
..|.+|.|... + ...|+|.+|+++ ||||+|||+.+. ..|.+.. ...+..+.+..++
T Consensus 11 ~~Pw~v~l~~~----~-------~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp 76 (223)
T 2bdg_A 11 SQPWQAALVME----N-------ELFCSGVLVHPQ-WVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHP 76 (223)
T ss_dssp SSTTEEEEECS----S-------CEEEEEEEEETT-EEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECT
T ss_pred CCCcEEEEeeC----C-------CEEEEEEEecCC-EEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCC
Confidence 35778888641 1 237999999987 999999999754 4444421 1234444444443
Q ss_pred -------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC----CceeEeEEeeeeccc-----CCc
Q 018198 232 -------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS----FTCTTGVISALDREI-----PGR 292 (359)
Q Consensus 232 -------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~----~~~~~G~vs~~~~~~-----~~~ 292 (359)
.+|||||+++.+.. .+.|+.|.. ..+..|+.+++.||+.... ..+....+..+.... ...
T Consensus 77 ~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 155 (223)
T 2bdg_A 77 EYNRPLLANDLMLIKLDESVSESDTIRSISIAS-QCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPL 155 (223)
T ss_dssp TTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCS-SCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTT
T ss_pred CCCCCCCcCcEEEEEECCcccCCCceecccCCC-CCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCC
Confidence 46999999987643 466777754 4457899999999985432 223333333332211 111
Q ss_pred ccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHh
Q 018198 293 LIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 293 ~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~ 353 (359)
....+++.. ...|.|+|||||+. ++.++||.+++..+. ...-+....+...++|+++.++
T Consensus 156 ~~~~~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 222 (223)
T 2bdg_A 156 YHPSMFCAGGGQDQKDSCNGDSGGPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQ 222 (223)
T ss_dssp CCTTEEEECCSTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHHH
T ss_pred CCCCeEeccCCCCCCCcCCCCCCchheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 223567764 25789999999994 689999999985221 1234667888888888887654
No 56
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.57 E-value=2.6e-14 Score=125.79 Aligned_cols=160 Identities=18% Similarity=0.120 Sum_probs=102.1
Q ss_pred ceEEEEEEeCCCEEEecccccCCC--CeE----EEEecC------CcEEEEEEEEEc--------CCCCEEEEEEcCCCC
Q 018198 186 GSGAGFLWDQDGHIVTNYHVICGA--STV----KVSFSD------QSTFYAQVVGHD--------QVNDLAVLHIDAPNH 245 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv~~~--~~~----~v~~~~------g~~~~~~v~~~d--------~~~DlAll~v~~~~~ 245 (359)
..|+|++|+++ ||||+|||+.+. ..+ .|.+.. +..+..+-+..+ ..+|||||+++.+..
T Consensus 30 ~~CgGtLIs~~-~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~~ 108 (215)
T 1p3c_A 30 SSCTGTLIAPN-KILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNIG 108 (215)
T ss_dssp CEEEEEEEETT-EEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSCHH
T ss_pred ceEEEEEEeCC-EEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCCCc
Confidence 37999999987 999999999543 344 666632 223444444433 356999999997421
Q ss_pred -CccceEecCCCCCCCCCEEEEEecCCCC----CCceeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeE
Q 018198 246 -ELRPIHVSVSADLRVGKKIYAIGHPLGW----SFTCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSL 320 (359)
Q Consensus 246 -~~~~~~l~~~~~~~~G~~v~~iG~p~~~----~~~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~v 320 (359)
.+.++.|... ....|+.++++||+... ........+..+....+ .....+...|.|+|||||+..+|.+
T Consensus 109 ~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c-----~~~~~~~~~C~GDSGgPl~~~~g~l 182 (215)
T 1p3c_A 109 NTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDT-----NLAYYTIDTFSGNSGSAMLDQNQQI 182 (215)
T ss_dssp HHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECS-----SEEEECCCCCTTCTTCEEECTTSCE
T ss_pred ccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCcccc-----hheeeccccCCCCCCCeeEccCCeE
Confidence 3567777543 45789999999998421 11112222221211111 1122356789999999999778999
Q ss_pred EEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 321 IGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 321 iGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
+||++++.... ..-+....+...+.++++...
T Consensus 183 vGi~S~g~~c~-~~p~v~t~v~~~~~WI~~~~~ 214 (215)
T 1p3c_A 183 VGVHNAGYSNG-TINGGPKATAAFVEFINYAKA 214 (215)
T ss_dssp EEECCEEEGGG-TEEEEEBCCHHHHHHHHHHHT
T ss_pred EEEEecccCCC-ccCceeEechHHHHHHHHHhc
Confidence 99999886322 333445567788888877543
No 57
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.57 E-value=2.6e-15 Score=127.24 Aligned_cols=118 Identities=24% Similarity=0.285 Sum_probs=80.9
Q ss_pred cceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEE
Q 018198 185 RGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKI 264 (359)
Q Consensus 185 ~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v 264 (359)
.+.|+||.|+.+++||||+||+.+.+. +...++.++. ..+++..|+|++++......+|.++++... ..|...
T Consensus 29 ~GsGt~F~i~g~~~VvTA~HVVg~~~~--vVt~~g~r~~---~~f~~~~D~All~i~~~~g~~P~lKlA~~~--~~G~a~ 101 (213)
T 3fan_A 29 MGSGGVFTIDGKIKCVTAAHVLTGNSA--RVSGVGFNQM---LDFDVKGDFAIADCPNWQGVAPKAQFCEDG--WTGRAY 101 (213)
T ss_dssp EEEEEEEEETTEEEEEEEGGGSBTTEE--EEEETTEEEE---EECEEETTEEEEECTTCCSCCCBCCBCCTT--CCEEEE
T ss_pred CCceEEEEECCcEEEEEeccEeCCCCE--EEecCCcEEE---EEecCCCcEEEEEccCcCCCCCcceeeeee--ccCceE
Confidence 468999999877799999999999887 4445666664 366999999999997645568888886322 233333
Q ss_pred EEEecCCCCCCceeEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeec
Q 018198 265 YAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 265 ~~iG~p~~~~~~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+..-+ ....|.+.. + ..+.+ ..+|||||||+|.+|+||||++...
T Consensus 102 ~~~~~------gv~~G~i~~------~----~al~~---T~pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 102 WLTSS------GVEPGVIGN------G----FAFCF---TACGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp EEETT------EEEEEEEET------T----EEEES---SCCCSTTCEEEETTSCEEEEEEC--
T ss_pred EEEcc------Ccccccccc------C----CEEEe---cCCCCCCCccCCCCCcEEEEEeccC
Confidence 33322 123333321 0 11222 2689999999999999999999875
No 58
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.57 E-value=6.1e-14 Score=125.32 Aligned_cols=176 Identities=16% Similarity=0.182 Sum_probs=112.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.. .+.|.+.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 76 (237)
T 1gvz_A 11 SKPWQVAVYHQG-----------HFQCGGVLVHPQ-WVLTAAHCMSD--DYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQ 76 (237)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred CCCeEEEEeeCC-----------ceEEEeEEeeCC-EEEEcHHhCCC--CCeEEEeecccccCCCCceEEEeeeEecCCc
Confidence 357788886321 136999999987 99999999973 44555522 2333344444443
Q ss_pred -----------------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC-C-C----ceeEeEEeee
Q 018198 232 -----------------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW-S-F----TCTTGVISAL 285 (359)
Q Consensus 232 -----------------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~-~-~----~~~~G~vs~~ 285 (359)
.+|||||+++.+.. .+.++.|.. .....|+.+++.||.... . . .+....+..+
T Consensus 77 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~ 155 (237)
T 1gvz_A 77 FDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPT-QEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQ 155 (237)
T ss_dssp SCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEE
T ss_pred cCcccccccccccccccCCceEEEEeCCCcccCCcEeeeECCC-CCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEe
Confidence 67999999987643 467778864 346789999999997542 1 1 2222333333
Q ss_pred ecccCC-----cccccEEEEcc-----cCCCCCccceeecCCCeEEEEEeeecCCCc--ceeEEEEehHHHHHHHHHHHh
Q 018198 286 DREIPG-----RLIQGVIQIDA-----SVNLGNSGGPLLDSSGSLIGVNTFITSGAF--SGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 286 ~~~~~~-----~~~~~~i~~~~-----~~~~G~SGgPl~~~~G~viGi~~~~~~~~~--~~~~~aip~~~i~~~l~~l~~ 353 (359)
....+. .....+++... ..|.|+|||||+. +|.++||.+++..+.. ..-+....+...++|+++.++
T Consensus 156 ~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1gvz_A 156 SNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234 (237)
T ss_dssp CGGGGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHH
T ss_pred ChhHhhhhhhhcCCCceEEEeeCCCCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 222211 11234566532 4688999999994 7899999999852221 112356677778888877654
No 59
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.57 E-value=1.5e-13 Score=122.61 Aligned_cols=182 Identities=14% Similarity=0.118 Sum_probs=115.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC------cE--EEEEEEEEcC--
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ------ST--FYAQVVGHDQ-- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g------~~--~~~~v~~~d~-- 231 (359)
-.|.+|.|.... . ....|+|.+|+++ ||||+|||+.....+.+...+. .. ...+.+..++
T Consensus 11 ~~Pw~v~l~~~~--~-------~~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~ 80 (238)
T 4e7n_A 11 EHRFLVALYTSR--S-------RTLFCGGTLINQE-WVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSK 80 (238)
T ss_dssp SCTTEEEEECTT--T-------CCEEEEEEECSSS-EEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTC
T ss_pred CcCcEEEEEECC--C-------CCEEEEEEEecCC-EEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCC
Confidence 457888886421 0 1237999999987 9999999997654444333221 11 1222222222
Q ss_pred -----CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeecccCC------
Q 018198 232 -----VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDREIPG------ 291 (359)
Q Consensus 232 -----~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~~~------ 291 (359)
.+|||||+++.+.. .+.++.|.. .....|+.+++.||+... ...+....+..+....+.
T Consensus 81 ~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 159 (238)
T 4e7n_A 81 NYTLWDKDIMLIRLDSPVKNSKHIAPFSLPS-SPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEF 159 (238)
T ss_dssp CCCSSSCCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGG
T ss_pred CCCCCCCcEEEEEeCCCccCCCceeeeeCCC-CCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccc
Confidence 46999999987543 466777754 445679999999997532 122333334333322221
Q ss_pred --cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHhcC
Q 018198 292 --RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVKFS 355 (359)
Q Consensus 292 --~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~~g 355 (359)
.....+++.. ...|.|+|||||+ .+++++||.+++.... ...-+.+..+...+.|+++.++..
T Consensus 160 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 160 ELPATSRTLCAGILEGGKDTCKGDSGGPLI-CNGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp CCCSCCSEEEEECTTCSCBCCTTCTTCEEE-ETTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred cCCCCCCeEEeCCCCCCCccCCCCCCcceE-ECCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 1123456653 3578999999999 4789999999986411 123466778888999998887653
No 60
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.57 E-value=2.5e-13 Score=121.17 Aligned_cols=175 Identities=18% Similarity=0.201 Sum_probs=114.6
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
-.|..|.|.. . ..|+|.+|+++ ||||+|||+. ..+.|++.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~-----~--------~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 74 (235)
T 1ton_A 11 SQPWQVAVIN-----E--------YLCGGVLIDPS-WVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPD 74 (235)
T ss_dssp SCTTEEEEES-----S--------SEEEEEEEETT-EEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred CcCcEEEEcc-----C--------CeEEEEEecCC-EEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCC
Confidence 3577788753 1 26999999987 9999999996 344555532 1223333333332
Q ss_pred -----------------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC------CceeEeEEeee
Q 018198 232 -----------------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS------FTCTTGVISAL 285 (359)
Q Consensus 232 -----------------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~ 285 (359)
.+|||||+++.+.. .+.++.|.. ..+..|+.+++.||..... ..+....+..+
T Consensus 75 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~ 153 (235)
T 1ton_A 75 YIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPT-KEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLL 153 (235)
T ss_dssp CCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCC-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEE
T ss_pred CcccccccccccccCCCcCCEEEEEcCCccccCCcceeeeCCC-CCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEe
Confidence 35999999987643 467788864 4467899999999975421 22333444433
Q ss_pred ecccC-----CcccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCc--ceeEEEEehHHHHHHHHHHHh
Q 018198 286 DREIP-----GRLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF--SGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 286 ~~~~~-----~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~--~~~~~aip~~~i~~~l~~l~~ 353 (359)
....+ ......+++.. ...|.|+|||||+. +|.++||.+++..+.. ..-+....+...++|+++.++
T Consensus 154 ~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 154 SNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp CGGGCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CHHHHHHHhcCcCCCCeEeeccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 32222 11233566663 35789999999995 7899999999842221 234667888889999888765
Q ss_pred c
Q 018198 354 F 354 (359)
Q Consensus 354 ~ 354 (359)
.
T Consensus 233 ~ 233 (235)
T 1ton_A 233 E 233 (235)
T ss_dssp H
T ss_pred c
Confidence 3
No 61
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.57 E-value=1.9e-13 Score=122.05 Aligned_cols=176 Identities=16% Similarity=0.154 Sum_probs=113.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+ .+.|.+.. +.....+-+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~ 76 (237)
T 1ao5_A 11 SQPWQVAVYYQK-----------EHICGGVLLDRN-WVLTAAHCYVD--QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPG 76 (237)
T ss_dssp SCTTEEEEEETT-----------EEEEEEEEEETT-EEEECTTCCCS--SCEEEESCCBSSSCCSSCEECCEEEEEECTT
T ss_pred CcCCEEEEeeCC-----------CeEEEEEEeeCC-EEEECHHHCCC--CCEEEecccccccCCCCcEEEEEEEEEcCCC
Confidence 457788886421 237999999987 99999999963 44555532 1222233333332
Q ss_pred -----------------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC------CceeEeEEeee
Q 018198 232 -----------------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS------FTCTTGVISAL 285 (359)
Q Consensus 232 -----------------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~ 285 (359)
.+|||||+++.+.. .+.|+.|.. .....|+.+++.||..... ..+....+..+
T Consensus 77 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~ 155 (237)
T 1ao5_A 77 FNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPT-KEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLL 155 (237)
T ss_dssp SCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCC-SCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEE
T ss_pred cCcccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCC-CCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEec
Confidence 67999999987643 467788864 4567899999999975321 22333333333
Q ss_pred ecc-----cCCcccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHh
Q 018198 286 DRE-----IPGRLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 286 ~~~-----~~~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~ 353 (359)
... +.......+++.. ...|.|+|||||+. +|.++||.+++..+. ...-+.+..+...++|+++.++
T Consensus 156 ~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1ao5_A 156 PNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM 234 (237)
T ss_dssp CHHHHHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred ChhHhhhhhcccCCCCEEEEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 211 1111223566664 35789999999995 789999999983221 1224667888888888887765
No 62
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.57 E-value=2.6e-13 Score=121.50 Aligned_cols=184 Identities=17% Similarity=0.203 Sum_probs=117.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|.... ... ....|+|.+|+++ ||||+|||+.+...+.|.+.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~--~~~-----~~~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 82 (240)
T 1gvk_B 11 SWPSQISLQYRS--GSS-----WAHTCGGTLIRQN-WVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPY 82 (240)
T ss_dssp SCTTEEEEEEEE--TTE-----EEEEEEEEEEETT-EEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTT
T ss_pred CcCEEEEEEecC--CCc-----cCceEEEEEeeCC-EEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCC
Confidence 457788886321 110 0237999999987 999999999887778888743 1234444444443
Q ss_pred --------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC----
Q 018198 232 --------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP---- 290 (359)
Q Consensus 232 --------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~---- 290 (359)
.+|||||+++.+.. .+.++.|.... .+..|+.+++.||..... ..+....+..+....+
T Consensus 83 y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 162 (240)
T 1gvk_B 83 WNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSS 162 (240)
T ss_dssp CCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTT
T ss_pred CCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhcccc
Confidence 56999999987643 45667775433 356899999999975321 1223332222221111
Q ss_pred --C-cccccEEEEc----ccCCCCCccceeecC-CC--eEEEEEeeecC-CC--cceeEEEEehHHHHHHHHHHHh
Q 018198 291 --G-RLIQGVIQID----ASVNLGNSGGPLLDS-SG--SLIGVNTFITS-GA--FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 291 --~-~~~~~~i~~~----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~-~~--~~~~~~aip~~~i~~~l~~l~~ 353 (359)
+ .....+++.. ...|.|+|||||+-. +| .++||.+++.. +. ...-+.+..+...++++++.++
T Consensus 163 ~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 163 YWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp TTGGGCCTTEEEECCSSSCBCCTTCTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred ccCccCCcceEeecCCCCCcccCCCCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 1 1123566664 357899999999853 67 89999999742 21 1234567778888888887665
No 63
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.56 E-value=1.9e-13 Score=121.65 Aligned_cols=180 Identities=16% Similarity=0.106 Sum_probs=113.7
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC-------cE-EEEEEEEEcC--
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ-------ST-FYAQVVGHDQ-- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g-------~~-~~~~v~~~d~-- 231 (359)
-.|.+|.|.... ...|+|.+|+++ ||||+|||+.....+.+...+. .. ...+.+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~ 78 (234)
T 3s69_A 11 EHRSLVAFFNST-----------GFFCSGTLINEE-WVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKK 78 (234)
T ss_dssp SCTTEEEEECSS-----------CEEEEEEEEETT-EEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCC
T ss_pred CCceEEEEeeCC-----------CeEEeEEEeeCC-EEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCcc
Confidence 357788886421 237999999987 9999999997654444332211 11 1223333232
Q ss_pred -----CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeecccC------C
Q 018198 232 -----VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS------FTCTTGVISALDREIP------G 291 (359)
Q Consensus 232 -----~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~~~~~------~ 291 (359)
.+|||||+++.+.. .+.++.|.. .....|+.+++.||..... .......+..+..... .
T Consensus 79 ~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 157 (234)
T 3s69_A 79 NDEVLDKDIMLIKLDSRVSNSEHIVPLSLPS-SPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPEL 157 (234)
T ss_dssp TTCTTSSCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTC
T ss_pred CCCCCcccEEEEeeCCcCCCCCcceeeecCC-CCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccc
Confidence 46999999987543 456777754 4456799999999975321 1223333333322111 1
Q ss_pred cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCc--ceeEEEEehHHHHHHHHHHHhcC
Q 018198 292 RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF--SGIGFALPIDTVRGIVDQLVKFS 355 (359)
Q Consensus 292 ~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~--~~~~~aip~~~i~~~l~~l~~~g 355 (359)
......++.. ...|.|+|||||+. +++++||.+++..... ..-+.+..+...++|+++.++..
T Consensus 158 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 158 LTEYRTLCAGILEGGKDTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp CTTSCEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred cCCcceEeccCCCCCCccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 1122456652 45789999999994 7899999999863221 23466788899999999887653
No 64
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.56 E-value=3e-13 Score=120.07 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=113.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|...... . ...|+|.+|+++ ||||+|||+.+ .+.|++.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~~~-~-------~~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (227)
T 1euf_A 11 SRPYMAFLLFKTSG-K-------SHICGGFLVRED-FVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPD 79 (227)
T ss_dssp SCTTEEEEEEESSS-S-------EEEEEEEEEETT-EEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CcCCEEEEEEeCCC-C-------ceEEEEEEeeCC-EEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCC
Confidence 45788888653211 0 236999999987 99999999975 45666532 2334444444444
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC-----C
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP-----G 291 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~-----~ 291 (359)
.+|||||+++.+.. .+.|+.|.... .+..|+.+++.||.... ...+....+..+....+ .
T Consensus 80 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~ 159 (227)
T 1euf_A 80 YNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKN 159 (227)
T ss_dssp CCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTT
T ss_pred CCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcC
Confidence 46999999987543 46677776432 35789999999997532 12233333333322111 1
Q ss_pred cccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 292 RLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 292 ~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
.....+++.. ...+.|+|||||+. +|.++||++++.. ....-+...-+...++|+++.++
T Consensus 160 ~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~-~~~l~Gi~S~gc~-~~~~p~vyt~V~~y~~WI~~~~~ 224 (227)
T 1euf_A 160 YIPFTQICAGDPSKRKNSFSGDSGGPLVC-NGVAQGIVSYGRN-DGTTPDVYTRISSFLSWIHSTMR 224 (227)
T ss_dssp CCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCT-TCCSCEEEEEGGGTHHHHHHHTC
T ss_pred cCCCcEEEccCCCCCCcccccCCCCceEE-CCEEEEEEEEeCC-CCCCCeEEEEHHHhHHHHHHHHh
Confidence 1223567663 23458999999994 7899999999732 21223566778888888877654
No 65
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.56 E-value=1.5e-13 Score=122.64 Aligned_cols=182 Identities=17% Similarity=0.177 Sum_probs=116.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|...... .. ...|+|.+|+++ ||||+|||+.+...+.|.+.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~~~-~~------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~ 82 (236)
T 1elt_A 11 SWPWQISLQYKSGS-SY------YHTCGGSLIRQG-WVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSG 82 (236)
T ss_dssp SSTTEEEEEEEETT-EE------EEEEEEEEEETT-EEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTT
T ss_pred CCCCEEEEEEecCC-ce------eeEEEEEEEeCC-EEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCC
Confidence 45788888753211 00 136999999987 999999999887778888743 1234444444443
Q ss_pred --------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC----
Q 018198 232 --------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP---- 290 (359)
Q Consensus 232 --------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~---- 290 (359)
.+|||||+++.+.. .+.++.|.... .+..|+.+++.||+.... ..+....+..+....+
T Consensus 83 y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 162 (236)
T 1elt_A 83 WNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSG 162 (236)
T ss_dssp CCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTT
T ss_pred CCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhcccc
Confidence 56999999987543 46677776433 356899999999985421 2233333322221111
Q ss_pred --C-cccccEEEEc---ccCCCCCccceeecC-CC--eEEEEEeeecC-CC--cceeEEEEehHHHHHHHHHH
Q 018198 291 --G-RLIQGVIQID---ASVNLGNSGGPLLDS-SG--SLIGVNTFITS-GA--FSGIGFALPIDTVRGIVDQL 351 (359)
Q Consensus 291 --~-~~~~~~i~~~---~~~~~G~SGgPl~~~-~G--~viGi~~~~~~-~~--~~~~~~aip~~~i~~~l~~l 351 (359)
+ .....+++.. ...|.|+|||||+-. +| .++||.+++.. +. ...-+.+..+...++++++.
T Consensus 163 ~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (236)
T 1elt_A 163 WWGSTVKTTMVCAGGGANSGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235 (236)
T ss_dssp TTGGGSCTTEEEECCSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred ccCCcCCcceEEecCCCCccCCCCCCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHhh
Confidence 1 1123456654 357899999999954 66 89999999741 22 12345677788888887764
No 66
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.56 E-value=3.8e-13 Score=120.10 Aligned_cols=183 Identities=17% Similarity=0.157 Sum_probs=118.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC--CeEEEEecC---------CcEEEEEEEEEc
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA--STVKVSFSD---------QSTFYAQVVGHD 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~--~~~~v~~~~---------g~~~~~~v~~~d 230 (359)
..|.+|.|.... . ....|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..+
T Consensus 11 ~~Pw~v~l~~~~--~-------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h 80 (238)
T 1ym0_A 11 EFPWQVSVRRKS--S-------DSHFCGGSIINDR-WVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVN 80 (238)
T ss_dssp SSTTEEEEEEGG--G-------TEEEEEEEEEETT-EEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEEC
T ss_pred ccCCEEEEEeCC--C-------CceEEEEEEeeCC-EEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEEC
Confidence 357888887532 0 1237999999987 999999999764 467777742 233444444444
Q ss_pred C-------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeecccC----
Q 018198 231 Q-------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDREIP---- 290 (359)
Q Consensus 231 ~-------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~~---- 290 (359)
+ .+|||||+++.+.. .+.|+.|........++.+++.||.... ...+....+..+....+
T Consensus 81 p~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 160 (238)
T 1ym0_A 81 ENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVY 160 (238)
T ss_dssp TTCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHC
T ss_pred CCCCCCCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhh
Confidence 3 46999999987543 4677777654333378999999997532 22233333333322111
Q ss_pred -C-cccccEEEEc-------ccCCCCCccceeecC--CC--eEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 291 -G-RLIQGVIQID-------ASVNLGNSGGPLLDS--SG--SLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 291 -~-~~~~~~i~~~-------~~~~~G~SGgPl~~~--~G--~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
. .....+++.. ...|.|+|||||+-. +| .++||.+++..-....-+.+..+...++|+++.++.
T Consensus 161 ~~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~ 237 (238)
T 1ym0_A 161 TSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFHAGWITDTITN 237 (238)
T ss_dssp TTSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSSSSSCEEEEEHHHHHHHHHHHHHC
T ss_pred cccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCCCCCCcEEEEHHHhHHHHHHHhcC
Confidence 1 1223566652 467899999999854 34 799999998632222346678888899999887653
No 67
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.56 E-value=3e-13 Score=120.57 Aligned_cols=178 Identities=19% Similarity=0.196 Sum_probs=112.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+ ....|++.. ...+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~ 77 (234)
T 1orf_A 11 SRPYMVLLSLDR-----------KTICAGALIAKD-WVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPC 77 (234)
T ss_dssp SSTTEEEEECSS-----------SCEEEEEEEETT-EEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTT
T ss_pred CCCeEEEEccCC-----------ceEEEEEEeeCC-EEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCC
Confidence 457788886421 237999999987 99999999975 345566532 1234444444443
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccCC--c--
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIPG--R-- 292 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~~--~-- 292 (359)
.+|||||+++.+.. .+.++.|.... .+..|+.+++.||.... ...+....+..+....+. .
T Consensus 78 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 157 (234)
T 1orf_A 78 YDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHY 157 (234)
T ss_dssp CCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTT
T ss_pred CCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCcccc
Confidence 46999999987543 45677776433 34789999999997532 123334444333321111 0
Q ss_pred -ccc----cEEEEc-----ccCCCCCccceeecCCCeEEEEEeeec-CCCc--ceeEEEEehH-HHHHHHHHHHh
Q 018198 293 -LIQ----GVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFIT-SGAF--SGIGFALPID-TVRGIVDQLVK 353 (359)
Q Consensus 293 -~~~----~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~-~~~~--~~~~~aip~~-~i~~~l~~l~~ 353 (359)
... .+++.. ...|.|+|||||+- +|.++||.+++. .+.. ..-+....+. ..++|+++.++
T Consensus 158 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~ 231 (234)
T 1orf_A 158 NFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK 231 (234)
T ss_dssp TTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred ccCCccCCCEEEecCCCCCCcCCCCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHH
Confidence 111 567764 35789999999994 789999999985 1211 1234556666 77788877654
No 68
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.56 E-value=8.7e-13 Score=118.03 Aligned_cols=182 Identities=13% Similarity=0.089 Sum_probs=119.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC--CeEEEEecC-----------CcEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA--STVKVSFSD-----------QSTFYAQVVG 228 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~--~~~~v~~~~-----------g~~~~~~v~~ 228 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+. ..+.|++.. ...+..+-+.
T Consensus 10 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~ 77 (240)
T 1si5_H 10 NIGWMVSLRYRN-----------KHICGGSLIKES-WVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLV 77 (240)
T ss_dssp CCTTEEEEEESS-----------SEEEEEEEEETT-EEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEE
T ss_pred CCCeEEEEEeCC-----------CeEEEEEEeeCC-EEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEE
Confidence 357788886531 237999999987 999999999754 467777732 1233333333
Q ss_pred EcC-CCCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCC----CCceeEeEEeeeecccCCc-------
Q 018198 229 HDQ-VNDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGW----SFTCTTGVISALDREIPGR------- 292 (359)
Q Consensus 229 ~d~-~~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~----~~~~~~G~vs~~~~~~~~~------- 292 (359)
+++ .+|||||+++.+.. .+.++.|... ..+..|+.+++.||.... ...+....+..+....+..
T Consensus 78 ~~p~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~ 157 (240)
T 1si5_H 78 YGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVT 157 (240)
T ss_dssp ECSSTTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------
T ss_pred cCCCCCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCcc
Confidence 443 78999999987543 4667777643 346689999999997542 2233444444333322211
Q ss_pred ccccEEEEc-----ccCCCCCccceeecCCC---eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHhcC
Q 018198 293 LIQGVIQID-----ASVNLGNSGGPLLDSSG---SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVKFS 355 (359)
Q Consensus 293 ~~~~~i~~~-----~~~~~G~SGgPl~~~~G---~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~~g 355 (359)
....+++.. ...|.|+|||||+-.++ .++||.+++..-. ...-+.+..+...++|+++.++.-
T Consensus 158 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 229 (240)
T 1si5_H 158 LNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTY 229 (240)
T ss_dssp CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred CCCCEEeecCCCCCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence 123456653 35789999999995432 7999999986221 123466788888999998877653
No 69
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.55 E-value=3.4e-13 Score=120.43 Aligned_cols=177 Identities=14% Similarity=0.157 Sum_probs=113.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|..|.|.... ...|+|.+|+++ ||||+|||+.+. ..|.+.. .+.+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 76 (238)
T 1spj_A 11 SQPWQAALYHFS-----------TFQCGGILVHRQ-WVLTAAHCISDN--YQLWLGRHNLFDDENTAQFVHVSESFPHPG 76 (238)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEEEETT-EEEECGGGCCSS--EEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred CCCcEEEEEeCC-----------CeeEEEEEecCC-EEEEcHHhCCCC--ceEEEEeccccCCCCCceEEEEEEEEcCCC
Confidence 457788886421 237999999987 999999999753 4555521 1233333333332
Q ss_pred -----------------CCCEEEEEEcCCCC----CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEee
Q 018198 232 -----------------VNDLAVLHIDAPNH----ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISA 284 (359)
Q Consensus 232 -----------------~~DlAll~v~~~~~----~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~ 284 (359)
.+|||||+++.+.. .++++.|.. .....|+.+++.||.... ...+....+..
T Consensus 77 y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~ 155 (238)
T 1spj_A 77 FNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPT-EEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKI 155 (238)
T ss_dssp SCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEE
T ss_pred ccccccccccccccccCCCCeEEEEECccccccCCceeeccCCC-CCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEee
Confidence 35999999987543 456777764 445689999999997532 12233333333
Q ss_pred eecccC-----CcccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHH
Q 018198 285 LDREIP-----GRLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 285 ~~~~~~-----~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~ 352 (359)
+....+ ......+++.. ...|.|+|||||+ .++.++||++++..+. ...-+....+...++|+++.+
T Consensus 156 ~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~-~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 234 (238)
T 1spj_A 156 LPNDECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLM-CDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTI 234 (238)
T ss_dssp ECHHHHHHHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEE-ETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred cCHHHhhhhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEE-EcCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 322111 11223566653 3578999999999 4789999999984221 123466778888888888876
Q ss_pred hc
Q 018198 353 KF 354 (359)
Q Consensus 353 ~~ 354 (359)
+.
T Consensus 235 ~~ 236 (238)
T 1spj_A 235 AE 236 (238)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 70
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.55 E-value=5e-13 Score=118.63 Aligned_cols=178 Identities=19% Similarity=0.158 Sum_probs=114.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC----------CcEEEEEEEEEcC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD----------QSTFYAQVVGHDQ 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~----------g~~~~~~v~~~d~ 231 (359)
..|.+|.|.... ....|+|.+|+++ ||||+|||+... +.|++.. ...+...-+..++
T Consensus 11 ~~Pw~v~l~~~~----------~~~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp 77 (227)
T 2psx_A 11 TQPWQAALLLRP----------NQLYCGAVLVHPQ-WLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHP 77 (227)
T ss_dssp SCTTEEEEEETT----------TEEEEEEEEEETT-EEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECT
T ss_pred CCCCEEEEEecC----------CCceEEEEEEcCC-EEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCC
Confidence 457788886421 1237999999987 999999999754 3444421 1234444344443
Q ss_pred -------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeccc-----C
Q 018198 232 -------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS------FTCTTGVISALDREI-----P 290 (359)
Q Consensus 232 -------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~~~~-----~ 290 (359)
.+|||||+++.+.. .+.|+.|. ...+..|+.+++.||..... ..+....+..+.... .
T Consensus 78 ~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~-~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~ 156 (227)
T 2psx_A 78 GYSHPGHSNDLMLIKLNRRIRPTKDVRPINVS-SHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYP 156 (227)
T ss_dssp TCCSSSCTTCCEEEEESSCCCCCSSSCCCCBC-SSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHST
T ss_pred CCCCCCCCCCEEEEEeCCCCCCCCceeeeECC-CCCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcC
Confidence 46999999987542 46778886 35567899999999975321 223333333332111 1
Q ss_pred CcccccEEEEc----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHhc
Q 018198 291 GRLIQGVIQID----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 291 ~~~~~~~i~~~----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
......+++.. ...|.|+|||||+. ++.++||++++..+. ...-+....+...++|+++.++.
T Consensus 157 ~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 225 (227)
T 2psx_A 157 RQIDDTMFCAGDKAGRDSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQA 225 (227)
T ss_dssp TTCCTTEEEECCSTTCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHHH
T ss_pred CCCCCCEEcccCCCCCccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHhc
Confidence 11223566663 35789999999994 689999999983221 12346677888888888887653
No 71
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.55 E-value=2.9e-13 Score=119.94 Aligned_cols=177 Identities=15% Similarity=0.132 Sum_probs=114.2
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC-------CcEEEEEEEEEcC---
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD-------QSTFYAQVVGHDQ--- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~-------g~~~~~~v~~~d~--- 231 (359)
..|.+|.|.. .. ...|+|.+|+++ ||||+|||+. ..+.|++.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~----~~-------~~~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~ 76 (224)
T 2qxi_A 11 SHPWQVALLS----GN-------QLHCGGVLVNER-WVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYS 76 (224)
T ss_dssp SCTTEEEEEE----TT-------EEEEEEEEEETT-EEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCC
T ss_pred CCCCEEEEee----CC-------CeEEEEEEecCC-EEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCC
Confidence 4577888831 11 126999999987 9999999995 456676642 2234444344443
Q ss_pred ----CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeecccC-----Ccc
Q 018198 232 ----VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDREIP-----GRL 293 (359)
Q Consensus 232 ----~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~~-----~~~ 293 (359)
.+|||||+++.+.. .+.++.|... ....|+.+++.||+... ...+....+..+....+ ...
T Consensus 77 ~~~~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~ 155 (224)
T 2qxi_A 77 TQTHVNDLMLVKLNSQARLSSMVKKVRLPSR-CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLL 155 (224)
T ss_dssp TTTCTTCCEEEECSSCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGC
T ss_pred CCCCcCcEEEEEeCCCCcCCCceeeEECCCC-CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcC
Confidence 36999999987643 4677778643 34689999999997542 12233333333321111 111
Q ss_pred cccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHhc
Q 018198 294 IQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 294 ~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
...+++.. ...|.|+|||||+. +|+++||.+++..+. ...-+.+..+...+.|+++.++.
T Consensus 156 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 222 (224)
T 2qxi_A 156 ENSMLCAGIPDSKKNACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMKK 222 (224)
T ss_dssp CTTEEEEECTTCCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHHH
T ss_pred CCCeEEecCCCCCCccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 23556653 35789999999995 789999999983221 12345677888888888887653
No 72
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.55 E-value=2.4e-13 Score=121.02 Aligned_cols=178 Identities=15% Similarity=0.162 Sum_probs=113.3
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC--------cEEEEEEEEEcC--
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ--------STFYAQVVGHDQ-- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g--------~~~~~~v~~~d~-- 231 (359)
..|.+|.|.. . ...|+|.+|+++ ||||+|||+.+...+.+...+. ..+..+-+..++
T Consensus 11 ~~Pw~v~l~~----~--------~~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y 77 (231)
T 2aiq_A 11 EHRFLALVYA----N--------GSLCGGTLINQE-WVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTR 77 (231)
T ss_dssp SCTTEEEEEE----T--------TEEEEEEECSSS-EEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCC
T ss_pred CCCeEEEEEc----C--------CCeEEEEEEeCC-EEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCC
Confidence 4577888862 1 126999999987 9999999998744333322211 123333333333
Q ss_pred -----CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeecccC----Ccc
Q 018198 232 -----VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW------SFTCTTGVISALDREIP----GRL 293 (359)
Q Consensus 232 -----~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~~----~~~ 293 (359)
.+|||||+++.+.. .+.++.|.. .....|+.+++.||+... ...+....+..+..... ...
T Consensus 78 ~~~~~~~DIALl~L~~~v~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 156 (231)
T 2aiq_A 78 NDTIWDKDIMLIRLNRPVRNSAHIAPLSLPS-NPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGL 156 (231)
T ss_dssp SSSTTTTCCEEEEESSCCCCBTTBCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTC
T ss_pred CCCCCCCCEEEEEecCCCCCCCcEEeeECCC-CCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCC
Confidence 46999999987643 466777864 344679999999998532 12233333333322111 112
Q ss_pred cccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHhc
Q 018198 294 IQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 294 ~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
...+++.. ...|.|+|||||+. +|+++||.+++..+. ...-+.+..+...++|+++.++.
T Consensus 157 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 157 AATTLCAGILEGGKDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp CSSEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CcCcEEeccCCCCCcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 23556653 35789999999995 689999999984221 12246678888899999887764
No 73
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.54 E-value=5e-13 Score=119.74 Aligned_cols=181 Identities=18% Similarity=0.217 Sum_probs=116.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC-eEEEEecC------CcEEEEEEEEEc----
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS-TVKVSFSD------QSTFYAQVVGHD---- 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~-~~~v~~~~------g~~~~~~v~~~d---- 230 (359)
..|.+|.|... . ...|+|.+|+++ ||||+|||+.+.. .+.|.+.. +..+..+-+..+
T Consensus 11 ~~Pw~v~l~~~---~--------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~ 78 (240)
T 2zgc_A 11 SRPYMASLQRN---G--------SHLCGGVLVHPK-WVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYK 78 (240)
T ss_dssp SSTTEEEEEET---T--------EEEEEEEEEETT-EEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCB
T ss_pred CcCcEEEEEeC---C--------CeEEEEEEEcCC-EEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCC
Confidence 35788888641 1 237999999987 9999999997653 56777642 234444434333
Q ss_pred ----CCCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeccc-------C
Q 018198 231 ----QVNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREI-------P 290 (359)
Q Consensus 231 ----~~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~-------~ 290 (359)
..+|||||+++.+.. .+.|+.|.... .+..|+.+++.||+.... ..+....+..+.... .
T Consensus 79 ~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 158 (240)
T 2zgc_A 79 PVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWN 158 (240)
T ss_dssp CTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTT
T ss_pred CCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccC
Confidence 346999999987543 46777776433 357899999999975321 223333333332111 1
Q ss_pred CcccccEEEEc-----ccCCCCCccceeecCCC--eEEEEEeeecCCCc--ceeEEEEehHHHHHHHHHHHhcC
Q 018198 291 GRLIQGVIQID-----ASVNLGNSGGPLLDSSG--SLIGVNTFITSGAF--SGIGFALPIDTVRGIVDQLVKFS 355 (359)
Q Consensus 291 ~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G--~viGi~~~~~~~~~--~~~~~aip~~~i~~~l~~l~~~g 355 (359)
......+++.. ...|.|+|||||+- ++ .++||++++..+.. ..-+.+..+...++|+++.++..
T Consensus 159 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~~ 231 (240)
T 2zgc_A 159 GSLSPSMVCLAADSKDQAPCKGDSGGPLVC-GKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRS 231 (240)
T ss_dssp TCCCTTEEEEECSSTTCBCCTTCTTCEEEE-TTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCCC
T ss_pred CCCCCceEeeccCCCCCccCCCCccCeeEE-CCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhhc
Confidence 11223566653 35789999999995 44 89999999842211 12355677888889988877653
No 74
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.54 E-value=2.9e-13 Score=120.33 Aligned_cols=183 Identities=19% Similarity=0.189 Sum_probs=116.7
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC------cEEEEEEEEEcC----
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ------STFYAQVVGHDQ---- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g------~~~~~~v~~~d~---- 231 (359)
..|..|.|....... ....|+|.+|+++ ||||+|||+.+...+.|.+... ..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~ 82 (230)
T 2hlc_A 11 LFPYQAGLDITLQDQ-------RRVWCGGSLIDNK-WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNP 82 (230)
T ss_dssp TSTTEEEEEEEETTS-------CEEEEEEEEEETT-EEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBT
T ss_pred CCCcEEEEEEEecCC-------CCEEEEEEEeeCC-EEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCC
Confidence 457888887542211 1247999999987 9999999998877777877432 233333334443
Q ss_pred ---CCCEEEEEEcCCCC---CccceEecCCC---CCCCCCEEEEEecCCCCC--CceeEeEEeeeecc-----cCC-ccc
Q 018198 232 ---VNDLAVLHIDAPNH---ELRPIHVSVSA---DLRVGKKIYAIGHPLGWS--FTCTTGVISALDRE-----IPG-RLI 294 (359)
Q Consensus 232 ---~~DlAll~v~~~~~---~~~~~~l~~~~---~~~~G~~v~~iG~p~~~~--~~~~~G~vs~~~~~-----~~~-~~~ 294 (359)
.+|||||+++ +.. .+.|+.|.... ....|+.+++.||..... ..+....+..+... ... ...
T Consensus 83 ~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~ 161 (230)
T 2hlc_A 83 DTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIV 161 (230)
T ss_dssp TTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSC
T ss_pred CCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCccc
Confidence 4699999998 432 46777775433 245789999999976432 22333333322211 111 122
Q ss_pred ccEEEEc----ccCCCCCccceeecC-CCeEEEEEeeec-CCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 295 QGVIQID----ASVNLGNSGGPLLDS-SGSLIGVNTFIT-SGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 295 ~~~i~~~----~~~~~G~SGgPl~~~-~G~viGi~~~~~-~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
..+++.. ...|.|+|||||+-. ++.++||.+++. .+. ...-.....+...++|+++.++
T Consensus 162 ~~~~Ca~~~~~~~~C~GDSGgPl~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~~ 227 (230)
T 2hlc_A 162 ESTICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNTG 227 (230)
T ss_dssp TTEEEECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHHC
T ss_pred CCeEEecCCCCCCcCCCCCCCeeEECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhhC
Confidence 3556653 357899999999943 459999999975 122 1223456778888888887654
No 75
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.54 E-value=1.2e-13 Score=122.52 Aligned_cols=183 Identities=16% Similarity=0.232 Sum_probs=116.6
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC--CCeEEEEecCC--------cEEEEEEEEEc-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG--ASTVKVSFSDQ--------STFYAQVVGHD- 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~--~~~~~v~~~~g--------~~~~~~v~~~d- 230 (359)
..|.+|.|...... ....|+|.+|+++ ||||+|||+.+ ...+.|.+... .....+.+..+
T Consensus 10 ~~Pw~v~l~~~~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~ 80 (228)
T 3h7o_A 10 QVPWTVAVRTYPGE--------ESLTCGGAILSQW-FVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSF 80 (228)
T ss_dssp GSTTEEEEEECGGG--------CCEEEEEEESSSS-EEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESS
T ss_pred CCCeEEEEeecCCC--------CceEeeeEEeeCC-EEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccc
Confidence 46788888753211 0126999999987 99999999954 34566666321 11222222222
Q ss_pred -----CCCCEEEEEEcCCCC----CccceEecCCC-CCCCCCEEEEEecCCCCCC-----ceeEeEEeeeecccC-----
Q 018198 231 -----QVNDLAVLHIDAPNH----ELRPIHVSVSA-DLRVGKKIYAIGHPLGWSF-----TCTTGVISALDREIP----- 290 (359)
Q Consensus 231 -----~~~DlAll~v~~~~~----~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~~-----~~~~G~vs~~~~~~~----- 290 (359)
..+|||||+++.+.. .+.++.|.... .+..|+.+++.||...... .+....+..+....+
T Consensus 81 y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 160 (228)
T 3h7o_A 81 YRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYG 160 (228)
T ss_dssp CBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHT
T ss_pred cCCCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhc
Confidence 346999999987643 45677776433 2678999999999754321 233333333332111
Q ss_pred C-cccccEEEEc---ccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 291 G-RLIQGVIQID---ASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 291 ~-~~~~~~i~~~---~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
. .....+++.. ...|.|+|||||+. +++++||.+++.......-+....+...++|+++.++.
T Consensus 161 ~~~~~~~~~Ca~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~p~vyt~v~~~~~WI~~~i~~ 227 (228)
T 3h7o_A 161 PIFLSLQVFCAQKVGVSLESGDAGDPTVQ-QDTLVGVAAYFPKRPEGAPEVFTKVGSYVSWIQDIIKK 227 (228)
T ss_dssp TSCCCSSEEEEECTTCCCCGGGTTCEEEE-TTEEEEEECCCTTCCTTCCEEEEEGGGTHHHHHHHHTT
T ss_pred CccCCceEEecCCCCCcCCCCCCCCccee-cCeEEEEEeecCcCCCCCCcEEEEHHHHHHHHHHHhhc
Confidence 1 1123455553 45788999999995 78999999998642223346678888899999888764
No 76
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.53 E-value=2e-13 Score=122.22 Aligned_cols=181 Identities=15% Similarity=0.158 Sum_probs=114.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC--CCeEEEEecC--------CcEEEEEEEEEcC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG--ASTVKVSFSD--------QSTFYAQVVGHDQ 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~--~~~~~v~~~~--------g~~~~~~v~~~d~ 231 (359)
..|.+|.|..... . ....|+|.+|+++ ||||+|||+.+ ...+.|.+.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~~--~------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp 81 (241)
T 1m9u_A 11 EFPWQLSQQRQSG--S------WSHSCGASLLSST-SALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHE 81 (241)
T ss_dssp SSTTEEEEEEESS--S------EEEEEEEEECSSS-EEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECT
T ss_pred CcCeEEEEEecCC--c------eeeeeEEEEEeCC-EEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCC
Confidence 4577888875321 1 1237999999987 99999999976 3567777732 2345555555554
Q ss_pred CC---------CEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC---
Q 018198 232 VN---------DLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP--- 290 (359)
Q Consensus 232 ~~---------DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~--- 290 (359)
++ |||||+++.+.. .+.++.|... .....|+.+++.||..... ..+....+..+....+
T Consensus 82 ~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (241)
T 1m9u_A 82 NYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAA 161 (241)
T ss_dssp TTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHH
T ss_pred CcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhh
Confidence 43 999999987643 4677777654 3233899999999975321 2333333333321111
Q ss_pred --C--c--ccccEEEEc-----ccCCCCCccceeecCCC--eEEEEEee--ec-CCCc--ceeEEEEehHHHHHHHHHH
Q 018198 291 --G--R--LIQGVIQID-----ASVNLGNSGGPLLDSSG--SLIGVNTF--IT-SGAF--SGIGFALPIDTVRGIVDQL 351 (359)
Q Consensus 291 --~--~--~~~~~i~~~-----~~~~~G~SGgPl~~~~G--~viGi~~~--~~-~~~~--~~~~~aip~~~i~~~l~~l 351 (359)
. . ....+++.. ...|.|+|||||+-.+| .++||.++ .. .+.. ..-+....+...++|+++.
T Consensus 162 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~~ 240 (241)
T 1m9u_A 162 MVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDN 240 (241)
T ss_dssp HTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHHH
T ss_pred hcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhhh
Confidence 1 1 223567764 25789999999996445 89999999 32 1111 2245677788888877753
No 77
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.53 E-value=4.9e-13 Score=120.45 Aligned_cols=182 Identities=16% Similarity=0.210 Sum_probs=116.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|..|.|.... ....|+|.+|+++ ||||+|||+.+...+.|++.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~----------~~~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (250)
T 1aut_C 11 DSPWQVVLLDSK----------KKLACGAVLIHPS-WVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPN 79 (250)
T ss_dssp SCTTEEEEECTT----------SCEEEEEEEEETT-EEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTT
T ss_pred CCCCEEEEecCC----------CceEEEEEEeeCC-EEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCC
Confidence 357778775311 1237999999987 999999999887777777743 1234444444454
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCC-----CCCCCCEEEEEecCCCCCC----------ceeEeEEeeeec
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSA-----DLRVGKKIYAIGHPLGWSF----------TCTTGVISALDR 287 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~-----~~~~G~~v~~iG~p~~~~~----------~~~~G~vs~~~~ 287 (359)
.+|||||+++.+.. .+.|+.|.... ....|+.+++.||+..... .+....+..+..
T Consensus 80 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~ 159 (250)
T 1aut_C 80 YSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPH 159 (250)
T ss_dssp CBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECH
T ss_pred CCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecH
Confidence 36999999987643 35667775321 2357999999999753211 223333332221
Q ss_pred c-----cCCcccccEEEEc-----ccCCCCCccceeecC-CCe--EEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 288 E-----IPGRLIQGVIQID-----ASVNLGNSGGPLLDS-SGS--LIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 288 ~-----~~~~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G~--viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
. ........+++.. ...|.|+|||||+.. +|+ ++||++++..-. ...-+....+...+.++++.++
T Consensus 160 ~~C~~~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 239 (250)
T 1aut_C 160 NECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR 239 (250)
T ss_dssp HHHHHHCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC
T ss_pred HHhhHHhccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhh
Confidence 1 1111223567763 357899999999953 564 999999986321 1234567888888888888765
Q ss_pred c
Q 018198 354 F 354 (359)
Q Consensus 354 ~ 354 (359)
.
T Consensus 240 ~ 240 (250)
T 1aut_C 240 D 240 (250)
T ss_dssp -
T ss_pred c
Confidence 4
No 78
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.53 E-value=8.2e-13 Score=117.78 Aligned_cols=181 Identities=13% Similarity=0.087 Sum_probs=115.3
Q ss_pred CCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC----CCeEEEEecC-----------CcEEEEEEE
Q 018198 163 ISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG----ASTVKVSFSD-----------QSTFYAQVV 227 (359)
Q Consensus 163 ~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~----~~~~~v~~~~-----------g~~~~~~v~ 227 (359)
.|.+|.|.... ....|+|.+|+++ ||||+|||+.+ ...+.|++.. ...+...-+
T Consensus 9 ~Pw~v~l~~~~----------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i 77 (234)
T 2asu_B 9 SPWTVSLRNRQ----------GQHFCGGSLVKEQ-WILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKM 77 (234)
T ss_dssp CTTEEEEECTT----------SCEEEEEEEEETT-EEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEE
T ss_pred CcceEEeeccC----------CCEEEEEEEEeCC-EEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEE
Confidence 57778876421 1237999999987 99999999964 3456676632 123444334
Q ss_pred EEc-CCCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC----CCceeEeEEeeeeccc-----CCcc
Q 018198 228 GHD-QVNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW----SFTCTTGVISALDREI-----PGRL 293 (359)
Q Consensus 228 ~~d-~~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~----~~~~~~G~vs~~~~~~-----~~~~ 293 (359)
..+ ..+|||||+++.+.. .+.++.|.... .+..|+.+++.||.... ...+....+..+.... ....
T Consensus 78 ~~hp~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~ 157 (234)
T 2asu_B 78 VCGPSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRV 157 (234)
T ss_dssp EECSTTCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCC
T ss_pred ecCCCCCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCcc
Confidence 444 368999999987643 46777776433 35689999999997542 2233443343332211 1122
Q ss_pred cccEEEEc-----ccCCCCCccceeecCC-C--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHhc
Q 018198 294 IQGVIQID-----ASVNLGNSGGPLLDSS-G--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 294 ~~~~i~~~-----~~~~~G~SGgPl~~~~-G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
....++.. ...|.|+|||||+-.. | .++||.+++..-. ...-+.+..+...++|+++.++.
T Consensus 158 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 227 (234)
T 2asu_B 158 RESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMRL 227 (234)
T ss_dssp CTTEEEECCCSSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC--
T ss_pred CcceEeecCCCCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHhhc
Confidence 23566663 3578999999999542 3 7999999976221 12346677888888888887654
No 79
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.53 E-value=1.3e-12 Score=115.46 Aligned_cols=164 Identities=13% Similarity=0.184 Sum_probs=106.9
Q ss_pred eEEEEEEeCCCEEEecccccCCC---CeEEEEecC-------CcEEEEEEEEEcCC-------CCEEEEEEcCCCCCccc
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD-------QSTFYAQVVGHDQV-------NDLAVLHIDAPNHELRP 249 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~-------g~~~~~~v~~~d~~-------~DlAll~v~~~~~~~~~ 249 (359)
.|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+...-+..+++ +|||||+++.+. .+++
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v-~~~~ 98 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI-NQPT 98 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC-CSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC-CCCc
Confidence 4999999987 999999999764 345666632 23444444445543 599999999865 4677
Q ss_pred eEecCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC------CcccccEEEEc-----ccCCCCCcccee
Q 018198 250 IHVSVSADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP------GRLIQGVIQID-----ASVNLGNSGGPL 313 (359)
Q Consensus 250 ~~l~~~~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~------~~~~~~~i~~~-----~~~~~G~SGgPl 313 (359)
+++.... ...+..+++.||..... ..+....+..+....+ ......+++.. ...|.|+|||||
T Consensus 99 i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl 177 (224)
T 3beu_A 99 LKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPM 177 (224)
T ss_dssp CEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEE
T ss_pred ccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCee
Confidence 7876433 34566999999975422 2233333333321111 11223566663 357899999999
Q ss_pred ecCC--C--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 314 LDSS--G--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 314 ~~~~--G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
+..+ | .++||.+++..-. ...-+.+..+...++++++.++
T Consensus 178 ~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 178 FRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp EEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred EEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 9543 3 6999999986321 1234667888999999988765
No 80
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.52 E-value=1.4e-12 Score=115.96 Aligned_cols=179 Identities=13% Similarity=0.156 Sum_probs=114.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC-----CcEEEEEEEEEcC--
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD-----QSTFYAQVVGHDQ-- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~-----g~~~~~~v~~~d~-- 231 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+. ..+.+.+.. +.....+-+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y 78 (232)
T 2oq5_A 11 EWPWQASLQWDG-----------SHRCGATLINAT-WLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKY 78 (232)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEEEETT-EEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTC
T ss_pred CCCeeEEEEeCC-----------CeeEEEEEEcCC-EEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCC
Confidence 357788886421 237999999987 999999999753 356676632 2334444444443
Q ss_pred -----CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC-------
Q 018198 232 -----VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP------- 290 (359)
Q Consensus 232 -----~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~------- 290 (359)
.+|||||+++.+.. .+.++.|.... .+..|+.+++.||.... ...+....+..+....+
T Consensus 79 ~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 158 (232)
T 2oq5_A 79 KHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYN 158 (232)
T ss_dssp CTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTT
T ss_pred CCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccC
Confidence 46999999987643 46677776433 45679999999997532 12333333433322111
Q ss_pred CcccccEEEEc-----ccCCCCCccceeecCC--C--eEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHH
Q 018198 291 GRLIQGVIQID-----ASVNLGNSGGPLLDSS--G--SLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 291 ~~~~~~~i~~~-----~~~~~G~SGgPl~~~~--G--~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~ 352 (359)
......+++.. ...|.|+|||||+..+ | .++||.+++..-.. ..-+.+.-+...++|+++..
T Consensus 159 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 230 (232)
T 2oq5_A 159 DAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKT 230 (232)
T ss_dssp TCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHHH
T ss_pred CccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHHh
Confidence 11223567763 3578999999999533 3 69999999863211 23456677888888887754
No 81
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.52 E-value=7.9e-13 Score=118.50 Aligned_cols=185 Identities=17% Similarity=0.154 Sum_probs=116.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
-.|.+|.|........ ....|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..
T Consensus 11 ~~Pw~v~l~~~~~~~~------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~ 83 (247)
T 3mhw_U 11 NQPWFAAIYRRHRGGS------VTYVCGGSLISPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLIL 83 (247)
T ss_dssp GSTTEEEEEEECTTSC------EEEEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEE
T ss_pred CCCCEEEEEEecCCCc------cceEEEEEEEeCC-EEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEE
Confidence 4678888865432111 0236999999987 999999999653 346676632 22344444444
Q ss_pred cCC---------CCEEEEEEcCC-------CCCccceEecCC-CCCCCCCEEEEEecCCCCC------CceeEeEEeeee
Q 018198 230 DQV---------NDLAVLHIDAP-------NHELRPIHVSVS-ADLRVGKKIYAIGHPLGWS------FTCTTGVISALD 286 (359)
Q Consensus 230 d~~---------~DlAll~v~~~-------~~~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~ 286 (359)
++. +|||||+++.+ ...+.++.|... ..+..|+.+++.||..... ..+....+..+.
T Consensus 84 hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~ 163 (247)
T 3mhw_U 84 HKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLIS 163 (247)
T ss_dssp CTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEEC
T ss_pred CCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEC
Confidence 433 59999999865 124667777543 4567799999999975321 223333333332
Q ss_pred cccC-------CcccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHH
Q 018198 287 REIP-------GRLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQ 350 (359)
Q Consensus 287 ~~~~-------~~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~ 350 (359)
...+ ......+++.. ...|.|+|||||+-. +| .++||.+++..-. ...-+.+..+...++|+++
T Consensus 164 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~ 243 (247)
T 3mhw_U 164 HRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRS 243 (247)
T ss_dssp HHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHHH
T ss_pred hHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 2111 11223556653 357899999999954 44 5999999986322 1234667788888888887
Q ss_pred HHh
Q 018198 351 LVK 353 (359)
Q Consensus 351 l~~ 353 (359)
.++
T Consensus 244 ~~~ 246 (247)
T 3mhw_U 244 HTK 246 (247)
T ss_dssp HTT
T ss_pred Hhc
Confidence 664
No 82
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.52 E-value=9.5e-13 Score=117.60 Aligned_cols=180 Identities=17% Similarity=0.211 Sum_probs=114.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC--------CeEEEEecC----------CcEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA--------STVKVSFSD----------QSTFY 223 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~--------~~~~v~~~~----------g~~~~ 223 (359)
..|.+|.|.... ....|+|.+|+++ ||||+|||+.+. ..+.+.+.. ...+.
T Consensus 11 ~~Pw~v~l~~~~----------~~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~ 79 (241)
T 3ncl_A 11 EWPWQVSLHALG----------QGHICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERR 79 (241)
T ss_dssp SSTTEEEEEETT----------TEEEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEE
T ss_pred CCCcEEEEEcCC----------CceEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEE
Confidence 457788886421 1136999999987 999999999543 346666631 23344
Q ss_pred EEEEEEcC-------CCCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCCC-----CceeEeEEeeeec
Q 018198 224 AQVVGHDQ-------VNDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDR 287 (359)
Q Consensus 224 ~~v~~~d~-------~~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~ 287 (359)
.+-+..++ .+|||||+++.+.. .+.++.|... ..+..|+.+++.||..... ..+....+..+..
T Consensus 80 v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~ 159 (241)
T 3ncl_A 80 LKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQ 159 (241)
T ss_dssp EEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCH
T ss_pred EEEEEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECH
Confidence 55455554 46999999987543 4667777543 3356899999999975321 1233333333322
Q ss_pred ccC-----CcccccEEEEc-----ccCCCCCccceeec--CCCe--EEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHH
Q 018198 288 EIP-----GRLIQGVIQID-----ASVNLGNSGGPLLD--SSGS--LIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 288 ~~~-----~~~~~~~i~~~-----~~~~~G~SGgPl~~--~~G~--viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~ 352 (359)
..+ ......+++.. ...|.|+|||||+. .+|+ ++||.+++..-.. ..-+.+..+...++|+++..
T Consensus 160 ~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~~ 239 (241)
T 3ncl_A 160 TTCENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENT 239 (241)
T ss_dssp HHHHHHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHH
T ss_pred HHhhhhcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 111 12223556653 35789999999983 3554 8999999863221 23456777888888887754
No 83
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.52 E-value=1e-12 Score=118.46 Aligned_cols=185 Identities=16% Similarity=0.199 Sum_probs=117.7
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC----------cEEEEEEEEEc
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ----------STFYAQVVGHD 230 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g----------~~~~~~v~~~d 230 (359)
...|.+|.|....... ....|+|.+|+++ ||||+|||+.+...+.|.+... ..+..+-+..+
T Consensus 23 ~~~Pw~v~l~~~~~~~-------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~H 94 (251)
T 1pyt_D 23 HSWPWQISLQYLRDNT-------WRHTCGGTLITPN-HVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVH 94 (251)
T ss_dssp TSSTTEEEEEEEETTE-------EEEEEEEEEEETT-EEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEEC
T ss_pred CCCCceEEEEEEcCCC-------cceEEEeEEecCC-EEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEEC
Confidence 3467888886532111 1236999999987 9999999998877788887421 23444444444
Q ss_pred C-------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC----
Q 018198 231 Q-------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP---- 290 (359)
Q Consensus 231 ~-------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~---- 290 (359)
+ .+|||||+++.+.. .+.|+.|.... .+..++.+++.||..... ..+....+..+....+
T Consensus 95 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 174 (251)
T 1pyt_D 95 EKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRD 174 (251)
T ss_dssp TTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTT
T ss_pred CCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhh
Confidence 3 46999999987543 46677776433 356789999999975321 1222233322221111
Q ss_pred ---CcccccEEEEc----ccCCCCCccceeecC-CC--eEEEEEeeecC-CC--cceeEEEEehHHHHHHHHHHHh
Q 018198 291 ---GRLIQGVIQID----ASVNLGNSGGPLLDS-SG--SLIGVNTFITS-GA--FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 291 ---~~~~~~~i~~~----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~-~~--~~~~~~aip~~~i~~~l~~l~~ 353 (359)
......+++.. ...|.|+|||||+-. +| .++||++++.. +. ...-+.+..+...+.|+++.++
T Consensus 175 ~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 250 (251)
T 1pyt_D 175 WWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQ 250 (251)
T ss_dssp TTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHTT
T ss_pred ccCCCcCCCeEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 11223566664 257899999999954 45 69999999851 22 1223566778888888877653
No 84
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.51 E-value=1.3e-12 Score=117.19 Aligned_cols=180 Identities=17% Similarity=0.202 Sum_probs=116.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC----------------CCeEEEEecC-------
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG----------------ASTVKVSFSD------- 218 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~----------------~~~~~v~~~~------- 218 (359)
..|.+|.|.... ....|+|.+|+++ ||||+|||+.+ ...+.|.+..
T Consensus 11 ~~Pw~v~l~~~~----------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~ 79 (251)
T 3gov_B 11 TTPWIAMLSHLN----------GQPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSD 79 (251)
T ss_dssp SCTTEEEEEETT----------CCEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCC
T ss_pred CcCeEEEEeccC----------CCeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCC
Confidence 457788886421 1237999999987 99999999954 2456777643
Q ss_pred --CcEEEEEEEEEcCC-------CCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC----CCceeEeEE
Q 018198 219 --QSTFYAQVVGHDQV-------NDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW----SFTCTTGVI 282 (359)
Q Consensus 219 --g~~~~~~v~~~d~~-------~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~----~~~~~~G~v 282 (359)
+..+..+-+..++. +|||||+++.+.. .+.|+.|... ....|+.+++.||.... ...+....+
T Consensus 80 ~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~ 158 (251)
T 3gov_B 80 ENEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEG-PQQEGAMVIVSGWGKQFLQRFPETLMEIEI 158 (251)
T ss_dssp SSCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEECSCCTTSCCCSBCEEEEE
T ss_pred CcceEeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCC-CCCCCCEEEEEcCCCCCCCCCCccceEEee
Confidence 23344444555544 6999999987542 4667788543 44789999999997542 222333333
Q ss_pred eeeecccC--------CcccccEEEEc-----ccCCCCCccceeecC---CC--eEEEEEeeecCCCc-ceeEEEEehHH
Q 018198 283 SALDREIP--------GRLIQGVIQID-----ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGAF-SGIGFALPIDT 343 (359)
Q Consensus 283 s~~~~~~~--------~~~~~~~i~~~-----~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~~-~~~~~aip~~~ 343 (359)
..+....+ ......+++.. ...|.|+|||||+-. +| .++||.+++..-.. ..-+.+..+..
T Consensus 159 ~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~ 238 (251)
T 3gov_B 159 PIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHH 238 (251)
T ss_dssp EEECHHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTT
T ss_pred EEECHHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHH
Confidence 33321111 11223567763 357899999999853 34 69999999863221 22366778888
Q ss_pred HHHHHHHHHh
Q 018198 344 VRGIVDQLVK 353 (359)
Q Consensus 344 i~~~l~~l~~ 353 (359)
.++|+++.++
T Consensus 239 ~~~WI~~~~~ 248 (251)
T 3gov_B 239 NKDWIQRVTG 248 (251)
T ss_dssp THHHHHHHHC
T ss_pred hHHHHHHHhc
Confidence 8888888764
No 85
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.51 E-value=1.3e-12 Score=117.34 Aligned_cols=180 Identities=16% Similarity=0.171 Sum_probs=116.3
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
..|.+|.|... ...|+|.+|+++ ||||+|||+.+. ..+.|++.. ...+..+-+..
T Consensus 11 ~~Pw~v~l~~~------------~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~ 77 (248)
T 2r0l_A 11 SHPWLAAIYIG------------DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIP 77 (248)
T ss_dssp SSTTEEEEEET------------TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEE
T ss_pred CCCeEEEEEcC------------CceEEEEEEcCC-EEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEe
Confidence 45777888642 136999999987 999999999764 467777743 12333333333
Q ss_pred c--------CCCCEEEEEEcCC----C---CCccceEecCC-CCCCCCCEEEEEecCCCC------CCceeEeEEeeeec
Q 018198 230 D--------QVNDLAVLHIDAP----N---HELRPIHVSVS-ADLRVGKKIYAIGHPLGW------SFTCTTGVISALDR 287 (359)
Q Consensus 230 d--------~~~DlAll~v~~~----~---~~~~~~~l~~~-~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~ 287 (359)
+ ..+|||||+++.+ . ..+.++.|... ..+..|+.+++.||.... ...+....+..+..
T Consensus 78 hp~y~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~ 157 (248)
T 2r0l_A 78 YTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVAD 157 (248)
T ss_dssp CTTCCTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCH
T ss_pred CCccCcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCH
Confidence 3 2469999999876 1 24677777643 345689999999997532 22334444433322
Q ss_pred ccC------C-cccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHH
Q 018198 288 EIP------G-RLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQL 351 (359)
Q Consensus 288 ~~~------~-~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l 351 (359)
..+ + .....+++.. ...|.|+|||||+.. +| .++||++++..-. ...-+.+..+...+.|+++.
T Consensus 158 ~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 237 (248)
T 2r0l_A 158 HKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 237 (248)
T ss_dssp HHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred HHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 111 1 1123567763 357899999999954 45 6999999986221 12346678888888888887
Q ss_pred Hhc
Q 018198 352 VKF 354 (359)
Q Consensus 352 ~~~ 354 (359)
++.
T Consensus 238 ~~~ 240 (248)
T 2r0l_A 238 IRP 240 (248)
T ss_dssp HC-
T ss_pred hcC
Confidence 654
No 86
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.51 E-value=2e-12 Score=116.33 Aligned_cols=186 Identities=14% Similarity=0.093 Sum_probs=116.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
..|..|.|........ .....|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..
T Consensus 11 ~~Pw~v~l~~~~~~~~-----~~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~ 84 (252)
T 1rtf_B 11 SHPWQAAIFAKHRRSP-----GERFLCGGILISSC-WILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIV 84 (252)
T ss_dssp GSTTEEEEEEEC---------CEEEEEEEEECSSS-EEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEE
T ss_pred CcCCEEEEEEecCCCC-----CCCEEEEEEEEeCC-EEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEe
Confidence 3578888875422110 01237999999987 999999999753 457777732 23344444444
Q ss_pred cC-------CCCEEEEEEcCC----C---CCccceEecCCC-CCCCCCEEEEEecCCCCC------CceeEeEEeeeecc
Q 018198 230 DQ-------VNDLAVLHIDAP----N---HELRPIHVSVSA-DLRVGKKIYAIGHPLGWS------FTCTTGVISALDRE 288 (359)
Q Consensus 230 d~-------~~DlAll~v~~~----~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~~~ 288 (359)
++ .+|||||+++.+ . ..+.++.|.... .+..++.+++.||..... ..+....+..+...
T Consensus 85 Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~ 164 (252)
T 1rtf_B 85 HKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSS 164 (252)
T ss_dssp CTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGG
T ss_pred CCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHH
Confidence 43 469999999876 2 246677776432 356789999999975321 22333444333322
Q ss_pred cCC-------cccccEEEEc-----------ccCCCCCccceeecC-CC--eEEEEEeeecCCCc-ceeEEEEehHHHHH
Q 018198 289 IPG-------RLIQGVIQID-----------ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGAF-SGIGFALPIDTVRG 346 (359)
Q Consensus 289 ~~~-------~~~~~~i~~~-----------~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~~-~~~~~aip~~~i~~ 346 (359)
.+. .....+++.. ...|.|+|||||+-. +| .++||++++..-.. ..-+.+.-+...++
T Consensus 165 ~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~ 244 (252)
T 1rtf_B 165 RCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLD 244 (252)
T ss_dssp GSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred HhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHHHH
Confidence 221 1123556653 457899999999954 45 69999999863211 22356777888888
Q ss_pred HHHHHHh
Q 018198 347 IVDQLVK 353 (359)
Q Consensus 347 ~l~~l~~ 353 (359)
|+++.++
T Consensus 245 WI~~~~~ 251 (252)
T 1rtf_B 245 WIRDNMR 251 (252)
T ss_dssp HHHHHCC
T ss_pred HHHHhcC
Confidence 8887653
No 87
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.51 E-value=9.2e-13 Score=117.91 Aligned_cols=184 Identities=16% Similarity=0.151 Sum_probs=116.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
..|..|.|...... ....|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..
T Consensus 11 ~~Pw~v~l~~~~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 81 (241)
T 2any_A 11 EWPWQVSLQVKLTA--------QRHLCGGSLIGHQ-WVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIII 81 (241)
T ss_dssp SSTTEEEEEEESSS--------EEEEEEEEEEETT-EEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEE
T ss_pred CCCcEEEEEEEcCC--------CceEEEEEEecCC-EEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEE
Confidence 45788888653211 1236999999987 999999999754 345666532 12233443444
Q ss_pred cC-------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC---
Q 018198 230 DQ-------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP--- 290 (359)
Q Consensus 230 d~-------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~--- 290 (359)
++ .+|||||+++.+.. .+.|+.|.... ....|+.+++.||..... ..+....+..+....+
T Consensus 82 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (241)
T 2any_A 82 HQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKR 161 (241)
T ss_dssp CTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTT
T ss_pred CCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhH
Confidence 43 46999999987543 45677775432 356799999999975321 2233333333321111
Q ss_pred --C-cccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHhc
Q 018198 291 --G-RLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 291 --~-~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
. .....+++.. ...|.|+|||||+-. +| .++||.+++..-. ...-+.+..+...+.|+++.++.
T Consensus 162 ~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~~ 237 (241)
T 2any_A 162 YQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQS 237 (241)
T ss_dssp SCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHSC
T ss_pred hccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhhc
Confidence 1 1223566663 357899999999954 45 6999999986221 12345677888889998887654
No 88
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=99.51 E-value=3.4e-14 Score=120.57 Aligned_cols=91 Identities=26% Similarity=0.418 Sum_probs=84.8
Q ss_pred eeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc-CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeecc---
Q 018198 43 QRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN-KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQ--- 118 (359)
Q Consensus 43 ~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~-~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~--- 118 (359)
|++++..+++|..|+|+++.+.|..||||+.+|.+++++ ++.+||||++.++++.++||.+||+|+++|.+|.++.
T Consensus 28 m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~~ieqL~kQL~KLidVikV~dl~~~~ 107 (193)
T 2fgc_A 28 REHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKVTPIDPLP 107 (193)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTTSTTEEEEEECCSSG
T ss_pred eEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHHHHHHHHHHhcCcCceEEEEEecCCC
Confidence 567999999999999999999999999999999998766 5789999999999999999999999999999999984
Q ss_pred CCCCCCCcccccCCC
Q 018198 119 SSSSSLEPFFLPCSG 133 (359)
Q Consensus 119 ~~~~~~el~li~~~~ 133 (359)
.+...|||+|+|+.+
T Consensus 108 ~~~v~REl~LiKV~~ 122 (193)
T 2fgc_A 108 ENRVEREMALIKVRF 122 (193)
T ss_dssp GGEEEEEEEEEEEEC
T ss_pred CccceeEEEEEEEeC
Confidence 578999999999973
No 89
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.51 E-value=3.4e-13 Score=120.68 Aligned_cols=178 Identities=15% Similarity=0.160 Sum_probs=107.7
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEc-
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHD- 230 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d- 230 (359)
...|..|.|.. .. ...|+|.+|+++ ||||+|||+.+. +.|++.. +..+..+-+..+
T Consensus 13 ~~~Pw~v~l~~---~~--------~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp 78 (240)
T 1sgf_A 13 NSQPWHVAVYR---FN--------KYQCGGVLLDRN-WVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHP 78 (240)
T ss_dssp CCCTTEEEEEC---TT--------SCCEEEEECSSS-EEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECT
T ss_pred CCcCCEEEEEe---CC--------CeEEEEEEecCC-EEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCC
Confidence 34578888831 11 236999999987 999999999753 3444421 223333333333
Q ss_pred -----------------CCCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC------CceeEeEEee
Q 018198 231 -----------------QVNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS------FTCTTGVISA 284 (359)
Q Consensus 231 -----------------~~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~ 284 (359)
..+|||||+++.+.. .+.|+.|.. .....|+.+++.||..... ..+....+..
T Consensus 79 ~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~ 157 (240)
T 1sgf_A 79 DFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPT-EEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKL 157 (240)
T ss_dssp TSCGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCC-SCCCTTCEEEEC-------C---------CEEEEE
T ss_pred CCcccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCC-CCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeE
Confidence 246999999987543 467788864 3457899999999975321 1222222322
Q ss_pred eeccc-----CCcccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCCc--ceeEEEEehHHHHHHHHHHH
Q 018198 285 LDREI-----PGRLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGAF--SGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 285 ~~~~~-----~~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 352 (359)
+.... .......+++.. ...|.|+|||||+. +|.++||.+++..+.. ..-+.+..+...++|+++.+
T Consensus 158 ~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 236 (240)
T 1sgf_A 158 LPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETM 236 (240)
T ss_dssp ECTHHHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHH
T ss_pred eCHHHhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHH
Confidence 22111 111223456653 24789999999995 7899999999842221 22466778888899988877
Q ss_pred hc
Q 018198 353 KF 354 (359)
Q Consensus 353 ~~ 354 (359)
+.
T Consensus 237 ~~ 238 (240)
T 1sgf_A 237 AN 238 (240)
T ss_dssp HS
T ss_pred hc
Confidence 64
No 90
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.51 E-value=2.3e-12 Score=115.09 Aligned_cols=181 Identities=13% Similarity=0.126 Sum_probs=113.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC-----CeEEEEecC-------C--cEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA-----STVKVSFSD-------Q--STFYAQVV 227 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~-----~~~~v~~~~-------g--~~~~~~v~ 227 (359)
..|..|.|........ ...|+|.+|+++ ||||+|||+.+. ..+.|.+.. + ..+..+-+
T Consensus 11 ~~Pw~v~l~~~~~~~~-------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i 82 (237)
T 2f91_A 11 EFPYQLSFQETFIGFS-------FHFCGASIYNEN-YAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKI 82 (237)
T ss_dssp TSTTEEEEEEEETTEE-------EEEEEEEEEETT-EEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEE
T ss_pred CCCcEEEEEEecCCCC-------cceEEEEEeeCC-EEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEE
Confidence 3577888865321110 124999999987 999999999653 457777632 2 33444444
Q ss_pred EEcC-------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC--
Q 018198 228 GHDQ-------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP-- 290 (359)
Q Consensus 228 ~~d~-------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~-- 290 (359)
..++ .+|||||+++.+.. .+.|+.|... ....++.+++.||..... ..+....+..+....+
T Consensus 83 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 161 (237)
T 2f91_A 83 ILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQ-GHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRA 161 (237)
T ss_dssp EECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCT-TCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHH
T ss_pred EECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCC-CCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhh
Confidence 4444 46999999987643 4677888643 346789999999975321 2233333333321111
Q ss_pred ----CcccccEEEEc-----ccCCCCCccceeecCCC---eEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHH
Q 018198 291 ----GRLIQGVIQID-----ASVNLGNSGGPLLDSSG---SLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQL 351 (359)
Q Consensus 291 ----~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G---~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l 351 (359)
......+++.. ...|.|+|||||+..++ .++||.+++..-.. ..-+.+..+...++|+++.
T Consensus 162 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 162 DYGADEILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp HHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred hhCCCCcCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHh
Confidence 11223567763 35789999999995432 79999999863221 2235667788888887764
No 91
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.50 E-value=8.9e-13 Score=117.81 Aligned_cols=183 Identities=18% Similarity=0.187 Sum_probs=115.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
..|..|.|.....+ ....|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..
T Consensus 11 ~~Pw~v~l~~~~~~--------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 81 (238)
T 3bg8_A 11 EWPWQVTLHTTSPT--------QRHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIII 81 (238)
T ss_dssp SSTTEEEEEECSSS--------CEEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEE
T ss_pred CcCcEEEEEeecCC--------CcEEEEEEEeeCC-EEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEE
Confidence 45778888653211 1237999999987 999999999654 456676631 23455554555
Q ss_pred cC-------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecc-----
Q 018198 230 DQ-------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDRE----- 288 (359)
Q Consensus 230 d~-------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~----- 288 (359)
++ .+|||||+++.+.. .+.|+.|.... ....++.+++.||.... ...+....+..+...
T Consensus 82 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (238)
T 3bg8_A 82 HDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKR 161 (238)
T ss_dssp CTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHH
T ss_pred CCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhh
Confidence 54 46999999987543 45677775432 35678999999997532 122233322222211
Q ss_pred cCC-cccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 289 IPG-RLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 289 ~~~-~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
... .....+++.. ...|.|+|||||+-. +| .++||.+++..-. ...-+.+.-+...+.++++.++
T Consensus 162 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 236 (238)
T 3bg8_A 162 YRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ 236 (238)
T ss_dssp CTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred hcCCCCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 111 1223566663 357899999999954 44 5999999986221 1224567778888888887654
No 92
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.50 E-value=9.9e-13 Score=117.41 Aligned_cols=178 Identities=16% Similarity=0.188 Sum_probs=114.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC----CCeEEEEecCC-------cEEEEEEEEEc
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG----ASTVKVSFSDQ-------STFYAQVVGHD 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~----~~~~~v~~~~g-------~~~~~~v~~~d 230 (359)
..|.+|.|.. ...|+|.+|+++ ||||+|||+.+ ...+.|.+... ..+..+-+..+
T Consensus 11 ~~Pw~v~l~~-------------~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h 76 (242)
T 3tvj_B 11 DFPWQVLILG-------------GTTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIH 76 (242)
T ss_dssp SSTTEEEEES-------------SEEEEEEEETTT-EEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEEC
T ss_pred CCCCEEEEec-------------CCcEEEEEecCC-EEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeC
Confidence 4577787751 126999999987 99999999953 44567776431 23333334433
Q ss_pred C--------CCCEEEEEEcCCCC---CccceEecCCC---CCCCCCEEEEEecCCCCC----CceeEeEEeeeecccC--
Q 018198 231 Q--------VNDLAVLHIDAPNH---ELRPIHVSVSA---DLRVGKKIYAIGHPLGWS----FTCTTGVISALDREIP-- 290 (359)
Q Consensus 231 ~--------~~DlAll~v~~~~~---~~~~~~l~~~~---~~~~G~~v~~iG~p~~~~----~~~~~G~vs~~~~~~~-- 290 (359)
+ .+|||||+++.+.. .+.++.|.... .+..|+.+++.||..... ..+....+..+....+
T Consensus 77 p~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~ 156 (242)
T 3tvj_B 77 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTA 156 (242)
T ss_dssp TTCCTTSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHH
T ss_pred CCCCCCCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHH
Confidence 2 46999999987642 56778886543 267899999999975432 2233333333321111
Q ss_pred ---------CcccccEEEEc-----ccCCCCCccceeecC---CC--eEEEEEeeecCCC--cceeEEEEehHHHHHHHH
Q 018198 291 ---------GRLIQGVIQID-----ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGA--FSGIGFALPIDTVRGIVD 349 (359)
Q Consensus 291 ---------~~~~~~~i~~~-----~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~ 349 (359)
......+++.. ...|.|+|||||+-. +| .++||.+++..+. ...-+.+..+...++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~ 236 (242)
T 3tvj_B 157 AYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIE 236 (242)
T ss_dssp HHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHH
T ss_pred hhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHH
Confidence 01223567763 467899999999853 33 4999999984222 122366778888888888
Q ss_pred HHHh
Q 018198 350 QLVK 353 (359)
Q Consensus 350 ~l~~ 353 (359)
+.++
T Consensus 237 ~~i~ 240 (242)
T 3tvj_B 237 NIIS 240 (242)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7765
No 93
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.49 E-value=1.8e-12 Score=118.29 Aligned_cols=185 Identities=17% Similarity=0.149 Sum_probs=116.3
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
-.|.+|.|......... ...|+|.+|+++ ||||+|||+.+. ..+.|.+.. +..+..+-+..
T Consensus 34 ~~Pw~v~l~~~~~~~~~------~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 106 (276)
T 2jde_A 34 NQPWFAAIYRRHRGGSV------TYVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLIL 106 (276)
T ss_dssp GSTTEEEEEEECCCCCE------EEEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEE
T ss_pred CCCeEEEEEEecCCCcc------ceeeeeEEeeCC-EEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEE
Confidence 46888888654322110 236999999987 999999999653 356676632 22344444444
Q ss_pred cC---------CCCEEEEEEcCC-------CCCccceEecCC-CCCCCCCEEEEEecCCCCC------CceeEeEEeeee
Q 018198 230 DQ---------VNDLAVLHIDAP-------NHELRPIHVSVS-ADLRVGKKIYAIGHPLGWS------FTCTTGVISALD 286 (359)
Q Consensus 230 d~---------~~DlAll~v~~~-------~~~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~ 286 (359)
++ .+|||||+++.+ ...+.++.|... ..+..|+.+++.||..... ..+....+..+.
T Consensus 107 hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~ 186 (276)
T 2jde_A 107 HKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLIS 186 (276)
T ss_dssp CTTCEECSSCEESCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEEC
T ss_pred CCCCCCCCCcCCCcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccC
Confidence 43 259999999875 124667777543 3567899999999975321 223333333332
Q ss_pred cccC-------CcccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHH
Q 018198 287 REIP-------GRLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQ 350 (359)
Q Consensus 287 ~~~~-------~~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~ 350 (359)
...+ ......+++.. ...|.|+|||||+-. +| .++||++++..-. ...-+.+..+...+.|+++
T Consensus 187 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~ 266 (276)
T 2jde_A 187 HRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRS 266 (276)
T ss_dssp HHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHH
T ss_pred hHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 2111 11223566663 367899999999953 44 5999999986322 1234667788888888887
Q ss_pred HHh
Q 018198 351 LVK 353 (359)
Q Consensus 351 l~~ 353 (359)
.++
T Consensus 267 ~~~ 269 (276)
T 2jde_A 267 HTK 269 (276)
T ss_dssp TC-
T ss_pred Hhh
Confidence 654
No 94
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.49 E-value=1.8e-12 Score=118.59 Aligned_cols=185 Identities=18% Similarity=0.230 Sum_probs=114.3
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC------CeEEEEecC----------------
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA------STVKVSFSD---------------- 218 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~------~~~~v~~~~---------------- 218 (359)
...|..|.|........ ....|+|.+|+++ ||||+|||+.+. ....|++..
T Consensus 32 ~~~Pw~v~l~~~~~~~~------~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~ 104 (278)
T 2olg_A 32 EEFPWTAMIGYKNSSNF------EQFACGGSLINNR-YIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVC 104 (278)
T ss_dssp TSSTTEEEEEEECTTCC------EEEEEEEEECSSS-EEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEE
T ss_pred CCCCceEEEEEecCCCC------cceeEEEEEEeCC-EEEEhHHhCCCcccccccceeEEEeCcccCCCCcccccccccc
Confidence 34688888875421110 1236999999987 999999999752 345666632
Q ss_pred ----CcEEEEEEEEEcC---------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC----Cce
Q 018198 219 ----QSTFYAQVVGHDQ---------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS----FTC 277 (359)
Q Consensus 219 ----g~~~~~~v~~~d~---------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~----~~~ 277 (359)
...+..+-+..++ .+|||||+++.+.. .+.|+.|.... .+..|+.+++.||..... ..+
T Consensus 105 ~~~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l 184 (278)
T 2olg_A 105 VPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIK 184 (278)
T ss_dssp CSSCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBC
T ss_pred CCCCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchh
Confidence 1123333333332 47999999987543 46777776443 467899999999975322 222
Q ss_pred eEeEEeeeecccCC--------cccccEEEEc----ccCCCCCccceeecC--CC--eEEEEEeeecCCCc-ceeEEEEe
Q 018198 278 TTGVISALDREIPG--------RLIQGVIQID----ASVNLGNSGGPLLDS--SG--SLIGVNTFITSGAF-SGIGFALP 340 (359)
Q Consensus 278 ~~G~vs~~~~~~~~--------~~~~~~i~~~----~~~~~G~SGgPl~~~--~G--~viGi~~~~~~~~~-~~~~~aip 340 (359)
....+..+....+. .....+++.. ...|.|||||||+-. +| .++||+|++..-+. ..-+...-
T Consensus 185 ~~~~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~ 264 (278)
T 2olg_A 185 QKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTK 264 (278)
T ss_dssp EEEEEEBCCGGGGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEE
T ss_pred hcccccccCHHHHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeE
Confidence 33333333222111 1223566663 357899999999953 34 69999999852221 12356677
Q ss_pred hHHHHHHHHHHH
Q 018198 341 IDTVRGIVDQLV 352 (359)
Q Consensus 341 ~~~i~~~l~~l~ 352 (359)
+...+.|+++.+
T Consensus 265 V~~y~~WI~~~i 276 (278)
T 2olg_A 265 VGKYRDWIEGNI 276 (278)
T ss_dssp GGGGHHHHHTTC
T ss_pred HHHHHHHHHHhh
Confidence 888888877643
No 95
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.49 E-value=1.6e-12 Score=117.47 Aligned_cols=181 Identities=17% Similarity=0.158 Sum_probs=114.6
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC---CCeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG---ASTVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~---~~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
-.|.+|.|.... ...|+|.+|+++ ||||+|||+.+ ...+.|++.. ...+..+-+..
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~ 78 (261)
T 3gyl_B 11 QWPWQVSITYEG-----------VHVCGGSLVSEQ-WVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIP 78 (261)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEECSSS-EEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEE
T ss_pred CCCcEEEEeeCC-----------ceEEEEEEEcCC-EEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEE
Confidence 357788886421 237999999987 99999999953 2356677642 12344444455
Q ss_pred cCC-------CCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCC-------CCceeEeEEeeeecccC-
Q 018198 230 DQV-------NDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGW-------SFTCTTGVISALDREIP- 290 (359)
Q Consensus 230 d~~-------~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~-------~~~~~~G~vs~~~~~~~- 290 (359)
++. +|||||+++.+.. .+.++.|... ..+..|+.+++.||.... ...+....+..+....+
T Consensus 79 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~ 158 (261)
T 3gyl_B 79 HPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCN 158 (261)
T ss_dssp CTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHH
T ss_pred CCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhh
Confidence 543 5999999987543 4667777543 345689999999997532 12233333333321111
Q ss_pred ------------CcccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHH
Q 018198 291 ------------GRLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVD 349 (359)
Q Consensus 291 ------------~~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~ 349 (359)
......+++.. ...|.|+|||||+.. +| .++||.+++..-+ ...-+.+..+...+.|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~ 238 (261)
T 3gyl_B 159 SLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQ 238 (261)
T ss_dssp HHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHH
T ss_pred hhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHH
Confidence 11223566663 357899999999954 45 6999999985321 122456777888888887
Q ss_pred HHHhc
Q 018198 350 QLVKF 354 (359)
Q Consensus 350 ~l~~~ 354 (359)
+.++.
T Consensus 239 ~~i~~ 243 (261)
T 3gyl_B 239 SKVTE 243 (261)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 76653
No 96
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.49 E-value=1.9e-15 Score=147.04 Aligned_cols=111 Identities=15% Similarity=0.131 Sum_probs=91.7
Q ss_pred CCCccccccccCCcEEEeeecccccCCcceeeeeeeeccccce-------------------eeEEEEeecCCCCccchh
Q 018198 1 MSPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQ-------------------RHTISVFVGDESGILSRI 61 (359)
Q Consensus 1 ~~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~-------------------~~~l~~~~~~~G~~lsp~ 61 (359)
++|++++|+++|+|++++|+|||++||||+++|++++++...+ .+.........|+.++|+
T Consensus 207 ~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~ 286 (430)
T 3ri6_A 207 TPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPH 286 (430)
T ss_dssp SCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHH
T ss_pred cccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHH
Confidence 4688899999999999999999999999999999996554221 101112345689999999
Q ss_pred hhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeecc-CCCCCCC
Q 018198 62 DGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQ-SSSSSLE 125 (359)
Q Consensus 62 ~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~-~~~~~~e 125 (359)
++|+.+||++++.+|+ +++ .+++++++++|++++.|.+|.|.. .+++..+
T Consensus 287 ~a~l~l~~l~~l~~r~-----~~~---------~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~ 337 (430)
T 3ri6_A 287 NAYLQSLGLETMALRI-----ERS---------CQNAQELAHWLLSIPQVKCVNHPSLPDSPFYA 337 (430)
T ss_dssp HHHHHHHHHHHHHHHH-----HHH---------HHHHHHHHHHHTTCTTCEEEECTTSTTSTTHH
T ss_pred HHHHHHhhhhhHHHHH-----HHH---------HHHHHHHHHHHhCCCCccEEECCCCCCCccHH
Confidence 9999999999999999 888 999999999999999999999863 4444443
No 97
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.48 E-value=3.9e-12 Score=114.18 Aligned_cols=181 Identities=18% Similarity=0.210 Sum_probs=114.7
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ 231 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~ 231 (359)
...|.+|.|.... ....|+|.+|+++ ||||+|||+.+. ...|.+.. ...+...-+..++
T Consensus 25 ~~~Pw~v~l~~~~----------~~~~CgGtLI~~~-~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp 92 (245)
T 1t8o_A 25 GSWPWQVSLQDKT----------GFHFCGGSLINEN-WVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNS 92 (245)
T ss_dssp TSSTTEEEEECTT----------CCEEEEEEEEETT-EEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECT
T ss_pred CCCCceEEEEcCC----------CCeEEEEEEeeCC-EEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCC
Confidence 3457888886421 1236999999987 999999999763 34455421 2234444444443
Q ss_pred -------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC------CCceeEeEEeeeecccC----
Q 018198 232 -------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW------SFTCTTGVISALDREIP---- 290 (359)
Q Consensus 232 -------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~~~~~---- 290 (359)
.+|||||+++.+.. .+.|+.|.... .+..|+.+++.||.... ...+....+..+....+
T Consensus 93 ~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 172 (245)
T 1t8o_A 93 KYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYW 172 (245)
T ss_dssp TCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhh
Confidence 46999999987643 46677775432 45689999999997532 12233333333322111
Q ss_pred -CcccccEEEEc---ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 291 -GRLIQGVIQID---ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 291 -~~~~~~~i~~~---~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
......+++.. ...|.|+|||||+.. +| .++||++++..-. ...-+....+...++|+++.++
T Consensus 173 ~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 173 GTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp GGGCCTTEEEEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred cCcCCCceEEccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 11123456653 357899999999954 34 7999999986321 1234667788888888888765
No 98
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.48 E-value=3.5e-13 Score=120.55 Aligned_cols=184 Identities=19% Similarity=0.212 Sum_probs=114.8
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC--cEE---------EEEEEEEc
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ--STF---------YAQVVGHD 230 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g--~~~---------~~~v~~~d 230 (359)
..|.+|.|..... .. ....|+|.+|+++ ||||+|||+.+...+.|++..- ... ..+-+..+
T Consensus 9 ~~Pw~v~l~~~~~-~~------~~~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~H 80 (240)
T 1fon_A 9 SWSWQVSLQYEKD-GA------FHHTCGGSLIAPD-WVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVH 80 (240)
T ss_dssp CEEEEEEEEEEET-TE------EEEEECCEEEETT-EEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEEC
T ss_pred CcccEEEEEEecC-Cc------EeeEEEEEEeeCC-EEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEEC
Confidence 4577888875321 10 0237999999987 9999999998877777776321 111 11112223
Q ss_pred C-------C--CCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC--
Q 018198 231 Q-------V--NDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP-- 290 (359)
Q Consensus 231 ~-------~--~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~-- 290 (359)
+ . +|||||+++.+.. .+.++.|.... .+..|+.+++.||..... ..+....+..+....+
T Consensus 81 p~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 160 (240)
T 1fon_A 81 PLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQ 160 (240)
T ss_dssp TTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTS
T ss_pred CCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhcc
Confidence 2 2 8999999987642 46777776443 456899999999975321 2233333322221111
Q ss_pred ----C-cccccEEEEc---ccCCCCCccceeecC--CC--eEEEEEeeec-CCCc--ceeEEEEehHHHHHHHHHHHh
Q 018198 291 ----G-RLIQGVIQID---ASVNLGNSGGPLLDS--SG--SLIGVNTFIT-SGAF--SGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 291 ----~-~~~~~~i~~~---~~~~~G~SGgPl~~~--~G--~viGi~~~~~-~~~~--~~~~~aip~~~i~~~l~~l~~ 353 (359)
+ .....+++.. ...|.|+|||||+-. +| .++||.+++. .+.. ..-+....+...+.++++.++
T Consensus 161 ~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 238 (240)
T 1fon_A 161 WDWWGITVKKTMVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIA 238 (240)
T ss_dssp TTTTGGGCCTTEEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred ceecCCccccceEeecCCCCcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHh
Confidence 1 1123456654 357899999999843 56 8999999975 1221 234667788888888888765
No 99
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.48 E-value=1e-12 Score=117.60 Aligned_cols=182 Identities=19% Similarity=0.171 Sum_probs=116.6
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCC---------cEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ---------STFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g---------~~~~~~v~~~d~- 231 (359)
..|.+|.|.... ....|+|.+|+++ ||||+|||+.+...+.|++... ..+..+.+..++
T Consensus 11 ~~Pw~v~l~~~~----------~~~~CgGtLIs~~-~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (241)
T 2jkh_A 11 ECPWQALLINEE----------NEGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNR 79 (241)
T ss_dssp SSTTEEEEECTT----------SCEEEEEEECSSS-EEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTT
T ss_pred CcCcEEEEEcCC----------CCcEEEEEEeeCC-EEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCC
Confidence 357777775311 1237999999987 9999999998777777877431 234444444443
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCC----CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC---
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSA----DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP--- 290 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~----~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~--- 290 (359)
.+|||||+++.+.. .+.|+.|.... .+..++.+++.||..... ..+....+..+....+
T Consensus 80 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 159 (241)
T 2jkh_A 80 FTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLS 159 (241)
T ss_dssp CBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHH
T ss_pred CCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhccc
Confidence 35999999987643 45677775322 245789999999975321 2233333333322111
Q ss_pred --CcccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHhc
Q 018198 291 --GRLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 291 --~~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
......+++.. ...|.|+|||||+.. +| .++||.+++..-. ...-+.+..+...+.|+++.++.
T Consensus 160 ~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (241)
T 2jkh_A 160 SSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT 234 (241)
T ss_dssp CSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred ccCcCCCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhcc
Confidence 11223566663 357899999999954 45 5999999986321 12346678888899999887664
No 100
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.48 E-value=4.4e-12 Score=113.95 Aligned_cols=183 Identities=14% Similarity=0.156 Sum_probs=115.8
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecCC---------cEEEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSDQ---------STFYAQVVG 228 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~g---------~~~~~~v~~ 228 (359)
...|..|.|.... ....|+|.+|+++ ||||+|||+.+. ..+.|.+... +.+...-+.
T Consensus 27 ~~~Pw~v~l~~~~----------~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~ 95 (247)
T 1ddj_A 27 HSWPWQVSLRTRF----------GMHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLF 95 (247)
T ss_dssp TSSTTEEEEECTT----------SCEEEEEEEEETT-EEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred CCCCcEEEEEcCC----------CCeEEEEEEeeCC-EEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEE
Confidence 3467888886421 1237999999987 999999999753 3466666321 223333333
Q ss_pred Ec-CCCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCCC----CceeEeEEeeeecccC-------Cc
Q 018198 229 HD-QVNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGWS----FTCTTGVISALDREIP-------GR 292 (359)
Q Consensus 229 ~d-~~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~~----~~~~~G~vs~~~~~~~-------~~ 292 (359)
.+ ..+|||||+++.+.. .+.|+.|.... .+..++.+++.||..... ..+....+..+....+ ..
T Consensus 96 ~hp~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 175 (247)
T 1ddj_A 96 LEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGR 175 (247)
T ss_dssp ECTTSCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTC
T ss_pred cCCCCCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCC
Confidence 34 468999999987642 46677775432 356789999999975421 2233333333321111 11
Q ss_pred ccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHHhc
Q 018198 293 LIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 293 ~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~~~ 354 (359)
....+++.. ...|.|+|||||+-. +| .++||.+++..-.. ..-+....+...+.|+++.++.
T Consensus 176 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 246 (247)
T 1ddj_A 176 VQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRN 246 (247)
T ss_dssp CCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHHT
T ss_pred CcCCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhhc
Confidence 223566663 357899999999953 33 69999999863211 2235677788888888887753
No 101
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.48 E-value=7.4e-13 Score=118.51 Aligned_cols=166 Identities=16% Similarity=0.189 Sum_probs=106.1
Q ss_pred eEEEEEEeCCCEEEecccccCC-------CCeEEEEecCC--------cEEEEEEEEEcC----------CCCEEEEEEc
Q 018198 187 SGAGFLWDQDGHIVTNYHVICG-------ASTVKVSFSDQ--------STFYAQVVGHDQ----------VNDLAVLHID 241 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~-------~~~~~v~~~~g--------~~~~~~v~~~d~----------~~DlAll~v~ 241 (359)
.|+|.+|+++ ||||+|||+.. ...+.|.+... ..+..+-+..++ .+|||||+++
T Consensus 23 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~ 101 (242)
T 2qy0_B 23 RGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELE 101 (242)
T ss_dssp EEEEEEETTT-EEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEEES
T ss_pred CEEEEEEeCC-EEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEEEC
Confidence 6999999987 99999999963 23456666432 122333333333 3499999998
Q ss_pred CCCC---CccceEecCCCC-CCCCCEEEEEecCCCCC---CceeEeEEeeeecccC----------CcccccEEEEc---
Q 018198 242 APNH---ELRPIHVSVSAD-LRVGKKIYAIGHPLGWS---FTCTTGVISALDREIP----------GRLIQGVIQID--- 301 (359)
Q Consensus 242 ~~~~---~~~~~~l~~~~~-~~~G~~v~~iG~p~~~~---~~~~~G~vs~~~~~~~----------~~~~~~~i~~~--- 301 (359)
.+.. .+.|+.|..... +..|+.+++.||..... ..+....+..+....+ ......+++..
T Consensus 102 ~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~ 181 (242)
T 2qy0_B 102 NSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPS 181 (242)
T ss_dssp SCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTT
T ss_pred CCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCCC
Confidence 7643 467777764332 46799999999975432 2233333333321111 01123567763
Q ss_pred --ccCCCCCccceeecCCC-----eEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 302 --ASVNLGNSGGPLLDSSG-----SLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 302 --~~~~~G~SGgPl~~~~G-----~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
...|.|+|||||+-.++ .++||++++..-. .+.+.+..+...++|+++.++.
T Consensus 182 ~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~-~~~~vyt~V~~y~~WI~~~~~~ 240 (242)
T 2qy0_B 182 LKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS-RGYGFYTKVLNYVDWIKKEMEE 240 (242)
T ss_dssp CCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSS-SSCEEEEEGGGGHHHHHHHTTC
T ss_pred CCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcC-CCCcEEEEHHHHHHHHHHHhhc
Confidence 35789999999995322 5999999986322 2346778888899999887653
No 102
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.47 E-value=2.3e-12 Score=118.17 Aligned_cols=181 Identities=16% Similarity=0.168 Sum_probs=116.7
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVG 228 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~ 228 (359)
...|.+|.|... ...|+|.+|+++ ||||+|||+.+. ..+.|++.. ...+..+-+.
T Consensus 45 ~~~Pw~v~l~~~------------~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~ 111 (283)
T 1yc0_A 45 GSHPWLAAIYIG------------DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYI 111 (283)
T ss_dssp TSSTTEEEEEET------------TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEE
T ss_pred CCCCeEEEEEcC------------CcEEEEEEeeCC-EEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEE
Confidence 345788888541 136999999987 999999999764 467777742 1233333333
Q ss_pred Ec--------CCCCEEEEEEcCC----C---CCccceEecCC-CCCCCCCEEEEEecCCCC------CCceeEeEEeeee
Q 018198 229 HD--------QVNDLAVLHIDAP----N---HELRPIHVSVS-ADLRVGKKIYAIGHPLGW------SFTCTTGVISALD 286 (359)
Q Consensus 229 ~d--------~~~DlAll~v~~~----~---~~~~~~~l~~~-~~~~~G~~v~~iG~p~~~------~~~~~~G~vs~~~ 286 (359)
.+ ..+|||||+++.+ . ..+.++.|... ..+..|+.+++.||.... ...+....+..+.
T Consensus 112 ~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~ 191 (283)
T 1yc0_A 112 PYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVA 191 (283)
T ss_dssp ECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCC
T ss_pred ecCccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEEC
Confidence 33 2469999999875 1 24677777543 345689999999997532 2233444444333
Q ss_pred cccC------C-cccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHH
Q 018198 287 REIP------G-RLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQ 350 (359)
Q Consensus 287 ~~~~------~-~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~ 350 (359)
...+ + .....+++.. ...|.|+|||||+.. +| .++||++++..-. ...-+.+..+...+.|+++
T Consensus 192 ~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~ 271 (283)
T 1yc0_A 192 DHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWIND 271 (283)
T ss_dssp HHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHH
T ss_pred HHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHH
Confidence 2111 1 1123567763 357899999999954 45 5999999986221 1234667788888888888
Q ss_pred HHhc
Q 018198 351 LVKF 354 (359)
Q Consensus 351 l~~~ 354 (359)
.++.
T Consensus 272 ~i~~ 275 (283)
T 1yc0_A 272 RIRP 275 (283)
T ss_dssp HCC-
T ss_pred HhcC
Confidence 7654
No 103
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.47 E-value=1.7e-12 Score=116.46 Aligned_cols=184 Identities=15% Similarity=0.155 Sum_probs=115.7
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC----CCeEEEEecC------CcEEEEEEEEEcC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG----ASTVKVSFSD------QSTFYAQVVGHDQ 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~----~~~~~v~~~~------g~~~~~~v~~~d~ 231 (359)
..|.+|.|..... . ....|+|.+|+++ ||||+|||+.. ...+.|.+.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~~~--~------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp 81 (245)
T 2f9n_A 11 KWPWQVSLRVRDR--Y------WMHFCGGSLIHPQ-WVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHP 81 (245)
T ss_dssp SCTTEEEEEEESS--S------EEEEEEEEEEETT-EEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECT
T ss_pred CCCcEEEEEEcCC--C------cceEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECC
Confidence 4578888865321 0 0236999999987 99999999953 2456777643 2234444444444
Q ss_pred -------CCCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCCC-------CceeEeEEeeeecccC---
Q 018198 232 -------VNDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGWS-------FTCTTGVISALDREIP--- 290 (359)
Q Consensus 232 -------~~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~-------~~~~~G~vs~~~~~~~--- 290 (359)
.+|||||+++.+.. .+.++.|... ..+..|+.+++.||..... ..+....+..+....+
T Consensus 82 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (245)
T 2f9n_A 82 QFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAK 161 (245)
T ss_dssp TCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHH
T ss_pred CccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhh
Confidence 35999999987643 4677777643 3456899999999975321 1223332222221110
Q ss_pred -----------CcccccEEEEc---ccCCCCCccceeecC-CC--eEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHH
Q 018198 291 -----------GRLIQGVIQID---ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 291 -----------~~~~~~~i~~~---~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~ 352 (359)
......+++.. ...|.|+|||||+-. +| .++||.+++..-.. ..-+...-+...++|+++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 241 (245)
T 2f9n_A 162 YHLGAYTGDDVRIIRDDMLCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241 (245)
T ss_dssp HHTTCCSCTTSCCSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHS
T ss_pred hcccccccccccccccccEeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 01123456653 357899999999954 56 69999999863211 22366778888889988876
Q ss_pred hc
Q 018198 353 KF 354 (359)
Q Consensus 353 ~~ 354 (359)
+.
T Consensus 242 ~~ 243 (245)
T 2f9n_A 242 PK 243 (245)
T ss_dssp CC
T ss_pred hc
Confidence 53
No 104
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.47 E-value=1.7e-12 Score=115.61 Aligned_cols=179 Identities=18% Similarity=0.172 Sum_probs=112.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC----CeEEEEecC----------CcEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA----STVKVSFSD----------QSTFYAQVV 227 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~----~~~~v~~~~----------g~~~~~~v~ 227 (359)
..|.+|.|.... ...|+|.+|+++ ||||+|||+.+. ..+.+.+.. ......+-+
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i 78 (235)
T 4dgj_A 11 AWPWVVGLYYDD-----------RLLCGASLVSSD-WLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEI 78 (235)
T ss_dssp SSTTEEEEEETT-----------EEEEEEEECSSS-EEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEE
T ss_pred CCCcEEEEeeCC-----------CeEEEEEEeeCC-EEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEE
Confidence 457788886421 237999999987 999999999542 345666531 122334444
Q ss_pred EEcCC-------CCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecccC-
Q 018198 228 GHDQV-------NDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDREIP- 290 (359)
Q Consensus 228 ~~d~~-------~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~~~- 290 (359)
..+++ +|||||+++.+.. .+.++.|.... .+..|+.+++.||.... ...+....+..+....+
T Consensus 79 ~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~ 158 (235)
T 4dgj_A 79 VINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQ 158 (235)
T ss_dssp EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHH
T ss_pred EECCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhh
Confidence 45543 6999999987542 46677776433 35689999999997421 12233333333321111
Q ss_pred ----C-cccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHH
Q 018198 291 ----G-RLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 291 ----~-~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~ 352 (359)
. .....+++.. ...|.|+|||||+-. +| .++||.+++..-. ...-+.+..+...++|+++.+
T Consensus 159 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~i 234 (235)
T 4dgj_A 159 QQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSFL 234 (235)
T ss_dssp HHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTC
T ss_pred hhccCccCCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHHh
Confidence 1 1223566663 257899999999954 34 4999999986322 122456777888888887654
No 105
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=99.46 E-value=1.7e-13 Score=114.40 Aligned_cols=114 Identities=31% Similarity=0.428 Sum_probs=96.4
Q ss_pred eeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc-CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeecc-CC
Q 018198 43 QRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN-KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQ-SS 120 (359)
Q Consensus 43 ~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~-~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~-~~ 120 (359)
|+|.+..+++|..|+|+++.+.|..||+|+.++.+++++ ++.+|||+++.++++.++||.+||+|+++|.+|.++. .+
T Consensus 3 m~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~~~leql~kQL~Kl~dV~~V~~~~~~~ 82 (165)
T 2pc6_A 3 MRHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKLIDLSSEG 82 (165)
T ss_dssp EEEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEEEEGGGSC
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccHHHHHHHHHHhcCCCCEEEEEEcCCcc
Confidence 457899999999999999999999999999999998766 6789999999999999999999999999999999984 68
Q ss_pred CCCCCcccccCCCCCCCCCCCCCCCCCCchhhhhHHHhhhcCCCeeEEEE
Q 018198 121 SSSLEPFFLPCSGVDSTPDFVGSQPCKLQMDELETIRIFEENISSVVWIG 170 (359)
Q Consensus 121 ~~~~el~li~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~svV~I~ 170 (359)
+..||++|+|+.+. ......+.++++..+..+|-+.
T Consensus 83 ~v~rEl~liKv~~~--------------~~~r~~i~~~~~~fra~ivdv~ 118 (165)
T 2pc6_A 83 YVERELMLVKVRAV--------------GKDREEMKRLADIFRGNIIDVT 118 (165)
T ss_dssp EEEEEEEEEEEECC--------------THHHHHHHHHHHHTTCEEEEEE
T ss_pred eeeeEEEEEEEeCC--------------cccHHHHHHHHHHcCCEEEEEc
Confidence 99999999999741 1223445556666666666554
No 106
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.45 E-value=1.6e-12 Score=122.69 Aligned_cols=182 Identities=11% Similarity=0.091 Sum_probs=117.8
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC-----------eEEEEecCCcEEEEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS-----------TVKVSFSDQSTFYAQVVGH 229 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~-----------~~~v~~~~g~~~~~~v~~~ 229 (359)
..-|..|.|.... ...+.|.+|+++ ||||||||+.... .........+.+..+-+..
T Consensus 112 g~~Pw~v~l~~~~-----------~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~ 179 (347)
T 4f4o_C 112 GSFPWQAKMISHH-----------NLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIF 179 (347)
T ss_dssp CCCTTCEEEECTT-----------CCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEE
T ss_pred CCCCcEEEEEeCC-----------CEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEE
Confidence 3457777775321 237999999987 9999999996321 2334444445555555556
Q ss_pred cC---CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC----CceeEeEEeeeecccC---------
Q 018198 230 DQ---VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS----FTCTTGVISALDREIP--------- 290 (359)
Q Consensus 230 d~---~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~----~~~~~G~vs~~~~~~~--------- 290 (359)
++ .+|||||+++.+.. .+.|+.|........|...++.||..... ..+....+..+.....
T Consensus 180 HP~y~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~ 259 (347)
T 4f4o_C 180 HPDNSTVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTV 259 (347)
T ss_dssp CSCTTTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSS
T ss_pred CcCCCCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccc
Confidence 65 45999999987542 56788887666778899999999975422 2233333333321100
Q ss_pred -------------CcccccEEEEc-----ccCCCCCccceeec---CCC--eEEEEEeeecCCCcceeEEEEehHHHHHH
Q 018198 291 -------------GRLIQGVIQID-----ASVNLGNSGGPLLD---SSG--SLIGVNTFITSGAFSGIGFALPIDTVRGI 347 (359)
Q Consensus 291 -------------~~~~~~~i~~~-----~~~~~G~SGgPl~~---~~G--~viGi~~~~~~~~~~~~~~aip~~~i~~~ 347 (359)
.....++++.. ...|.|||||||+- .+| .++||+|++..-+...-+.+.-+...+.|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~W 339 (347)
T 4f4o_C 260 PEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDW 339 (347)
T ss_dssp GGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTTTSSCEEEEEHHHHHHH
T ss_pred cccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCCCCCCeEEEEHHHHHHH
Confidence 01123456652 35788999999972 234 39999999863222234667788999999
Q ss_pred HHHHHhc
Q 018198 348 VDQLVKF 354 (359)
Q Consensus 348 l~~l~~~ 354 (359)
+++.+++
T Consensus 340 I~~~i~~ 346 (347)
T 4f4o_C 340 IQTTIAD 346 (347)
T ss_dssp HHHHHTC
T ss_pred HHHHHHc
Confidence 9987764
No 107
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.45 E-value=9e-12 Score=114.74 Aligned_cols=186 Identities=15% Similarity=0.167 Sum_probs=114.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC--------------CcEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD--------------QSTFYA 224 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~--------------g~~~~~ 224 (359)
..|.+|.|........ .....|.|.+|+++ ||||+|||+... ..+.|.+.. ...+..
T Consensus 11 ~~Pw~v~l~~~~~~~~-----~~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V 84 (290)
T 1fiw_A 11 AWPWMVSLQIFTYHNN-----RRYHVCGGSLLNSQ-WLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYV 84 (290)
T ss_dssp SSTTEEEEEEEETTTT-----EEEEEEEEEEEETT-EEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEE
T ss_pred CCCcEEEEEEeccCCC-----ccceEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEE
Confidence 4578888865321111 01236999999987 999999999653 346666532 122334
Q ss_pred EEEEEcC-------CCCEEEEEEcCCCC---CccceEecCCC--CCCCCCEEEEEecCCCCC------CceeEeEEeeee
Q 018198 225 QVVGHDQ-------VNDLAVLHIDAPNH---ELRPIHVSVSA--DLRVGKKIYAIGHPLGWS------FTCTTGVISALD 286 (359)
Q Consensus 225 ~v~~~d~-------~~DlAll~v~~~~~---~~~~~~l~~~~--~~~~G~~v~~iG~p~~~~------~~~~~G~vs~~~ 286 (359)
+-+..++ .+|||||+++.+.. .+.++.|.... ....|+.+++.||..... ..+....+..+.
T Consensus 85 ~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~ 164 (290)
T 1fiw_A 85 EKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLID 164 (290)
T ss_dssp EEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEEC
T ss_pred EEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEec
Confidence 4444443 36999999987643 46677775432 235689999999975321 223444443333
Q ss_pred cccC-------CcccccEEEEc-----ccCCCCCccceeecCC---C--eEEEEEeeecCCCc-ceeEEEEehHHHHHHH
Q 018198 287 REIP-------GRLIQGVIQID-----ASVNLGNSGGPLLDSS---G--SLIGVNTFITSGAF-SGIGFALPIDTVRGIV 348 (359)
Q Consensus 287 ~~~~-------~~~~~~~i~~~-----~~~~~G~SGgPl~~~~---G--~viGi~~~~~~~~~-~~~~~aip~~~i~~~l 348 (359)
...+ ......+++.. ...|.|||||||+-.+ | .++||++++..-.. ..-+...-+...++++
T Consensus 165 ~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI 244 (290)
T 1fiw_A 165 LGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWI 244 (290)
T ss_dssp HHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHH
T ss_pred HHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHH
Confidence 2111 11223567764 3678999999999532 3 69999999862211 1235566677788888
Q ss_pred HHHHh
Q 018198 349 DQLVK 353 (359)
Q Consensus 349 ~~l~~ 353 (359)
++.++
T Consensus 245 ~~~~~ 249 (290)
T 1fiw_A 245 ASKIG 249 (290)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 77654
No 108
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.45 E-value=2.3e-12 Score=118.58 Aligned_cols=182 Identities=13% Similarity=0.133 Sum_probs=112.7
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC--------CCeEEEEecCC----------cEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG--------ASTVKVSFSDQ----------STFY 223 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~--------~~~~~v~~~~g----------~~~~ 223 (359)
..|..|.|.... . ....|.|.+|+++ ||||+|||+.. ...+.|++... +.+.
T Consensus 41 ~~Pw~v~l~~~~--~-------~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~ 110 (289)
T 2bdy_A 41 MSPWQVMLFRKS--P-------QELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM 110 (289)
T ss_dssp SCTTEEEEEETT--T-------TEEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEE
T ss_pred CCCCeEEEEECC--C-------CCEEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeee
Confidence 357778775321 0 1237999999987 99999999842 34567777421 1233
Q ss_pred EEEEEEcC--------CCCEEEEEEcCCCC---CccceEecCCCC----CCCCCEEEEEecCCCCC-----------Cce
Q 018198 224 AQVVGHDQ--------VNDLAVLHIDAPNH---ELRPIHVSVSAD----LRVGKKIYAIGHPLGWS-----------FTC 277 (359)
Q Consensus 224 ~~v~~~d~--------~~DlAll~v~~~~~---~~~~~~l~~~~~----~~~G~~v~~iG~p~~~~-----------~~~ 277 (359)
.+-+..++ .+|||||+++.+.. .+.|+.|..... +..|..+++.||..... ..+
T Consensus 111 v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L 190 (289)
T 2bdy_A 111 LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL 190 (289)
T ss_dssp EEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBC
T ss_pred eEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccc
Confidence 33333332 35999999987643 466777753221 46799999999975321 123
Q ss_pred eEeEEeeeecccC-----CcccccEEEEc--------ccCCCCCccceeecC---CC--eEEEEEeeecCCC-cceeEEE
Q 018198 278 TTGVISALDREIP-----GRLIQGVIQID--------ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGA-FSGIGFA 338 (359)
Q Consensus 278 ~~G~vs~~~~~~~-----~~~~~~~i~~~--------~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~-~~~~~~a 338 (359)
....+..+....+ ......+++.. ...|.|||||||+-. +| .++||+|++..-. ...-+..
T Consensus 191 ~~~~v~i~~~~~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vy 270 (289)
T 2bdy_A 191 QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY 270 (289)
T ss_dssp EEEEEEBCCHHHHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEE
T ss_pred eEEEEEEECHHHhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEE
Confidence 3333333321111 11223567763 357999999999843 33 5999999986221 1223567
Q ss_pred EehHHHHHHHHHHHh
Q 018198 339 LPIDTVRGIVDQLVK 353 (359)
Q Consensus 339 ip~~~i~~~l~~l~~ 353 (359)
.-+...+.|+++.++
T Consensus 271 t~V~~y~~WI~~~i~ 285 (289)
T 2bdy_A 271 THVFRLKKWIQKVID 285 (289)
T ss_dssp EETGGGHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHH
Confidence 778888888887664
No 109
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.44 E-value=2.3e-12 Score=114.77 Aligned_cols=180 Identities=16% Similarity=0.166 Sum_probs=113.5
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
-.|..|.|.... ...|+|.+|+++ ||||+|||+.....+.|.+.. ...+...-+..++
T Consensus 11 ~~Pw~v~l~~~~-----------~~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 78 (235)
T 2wph_S 11 QFPWQVVLNGKV-----------DAFCGGSIVNEK-WIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHN 78 (235)
T ss_dssp SSTTEEEEESSS-----------TTCEEEEEEETT-EEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCeEEEEccCC-----------CeeEEEEEEeCC-EEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCC
Confidence 357778775321 236999999987 999999999877777777742 1233343333332
Q ss_pred --------CCCEEEEEEcCCCC---CccceEecCCCC---CCCCCEEEEEecCCCCC-----CceeEeEEeeeeccc---
Q 018198 232 --------VNDLAVLHIDAPNH---ELRPIHVSVSAD---LRVGKKIYAIGHPLGWS-----FTCTTGVISALDREI--- 289 (359)
Q Consensus 232 --------~~DlAll~v~~~~~---~~~~~~l~~~~~---~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~--- 289 (359)
.+|||||+++.+.. .+.|+.|..... +..++.+++.||..... ..+....+..+....
T Consensus 79 y~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 158 (235)
T 2wph_S 79 FNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLR 158 (235)
T ss_dssp TTSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHH
T ss_pred CcccCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcC
Confidence 35999999987643 456666743221 23578999999974321 123333333332111
Q ss_pred --CCcccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 290 --PGRLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 290 --~~~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
.......+++.. ...|.|+|||||+.. +| .++||.+++..-. ...-+.+..+...++|+++.++
T Consensus 159 ~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 233 (235)
T 2wph_S 159 STKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTK 233 (235)
T ss_dssp TCSSCCCTTEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred cccCCCCCCEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 111223567763 357899999999954 45 5999999986321 1234667788888888887654
No 110
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.44 E-value=3.9e-12 Score=114.71 Aligned_cols=181 Identities=14% Similarity=0.115 Sum_probs=115.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC---eEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS---TVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~---~~~v~~~~---------g~~~~~~v~~~ 229 (359)
..|..|.|... . ...|+|.+|+++ ||||+|||+.+.. .+.|++.. ...+..+-+..
T Consensus 11 ~~Pw~v~l~~~----~-------~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 78 (254)
T 2bz6_H 11 ECPWQVLLLVN----G-------AQLCGGTLINTI-WVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVII 78 (254)
T ss_dssp SSTTEEEEEET----T-------EEEEEEEECSSS-EEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEE
T ss_pred CcCCEEEEEeC----C-------CcEEEEEEecCC-EEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEE
Confidence 45778888631 1 237999999987 9999999997654 37777742 22344444444
Q ss_pred cC-------CCCEEEEEEcCCCC---CccceEecCCC----CCCCCCEEEEEecCCCCC-----CceeEeEEeeeecccC
Q 018198 230 DQ-------VNDLAVLHIDAPNH---ELRPIHVSVSA----DLRVGKKIYAIGHPLGWS-----FTCTTGVISALDREIP 290 (359)
Q Consensus 230 d~-------~~DlAll~v~~~~~---~~~~~~l~~~~----~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~~~~ 290 (359)
++ .+|||||+++.+.. .+.++.|.... .+..++.+++.||..... ..+....+..+....+
T Consensus 79 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C 158 (254)
T 2bz6_H 79 PSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDC 158 (254)
T ss_dssp ETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHH
T ss_pred CCCCCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHH
Confidence 43 46999999987643 45677775322 245689999999974321 2233333333321110
Q ss_pred -----C-----cccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHH
Q 018198 291 -----G-----RLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQL 351 (359)
Q Consensus 291 -----~-----~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l 351 (359)
. .....+++.. ...|.|+|||||+.. +| .++||++++..-. ...-+.+..+...+.|+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 238 (254)
T 2bz6_H 159 LQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKL 238 (254)
T ss_dssp HHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred hhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 0 1223567763 357899999999954 45 5999999986321 12346678888889999887
Q ss_pred Hhc
Q 018198 352 VKF 354 (359)
Q Consensus 352 ~~~ 354 (359)
++.
T Consensus 239 ~~~ 241 (254)
T 2bz6_H 239 MRS 241 (254)
T ss_dssp HTS
T ss_pred Hhc
Confidence 764
No 111
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.44 E-value=3.8e-12 Score=114.75 Aligned_cols=182 Identities=13% Similarity=0.130 Sum_probs=111.3
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccC--------CCCeEEEEecCC---------c-EEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVIC--------GASTVKVSFSDQ---------S-TFY 223 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~--------~~~~~~v~~~~g---------~-~~~ 223 (359)
..|.+|.|..... ....|+|.+|+++ ||||+|||+. ....+.|++... . ...
T Consensus 11 ~~Pw~v~l~~~~~---------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~ 80 (259)
T 3rm2_H 11 MSPWQVMLFRKSP---------QELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM 80 (259)
T ss_dssp SSTTEEEEEEETT---------EEEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEE
T ss_pred CcCCEEEEEECCC---------CceEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeE
Confidence 4577888853221 1236999999987 9999999984 234566776421 1 122
Q ss_pred EEEEEEcC--------CCCEEEEEEcCCCC---CccceEecCCC----CCCCCCEEEEEecCCCCC-----------Cce
Q 018198 224 AQVVGHDQ--------VNDLAVLHIDAPNH---ELRPIHVSVSA----DLRVGKKIYAIGHPLGWS-----------FTC 277 (359)
Q Consensus 224 ~~v~~~d~--------~~DlAll~v~~~~~---~~~~~~l~~~~----~~~~G~~v~~iG~p~~~~-----------~~~ 277 (359)
.+-+..++ .+|||||+++.+.. .+.|+.|.... .+..|..+++.||..... ..+
T Consensus 81 v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l 160 (259)
T 3rm2_H 81 LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL 160 (259)
T ss_dssp EEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBC
T ss_pred EEEEEECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccc
Confidence 33333333 34999999987543 45677775322 135799999999975321 122
Q ss_pred eEeEEeeeecccC-----CcccccEEEEc--------ccCCCCCccceeecC---CC--eEEEEEeeecCCCc-ceeEEE
Q 018198 278 TTGVISALDREIP-----GRLIQGVIQID--------ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGAF-SGIGFA 338 (359)
Q Consensus 278 ~~G~vs~~~~~~~-----~~~~~~~i~~~--------~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~~-~~~~~a 338 (359)
....+..+....+ ......+++.. ...|.|+|||||+-. +| .++||.+++..-.. ..-+.+
T Consensus 161 ~~~~~~~~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vy 240 (259)
T 3rm2_H 161 QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY 240 (259)
T ss_dssp EEEEEEBCCHHHHHHTCSSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEE
T ss_pred eEEEEEEeCHHHhhhhhcccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEE
Confidence 3333332222111 11223567763 268899999999843 23 79999999863221 223567
Q ss_pred EehHHHHHHHHHHHh
Q 018198 339 LPIDTVRGIVDQLVK 353 (359)
Q Consensus 339 ip~~~i~~~l~~l~~ 353 (359)
.-+...++|+++.++
T Consensus 241 t~V~~~~~WI~~~i~ 255 (259)
T 3rm2_H 241 THVFRLKKWIQKVID 255 (259)
T ss_dssp EETGGGHHHHHHHHH
T ss_pred EEHHHhHHHHHHHHH
Confidence 778888888877664
No 112
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.44 E-value=2.4e-12 Score=118.15 Aligned_cols=184 Identities=14% Similarity=0.050 Sum_probs=117.4
Q ss_pred hcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC------CcEEEEEEEEEcC--
Q 018198 160 EENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD------QSTFYAQVVGHDQ-- 231 (359)
Q Consensus 160 ~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~------g~~~~~~v~~~d~-- 231 (359)
....|..|.|.... ....++|.+|+++ ||||+|||+.+...+.|++.. ...+..+-+..++
T Consensus 61 ~~~~Pw~v~l~~~~----------~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y 129 (283)
T 3f1s_B 61 LQDLPWQVKLTNSE----------GKDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRY 129 (283)
T ss_dssp --CCTTEEEEECTT----------SCEEEEEEEEETT-EEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTC
T ss_pred ccccCCEEEEEecC----------CCeeeccEEecCC-EEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCC
Confidence 34578888886421 1237999999987 999999999887778888752 2345555455554
Q ss_pred -----CCCEEEEEEcCCCC---CccceEecCCC----CCCCCCEEEEEecCCCC---CCceeEeEEeeeeccc-----CC
Q 018198 232 -----VNDLAVLHIDAPNH---ELRPIHVSVSA----DLRVGKKIYAIGHPLGW---SFTCTTGVISALDREI-----PG 291 (359)
Q Consensus 232 -----~~DlAll~v~~~~~---~~~~~~l~~~~----~~~~G~~v~~iG~p~~~---~~~~~~G~vs~~~~~~-----~~ 291 (359)
.+|||||+++.+.. .+.|+.|.... .+..|+.+++.||.... ...+....+..+.... ..
T Consensus 130 ~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~ 209 (283)
T 3f1s_B 130 DADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNV 209 (283)
T ss_dssp BTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTS
T ss_pred CCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcC
Confidence 45999999987543 46677775432 45789999999997521 1122333333332111 11
Q ss_pred cccccEEEEcc--cCCCCCccceeecC-CCe--EEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 292 RLIQGVIQIDA--SVNLGNSGGPLLDS-SGS--LIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 292 ~~~~~~i~~~~--~~~~G~SGgPl~~~-~G~--viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
.....+++... ....|+|||||+-. +|+ ++||++++.......-+...-+...+.|+++.++.
T Consensus 210 ~~~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c~~~~~p~vyt~V~~y~~WI~~~~~~ 277 (283)
T 3f1s_B 210 TVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIMNA 277 (283)
T ss_dssp CCCTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCSGGGCSSEEEEEEGGGGHHHHHHHHTC
T ss_pred CCCCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCCCCCCCcceEEEEhHHhHHHHHHHhhc
Confidence 12234566532 23468999999954 555 99999986422222345778888888888887764
No 113
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.43 E-value=9.6e-12 Score=118.57 Aligned_cols=182 Identities=19% Similarity=0.179 Sum_probs=115.1
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC----CCeEEEEecC-------CcEEEEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG----ASTVKVSFSD-------QSTFYAQVVGH 229 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~----~~~~~v~~~~-------g~~~~~~v~~~ 229 (359)
...|..|.|.... ...|.|.+|+++ ||||||||+.. ...+.|.+.. +..+..+-+..
T Consensus 127 ~~~Pw~v~l~~~~-----------~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~ 194 (372)
T 1z8g_A 127 GRWPWQVSLRYDG-----------AHLCGGSLLSGD-WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVY 194 (372)
T ss_dssp TSSTTEEEEEETT-----------EEEEEEEESSSS-EEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEE
T ss_pred CCCCcEEEEEeCC-----------ceEEEEEEecCC-EEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEE
Confidence 3457778876421 236999999987 99999999942 2456776632 22344443444
Q ss_pred cC-------------CCCEEEEEEcCCCC---CccceEecCC-CCCCCCCEEEEEecCCCCC-----CceeEeEEeeeec
Q 018198 230 DQ-------------VNDLAVLHIDAPNH---ELRPIHVSVS-ADLRVGKKIYAIGHPLGWS-----FTCTTGVISALDR 287 (359)
Q Consensus 230 d~-------------~~DlAll~v~~~~~---~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~-----~~~~~G~vs~~~~ 287 (359)
++ .+|||||+++.+.. .+.|+.|... ..+..|+.+++.||..... ..+....+..+..
T Consensus 195 Hp~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~ 274 (372)
T 1z8g_A 195 HGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISN 274 (372)
T ss_dssp ETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECH
T ss_pred CCCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecCh
Confidence 43 34999999987542 4677777643 3456799999999975321 2233333333322
Q ss_pred cc------C-CcccccEEEEc-----ccCCCCCccceeecCC-----C--eEEEEEeeecCCC-cceeEEEEehHHHHHH
Q 018198 288 EI------P-GRLIQGVIQID-----ASVNLGNSGGPLLDSS-----G--SLIGVNTFITSGA-FSGIGFALPIDTVRGI 347 (359)
Q Consensus 288 ~~------~-~~~~~~~i~~~-----~~~~~G~SGgPl~~~~-----G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~ 347 (359)
.. . ......+++.. ...|.|||||||+-.+ | .++||++++..-. ...-+...-+...+.+
T Consensus 275 ~~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~W 354 (372)
T 1z8g_A 275 DVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREW 354 (372)
T ss_dssp HHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHH
T ss_pred HHhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHH
Confidence 11 1 11223567763 3578999999999432 3 6999999986211 1223567778888888
Q ss_pred HHHHHhc
Q 018198 348 VDQLVKF 354 (359)
Q Consensus 348 l~~l~~~ 354 (359)
+++.++.
T Consensus 355 I~~~i~~ 361 (372)
T 1z8g_A 355 IFQAIKT 361 (372)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8776653
No 114
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=99.41 E-value=6.5e-13 Score=110.93 Aligned_cols=114 Identities=32% Similarity=0.402 Sum_probs=95.2
Q ss_pred eeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc-CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeecc-CC
Q 018198 43 QRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN-KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQ-SS 120 (359)
Q Consensus 43 ~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~-~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~-~~ 120 (359)
++|.+..+++|..|+|+++.+.|..||+|+.++.+++.+ ++.+||+++++++++.++||.+||+|+++|.+|.++. .+
T Consensus 2 ~~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~Kl~dV~~V~r~~~~~ 81 (164)
T 2f1f_A 2 ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGA 81 (164)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEGGGSC
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHcCCCCEEEEEEcCCcc
Confidence 357889999999999999999999999999999997766 5789999999999999999999999999999999984 68
Q ss_pred CCCCCcccccCCCCCCCCCCCCCCCCCCchhhhhHHHhhhcCCCeeEEEE
Q 018198 121 SSSLEPFFLPCSGVDSTPDFVGSQPCKLQMDELETIRIFEENISSVVWIG 170 (359)
Q Consensus 121 ~~~~el~li~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~svV~I~ 170 (359)
+..|||+|+|+.+. ......+.++++..+..+|-+.
T Consensus 82 ~v~rEl~liKv~~~--------------~~~r~~i~~~~~~fra~ivdv~ 117 (164)
T 2f1f_A 82 HVEREIMLVKIQAS--------------GYGRDEVKRNTEIFRGQIIDVT 117 (164)
T ss_dssp EEEEEEEEEEEECC--------------THHHHHHHHHHHHTTCEEEEEC
T ss_pred cceeEEEEEEEECC--------------cccHHHHHHHHHHcCCEEEEEC
Confidence 99999999999741 1123445555555555555543
No 115
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.41 E-value=5.1e-12 Score=111.50 Aligned_cols=176 Identities=13% Similarity=0.077 Sum_probs=101.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEe---CCCEEEecccccCCC------CeEEEEec--CC----cEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWD---QDGHIVTNYHVICGA------STVKVSFS--DQ----STFYAQV 226 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~---~~g~vlT~~Hvv~~~------~~~~v~~~--~g----~~~~~~v 226 (359)
..|++++|..... . ....|+|.+|+ ++ ||||||||+.+. ..+.+... +. ..+.++-
T Consensus 5 ~~p~~g~l~~~~~-~-------~~~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~ 75 (218)
T 3cp7_A 5 DSPHIGKVFFSTN-Q-------GDFVCSANIVASANQS-TVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEE 75 (218)
T ss_dssp TCTTEEEEEEEET-T-------EEEEEEEEEBCCTTSC-EEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEE
T ss_pred CCceEEEEEEEcC-C-------CCeEEEEEEEecCCCC-EEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEE
Confidence 3567788865321 1 12379999998 77 999999999643 24555542 11 1344433
Q ss_pred EEEc--------CCCCEEEEEEcCC--CC---Ccc-ceEecCCCCCCCCCEEEEEecCCCCC---CceeEeEEeeeeccc
Q 018198 227 VGHD--------QVNDLAVLHIDAP--NH---ELR-PIHVSVSADLRVGKKIYAIGHPLGWS---FTCTTGVISALDREI 289 (359)
Q Consensus 227 ~~~d--------~~~DlAll~v~~~--~~---~~~-~~~l~~~~~~~~G~~v~~iG~p~~~~---~~~~~G~vs~~~~~~ 289 (359)
+..+ ..+||||||++.+ .. .+. +++|... ...|+.+++.|||.... .......-.......
T Consensus 76 ~~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~l~~C~~~~~~~~~ 153 (218)
T 3cp7_A 76 LVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQELHSCHGTATNDPM 153 (218)
T ss_dssp EEECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSSCEEEEEECEECTT
T ss_pred EEECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCceeeEeeeeEEcCCC
Confidence 3332 3579999999986 11 133 5566432 25789999999996432 111111100000000
Q ss_pred CCcccccEEEEcccCCCCCccceeecC---CCeEEEEEeeecCCCcceeEEEEe-hHHHHHHHHHHHh
Q 018198 290 PGRLIQGVIQIDASVNLGNSGGPLLDS---SGSLIGVNTFITSGAFSGIGFALP-IDTVRGIVDQLVK 353 (359)
Q Consensus 290 ~~~~~~~~i~~~~~~~~G~SGgPl~~~---~G~viGi~~~~~~~~~~~~~~aip-~~~i~~~l~~l~~ 353 (359)
......++ |..+.|+|||||+.. .++++||+|++.. ......|+-. -+.++.++++..+
T Consensus 154 -~~~~~~~~---Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~g-c~~~~~~~p~~~~~~~~l~~~a~~ 216 (218)
T 3cp7_A 154 -GSSTQGIP---CNMTGGSSGGPWFLGNGTGGAQNSTNSYGYT-FLPNVMFGPYFGSGAQQNYNYAST 216 (218)
T ss_dssp -SSSCEEEE---CCCCTTCTTCEEEESSSSSSCEEEECCEEET-TEEEEEEECCCCHHHHHHHHHHTT
T ss_pred -CCceEEec---CCCCCCCcCCeeEEccCCCeEEEEEEccccC-CCCCcEEcCcCCHHHHHHHHHHHh
Confidence 00011222 334679999999954 2789999999863 3233444432 3677777776544
No 116
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.40 E-value=4.6e-12 Score=118.10 Aligned_cols=181 Identities=14% Similarity=0.067 Sum_probs=116.0
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC------CcEEEEEEEEEcC---
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD------QSTFYAQVVGHDQ--- 231 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~------g~~~~~~v~~~d~--- 231 (359)
...|.+|.|.... ....++|.+|+++ ||||+|||+.....+.|++.. +..+..+-+..++
T Consensus 103 ~~~Pw~v~l~~~~----------~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~ 171 (317)
T 3h5c_B 103 QDLPWQVKLTNSE----------GKDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYD 171 (317)
T ss_dssp TCCTTEEEEECSS----------SCEEEEEEEEETT-EEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCB
T ss_pred CCCCcEEEEeccC----------CceeeeeEEeeCC-EEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCC
Confidence 3568888886421 1236999999987 999999999777777777742 2345555455554
Q ss_pred ----CCCEEEEEEcCCCC---CccceEecCCC----CCCCCCEEEEEecCCCC---CCceeEeEEeeeecc-----cCCc
Q 018198 232 ----VNDLAVLHIDAPNH---ELRPIHVSVSA----DLRVGKKIYAIGHPLGW---SFTCTTGVISALDRE-----IPGR 292 (359)
Q Consensus 232 ----~~DlAll~v~~~~~---~~~~~~l~~~~----~~~~G~~v~~iG~p~~~---~~~~~~G~vs~~~~~-----~~~~ 292 (359)
.+|||||+++.+.. .+.|+.|.... .+..|+.+++.||.... ...+....+..+... +...
T Consensus 172 ~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~ 251 (317)
T 3h5c_B 172 ADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVT 251 (317)
T ss_dssp TTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCC
T ss_pred CCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCc
Confidence 45999999987543 46677775432 45689999999997521 112222333333211 1111
Q ss_pred ccccEEEEc--ccCCCCCccceeecC-CCe--EEEEEeeecCCCcceeEEEEehHHHHHHHHHHH
Q 018198 293 LIQGVIQID--ASVNLGNSGGPLLDS-SGS--LIGVNTFITSGAFSGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 293 ~~~~~i~~~--~~~~~G~SGgPl~~~-~G~--viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 352 (359)
....+++.. ...+.|+|||||+-. +|+ ++||++++.......-+.+..+...+.|+++.+
T Consensus 252 ~~~~~~Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 252 VTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp CCTTEEEEECSCCCCCCCTTCEEEEEETTEEEEEEEECCCCSSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred CCCceeECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEECCCCCCCcceEEEEhHHhHHHHHHHh
Confidence 223455553 234579999999954 454 999999865222233456778888888888765
No 117
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.40 E-value=4.5e-12 Score=108.61 Aligned_cols=162 Identities=16% Similarity=0.124 Sum_probs=105.7
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCC--EEEecccccCCCCeEEEEecCCcEEE-----EEEEEEcCCCC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDG--HIVTNYHVICGASTVKVSFSDQSTFY-----AQVVGHDQVND 234 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g--~vlT~~Hvv~~~~~~~v~~~~g~~~~-----~~v~~~d~~~D 234 (359)
...+||.|...+ .-.|.|+.+..+| ++|||+||+.+.........+++.++ ......|+..|
T Consensus 14 ~P~svv~l~~~d-----------~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k~g~~ip~~~~~~~~~~~d~~~D 82 (191)
T 1zyo_A 14 EPASLVAIKSGP-----------TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKMLD 82 (191)
T ss_dssp SCSSEEEEEETT-----------EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEETTEEEECCSCEEEEEECCTTTC
T ss_pred CCCeEEEEEeCC-----------eEEEEEEEEEECCCcEEEEChhhCcCCcceeeecCCCCEEEcccceeeEccCCCCCc
Confidence 334588887632 2279999996444 89999999977532222234555544 33334467899
Q ss_pred EEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccCCcccccEEEEcccCCCCCccc
Q 018198 235 LAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGG 311 (359)
Q Consensus 235 lAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGg 311 (359)
+||+++.+... ....+.+. ....++.|.++|+|.........|+.... .. ...+++++.+.+|.||+
T Consensus 83 ~all~vp~~~~s~lg~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~~g~~~~~----~~---~~~~~~~~~T~~G~SGs 152 (191)
T 1zyo_A 83 FAIVRVPTHVWSKLGVKSTPLV---CPSSKDVITCYGGSSSDCLMSGVGSSSTS----EF---TWKLTHTCPTAAGWSGT 152 (191)
T ss_dssp EEEEECCHHHHHHHTCCCCCBC---CCCSCEEEEEEEESSTTSEEEEEEEEEEC----SS---TTEEEECCCCCTTCTTC
T ss_pred EEEEEcCCChhhhcCcceeEee---cCCCCccEEEEeecCCCCEeecccceeec----cC---CcEEEEEcCCCCCCCCC
Confidence 99999986321 23444442 23368999999998754444444422211 11 24688899999999999
Q ss_pred eeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHH
Q 018198 312 PLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGI 347 (359)
Q Consensus 312 Pl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~ 347 (359)
|+||.+ .+|||+...... ...|.++-+..++.+
T Consensus 153 P~~ng~-~IVGvh~G~~~~--~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 153 PLYSSR-GVVGMHVGFEEI--GKLNRGVNMFYVANY 185 (191)
T ss_dssp EEECSS-CEEEEEEEEEET--TTEEEEECHHHHHHH
T ss_pred cEEcCC-eEEEEEeCcccC--CceeeeeehHHHhhh
Confidence 999865 788999987532 346778888887775
No 118
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.39 E-value=1.2e-14 Score=140.17 Aligned_cols=101 Identities=22% Similarity=0.367 Sum_probs=89.9
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeee-eeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMAC-GIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGL 80 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g-~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~ 80 (359)
+|++++|+++|+|++++|+|||++||+|.++| +++++++.+.+ .+.......|..++|+++|+.+|+++++..|+
T Consensus 193 ~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~-~l~~~~~~~g~~~~~~~a~~~l~~l~~l~~r~--- 268 (400)
T 3nmy_A 193 SPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAE-QMAFLQNSIGGVQGPFDSFLALRGLKTLPLRM--- 268 (400)
T ss_dssp HHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHH-HHHHHHHHHCCBCCHHHHHHHHHHHTTHHHHH---
T ss_pred ccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHH-HHHHHHHhcCCCCCHHHHHHHHHhHhHHHHHH---
Confidence 46788999999999999999999999999999 77776666544 34455667899999999999999999999999
Q ss_pred cCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 81 NKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+++ .+++++++++|++++.|.+|.|.
T Consensus 269 --~~~---------~~~a~~l~~~L~~~p~v~~V~~p 294 (400)
T 3nmy_A 269 --RAH---------CENALALAQWLETHPAIEKVIYP 294 (400)
T ss_dssp --HHH---------HHHHHHHHHHHTTCTTEEEEECT
T ss_pred --HHH---------HHHHHHHHHHHHcCCCEeEEECC
Confidence 888 99999999999999999999986
No 119
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.38 E-value=1.2e-11 Score=118.78 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=117.7
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC----CeEEEEecC-----------CcEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA----STVKVSFSD-----------QSTFYAQ 225 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~----~~~~v~~~~-----------g~~~~~~ 225 (359)
.-.|.+|.|......... ......|.|.+|+++ ||||||||+.+. ..+.|++.. ...+..+
T Consensus 140 ~e~PW~v~l~~~~~~~~~---~~~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~ 215 (394)
T 2b9l_A 140 GEFPWMVAVLKANVIPGS---GEEQLVCGGSLIAPS-VVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIR 215 (394)
T ss_dssp TSSTTEEEEEECC---------CCSEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEE
T ss_pred CCCCcEEEEeeccccccc---cccceEeeEEEEeCC-EEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEE
Confidence 346888888653211000 011247999999987 999999999643 457777742 1233444
Q ss_pred EEEEcC-------CCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCCC-------CceeEeEEeeeecc
Q 018198 226 VVGHDQ-------VNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGWS-------FTCTTGVISALDRE 288 (359)
Q Consensus 226 v~~~d~-------~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~~-------~~~~~G~vs~~~~~ 288 (359)
-+..++ .+|||||+++.+.. .+.++.|........++.+++.||..... ..+....+..+...
T Consensus 216 ~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~ 295 (394)
T 2b9l_A 216 QVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRD 295 (394)
T ss_dssp EEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHH
T ss_pred EEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHH
Confidence 444444 35999999987542 46778886544455678999999975321 22333333333221
Q ss_pred cC---------C---cccccEEEEc----ccCCCCCccceeecC----CC--eEEEEEeeecCCCc-ceeEEEEehHHHH
Q 018198 289 IP---------G---RLIQGVIQID----ASVNLGNSGGPLLDS----SG--SLIGVNTFITSGAF-SGIGFALPIDTVR 345 (359)
Q Consensus 289 ~~---------~---~~~~~~i~~~----~~~~~G~SGgPl~~~----~G--~viGi~~~~~~~~~-~~~~~aip~~~i~ 345 (359)
.. + .....+++.. ...|.|||||||+-. +| .++||++++..-+. ..-+...-+...+
T Consensus 296 ~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT~V~~y~ 375 (394)
T 2b9l_A 296 KCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFR 375 (394)
T ss_dssp HHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEEEEGGGGH
T ss_pred HHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEEEEHHHhH
Confidence 11 0 1123556663 357899999999942 23 69999999862211 1235667788888
Q ss_pred HHHHHHHhcC
Q 018198 346 GIVDQLVKFS 355 (359)
Q Consensus 346 ~~l~~l~~~g 355 (359)
.|+++.++.-
T Consensus 376 ~WI~~~i~~~ 385 (394)
T 2b9l_A 376 NWIDQEMQAK 385 (394)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 8888776643
No 120
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.38 E-value=7.5e-12 Score=117.33 Aligned_cols=165 Identities=16% Similarity=0.205 Sum_probs=104.3
Q ss_pred eEEEEEEeCCCEEEecccccCC-------CCeEEEEecCCc--------EEEEEEEEEcC----------CCCEEEEEEc
Q 018198 187 SGAGFLWDQDGHIVTNYHVICG-------ASTVKVSFSDQS--------TFYAQVVGHDQ----------VNDLAVLHID 241 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~-------~~~~~v~~~~g~--------~~~~~v~~~d~----------~~DlAll~v~ 241 (359)
.|.|.+|+++ ||||||||+.. ...+.|.+.... .+..+-+..++ .+|||||+++
T Consensus 112 ~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L~ 190 (329)
T 1md8_A 112 RGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELE 190 (329)
T ss_dssp EEEEEEETTT-EEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEES
T ss_pred CcceEEecCC-EEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEEEEC
Confidence 6999999987 99999999963 234556664321 12233333332 3599999998
Q ss_pred CCCC---CccceEecCCCC-CCCCCEEEEEecCCCCC---CceeEeEEeeeecccC----------CcccccEEEEc---
Q 018198 242 APNH---ELRPIHVSVSAD-LRVGKKIYAIGHPLGWS---FTCTTGVISALDREIP----------GRLIQGVIQID--- 301 (359)
Q Consensus 242 ~~~~---~~~~~~l~~~~~-~~~G~~v~~iG~p~~~~---~~~~~G~vs~~~~~~~----------~~~~~~~i~~~--- 301 (359)
.+.. .+.|+.|..... ...|..+++.||..... ..+....+..+..... ......+++..
T Consensus 191 ~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~ 270 (329)
T 1md8_A 191 NSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPS 270 (329)
T ss_dssp SCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTT
T ss_pred CcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecCC
Confidence 7643 467777764332 35789999999975322 2233333333321111 01123567763
Q ss_pred --ccCCCCCccceeecC---CC--eEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHh
Q 018198 302 --ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 302 --~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 353 (359)
...|.|||||||+-. ++ .++||+|++..-+ ...+...-+...+.|+++.++
T Consensus 271 ~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~-~~~gvyT~V~~y~~WI~~~i~ 328 (329)
T 1md8_A 271 LKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS-RGYGFYTKVLNYVDWIKKEME 328 (329)
T ss_dssp CSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSS-SSCEEEEEGGGTHHHHHHHHH
T ss_pred CCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcC-CCCcEEEEHHHHHHHHHHHHh
Confidence 357899999999842 23 5999999986322 234677888888888887664
No 121
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.38 E-value=6.5e-11 Score=107.85 Aligned_cols=187 Identities=17% Similarity=0.165 Sum_probs=111.9
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVG 228 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~ 228 (359)
...|.+|.|........ ....|.|.||+++ ||||||||+.+. ..+.+.+.. +..+..+-+.
T Consensus 33 ~~~Pw~v~l~~~~~~~~------~~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~ 105 (276)
T 2vnt_A 33 ENQPWFAAIYRRHRGGS------VTYVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLI 105 (276)
T ss_dssp GGSTTEEEEEEECSSSC------EEEEEEEEEEETT-EEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEEE
T ss_pred CCCCcEEEEEEecCCCc------ceeEEEEEEeeCC-EEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEEE
Confidence 34688999876432211 1236999999987 999999999653 335555421 2234444444
Q ss_pred EcC---------CCCEEEEEEcCCC-------CCccceEecCC-CCCCCCCEEEEEecCCCCCC------ceeEeEEeee
Q 018198 229 HDQ---------VNDLAVLHIDAPN-------HELRPIHVSVS-ADLRVGKKIYAIGHPLGWSF------TCTTGVISAL 285 (359)
Q Consensus 229 ~d~---------~~DlAll~v~~~~-------~~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~~------~~~~G~vs~~ 285 (359)
.++ ++|||||+++.+. ..+.++.|... ..+..|+.+.+.||...... ......+..+
T Consensus 106 ~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i~ 185 (276)
T 2vnt_A 106 LHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLI 185 (276)
T ss_dssp ECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEE
T ss_pred EccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeEe
Confidence 443 3599999997532 24566666432 35677899999998754221 1222222222
Q ss_pred ecccC-------CcccccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCCcc-eeEEEEehHHHHHHHH
Q 018198 286 DREIP-------GRLIQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGAFS-GIGFALPIDTVRGIVD 349 (359)
Q Consensus 286 ~~~~~-------~~~~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~~~-~~~~aip~~~i~~~l~ 349 (359)
..... .......++.. ...|.|||||||+-. +| .++||.|++..-+.. .-+.+.-+...+.|++
T Consensus 186 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI~ 265 (276)
T 2vnt_A 186 SHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIR 265 (276)
T ss_dssp CHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHH
T ss_pred cHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHH
Confidence 21111 11112233332 347899999999843 34 499999998632211 2255677888899998
Q ss_pred HHHhc
Q 018198 350 QLVKF 354 (359)
Q Consensus 350 ~l~~~ 354 (359)
+.++.
T Consensus 266 ~~~~~ 270 (276)
T 2vnt_A 266 SHTKE 270 (276)
T ss_dssp HHHSC
T ss_pred HHhhh
Confidence 87764
No 122
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.34 E-value=2.7e-11 Score=116.66 Aligned_cols=179 Identities=16% Similarity=0.181 Sum_probs=115.1
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC----CCeEEEEecC-------CcEEEEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG----ASTVKVSFSD-------QSTFYAQVVGH 229 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~----~~~~~v~~~~-------g~~~~~~v~~~ 229 (359)
...|..|.|.. . ..+.|.+|+++ ||||||||+.+ ...+.|++.. ...+..+-+..
T Consensus 171 ~~~Pw~v~l~~-----~--------~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~ 236 (403)
T 1zjk_A 171 GDFPWQVLILG-----G--------TTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFI 236 (403)
T ss_dssp TSSTTEEEEEE-----S--------CCEEEEEETTT-EEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEE
T ss_pred CCcCCEeEecc-----C--------CceEEEEecCC-EEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEE
Confidence 34678888864 1 25999999987 99999999954 4567777743 12344443444
Q ss_pred cC--------CCCEEEEEEcCCCC---CccceEecCCCC---CCCCCEEEEEecCCCCC----CceeEeEEeeeeccc--
Q 018198 230 DQ--------VNDLAVLHIDAPNH---ELRPIHVSVSAD---LRVGKKIYAIGHPLGWS----FTCTTGVISALDREI-- 289 (359)
Q Consensus 230 d~--------~~DlAll~v~~~~~---~~~~~~l~~~~~---~~~G~~v~~iG~p~~~~----~~~~~G~vs~~~~~~-- 289 (359)
++ .+|||||+++.+.. .+.|+.|..... +..|+.+++.||..... ..+....+..+....
T Consensus 237 Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~ 316 (403)
T 1zjk_A 237 HEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCT 316 (403)
T ss_dssp CTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHH
T ss_pred CCCCCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHh
Confidence 32 46999999987643 467777754332 56799999999975432 223333333332111
Q ss_pred ---CC------cccccEEEEc-----ccCCCCCccceeecC---CC--eEEEEEeeecCCCc--ceeEEEEehHHHHHHH
Q 018198 290 ---PG------RLIQGVIQID-----ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGAF--SGIGFALPIDTVRGIV 348 (359)
Q Consensus 290 ---~~------~~~~~~i~~~-----~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~~--~~~~~aip~~~i~~~l 348 (359)
.. .....+++.. ...|.|||||||+-. +| .++||+|++..+.. ..-+....+...+.|+
T Consensus 317 ~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI 396 (403)
T 1zjk_A 317 AAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWI 396 (403)
T ss_dssp HHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHH
T ss_pred hhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHH
Confidence 00 1223567763 357899999999853 33 59999999832211 2246677888888888
Q ss_pred HHHHh
Q 018198 349 DQLVK 353 (359)
Q Consensus 349 ~~l~~ 353 (359)
++.++
T Consensus 397 ~~~i~ 401 (403)
T 1zjk_A 397 ENIIS 401 (403)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88764
No 123
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.33 E-value=2.7e-11 Score=113.70 Aligned_cols=165 Identities=14% Similarity=0.128 Sum_probs=104.2
Q ss_pred eEEEEEEeCCCEEEecccccCCCCeEEEEecCC-------cEEEE---EEEEEc--------------CCCCEEEEEEcC
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ-------STFYA---QVVGHD--------------QVNDLAVLHIDA 242 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g-------~~~~~---~v~~~d--------------~~~DlAll~v~~ 242 (359)
.|.|.+|+++ ||||||||+.+.....|++... ..... +-+..+ ..+|||||+++.
T Consensus 104 ~CgGsLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~ 182 (333)
T 1elv_A 104 WAGGALINEY-WVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKD 182 (333)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESS
T ss_pred ceeEEEecCC-EEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCC
Confidence 6999999987 9999999997755445555321 11112 222222 246999999987
Q ss_pred CCC---CccceEecCCC---CCCCCCEEEEEecCCCCC----CceeEeEEeeeecccC-----C---------cccccEE
Q 018198 243 PNH---ELRPIHVSVSA---DLRVGKKIYAIGHPLGWS----FTCTTGVISALDREIP-----G---------RLIQGVI 298 (359)
Q Consensus 243 ~~~---~~~~~~l~~~~---~~~~G~~v~~iG~p~~~~----~~~~~G~vs~~~~~~~-----~---------~~~~~~i 298 (359)
+.. .+.|+.|.... .+..|+.+++.||..... ..+....+..+..... . .....++
T Consensus 183 ~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~ 262 (333)
T 1elv_A 183 PVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMI 262 (333)
T ss_dssp CCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEE
T ss_pred CCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeE
Confidence 643 46777775433 245799999999975422 2233333333321110 0 1123566
Q ss_pred EEc----ccCCCCCccceeecC---CC---eEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 299 QID----ASVNLGNSGGPLLDS---SG---SLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 299 ~~~----~~~~~G~SGgPl~~~---~G---~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
+.. ...|.|+|||||+-. ++ .++||+|++..-+ . .+....+...+.|+++.++.
T Consensus 263 Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~-~-~~vyt~V~~y~~WI~~~~~~ 326 (333)
T 1elv_A 263 CAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG-T-YGLYTRVKNYVDWIMKTMQE 326 (333)
T ss_dssp EEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTT-S-EEEEEEGGGGHHHHHHHHHH
T ss_pred CccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCC-C-CcEEeEHHHHHHHHHHHHhc
Confidence 663 357899999999853 23 4999999986322 2 47778888888888887654
No 124
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.32 E-value=1.7e-11 Score=111.23 Aligned_cols=144 Identities=15% Similarity=0.115 Sum_probs=84.5
Q ss_pred hcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCC-----CEEEecccccCCC----CeEEEEecCC-----------
Q 018198 160 EENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQD-----GHIVTNYHVICGA----STVKVSFSDQ----------- 219 (359)
Q Consensus 160 ~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~-----g~vlT~~Hvv~~~----~~~~v~~~~g----------- 219 (359)
+..+++|++|.... ...|+|++|+++ .||||||||+.+. ..+.|.+..+
T Consensus 19 ~~~~~aV~rl~~~g-----------~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~ 87 (268)
T 1arb_A 19 RDIIRAVGAYSKSG-----------TLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPA 87 (268)
T ss_dssp TTGGGGEEEEEETT-----------EEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGG
T ss_pred HHhhceEEEEEeCC-----------ccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccccc
Confidence 45678999986421 237999999972 4999999999752 2455555210
Q ss_pred ----------cE-EEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCC---------------
Q 018198 220 ----------ST-FYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGW--------------- 273 (359)
Q Consensus 220 ----------~~-~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~--------------- 273 (359)
.. ....+.+....+||||||++.+.. .+..+++.||....
T Consensus 88 ~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v~--------------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~ 153 (268)
T 1arb_A 88 SGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAAN--------------PAFNLFWAGWDRRDQNYPGAIAIHHPNVA 153 (268)
T ss_dssp GGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCCC--------------GGGCCEEBCEECCSCCCSCEEEEECGGGC
T ss_pred cccccCCcceEEeccceEecCCCCCceEEEEecCCCC--------------CCCceEEeCcCccCCCCCcceeeccCCcc
Confidence 11 122344556789999999998531 12334555553221
Q ss_pred CCceeEeEEeeeecccCCcccccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeec
Q 018198 274 SFTCTTGVISALDREIPGRLIQGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 274 ~~~~~~G~vs~~~~~~~~~~~~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
...+....+..............+++.. ...|.|+|||||+..+++++||++++.
T Consensus 154 l~~i~~~~~~~~~~~~~~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 154 EKRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp SCEEEEECSCCEEECTTSSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred cEEEEeeccccccccccccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 1111111111000001111113456652 247899999999976889999999985
No 125
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.32 E-value=7.5e-11 Score=113.63 Aligned_cols=186 Identities=12% Similarity=0.126 Sum_probs=113.9
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC--CeEEEEecCC-------------------
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA--STVKVSFSDQ------------------- 219 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~--~~~~v~~~~g------------------- 219 (359)
.-.|.+|.|..... .. ....|.|.+|+++ ||||||||+.+. ..+.|++..-
T Consensus 128 ~e~Pw~v~L~~~~~-g~------~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~ 199 (408)
T 2xxl_A 128 SSRPWMALLRYQQF-GE------SRFLCGGAMISER-YILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAP 199 (408)
T ss_dssp TSSTTEEEEEEECS-SS------EEEEEEEEEEETT-EEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECC
T ss_pred CCCCcEEEEEeecC-Cc------eeEEEEEEEEECC-EEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCC
Confidence 34578888865321 10 1236999999987 999999999754 4677777421
Q ss_pred --cEEEEEEEEEcC-------CCCEEEEEEcCCCC---CccceEecCCCC----CCCCCEEEEEecCCCCC----CceeE
Q 018198 220 --STFYAQVVGHDQ-------VNDLAVLHIDAPNH---ELRPIHVSVSAD----LRVGKKIYAIGHPLGWS----FTCTT 279 (359)
Q Consensus 220 --~~~~~~v~~~d~-------~~DlAll~v~~~~~---~~~~~~l~~~~~----~~~G~~v~~iG~p~~~~----~~~~~ 279 (359)
..+..+-+..++ .+|||||+++.+.. .+.|+.|..... ...|+.+++.||..... ..+..
T Consensus 200 ~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~ 279 (408)
T 2xxl_A 200 PVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQ 279 (408)
T ss_dssp CCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEE
T ss_pred ceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheE
Confidence 122333334443 35999999987643 467777754322 46789999999975322 22333
Q ss_pred eEEeeeecccC-----CcccccEEEEc----ccCCCCCcccee------ecC-CC--eEEEEEeeecCCCc--ceeEEEE
Q 018198 280 GVISALDREIP-----GRLIQGVIQID----ASVNLGNSGGPL------LDS-SG--SLIGVNTFITSGAF--SGIGFAL 339 (359)
Q Consensus 280 G~vs~~~~~~~-----~~~~~~~i~~~----~~~~~G~SGgPl------~~~-~G--~viGi~~~~~~~~~--~~~~~ai 339 (359)
..+..+..... .......++.. ...|.||||||| +.. +| .++||+|++..+.. ..-+...
T Consensus 280 ~~v~iv~~~~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYT 359 (408)
T 2xxl_A 280 ANVPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYT 359 (408)
T ss_dssp EEEEEECHHHHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEE
T ss_pred eeeeecCHHHHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEE
Confidence 33333322111 11112456653 357889999999 532 33 69999999842211 1235667
Q ss_pred ehHHHHHHHHHHHhc
Q 018198 340 PIDTVRGIVDQLVKF 354 (359)
Q Consensus 340 p~~~i~~~l~~l~~~ 354 (359)
-+...+.|+++.++.
T Consensus 360 rVs~y~~WI~~~i~~ 374 (408)
T 2xxl_A 360 NVGEYVQWITDTMAS 374 (408)
T ss_dssp EGGGGHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhh
Confidence 778888888776553
No 126
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.29 E-value=4.9e-11 Score=114.69 Aligned_cols=166 Identities=16% Similarity=0.194 Sum_probs=102.9
Q ss_pred eEEEEEEeCCCEEEecccccCCC-------CeEEEEecCC--------cEEEEEEEEEcC----------CCCEEEEEEc
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGA-------STVKVSFSDQ--------STFYAQVVGHDQ----------VNDLAVLHID 241 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~-------~~~~v~~~~g--------~~~~~~v~~~d~----------~~DlAll~v~ 241 (359)
.|.|.+|+++ ||||||||+... ..+.|.+... ..+..+-+..++ .+|||||+++
T Consensus 180 ~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~ 258 (399)
T 1gpz_A 180 RGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELE 258 (399)
T ss_dssp EEEEEEETTT-EEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEEES
T ss_pred CeEEEEeCCC-EEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEEEC
Confidence 6999999987 999999999643 2356666431 122233333332 3599999998
Q ss_pred CCCC---CccceEecCCCC-CCCCCEEEEEecCCCC---CCceeEeEEeeeecccC----C------cccccEEEEc---
Q 018198 242 APNH---ELRPIHVSVSAD-LRVGKKIYAIGHPLGW---SFTCTTGVISALDREIP----G------RLIQGVIQID--- 301 (359)
Q Consensus 242 ~~~~---~~~~~~l~~~~~-~~~G~~v~~iG~p~~~---~~~~~~G~vs~~~~~~~----~------~~~~~~i~~~--- 301 (359)
.+.. .+.|+.|..... ...|..+++.||.... ...+....+..+..... . .....+++..
T Consensus 259 ~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~ 338 (399)
T 1gpz_A 259 NSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPS 338 (399)
T ss_dssp SCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECGG
T ss_pred CcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccCC
Confidence 7643 467777764332 3578999999997532 12233333333321111 0 1123456653
Q ss_pred --ccCCCCCccceeecC---CC--eEEEEEeeecCCCcceeEEEEehHHHHHHHHHHHhc
Q 018198 302 --ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 302 --~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 354 (359)
...|.|||||||+-. ++ .++||+|++..-+ .+.+....+...+.|+++.++.
T Consensus 339 ~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~-~~~~vyt~V~~y~~WI~~~~~~ 397 (399)
T 1gpz_A 339 LKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS-RGYGFYTKVLNYVDWIKKEMEE 397 (399)
T ss_dssp GGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTT-TTEEEEEEGGGGHHHHHHHTC-
T ss_pred CCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcC-CCCeEEEEhHHhHHHHHHHhcc
Confidence 357899999999842 23 5999999986322 2357778888888988887653
No 127
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.26 E-value=2.1e-11 Score=118.27 Aligned_cols=182 Identities=13% Similarity=0.141 Sum_probs=110.0
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccC--------CCCeEEEEecCC----------cEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVIC--------GASTVKVSFSDQ----------STFY 223 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~--------~~~~~~v~~~~g----------~~~~ 223 (359)
..|..|.|..... ....|.|.||+++ ||||||||+. ....+.|++... ....
T Consensus 176 ~~Pw~v~l~~~~~---------~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~ 245 (424)
T 3nxp_A 176 MSPWQVMLFRKSP---------QELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM 245 (424)
T ss_dssp SCTTEEEEEETTT---------TEEEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEC
T ss_pred CCCCEEEEeecCC---------CCccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEE
Confidence 3467777753210 1236999999987 9999999984 234577777421 1222
Q ss_pred EEEEEEcC--------CCCEEEEEEcCCCC---CccceEecCCCC----CCCCCEEEEEecCCC---------C--CCce
Q 018198 224 AQVVGHDQ--------VNDLAVLHIDAPNH---ELRPIHVSVSAD----LRVGKKIYAIGHPLG---------W--SFTC 277 (359)
Q Consensus 224 ~~v~~~d~--------~~DlAll~v~~~~~---~~~~~~l~~~~~----~~~G~~v~~iG~p~~---------~--~~~~ 277 (359)
.+-+..++ .+|||||+++.+.. .+.++.|..... +..|..+++.||... . ...+
T Consensus 246 V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L 325 (424)
T 3nxp_A 246 LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL 325 (424)
T ss_dssp EEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBC
T ss_pred EEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccc
Confidence 33333333 35999999987542 466777753221 357899999999731 1 2233
Q ss_pred eEeEEeeeeccc-----CCcccccEEEEc--------ccCCCCCccceeecC---CC--eEEEEEeeecCCCc-ceeEEE
Q 018198 278 TTGVISALDREI-----PGRLIQGVIQID--------ASVNLGNSGGPLLDS---SG--SLIGVNTFITSGAF-SGIGFA 338 (359)
Q Consensus 278 ~~G~vs~~~~~~-----~~~~~~~~i~~~--------~~~~~G~SGgPl~~~---~G--~viGi~~~~~~~~~-~~~~~a 338 (359)
....+..+.... .......+++.. ...|.|+|||||+-. +| .++||+|++..-+. ..-+.+
T Consensus 326 ~~~~v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVy 405 (424)
T 3nxp_A 326 QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY 405 (424)
T ss_dssp EEEEEEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEE
T ss_pred eEEEeeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEE
Confidence 344443332211 111223567763 267899999999843 34 69999999863211 123556
Q ss_pred EehHHHHHHHHHHHh
Q 018198 339 LPIDTVRGIVDQLVK 353 (359)
Q Consensus 339 ip~~~i~~~l~~l~~ 353 (359)
.-+...+.|+++.++
T Consensus 406 T~Vs~y~~WI~~~i~ 420 (424)
T 3nxp_A 406 THVFRLKKWIQKVID 420 (424)
T ss_dssp EECTTCHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHH
Confidence 777777777776554
No 128
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.26 E-value=2.4e-13 Score=131.55 Aligned_cols=101 Identities=15% Similarity=0.228 Sum_probs=89.5
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
+|++++|+++|+|++++|+|||++||+|+++|.++++++.+.+ .+......+|+.++|+++|+.+|+++++..|+
T Consensus 207 ~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~-~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~---- 281 (414)
T 3ndn_A 207 TPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDG-PVQKLMRHTGPAMSAFNAWVLLKGLETLAIRV---- 281 (414)
T ss_dssp HHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTT-HHHHHHHHHCCCCCHHHHHHHHHHGGGHHHHH----
T ss_pred ccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHH-HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH----
Confidence 4667899999999999999999999999999999998766542 33345567899999999999999999999999
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+++ .+++++++++|++++.|.+|.|.
T Consensus 282 -~~~---------~~~a~~l~~~L~~~p~v~~v~~p 307 (414)
T 3ndn_A 282 -QHS---------NASAQRIAEFLNGHPSVRWVRYP 307 (414)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred -HHH---------HHHHHHHHHHHhcCCCEeEEECC
Confidence 888 89999999999999999999885
No 129
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.24 E-value=3.2e-10 Score=117.33 Aligned_cols=182 Identities=15% Similarity=0.159 Sum_probs=114.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVGH 229 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~~ 229 (359)
..|.+|.|.... ....++|.||+++ ||||||||+... ..+.|.+.. ...+...-+..
T Consensus 572 ~~PW~VsL~~~~----------~~~~CGGSLIs~~-wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~ 640 (791)
T 4dur_A 572 SWPWQVSLRTRF----------GMHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFL 640 (791)
T ss_dssp SSTTEEEEECTT----------SCEEEEEEEEETT-EEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEE
T ss_pred CCCeEEEEEecC----------CCeEEEEEEEeCC-EEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEEC
Confidence 457788875321 1237999999987 999999999653 346666632 12333333333
Q ss_pred c-CCCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC----CCceeEeEEeeeeccc-------CCcc
Q 018198 230 D-QVNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW----SFTCTTGVISALDREI-------PGRL 293 (359)
Q Consensus 230 d-~~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~----~~~~~~G~vs~~~~~~-------~~~~ 293 (359)
+ ..+|||||+++.+.. .+.++.|.... .+..|..+++.||.... ...+....+..+.... ....
T Consensus 641 hp~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i 720 (791)
T 4dur_A 641 EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRV 720 (791)
T ss_dssp CTTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCC
T ss_pred CCCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCC
Confidence 4 357999999987542 46677775432 45678999999997532 1223333333332111 1122
Q ss_pred cccEEEEc-----ccCCCCCccceeecC-CC--eEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHHhc
Q 018198 294 IQGVIQID-----ASVNLGNSGGPLLDS-SG--SLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 294 ~~~~i~~~-----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~~~ 354 (359)
...+++.. ...+.|+|||||+-. +| .|+||++++..-+. ..-+...-+...+.++++.++.
T Consensus 721 ~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~~ 790 (791)
T 4dur_A 721 QSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRN 790 (791)
T ss_dssp CTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHHH
T ss_pred CCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHHh
Confidence 33556653 356889999999954 23 59999999863221 2236677888889998887763
No 130
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.23 E-value=2.8e-11 Score=119.54 Aligned_cols=187 Identities=16% Similarity=0.119 Sum_probs=112.0
Q ss_pred CCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC-CcEEEEEEEEEcC-------
Q 018198 163 ISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD-QSTFYAQVVGHDQ------- 231 (359)
Q Consensus 163 ~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~-g~~~~~~v~~~d~------- 231 (359)
.|..|.|....... ....|.|.+|+++ ||||+|||+... ..+.|.+.. ...+..+-+..++
T Consensus 226 ~Pw~v~l~~~~~~~-------~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~ 297 (497)
T 1rrk_A 226 QPWQAKISVIRPSK-------GHESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGK 297 (497)
T ss_dssp STTEEEEEECC--C-------CCEEEEEEECSSS-EEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTT
T ss_pred cCcEEEEEEEcCCC-------CCceeEEEEecCC-EEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCcccccc
Confidence 57888886532211 1237999999987 999999999753 467888764 2345544444332
Q ss_pred ---------CCCEEEEEEcCCCC---CccceEecCCC------CCCCCCEEEEEecCCCC------------CCceeEeE
Q 018198 232 ---------VNDLAVLHIDAPNH---ELRPIHVSVSA------DLRVGKKIYAIGHPLGW------------SFTCTTGV 281 (359)
Q Consensus 232 ---------~~DlAll~v~~~~~---~~~~~~l~~~~------~~~~G~~v~~iG~p~~~------------~~~~~~G~ 281 (359)
.+|||||+++.+.. .+.|+.|.... .+..|..+++.||.... ...+....
T Consensus 298 ~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~ 377 (497)
T 1rrk_A 298 KEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 377 (497)
T ss_dssp GGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEE
T ss_pred ccccccccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeee
Confidence 35999999987643 46777875422 24456665555542111 11222222
Q ss_pred Eeeee------cc--------cC------CcccccEEEEcc-------cCCCCCccceeecC-CC--eEEEEEeeecC-C
Q 018198 282 ISALD------RE--------IP------GRLIQGVIQIDA-------SVNLGNSGGPLLDS-SG--SLIGVNTFITS-G 330 (359)
Q Consensus 282 vs~~~------~~--------~~------~~~~~~~i~~~~-------~~~~G~SGgPl~~~-~G--~viGi~~~~~~-~ 330 (359)
+.-+. +. +. ......++|... ..|.|+|||||+-. +| .++||+|++.. +
T Consensus 378 v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~ 457 (497)
T 1rrk_A 378 VYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDV 457 (497)
T ss_dssp EEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCC
T ss_pred EEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCC
Confidence 22221 10 00 012235677642 47899999999943 34 49999999862 2
Q ss_pred Cc--------cee--EEEEehHHHHHHHHHHHhcCcc
Q 018198 331 AF--------SGI--GFALPIDTVRGIVDQLVKFSRY 357 (359)
Q Consensus 331 ~~--------~~~--~~aip~~~i~~~l~~l~~~g~v 357 (359)
+. .+. ++..-+...+.|+++.++...+
T Consensus 458 C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~~~~~ 494 (497)
T 1rrk_A 458 CKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDEDL 494 (497)
T ss_dssp C--------CCTTCEEEEEEGGGGHHHHHHHTTTSSC
T ss_pred CCCccccCCCCCccceeeeeHHHHHHHHHHHhCcccc
Confidence 21 111 2566788899999988776543
No 131
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.22 E-value=1e-12 Score=128.20 Aligned_cols=101 Identities=25% Similarity=0.297 Sum_probs=87.5
Q ss_pred CCCccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecc
Q 018198 1 MSPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGL 80 (359)
Q Consensus 1 ~~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~ 80 (359)
++|+.++|+++|+|++++|+|||++||+|+++|.++++++.+. .+.......|+.++|+++|+..||++++..|+
T Consensus 240 ~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~--~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~--- 314 (445)
T 1qgn_A 240 ATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVS--EIRNLHHILGGALNPNAAYLIIRGMKTLHLRV--- 314 (445)
T ss_dssp TCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHH--HHHHHHHHHCCCCCHHHHHHHHHHGGGHHHHH---
T ss_pred cccccCCccccCCEEEEECCcccccccccceEEEEEECHHHHH--HHHHHHHHhCCCCCHHHHHHHHHhHHHHHHHH---
Confidence 3577889999999999999999999999999999998765432 23344456789999999999999999999999
Q ss_pred cCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 81 NKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+.+ .+++++++++|++++.|.+|.+.
T Consensus 315 --~~~---------~~~a~~l~~~L~~~p~v~~v~~p 340 (445)
T 1qgn_A 315 --QQQ---------NSTALRMAEILEAHPKVRHVYYP 340 (445)
T ss_dssp --HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred --HHH---------HHHHHHHHHHHhcCCCceEEECC
Confidence 888 88999999999999999888874
No 132
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.19 E-value=2.4e-12 Score=124.54 Aligned_cols=100 Identities=17% Similarity=0.232 Sum_probs=87.0
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
+|+.++|+++|+|++++|+|||++||+|.++|.++++++.+ + .+.......|+.++|+++|+.+|+++++..|+
T Consensus 210 ~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~-~-~l~~~~~~~G~~~~~~~a~~~~~~l~~l~~r~---- 283 (415)
T 2fq6_A 210 AGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCW-E-QLRENAYLMGQMVDADTAYITSRGLRTLGVRL---- 283 (415)
T ss_dssp TTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTH-H-HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH----
T ss_pred ccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHH-H-HHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHH----
Confidence 57788999999999999999999999999999999877543 2 33334455799999999999999999999999
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+++ .+++.+++++|++++.+.++.+.
T Consensus 284 -~~~---------~~n~~~l~~~L~~~~~v~~v~~p 309 (415)
T 2fq6_A 284 -RQH---------HESSLKVAEWLAEHPQVARVNHP 309 (415)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred -HHH---------HHHHHHHHHHHHcCCCeeEEECC
Confidence 888 89999999999999988888764
No 133
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.19 E-value=5.6e-11 Score=123.07 Aligned_cols=185 Identities=15% Similarity=0.135 Sum_probs=110.0
Q ss_pred CCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCC---CCeEEEEecC-CcEEEEEEEEEcC-------
Q 018198 163 ISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICG---ASTVKVSFSD-QSTFYAQVVGHDQ------- 231 (359)
Q Consensus 163 ~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~---~~~~~v~~~~-g~~~~~~v~~~d~------- 231 (359)
.|..|.|....... ....|+|.+|+++ ||||+|||+.. ...+.|.+.. ...+..+-+..++
T Consensus 468 ~Pw~~~v~~~~~~~-------~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~ 539 (741)
T 3hrz_D 468 QPWQAKISVIRPSK-------GHESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGK 539 (741)
T ss_dssp CTTEEEEEECCCC------------EEEEECSSS-EEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTT
T ss_pred cCCeEEEEEEeCCC-------CCCEEEEEEecCC-EEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccc
Confidence 56666665532111 1246999999987 99999999964 3467787763 3445555444443
Q ss_pred ---------CCCEEEEEEcCCCC---CccceEecCC------CCCCCCCEEEEEecCCCCCC------------ceeEeE
Q 018198 232 ---------VNDLAVLHIDAPNH---ELRPIHVSVS------ADLRVGKKIYAIGHPLGWSF------------TCTTGV 281 (359)
Q Consensus 232 ---------~~DlAll~v~~~~~---~~~~~~l~~~------~~~~~G~~v~~iG~p~~~~~------------~~~~G~ 281 (359)
.+|||||+++.+.. .+.++.|... ..+..|..+.+.||...... .+....
T Consensus 540 ~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~ 619 (741)
T 3hrz_D 540 KEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 619 (741)
T ss_dssp GGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEE
T ss_pred cccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccce
Confidence 35999999987542 4667777522 12456777777776432211 122222
Q ss_pred Eeeee---c-----------cc------CCcccccEEEEc-------ccCCCCCccceeecC-CC--eEEEEEeeec-CC
Q 018198 282 ISALD---R-----------EI------PGRLIQGVIQID-------ASVNLGNSGGPLLDS-SG--SLIGVNTFIT-SG 330 (359)
Q Consensus 282 vs~~~---~-----------~~------~~~~~~~~i~~~-------~~~~~G~SGgPl~~~-~G--~viGi~~~~~-~~ 330 (359)
+.... + .+ .......+++.. ...|.|||||||+-. +| .++||+|++. .+
T Consensus 620 v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~ 699 (741)
T 3hrz_D 620 VYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDV 699 (741)
T ss_dssp EEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCC
T ss_pred eEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcc
Confidence 22221 0 00 011223567763 347889999999954 33 3999999986 12
Q ss_pred Ccc-----ee-----EEEEehHHHHHHHHHHHhcC
Q 018198 331 AFS-----GI-----GFALPIDTVRGIVDQLVKFS 355 (359)
Q Consensus 331 ~~~-----~~-----~~aip~~~i~~~l~~l~~~g 355 (359)
... .- ++...+...+.|+++.++..
T Consensus 700 C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 700 CKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE 734 (741)
T ss_dssp CC------CCCTTCEEEEEEGGGSHHHHHHHTTTS
T ss_pred cCCcccccCCCCCccceEEEhHHhHHHHHHHhcCC
Confidence 211 11 67788999999999988763
No 134
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.16 E-value=1.4e-10 Score=117.74 Aligned_cols=183 Identities=18% Similarity=0.182 Sum_probs=106.0
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC---------CcEEEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD---------QSTFYAQVVG 228 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~---------g~~~~~~v~~ 228 (359)
...|.+|.|...... ....+.|.||+++ ||||+|||+.+. ..+.|.+.. +..+..+-+.
T Consensus 397 ~~~Pw~v~L~~~~~~--------~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii 467 (625)
T 2f83_A 397 GEWPWQVTLHTTSPT--------QRHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEII 467 (625)
T ss_dssp TSSTTEEEEEECSSS--------SEEEEEEEECSSS-EEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEE
T ss_pred CCCCeEEEEEEecCC--------CcEEEEEEEECCC-EEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEE
Confidence 346788888653211 1247999999987 999999999653 346676632 2234444445
Q ss_pred EcC-------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCCCC-----CCceeEeEEeeeecc----
Q 018198 229 HDQ-------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPLGW-----SFTCTTGVISALDRE---- 288 (359)
Q Consensus 229 ~d~-------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~~~-----~~~~~~G~vs~~~~~---- 288 (359)
.++ .+|||||+++.+.. .+.|+.|.... ....++.+++.||.... ...+....+..+...
T Consensus 468 ~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~ 547 (625)
T 2f83_A 468 IHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQK 547 (625)
T ss_dssp ECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHT
T ss_pred ECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHH
Confidence 554 35999999987643 45677775432 34568899999997432 112222333222211
Q ss_pred -cCC-cccccEEEE-----cccCCCCCccceeecC-CC--eEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHH
Q 018198 289 -IPG-RLIQGVIQI-----DASVNLGNSGGPLLDS-SG--SLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 289 -~~~-~~~~~~i~~-----~~~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~ 352 (359)
... .....+++. ....+.|||||||+-. +| .++||++++..-.. ..-+...-+...+.|+++.+
T Consensus 548 ~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~~~ 622 (625)
T 2f83_A 548 RYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 622 (625)
T ss_dssp TCTTSCCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHHTC
T ss_pred HhccCCCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 101 011123332 2357889999999953 45 69999999862111 12245667777888887654
No 135
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.13 E-value=5.1e-12 Score=121.23 Aligned_cols=101 Identities=25% Similarity=0.412 Sum_probs=89.4
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
+|+.++|+++|+|++++|+|||++||+|.++|.++++++.+.+ .+.......|..++|+++|+..++++++..|+
T Consensus 192 ~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~-~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~---- 266 (392)
T 3qhx_A 192 SPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQ-SFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRM---- 266 (392)
T ss_dssp CTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHH----
T ss_pred ccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHH-HHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHH----
Confidence 5788999999999999999999999999999999988655543 34445556799999999999999999999999
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+++ .+++++++++|++++.|.+|.+.
T Consensus 267 -~~~---------~~~~~~l~~~L~~~~~v~~v~~p 292 (392)
T 3qhx_A 267 -QRH---------SENAAAVAEFLAEHPAISTVLYP 292 (392)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred -HHH---------HHHHHHHHHHHhcCCCcceEECC
Confidence 888 89999999999999999999885
No 136
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.13 E-value=4.5e-10 Score=112.66 Aligned_cols=167 Identities=15% Similarity=0.137 Sum_probs=89.2
Q ss_pred eEEEEEEeCCCEEEecccccCCC--CeEEEEecC----------CcEEEEEEEEEcC-------CCCEEEEEEcCCCC--
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGA--STVKVSFSD----------QSTFYAQVVGHDQ-------VNDLAVLHIDAPNH-- 245 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~--~~~~v~~~~----------g~~~~~~v~~~d~-------~~DlAll~v~~~~~-- 245 (359)
.+.|.||+++ ||||||||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+..
T Consensus 346 ~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~ 424 (565)
T 2xrc_A 346 TCGGIYIGGC-WILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKK 424 (565)
T ss_dssp CCCCEEEETT-EEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSSS
T ss_pred eeeEEEEeCC-EEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeeccccccc
Confidence 6999999987 999999999753 345555531 1223344344443 45999999987532
Q ss_pred -----CccceEecCC-CCCCCCCEEEEEecCCCCC----CceeEeEEeeeec--c-cCCcccc-cEEEEc-----ccCCC
Q 018198 246 -----ELRPIHVSVS-ADLRVGKKIYAIGHPLGWS----FTCTTGVISALDR--E-IPGRLIQ-GVIQID-----ASVNL 306 (359)
Q Consensus 246 -----~~~~~~l~~~-~~~~~G~~v~~iG~p~~~~----~~~~~G~vs~~~~--~-~~~~~~~-~~i~~~-----~~~~~ 306 (359)
...|+.|... ..+..|+.+++.||..... ..+....+..+.. . +...... .+++.. ...+.
T Consensus 425 ~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C~~~~~~~~~~~~~iCAg~~~g~~d~C~ 504 (565)
T 2xrc_A 425 DCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSKFYGNRFYEKEMECAGTYDGSIDACK 504 (565)
T ss_dssp CSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCTHHHHTTSCCTTTEEEEEEC--------
T ss_pred cccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHhHHhhccCcCCCceEEeCCCCCCCccCC
Confidence 2456666533 3356799999999975322 1222233322211 0 1111111 255543 35788
Q ss_pred CCccceeecC--CC--eEEEEEeeecCCCc-ceeEEEEehHHHHHHHHHHHhc
Q 018198 307 GNSGGPLLDS--SG--SLIGVNTFITSGAF-SGIGFALPIDTVRGIVDQLVKF 354 (359)
Q Consensus 307 G~SGgPl~~~--~G--~viGi~~~~~~~~~-~~~~~aip~~~i~~~l~~l~~~ 354 (359)
|+|||||+-. +| .++||+|++..-+. ..-+...-+...+.|+++.+..
T Consensus 505 GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i~~ 557 (565)
T 2xrc_A 505 GDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHVGR 557 (565)
T ss_dssp --CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC--
T ss_pred CccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHhcc
Confidence 9999999943 44 48999999862111 1235567788888888887654
No 137
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.09 E-value=8.6e-12 Score=120.16 Aligned_cols=101 Identities=28% Similarity=0.331 Sum_probs=86.5
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
.+++++|+++|+|++++|+|||++||+++++|.++++++.+.+ .+.......|+.++|+++|+..|+++++..|+
T Consensus 193 ~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~-~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~r~---- 267 (403)
T 3cog_A 193 SPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHN-RLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRM---- 267 (403)
T ss_dssp CTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHH----
T ss_pred ccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHH-HHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHH----
Confidence 4667799999999999999999999999999999886555433 33344455688899999999999999999999
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+.+ .+++++++++|++++.|.++.+.
T Consensus 268 -~~~---------~~n~~~l~~~l~~~~~v~~~~~~ 293 (403)
T 3cog_A 268 -EKH---------FKNGMAVAQFLESNPWVEKVIYP 293 (403)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred -HHH---------HHHHHHHHHHHhcCCCEEEEECC
Confidence 888 88999999999999999888774
No 138
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.04 E-value=2.4e-10 Score=113.30 Aligned_cols=179 Identities=16% Similarity=0.153 Sum_probs=103.1
Q ss_pred CCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC---CeEEEEecC-----CcEEEEEEEEEcC---
Q 018198 163 ISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA---STVKVSFSD-----QSTFYAQVVGHDQ--- 231 (359)
Q Consensus 163 ~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~---~~~~v~~~~-----g~~~~~~v~~~d~--- 231 (359)
.|..|.|... ....|.|.+|+++ ||||+|||+.+. ..+.|++.. +..+..+-+..++
T Consensus 235 ~Pw~v~l~~~-----------~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~ 302 (509)
T 2odp_A 235 TPWHVTIKPK-----------SQETCRGALISDQ-WVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFD 302 (509)
T ss_dssp CTTEEEEEC---------------CEEEEECSSS-EEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCC
T ss_pred CCcEEEEEeC-----------CCcEEEEEEEcCC-EEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCc
Confidence 4677777531 1236999999987 999999999753 356677643 2334444344332
Q ss_pred -------------CCCEEEEEEcCCCC---CccceEecCCC------CCCCCCEEEEEecCCCCCCc------------e
Q 018198 232 -------------VNDLAVLHIDAPNH---ELRPIHVSVSA------DLRVGKKIYAIGHPLGWSFT------------C 277 (359)
Q Consensus 232 -------------~~DlAll~v~~~~~---~~~~~~l~~~~------~~~~G~~v~~iG~p~~~~~~------------~ 277 (359)
.+|||||+++.+.. .+.|+.|.... ....|..+++.||....... +
T Consensus 303 ~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~ 382 (509)
T 2odp_A 303 VFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKL 382 (509)
T ss_dssp TTTTGGGTCCCCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEE
T ss_pred cccccccccccccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCcee
Confidence 36999999987643 46777775322 23457766666654221111 1
Q ss_pred eEeEEeeee---cc---------cC------CcccccEEEEc----ccCCCCCccceeecC-CC--eEEEEEeeecC-CC
Q 018198 278 TTGVISALD---RE---------IP------GRLIQGVIQID----ASVNLGNSGGPLLDS-SG--SLIGVNTFITS-GA 331 (359)
Q Consensus 278 ~~G~vs~~~---~~---------~~------~~~~~~~i~~~----~~~~~G~SGgPl~~~-~G--~viGi~~~~~~-~~ 331 (359)
....+..+. +. +. ......++|.. ...|.|+|||||+-. +| .++||+||+.. ++
T Consensus 383 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C 462 (509)
T 2odp_A 383 NINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPC 462 (509)
T ss_dssp EEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTT
T ss_pred eEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCC
Confidence 111111000 00 00 01223567764 257899999999953 23 49999999862 22
Q ss_pred c-------------cee----EEEEehHHHHHHHHHHHh
Q 018198 332 F-------------SGI----GFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 332 ~-------------~~~----~~aip~~~i~~~l~~l~~ 353 (359)
. .+. .+...+...+.|+++.++
T Consensus 463 ~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 463 LGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLG 501 (509)
T ss_dssp C-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHT
T ss_pred CCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhC
Confidence 1 111 467778888889888765
No 139
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=98.98 E-value=6.2e-11 Score=114.86 Aligned_cols=106 Identities=11% Similarity=-0.017 Sum_probs=86.0
Q ss_pred CCc-cccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEE--eecCCCCccch-hh-hhhhhccceeeeeE
Q 018198 2 SPV-VLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISV--FVGDESGILSR-ID-GVFTRRNCNIESLG 76 (359)
Q Consensus 2 ~p~-~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~--~~~~~G~~lsp-~~-a~l~~RG~~tl~lr 76 (359)
.++ .++|+++|+|++++|+||+++||+|..+|.++++.+.+.+ +.. ....+|..++| ++ +|+.+||++++..|
T Consensus 223 ~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~--l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r 300 (427)
T 3i16_A 223 EFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEK--TSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHI 300 (427)
T ss_dssp TTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHH--HHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHH
T ss_pred cccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHH--HHHhcccCccCccCCccHHHHHHHHHHHHHHHHH
Confidence 344 5789999999999999999999999999999988654432 222 45677888888 77 99999999999999
Q ss_pred eecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeeccCCCCCCCc
Q 018198 77 VIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQSSSSSLEP 126 (359)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~~~~~~~el 126 (359)
+ +++ .+++..++++|+++.. +| +...+++..++
T Consensus 301 ~-----~~~---------~~~a~~la~~L~~~g~--~V-~p~~~~~~~~~ 333 (427)
T 3i16_A 301 S-----MEA---------LKGAILCSRIMELAGF--EV-MPKYDEKRSDI 333 (427)
T ss_dssp H-----HHH---------HHHHHHHHHHHHHTTC--EE-ESCTTSCCSSS
T ss_pred H-----HHH---------HHHHHHHHHHHHhCCC--ee-cCCCCCCCccE
Confidence 9 888 9999999999999986 66 44344445554
No 140
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.96 E-value=6.2e-11 Score=113.44 Aligned_cols=101 Identities=27% Similarity=0.416 Sum_probs=85.3
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
.++.++|+++|+|++++|+|||++||++.++|.++++++.+.+ .+.......|+.++|+++|+.+++++++..|+
T Consensus 185 ~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~-~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~r~---- 259 (389)
T 3acz_A 185 SPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIA-TIKFYRKDAGSLMAPMDAFLCARGMKTLPIRM---- 259 (389)
T ss_dssp CTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHH----
T ss_pred cccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHH-HHHHHHHhcCCCCCHHHHHHHHcCccHHHHHH----
Confidence 4666789999999999999999999999998999888723332 23334444788999999999999999999999
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+.+ .+++++++++|++++.+.++.+.
T Consensus 260 -~~~---------~~~~~~l~~~l~~~~~v~~~~~~ 285 (389)
T 3acz_A 260 -QIH---------MENGLKVAKFLEQHEKIVKVNHP 285 (389)
T ss_dssp -HHH---------HHHHHHHHHHHHHCTTEEEEECT
T ss_pred -HHH---------HHHHHHHHHHHHcCCCeeEEECC
Confidence 888 88999999999999999888774
No 141
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.89 E-value=8.9e-08 Score=83.48 Aligned_cols=163 Identities=12% Similarity=0.174 Sum_probs=107.1
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC-CeEEEEecCCcEEEEE----EEEEcCCCCEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA-STVKVSFSDQSTFYAQ----VVGHDQVNDLA 236 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~-~~~~v~~~~g~~~~~~----v~~~d~~~DlA 236 (359)
+...|+.+....... ...--|+..+ .||+|++|.++.. ..+.|+...|.-.-.. -+..-+..||.
T Consensus 14 ia~~iC~l~n~sdg~--------~~~l~gigyG--~~iItn~HLf~rnng~L~I~s~hG~f~v~nt~~lki~~i~g~Dii 83 (241)
T 3mmg_A 14 ISACVCLLENSSDGH--------SERLFGIGFG--PYIIANQHLFRRNNGELTIKTMHGEFAVANSTQLQMKPVEGRDII 83 (241)
T ss_dssp HHTTEEEEEEEETTE--------EEEEEEEEET--TEEEECGGGGSSTTCEEEEEETTEEEEEEEGGGSCEEECTBSSCE
T ss_pred hhheEEEEEEEeCCC--------EEEEEEEeEC--CEEEEChhhcccCCCeEEEEECCceEEccCCCceeeEEeCCccEE
Confidence 456778887653211 1234455555 4999999999765 4688888776332111 25556889999
Q ss_pred EEEEcCCCCCccceEec-CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccCCcccccEEEEcccCCCCCccceeec
Q 018198 237 VLHIDAPNHELRPIHVS-VSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLD 315 (359)
Q Consensus 237 ll~v~~~~~~~~~~~l~-~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~ 315 (359)
++|+.. + +||.+-. .-..+..||+|+++|..+...... -.||....... .....+..+...+..|+.|+||++
T Consensus 84 iIrmPk-D--fpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~~--s~vSesS~i~p-~~~~~fWkHwIsT~~G~CGlPlVs 157 (241)
T 3mmg_A 84 VIKMAK-D--FPPFPQKLKFRQPTIKDRVCMVSTNFQQKSVS--SLVSESSHIVH-KEDTSFWQHWITTKDGQAGSPLVS 157 (241)
T ss_dssp EEECCT-T--SCCCCSCCCBCCCCTTCCEEEEEEEECSSCEE--EEEEEEECCEE-CTTSSEEEECBCCCTTCTTCEEEE
T ss_pred EEeCCC-C--CCCcchhcccCCCCCCCeEEEEEeecccCCcc--EEECCcceeEE-cCCCCEEEEEcCCCCCcCCCeEEE
Confidence 999965 2 5555432 235778999999999754433222 22343322211 111367888889999999999998
Q ss_pred C-CCeEEEEEeeecCCCcceeEEEEehH
Q 018198 316 S-SGSLIGVNTFITSGAFSGIGFALPID 342 (359)
Q Consensus 316 ~-~G~viGi~~~~~~~~~~~~~~aip~~ 342 (359)
. ||.+|||++..... ...||+.|+.
T Consensus 158 ~~Dg~IVGiHsl~~~~--~~~N~F~~f~ 183 (241)
T 3mmg_A 158 IIDGNILGIHSLTHTT--NGSNYFVEFP 183 (241)
T ss_dssp TTTCCEEEEEEEEETT--TCCEEEEECC
T ss_pred cCCCcEEEEEecccCC--CCcEEEEcCC
Confidence 7 99999999998744 3457777754
No 142
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.82 E-value=3.7e-08 Score=79.33 Aligned_cols=98 Identities=15% Similarity=0.157 Sum_probs=66.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecC---------CcEEEEEEEEEcC-
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSD---------QSTFYAQVVGHDQ- 231 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~---------g~~~~~~v~~~d~- 231 (359)
..|..|.|... . ....|+|.+|+++ ||||+|||+.+ ....|.+.. +..+..+-+..++
T Consensus 11 ~~Pw~v~l~~~---~-------~~~~CgGsLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~ 78 (131)
T 1yph_C 11 SWPWQVSLQDK---T-------GFHFCGGSLINEN-WVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSK 78 (131)
T ss_dssp SSTTEEEEECT---T-------SCEEEEEEEEETT-EEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTT
T ss_pred CcCcEEEEEeC---C-------CCEEEEEEEeeCC-EEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCC
Confidence 35777877642 1 1236999999987 99999999976 344555521 2234444444443
Q ss_pred ------CCCEEEEEEcCCCC---CccceEecCCC-CCCCCCEEEEEecCC
Q 018198 232 ------VNDLAVLHIDAPNH---ELRPIHVSVSA-DLRVGKKIYAIGHPL 271 (359)
Q Consensus 232 ------~~DlAll~v~~~~~---~~~~~~l~~~~-~~~~G~~v~~iG~p~ 271 (359)
.+|||||+++.+.. .+.|+.|.... .+..|+.+++.||..
T Consensus 79 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 79 YNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp CCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCc
Confidence 46999999987643 46778886443 356899999999964
No 143
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=98.81 E-value=6e-10 Score=107.95 Aligned_cols=106 Identities=15% Similarity=-0.004 Sum_probs=81.8
Q ss_pred CCc-cccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEE--eecCCCCccch-hh-hhhhhccceeeeeE
Q 018198 2 SPV-VLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISV--FVGDESGILSR-ID-GVFTRRNCNIESLG 76 (359)
Q Consensus 2 ~p~-~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~--~~~~~G~~lsp-~~-a~l~~RG~~tl~lr 76 (359)
+++ .++|+++|+|++++|+||+++||++.+||.++++.+...+ +.. .....|..+++ ++ +|+..||++++..|
T Consensus 223 ~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~--l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r 300 (427)
T 3hvy_A 223 EFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQ--ATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHV 300 (427)
T ss_dssp TTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHH--HHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHH--HHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHH
Confidence 344 5799999999999999999999999999999987654422 222 23445655555 44 99999999999999
Q ss_pred eecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeeccCCCCCCCc
Q 018198 77 VIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQSSSSSLEP 126 (359)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~~~~~~~el 126 (359)
+ +++ .+++..++++|+++.. +| +...+.+..++
T Consensus 301 ~-----~~~---------~~~a~~la~~L~~~g~--~V-~p~~~~~~~~l 333 (427)
T 3hvy_A 301 T-----IEA---------VKGAVFCARIMELAGF--DV-LPKYNDKRTDI 333 (427)
T ss_dssp H-----HHH---------HHHHHHHHHHHHHTTC--EE-ESCTTSCCSSS
T ss_pred H-----HHH---------HHHHHHHHHHHHhCCC--ee-cCCCCCCCceE
Confidence 9 888 9999999999999875 56 43344444444
No 144
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.78 E-value=8.4e-08 Score=79.34 Aligned_cols=121 Identities=14% Similarity=0.227 Sum_probs=79.1
Q ss_pred CCCCEEEEEEcCCCC---CccceEecCCCCCCCCCEEEEEecCCCC--------CCceeEeEEeeeecccC-----Cccc
Q 018198 231 QVNDLAVLHIDAPNH---ELRPIHVSVSADLRVGKKIYAIGHPLGW--------SFTCTTGVISALDREIP-----GRLI 294 (359)
Q Consensus 231 ~~~DlAll~v~~~~~---~~~~~~l~~~~~~~~G~~v~~iG~p~~~--------~~~~~~G~vs~~~~~~~-----~~~~ 294 (359)
..+||||||++.+.. .+.++.|... ....|+.+++.||.... ...+....+..+....+ ....
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~-~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 84 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQ-EPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVT 84 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSS-CCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCC
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCC-CCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCC
Confidence 468999999987643 4678888643 34679999999997532 12233333433322111 1122
Q ss_pred ccEEEEc-----ccCCCCCccceeecCCCeEEEEEeeecCCC--cceeEEEEehHHHHHHHHHHHh
Q 018198 295 QGVIQID-----ASVNLGNSGGPLLDSSGSLIGVNTFITSGA--FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 295 ~~~i~~~-----~~~~~G~SGgPl~~~~G~viGi~~~~~~~~--~~~~~~aip~~~i~~~l~~l~~ 353 (359)
..+++.. ...|.|+|||||+- +|+++||++++..+. ...-+....+...+.|+++.++
T Consensus 85 ~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 85 ESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp TTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 3567764 25789999999994 689999999983221 1224667778888888887664
No 145
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.67 E-value=1.4e-06 Score=75.54 Aligned_cols=174 Identities=12% Similarity=0.093 Sum_probs=109.5
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCC-CeEEEEecCCcEEEE----EEEEEcCCCCE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGA-STVKVSFSDQSTFYA----QVVGHDQVNDL 235 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~-~~~~v~~~~g~~~~~----~v~~~d~~~Dl 235 (359)
-+...|+.|....... ...--|+... + ||+|++|.++.. ..+.|+...|.-.-. --+..-+..||
T Consensus 21 ~Ia~~ic~l~n~sdg~--------~~~l~gigyG-~-~iItn~HLf~~nnG~L~I~s~hG~f~v~nt~~lki~~i~g~Di 90 (229)
T 1lvm_A 21 PISSTICHLTNESDGH--------TTSLYGIGFG-P-FIITNKHLFRRNNGTLLVQSLHGVFKVKNTTTLQQHLIDGRDM 90 (229)
T ss_dssp HHHTTEEEEEEEETTE--------EEEEEEEEET-T-EEEECGGGGGCCSSEEEEEETTEEEEESCGGGSEEEECTTSSC
T ss_pred hhheEEEEEEeccCCc--------eEEEEEEeEC-C-EEEeChhhhccCCCcEEEEeCCCeEEeCCCCceeeEEeCCccE
Confidence 3456778887653211 1133455555 3 999999999765 678888766522110 02445578999
Q ss_pred EEEEEcCCCCCccceEec-CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeecccCCcccccEEEEcccCCCCCccceee
Q 018198 236 AVLHIDAPNHELRPIHVS-VSADLRVGKKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLL 314 (359)
Q Consensus 236 All~v~~~~~~~~~~~l~-~~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~ 314 (359)
.++|+... +||.+-. .-..+..+|+|+++|.-+...... -.||....... .....+...-..+..|+-|.||+
T Consensus 91 iiIrmPkD---fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~~--s~vSesS~i~p-~~~~~fWkHwIsT~~G~CGlPlV 164 (229)
T 1lvm_A 91 IIIRMPKD---FPPFPQKLKFREPQREERICLVTTNFQTKSMS--SMVSDTSCTFP-SSDGIFWKHWIQTKDGQCGSPLV 164 (229)
T ss_dssp EEEECCTT---SCCCCSCCCBCCCCTTCEEEEEEEECSSSSCE--EEECCCEECEE-ETTTTEEEECBCCCTTCTTCEEE
T ss_pred EEEeCCCc---CCCcccccccCCCCCCCeEEEEEeEeecCCcc--EEECCcceeEe-cCCCCEeEEEeeCCCCcCCCcEE
Confidence 99999873 4554421 235778999999999755432221 12333221111 01125666777888999999999
Q ss_pred cC-CCeEEEEEeeecCCCcceeEEEEehHH-HHHHHHHHH
Q 018198 315 DS-SGSLIGVNTFITSGAFSGIGFALPIDT-VRGIVDQLV 352 (359)
Q Consensus 315 ~~-~G~viGi~~~~~~~~~~~~~~aip~~~-i~~~l~~l~ 352 (359)
+. ||++|||++..... ...+|+.|+.. +.++|+...
T Consensus 165 s~~Dg~IVGiHsl~~~~--~~~NyF~~f~~~f~~~L~~~~ 202 (229)
T 1lvm_A 165 STRDGFIVGIHSASNFT--NTNNYFTSVPKNFMELLTNQE 202 (229)
T ss_dssp ETTTCCEEEEEEEEETT--SCSEEEEECCTTHHHHHHCGG
T ss_pred ECCCCcEEEEEcccccC--CCeEEEeCCCHHHHHHHhccc
Confidence 87 99999999998643 34577777653 336666543
No 146
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=98.65 E-value=3.1e-09 Score=104.14 Aligned_cols=100 Identities=37% Similarity=0.508 Sum_probs=83.7
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
.+..+.|+++|+|++++|+|||++||+++++|.++++++.+.+ .+.......|+.++++++|...++++++..|+
T Consensus 258 ~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~-~l~~~~~~~g~~~~~~~~~a~~~al~~~~~r~---- 332 (464)
T 1ibj_A 258 SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAK-EVYFLQNSEGSGLAPFDCWLCLRGIKTMALRI---- 332 (464)
T ss_dssp CTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHH-HHHHHHHHTTCBCCHHHHHHHHHHHTTHHHHH----
T ss_pred ccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHH-HHHHHHHhcCCCCCHHHHHHHHhchhhHHHHH----
Confidence 3556789999999999999999999999999999988644433 23334455788999999999999999999999
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeee
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVST 116 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~ 116 (359)
+.. .+++.+++++|+++..+.++.+
T Consensus 333 -~~~---------~~~~~~l~~~l~~~~~v~~~~~ 357 (464)
T 1ibj_A 333 -EKQ---------QENARKIAMYLSSHPRVKKVYY 357 (464)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTCCEEEC
T ss_pred -HHH---------HHHHHHHHHHHHhCCCceEEEC
Confidence 777 7889999999999988777766
No 147
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=98.59 E-value=6.5e-09 Score=100.14 Aligned_cols=103 Identities=12% Similarity=-0.077 Sum_probs=75.8
Q ss_pred cccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecC--CCCccchhh--hhhhhccceeeeeEeecc
Q 018198 5 VLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGD--ESGILSRID--GVFTRRNCNIESLGVIGL 80 (359)
Q Consensus 5 ~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~--~G~~lsp~~--a~l~~RG~~tl~lr~~~~ 80 (359)
.++|+++|+|++++|+||+++||++.++|.++++.+.+.+ +...... .|..+++.. +++.+||++++..|+
T Consensus 210 ~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~--l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~--- 284 (409)
T 3jzl_A 210 YQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDL--CGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVT--- 284 (409)
T ss_dssp SCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHH--HHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHH---
T ss_pred cCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHH--HHHHhccccccccccccHHHHHHHHHHHhhHHHHH---
Confidence 4689999999999999999999999999999988654422 2221111 222233333 578999999999999
Q ss_pred cCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeeccCCCCCCCc
Q 018198 81 NKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQSSSSSLEP 126 (359)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~~~~~~~el 126 (359)
+++ .+++..++++|+++.. +| +...+++..++
T Consensus 285 --~~~---------~~~a~~la~~L~~~g~--~v-~p~~~~~~~~~ 316 (409)
T 3jzl_A 285 --AQA---------IKGARFTAAMLAEFGV--EA-DPVWDAPRTDL 316 (409)
T ss_dssp --HHH---------HHHHHHHHHHHHHTTC--EE-ESCTTSCCSSS
T ss_pred --HHH---------HHHHHHHHHHHHhCCC--cc-cCCCCCCCccE
Confidence 888 8999999999999875 55 43334444444
No 148
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=98.59 E-value=3.1e-09 Score=101.80 Aligned_cols=100 Identities=28% Similarity=0.357 Sum_probs=82.9
Q ss_pred CccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecC-CCCccchhhhhhhhccceeeeeEeeccc
Q 018198 3 PVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGD-ESGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 3 p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~-~G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
+.+..|+++|+|++++|++|+++||++.++|.++++++.+.+ .+...... .|+.++|+.+|...++++++..|+
T Consensus 192 ~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 266 (398)
T 1gc0_A 192 PYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDR-IRLQGLKDMTGAVLSPHDAALLMRGIKTLNLRM---- 266 (398)
T ss_dssp HHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHH-HHHTHHHHHTCCCCCHHHHHHHHHHHTTHHHHH----
T ss_pred cccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHH-HHHHHhhccCCCCCCHHHHHHHHhccchHHHHH----
Confidence 345678899999999999999999999999999887765432 22233344 688999999999999999998888
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+.. .++++.+.++|++++.+.++.+.
T Consensus 267 -~~~---------~~~~~~l~~~L~~~~~v~~v~~~ 292 (398)
T 1gc0_A 267 -DRH---------CANAQVLAEFLARQPQVELIHYP 292 (398)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTEEEEEEC
T ss_pred -HHH---------HHHHHHHHHHHhcCCCeeEEECC
Confidence 777 88999999999999999888764
No 149
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=98.56 E-value=1.3e-08 Score=97.91 Aligned_cols=100 Identities=26% Similarity=0.376 Sum_probs=82.9
Q ss_pred CccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCC-CCccchhhhhhhhccceeeeeEeeccc
Q 018198 3 PVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDE-SGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 3 p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~-G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
+.++.|+++|+|++++|+||+++||++.++|.++++++.+.+ .+....... |+.++++.+|...++++++..|+
T Consensus 190 ~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~-~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~---- 264 (404)
T 1e5e_A 190 PMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQ-IRMVGIKDITGSVISPHDAWLITRGLSTLNIRM---- 264 (404)
T ss_dssp TTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHH-HHHTCCCCCCCCCCCHHHHHHHHHHHTTHHHHH----
T ss_pred hhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHH-HHHHHHHhCCCCCCCHHHHHHHHHhHhHHHHHH----
Confidence 455679999999999999999999999988888887765531 233444555 78899999999999999988888
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+.. .+++++++++|++++.+.++.+.
T Consensus 265 -~~~---------~~~~~~l~~~l~~~~~v~~~~~~ 290 (404)
T 1e5e_A 265 -KAE---------SENAMKVAEYLKSHPAVEKVYYP 290 (404)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred -HHH---------HHHHHHHHHHHHhCCCeeEEECC
Confidence 777 88999999999999888777663
No 150
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.55 E-value=1e-08 Score=99.11 Aligned_cols=100 Identities=22% Similarity=0.232 Sum_probs=80.1
Q ss_pred CccccccccCCcEEEeeecccccCCcceeeeeeeecc-ccc----eeeEEE--------------------------Eee
Q 018198 3 PVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNS-ERV----QRHTIS--------------------------VFV 51 (359)
Q Consensus 3 p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~-~~~----~~~~l~--------------------------~~~ 51 (359)
++..+|+++|+|++++|++|+++||++.+||+++.++ ..+ .+ .+. ...
T Consensus 187 g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~-~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~ 265 (421)
T 2ctz_A 187 GYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYP-LLTEPQPGYHGLRLTEAFGELAFIVKARVDGL 265 (421)
T ss_dssp GTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCH-HHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHH
T ss_pred cccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchh-hhccccchhhhhhhhhhcchhHHHHHHHHHHH
Confidence 4456899999999999999999999999999988742 222 00 000 012
Q ss_pred cCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 52 GDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 52 ~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
..+|..++|+.+|+.++|++++..|+ +++ .+++++++++|++++.|..+.+.
T Consensus 266 ~~~g~~~~~~~a~~~~~~l~~l~~r~-----~~~---------~~~a~~l~~~L~~~p~v~~v~~p 317 (421)
T 2ctz_A 266 RDQGQALGPFEAWVVLLGMETLSLRA-----ERH---------VENTLHLAHWLLEQPQVAWVNYP 317 (421)
T ss_dssp HHHCCCCCHHHHHHHHHHHTTHHHHH-----HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred HhcCCCCCHHHHHHHHcCcchHHHHH-----HHH---------HHhHHHHHHHHHhCCCeeEEECC
Confidence 34688999999999999999999899 778 88999999999999999888653
No 151
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.40 E-value=1.6e-08 Score=96.91 Aligned_cols=96 Identities=30% Similarity=0.388 Sum_probs=78.2
Q ss_pred ccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCce
Q 018198 6 LRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRA 85 (359)
Q Consensus 6 ~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~ 85 (359)
.+|+++|+|++++|++|+++||++.++|.++++++.+.+ .+.......|+.++++++|+..++++++..|+ +..
T Consensus 187 ~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~-~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-----~~~ 260 (393)
T 1n8p_A 187 SNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYE-RLQFLQNAIGAIPSPFDAWLTHRGLKTLHLRV-----RQA 260 (393)
T ss_dssp CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHH-----HHH
T ss_pred CCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHH-HHHHHHHhcCCCCCHHHHHHHHhccchHHHHH-----HHH
Confidence 478899999999999999999999999998886444433 23333344688899999999999999988888 777
Q ss_pred EEEEEEECChhHHHHHHHHHhhhhc-eeeeee
Q 018198 86 LFTMVVFGTDRELQQVVKQLQKLVN-VLKVST 116 (359)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~L~k~~~-v~~v~~ 116 (359)
.++++++.++|++++. +.++.+
T Consensus 261 ---------~~~~~~l~~~L~~~~~~l~~v~~ 283 (393)
T 1n8p_A 261 ---------ALSANKIAEFLAADKENVVAVNY 283 (393)
T ss_dssp ---------HHHHHHHHHHHTSCTTTEEEEEC
T ss_pred ---------HHHHHHHHHHHHhCCCCceEEEC
Confidence 7899999999999877 766654
No 152
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=98.15 E-value=3.8e-07 Score=87.61 Aligned_cols=99 Identities=18% Similarity=0.233 Sum_probs=77.8
Q ss_pred ccccccccCCcEEEeeecccccCCcceeeeeeeeccc--------------------------cceeeEEEEee-cCCCC
Q 018198 4 VVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSE--------------------------RVQRHTISVFV-GDESG 56 (359)
Q Consensus 4 ~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~--------------------------~~~~~~l~~~~-~~~G~ 56 (359)
+.++|+++|+|++++|++|+++|+++.+||+++.+++ .+.+ .++... +..|.
T Consensus 184 ~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~r~~~~~~~g~ 262 (412)
T 2cb1_A 184 ALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPE-RVRTLGLSLCGM 262 (412)
T ss_dssp TSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHH-HHHHHHTTTTCC
T ss_pred ccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHH-HHHHHHHHhcCC
Confidence 4568899999999999999999999999998887743 1111 111122 44677
Q ss_pred ccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 57 ILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 57 ~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
.++|+.+|+..++++++.-|+ ++. .++.+++.++|++++.|..+.+.
T Consensus 263 ~~~~~~a~~~~~~l~~l~~~~-----~~~---------~~~~~~l~~~L~~~~~v~~v~~p 309 (412)
T 2cb1_A 263 ALSPFNAYLLFQGLETVALRV-----ARM---------SETARFLAERLQGHPKVKALRYP 309 (412)
T ss_dssp CCCHHHHHHHHHHGGGHHHHH-----HHH---------HHHHHHHHHHHHTCTTCSEEECT
T ss_pred CCChHHhHHHHcCCchHHHHH-----HHH---------HHHHHHHHHHHHcCCCeeEEECC
Confidence 889999999999999987777 666 68899999999998888777653
No 153
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=98.09 E-value=4.6e-07 Score=86.49 Aligned_cols=100 Identities=25% Similarity=0.359 Sum_probs=80.5
Q ss_pred CccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCC-CCccchhhhhhhhccceeeeeEeeccc
Q 018198 3 PVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDE-SGILSRIDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 3 p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~-G~~lsp~~a~l~~RG~~tl~lr~~~~~ 81 (359)
+.+..|+++|+|++++|++|+++|++.-++|.++++++.+.+ .+..+.... |+.++++.++...+.++++..|+
T Consensus 191 ~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 265 (398)
T 2rfv_A 191 PYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQ-ARFVGLKDITGGCMSPFNAWLTLRGVKTLGIRM---- 265 (398)
T ss_dssp TTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHH-HHHTHHHHTTCCCCCHHHHHHHHHHHTTHHHHH----
T ss_pred cccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHH-HHHHHHHhCCCCCCCHHHHHHHHhhhhhHHHHH----
Confidence 455578899999999999999999999998888887765431 223344455 78999999999999999887777
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+.. .++++.+.++|++++.+.++.+.
T Consensus 266 -~~~---------~~~~~~l~~~l~~~~~v~~~~~~ 291 (398)
T 2rfv_A 266 -ERH---------CENALKIARFLEGHPSITRVYYP 291 (398)
T ss_dssp -HHH---------HHHHHHHHHHHHTCTTEEEEECT
T ss_pred -HHH---------HHHHHHHHHHHHcCCCeeEEECC
Confidence 666 77999999999999888877653
No 154
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=98.04 E-value=0.00015 Score=62.87 Aligned_cols=173 Identities=13% Similarity=0.085 Sum_probs=96.0
Q ss_pred HhhhcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC---eE--EEEecCCcEEEEE-----E
Q 018198 157 RIFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS---TV--KVSFSDQSTFYAQ-----V 226 (359)
Q Consensus 157 ~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~---~~--~v~~~~g~~~~~~-----v 226 (359)
++...+.+-.|+|.....++.. ....|+..|..+ +.|...|...... .+ .+.. +|+.+... +
T Consensus 4 ~i~~~v~~N~~~i~~~~~~~~~------~~~~t~LgI~~r-~~lvP~H~~~~~~~~~~~~~~i~i-~g~~~~~~~~~v~~ 75 (212)
T 2hal_A 4 EIAGLVRKNLVQFGVGEKNGSV------RWVMNALGVKDD-WLLVPSHAYKFEKDYEMMEFYFNR-GGTYYSISAGNVVI 75 (212)
T ss_dssp HHHHHHHHHEEEEEEEETTSCC------EEEEEEEEEEBT-EEEEEGGGTTTSTTGGGEEEEEEE-TTEEEEEEGGGSEE
T ss_pred eehhhhhccEEEEEEeCCCCCc------ceEEEEEEEcCC-EEEEecccCcccccccccceEEEE-CCEEEeecccccee
Confidence 4455666777888886533221 236899999976 9999999975322 22 3333 55555443 2
Q ss_pred EEEc-CCCCEEEEEEcCCCCCccceE--ecCC-CCCCCCC-EEEEEecCCCCCCceeEe------EEeeeecccCCcccc
Q 018198 227 VGHD-QVNDLAVLHIDAPNHELRPIH--VSVS-ADLRVGK-KIYAIGHPLGWSFTCTTG------VISALDREIPGRLIQ 295 (359)
Q Consensus 227 ~~~d-~~~DlAll~v~~~~~~~~~~~--l~~~-~~~~~G~-~v~~iG~p~~~~~~~~~G------~vs~~~~~~~~~~~~ 295 (359)
...| ...||++++++..+ .++.+. +.+. +....++ .+.+++...+.+..+..+ .++...-...+....
T Consensus 76 ~~~d~~~~Dl~lv~Lp~~~-~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 154 (212)
T 2hal_A 76 QSLDVGFQDVVLMKVPTIP-KFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYVHKKNDGTTVD 154 (212)
T ss_dssp ECSSSSCCSEEEEECTTSC-CBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEEEEECTTSCEEE
T ss_pred EeccCCCceEEEEECCCCC-ccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeEEEecCCCcccc
Confidence 2233 46899999997633 222221 1111 1112222 233332111111111111 111111112232233
Q ss_pred ----cEEEEcccCCCCCccceeecC----CCeEEEEEeeecCCCcceeEEEEehH
Q 018198 296 ----GVIQIDASVNLGNSGGPLLDS----SGSLIGVNTFITSGAFSGIGFALPID 342 (359)
Q Consensus 296 ----~~i~~~~~~~~G~SGgPl~~~----~G~viGi~~~~~~~~~~~~~~aip~~ 342 (359)
..+..++++.+|+-||||+.. .|+++|||+++. .+.+||.|+.
T Consensus 155 ~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~----g~~G~a~~lt 205 (212)
T 2hal_A 155 LTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG----NSILVAKLVT 205 (212)
T ss_dssp EEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE----TTEEEEEECC
T ss_pred cccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC----CCcEEEEeec
Confidence 568889999999999999974 799999999984 2367888753
No 155
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.82 E-value=0.0008 Score=57.09 Aligned_cols=143 Identities=13% Similarity=0.176 Sum_probs=82.9
Q ss_pred eEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEE--EEEEcC---CCCEEEEEEcCCCCCccceE--ecCCCCCC
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQ--VVGHDQ---VNDLAVLHIDAPNHELRPIH--VSVSADLR 259 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~--v~~~d~---~~DlAll~v~~~~~~~~~~~--l~~~~~~~ 259 (359)
.-||..|-++ ++|.+.|...+ ..+.+ +|+.+... ....+. ..||++++++.... ++-+. +.+ ....
T Consensus 24 ~ft~LgI~dr-~~lvP~Ha~~~-~ti~i---~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~~k-FRDIr~~~~~-~~~~ 96 (190)
T 3zve_A 24 EFTMLGVHDR-VAVIPTHASVG-ETIYI---NDVETKVLDACALRDLTDTNLEITIVKLDRNQK-FRDIRHFLPR-YEDD 96 (190)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCC-SEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEECCSSC-BCCCGGGSCS-SCCC
T ss_pred EEEEEEEeCC-EEEEecCCCCC-cEEEE---CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCCcc-cCchHHhccc-cCCC
Confidence 4678888866 99999997643 23332 34333221 111232 34999999987542 33221 222 1222
Q ss_pred CCCEEEEEecCCCCCCceeEeEEeeeecc-cCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEE
Q 018198 260 VGKKIYAIGHPLGWSFTCTTGVISALDRE-IPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFA 338 (359)
Q Consensus 260 ~G~~v~~iG~p~~~~~~~~~G~vs~~~~~-~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~a 338 (359)
..+.+.++-.+......+..|.+...... ..+......+.+++++.+|+-||||+ .+|+++||++++. ...+|+
T Consensus 97 ~~~~~l~i~s~~~~~~~~~v~~v~~~~~i~l~g~~~~~~~~Y~~pT~~G~CG~~li-~~gkI~GiHvaG~----G~~g~~ 171 (190)
T 3zve_A 97 YNDAVLSVHTSKFPNMYIPVGQVTNYGFLNLGGTPTHRILMYNFPTRAGQCGGVVT-TTGKVIGIHVGGN----GAQGFA 171 (190)
T ss_dssp EEEEEEEECSSSCSSEEEEEEEEEEEEEEEETTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC----SSCEEE
T ss_pred CCCeEEEEECCCCcceEEecccceEeceeecCCCeeeeeEEEecCCCCCccCCeEE-ECCCEEEEEECcC----CCceEe
Confidence 33344444333222222333444433321 12445567788999999999999999 5799999999983 235777
Q ss_pred Eeh
Q 018198 339 LPI 341 (359)
Q Consensus 339 ip~ 341 (359)
.++
T Consensus 172 ~~l 174 (190)
T 3zve_A 172 AML 174 (190)
T ss_dssp EEC
T ss_pred hhh
Confidence 664
No 156
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=97.80 E-value=1.8e-06 Score=79.91 Aligned_cols=97 Identities=30% Similarity=0.393 Sum_probs=75.1
Q ss_pred cccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecC-CCCccchhhhhhhhccceeeeeEeecccCC
Q 018198 5 VLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGD-ESGILSRIDGVFTRRNCNIESLGVIGLNKD 83 (359)
Q Consensus 5 ~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~-~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~ 83 (359)
+..|+++|+|+++.|++|+++|++.-++|.++++++.+.+ .+...... .|+..+++.+|...++++.+..|+ +
T Consensus 128 ~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 201 (331)
T 1pff_A 128 LTNPLDLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAK-VKSQGIKDITGAIISPHDAWLITRGTLTLDMRV-----K 201 (331)
T ss_dssp HCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHH-HHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-----H
T ss_pred cCChhhcCCcEEEEECccccCCCCCceEEEEEeCcHHHHH-HHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHH-----H
Confidence 3467789999999999999999998878888887633322 23334444 577899999999999998877777 6
Q ss_pred ceEEEEEEECChhHHHHHHHHHhhhhceeeeee
Q 018198 84 RALFTMVVFGTDRELQQVVKQLQKLVNVLKVST 116 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~ 116 (359)
.. .++++++.++|++++++.++.+
T Consensus 202 ~~---------~~~~~~~~~~l~~~~~l~~~~~ 225 (331)
T 1pff_A 202 RA---------AENAQKVAEFLHEHKAVKKVYY 225 (331)
T ss_dssp HH---------HHHHHHHHHHHHHCTTCCCEEC
T ss_pred HH---------HHHHHHHHHHHHcCCCeeEEEC
Confidence 66 7789999999999877665544
No 157
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.80 E-value=0.0028 Score=53.36 Aligned_cols=157 Identities=13% Similarity=0.140 Sum_probs=93.9
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEE-E-Ec---CCCCEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVV-G-HD---QVNDLA 236 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~-~-~d---~~~DlA 236 (359)
+++.++.|++.. +.=||+.|-++ ..|-..|...+ +.+.+ +|+.++..-. . .+ ...||+
T Consensus 15 ~~~N~~~vtt~~------------g~ft~LgI~dr-~~vvP~Ha~~~-~~i~i---~g~~~~v~d~~~L~~~~g~~~Elt 77 (187)
T 3qzr_A 15 LRRNVRQVQTDQ------------GHFTMLGVRDR-LAVLPRHSQPG-KTIWI---EHKLVNVLDAVELVDEQGVNLALT 77 (187)
T ss_dssp HHHHEEEEEETT------------EEEEEEEEEBT-EEEEEGGGCCC-SEEEE---TTEEEEEEEEEECCCTTCCCCSEE
T ss_pred HHcCeEEEEECC------------CeEEEEEEeee-EEEEeCCCCCC-CEEEE---CCEEEEeeeeEEEECCCCCEEEEE
Confidence 345677777632 23588888765 89999998433 44333 5666554211 1 12 246999
Q ss_pred EEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCc-eeEeEEeeeec-ccCCcccccEEEEcccCCCCCccceee
Q 018198 237 VLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFT-CTTGVISALDR-EIPGRLIQGVIQIDASVNLGNSGGPLL 314 (359)
Q Consensus 237 ll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~-~~~G~vs~~~~-~~~~~~~~~~i~~~~~~~~G~SGgPl~ 314 (359)
+++++...+ ++-+.---.+....-..+.++-.....+.. +..|.+..... ...+......+.++.++.+|+-||+|+
T Consensus 78 ~v~l~~~~k-fRDIrkfi~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~inlsg~~t~r~l~Y~~pTk~G~CGgvl~ 156 (187)
T 3qzr_A 78 LITLDTNEK-FRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGGVVT 156 (187)
T ss_dssp EEEECSSCC-BCCCGGGSCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEEEETTEEEEEEEEESSCCCTTCTTCEEE
T ss_pred EEEcCCCcc-ccchHHhCccCcCCCCceEEEEEcCCCcceEEEeccEEEeceEeCCCCccccEEEECCCCCCCccCCeEE
Confidence 999987543 332221011222222244555444433333 34466555422 223445567899999999999999999
Q ss_pred cCCCeEEEEEeeecCCCcceeEEEEeh
Q 018198 315 DSSGSLIGVNTFITSGAFSGIGFALPI 341 (359)
Q Consensus 315 ~~~G~viGi~~~~~~~~~~~~~~aip~ 341 (359)
. .|+++||++++. ...+|+.++
T Consensus 157 ~-~gkIiGIHvaGn----G~~G~~a~L 178 (187)
T 3qzr_A 157 S-VGKIIGIHIGGN----GRQGFCAGL 178 (187)
T ss_dssp E-TTEEEEEEEEEC----SSCEEEEEC
T ss_pred e-cCcEEEEEECCC----CCcEEEEEe
Confidence 5 899999999972 245676664
No 158
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.79 E-value=2.8e-06 Score=80.61 Aligned_cols=98 Identities=26% Similarity=0.318 Sum_probs=76.3
Q ss_pred ccccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCC
Q 018198 4 VVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKD 83 (359)
Q Consensus 4 ~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~ 83 (359)
....|+++|+|+++.|++|+++|++..++|.++++++.+.+ .+.......++..+++.+|...++++.+..|+ +
T Consensus 180 ~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 253 (386)
T 1cs1_A 180 ALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAWWANNIGVTGGAFDSYLLLRGLRTLVPRM-----E 253 (386)
T ss_dssp TTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHHHHHHHTCBCCHHHHHHHHHHHTTHHHHH-----H
T ss_pred ccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHH-HHHHHHHhcCCCCCHHHHHHHHhcccHHHHHH-----H
Confidence 34467889999999999999999999988888887644332 22233344567889999999999988776666 6
Q ss_pred ceEEEEEEECChhHHHHHHHHHhhhhceeeeee
Q 018198 84 RALFTMVVFGTDRELQQVVKQLQKLVNVLKVST 116 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~ 116 (359)
.. .++.+++.++|++++.+.++.+
T Consensus 254 ~~---------~~~~~~l~~~l~~~~~l~~~~~ 277 (386)
T 1cs1_A 254 LA---------QRNAQAIVKYLQTQPLVKKLYH 277 (386)
T ss_dssp HH---------HHHHHHHHHHHTTCTTEEEEEC
T ss_pred HH---------HHHHHHHHHHHhcCCCeEEEEC
Confidence 66 7789999999999888776654
No 159
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.77 E-value=0.0022 Score=53.95 Aligned_cols=157 Identities=12% Similarity=0.108 Sum_probs=93.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEE--EEEcC---CCCEE
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQV--VGHDQ---VNDLA 236 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v--~~~d~---~~DlA 236 (359)
+++.++.|++.. +.-||.-|-++ ..|-..|.-. .+.+.| +|+.++..- .-.+. ..||+
T Consensus 13 ~k~N~~~vtT~~------------G~ft~LgI~dr-~~vvPtHa~~-~~~i~i---~G~~~~v~d~~~L~~~~g~~lElt 75 (191)
T 3q3y_A 13 MKRNASTVKTEY------------GEFTMLGIYDR-WAVLPRHAKP-GPTILM---NDQEVGVLDAKELVDKDGTNLELT 75 (191)
T ss_dssp HHHHEEEEEETT------------EEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEEEECTTCCEEEEE
T ss_pred HHcCeEEEEECC------------CcEEEEEEece-EEEEECCCCC-CCEEEE---CCEEEEeeeEEEEEcCCCCEEEEE
Confidence 345677777632 23578888755 8999999833 333333 566665411 11232 34999
Q ss_pred EEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCc-eeEeEEeeeec-ccCCcccccEEEEcccCCCCCccceee
Q 018198 237 VLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFT-CTTGVISALDR-EIPGRLIQGVIQIDASVNLGNSGGPLL 314 (359)
Q Consensus 237 ll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~-~~~G~vs~~~~-~~~~~~~~~~i~~~~~~~~G~SGgPl~ 314 (359)
+++++...+ ++-+.---.+.........++-.-...+.. +..|.+..... ...+.....++.+++++..|.-||+|+
T Consensus 76 ~v~l~~~~k-FRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~inlsg~~t~r~l~Y~~pTk~G~CGgvL~ 154 (191)
T 3q3y_A 76 LLKLNRNEK-FRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFLNLGGTPTKRMLVYNFPTRAGQCGGVLM 154 (191)
T ss_dssp EEEEECSSC-BCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEEEETTEEEEEEEEEESCCCTTCTTCEEE
T ss_pred EEECCCCcc-ccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcceEeCCCCcccCEEEecCCCCCCccCCEEE
Confidence 999987553 332221012222333334444444333333 34466655322 223445567899999999999999999
Q ss_pred cCCCeEEEEEeeecCCCcceeEEEEeh
Q 018198 315 DSSGSLIGVNTFITSGAFSGIGFALPI 341 (359)
Q Consensus 315 ~~~G~viGi~~~~~~~~~~~~~~aip~ 341 (359)
. .|+++||++++. ...+|+.++
T Consensus 155 ~-~gkIiGIHvgGn----G~~Gfaa~L 176 (191)
T 3q3y_A 155 S-TGKVLGIHVGGN----GHQGFSAAL 176 (191)
T ss_dssp E-TTEEEEEEEEEE----TTEEEEEEC
T ss_pred e-CCCEEEEEECCC----CcceEEeeh
Confidence 5 799999999872 345676654
No 160
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=97.76 E-value=2.1e-06 Score=83.17 Aligned_cols=89 Identities=12% Similarity=-0.079 Sum_probs=69.6
Q ss_pred ccccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEE--eecCCCCccch--hhhhhhhccceeeeeEeeccc
Q 018198 6 LRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISV--FVGDESGILSR--IDGVFTRRNCNIESLGVIGLN 81 (359)
Q Consensus 6 ~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~--~~~~~G~~lsp--~~a~l~~RG~~tl~lr~~~~~ 81 (359)
.+|+++|+|+++.|++|+++||.+..||.++++.+.+.+ +.. .....|...++ ..+++.++|++++..|+
T Consensus 217 ~~~~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~--l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~---- 290 (431)
T 3ht4_A 217 QEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEA--CAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVA---- 290 (431)
T ss_dssp CCGGGTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHH--HHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHH----
T ss_pred CCccccCCeEEEcCccccCCCCCCCceEEEEecHHHHHH--HHHHhccCCcccccCccHHHHHHHHhHhhhHHHHH----
Confidence 689999999999999999999999999999887654322 222 22234444444 34788999999998888
Q ss_pred CCceEEEEEEECChhHHHHHHHHHhhhhc
Q 018198 82 KDRALFTMVVFGTDRELQQVVKQLQKLVN 110 (359)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~L~k~~~ 110 (359)
++. .+++..++++|+++.-
T Consensus 291 -~~~---------~~~a~~l~~~L~~~g~ 309 (431)
T 3ht4_A 291 -GQA---------LKGAIFTAAFLEKLGM 309 (431)
T ss_dssp -HHH---------HHHHHHHHHHHHHHTC
T ss_pred -HHH---------HHHHHHHHHHHHhCcC
Confidence 778 8899999999999864
No 161
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.72 E-value=0.0013 Score=55.44 Aligned_cols=143 Identities=14% Similarity=0.202 Sum_probs=84.7
Q ss_pred ceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEE--EEEcC---CCCEEEEEEcCCCCCccceE--ecCCCCC
Q 018198 186 GSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQV--VGHDQ---VNDLAVLHIDAPNHELRPIH--VSVSADL 258 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v--~~~d~---~~DlAll~v~~~~~~~~~~~--l~~~~~~ 258 (359)
+.-||.-|-++ +.|-..|... .+++.| +|..++..- ...+. ..||++++++..++ ++-+. +. +..
T Consensus 30 G~ft~LgI~d~-~~viP~Ha~p-~~~i~i---~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~k-FRDIr~fi~--~~~ 101 (190)
T 4dcd_A 30 GEFTMLGVHDN-VAILPTHASP-GESIVI---DGKEVEILDAKALEDQAGTNLEITIITLKRNEK-FRDIRPHIP--TQI 101 (190)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEESSSCC-BCCCGGGSC--SSC
T ss_pred eEEEEEEEECc-EEEEeCCCCC-CcEEEE---CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCcc-ccchhHhcc--ccC
Confidence 35688888866 9999999643 234443 355544321 12232 35999999998643 33322 21 122
Q ss_pred CCCCEEEEEecCCCCCCc-eeEeEEeeeecc-cCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecCCCcceeE
Q 018198 259 RVGKKIYAIGHPLGWSFT-CTTGVISALDRE-IPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIG 336 (359)
Q Consensus 259 ~~G~~v~~iG~p~~~~~~-~~~G~vs~~~~~-~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~ 336 (359)
....+++.+=+-...+.. +..|.+...... ..+......+.++++..+|+-||||+ .+|+++||++++. ...+
T Consensus 102 ~~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~lsg~~t~r~l~Y~~pT~~G~CGg~l~-~~gkIlGIHvaG~----G~~G 176 (190)
T 4dcd_A 102 TETNDGVLIVNTSKYPNMYVPVGAVTEQGYLNLGGRQTARTLMYNFPTRAGQCGGVIT-CTGKVIGMHVGGN----GSHG 176 (190)
T ss_dssp CCEEEEEEEECSSSSTTEEEEEEEEEEEEEEEETTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC----SSCE
T ss_pred CCCCceEEEEecCCCccEEEEeeeeEEeccccCCCCcccceEEEccCCCCCccCCEEE-eCCCEEEEEECCC----CCce
Confidence 233444443333233333 233444433321 22445567889999999999999999 5799999999983 2456
Q ss_pred EEEeh
Q 018198 337 FALPI 341 (359)
Q Consensus 337 ~aip~ 341 (359)
|+.++
T Consensus 177 ~aa~L 181 (190)
T 4dcd_A 177 FAAAL 181 (190)
T ss_dssp EEEEC
T ss_pred Eeeeh
Confidence 76654
No 162
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.64 E-value=0.0014 Score=55.15 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=83.3
Q ss_pred EEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEE--EEEEEcC---CCCEEEEEEcCCCCCccce--EecCCCCCCC
Q 018198 188 GAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYA--QVVGHDQ---VNDLAVLHIDAPNHELRPI--HVSVSADLRV 260 (359)
Q Consensus 188 GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~--~v~~~d~---~~DlAll~v~~~~~~~~~~--~l~~~~~~~~ 260 (359)
-||..|.++ +.|...|...+. .+ .+ +|+.+.. ...-.|. ..||++++++...+ ++-+ -+.+... ..
T Consensus 25 ~t~LgI~d~-~~vvP~Ha~~~~-~i--~i-~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~k-fRDIrkfi~~~~~-~~ 97 (182)
T 2b0f_A 25 FTGLGIHDR-VCVIPTHAQPGD-DV--LV-NGQKIRVKDKYKLVDPENINLELTVLTLDRNEK-FRDIRGFISEDLE-GV 97 (182)
T ss_dssp EEEEEEEBT-EEEEESTTCCCS-EE--EE-TTEEEEEEEEEEEEETTTEEEEEEEEEECCSSC-BCCGGGTBCSSCC-CS
T ss_pred EEEEEEeee-EEEEecCCCCcc-EE--EE-CCEEEEeeeeeEEEcCCCCeeEEEEEECCCccc-ccchHHhcCCCCC-CC
Confidence 478888866 999999997653 33 32 4554322 1112232 57999999987553 2221 1222222 12
Q ss_pred CCEEEEEecCCCCCC-ceeEeEEeeeecc-cCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecCCCcceeEEE
Q 018198 261 GKKIYAIGHPLGWSF-TCTTGVISALDRE-IPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGFA 338 (359)
Q Consensus 261 G~~v~~iG~p~~~~~-~~~~G~vs~~~~~-~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~a 338 (359)
+.+.++ +-...+. .+..|.+...... ..+......+..++++.+|+-||||+. +|+++|||+++. ...+|+
T Consensus 98 -~~~lv~-n~~~~p~~~~~vg~~~~~g~i~l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG~----G~~Gfa 170 (182)
T 2b0f_A 98 -DATLVV-HSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGGN----GRQGFS 170 (182)
T ss_dssp -EEEEEE-ESSSCEEEEEEEEEEEEEEEEEETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEEE----TTEEEE
T ss_pred -ceEEEE-EcCCCceEEEEecceEEeceEcCCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeCCC----CCceEe
Confidence 334444 3222222 2245554442211 224445678889999999999999994 889999999972 346777
Q ss_pred Eeh
Q 018198 339 LPI 341 (359)
Q Consensus 339 ip~ 341 (359)
.++
T Consensus 171 a~l 173 (182)
T 2b0f_A 171 AQL 173 (182)
T ss_dssp EEC
T ss_pred hhh
Confidence 664
No 163
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.59 E-value=0.0053 Score=51.60 Aligned_cols=142 Identities=15% Similarity=0.134 Sum_probs=83.8
Q ss_pred eEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEE--EEEEcC---CCCEEEEEEcCCCCCccceE--ecCCCCCC
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQ--VVGHDQ---VNDLAVLHIDAPNHELRPIH--VSVSADLR 259 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~--v~~~d~---~~DlAll~v~~~~~~~~~~~--l~~~~~~~ 259 (359)
.-|+.-|..+ +.|-..|...+. .+.+ +|+.+... ...+|+ ..||++++++..++ ++-+. +.+ ...
T Consensus 24 ~~t~Lgi~~~-~~lvP~Ha~~~~-~i~i---~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~k-frDi~kfip~--~~~ 95 (180)
T 1cqq_A 24 KFTGLGVYDR-FVVVPTHADPGK-EIQV---DGITTKVIDSYDLYNKNGIKLEITVLKLDRNEK-FRDIRRYIPN--NED 95 (180)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCCS-EEEE---TTEEEEEEEEEEEECTTSCEEEEEEEEECSSCC-BCCGGGGSCS--SCC
T ss_pred cEEEEEEeeE-EEEEccCcCccc-EEEE---CCEEEEeccceEEEcCCCCeEEEEEEEcCCccc-cCccHhhcCC--CcC
Confidence 3677888866 999999998874 3322 45444332 223342 35999999987543 33222 221 111
Q ss_pred CCCEEEEEecCCCCCC-ceeEeEEeeeecc-cCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecCCCcceeEE
Q 018198 260 VGKKIYAIGHPLGWSF-TCTTGVISALDRE-IPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGF 337 (359)
Q Consensus 260 ~G~~v~~iG~p~~~~~-~~~~G~vs~~~~~-~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~ 337 (359)
.....+.+-+-...+. -+..|.+...... ..+......+..++++.+|+-||+|+ .+|+++|||+++ . ...+|
T Consensus 96 ~~~~~~l~~n~~~~~~~~v~~g~~~~~g~i~~~g~~~~r~l~Y~~pT~~G~CGsvl~-~~gkIiGIHvAG-~---G~~G~ 170 (180)
T 1cqq_A 96 DYPNCNLALLANQPEPTIINVGDVVSYGNILLSGNQTARMLKYSYPTKSGYCGGVLY-KIGQVLGIHVGG-N---GRDGF 170 (180)
T ss_dssp CEEEEEEEECTTSSSCEEEEEEEEEECCCEEETTEEECSEEEECCCCCTTCTTCEEE-ETTEEEEEEEEE-C---SSCEE
T ss_pred CCCceEEEEEcCCCceEEEEccceeeeeeEecCCcEeccEEEecCCCCCCcCCCeEE-ECCCEEEEEECC-C---CCcEE
Confidence 1122333333222233 2444544432211 12444557899999999999999999 568999999998 2 34677
Q ss_pred EEeh
Q 018198 338 ALPI 341 (359)
Q Consensus 338 aip~ 341 (359)
+.++
T Consensus 171 aa~l 174 (180)
T 1cqq_A 171 SAML 174 (180)
T ss_dssp EEEC
T ss_pred Eeee
Confidence 7664
No 164
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=97.57 E-value=0.00033 Score=60.61 Aligned_cols=146 Identities=15% Similarity=0.209 Sum_probs=83.9
Q ss_pred eEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEE---EEEE----EEcCC---CCEEEEEEcCCCCCccceE--ecC
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFY---AQVV----GHDQV---NDLAVLHIDAPNHELRPIH--VSV 254 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~---~~v~----~~d~~---~DlAll~v~~~~~~~~~~~--l~~ 254 (359)
.-+|..|-.+ +.|...|...+... .+.+ +++.+. ..+. ..+.+ .||++++++.... ++-+. +.+
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~~~-~i~i-~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~k-frdi~k~f~~ 106 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEKYD-KIML-DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNK-VRDITKHFRD 106 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSCCS-EEEE-TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSCC-BCCCGGGBCS
T ss_pred EEEEeeEcCC-EEEEEcccCCCCCc-EEEE-cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCcc-cCchhhhccc
Confidence 3566778766 89999999866321 3333 233332 1222 23333 7999999976432 22221 222
Q ss_pred CCCCCCCCEEEEEecCCCCCCceeEeEEeeeeccc---CCcccccEEEEcccCCCCCccceeecC---CCeEEEEEeeec
Q 018198 255 SADLRVGKKIYAIGHPLGWSFTCTTGVISALDREI---PGRLIQGVIQIDASVNLGNSGGPLLDS---SGSLIGVNTFIT 328 (359)
Q Consensus 255 ~~~~~~G~~v~~iG~p~~~~~~~~~G~vs~~~~~~---~~~~~~~~i~~~~~~~~G~SGgPl~~~---~G~viGi~~~~~ 328 (359)
......++++..+-++......+..|.+....... .+......+.+++++.+|+-||+|+-. .|+++|||+++.
T Consensus 107 ~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHvaG~ 186 (209)
T 2bhg_A 107 TARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVSMDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAGG 186 (209)
T ss_dssp SCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC-----CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEEEEE
T ss_pred ccccCCCCeEEEEeccCccCceeeeeeEEEccceeeecCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEEccC
Confidence 11113455577666655332333355444333322 233456789999999999999999643 689999999983
Q ss_pred CCCcceeEEEEe
Q 018198 329 SGAFSGIGFALP 340 (359)
Q Consensus 329 ~~~~~~~~~aip 340 (359)
.+.+|+.+
T Consensus 187 ----g~~G~aa~ 194 (209)
T 2bhg_A 187 ----NGVGYCSC 194 (209)
T ss_dssp ----TTEEEEEE
T ss_pred ----CCceEEEE
Confidence 23455544
No 165
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.32 E-value=0.00095 Score=48.17 Aligned_cols=37 Identities=16% Similarity=0.037 Sum_probs=27.4
Q ss_pred CCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCC
Q 018198 162 NISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGAS 210 (359)
Q Consensus 162 ~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~ 210 (359)
..|..|.|... . ...|.|.+|+++ ||||+|||+.+..
T Consensus 11 ~~Pw~v~l~~~----~-------~~~CgGslIs~~-~VLTAAHC~~~~~ 47 (80)
T 2pka_A 11 SHPWQVAIYHY----S-------SFQCGGVLVNPK-WVLTAAHCKNDNY 47 (80)
T ss_dssp SCTTEEEEEET----T-------EEEEEEEEEETT-EEEECGGGCCSCC
T ss_pred CCCcEEEEEEC----C-------ceEEEEEEEcCC-EEEECHHHCCCCc
Confidence 34677777532 1 236999999987 9999999997643
No 166
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=96.86 E-value=0.033 Score=56.27 Aligned_cols=142 Identities=14% Similarity=0.191 Sum_probs=80.8
Q ss_pred eEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEE--EEEEcC---CCCEEEEEEcCCCCCccceE--ecCCCCCC
Q 018198 187 SGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQ--VVGHDQ---VNDLAVLHIDAPNHELRPIH--VSVSADLR 259 (359)
Q Consensus 187 ~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~--v~~~d~---~~DlAll~v~~~~~~~~~~~--l~~~~~~~ 259 (359)
.-+|..|..+ .+|...|...+. .+.+ +|..+... ...++. ..||+++++..... ++.+. +.+.. .
T Consensus 24 ~~~~l~i~~~-~~l~p~H~~~~~-~~~i---~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~-frdi~~~~~~~~--~ 95 (644)
T 2ijd_1 24 EFTMLGVHDN-VAILPTHASPGE-SIVI---DGKEVAILAAKALADQAGTNLEITIITLKRNEK-FRDIRPHIPTQI--T 95 (644)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCCS-EEEE---TTEEEEEEECCEEECTTSCEEEEEEEEECSSCC-BCCCGGGSCSSC--C
T ss_pred EEEEEEEece-EEEEccccCCCc-eEEE---CCEEEEeccceeEEcCCCCceeEEEEECCCCCC-cCChHHhccCCc--c
Confidence 3567778766 999999988653 3322 23333211 112344 35999999975432 33222 21111 1
Q ss_pred CCCEEEEEecCCCCCC-ceeEeEEeeeec-ccCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeeecCCCcceeEE
Q 018198 260 VGKKIYAIGHPLGWSF-TCTTGVISALDR-EIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFITSGAFSGIGF 337 (359)
Q Consensus 260 ~G~~v~~iG~p~~~~~-~~~~G~vs~~~~-~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~~~~~~~~~ 337 (359)
......++-.-.+... .+..|.+..... ...+......+..+.++.+|+-|+||+. +|+|||||+++. ...+|
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG~----g~~g~ 170 (644)
T 2ijd_1 96 ETNDGVLIVNTSKYPNMYVPVGAVTEQGYLNLGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHVGGN----GSHGF 170 (644)
T ss_dssp CEEEEEEEECSSSSTTEEEEEEEEEEEEEECCTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEEEEC----SSCEE
T ss_pred CCCceEEEEcCCCCceEEEEeeeeeeccceecCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEEcCC----CCceE
Confidence 2222333222222222 234555554322 1224445577889999999999999995 799999999983 23466
Q ss_pred EEeh
Q 018198 338 ALPI 341 (359)
Q Consensus 338 aip~ 341 (359)
+.++
T Consensus 171 a~~l 174 (644)
T 2ijd_1 171 AAAL 174 (644)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6664
No 167
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=96.58 E-value=0.0045 Score=46.39 Aligned_cols=51 Identities=29% Similarity=0.471 Sum_probs=36.7
Q ss_pred cCCCCCccceeecC-CC--eEEEEEeeecCCC-cceeEEEEehHHHHHHHHHHHh
Q 018198 303 SVNLGNSGGPLLDS-SG--SLIGVNTFITSGA-FSGIGFALPIDTVRGIVDQLVK 353 (359)
Q Consensus 303 ~~~~G~SGgPl~~~-~G--~viGi~~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 353 (359)
..|.|||||||+-. +| .++||++++.... ...-+...-+...++|+++.++
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~WI~~~~~ 95 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA 95 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHHHHHHHc
Confidence 57889999999843 22 7999999986322 1234566778888888887654
No 168
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=96.38 E-value=0.018 Score=41.74 Aligned_cols=71 Identities=20% Similarity=0.369 Sum_probs=59.3
Q ss_pred EEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEE-CChhHHHHHHHHHhhhhceeeeeec
Q 018198 46 TISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVF-GTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 46 ~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~-~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
.+.....+..|.++.+...|...|+|+.+++...... ...+++.+. .+.+..+++.++|+++++|..|...
T Consensus 7 ~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~-~~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~~ 78 (88)
T 2ko1_A 7 GIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDG-IFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVERL 78 (88)
T ss_dssp EEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSS-EEEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred EEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCC-EEEEEEEEEECCHHHHHHHHHHHhcCCCceEEEEe
Confidence 5667788999999999999999999999999944333 556777665 4568889999999999999998775
No 169
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=96.01 E-value=0.044 Score=43.65 Aligned_cols=136 Identities=15% Similarity=0.181 Sum_probs=79.6
Q ss_pred ceEEEEEEeCCCEEEeccccc-CCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCC-CccceEecCCCCCCCCCE
Q 018198 186 GSGAGFLWDQDGHIVTNYHVI-CGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNH-ELRPIHVSVSADLRVGKK 263 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv-~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~-~~~~~~l~~~~~~~~G~~ 263 (359)
+.|-||.|++. ..+|+-||+ .+.+++. | .+...+..+..-+++.+++..+.. ++.-..|... ...|+-
T Consensus 15 gsgwgfwVS~~-~fiTaTHV~p~~~~eif-----G--~p~~~i~v~~~GEf~~~rfp~~~rpdvsgmiLEeg--~peGtV 84 (185)
T 4ash_A 15 GTGWGFWVSGH-VFITAKHVAPPKGTEIF-----G--RKPGDFTVTSSGDFLKYYFTSAVRPDIPAMVLENG--CQEGVV 84 (185)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCCTTCCBT-----T--BCTTSEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTCE
T ss_pred cCceEEEEccc-EEEEEEeecCCCchhhc-----C--CccceEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCcE
Confidence 47999999987 999999999 4443321 1 011123345567889999976542 4566666432 344776
Q ss_pred EEEE-ecCCCC--CCceeEeEEeeeecccCCcc---cccEEE-------EcccCCCCCccceeecCC---CeEEEEEeee
Q 018198 264 IYAI-GHPLGW--SFTCTTGVISALDREIPGRL---IQGVIQ-------IDASVNLGNSGGPLLDSS---GSLIGVNTFI 327 (359)
Q Consensus 264 v~~i-G~p~~~--~~~~~~G~vs~~~~~~~~~~---~~~~i~-------~~~~~~~G~SGgPl~~~~---G~viGi~~~~ 327 (359)
+.++ -.+.+. +..++.|.+...+- .+.. ...++. .|-...|||-|.|-+-.. -.|+|++.+.
T Consensus 85 ~svlikR~sgeliPlavRmgt~as~kI--qGk~v~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHtAa 162 (185)
T 4ash_A 85 ASVLVKRASGEMLALAVRMGSQAAIKI--GSAVVHGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHVAA 162 (185)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEEEE--TTEEEEEEEEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEecCCCCcceeEEEecceeeeEE--eeeEecceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEee
Confidence 6553 333332 22344454444321 1110 011222 244577999999998543 3699999998
Q ss_pred cCCCcc
Q 018198 328 TSGAFS 333 (359)
Q Consensus 328 ~~~~~~ 333 (359)
..+++.
T Consensus 163 tr~gNt 168 (185)
T 4ash_A 163 TRSGNT 168 (185)
T ss_dssp CSSSSE
T ss_pred ccCCCE
Confidence 866643
No 170
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=95.79 E-value=0.046 Score=57.20 Aligned_cols=80 Identities=21% Similarity=0.221 Sum_probs=51.0
Q ss_pred ceEEEEEEeCCCEEEecccccCCCCeEEEEecCC-cEEEEEEEEE-cCCCCEEEEEEcCCCCCccceEecCCC-------
Q 018198 186 GSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ-STFYAQVVGH-DQVNDLAVLHIDAPNHELRPIHVSVSA------- 256 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g-~~~~~~v~~~-d~~~DlAll~v~~~~~~~~~~~l~~~~------- 256 (359)
..|.+.+|++. ||+|.+|.... . .|.|.++ ..|.. +.+. .+..|+++.|+.....++.|+.+....
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-~--~v~fG~~~n~Y~i-V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~g~~~~~y~ 130 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-T--NVSFGDGENRYNI-VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQGAVAGAYL 130 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-C--EECCTTSCCCEEE-EECCBCSSSSCBCCEESSCCCSSCCCCBCSSCSCTTGGG
T ss_pred CCceEEEEcCc-EEEEeeecCCC-c--eEEeCCCcceEEE-EeeCCCCCCCeeeeecccccccccceeeccccCcccccc
Confidence 45888899987 99999996443 3 4566554 35544 2222 234599999999876666666654321
Q ss_pred CCCCCCEEEEEecC
Q 018198 257 DLRVGKKIYAIGHP 270 (359)
Q Consensus 257 ~~~~G~~v~~iG~p 270 (359)
..+.....+.+|..
T Consensus 131 d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 131 DKERYPVFYRLGSG 144 (1048)
T ss_dssp CTTTCCCEEEEECS
T ss_pred ccccCceEEEECCc
Confidence 13445566777754
No 171
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=95.13 E-value=0.13 Score=41.18 Aligned_cols=138 Identities=17% Similarity=0.227 Sum_probs=78.5
Q ss_pred ceEEEEEEeCCCEEEeccccc-CCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCC-CccceEecCCCCCCCCCE
Q 018198 186 GSGAGFLWDQDGHIVTNYHVI-CGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNH-ELRPIHVSVSADLRVGKK 263 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv-~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~-~~~~~~l~~~~~~~~G~~ 263 (359)
++|-||.|++. ..+|+-||+ .+.+++. | .+...+..+..-+++.+++..+.. ++.-+.|.. ....|.-
T Consensus 26 gsgwgfwVS~~-~fIT~tHV~p~~~~e~f-----G--~p~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEe--g~peGtV 95 (194)
T 2fyq_A 26 GSGWGFWVSPT-VFITTTHVVPTGVKEFF-----G--EPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEE--GCPEGTV 95 (194)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCSSCSEET-----T--EEGGGEEEEEETTEEEEEESSCSCTTSCCCEECS--SCCTTCE
T ss_pred cCceeEEEccc-EEEEEeeecCCCChhhc-----C--ceeeeEEEeecCcEEEEEcCCCcCCCCcceEEec--CCCCCcE
Confidence 47999999987 999999999 4444331 1 111224445667889999976542 455566643 2334776
Q ss_pred EEE-EecCCCC--CCceeEeEEeeeecccC-CcccccEEE-------EcccCCCCCccceeecCC---CeEEEEEeeecC
Q 018198 264 IYA-IGHPLGW--SFTCTTGVISALDREIP-GRLIQGVIQ-------IDASVNLGNSGGPLLDSS---GSLIGVNTFITS 329 (359)
Q Consensus 264 v~~-iG~p~~~--~~~~~~G~vs~~~~~~~-~~~~~~~i~-------~~~~~~~G~SGgPl~~~~---G~viGi~~~~~~ 329 (359)
+.+ +-.+.+. +..+..|.+...+-.-. -.....++. .|-...||+-|.|-+-.. --|+|++.+...
T Consensus 96 ~silikR~sgellPlaVRmgt~as~kIqGk~v~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~Aatr 175 (194)
T 2fyq_A 96 CSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAAATK 175 (194)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEEEEETTEEEEEEEEEECC-----------CGGGTTCEEEEEETTEEEEEEEEEEECS
T ss_pred EEEEEecCCCCcceEEEEecceeeeEEeeeEecceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEeecc
Confidence 654 3344443 23445555544421110 000011222 244567899999998553 369999999886
Q ss_pred CCcc
Q 018198 330 GAFS 333 (359)
Q Consensus 330 ~~~~ 333 (359)
+++.
T Consensus 176 sgNt 179 (194)
T 2fyq_A 176 SGNT 179 (194)
T ss_dssp SSSE
T ss_pred CCCE
Confidence 6543
No 172
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=94.90 E-value=0.0035 Score=59.09 Aligned_cols=82 Identities=12% Similarity=-0.035 Sum_probs=61.6
Q ss_pred CCcEEEeee--cccccCCcceeeeeeeeccccceeeEEEEeec------------CCCCccchhhhhhhhccceeeeeEe
Q 018198 12 GAGIVMHSA--SKFIARHSDVMACGIAVNSERVQRHTISVFVG------------DESGILSRIDGVFTRRNCNIESLGV 77 (359)
Q Consensus 12 g~d~~~~s~--tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~------------~~G~~lsp~~a~l~~RG~~tl~lr~ 77 (359)
.+|+.++|+ ||++++ ++ +|.++++++.+.+ .+..+.. -.+..++++.+++.+++++.+.-++
T Consensus 179 ~~d~~~~S~~~~K~l~~-g~--gG~~~~~~~~l~~-~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~ 254 (377)
T 3ju7_A 179 FSGMIIYSFHATKPFGI-GE--GGLIYSKNEEDIQ-RIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKL 254 (377)
T ss_dssp CSSEEEEECBTTSSSCC-BS--CEEEEESCHHHHH-HHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHH
T ss_pred CCcEEEEECCCCCcCCC-CC--cEEEEECCHHHHH-HHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 489999995 799998 64 7888887766543 1111111 1245689999999999999998888
Q ss_pred ecccCCceEEEEEEECChhHHHHHHHHHhhhhce
Q 018198 78 IGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v 111 (359)
++. .++++.+.+.|++++.+
T Consensus 255 -----~~~---------~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 255 -----KER---------TRISEWYKQLLQSNGLM 274 (377)
T ss_dssp -----HHH---------HHHHHHHHHHHHHTTTT
T ss_pred -----HHH---------HHHHHHHHHHhcCCCCc
Confidence 777 88999999999987643
No 173
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=94.00 E-value=0.075 Score=43.11 Aligned_cols=116 Identities=19% Similarity=0.244 Sum_probs=64.8
Q ss_pred ceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEE
Q 018198 186 GSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIY 265 (359)
Q Consensus 186 ~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~ 265 (359)
-.|-|+.- +|-+=|-+||-+++. +.. +++.+ .....|-..|++= .- -+-+|. ..-.-+++|.
T Consensus 20 Q~GVGv~~--~GVFHTmWHVTrGa~---l~~-~g~~~--~P~wa~V~~Dlis--YG------G~WkL~--~kW~g~~eVq 81 (172)
T 2fp7_B 20 QAGAGVMV--EGVFHTLWHTTKGAA---LMS-GEGRL--DPYWGSVKEDRLC--YG------GPWKLQ--HKWNGHDEVQ 81 (172)
T ss_dssp EEEEEEEE--TTEEEEEHHHHTTCC---EEE-TTEEE--CEEEEETTTTEEE--ES------SSCCCC--CCCCSSSCEE
T ss_pred eeeeEEee--CCEEEeeeeecCCce---EEE-CCcEe--cceeehheeceee--cC------CccccC--cccCCCceEE
Confidence 35667665 578999999988763 222 23332 2223355667642 11 122342 2333456777
Q ss_pred EEecCCCCCCce---eEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEEEEEeee
Q 018198 266 AIGHPLGWSFTC---TTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 266 ~iG~p~~~~~~~---~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~ 327 (359)
++-.+.+..... ..|...-. .. +.-.+..+..+|.||+|++|.+|+|||+--.+
T Consensus 82 l~a~~Pgk~~~n~qt~Pg~f~~~-----~G---eigaI~lD~p~GtSGSPIin~~G~vVGLYGNG 138 (172)
T 2fp7_B 82 MIVVEPGKNVKNVQTKPGVFKTP-----EG---EIGAVTLDYPTGTSGSPIVDKNGDVIGLYGNG 138 (172)
T ss_dssp EEECCTTSCCEEEEECCEEEEET-----TE---EEEEECCCCCGGGTTCEEECTTSCEEEESCCE
T ss_pred EEEECCCCceEEEEccCceEecC-----CC---eEEEEECCCCCCCCCCceEccCCcEEEEecce
Confidence 777766544322 22222111 11 12233345567999999999999999986555
No 174
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=93.96 E-value=0.076 Score=43.51 Aligned_cols=134 Identities=18% Similarity=0.210 Sum_probs=75.9
Q ss_pred cCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEE
Q 018198 161 ENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHI 240 (359)
Q Consensus 161 ~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v 240 (359)
++...|-+|.... .+. ..-.|-|+.- +|-+=|-+||-+++. +.. +++.+ .....|-..|++= .
T Consensus 16 ~l~dGvYRI~~~g----l~G---~~Q~GVGv~~--~GVFHTmWHVTrGa~---L~~-~g~~l--~P~wasV~~Dlis--Y 78 (185)
T 2ggv_B 16 DTTTGVYRIMTRG----LLG---SYQAGAGVMV--EGVFHTLWATTKGAA---LMS-GEGRL--DPYWGSVKEDRLC--Y 78 (185)
T ss_dssp CCCSEEEEEEEEC----SSS---EEEEEEEEEE--TTEEEECHHHHTTCC---EEE-TTEEE--CEEEEETTTTEEE--E
T ss_pred cCCCcEEEEEecc----ccc---cceeeeEEee--CCEEEeeeeecCcce---EEE-CCcEe--cceeehhhcceee--c
Confidence 4677888887643 221 2235666665 588999999988863 222 33333 2223455667642 1
Q ss_pred cCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCce---eEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCC
Q 018198 241 DAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTC---TTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSS 317 (359)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~---~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~ 317 (359)
- -+-+|. ..-.-+++|.++-++.+..... ..|...-. .. +.-.+..+...|.||+|++|.+
T Consensus 79 G------G~WkL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~-----~G---eigAI~lD~p~GTSGSPIin~~ 142 (185)
T 2ggv_B 79 G------GPWQLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTP-----EG---EIGAVTLDFPTGTSGSPIVDKN 142 (185)
T ss_dssp S------SSCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET-----TE---EEEEECCCCCGGGTTCEEECTT
T ss_pred C------CcccCc--cccCCCceEEEEEECCCCceEEEEccCceEecC-----CC---eEEEEECCCCCCCCCCceEcCC
Confidence 1 122342 2333457777777776644322 22222111 11 1223344556799999999999
Q ss_pred CeEEEEEeee
Q 018198 318 GSLIGVNTFI 327 (359)
Q Consensus 318 G~viGi~~~~ 327 (359)
|++||+--.+
T Consensus 143 G~vvGLYGNG 152 (185)
T 2ggv_B 143 GDVIGLYGNG 152 (185)
T ss_dssp SCEEEEEEEE
T ss_pred CcEEEEecce
Confidence 9999997666
No 175
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=93.89 E-value=0.11 Score=42.64 Aligned_cols=135 Identities=20% Similarity=0.279 Sum_probs=74.6
Q ss_pred hcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEE
Q 018198 160 EENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLH 239 (359)
Q Consensus 160 ~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~ 239 (359)
..+...|-+|....- +. ..-.|-|+.- +|-+=|-+||-+++. +.. +++.+ .....|-..|++=
T Consensus 16 ~~l~dGvYRI~~~gl----~G---~~Q~GVGv~~--~GVFHTmWHVTrGa~---l~~-~g~~l--~P~wa~V~~Dlis-- 78 (185)
T 2fom_B 16 AELEDGAYRIKQKGI----LG---YSQIGAGVYK--EGTFHTMWHVTRGAV---LMH-KGKRI--EPSWADVKKDLIS-- 78 (185)
T ss_dssp --CCSEEEEEEEEET----TE---EEEEEEEEEE--TTEEEEEHHHHTTCC---EEE-TTEEE--CEEEEETTTTEEE--
T ss_pred ccCCCcEEEEEeccc----cc---cceeeeEEee--CCEEEeeeeecCcce---EEE-CCcEe--cceeehheeceee--
Confidence 347788888876432 21 2235666655 588999999988863 222 23332 1223355667642
Q ss_pred EcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCcee---EeEEeeeecccCCcccccEEEEcccCCCCCccceeecC
Q 018198 240 IDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTCT---TGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDS 316 (359)
Q Consensus 240 v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~~---~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~ 316 (359)
.- -+-+|. ..-.-+++|.++-.+.+...... .|...-. .+ +.-.+..+..+|.||+|++|.
T Consensus 79 YG------G~WkL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~----~G----eigaI~lD~p~GTSGSPIin~ 142 (185)
T 2fom_B 79 YG------GGWKLE--GEWKEGEEVQVLALEPGKNPRAVQTKPGLFKTN----TG----TIGAVSLDFSPGTSGSPIVDK 142 (185)
T ss_dssp ES------SSCCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEECS----SC----EEEEECCCSCGGGTTCEEECT
T ss_pred cC------CcccCc--cccCCCceEEEEEECCCCceEEEEcCCceeecC----CC----eEEEEECCCCCCCCCCceEcc
Confidence 11 122342 12233567777777666443222 2222111 11 122334455679999999999
Q ss_pred CCeEEEEEeee
Q 018198 317 SGSLIGVNTFI 327 (359)
Q Consensus 317 ~G~viGi~~~~ 327 (359)
+|+|||+--.+
T Consensus 143 ~G~vvGLYGNG 153 (185)
T 2fom_B 143 KGKVVGLYGNG 153 (185)
T ss_dssp TSCEEEETTCE
T ss_pred CCcEEEEecce
Confidence 99999986555
No 176
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=93.83 E-value=0.11 Score=42.94 Aligned_cols=136 Identities=18% Similarity=0.230 Sum_probs=77.6
Q ss_pred hcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEE
Q 018198 160 EENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLH 239 (359)
Q Consensus 160 ~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~ 239 (359)
..+...|-+|....- ++ ..-.|-|+.- +|-+=|-+||-+++. +.. +++.+ .....|-..|++=
T Consensus 20 ~~l~dGVYRI~~~gl----~G---~~Q~GVGv~k--~GVFHTMWHVTrGa~---l~~-~g~~l--~P~WasV~~Dlis-- 82 (198)
T 3e90_B 20 GDTTTGVYRIMTRGL----LG---SYQAGAGVMV--EGVFHTLWHTTKGAA---LMS-GEGRL--DPYWGSVKEDRLC-- 82 (198)
T ss_dssp CCCCSEEEEEEEEET----TE---EEEEEEEEEE--TTEEEECHHHHTTCC---EEE-TTEEE--CEEEEETTTTEEE--
T ss_pred ccCCCceEEEEeccc----cc---cceeeeEEee--CCEEEeeeeecCcce---EEE-CCcEe--cceeehheeceee--
Confidence 357788889987542 21 2235666654 588999999988863 222 23332 2233455667641
Q ss_pred EcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCce---eEeEEeeeecccCCcccccEEEEcccCCCCCccceeecC
Q 018198 240 IDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTC---TTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDS 316 (359)
Q Consensus 240 v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~---~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~ 316 (359)
.-. +-+|. ..-.-.+.|.++-++.+..... ..|...-. +. +.-.+..+..+|.||+|++|.
T Consensus 83 YGG------~WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~-----~g---~iGaV~lD~p~GTSGSPIin~ 146 (198)
T 3e90_B 83 YGG------PWKLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTP-----EG---EIGAVTLDFPTGTSGSPIVDK 146 (198)
T ss_dssp ESS------SCCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET-----TE---EEEEECCCCCTTCTTCEEECT
T ss_pred cCC------cccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC-----CC---eEEEEECCCCCCCCCCceecC
Confidence 111 22442 2222237788888877655432 23433211 11 122334455679999999999
Q ss_pred CCeEEEEEeeec
Q 018198 317 SGSLIGVNTFIT 328 (359)
Q Consensus 317 ~G~viGi~~~~~ 328 (359)
+|+|||+--.+.
T Consensus 147 ~G~VVGLYGNGv 158 (198)
T 3e90_B 147 NGDVIGLYGNGV 158 (198)
T ss_dssp TCCEEEECCCEE
T ss_pred CCcEEEEecceE
Confidence 999999855443
No 177
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=93.70 E-value=0.17 Score=41.61 Aligned_cols=136 Identities=21% Similarity=0.248 Sum_probs=77.1
Q ss_pred hcCCCeeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEE
Q 018198 160 EENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLH 239 (359)
Q Consensus 160 ~~~~~svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~ 239 (359)
..+..-|-+|....- +. ..-.|-|+.- +|-+=|.+||-+++. +.. +++.+ .....|-..|++=
T Consensus 25 ~~~~dGVYRI~~~gl----~G---~~Q~GVGv~k--~GVFHTMWHVTrGa~---l~~-~g~~l--~P~wasV~~Dlis-- 87 (191)
T 3u1j_B 25 AELEEGVYRIKQQGI----FG---KTQVGVGVQK--EGVFHTMWHVTRGAV---LTH-NGKRL--EPNWASVKKDLIS-- 87 (191)
T ss_dssp CCCCSEEEEEEEEET----TE---EEEEEEEEEE--TTEEEEEHHHHTTCC---EEE-TTEEE--CEEEEETTTTEEE--
T ss_pred ccCCCceEEEEeccc----cc---cceeeeEEee--CCEEEeeeeecCcce---EEE-CCcEe--cceeecceeceee--
Confidence 457788889987542 21 2235666654 588999999988763 222 23332 2223455667641
Q ss_pred EcCCCCCccceEecCCCCCCCCCEEEEEecCCCCCCce---eEeEEeeeecccCCcccccEEEEcccCCCCCccceeecC
Q 018198 240 IDAPNHELRPIHVSVSADLRVGKKIYAIGHPLGWSFTC---TTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDS 316 (359)
Q Consensus 240 v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~---~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~ 316 (359)
.-. +-+|. ..=.-.+.|.++-++.+..... ..|...- ... +.-.+..+..+|.||+|++|.
T Consensus 88 YGG------~WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~-----~~g---~iGaV~lD~p~GTSGSPIin~ 151 (191)
T 3u1j_B 88 YGG------GWRLS--AQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQT-----TTG---EIGAIALDFKPGTSGSPIINR 151 (191)
T ss_dssp ESS------SCCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEC-----SSC---EEEEECCCCCTTCTTCEEECT
T ss_pred cCC------cccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEc-----CCC---eEEEEECCCCCCCCCCceecC
Confidence 111 22342 1112246788888877655432 2333321 111 122334455679999999999
Q ss_pred CCeEEEEEeeec
Q 018198 317 SGSLIGVNTFIT 328 (359)
Q Consensus 317 ~G~viGi~~~~~ 328 (359)
+|+|||+--.+.
T Consensus 152 ~G~VVGLYGNG~ 163 (191)
T 3u1j_B 152 EGKVVGLYGNGV 163 (191)
T ss_dssp TSCEEEECCBEE
T ss_pred CCcEEEEecCeE
Confidence 999999855543
No 178
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=93.34 E-value=0.22 Score=36.18 Aligned_cols=66 Identities=18% Similarity=0.294 Sum_probs=52.5
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECC-hhHHHHHHHHHhhhhce
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGT-DRELQQVVKQLQKLVNV 111 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~-~~~~~~i~~~L~k~~~v 111 (359)
..+.....+..|.++.+...+..+|.|++++...... +...+.+.++.. ....++|.+.|+++.+.
T Consensus 6 ~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~-~~~~~~i~v~~~~~~~l~~l~~~L~~~~~~ 72 (91)
T 1zpv_A 6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD-EYFTMMAVVSSDEKQDFTYLRNEFEAFGQT 72 (91)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEEEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc-CEEEEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4677889999999999999999999999999994333 555666666533 46789999999987654
No 179
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=93.15 E-value=0.16 Score=43.23 Aligned_cols=131 Identities=18% Similarity=0.238 Sum_probs=72.7
Q ss_pred eeEEEEeeeeecCCcccccccceEEEEEEeCCCEEEecccccCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCC
Q 018198 165 SVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPN 244 (359)
Q Consensus 165 svV~I~~~~~~~~~~~~~~~~~~GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~ 244 (359)
.|-+|.... .++ ..-.|-|+.- +|.+=|-+||-.++. +.. +++.+ .....|-..|++= .-.
T Consensus 71 GvYRI~~~g----l~G---~~Q~GVGv~~--~GVFHTmWHVTrGa~---l~~-~g~~~--~P~wa~V~~Dlis--YGG-- 131 (236)
T 3lkw_A 71 GIYRILQRG----LLG---RSQVGVGVFQ--EGVFHTMWHVTRGAV---LMY-QGKRL--EPSWASVKKDLIS--YGG-- 131 (236)
T ss_dssp EEEEEEEEE----TTE---EEEEEEEEEE--TTEEEECHHHHTTCC---EEE-TTEEE--CEEEEETTTTEEE--ESS--
T ss_pred cEEEEEecc----ccc---cceeeeEEee--CCEEEEeeeecCcce---EEE-CCcEe--cceeehheeceee--cCC--
Confidence 777777643 121 2235666654 588999999988863 222 23332 1223355667541 111
Q ss_pred CCccceEecCCCCCCCCCEEEEEecCCCCCCce---eEeEEeeeecccCCcccccEEEEcccCCCCCccceeecCCCeEE
Q 018198 245 HELRPIHVSVSADLRVGKKIYAIGHPLGWSFTC---TTGVISALDREIPGRLIQGVIQIDASVNLGNSGGPLLDSSGSLI 321 (359)
Q Consensus 245 ~~~~~~~l~~~~~~~~G~~v~~iG~p~~~~~~~---~~G~vs~~~~~~~~~~~~~~i~~~~~~~~G~SGgPl~~~~G~vi 321 (359)
+-+|. ..=.-.+.|.++-++.+..... ..|...-. +. +.-.+..+..+|.||+|++|.+|+||
T Consensus 132 ----~WkL~--~~W~g~~eVqv~A~~Pg~~~~~~qt~PG~~~~~-----~g---~igav~lD~p~GTSGSPIin~~G~Vv 197 (236)
T 3lkw_A 132 ----GWRFQ--GSWNAGEEVQVIAVEPGKNPKNVQTAPGTFKTP-----EG---EVGAIALDFKPGTAGSPIVNREGKIV 197 (236)
T ss_dssp ----SCCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEET-----TE---EEEEECCCCCTTCTTCEEECTTSCEE
T ss_pred ----CccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC-----CC---eEEEEECCCCCCCCCCceecCCCcEE
Confidence 22342 1212346788888877655432 23433211 11 12233444567999999999999999
Q ss_pred EEEeeec
Q 018198 322 GVNTFIT 328 (359)
Q Consensus 322 Gi~~~~~ 328 (359)
|+--.+.
T Consensus 198 GLYGnG~ 204 (236)
T 3lkw_A 198 GLYGNGV 204 (236)
T ss_dssp EESCCEE
T ss_pred EEecceE
Confidence 9855443
No 180
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=92.93 E-value=0.0071 Score=56.80 Aligned_cols=63 Identities=19% Similarity=0.005 Sum_probs=47.0
Q ss_pred ccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeee
Q 018198 8 PLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESL 75 (359)
Q Consensus 8 p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~l 75 (359)
|+++|+|+++.|++|+++| ..+|.++++.+.+ + .+.......+..++++.++....+++.+..
T Consensus 194 ~~~~~~di~~~S~sK~l~g---~~~G~~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~a~~~al~~~~~ 256 (374)
T 2aeu_A 194 ALKLGADLVVTSTDKLMEG---PRGGLLAGKKELV-D-KIYIEGTKFGLEAQPPLLAGIYRALKNFNL 256 (374)
T ss_dssp HHHHTCSEEEEETTSSSSS---CSCEEEEEEHHHH-H-HHHHHHHTTTCBCCHHHHHHHHHHHHHCCH
T ss_pred ccccCCcEEEecCcccccC---cceEEEEECHHHH-H-HHHHhhccccCCCCHHHHHHHHHHHHHHhH
Confidence 6788999999999999988 3567777765433 2 233334556778899999999999887654
No 181
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=92.69 E-value=0.11 Score=40.26 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=26.0
Q ss_pred EEcccCCCCCccceeecCCCeEEEEEeeecC
Q 018198 299 QIDASVNLGNSGGPLLDSSGSLIGVNTFITS 329 (359)
Q Consensus 299 ~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~ 329 (359)
.-.....+|+||-|++|..|+||+|+-.+.+
T Consensus 98 ip~G~g~~GdSGrpI~Dn~GrVVaIVlGGa~ 128 (157)
T 1ep5_B 98 VPKGVGAKGDSGRPILDNQGRVVAIVLGGVN 128 (157)
T ss_dssp EETTCCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred eccCCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 3345667899999999999999999988763
No 182
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=92.51 E-value=0.27 Score=37.56 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=26.0
Q ss_pred EEcccCCCCCccceeecCCCeEEEEEeeecC
Q 018198 299 QIDASVNLGNSGGPLLDSSGSLIGVNTFITS 329 (359)
Q Consensus 299 ~~~~~~~~G~SGgPl~~~~G~viGi~~~~~~ 329 (359)
.-.....+|+||-|++|..|+||+|+-.+..
T Consensus 91 vp~G~g~~GdSGrpI~Dn~GrVVaIVlGG~~ 121 (149)
T 1vcp_A 91 IPTGAGKPGDSGRPIFDNKGRVVAIVLGGAN 121 (149)
T ss_dssp EETTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred ecccCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 3345567899999999999999999988764
No 183
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=92.25 E-value=0.17 Score=39.18 Aligned_cols=29 Identities=28% Similarity=0.446 Sum_probs=25.1
Q ss_pred cccCCCCCccceeecCCCeEEEEEeeecC
Q 018198 301 DASVNLGNSGGPLLDSSGSLIGVNTFITS 329 (359)
Q Consensus 301 ~~~~~~G~SGgPl~~~~G~viGi~~~~~~ 329 (359)
.....+|+||-|++|..|+||+|+-.+..
T Consensus 101 ~g~g~~GdSGrPi~Dn~GrVVaIVlGG~n 129 (158)
T 4agk_A 101 TGAGGPGDSGRPILDNSGKVVAIVLGGAN 129 (158)
T ss_dssp TTSSCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred cccCCCCCCCCccccCCCCEEEEEecCCC
Confidence 44567899999999999999999988764
No 184
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=91.83 E-value=0.3 Score=41.38 Aligned_cols=29 Identities=24% Similarity=0.432 Sum_probs=25.2
Q ss_pred cccCCCCCccceeecCCCeEEEEEeeecC
Q 018198 301 DASVNLGNSGGPLLDSSGSLIGVNTFITS 329 (359)
Q Consensus 301 ~~~~~~G~SGgPl~~~~G~viGi~~~~~~ 329 (359)
.....+||||-|+||..|+||+|+-.+.+
T Consensus 197 ~G~G~~GDSGRpI~DN~GrVVaIVLGGan 225 (253)
T 2yew_A 197 TGSGKPGDSGRPIFDNTGKVVAIVLGGAN 225 (253)
T ss_dssp TTSCCSSCTTCEEECSSCBEEEEEEEEEE
T ss_pred cCCCCCCCCCCccccCCCcEEEEEecCCC
Confidence 44567899999999999999999998764
No 185
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=91.76 E-value=0.37 Score=37.45 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=25.4
Q ss_pred EcccCCCCCccceeecCCCeEEEEEeeecC
Q 018198 300 IDASVNLGNSGGPLLDSSGSLIGVNTFITS 329 (359)
Q Consensus 300 ~~~~~~~G~SGgPl~~~~G~viGi~~~~~~ 329 (359)
-.....+|+||-|++|..|+||+|+-.+..
T Consensus 101 p~GvG~~GDSGRpI~DN~GrVVaivlgg~~ 130 (161)
T 1svp_A 101 PRGVGGRGDAGRPIMDNSGRVVAIVLGGAD 130 (161)
T ss_dssp ETTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred cccCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 344567899999999999999999988764
No 186
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=91.08 E-value=0.5 Score=39.68 Aligned_cols=64 Identities=20% Similarity=0.260 Sum_probs=51.6
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLV 109 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~ 109 (359)
..+.....+..|.++.+.++|..+|+|++.++... ..+.-.|++.+..+....++|.+.|+++.
T Consensus 7 ~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~-~~~~f~~~~~v~~~~~~~~~l~~~L~~~~ 70 (192)
T 1u8s_A 7 LVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM-FGKEFTLLMLISGSPSNITRVETTLPLLG 70 (192)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETTEEEEEEEEEECHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee-cCCceEEEEEEecCCCCHHHHHHHHHHHH
Confidence 35778899999999999999999999999999944 44555567777766667888888888654
No 187
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=90.43 E-value=0.39 Score=41.04 Aligned_cols=29 Identities=24% Similarity=0.398 Sum_probs=25.1
Q ss_pred cccCCCCCccceeecCCCeEEEEEeeecC
Q 018198 301 DASVNLGNSGGPLLDSSGSLIGVNTFITS 329 (359)
Q Consensus 301 ~~~~~~G~SGgPl~~~~G~viGi~~~~~~ 329 (359)
.....+||||-|++|..|+||+|+-.+.+
T Consensus 207 ~G~G~~GDSGRpI~DN~GrVVaIVLGGan 235 (264)
T 1kxf_A 207 RGVGGRGDSGRPIMDNSGRVVAIVLGGAD 235 (264)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred ccCCCCCCCCCccccCCCcEEEEEecCCC
Confidence 44567899999999999999999988763
No 188
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=89.00 E-value=0.12 Score=50.51 Aligned_cols=87 Identities=6% Similarity=-0.104 Sum_probs=48.9
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCcc------------chhhhhhhhc--cceeeeeE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGIL------------SRIDGVFTRR--NCNIESLG 76 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~l------------sp~~a~l~~R--G~~tl~lr 76 (359)
.|+|++..|.+||+.++.++ |.+..+++.+....+.....-+|+.. .....|..++ |.+.+.-+
T Consensus 266 ~~~D~v~~s~hK~l~~p~g~--G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~ 343 (502)
T 3hbx_A 266 PLVKSINVSGHKYGLVYAGI--GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNV 343 (502)
T ss_dssp TTEEEEEEETTTTTCCCSSC--EEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECcccccCCCCCe--EEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999999999999998886 44444433221101111111122211 2344455544 33333334
Q ss_pred eecccCCceEEEEEEECChhHHHHHHHHHhhhhceee
Q 018198 77 VIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLK 113 (359)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~ 113 (359)
+ ++. .+.++.+.++|++++.+.-
T Consensus 344 ~-----~~~---------~~~a~~l~~~L~~~~~~~~ 366 (502)
T 3hbx_A 344 M-----ENC---------RENMIVLREGLEKTERFNI 366 (502)
T ss_dssp H-----HHH---------HHHHHHHHHHHHTTTCEEE
T ss_pred H-----HHH---------HHHHHHHHHHHHhCCCEEE
Confidence 4 555 6788889999998876543
No 189
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=88.98 E-value=1 Score=38.58 Aligned_cols=72 Identities=11% Similarity=0.344 Sum_probs=54.6
Q ss_pred EEEEeecCCCCccchhhhhhhhccceeeeeEeeccc----CCceEEEEEEECChhHHHHHHHHHhhhhceeeeeeccC
Q 018198 46 TISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN----KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQS 119 (359)
Q Consensus 46 ~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~----~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~~ 119 (359)
.+....++..|.|+.+...+..-+.|++++...... .+...|++.+... ..+++.+.|+++++|.+|....+
T Consensus 6 tL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~--~Le~LL~kLrkI~gV~~V~Rv~~ 81 (223)
T 1y7p_A 6 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG--DFEKILERVKTFDYIIEIEEEES 81 (223)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS--CHHHHHHHHHTCTTEEEEEEECC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCC--CHHHHHHHHhCCCCeeEEEEEcc
Confidence 567788999999999999999999999999994433 2345566444443 99999999999999999998643
No 190
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=88.71 E-value=0.57 Score=38.47 Aligned_cols=43 Identities=23% Similarity=0.416 Sum_probs=30.4
Q ss_pred cCCCCCccceeecCCCeEEEEEeeec-CCCcceeEEEEehHHHH
Q 018198 303 SVNLGNSGGPLLDSSGSLIGVNTFIT-SGAFSGIGFALPIDTVR 345 (359)
Q Consensus 303 ~~~~G~SGgPl~~~~G~viGi~~~~~-~~~~~~~~~aip~~~i~ 345 (359)
....|.||||++-.+|.+|||..+.. ..+...--.++|.+.+.
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai~fvPve~l~ 197 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAVDFIPVESLE 197 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEEEHHHHH
T ss_pred eeccCCCCCceecCCCCEEEEEEEEEEcCceeeeEEEEEccccc
Confidence 34569999999988999999986654 22323334457987654
No 191
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=86.96 E-value=0.11 Score=48.04 Aligned_cols=84 Identities=11% Similarity=0.046 Sum_probs=50.2
Q ss_pred ccccCC--cEEEeee--cccccCCcceeeeeeeeccccceeeEEEEeec------------CCCCccchhhhhhhhccce
Q 018198 8 PLEFGA--GIVMHSA--SKFIARHSDVMACGIAVNSERVQRHTISVFVG------------DESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 8 p~~~g~--d~~~~s~--tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~------------~~G~~lsp~~a~l~~RG~~ 71 (359)
...+|. |+++.|+ +|+++++++ +|.++++++.+.+ .+..+.. .....+++..+.+.+..++
T Consensus 167 ~~~~~~~~di~~~Sf~~~K~l~~~g~--gg~~~~~~~~l~~-~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~ 243 (367)
T 3nyt_A 167 GKRSCNLSTVACTSFFPSAPLGCYGD--GGAIFTNDDELAT-AIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLE 243 (367)
T ss_dssp TEETTSSSSEEEEECCTTSSSCCSSC--CEEEEESCHHHHH-HHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHH
T ss_pred CeeccCCCCEEEEECCCCCcCCCcCc--eeEEEeCCHHHHH-HHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHH
Confidence 334455 9999995 999999888 7888886655432 1111100 1245577888877776665
Q ss_pred eeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhh
Q 018198 72 IESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKL 108 (359)
Q Consensus 72 tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~ 108 (359)
.+.-.. ++. .+..+.+.+.|+++
T Consensus 244 ~~~~~~-----~~~---------~~~~~~~~~~L~~~ 266 (367)
T 3nyt_A 244 IFEEEI-----ALR---------QKVAAEYDLSLKQV 266 (367)
T ss_dssp THHHHH-----HHH---------HHHHHHHHHHHHHT
T ss_pred HHHHHH-----HHH---------HHHHHHHHHHhccC
Confidence 432222 333 45556666666665
No 192
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.27 E-value=2.3 Score=40.18 Aligned_cols=71 Identities=7% Similarity=0.221 Sum_probs=59.1
Q ss_pred EEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 46 TISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 46 ~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
++....+|.+|+++.+...|...|+|+....+.. ..+...|.+-++.....-+.+.++|++++.+.++.++
T Consensus 333 rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~~~~~~~~~l~~l~~i~~v~~vr~l 403 (404)
T 1sc6_A 333 RLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLL 403 (404)
T ss_dssp EEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEECCHHHHHHHHHHHHTSTTEEEEEEC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCCCCCCCHHHHHHHhcCCCeeEEEEe
Confidence 5678889999999999999999999999999943 4455677777777644667999999999999988753
No 193
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=85.84 E-value=2.5 Score=33.39 Aligned_cols=59 Identities=17% Similarity=0.266 Sum_probs=43.8
Q ss_pred eeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccC-CceEEEEEEECChhHHHHHHHH
Q 018198 43 QRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNK-DRALFTMVVFGTDRELQQVVKQ 104 (359)
Q Consensus 43 ~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~-~~~~~~~~~~~~~~~~~~i~~~ 104 (359)
+.+++...+.|.+|.++.+...|..+|+|+..+......+ ...|++ ..+.+.+.++.++
T Consensus 5 ~~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~---~~d~~~a~~~L~~ 64 (144)
T 2f06_A 5 VAKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGI---VSDPDKAYKALKD 64 (144)
T ss_dssp EEEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEE---ESCHHHHHHHHHH
T ss_pred EEEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEE---eCCHHHHHHHHHH
Confidence 4568888999999999999999999999999998854332 224554 3566666665544
No 194
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=80.33 E-value=5.1 Score=37.92 Aligned_cols=71 Identities=15% Similarity=0.265 Sum_probs=57.1
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeee
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVST 116 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~ 116 (359)
+++...++|.+|+++.++..|...|+|+...-. .+..+.....+-++.-.+..+.+.++|++++.+.++..
T Consensus 344 ~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~-~~~~~~~y~~~d~~~~~~~~~~~~~~l~~~~~~~~~r~ 414 (416)
T 3k5p_A 344 TRFMHVHENRPGILNSLMNVFSHHHINIASQFL-QTDGEVGYLVMEADGVGEASDAVLQEIREIPGTIRARL 414 (416)
T ss_dssp EEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEE-EECSSCEEEEEEECCCHHHHHHHHHHHHTSTTEEEEEE
T ss_pred eEEEEEecCCccHHHHHHHHHHHcCCCHHHHhc-cCCCceEEEEEEecCCCCCcHHHHHHHHhCCCEEEEEE
Confidence 467889999999999999999999999999887 44445555555554225567899999999999998875
No 195
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=77.61 E-value=0.58 Score=42.98 Aligned_cols=28 Identities=25% Similarity=0.154 Sum_probs=22.6
Q ss_pred CcEEEeeec--ccccCCcceeeeeeeeccccc
Q 018198 13 AGIVMHSAS--KFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 13 ~d~~~~s~t--K~~~gh~d~~~g~~~~~~~~~ 42 (359)
+|+++.|++ |+++|++. +|.++++++.+
T Consensus 176 ~d~~~~s~~~~K~l~~~g~--~g~~~~~~~~~ 205 (374)
T 3uwc_A 176 GQFACFSLHPLKNLNVWSD--AGVIITHSDEY 205 (374)
T ss_dssp SSEEEEECSSSSSSCCSSC--CEEEEESCHHH
T ss_pred ccEEEEeCCCCCcCCccce--eEEEEeCCHHH
Confidence 899999955 99999887 77877766544
No 196
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=76.64 E-value=0.4 Score=44.79 Aligned_cols=81 Identities=9% Similarity=0.049 Sum_probs=46.0
Q ss_pred CcEEEeee--cccccCCcceeeeeeeeccccceeeEEEEeecC----------CC--CccchhhhhhhhccceeeeeEee
Q 018198 13 AGIVMHSA--SKFIARHSDVMACGIAVNSERVQRHTISVFVGD----------ES--GILSRIDGVFTRRNCNIESLGVI 78 (359)
Q Consensus 13 ~d~~~~s~--tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~----------~G--~~lsp~~a~l~~RG~~tl~lr~~ 78 (359)
+|+++.|+ +|++++++ .+|.++++++.+.+ .+..+... .| ..+++..++.....++.+.-..
T Consensus 202 ~di~~~S~~~sK~~~~~G--~~g~~~~~~~~~~~-~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~- 277 (399)
T 2oga_A 202 SSVAAFSFYPGKNLGCFG--DGGAVVTGDPELAE-RLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWN- 277 (399)
T ss_dssp TCEEEEECCTTSSSCCSS--CCEEEEESCHHHHH-HHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHH-
T ss_pred cCEEEEeCCCCccCCcCC--ceEEEEeCCHHHHH-HHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHH-
Confidence 79999999 89999988 46777776444322 11111110 11 2567888877766665432112
Q ss_pred cccCCceEEEEEEECChhHHHHHHHHHhhhhc
Q 018198 79 GLNKDRALFTMVVFGTDRELQQVVKQLQKLVN 110 (359)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~ 110 (359)
++. .+..+.+.+.|++++.
T Consensus 278 ----~~~---------~~~~~~l~~~L~~~~g 296 (399)
T 2oga_A 278 ----GRR---------SALAAEYLSGLAGLPG 296 (399)
T ss_dssp ----HHH---------HHHHHHHHHHTTTCTT
T ss_pred ----HHH---------HHHHHHHHHHhccCCC
Confidence 223 4455556666665544
No 197
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=72.96 E-value=0.41 Score=43.73 Aligned_cols=31 Identities=19% Similarity=-0.120 Sum_probs=22.3
Q ss_pred ccccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 8 PLEFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 8 p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++..++|+++.|++|+++|. ++|.++.+.+.
T Consensus 194 ~~~~~~d~~~~s~sK~~~~~---~gg~~~~~~~l 224 (359)
T 3pj0_A 194 EICALFDSVYVSFYKGIGGI---AGAILAGNDDF 224 (359)
T ss_dssp HHHTTCSEEEEESSSTTCCS---SCEEEEECHHH
T ss_pred HhhccCCEEEEeccccCCCc---ceEEEECCHHH
Confidence 34468999999999999887 44555555433
No 198
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=69.67 E-value=0.68 Score=42.43 Aligned_cols=80 Identities=9% Similarity=0.059 Sum_probs=43.5
Q ss_pred cEEEeeec--ccccCCcceeeeeeeeccccceeeEEEEeec--------------CCC--Cccchhhhhhhhccceeeee
Q 018198 14 GIVMHSAS--KFIARHSDVMACGIAVNSERVQRHTISVFVG--------------DES--GILSRIDGVFTRRNCNIESL 75 (359)
Q Consensus 14 d~~~~s~t--K~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~--------------~~G--~~lsp~~a~l~~RG~~tl~l 75 (359)
|+++.|++ |++++ + +||+++.+++.+.+ .+..+.. ..+ ..+++..+.+....++.+.-
T Consensus 173 ~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 248 (375)
T 2fnu_A 173 LASVFSFHAIKPITT-A--EGGAVVTNDSELHE-KMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPF 248 (375)
T ss_dssp SEEEEECCTTSSSCC-S--SCEEEEESCHHHHH-HHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHH
T ss_pred CeEEEeCCCCCCccc-c--CceEEEeCCHHHHH-HHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHH
Confidence 89999999 99976 5 66666655443321 1111110 011 14566666655544333322
Q ss_pred EeecccCCceEEEEEEECChhHHHHHHHHHhhhhce
Q 018198 76 GVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 76 r~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v 111 (359)
++ ++. .+..+.+.+.|++++.+
T Consensus 249 ~~-----~~~---------~~~~~~l~~~L~~~~~~ 270 (375)
T 2fnu_A 249 LM-----QKR---------EEAALTYDRIFKDNPYF 270 (375)
T ss_dssp HH-----HHH---------HHHHHHHHHHHTTCSSE
T ss_pred HH-----HHH---------HHHHHHHHHHhhcCCCc
Confidence 22 334 56677777777776543
No 199
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=69.29 E-value=9.5 Score=37.27 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=55.9
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCC-ceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKD-RALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~-~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
+.+.....+.+|+++.+...|...|+|+-.+++...+++ ..-|.+.++. +.-+.+.++|+++++|.++.++
T Consensus 455 ~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~--~~~~~~l~~l~~~~~i~~v~~v 526 (529)
T 1ygy_A 455 INLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ--DVPDDVRTAIAAAVDAYKLEVV 526 (529)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS--CCCHHHHHHHHHHHTEEEEEEE
T ss_pred cEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC--CCCHHHHHHHhcCCCccEEEEE
Confidence 466777889999999999999999999999999655433 3445555554 3456788889999999888865
No 200
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=68.31 E-value=0.39 Score=43.63 Aligned_cols=82 Identities=9% Similarity=-0.050 Sum_probs=45.2
Q ss_pred ccccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCcc--chhhhhhhhccceeeeeEeecccCCce
Q 018198 8 PLEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGIL--SRIDGVFTRRNCNIESLGVIGLNKDRA 85 (359)
Q Consensus 8 p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~l--sp~~a~l~~RG~~tl~lr~~~~~~~~~ 85 (359)
++..++|.++.|++|++++- +||.++.+.+.+ + .+..+....|+.+ +...++....+++...-++ ...
T Consensus 189 ~~~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~ 258 (347)
T 1jg8_A 189 EYAGYADSVMFCLSKGLCAP---VGSVVVGDRDFI-E-RARKARKMLGGGMRQAGVLAAAGIIALTKMVDRL-----KED 258 (347)
T ss_dssp HHHHTCSEEEEESSSTTCCS---SCEEEEECHHHH-H-HHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTH-----HHH
T ss_pred HhcccccEEEEecccccCCC---ceEEEEcCHHHH-H-HHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHH-----HHH
Confidence 34458999999999999863 555555444332 2 1212222334333 4455565555655422122 222
Q ss_pred EEEEEEECChhHHHHHHHHHhhh
Q 018198 86 LFTMVVFGTDRELQQVVKQLQKL 108 (359)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~L~k~ 108 (359)
.+..+.+.++|+++
T Consensus 259 ---------~~~~~~l~~~L~~~ 272 (347)
T 1jg8_A 259 ---------HENARFLALKLKEI 272 (347)
T ss_dssp ---------HHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHhc
Confidence 34667788888876
No 201
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=68.05 E-value=1.5 Score=42.22 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=24.9
Q ss_pred ccccccCCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 6 LRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 6 ~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
+.+...|+|+++.|.+||+.|...+ |.++.+++.+
T Consensus 264 ~~~~~~g~d~~~~s~~K~l~~~~~~--g~~~~~~~~~ 298 (497)
T 3mc6_A 264 LDFRVPGVTSISCDTHKYGFAPKGS--SVIMYRNSDL 298 (497)
T ss_dssp CSTTSTTCCEEEEETTTTTCCCSSC--EEEECSSHHH
T ss_pred ccccCCCCcEEEECchhhcCCCCCc--eeEEecCHHH
Confidence 3455679999999999998666553 5666655443
No 202
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=68.04 E-value=0.94 Score=41.66 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=24.2
Q ss_pred ccC--CcEEEeeec--ccccCCcceeeeeeeeccccc
Q 018198 10 EFG--AGIVMHSAS--KFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 10 ~~g--~d~~~~s~t--K~~~gh~d~~~g~~~~~~~~~ 42 (359)
.+| +|+++.|++ |+++|++. +|.++++++.+
T Consensus 170 ~~~~~~d~~~~S~~~~K~l~~~g~--gg~~~~~~~~~ 204 (373)
T 3frk_A 170 KVGSLGDAAGFSFYPAKNLGSLGD--GGAVVTNDKDL 204 (373)
T ss_dssp ETTSSSSEEEEECCTTSSSCCSSS--CEEEEESCHHH
T ss_pred eccccccEEEEeCcCCCccCccce--eEEEEeCCHHH
Confidence 445 899999955 99999887 78888776544
No 203
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=67.35 E-value=1.4 Score=40.17 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=24.4
Q ss_pred ccccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 8 PLEFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 8 p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
..++|+|+++.|++|+++|.. -.|.++++++.
T Consensus 195 ~~~~~~di~~~s~sK~~~~~~--~~G~~~~~~~~ 226 (371)
T 2e7j_A 195 LKEIGADFIVGSGHKSMAASG--PIGVMGMKEEW 226 (371)
T ss_dssp HHHHTCSEEEEEHHHHSSCCS--SCEEEEECTTT
T ss_pred hhhcCCCEEEecCCcCCCCCC--CcEEEEEechh
Confidence 345689999999999988875 44677776654
No 204
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=67.14 E-value=9.5 Score=31.69 Aligned_cols=42 Identities=26% Similarity=0.581 Sum_probs=31.1
Q ss_pred CCCCccceeecCCCeEEEEEeeec--CCCcceeEEEEehHHHHHH
Q 018198 305 NLGNSGGPLLDSSGSLIGVNTFIT--SGAFSGIGFALPIDTVRGI 347 (359)
Q Consensus 305 ~~G~SGgPl~~~~G~viGi~~~~~--~~~~~~~~~aip~~~i~~~ 347 (359)
..|.||+||+-+.|++|||-.... ++....+.| +|...+..-
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~~ 189 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLETT 189 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eeccccccc
Confidence 458899999988999999866644 444455666 898776543
No 205
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=66.78 E-value=4.2 Score=39.38 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=26.1
Q ss_pred ccccccccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 4 VVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 4 ~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
....|++ ++|+++.|++|.+.|+. ||.++++++
T Consensus 249 ~~~~~~~-~aDiv~~S~hK~l~Gp~---GG~i~~~~~ 281 (490)
T 2a7v_A 249 VIPSPFK-HADIVTTTTHKTLRGAR---SGLIFYRKG 281 (490)
T ss_dssp SSCCGGG-TCSEEEEESSGGGCSCS---CEEEEEECS
T ss_pred cCCCCCC-CCCEEEECCcccCcccc---chheeeccc
Confidence 3456776 89999999999998873 678887764
No 206
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=65.76 E-value=2.7 Score=39.12 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=24.1
Q ss_pred cccccCCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 7 RPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 7 ~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
...++|+|+++.|++|++++.+ .|.++.+++..
T Consensus 210 ~~~~~~~di~~~s~sK~~g~~g---~G~~~~~~~~~ 242 (423)
T 3lvm_A 210 DLSQLKVDLMSFSGHKIYGPKG---IGALYVRRKPR 242 (423)
T ss_dssp CTTTSCCSEEEEESTTTTSCSS---CEEEEECBTTB
T ss_pred ChhhcCCCEEEechHHhcCCCC---eEEEEEecccc
Confidence 3446799999999999888777 45666655443
No 207
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=64.35 E-value=2.8 Score=39.76 Aligned_cols=27 Identities=15% Similarity=-0.010 Sum_probs=21.7
Q ss_pred CCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 12 GAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 12 g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
|+|+++.|.+||+.++.+ +|.+..+++
T Consensus 252 ~~d~~~~~~hK~~~~~~~--~G~~~~~~~ 278 (452)
T 2dgk_A 252 RVKSISASGHKFGLAPLG--CGWVIWRDE 278 (452)
T ss_dssp TEEEEEEETTTTTCCCSS--CEEEEESSG
T ss_pred CCcEEEECcccccCCCCC--eEEEEEcCH
Confidence 899999999999987776 366766554
No 208
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=64.06 E-value=0.88 Score=41.79 Aligned_cols=88 Identities=14% Similarity=0.047 Sum_probs=50.1
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMV 90 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~ 90 (359)
++.++++.|++|.++..+- -.|.++++. .+.+ .+.......+...++...+.....++...-.+ ....+..
T Consensus 211 ~~~~i~~~s~sK~~~~~G~-r~G~v~~~~-~l~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~----- 281 (375)
T 3op7_A 211 YDKGIAVNSLSKTYSLPGI-RIGWVAANH-QVTD-ILRDYRDYTMICAGVFDDLVAQLALAHYQEIL-ERNRHIL----- 281 (375)
T ss_dssp CTTEEEEEESSSSSSCGGG-CCEEEECCH-HHHH-HHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHH-HHHHHHH-----
T ss_pred cCCEEEEeEChhhcCCccc-ceEEEEeCH-HHHH-HHHHHHhhhccCCCcHHHHHHHHHHhccHHHH-HHHHHHH-----
Confidence 4677999999999986663 345666644 3333 23334444456667888777776665322111 0001222
Q ss_pred EECChhHHHHHHHHHhhhhce
Q 018198 91 VFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 91 ~~~~~~~~~~i~~~L~k~~~v 111 (359)
.+..+.+.+.|++++.+
T Consensus 282 ----~~~~~~l~~~l~~~~~~ 298 (375)
T 3op7_A 282 ----EENLAILDQWIEEEPLV 298 (375)
T ss_dssp ----HHHHHHHHHHHHHCTTE
T ss_pred ----HHHHHHHHHHHhhCCCc
Confidence 44566667777776554
No 209
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=62.96 E-value=1.9 Score=39.17 Aligned_cols=19 Identities=16% Similarity=0.324 Sum_probs=16.3
Q ss_pred ccCCcEEEeeecccccCCc
Q 018198 10 EFGAGIVMHSASKFIARHS 28 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~ 28 (359)
++|+|+++.|++|++++++
T Consensus 187 ~~~~d~~~~s~~K~~g~~g 205 (382)
T 4hvk_A 187 KIGADMLTISSNDIYGPKG 205 (382)
T ss_dssp HHTCSEEEEESGGGTSCTT
T ss_pred hcCCCEEEEeHHHhcCCCc
Confidence 4689999999999887765
No 210
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=62.44 E-value=16 Score=29.49 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=25.4
Q ss_pred cEEEEcccCCCCCccceeecCCCeEEEEEeeec
Q 018198 296 GVIQIDASVNLGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 296 ~~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
.++.-..+..||+-||.|. ...-||||++++-
T Consensus 113 ~vl~~~G~~epGDCGG~L~-C~HGviGivTaGG 144 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILR-CEHGVIGLVTMGG 144 (166)
T ss_dssp SEEEEECSSSCCCCBSEEE-CSSSEEEEEEEEC
T ss_pred cEEEEecCCCCCCCCceee-eCCCceEEEecCC
Confidence 3444456788999999999 5667999999973
No 211
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=61.52 E-value=1.2 Score=42.94 Aligned_cols=98 Identities=10% Similarity=0.061 Sum_probs=56.2
Q ss_pred cccccC-CcEEEeeecccccCCcceeeeeee-eccccceeeEEEEeecCCCCccchhhhh---hh-----hccceeeeeE
Q 018198 7 RPLEFG-AGIVMHSASKFIARHSDVMACGIA-VNSERVQRHTISVFVGDESGILSRIDGV---FT-----RRNCNIESLG 76 (359)
Q Consensus 7 ~p~~~g-~d~~~~s~tK~~~gh~d~~~g~~~-~~~~~~~~~~l~~~~~~~G~~lsp~~a~---l~-----~RG~~tl~lr 76 (359)
..+++| ||++++|+.|-+--| ++|.++ .+++.+.++ +.....|..+..-++ +. ++||+-+=
T Consensus 268 sA~~~GrAD~vVqS~HK~llvp---IGG~ii~~~d~e~l~~----~~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll-- 338 (501)
T 3hl2_A 268 QGARVGRIDAFVQSLDKNFMVP---VGGAIIAGFNDSFIQE----ISKMYPGRASASPSLDVLITLLSLGSNGYKKLL-- 338 (501)
T ss_dssp HHHHHSCCCEEEEEHHHHHCCC---SSCEEEEESCHHHHHH----HHHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHhcCCCcEEEecccccceee---cCceEEEeCCHHHHHH----HHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHH--
Confidence 456789 999999999988555 445444 566555431 234444554444433 33 34442211
Q ss_pred eecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeeccCCCCCCCccc
Q 018198 77 VIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTKQSSSSSLEPFF 128 (359)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~~~~~~~~el~l 128 (359)
+.. .+.++.+.++|+++.....-..+..+.....+++
T Consensus 339 ------~e~---------~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~ 375 (501)
T 3hl2_A 339 ------KER---------KEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAM 375 (501)
T ss_dssp ------HHH---------HHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEE
T ss_pred ------HHH---------HHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEE
Confidence 233 6788889999998877444333334444444444
No 212
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=60.01 E-value=16 Score=30.42 Aligned_cols=63 Identities=16% Similarity=0.122 Sum_probs=44.1
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChh----HHHHHHHHHhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDR----ELQQVVKQLQKL 108 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~----~~~~i~~~L~k~ 108 (359)
..+.....+..|..+.+.++|..+|+|++..+..- ..+.--|++.+..+.. ..++|.+.|.+.
T Consensus 6 ~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~-~~~~f~m~~~v~~~~~~~~~~~~~l~~~L~~~ 72 (195)
T 2nyi_A 6 FVVSVAGSDRVGIVHDFSWALKNISANVESSRMAC-LGGDFAMIVLVSLNAKDGKLIQSALESALPGF 72 (195)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETTEEEEEEEEEESSSSSHHHHHHHHHHSTTC
T ss_pred EEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEE-ECCeEEEEEEEEecCccchhHHHHHHHHHHHH
Confidence 35778899999999999999999999999999943 3233223444442222 256676666643
No 213
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=58.66 E-value=1.1 Score=40.80 Aligned_cols=82 Identities=12% Similarity=-0.042 Sum_probs=42.7
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCcc---chhhhhhhhccceeeeeEeecccCCceE
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGIL---SRIDGVFTRRNCNIESLGVIGLNKDRAL 86 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~l---sp~~a~l~~RG~~tl~lr~~~~~~~~~~ 86 (359)
..++|+++.|+||+++|- .+|.++.+.+.+ + .+..+....++.+ ++..+ .....++..--++ ...
T Consensus 194 ~~~~d~~~~s~sK~~~~~---~gg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~-----~~~- 261 (357)
T 3lws_A 194 AGLFDSIYISFYKGLGGI---AGAILAGPAAFC-Q-TARIWKRRYGGDLISLYPYIV-SADYYYELRKDRM-----GQY- 261 (357)
T ss_dssp HTTSSEEEEESSSTTCCS---SCEEEEECHHHH-H-HHHHHHHHTTCCCSCCHHHHH-HHHHHHHHHTTCH-----HHH-
T ss_pred HhcCCEEEEeccccCCCC---ceEEEEcCHHHH-H-HHHHHHHHhcCCcccchHHHH-HHHHHHHHHHHHH-----HHH-
Confidence 356899999999999552 236666654333 2 2222223333322 22222 2223333211111 223
Q ss_pred EEEEEECChhHHHHHHHHHhhhhce
Q 018198 87 FTMVVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~L~k~~~v 111 (359)
.++.+.+.++|++++.+
T Consensus 262 --------~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 262 --------YEQAKQLAEQFNALPGV 278 (357)
T ss_dssp --------HHHHHHHHHHHHTSTTE
T ss_pred --------HHHHHHHHHHHHhCCCC
Confidence 55677888889887665
No 214
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=58.15 E-value=18 Score=28.52 Aligned_cols=31 Identities=26% Similarity=0.399 Sum_probs=24.7
Q ss_pred EEEEcccCCCCCccceeecCCCeEEEEEeeec
Q 018198 297 VIQIDASVNLGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 297 ~i~~~~~~~~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
++.-..+..||+-||.|. ...-||||++++-
T Consensus 94 ~l~g~G~~epGDCGG~L~-C~HGviGivTaGG 124 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLL-CKHGVIGIVTAGG 124 (142)
T ss_dssp EEEEECCCCTTCTTCEEE-ETTEEEEEEEEEC
T ss_pred EEEEEcCCCCCCCCceee-eCCCceEEEecCC
Confidence 334456788999999999 5677999999973
No 215
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=55.59 E-value=5.4 Score=36.38 Aligned_cols=31 Identities=10% Similarity=0.245 Sum_probs=22.3
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
++++|+++.|++|++.|... .|.++.+.+..
T Consensus 208 ~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~ 238 (390)
T 1elu_A 208 RLEVDYYAFTGHKWFAGPAG--VGGLYIHGDCL 238 (390)
T ss_dssp TSCCSEEEEESSSTTCCCTT--CEEEEECTTTG
T ss_pred hcCCCEEEccccccccCCCc--eEEEEECHHhH
Confidence 46899999999996666544 36777665443
No 216
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=53.92 E-value=2.2 Score=39.23 Aligned_cols=80 Identities=11% Similarity=0.038 Sum_probs=46.3
Q ss_pred cEEEeeec--ccccCCcceeeeeeeeccccc--eeeEEEEee-------------cCCCC--ccchhhhhhhhccceeee
Q 018198 14 GIVMHSAS--KFIARHSDVMACGIAVNSERV--QRHTISVFV-------------GDESG--ILSRIDGVFTRRNCNIES 74 (359)
Q Consensus 14 d~~~~s~t--K~~~gh~d~~~g~~~~~~~~~--~~~~l~~~~-------------~~~G~--~lsp~~a~l~~RG~~tl~ 74 (359)
|+++.|++ |.++|. .+|.++++++.+ .+ .+.... ...|. .+++..++....+++.+.
T Consensus 178 ~i~~~S~s~~K~l~g~---~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~ 253 (388)
T 1b9h_A 178 SIATFSFQNGKLMTAG---EGGAVVFPDGETEKYE-TAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD 253 (388)
T ss_dssp SCEEEECCTTSSSCSS---SCEEEEECTTCHHHHH-HHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH
T ss_pred ceEEEEccCCCcccCC---CeEEEEECCHHHHHHH-HHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHH
Confidence 78888876 888884 367888776544 22 111110 01122 267777777666655443
Q ss_pred eEeecccCCceEEEEEEECChhHHHHHHHHHhhhhce
Q 018198 75 LGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 75 lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v 111 (359)
-+. +.. .+..+.+.+.|++++.+
T Consensus 254 ~~~-----~~~---------~~~~~~l~~~L~~~~~~ 276 (388)
T 1b9h_A 254 EQI-----AVR---------DERWTLLSRLLGAIDGV 276 (388)
T ss_dssp HHH-----HHH---------HHHHHHHHHHHHTSTTC
T ss_pred HHH-----HHH---------HHHHHHHHHHhccCCCc
Confidence 333 334 55677778888877654
No 217
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=53.50 E-value=47 Score=23.77 Aligned_cols=33 Identities=15% Similarity=0.298 Sum_probs=29.1
Q ss_pred CeEEEEecCCcEEEEEEEEEc-CCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHD-QVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d-~~~DlAll~v~~ 242 (359)
+++.|.+.||+.|.+.+..+| ....+.|+....
T Consensus 18 KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~~ 51 (86)
T 1y96_A 18 KEVRVTASEKNEYKGWVLTTDPVSANIVLVNFLE 51 (86)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTTCCEEEEEECT
T ss_pred CEEEEEEcCCCEEEEEEEEECCCceEEEEeeccc
Confidence 579999999999999999999 567999998843
No 218
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=51.87 E-value=23 Score=25.41 Aligned_cols=68 Identities=13% Similarity=0.215 Sum_probs=46.8
Q ss_pred EEEeecCCCCccchhhhhhhhccceeeeeEee-ccc-CCceEEEEEEECChhHHHHHHHHHhhhhceeeee
Q 018198 47 ISVFVGDESGILSRIDGVFTRRNCNIESLGVI-GLN-KDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVS 115 (359)
Q Consensus 47 l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~-~~~-~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~ 115 (359)
+...+++...+-..++..|..=|-.+. -||+ +.. ++.+-|++.++++.+.+..+...|.+++.|.-..
T Consensus 10 igIiVe~r~~~a~kvn~iL~~yg~~I~-gRmGiP~~~~~~~iIsl~v~~~~d~I~aL~gkLg~i~GV~vKt 79 (86)
T 2nzc_A 10 LTIVVEDREKAYRQVNELLHNFSEDIL-LRVGYPVREENMAIIFLVLKTDNDTIGALSGKLGQISGVRVKT 79 (86)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTGGGEE-EEEEEEEGGGTEEEEEEEEEECHHHHHHHHHHHHTSTTEEEEE
T ss_pred EEEEEeCchhhHHHHHHHHHhccCEEE-EEcCCCcCcCCceEEEEEEECCHHHHHHHHHHhCCCCCEEEEE
Confidence 344445544444456665555554443 5885 333 5667899999999999999999999999885443
No 219
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=51.73 E-value=4.7 Score=36.65 Aligned_cols=85 Identities=9% Similarity=-0.064 Sum_probs=49.6
Q ss_pred cCCcEEEeeecccccCCcceeeeeee-eccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIA-VNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTM 89 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~-~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~ 89 (359)
++.|+++.|++|+++..+ .-.|.++ .+.+.. + .+.... .....+++..+...+.++... .+ ....+..
T Consensus 205 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~-~-~l~~~~--~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~---- 273 (364)
T 1lc5_A 205 NPHIWVLRSLTKFYAIPG-LRLGYLVNSDDAAM-A-RMRRQQ--MPWSVNALAALAGEVALQDSA-WQ-QATWHWL---- 273 (364)
T ss_dssp CTTEEEEEESTTTTTCTT-TCCEEEECCCHHHH-H-HHHHHS--CTTCSCHHHHHHHHHGGGCHH-HH-HHHHHHH----
T ss_pred CCCEEEEEECchhhcCCc-cceEEEEECCHHHH-H-HHHHhC--CCCCCCHHHHHHHHHHHhCcH-HH-HHHHHHH----
Confidence 588999999999997555 3446766 554332 2 121121 234578888887777776521 01 0001223
Q ss_pred EEECChhHHHHHHHHHhhhhce
Q 018198 90 VVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 90 ~~~~~~~~~~~i~~~L~k~~~v 111 (359)
.+..+.+.+.|++++.+
T Consensus 274 -----~~~~~~l~~~L~~~~~~ 290 (364)
T 1lc5_A 274 -----REEGARFYQALCQLPLL 290 (364)
T ss_dssp -----HHHHHHHHHHHHTSTTE
T ss_pred -----HHHHHHHHHHHhcCCCC
Confidence 45566777778776554
No 220
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=47.82 E-value=17 Score=28.27 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=22.3
Q ss_pred ceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHH
Q 018198 311 GPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQL 351 (359)
Q Consensus 311 gPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l 351 (359)
.|+.|.+|++||+++.+ ++.+.+...+.+.
T Consensus 111 ~PV~~~~g~viGvv~vg-----------~~~~~~~~~~~~~ 140 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIG-----------LELSRVTQQINDS 140 (142)
T ss_dssp EEEECTTSCEEEEEEEE-----------EEHHHHHHHHHC-
T ss_pred EeEEcCCCCEEEEEEEe-----------EEHHHHHHHHHHh
Confidence 48987789999998774 6777777766543
No 221
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=47.70 E-value=8.2 Score=35.42 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=24.1
Q ss_pred cccccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 7 RPLEFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 7 ~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
.+.++|+|+++.|++|+++|+.. .|.+..+.+.
T Consensus 184 ~~~~~~~d~~~~s~~K~l~~~~g--~g~~~~~~~~ 216 (379)
T 3ke3_A 184 DMKELGIDVLISAPQKGWSSTPC--AGLVMLSAAA 216 (379)
T ss_dssp CHHHHTCSEEEECTTTTTCSCCC--EEEEEECHHH
T ss_pred cccccCCCEEEecchhhcCCCCc--eEEEEECHHH
Confidence 34457999999999999998755 3555555443
No 222
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=47.57 E-value=2.8 Score=39.13 Aligned_cols=25 Identities=16% Similarity=0.101 Sum_probs=19.5
Q ss_pred CcEEEeee--cccccCCcceeeeeeeeccc
Q 018198 13 AGIVMHSA--SKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 13 ~d~~~~s~--tK~~~gh~d~~~g~~~~~~~ 40 (359)
.|+++.|+ +|++++ + .+|.++++++
T Consensus 181 ~~~~~~s~s~~K~~~~-g--~~g~~~~~~~ 207 (418)
T 2c81_A 181 GDIGAFSCQQGKVLTA-G--EGGIIVTKNP 207 (418)
T ss_dssp SSEEEEECCTTSSSCS-S--SCEEEEESCH
T ss_pred cceEEEeccCCcccCC-C--CeEEEEECCH
Confidence 48999998 999999 6 4677777543
No 223
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=46.27 E-value=2.6 Score=39.55 Aligned_cols=32 Identities=9% Similarity=0.055 Sum_probs=22.3
Q ss_pred ccccCCcEEEeeec--ccccCCcceeeeeeeeccccc
Q 018198 8 PLEFGAGIVMHSAS--KFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 8 p~~~g~d~~~~s~t--K~~~gh~d~~~g~~~~~~~~~ 42 (359)
++....|+++.|++ |.++| ..+|.++++++.+
T Consensus 184 ~~~~~~di~~~S~sk~K~l~~---~~~G~~v~~~~~l 217 (424)
T 2po3_A 184 PAGSLGDAEVFSFHATKAVNA---FEGGAVVTDDADL 217 (424)
T ss_dssp ETTSSSSEEEEECCTTSSSCC---SSCEEEEESCHHH
T ss_pred ecccccCEEEEeCCCCCCccC---CCCeEEEeCCHHH
Confidence 33333699999988 99988 3567777774343
No 224
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=45.21 E-value=44 Score=23.01 Aligned_cols=33 Identities=9% Similarity=0.133 Sum_probs=29.9
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+++..+|...++.|=....
T Consensus 15 k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 15 KKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 578999999999999999999999999988765
No 225
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=44.75 E-value=48 Score=22.78 Aligned_cols=60 Identities=17% Similarity=0.149 Sum_probs=39.7
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPL 271 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~ 271 (359)
..+.|.+.+|+.+.+.+..+|...++.|=.+......-....++ .-+-.|+.|..+.-|.
T Consensus 15 ~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e~~~~~~~~~lg--~v~iRG~~I~~i~~~d 74 (77)
T 1i4k_A 15 SPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEIQNGEVVRKVG--SVVIRGDTVVFVSPAP 74 (77)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEEETTEEEEEEE--EEEECGGGEEEEEECC
T ss_pred CEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEEEecCCcEeECC--EEEECCCEEEEEEeCC
Confidence 57899999999999999999999999988776422111222232 1122355566665543
No 226
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=44.63 E-value=45 Score=22.80 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=29.8
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+.+.++|...++.|=....
T Consensus 15 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 578999999999999999999999999887754
No 227
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=44.31 E-value=8.5 Score=34.84 Aligned_cols=86 Identities=12% Similarity=0.090 Sum_probs=50.0
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEE
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTM 89 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~ 89 (359)
..+.++++.|++|+ |....-.|.++++.+.. + .+.... .....++...+.....++.... + ....++.
T Consensus 215 ~~~~~i~~~s~sK~--~~~G~r~G~~~~~~~~~-~-~~~~~~--~~~~~~~~~~~a~~~~l~~~~~-~-~~~~~~~---- 282 (367)
T 3euc_A 215 DFGNLLVMRTVSKL--GLAGIRLGYVAGDPQWL-E-QLDKVR--PPYNVNVLTEATALFALEHVAV-L-DEQAAQL---- 282 (367)
T ss_dssp TCTTEEEEEECCCT--TSCSCCEEEEEECHHHH-H-HHGGGC--CSSCCCHHHHHHHHHHHTTHHH-H-HHHHHHH----
T ss_pred hCCCEEEEecchhh--cccccCceeeeeCHHHH-H-HHHHhC--CCCCCCHHHHHHHHHHhcCHHH-H-HHHHHHH----
Confidence 35677999999999 55556667777754433 2 121122 1334677777777766655110 1 0001333
Q ss_pred EEECChhHHHHHHHHHhhhhcee
Q 018198 90 VVFGTDRELQQVVKQLQKLVNVL 112 (359)
Q Consensus 90 ~~~~~~~~~~~i~~~L~k~~~v~ 112 (359)
.+..+.+.+.|++++.+.
T Consensus 283 -----~~~~~~l~~~l~~~~g~~ 300 (367)
T 3euc_A 283 -----RAERSRVAEGMAAHGGVT 300 (367)
T ss_dssp -----HHHHHHHHHHHHTSTTCE
T ss_pred -----HHHHHHHHHHHHhCCCcE
Confidence 566777788888876654
No 228
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=43.48 E-value=42 Score=23.96 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=29.7
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+.+.++|...+|.|=....
T Consensus 15 k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 578999999999999999999999999887654
No 229
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=43.46 E-value=13 Score=29.61 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=20.0
Q ss_pred CCCccceeecCCCeEEEEEeeec
Q 018198 306 LGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 306 ~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
.+.++-|++|.+|+++|+.+...
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~~D 69 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITESD 69 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEGGG
T ss_pred cCCeEEEEEcCCccEEEEEEHHH
Confidence 47789999999999999998653
No 230
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=42.98 E-value=68 Score=21.00 Aligned_cols=39 Identities=8% Similarity=0.266 Sum_probs=34.0
Q ss_pred cCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCC
Q 018198 206 ICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPN 244 (359)
Q Consensus 206 v~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~ 244 (359)
+....++-++-.||+-|.++++..+...+-+++++....
T Consensus 4 f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~s 42 (58)
T 4hcz_A 4 LWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDS 42 (58)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTSC
T ss_pred cccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCCC
Confidence 455677888889999999999999999999999998754
No 231
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=42.96 E-value=7.7 Score=35.25 Aligned_cols=29 Identities=14% Similarity=0.032 Sum_probs=21.1
Q ss_pred CCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 12 GAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 12 g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
|+|+++.|++|++.|...+ |.++.+++.+
T Consensus 236 ~~~~~~~s~~K~~~~~~~~--g~~~~~~~~~ 264 (397)
T 3f9t_A 236 GVDSITIDPHKMGHCPIPS--GGILFKDIGY 264 (397)
T ss_dssp TCSEEECCTTTTTCCCSSC--EEEEESSGGG
T ss_pred cCCeEEEccccccCCCCCc--eEEEEeCHHH
Confidence 9999999999999777643 4455544443
No 232
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=42.76 E-value=47 Score=23.16 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=30.0
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+.+..+|...++.|=.+..
T Consensus 20 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 20 NLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEE
Confidence 578999999999999999999999999988764
No 233
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=42.32 E-value=13 Score=33.55 Aligned_cols=31 Identities=16% Similarity=0.095 Sum_probs=23.6
Q ss_pred cccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 9 LEFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 9 ~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
.++|+|+++.|++|++++... .|.++++++.
T Consensus 195 ~~~~~di~~~s~sK~~~~~~g--~G~~~~~~~~ 225 (386)
T 2dr1_A 195 DKWGLDVVFSSSQKAFGVPPG--LAIGAFSERF 225 (386)
T ss_dssp TTTTCSEEEEETTSTTCCCSS--CEEEEECHHH
T ss_pred cccCCcEEEEeccccccCCCc--eEEEEECHHH
Confidence 356899999999999998744 4677766543
No 234
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=42.30 E-value=36 Score=30.25 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=43.0
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc-CCceEEEEEEECChhHHHHHHHHHhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN-KDRALFTMVVFGTDRELQQVVKQLQKL 108 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~-~~~~~~~~~~~~~~~~~~~i~~~L~k~ 108 (359)
..+.....+..|.+..+..+|..+|.|++.++..... .+.--|.+.+..+.....++.+.|+.+
T Consensus 8 ~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~L~~~f~~l 72 (287)
T 3nrb_A 8 YVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPVAGVNDFNSAFGKV 72 (287)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCCCCHHHHHHHHHHH
Confidence 3678889999999999999999999999999984211 233334445554332344566555443
No 235
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=42.29 E-value=8.7 Score=36.98 Aligned_cols=34 Identities=12% Similarity=-0.065 Sum_probs=23.6
Q ss_pred cccccCCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 7 RPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 7 ~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
.....|+|+++.|.+||+.|... .|.++.+++.+
T Consensus 297 ~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~ 330 (514)
T 3mad_A 297 DFRLEGVTSVSADTHKYGYGAKG--TSVILYRRPDL 330 (514)
T ss_dssp STTSTTCCEEEECTTTTTCCCSS--CEEEEESSHHH
T ss_pred cccCCCCcEEEECchhccCCCCC--eEEEEEeCHHH
Confidence 34567999999999999766554 35565555443
No 236
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=41.99 E-value=2.6 Score=38.78 Aligned_cols=57 Identities=7% Similarity=-0.093 Sum_probs=34.7
Q ss_pred CCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEe--ecCCCCccchhhhhhhhccceee
Q 018198 12 GAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVF--VGDESGILSRIDGVFTRRNCNIE 73 (359)
Q Consensus 12 g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~--~~~~G~~lsp~~a~l~~RG~~tl 73 (359)
+.|+++.|++|.++| .-+|.++++.+.... +... .....+.+++..+......++.+
T Consensus 235 ~~di~~~s~sK~~~g---~~gG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (399)
T 3tqx_A 235 RVDILTGTLGKALGG---ASGGYTSGHKEIIEW--LRNRSRPYLFSNTVAPVIVATSLKVLELL 293 (399)
T ss_dssp CCSEEEEESSSSSCS---SCCEEEEECHHHHHH--HHHHCHHHHSSCCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEecchHhccc---CceEEEEcCHHHHHH--HHHhCcceeccCCCcHHHHHHHHHHHHHH
Confidence 779999999999994 244777776644321 1111 11235567777766665555543
No 237
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=41.47 E-value=3.4 Score=37.92 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=21.4
Q ss_pred cC-CcEEEeeec--ccccCCcceeeeeeeecccc
Q 018198 11 FG-AGIVMHSAS--KFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 11 ~g-~d~~~~s~t--K~~~gh~d~~~g~~~~~~~~ 41 (359)
+| .|+++.|++ |+++|. .+|.++.+++.
T Consensus 174 ~~~~d~~~~S~~k~K~l~~~---~~g~~~~~~~~ 204 (393)
T 1mdo_A 174 IGARGTAIFSFHAIKNITCA---EGGIVVTDNPQ 204 (393)
T ss_dssp TTSSSEEEEECCTTSSSCSS---SCEEEEESCHH
T ss_pred cCCCCeEEEeCCCCCccccc---cceEEEeCCHH
Confidence 46 999999988 999883 46777776433
No 238
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=40.88 E-value=6.1 Score=37.02 Aligned_cols=81 Identities=9% Similarity=-0.057 Sum_probs=44.8
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEe--ecCCCCccchhhhhhhhccceeeeeEeecccCCceEEE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVF--VGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFT 88 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~--~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~ 88 (359)
-++|+++.|++|.++.. +|.++++.+.+ + .+... ....++.+++..+......++.+. .+ ....++.
T Consensus 253 ~~~di~~~s~sK~~g~~----gG~v~~~~~l~-~-~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~-~~-~~~~~~~--- 321 (427)
T 2w8t_A 253 GQIDFVVGTFSKSVGTV----GGFVVSNHPKF-E-AVRLACRPYIFTASLPPSVVATATTSIRKLM-TA-HEKRERL--- 321 (427)
T ss_dssp TCCSEEEEESSSTTCSC----CEEEEECCTTG-G-GGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT-SC-HHHHHHH---
T ss_pred cCCcEEEecchhhhccC----CCEEEeCHHHH-H-HHHHhcccccccCCCCHHHHHHHHHHHHHHh-cC-HHHHHHH---
Confidence 37899999999999743 47777765433 2 11111 112355677776665555555432 11 0001223
Q ss_pred EEEECChhHHHHHHHHHhhh
Q 018198 89 MVVFGTDRELQQVVKQLQKL 108 (359)
Q Consensus 89 ~~~~~~~~~~~~i~~~L~k~ 108 (359)
.+..+.+.+.|+++
T Consensus 322 ------~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 322 ------WSNARALHGGLKAM 335 (427)
T ss_dssp ------HHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHc
Confidence 45566666666665
No 239
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=40.60 E-value=3.3 Score=38.19 Aligned_cols=56 Identities=13% Similarity=-0.096 Sum_probs=34.8
Q ss_pred cCCcEEEeeecccc-cCCcceeeeeeeeccccceeeEEEEee--cCCCCccchhhhhhhhcccee
Q 018198 11 FGAGIVMHSASKFI-ARHSDVMACGIAVNSERVQRHTISVFV--GDESGILSRIDGVFTRRNCNI 72 (359)
Q Consensus 11 ~g~d~~~~s~tK~~-~gh~d~~~g~~~~~~~~~~~~~l~~~~--~~~G~~lsp~~a~l~~RG~~t 72 (359)
.++|+++.|++|.+ ++. +|.++++.+.+ + .+.... ....+.+++..++.....++.
T Consensus 236 ~~~di~~~s~sK~~~~~~----gG~~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~~~a~~~~l~~ 294 (401)
T 1fc4_A 236 GRVDIITGTLGKALGGAS----GGYTAARKEVV-E-WLRQRSRPYLFSNSLAPAIVAASIKVLEM 294 (401)
T ss_dssp TCCSEEEEESSSTTCSSS----CEEEEECHHHH-H-HHHHHCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred cCCcEEEecchhhccCCC----CEEEEcCHHHH-H-HHHHhCcCceeCCCCCHHHHHHHHHHHHH
Confidence 37899999999999 554 37777765433 2 121111 112456777777777666554
No 240
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=39.73 E-value=8.4 Score=34.65 Aligned_cols=83 Identities=12% Similarity=0.025 Sum_probs=49.1
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeee---eEeecccCCceE
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIES---LGVIGLNKDRAL 86 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~---lr~~~~~~~~~~ 86 (359)
..+.++++.|+||.++..+- -.|.++.+. .+.+ .+.... ....++++..+...+.++... -++ ...
T Consensus 185 ~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~- 253 (350)
T 3fkd_A 185 GRKNLVMVYSFSHAYGIPGL-RIGYIVANK-DFMK-RVAAFS--TPWAVNALAIEAAKFILIHPAQFTLPI-----RKW- 253 (350)
T ss_dssp TCSSEEEEEESHHHHSCGGG-CCEEEECCH-HHHH-HHHTTC--CTTCSCHHHHHHHHHHHHCTTTTCCCH-----HHH-
T ss_pred cCCCEEEEecCchhccCcch-heEeEEeCH-HHHH-HHHHhC--CCCCCCHHHHHHHHHHHhCHHHHHHHH-----HHH-
Confidence 35677999999999975553 345555543 3322 222121 234678888877777766432 111 222
Q ss_pred EEEEEECChhHHHHHHHHHhhhhce
Q 018198 87 FTMVVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~L~k~~~v 111 (359)
.+..+.+.++|++++.+
T Consensus 254 --------~~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 254 --------QRNTVDFITALNRLDGV 270 (350)
T ss_dssp --------HHHHHHHHHHHHHSTTE
T ss_pred --------HHHHHHHHHHHhcCCCc
Confidence 35667788888877654
No 241
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=39.68 E-value=62 Score=28.95 Aligned_cols=64 Identities=11% Similarity=0.154 Sum_probs=45.2
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc-CCceEEEEEEECCh--hHHHHHHHHHhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN-KDRALFTMVVFGTD--RELQQVVKQLQKL 108 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~-~~~~~~~~~~~~~~--~~~~~i~~~L~k~ 108 (359)
..+.....+..|.+..+..+|..+|.||+.++..-.. .+.--|.+.+..+. ...+++.+.|+.+
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~l 89 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPI 89 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHH
Confidence 4778899999999999999999999999999984221 23323444444332 3566666666544
No 242
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=39.59 E-value=57 Score=28.98 Aligned_cols=65 Identities=11% Similarity=0.074 Sum_probs=44.4
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc-CCc--eEEEEEEECChhHHHHHHHHHhhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN-KDR--ALFTMVVFGTDRELQQVVKQLQKLV 109 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~-~~~--~~~~~~~~~~~~~~~~i~~~L~k~~ 109 (359)
..+.....+..|.+..+..+|..+|.|++.++..... .+. .|+.+.........+++.+.|+.+-
T Consensus 7 ~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la 74 (288)
T 3obi_A 7 YVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIA 74 (288)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 3677889999999999999999999999999984211 222 2333333232235666766665543
No 243
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=39.51 E-value=59 Score=22.79 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=29.8
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+.+..+|...++.|=.+..
T Consensus 26 ~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 479999999999999999999999999887754
No 244
>2lqj_A Mg2+ transport protein; ACT domain, membrane protein, regulation, HYDR; NMR {Mycobacterium tuberculosis}
Probab=39.48 E-value=1.1e+02 Score=22.16 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=38.0
Q ss_pred hhhccceeeeeEeecccCCceEEEEEEE---CChhHHHHHHHHHhhhhceeeeeec
Q 018198 65 FTRRNCNIESLGVIGLNKDRALFTMVVF---GTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 65 l~~RG~~tl~lr~~~~~~~~~~~~~~~~---~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
|-.-+|..-+|+.....++...|+.++. -++..+++|+.+|...|.|..+...
T Consensus 31 L~~~~~~l~~l~s~~~~~~~veI~A~L~at~~~~~~Le~iv~rLs~ep~V~~a~W~ 86 (94)
T 2lqj_A 31 TSSNDITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHWY 86 (94)
T ss_dssp HHHHTEEEEEEEEEECSSSCEEEEEEEEEESCCHHHHHHHHHHHHHSTTEEEEEEE
T ss_pred HhcCCCceeEeeeecCCCCeEEEEEEEEecCCCHHHHHHHHHHHhCCCCeEEEEEE
Confidence 4445777777775332334344555555 5588999999999999999999875
No 245
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=39.46 E-value=15 Score=34.67 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=25.0
Q ss_pred cccccCCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 7 RPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 7 ~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
.++++|+|+++.|++|++.|..- +|.+..+++.+
T Consensus 196 ~~~~~g~Di~~~S~~K~l~~~~g--~g~l~~~~~~i 229 (446)
T 2x3l_A 196 STLNYQADYVVQSFHKTLPALTM--GSVLYIHKNAP 229 (446)
T ss_dssp CGGGGTCSEEEECHHHHSSSCTT--CEEEEEETTCT
T ss_pred ChHHcCCCEEEECCccccccccc--cEEEEEcCCcC
Confidence 45678999999999998877643 46666666543
No 246
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=38.77 E-value=61 Score=28.75 Aligned_cols=65 Identities=8% Similarity=0.050 Sum_probs=44.7
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecc-cCCceEEEEEEECC-hhHHHHHHHHHhhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGL-NKDRALFTMVVFGT-DRELQQVVKQLQKLV 109 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~-~~~~~~~~~~~~~~-~~~~~~i~~~L~k~~ 109 (359)
..+.....+..|.+..+..+|..+|.|++.++.... ..+.--|.+.+..+ ....+++.+.|+.+-
T Consensus 9 ~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~L~~~f~~la 75 (286)
T 3n0v_A 9 WILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDDFDEAGFRAGLAERS 75 (286)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 367888999999999999999999999999998421 12322344444432 234566666665443
No 247
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=38.68 E-value=52 Score=22.55 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=29.1
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+++..+|...++.|=.+..
T Consensus 15 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 4emk_B 15 KKVLIRLSSGVDYKGILSCLDGYMNLALERTEE 47 (75)
T ss_dssp SEEEEECTTSCEEEEEEEEECTTCEEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCcceEEEccEEE
Confidence 578999999999999999999999998877643
No 248
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=38.63 E-value=66 Score=22.79 Aligned_cols=61 Identities=11% Similarity=0.023 Sum_probs=40.0
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCC
Q 018198 209 ASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPL 271 (359)
Q Consensus 209 ~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~ 271 (359)
...+.|.+.+|+.+.+++.++|...++.|=.+......-....++ .-+--|+.|..++-|.
T Consensus 16 ~k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e~~~g~~~~~lg--~v~IRG~nI~~i~~~d 76 (86)
T 3s6n_F 16 GKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG--EVLIRCNNVLYIRGVE 76 (86)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEEETTEEEEEES--SEEECGGGEEEEEECC
T ss_pred CCeEEEEEcCCeEEEEEEEEEcCceEEEEeeEEEEcCCceeeEcc--EEEEeCCeEEEEEeCC
Confidence 357899999999999999999999999988775321111122332 1223356666665553
No 249
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=38.38 E-value=71 Score=21.90 Aligned_cols=33 Identities=6% Similarity=0.142 Sum_probs=29.8
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|..+.+++..+|..-++.|=.+..
T Consensus 16 ~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 578999999999999999999999999987754
No 250
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=38.26 E-value=4.3 Score=37.68 Aligned_cols=28 Identities=25% Similarity=0.081 Sum_probs=21.9
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
.++|+++.|++|.+++. +|.++++.+..
T Consensus 245 ~~~di~~~s~sK~~~~~----gg~v~~~~~~~ 272 (409)
T 3kki_A 245 REVHFMTASLAKTFAYR----AGAIWCNNEVN 272 (409)
T ss_dssp GGCSEEEEESSSTTCSS----CEEEEESSSGG
T ss_pred CCCCEEEeecchhhCCC----ceEEEECHHHH
Confidence 36899999999999987 47777766543
No 251
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=38.14 E-value=63 Score=28.76 Aligned_cols=64 Identities=14% Similarity=0.329 Sum_probs=43.9
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeec-ccCCceEEEEEEECC----hhHHHHHHHHHhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIG-LNKDRALFTMVVFGT----DRELQQVVKQLQKL 108 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~-~~~~~~~~~~~~~~~----~~~~~~i~~~L~k~ 108 (359)
..+.....+..|.+..+..+|..+|.|++.++... ...+.--|.+.+..+ ....+++.+.|+.+
T Consensus 11 ~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~l 79 (292)
T 3lou_A 11 FVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPI 79 (292)
T ss_dssp EEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHH
Confidence 46788999999999999999999999999999842 112222244444333 23456666666544
No 252
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=37.92 E-value=3.8 Score=37.89 Aligned_cols=58 Identities=7% Similarity=-0.129 Sum_probs=37.0
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
.+.++++.|++|.++.++ .-.|.++++.+.+. .+...........++...+.....++
T Consensus 229 ~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~l~ 286 (410)
T 3e2y_A 229 WERTITIGSAGKTFSVTG-WKLGWSIGPAHLIK--HLQTVQQNSFYTCATPLQAALAEAFW 286 (410)
T ss_dssp GGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHH--HHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred cCeEEEEecchhhcCCCC-ceEEEEEECHHHHH--HHHHHHHhhccCCChHHHHHHHHHHH
Confidence 355699999999998666 44556666554432 23333444456667777776666665
No 253
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=37.77 E-value=13 Score=34.09 Aligned_cols=29 Identities=14% Similarity=0.000 Sum_probs=22.9
Q ss_pred cccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 9 LEFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 9 ~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
.++|+|+++.|++|.+++.+ +|.++.+.+
T Consensus 218 ~~~~~di~~~s~sK~~~~~g---~G~~~~~~~ 246 (420)
T 1t3i_A 218 QLIDCDWLVASGHKMCAPTG---IGFLYGKEE 246 (420)
T ss_dssp HHHTCSEEEEEGGGTTSCTT---CEEEEECHH
T ss_pred hhcCCCEEEEehhhhcCCCc---eEEEEEchH
Confidence 35689999999999888777 567776654
No 254
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=37.47 E-value=51 Score=23.92 Aligned_cols=33 Identities=9% Similarity=0.135 Sum_probs=29.7
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
+.+.|.+.+|+.+.+.+.++|+..++.|=....
T Consensus 21 k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 21 ERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp SEEEEEEGGGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCCCcEEEcCEEE
Confidence 579999999999999999999999999887753
No 255
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=37.29 E-value=18 Score=32.66 Aligned_cols=31 Identities=6% Similarity=0.153 Sum_probs=22.9
Q ss_pred cccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 9 LEFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 9 ~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
-++|+|+++.|++|+++|... .|.++.+++.
T Consensus 176 ~~~~~d~~~~s~~K~~~~~~g--~g~~~~~~~~ 206 (384)
T 3zrp_A 176 EEWNVDVYLTASQKALGSAAG--LGLLLLSPKA 206 (384)
T ss_dssp TTTTCSEEEEETTSTTCCCSS--EEEEEECHHH
T ss_pred cccCCCEEEecCcccccCCCc--eEEEEECHHH
Confidence 356899999999999987655 4566665544
No 256
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=37.08 E-value=35 Score=24.36 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=26.9
Q ss_pred EEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 86 LFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
++.|.++|+++.++++.+||++-|.-.+|...
T Consensus 41 ~Vei~~eG~~~~i~~f~~~l~~gP~~a~V~~v 72 (88)
T 1ulr_A 41 RVEVVAEGPKEALELFLHHLKQGPRLARVEAV 72 (88)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHCSTTCEEEEE
T ss_pred cEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 68999999999999999999987765565554
No 257
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=37.05 E-value=66 Score=24.19 Aligned_cols=33 Identities=15% Similarity=0.357 Sum_probs=29.7
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+.+.++|...+|.|=.+..
T Consensus 34 k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 34 QRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 578999999999999999999999999887754
No 258
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=36.88 E-value=73 Score=21.83 Aligned_cols=33 Identities=12% Similarity=0.253 Sum_probs=29.6
Q ss_pred CeEEEEecCC-cEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQ-STFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g-~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+| +.+.+.+.++|...++.|=.+..
T Consensus 16 ~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 5788999999 99999999999999999887754
No 259
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=36.74 E-value=3.8 Score=37.50 Aligned_cols=58 Identities=9% Similarity=0.004 Sum_probs=33.1
Q ss_pred cccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEee--cCCCCccchhhhhhhhcccee
Q 018198 9 LEFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFV--GDESGILSRIDGVFTRRNCNI 72 (359)
Q Consensus 9 ~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~--~~~G~~lsp~~a~l~~RG~~t 72 (359)
+..+.|+++.|++|+++..+ |.++++.+.. + .+.... ...+..+++.........++.
T Consensus 223 ~~~~~di~~~s~sK~~~~~G----G~~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~~~~~~~al~~ 282 (384)
T 1bs0_A 223 QKVKPELLVVTFGKGFGVSG----AAVLCSSTVA-D-YLLQFARHLIYSTSMPPAQAQALRASLAV 282 (384)
T ss_dssp TTCCCSEEEEESSSTTSSCC----EEEEECHHHH-H-HHHHHCHHHHSSBCCCHHHHHHHHHHHHH
T ss_pred cCCCCcEEEeeccchhhccC----cEEEeCHHHH-H-HHHHhchhhhcCCCCCHHHHHHHHHHHHH
Confidence 34579999999999998543 7777764432 2 111111 112234677666555554443
No 260
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=36.70 E-value=23 Score=31.59 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=22.0
Q ss_pred cccccC-CcEEEeeecccccCCcceeeeeeeeccc
Q 018198 7 RPLEFG-AGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 7 ~p~~~g-~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
.|+++. +|+++.|++|+++|...+ |.++.+.+
T Consensus 175 ~~~~~~~~d~~~~s~~K~~~~~~G~--g~~~~~~~ 207 (362)
T 3ffr_A 175 PKFDWTKIDSVFFSVQKCFGLPAGL--GVWILNDR 207 (362)
T ss_dssp SCCCTTSCSEEEEETTSTTCCCSCC--EEEEEEHH
T ss_pred cccChhHCcEEEEecccccCCCCce--EEEEECHH
Confidence 344444 999999999999965542 45555543
No 261
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=36.63 E-value=64 Score=23.26 Aligned_cols=34 Identities=9% Similarity=0.134 Sum_probs=30.1
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 209 ASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 209 ~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 19 ~~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 19 DEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp TSEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 3578999999999999999999999999887754
No 262
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=36.57 E-value=64 Score=23.40 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=29.4
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 479999999999999999999999999877654
No 263
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=35.54 E-value=13 Score=33.61 Aligned_cols=27 Identities=15% Similarity=0.293 Sum_probs=18.4
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
+|+|+++.|++|+.+..+ + |.++.+++
T Consensus 188 ~~~di~~~s~sK~~g~~g--~-G~~~~~~~ 214 (382)
T 4eb5_A 188 IGADMLTISSNDIYGPKG--V-GALWIRKE 214 (382)
T ss_dssp HTCSEEEEETGGGTCCSS--C-EEEEEETT
T ss_pred cCCCEEEeehHHhcCCCc--e-EEEEEccc
Confidence 589999999999855333 3 44444444
No 264
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=35.36 E-value=54 Score=22.86 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=29.7
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+.+..+|...++.|=.+..
T Consensus 22 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 578999999999999999999999999887754
No 265
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=34.95 E-value=29 Score=33.11 Aligned_cols=31 Identities=19% Similarity=0.146 Sum_probs=23.7
Q ss_pred ccccccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 6 LRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 6 ~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
..|+. ++|+++.|++|++.|.. +|.++++++
T Consensus 241 ~~p~~-~~div~~s~~K~l~Gpr---gG~i~~~~~ 271 (483)
T 1rv3_A 241 PSPFE-HCHVVTTTTHKTLRGCR---AGMIFYRRG 271 (483)
T ss_dssp CCGGG-TCSEEEEESSGGGCCCS---CEEEEEECS
T ss_pred CCCCC-CCcEEEecCcccCCCCC---ceEEEEcch
Confidence 34554 89999999999997764 377777765
No 266
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=34.65 E-value=3.5 Score=37.81 Aligned_cols=58 Identities=10% Similarity=0.003 Sum_probs=33.8
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
.+.|+++.|++|+++..+ .-.|.++++.+.. + .+...........+++..+.....++
T Consensus 226 ~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 283 (388)
T 1j32_A 226 YERSVVCSGFAKTYAMTG-WRVGFLAGPVPLV-K-AATKIQGHSTSNVCTFAQYGAIAAYE 283 (388)
T ss_dssp HHTEEEEEESTTTTTCTT-TCCEEEECCHHHH-H-HHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred cCCEEEEeechhccCCcc-cceEEEEeCHHHH-H-HHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 578999999999996555 3346666655432 2 22223333344556666655544443
No 267
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=34.48 E-value=21 Score=31.78 Aligned_cols=30 Identities=13% Similarity=0.171 Sum_probs=22.2
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++|+|+++.|++|++.|...+ |.++++++.
T Consensus 181 ~~~~di~~~s~~K~~~~~~g~--G~~~~~~~~ 210 (366)
T 1m32_A 181 ALHIDYLISSANKCIQGVPGF--AFVIAREQK 210 (366)
T ss_dssp TTTCSEEEEESSSTTCCCSSE--EEEEEEHHH
T ss_pred ccCccEEEecCcccccCCCce--EEEEECHHH
Confidence 357999999999988665443 777776543
No 268
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=34.08 E-value=24 Score=27.89 Aligned_cols=23 Identities=9% Similarity=0.242 Sum_probs=19.4
Q ss_pred CCCCccceeecCCCeEEEEEeee
Q 018198 305 NLGNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 305 ~~G~SGgPl~~~~G~viGi~~~~ 327 (359)
..|.|+=|++|.+|+++|+.+..
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~~ 67 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGLR 67 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEHH
T ss_pred HcCCcEEEEEcCCCcEEEEEEec
Confidence 46899999999999999999864
No 269
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=34.07 E-value=19 Score=32.84 Aligned_cols=15 Identities=20% Similarity=0.127 Sum_probs=12.4
Q ss_pred CcEEEeeecccccCC
Q 018198 13 AGIVMHSASKFIARH 27 (359)
Q Consensus 13 ~d~~~~s~tK~~~gh 27 (359)
+|+++.|++|+.++.
T Consensus 211 ~d~~~~s~~K~~g~~ 225 (400)
T 3vax_A 211 IDMISISGHKIGAPK 225 (400)
T ss_dssp CSEEEEETGGGTSCS
T ss_pred CcEEEEeHHHhCCCC
Confidence 999999999965544
No 270
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=33.55 E-value=94 Score=25.51 Aligned_cols=63 Identities=22% Similarity=0.148 Sum_probs=43.2
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecc---c--CCceEEEEEEEC-ChhHHHHHHHHHhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGL---N--KDRALFTMVVFG-TDRELQQVVKQLQKL 108 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~---~--~~~~~~~~~~~~-~~~~~~~i~~~L~k~ 108 (359)
..+.....+..|.+..+..+|..+|+|++.++-.-. + .+.-.|.+.+.. +... +++.+.|.++
T Consensus 94 ~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~~~~-~~l~~~l~~~ 162 (195)
T 2nyi_A 94 YELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPFPLY-QEVVTALSRV 162 (195)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEGGGH-HHHHHHHHHH
T ss_pred EEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCCCcc-HHHHHHHHHH
Confidence 467788889999999999999999999999988421 1 122234444432 2334 6777777654
No 271
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=33.53 E-value=8.2 Score=35.40 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=20.4
Q ss_pred CcEEEeeec--ccccCCcceeeeeeeeccccc
Q 018198 13 AGIVMHSAS--KFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 13 ~d~~~~s~t--K~~~gh~d~~~g~~~~~~~~~ 42 (359)
.|+++.|++ |+++| +. +|.++++++.+
T Consensus 195 ~di~~~S~s~~K~l~~-g~--gg~~~~~~~~~ 223 (391)
T 3dr4_A 195 GDCATFSFFGNAIITT-GE--GGMITTNDDDL 223 (391)
T ss_dssp SSEEEEECBTTSSSCC-BS--CEEEEESCHHH
T ss_pred CCEEEEECCCCCcCCc-CC--eEEEEECCHHH
Confidence 599999965 99988 54 67777766544
No 272
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=33.30 E-value=78 Score=23.88 Aligned_cols=34 Identities=9% Similarity=0.257 Sum_probs=30.7
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 209 ASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 209 ~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 4689999999999999999999999999987764
No 273
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=33.04 E-value=5 Score=36.92 Aligned_cols=58 Identities=7% Similarity=-0.164 Sum_probs=33.1
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
.+.++++.|++|.++..+- -.|.++++.+.. + .+...........+++..+....-++
T Consensus 242 ~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 299 (407)
T 3nra_A 242 AENVVTIMGPSKTESLSGY-RLGVAFGSRAII-A-RMEKLQAIVSLRAAGYSQAVLRGWFD 299 (407)
T ss_dssp GGGEEEEECSSSTTCCGGG-CCEEEEECHHHH-H-HHHHHHHHHTSSSCHHHHGGGGGTTC
T ss_pred CCcEEEEeCcccccCCCee-eEEEEEcCHHHH-H-HHHHHHhhhccCCChHHHHHHHHHHh
Confidence 5678999999999975543 345566554332 2 22223333344456666655555544
No 274
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=32.88 E-value=23 Score=31.87 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=22.0
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++|+|+++.|++|++.|...+ |.++.+++.
T Consensus 189 ~~~~d~~~~s~~K~~~~~~G~--G~~~~~~~~ 218 (385)
T 2bkw_A 189 EWGVDFALTASQKAIGAPAGL--SISLCSSRF 218 (385)
T ss_dssp TTTCSEEEEESSSTTCCCSCE--EEEEECHHH
T ss_pred ccCceEEEecCccccccCCcc--eEEEEcHHH
Confidence 468999999999988764443 666666544
No 275
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=31.99 E-value=23 Score=27.93 Aligned_cols=17 Identities=29% Similarity=0.428 Sum_probs=14.8
Q ss_pred ceeecCCCeEEEEEeee
Q 018198 311 GPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 311 gPl~~~~G~viGi~~~~ 327 (359)
-|++|.+|+++||++..
T Consensus 118 lpVVd~~g~l~GiiT~~ 134 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITRK 134 (156)
T ss_dssp EEEECTTSBEEEEEEHH
T ss_pred eEEEecCCEEEEEEEHH
Confidence 59999999999998764
No 276
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=31.97 E-value=11 Score=36.27 Aligned_cols=28 Identities=18% Similarity=0.171 Sum_probs=22.0
Q ss_pred CCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 12 GAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 12 g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++|+++-|.+|++++..+ +|.+..+++.
T Consensus 303 ~~D~i~~~~hK~~~~p~~--~g~l~~~~~~ 330 (504)
T 2okj_A 303 RANSVTWNPHKMMGVLLQ--CSAILVKEKG 330 (504)
T ss_dssp GCSEEEECTTSTTCCCSC--CEEEEESSTT
T ss_pred cCCEEEECchhhcCCCcc--eEEEEEECHH
Confidence 899999999999997654 4677766643
No 277
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=31.96 E-value=56 Score=27.99 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=27.7
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
+++.|.+.||+.+.+++..+|...+|.|=.+..
T Consensus 15 KrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred CeEEEEECCCcEEEEEEEEEcccccEEecCEEE
Confidence 578899999999999999999988888765543
No 278
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=31.93 E-value=90 Score=28.83 Aligned_cols=63 Identities=13% Similarity=0.172 Sum_probs=45.1
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChh--HHHHHHHHHhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDR--ELQQVVKQLQKL 108 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~--~~~~i~~~L~k~ 108 (359)
..+.....+..|+++.+..+|...|.|++.++... ..+.--|.+.+..+.. ..+++.+.|+.+
T Consensus 13 ~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~-~~~~f~~~~~~~~~~~~~~~~~l~~~l~~~ 77 (415)
T 3p96_A 13 VLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVV-IRHRLTLGVLVCCPADVADGPALRHDVEAA 77 (415)
T ss_dssp EEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEE-ETTEEEEEEEEEECHHHHTSHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEE-ECCEeEEEEEEEecCCcCCHHHHHHHHHHH
Confidence 36778899999999999999999999999999842 2333334444444433 336676666654
No 279
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=31.68 E-value=1.1e+02 Score=23.08 Aligned_cols=61 Identities=13% Similarity=0.165 Sum_probs=42.4
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLG 272 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~ 272 (359)
..+.|.+.+|..+.+++..+|...++.|=.+......-....++ .-+--|+.|..+.-|..
T Consensus 13 k~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg--~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLE--TLSIRGNNIRYFILPDS 73 (119)
T ss_dssp CEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCTT
T ss_pred CEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcc--eEEEcCCeEEEEEeccc
Confidence 57899999999999999999999999988776432211223332 12234677777776654
No 280
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=31.50 E-value=6.3 Score=36.24 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=21.8
Q ss_pred cccccCCcEEEeeecccccCCcc-eeeeeeeecccc
Q 018198 7 RPLEFGAGIVMHSASKFIARHSD-VMACGIAVNSER 41 (359)
Q Consensus 7 ~p~~~g~d~~~~s~tK~~~gh~d-~~~g~~~~~~~~ 41 (359)
....+|++..+.+++|+.+.+-. -.+|.++++++.
T Consensus 171 ~~~~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~ 206 (390)
T 3b8x_A 171 NNKCAGTFGLMGTFSSFYSNHIATMEGGCIVTDDEE 206 (390)
T ss_dssp TTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHH
T ss_pred CCcccccccceEEEEccCCCCCccCCceEEEeCCHH
Confidence 34467887777788876554422 146778777643
No 281
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=31.40 E-value=19 Score=32.69 Aligned_cols=28 Identities=11% Similarity=0.103 Sum_probs=22.3
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
++|+|+++.|++|.+++.+ .|.++++.+
T Consensus 214 ~~~~d~~~~s~~K~~g~~G---~G~~~~~~~ 241 (406)
T 1kmj_A 214 ALDCDFYVFSGHKLYGPTG---IGILYVKEA 241 (406)
T ss_dssp HHTCSEEEEEGGGTTSCTT---CEEEEECHH
T ss_pred ccCCCEEEEEchhccCCCC---cEEEEEeHH
Confidence 4689999999999998777 467776654
No 282
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=31.38 E-value=35 Score=31.17 Aligned_cols=29 Identities=21% Similarity=0.213 Sum_probs=21.6
Q ss_pred cccccCCcEEEeeecccccCCcceeeeeeeecc
Q 018198 7 RPLEFGAGIVMHSASKFIARHSDVMACGIAVNS 39 (359)
Q Consensus 7 ~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~ 39 (359)
.+++ .+|+++.|++|.++|.. +|.+++++
T Consensus 218 ~~~~-~~di~~~s~sK~~~g~~---gg~~~~~~ 246 (420)
T 3gbx_A 218 NPVP-HAHVVTTTTHKTLAGPR---GGLILAKG 246 (420)
T ss_dssp CSTT-TSSEEEEESSGGGCSCS---CEEEEESS
T ss_pred cccc-cCCEEEeecccCCCCCC---ceEEEEcC
Confidence 3344 49999999999997643 47777765
No 283
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=31.21 E-value=25 Score=26.28 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=17.1
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||.+..
T Consensus 98 ~~~~lpVvd~~g~~~Giit~~ 118 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTIE 118 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEeCCCCEEEEEEHH
Confidence 445679999999999998864
No 284
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=31.15 E-value=32 Score=32.25 Aligned_cols=31 Identities=16% Similarity=0.132 Sum_probs=23.2
Q ss_pred ccccccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 6 LRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 6 ~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
..|++ ++|+++.|++|.++|. .+|.++++.+
T Consensus 233 ~~~~~-~~di~~~s~sK~l~G~---~gG~i~~~~~ 263 (447)
T 3h7f_A 233 PSPVP-HADVVSTTVHKTLGGG---RSGLIVGKQQ 263 (447)
T ss_dssp CCSTT-TCSEEEEESSGGGCCC---SCEEEEECGG
T ss_pred CCCCC-CCcEEEecCCcCCCCC---CeEEEEECHH
Confidence 34553 7899999999999874 4577777654
No 285
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=31.04 E-value=97 Score=22.92 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=29.6
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
..+.|.+.+|+.+.+++..+|...++.|=.+..
T Consensus 27 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~e 59 (105)
T 4emh_A 27 RPILVELKNGETFNGHLENCDNYMNLTLREVIR 59 (105)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEcCCceEEEEEEEE
Confidence 578999999999999999999999999887753
No 286
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=30.80 E-value=75 Score=30.13 Aligned_cols=70 Identities=10% Similarity=0.204 Sum_probs=51.4
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeeccc--CCceEEEEEEE-CChhHHHHHHHHHhhhhceeee
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLN--KDRALFTMVVF-GTDRELQQVVKQLQKLVNVLKV 114 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~--~~~~~~~~~~~-~~~~~~~~i~~~L~k~~~v~~v 114 (359)
+-++..+.+..|+++.+...|...|+.+.++.=.+.. .+...+.+++. ..+.++++..+.|++++.|..+
T Consensus 360 yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~~~e~~~~~~~~~~~~~~~v~~~ 432 (444)
T 3mtj_A 360 YYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHVTLEKNVNAAIAKIEALDAVAGK 432 (444)
T ss_dssp EEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECSEEHHHHHHHHHHHTTSTTBCSC
T ss_pred eEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEeccCCHHHHHHHHHHHhcCCccccC
Confidence 4456677899999999999999999999998863321 12345554444 6789999999999999877644
No 287
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=30.70 E-value=33 Score=24.67 Aligned_cols=33 Identities=9% Similarity=0.145 Sum_probs=27.2
Q ss_pred eEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 85 ALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
-++.|.++|+++.++++.+||++-|.-.+|...
T Consensus 42 G~Vei~~~G~~~~v~~f~~~l~~gP~~a~V~~v 74 (91)
T 1w2i_A 42 GSVEAVLEGDEERVEALIGWAHQGPPLARVTRV 74 (91)
T ss_dssp SCEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEE
T ss_pred CCEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 368999999999999999999987765666554
No 288
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=30.48 E-value=14 Score=33.83 Aligned_cols=59 Identities=5% Similarity=-0.114 Sum_probs=36.6
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceee
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIE 73 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl 73 (359)
....|++ +++|.++| +..-.|.++++.+.. + .+...........++..+......++.+
T Consensus 241 ~~~~d~~--~~SK~l~g-G~~~~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 299 (392)
T 3ruy_A 241 NVTPDMY--ILGKALGG-GVFPISCAAANRDIL-G-VFEPGSHGSTFGGNPLACAVSIAALEVL 299 (392)
T ss_dssp TCCCSEE--EECGGGGT-TTSCCEEEEECHHHH-T-TCCTTSSCCSSTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEE--EEchhhhC-ChhhhEEEEECHHHH-h-hhccCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 4567887 56799998 545567777765433 2 2222233345567888887777776643
No 289
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=36.41 E-value=11 Score=34.62 Aligned_cols=59 Identities=10% Similarity=-0.022 Sum_probs=32.8
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCC-Cccchhhhhhhhccce
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDES-GILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G-~~lsp~~a~l~~RG~~ 71 (359)
.+.++++.|++|.++..+ .-.|.+++.++.+.+ .+.......+ +..++...+....-++
T Consensus 227 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~ 286 (392)
T 3b1d_A 227 KDFALVLSSATKTFNIAG-TKNSYAIIENPTLCA-QFKHQQLVNNHHEVSSLGYIATETAYR 286 (392)
Confidence 567799999999996444 445666665554443 3333333332 2345555554444443
No 290
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=30.17 E-value=4.2 Score=37.03 Aligned_cols=88 Identities=7% Similarity=-0.062 Sum_probs=47.0
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMV 90 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~ 90 (359)
.+.++++.|++|.++..+- -.|.++..++.+.+ .+...........++...+.....++...--+ ....+..
T Consensus 212 ~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~----- 283 (377)
T 3fdb_A 212 ASVCITITAPSKAWNIAGL-KCAQIIFSNPSDAE-HWQQLSPVIKDGASTLGLIAAEAAYRYGTDFL-NQEVAYL----- 283 (377)
T ss_dssp HHHEEEEECSTTTTTCGGG-CCEEEECCSHHHHH-HHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHH-HHHHHHH-----
T ss_pred CCcEEEEEeChHhccCcch-hheEEEeCCHHHHH-HHHHHHHhhcCCCCHHHHHHHHHHHhccHHHH-HHHHHHH-----
Confidence 3556999999999965553 34444443333322 22223333345677777776666655321000 0001233
Q ss_pred EECChhHHHHHHHHHhh-hhc
Q 018198 91 VFGTDRELQQVVKQLQK-LVN 110 (359)
Q Consensus 91 ~~~~~~~~~~i~~~L~k-~~~ 110 (359)
.+..+.+.++|++ ++.
T Consensus 284 ----~~~~~~l~~~L~~~~~~ 300 (377)
T 3fdb_A 284 ----KNNHDFLLHEIPKRIPG 300 (377)
T ss_dssp ----HHHHHHHHHHHHHHSTT
T ss_pred ----HHHHHHHHHHHHhhCCC
Confidence 5566777777877 444
No 291
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=30.09 E-value=26 Score=26.58 Aligned_cols=22 Identities=23% Similarity=0.292 Sum_probs=17.8
Q ss_pred CCccceeecCCCeEEEEEeeec
Q 018198 307 GNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+..--|++|.+|+++||.+...
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~~D 120 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTIED 120 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEHHH
T ss_pred CCeEEEEEeCCCCEEEEEEHHH
Confidence 4456799999999999998764
No 292
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=30.04 E-value=23 Score=33.35 Aligned_cols=27 Identities=11% Similarity=0.274 Sum_probs=20.3
Q ss_pred ccCCcEEEeeecccccCCcceeeeeee
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIA 36 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~ 36 (359)
++|+|+++.|.+||++|...-+|+.++
T Consensus 264 ~~~~D~~~~s~~K~l~~gp~~~g~l~~ 290 (465)
T 3e9k_A 264 DWGVDFACWCSYKYLNAGAGGIAGAFI 290 (465)
T ss_dssp HHTCCEEEECSSSTTCCCTTCCCEEEE
T ss_pred hcCCCEEEECcccccccCCCceEEEEE
Confidence 579999999999999755555554443
No 293
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=29.80 E-value=27 Score=26.02 Aligned_cols=21 Identities=33% Similarity=0.259 Sum_probs=16.4
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+...=|++|.+|+++|+.+..
T Consensus 98 ~~~~lpVvd~~g~~~Giit~~ 118 (128)
T 3gby_A 98 KCSVVPLADEDGRYEGVVSRK 118 (128)
T ss_dssp SSSEEEEECTTCBEEEEEEHH
T ss_pred CCcEEEEECCCCCEEEEEEHH
Confidence 334569999999999997753
No 294
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=29.75 E-value=21 Score=32.56 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=21.4
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++|+|+++.|++|+++++ +||.++++++.
T Consensus 215 ~~~~d~~~~s~~K~~g~~---~G~~~~~~~~~ 243 (406)
T 3cai_A 215 ETDADVVTVNAHAWGGPP---IGAMVFRDPSV 243 (406)
T ss_dssp HHCCSEEEEEGGGGTSCS---CEEEEESCHHH
T ss_pred hcCCCEEEeehhhhcCCC---cCeEEEEehHH
Confidence 468999999999988653 44377766543
No 295
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=29.67 E-value=33 Score=30.80 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=22.3
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++++|+++.|++|+.+..+ .|.++++++.
T Consensus 191 ~~~~di~~~s~sK~~g~~G---~G~~~~~~~~ 219 (384)
T 1eg5_A 191 KLEVDYASFSAHKFHGPKG---VGITYIRKGV 219 (384)
T ss_dssp TTCCSEEEEEGGGGTSCTT---CEEEEECTTS
T ss_pred hcCCCEEEecHHHhcCCCc---eEEEEEcCCC
Confidence 4589999999999977666 3677776653
No 296
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=29.44 E-value=27 Score=26.26 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=16.8
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||.+..
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~~ 119 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTVE 119 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEcCCCCEEEEeeHH
Confidence 445678999899999998864
No 297
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=28.96 E-value=28 Score=26.05 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=16.7
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||.+..
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~~ 121 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTLE 121 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEcCCCCEEEEEEHH
Confidence 445678999899999998764
No 298
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=28.76 E-value=32 Score=26.20 Aligned_cols=18 Identities=28% Similarity=0.588 Sum_probs=15.3
Q ss_pred ceeecCCCeEEEEEeeec
Q 018198 311 GPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 311 gPl~~~~G~viGi~~~~~ 328 (359)
.|++|.+|++||+++.+.
T Consensus 106 ~PV~~~~g~viGvv~vg~ 123 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGY 123 (131)
T ss_dssp EEEECTTCCEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEE
Confidence 489987899999988865
No 299
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=28.59 E-value=94 Score=22.36 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=30.1
Q ss_pred CCeEEEEecCC-cEEEEEEEEEcCCCCEEEEEEcC
Q 018198 209 ASTVKVSFSDQ-STFYAQVVGHDQVNDLAVLHIDA 242 (359)
Q Consensus 209 ~~~~~v~~~~g-~~~~~~v~~~d~~~DlAll~v~~ 242 (359)
...+.|.+.+| +.+.+++.++|...++.|=.+..
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 36899999999 99999999999999999887754
No 300
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=28.46 E-value=1.6e+02 Score=23.84 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=44.6
Q ss_pred eEEEEeecCCCCccchhhhhhhhccceeeeeEeecc-------cCCceEEEEEEEC-ChhHHHHHHHHHhhhh
Q 018198 45 HTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGL-------NKDRALFTMVVFG-TDRELQQVVKQLQKLV 109 (359)
Q Consensus 45 ~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~-------~~~~~~~~~~~~~-~~~~~~~i~~~L~k~~ 109 (359)
..+.....+..|.+..+..+|..+|+|+..++-.-. ..+.-.|.+.+.. +....+++.+.|.++-
T Consensus 94 ~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 94 VEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALC 166 (192)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 467778889999999999999999999999887421 1223334444442 3335667777776544
No 301
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=28.33 E-value=28 Score=26.07 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=15.9
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||.+..
T Consensus 98 ~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEHH
T ss_pred CCeEEEEEeCCCCEEEEEEHH
Confidence 445678999889999998764
No 302
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=28.03 E-value=9.5 Score=34.47 Aligned_cols=82 Identities=7% Similarity=-0.085 Sum_probs=45.6
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMV 90 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~ 90 (359)
.+.++++.|++|.++..+--+ |.++++.+ +.+ .+...... ..+++...+.....++... .+ ....+..
T Consensus 216 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~-~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~----- 283 (365)
T 3get_A 216 FDNVLYLGTFSKLYGLGGLRI-GYGIANAN-IIS-AFYKLRAP--FNVSNLALKAAVAAMDDDE-FT-EKTLENN----- 283 (365)
T ss_dssp CTTEEEEEESSSTTSCTTTCC-EEEEECHH-HHH-HHHHHSCT--TCSCHHHHHHHHHHHTCHH-HH-HHHHHHH-----
T ss_pred CCCEEEEeecchHhcCcchhe-EEEEcCHH-HHH-HHHHhcCC--CCcCHHHHHHHHHHhCCHH-HH-HHHHHHH-----
Confidence 478899999999997666444 45555443 322 22222222 2367777777766665320 01 0011233
Q ss_pred EECChhHHHHHHHHHhhh
Q 018198 91 VFGTDRELQQVVKQLQKL 108 (359)
Q Consensus 91 ~~~~~~~~~~i~~~L~k~ 108 (359)
.+..+.+.+.|+++
T Consensus 284 ----~~~~~~l~~~l~~~ 297 (365)
T 3get_A 284 ----FSQMELYKEFAKKH 297 (365)
T ss_dssp ----HHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHhC
Confidence 45666677777776
No 303
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=27.98 E-value=5.2 Score=36.55 Aligned_cols=87 Identities=10% Similarity=-0.062 Sum_probs=45.5
Q ss_pred Cc--EEEeeecccccCCcceeeeeeeeccccceeeEEEEeec-CCCCccchhhhhhhhccceeeeeEeecccCCceEEEE
Q 018198 13 AG--IVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVG-DESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTM 89 (359)
Q Consensus 13 ~d--~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~-~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~ 89 (359)
.| +++.|++|.++..+ .-.|.++++++.+.+ .+..... ......++...+.....++...-.+ ....+..
T Consensus 223 ~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~---- 295 (391)
T 3dzz_A 223 KNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRA-RAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWL-RELKQVL---- 295 (391)
T ss_dssp GGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHH-HHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHH-HHHHHHH----
T ss_pred cCcEEEEEeChhhccccc-hhheEEEECCHHHHH-HHHHHHHhhccCCCCHHHHHHHHHHHhccHHHH-HHHHHHH----
Confidence 67 99999999996444 345666665444433 2222211 1223566666665555554311001 0001233
Q ss_pred EEECChhHHHHHHHHHhh-hhce
Q 018198 90 VVFGTDRELQQVVKQLQK-LVNV 111 (359)
Q Consensus 90 ~~~~~~~~~~~i~~~L~k-~~~v 111 (359)
.+..+.+.+.|++ ++.+
T Consensus 296 -----~~~~~~l~~~l~~~~~~~ 313 (391)
T 3dzz_A 296 -----RDNFAYAREFLAKEVPEV 313 (391)
T ss_dssp -----HHHHHHHHHHHHHHCTTS
T ss_pred -----HHHHHHHHHHHHhhCCCc
Confidence 4566677777877 4554
No 304
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=27.42 E-value=11 Score=33.91 Aligned_cols=81 Identities=15% Similarity=0.074 Sum_probs=45.1
Q ss_pred CCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEE
Q 018198 12 GAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVV 91 (359)
Q Consensus 12 g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~ 91 (359)
+.++++.|++|.++..+ .-.|.++++.+.. + .+..... ...+++...+.....++... .+ ....+..
T Consensus 203 ~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~a~~~~l~~~~-~~-~~~~~~~------ 269 (354)
T 3ly1_A 203 ENIILLKTFSKIHAMAG-MRVGYAVAHPTVI-A-LMGRYVA--GEKINFSGVDAALASMNDSA-FI-TYSKKSN------ 269 (354)
T ss_dssp SSEEEEEESSSTTCCGG-GCCEEEECCHHHH-H-HHGGGTT--CSCCCHHHHHHHHHHTTCHH-HH-HHHHHHH------
T ss_pred CCEEEEeeChhhccChh-hhheeeecCHHHH-H-HHHHhcC--CCCCCHHHHHHHHHHhcCHH-HH-HHHHHHH------
Confidence 67799999999995333 4456666654332 2 2222222 25677877777777666321 01 0001233
Q ss_pred ECChhHHHHHHHHHhhh
Q 018198 92 FGTDRELQQVVKQLQKL 108 (359)
Q Consensus 92 ~~~~~~~~~i~~~L~k~ 108 (359)
.+..+.+.+.|+++
T Consensus 270 ---~~~~~~l~~~l~~~ 283 (354)
T 3ly1_A 270 ---DVSRQILLKALEDL 283 (354)
T ss_dssp ---HHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHC
Confidence 45566666667665
No 305
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=27.42 E-value=51 Score=24.23 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=36.8
Q ss_pred CCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHh-hhhceeeeeec
Q 018198 55 SGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQ-KLVNVLKVSTK 117 (359)
Q Consensus 55 G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-k~~~v~~v~~~ 117 (359)
-|+-=|--.|-..+.+..-.- + .+...-++.|.++|+++.++++.+||+ +-|.-.+|...
T Consensus 22 QGVGFR~~v~~~A~~lgL~G~-V--~N~~dG~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~~v 82 (102)
T 1urr_A 22 QGVFFRKHTSHEAKRLGVRGW-C--MNTRDGTVKGQLEAPMMNLMEMKHWLENNRIPNAKVSKA 82 (102)
T ss_dssp SSSSHHHHHHHHHHHHTCEEE-E--EECTTSCEEEEEEECHHHHHHHHHHHHHCCSTTCEEEEE
T ss_pred CCcChhHHHHHHHHHhCCcEE-E--EECCCCCEEEEEEcCHHHHHHHHHHHHhcCCCccEEEEE
Confidence 344444444444444443332 1 121233689999999999999999998 56665566554
No 306
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=27.35 E-value=38 Score=30.93 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=23.4
Q ss_pred cccccCCcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 7 RPLEFGAGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 7 ~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
.+++. +|+++.|++|.++|. .+|.+++.++.+
T Consensus 221 ~~~~~-~di~~~s~sK~l~g~---~~g~~~~~~~~~ 252 (425)
T 3ecd_A 221 NPVEH-AHVVTSTTHKTLRGP---RGGFVLTNDEEI 252 (425)
T ss_dssp CGGGT-CSEEEEESSGGGCCC---SCEEEEESCHHH
T ss_pred Cchhc-CcEEEecCCcccCCC---CcEEEEeCCHHH
Confidence 44444 899999999999774 367777775444
No 307
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=27.28 E-value=27 Score=31.17 Aligned_cols=87 Identities=9% Similarity=0.024 Sum_probs=48.7
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMV 90 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~ 90 (359)
.+.++++.|++|.++..+-- .|.+++.++.+.+ .+.... ....+++...+.....++... .+ ....+..
T Consensus 204 ~~~~i~~~s~sK~~~~~G~r-~g~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~----- 272 (361)
T 3ftb_A 204 YSCLFIIRAMTKFFAMPGIR-FGYGITNNKEIAA-KIKAKQ--NPWNINCFAEMAAINCLKDTN-YI-EESLLWI----- 272 (361)
T ss_dssp CSSEEEEEESSSTTSCGGGC-CEEEEESCHHHHH-HHHTTS--CTTCSCHHHHHHHHHTSSCHH-HH-HHHHHHH-----
T ss_pred CCCEEEEeeChhhcCCCCcc-eeEEEeCCHHHHH-HHHhhC--CCCCCCHHHHHHHHHHhcCHH-HH-HHHHHHH-----
Confidence 35569999999999756543 3455533333332 222121 234677777777777766310 00 0111333
Q ss_pred EECChhHHHHHHHHHhhhhcee
Q 018198 91 VFGTDRELQQVVKQLQKLVNVL 112 (359)
Q Consensus 91 ~~~~~~~~~~i~~~L~k~~~v~ 112 (359)
.+..+.+.+.|++++.+.
T Consensus 273 ----~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 273 ----KKERKRFIEELNKIGFIK 290 (361)
T ss_dssp ----HHHHHHHHHHHHHSSSEE
T ss_pred ----HHHHHHHHHHHHhCCCCc
Confidence 556777778888776654
No 308
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=27.22 E-value=1.5e+02 Score=20.02 Aligned_cols=39 Identities=8% Similarity=0.135 Sum_probs=33.0
Q ss_pred cCCCCeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCC
Q 018198 206 ICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPN 244 (359)
Q Consensus 206 v~~~~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~ 244 (359)
+.....+..+-.||.-|++++..++....-+++++....
T Consensus 14 f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~s 52 (66)
T 2eqj_A 14 FEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSS 52 (66)
T ss_dssp SCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTTE
T ss_pred ccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccCC
Confidence 344567778889999999999999999999999998743
No 309
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=27.18 E-value=6.7 Score=36.34 Aligned_cols=59 Identities=5% Similarity=-0.073 Sum_probs=36.2
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhcccee
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNI 72 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~t 72 (359)
.+.++++.|++|.++..+- -.|.++++.+.+ + .+...........++...+.....++.
T Consensus 236 ~~~~i~~~S~sK~~g~~G~-r~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 236 WERTLTIGSAGKTFSATGW-KVGWVLGPDHIM-K-HLRTVHQNSVFHCPTQSQAAVAESFER 294 (422)
T ss_dssp GGGEEEEEEHHHHHTCGGG-CCEEEECCHHHH-H-HHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred cCcEEEEecchhccCCccc-eEEEEEeCHHHH-H-HHHHHHhhccCCCCcHHHHHHHHHHhh
Confidence 4667999999999964543 345666655433 2 222333444556677777776666654
No 310
>3mgj_A Uncharacterized protein MJ1480; saccharop_DH_N domain, NESG, structural genomics, PSI-2, protein structure initiative; 2.70A {Methanocaldococcus jannaschii}
Probab=26.71 E-value=1.2e+02 Score=22.95 Aligned_cols=41 Identities=12% Similarity=0.303 Sum_probs=30.7
Q ss_pred cceeeeeEeecccCCceEEEEEEE-CChhHHHHHHHHHhhhh
Q 018198 69 NCNIESLGVIGLNKDRALFTMVVF-GTDRELQQVVKQLQKLV 109 (359)
Q Consensus 69 G~~tl~lr~~~~~~~~~~~~~~~~-~~~~~~~~i~~~L~k~~ 109 (359)
.|+++.+.+++...+.+.-.+.+. .|++.+++|..+|..+-
T Consensus 31 ~F~I~~f~vG~~k~d~SyA~l~V~a~d~e~L~~Il~~L~~lG 72 (118)
T 3mgj_A 31 DYKVLEFEIGKRKTDPSYAKILVIGRDERHVDEILNELRDLG 72 (118)
T ss_dssp EEEEEEEECCSSTTSCEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCcceEEEEEecCCHHHHHHHHHHHHHcC
Confidence 478999999766666665445554 56889999999998873
No 311
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=26.61 E-value=13 Score=33.77 Aligned_cols=86 Identities=12% Similarity=0.059 Sum_probs=45.5
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeee-EeecccCCceEEEE
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESL-GVIGLNKDRALFTM 89 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~l-r~~~~~~~~~~~~~ 89 (359)
++.++++.|++|.++..+ .-.|.++++.+.. + .+..... ....++...+....-++.... .+ ....+..
T Consensus 203 ~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~-~-~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~---- 272 (356)
T 1fg7_A 203 YPHLAILRTLSKAFALAG-LRCGFTLANEEVI-N-LLMKVIA--PYPLSTPVADIAAQALSPQGIVAM-RERVAQI---- 272 (356)
T ss_dssp CTTEEEEEESSSTTCCGG-GCCEEEEECHHHH-H-HHHHHSC--SSCSCHHHHHHHHHHTSHHHHHHH-HHHHHHH----
T ss_pred CCCEEEEecchHhhcCch-hhhEEEEeCHHHH-H-HHHHhcC--CCCCCHHHHHHHHHHhcCccHHHH-HHHHHHH----
Confidence 478999999999997554 3345666654332 2 2222222 224666666655555543211 01 0001222
Q ss_pred EEECChhHHHHHHHHHhhhhce
Q 018198 90 VVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 90 ~~~~~~~~~~~i~~~L~k~~~v 111 (359)
.+..+.+.+.|++++.+
T Consensus 273 -----~~~~~~l~~~L~~~~~~ 289 (356)
T 1fg7_A 273 -----IAEREYLIAALKEIPCV 289 (356)
T ss_dssp -----HHHHHHHHHHHHHSTTE
T ss_pred -----HHHHHHHHHHHHhCCCc
Confidence 44556677778776654
No 312
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=26.60 E-value=78 Score=25.82 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=25.4
Q ss_pred ceeecCCCeEEEEEeeecCCCcceeEEEEehHHHHHHHHHHH
Q 018198 311 GPLLDSSGSLIGVNTFITSGAFSGIGFALPIDTVRGIVDQLV 352 (359)
Q Consensus 311 gPl~~~~G~viGi~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 352 (359)
-|+.+.+|+++|+... .++.+.+.++++++.
T Consensus 130 ~pi~~~~g~~~Gvl~~-----------~i~l~~l~~~~~~~~ 160 (217)
T 4dah_A 130 VPVLDSKRNVTDYLVA-----------AIQIDYLKNLINLLS 160 (217)
T ss_dssp EEEECTTSCEEEEEEE-----------EEEHHHHHHHHHHHC
T ss_pred EEEECCCCCEEEEEEE-----------EEcHHHHHHHHHhcC
Confidence 4888878999999776 478888888888764
No 313
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=26.55 E-value=34 Score=25.01 Aligned_cols=21 Identities=29% Similarity=0.411 Sum_probs=16.8
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+.+--|++|.+|+++|+.+..
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~~ 112 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTSE 112 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEHH
T ss_pred CCCeEEEECCCCCEEEEEeHH
Confidence 445679999889999998764
No 314
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=26.34 E-value=8.1 Score=35.70 Aligned_cols=58 Identities=12% Similarity=-0.082 Sum_probs=32.3
Q ss_pred cCC-cEEEeeecccccCCcceeeeeee--eccc---cceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 11 FGA-GIVMHSASKFIARHSDVMACGIA--VNSE---RVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~-d~~~~s~tK~~~gh~d~~~g~~~--~~~~---~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
.+. |+++.|++|.++..+--+ |.++ .+.. .+.+ .+....... ...++...+.+..-++
T Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~l~~-~l~~~~~~~-~~~~~~~~~a~~~~l~ 296 (406)
T 1xi9_A 233 KDVPVIVMNGLSKVYFATGWRL-GYMYFVDPENKLSEVRE-AIDRLARIR-LCPNTPAQFAAIAGLT 296 (406)
T ss_dssp SSSCEEEEEESTTTTCCGGGCC-EEEEEECTTCTTHHHHH-HHHHHHHHT-CCSCSHHHHHHHHHHH
T ss_pred CCceEEEEeccccccCCCccEE-EEEEEecCchhHHHHHH-HHHHHHHhh-cCCCHHHHHHHHHHHh
Confidence 367 899999999998666434 4554 4441 3332 222222222 4556666665555553
No 315
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=26.33 E-value=11 Score=34.20 Aligned_cols=59 Identities=14% Similarity=0.017 Sum_probs=37.2
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhcccee
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNI 72 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~t 72 (359)
.+.|+++.|++|.++..+ .-.|.++++++.. + .+...........++...+.....++.
T Consensus 211 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~~~l~~ 269 (370)
T 2z61_A 211 LEKTILINGFSKLYAMTG-WRIGYVISNDEII-E-AILKLQQNLFISAPTISQYAALKAFEK 269 (370)
T ss_dssp CSSEEEEEESTTTTTCGG-GCCEEEECCHHHH-H-HHHHHHHHHTSSSCHHHHHHHGGGGSH
T ss_pred CCcEEEEecChhccCCcc-ceEEEEEECHHHH-H-HHHHHHhhcccCCCHHHHHHHHHHHhc
Confidence 488999999999996554 3456777665432 2 222233333456777777776666654
No 316
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=25.45 E-value=31 Score=35.05 Aligned_cols=32 Identities=31% Similarity=0.353 Sum_probs=22.7
Q ss_pred ccccc---CCc----EEEeeecccccCCcceeeeeeeeccc
Q 018198 7 RPLEF---GAG----IVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 7 ~p~~~---g~d----~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
.|+.+ |+| ++++|++|.++|.+- +|.+..+++
T Consensus 333 ~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~--gg~I~v~~~ 371 (730)
T 1c4k_A 333 SPLLIDDLGPEDPGIIVVQSVHKQQAGFSQ--TSQIHKKDS 371 (730)
T ss_dssp CTTSCCCCCTTSCEEEEEECHHHHSSCCTT--CEEEEEECG
T ss_pred CcccccccCCCCCCEEEEECCCCCCCCCCC--EEEEEecch
Confidence 35654 999 999999999998763 345544443
No 317
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=25.32 E-value=34 Score=26.64 Aligned_cols=21 Identities=29% Similarity=0.343 Sum_probs=16.6
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||.+..
T Consensus 132 ~~~~~~Vvd~~g~~~Givt~~ 152 (156)
T 3oi8_A 132 RNHMAIVIDEYGGTSGLVTFE 152 (156)
T ss_dssp TCCEEEEECTTSSEEEEEEHH
T ss_pred CCeEEEEECCCCCEEEEEEHH
Confidence 344569999999999998863
No 318
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=25.29 E-value=1.1e+02 Score=21.15 Aligned_cols=35 Identities=9% Similarity=0.282 Sum_probs=28.9
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPN 244 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~ 244 (359)
.++.++-.||.-|.++++.++...+-++++++...
T Consensus 31 eDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~S 65 (79)
T 2m0o_A 31 QDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDS 65 (79)
T ss_dssp CEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCCC
Confidence 44555567899999999999999999999998754
No 319
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=25.27 E-value=35 Score=26.16 Aligned_cols=21 Identities=24% Similarity=0.140 Sum_probs=16.6
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||.+..
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~~ 137 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTIE 137 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEHH
T ss_pred CCeEEEEEeCCCCEEEEEEHH
Confidence 344569999899999998764
No 320
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=25.23 E-value=46 Score=22.32 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=16.0
Q ss_pred CCccceeecCCCeEEEEEeeec
Q 018198 307 GNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+.++=|++| +|+++||.+-..
T Consensus 22 ~i~~~~V~d-~~~lvGIvT~~D 42 (70)
T 3ghd_A 22 KAGSAVVME-GDEILGVVTERD 42 (70)
T ss_dssp TCSEEEEEE-TTEEEEEEEHHH
T ss_pred CCCEEEEEE-CCEEEEEEEHHH
Confidence 555667775 799999998753
No 321
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=25.18 E-value=33 Score=26.58 Aligned_cols=21 Identities=19% Similarity=0.096 Sum_probs=17.0
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||.+..
T Consensus 115 ~~~~lpVvd~~g~~vGivt~~ 135 (153)
T 3oco_A 115 RVPMAIVIDEYGGTSGIITDK 135 (153)
T ss_dssp TCSCEEEECTTSCEEEEECHH
T ss_pred CCcEEEEEeCCCCEEEEeeHH
Confidence 445669999899999998874
No 322
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=25.08 E-value=28 Score=33.03 Aligned_cols=36 Identities=17% Similarity=0.164 Sum_probs=26.2
Q ss_pred ccccccCCcEEEeeecccccCC---cceeeeeeeecccc
Q 018198 6 LRPLEFGAGIVMHSASKFIARH---SDVMACGIAVNSER 41 (359)
Q Consensus 6 ~~p~~~g~d~~~~s~tK~~~gh---~d~~~g~~~~~~~~ 41 (359)
.+|.++|+|+++.|++|++++. +-.-.|.++++++.
T Consensus 250 ~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l 288 (474)
T 1wyu_B 250 ARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL 288 (474)
T ss_dssp CCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG
T ss_pred CCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHH
Confidence 3667789999999999998854 23345677776654
No 323
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=24.70 E-value=37 Score=25.96 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=14.5
Q ss_pred ceeecCCCeEEEEEeee
Q 018198 311 GPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 311 gPl~~~~G~viGi~~~~ 327 (359)
-|++|.+|+++||.+..
T Consensus 119 l~Vvd~~g~~~Giit~~ 135 (150)
T 3lqn_A 119 ICAVNEDGYFEGILTRR 135 (150)
T ss_dssp EEEECTTCBEEEEEEHH
T ss_pred EEEECCCCcEEEEEEHH
Confidence 69999899999997763
No 324
>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae}
Probab=24.69 E-value=65 Score=33.58 Aligned_cols=61 Identities=23% Similarity=0.344 Sum_probs=36.0
Q ss_pred EEEEEEeCCCEEEecccccCCCCeEEEEecCC-c-----EEEEEEEEEc--------C-CCCEEEEEEcCCCCCccceEe
Q 018198 188 GAGFLWDQDGHIVTNYHVICGASTVKVSFSDQ-S-----TFYAQVVGHD--------Q-VNDLAVLHIDAPNHELRPIHV 252 (359)
Q Consensus 188 GsGfii~~~g~vlT~~Hvv~~~~~~~v~~~~g-~-----~~~~~v~~~d--------~-~~DlAll~v~~~~~~~~~~~l 252 (359)
|.+.+|++. ||++.+|.. +. -.|.|.++ . ...-+++... + ..|+..=|+..-..++.|+.+
T Consensus 58 GvATLi~pQ-YiVSVkHN~-gy--~~v~FG~~~~n~d~h~~~Y~iV~RNn~~~~~~~~~~~Dfh~PRLnK~VTEvaP~~~ 133 (1011)
T 3syj_A 58 GVAALVENQ-YIVSVAHNV-GY--TDVDFGAEGNNPDQHRFTYKIVKRNNYKKDNLHPYEDDYHNPRLHKFVTEAAPIDM 133 (1011)
T ss_dssp SSCEEEETT-EEEBCTTCC-SC--CEECCSCSSCCGGGCCCCEEEEECCBCCCBTTBCSCSCCBCCEESSCCCSSCCCCB
T ss_pred ceeEEecCc-eEEEEEecC-Cc--cceecccCCCCccccccceEEEeccCCCcccccCcccccccccccceEEeeccccc
Confidence 778899987 999999964 22 24666543 1 1122344332 1 248888888764434444443
No 325
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=24.65 E-value=24 Score=32.59 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=20.7
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++++|+++.|++|++ |- - .|.++.+++.
T Consensus 235 ~~~~d~~~~s~~K~~-g~--~-~G~~~~~~~~ 262 (432)
T 3a9z_A 235 DLGVDFLTIVGHKFY-GP--R-IGALYVRGVG 262 (432)
T ss_dssp HHCCSEEEEEGGGTT-CC--S-CEEEEETTBT
T ss_pred hcCCCEEEEehhHhc-CC--c-ceEEEEcccc
Confidence 368999999999987 42 2 6777776654
No 326
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=24.63 E-value=63 Score=23.15 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=25.9
Q ss_pred eEEEEEEECChhHHHHHHHHH-hhhhceeeeeec
Q 018198 85 ALFTMVVFGTDRELQQVVKQL-QKLVNVLKVSTK 117 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~L-~k~~~v~~v~~~ 117 (359)
-++.|.++|+++.++++.+|| ++-|.-.+|...
T Consensus 42 G~Vei~~eG~~~~i~~f~~~l~~~gP~~a~V~~v 75 (92)
T 2gv1_A 42 GSVEVVACGEEGQVEKLMQWLKSGGPRSARVERV 75 (92)
T ss_dssp SCEEEEECSCHHHHHHHHHHHHHTSSTTSEEEEE
T ss_pred CcEEEEEEeCHHHHHHHHHHhhccCCCceEEEEE
Confidence 368899999999999999999 766655555443
No 327
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=24.59 E-value=17 Score=32.65 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=47.2
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEE
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTM 89 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~ 89 (359)
..+-++++.|++|.++..+--+ |.++++.+.. + .+..... ...+++...+.....++... -+ ....+..
T Consensus 213 ~~~~~i~~~s~sK~~g~~G~r~-G~~~~~~~~~-~-~l~~~~~--~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~---- 281 (363)
T 3ffh_A 213 TYKNLIITRTFSKIYGLASARV-GYGIADKEII-R-QLNIVRP--PFNTTSIGQKLAIEAIKDQA-FI-GECRTSN---- 281 (363)
T ss_dssp TCTTEEEEEESSSTTCCSSCCC-EEEEECHHHH-H-HHHHTCC--SCCCBHHHHHHHHHHHHCHH-HH-HHHHHHH----
T ss_pred cCCCEEEEeechhhhcCchhce-eeeecCHHHH-H-HHHHhCC--CCCCCHHHHHHHHHHhcCHH-HH-HHHHHHH----
Confidence 3456689999999997666433 4555544332 2 1222222 44578888777777765220 01 0001233
Q ss_pred EEECChhHHHHHHHHHhhhhce
Q 018198 90 VVFGTDRELQQVVKQLQKLVNV 111 (359)
Q Consensus 90 ~~~~~~~~~~~i~~~L~k~~~v 111 (359)
.+..+.+.++|++++.+
T Consensus 282 -----~~~~~~l~~~l~~~~g~ 298 (363)
T 3ffh_A 282 -----ANGIKQYEAFAKRFEKV 298 (363)
T ss_dssp -----HHHHHHHHHHHHHCTTC
T ss_pred -----HHHHHHHHHHHhhCCCc
Confidence 45666677777775543
No 328
>2l1t_A Uncharacterized protein; putative C-DI-GMP binding, GSU3033, PILZ, structural genomic biology, protein structure initiative; NMR {Geobacter sulfurreducens}
Probab=24.49 E-value=2.2e+02 Score=21.20 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=38.1
Q ss_pred eEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEec
Q 018198 211 TVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGH 269 (359)
Q Consensus 211 ~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~ 269 (359)
++.|.+.++..+.-.-+-..-+.|+..|++.... |+....+..|+.+.+-.|
T Consensus 20 ~V~ipL~~~~~F~dwAiIt~~~~dli~lqLsrd~-------LP~~v~l~~G~~l~v~~~ 71 (109)
T 2l1t_A 20 NLTVRLGDTGSFDGTAAITSLKGSLAWLELFGAE-------QPPPNTLSEGAEVSVSVW 71 (109)
T ss_dssp EEEEEETTTEEEEEEEEEEEEETTEEEECCSSSC-------CCCTTTCCTTCEEEEEEE
T ss_pred EEEEEcCCCCeEcCceEEEEecCCEEEEEeeccc-------CCCceeEecccEEEEEEc
Confidence 3556668888887776667778999999998743 444567788988876544
No 329
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=24.46 E-value=34 Score=30.96 Aligned_cols=29 Identities=14% Similarity=0.295 Sum_probs=21.1
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
++|+|+++.|.+|++.|...+ |.++.+++
T Consensus 193 ~~~~d~~~~s~~K~~~~~~g~--g~~~~~~~ 221 (396)
T 2ch1_A 193 KWEIDAVYTGAQKVLGAPPGI--TPISISPK 221 (396)
T ss_dssp TTTCCEEECCCC-CCCCCSSC--EEEEECHH
T ss_pred hcCcCEEEEcCCccccCCCCe--EEEEECHH
Confidence 468999999999998887655 56666543
No 330
>2h9z_A Hypothetical protein HP0495; feredoxin-like (beta-alpha-beta-BETA-alpha-beta), structural genomics, unknown function; NMR {Helicobacter pylori} SCOP: d.58.54.2 PDB: 2joq_A
Probab=24.43 E-value=1.7e+02 Score=20.54 Aligned_cols=67 Identities=13% Similarity=0.230 Sum_probs=39.5
Q ss_pred EEEEeecCCCC-ccchhhhhhhhccceeeeeEeecccCCceEEEEEEE-CChhHHHHHHHHHhhhhceeee
Q 018198 46 TISVFVGDESG-ILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVF-GTDRELQQVVKQLQKLVNVLKV 114 (359)
Q Consensus 46 ~l~~~~~~~G~-~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~-~~~~~~~~i~~~L~k~~~v~~v 114 (359)
.++....+..+ ....+...+ .|.+.....|- ....+.+-+|+.+. .+.+..+.|.+.|.+++.|.-|
T Consensus 17 ~~Kvig~~~~~~~~~~V~~v~-~~~~~~~~~r~-Ss~GkY~Svtv~i~a~s~eq~~~iY~~L~~~~~Vk~v 85 (86)
T 2h9z_A 17 DYRVIMTTKDTSTLKELLETY-QRPFKLEFKNT-SKNAKFYSFNVSMEVSNESERNEIFQKISQLDKVVQT 85 (86)
T ss_dssp EEEEEECCSCTHHHHHHSTTC-CSSEECCBSCS-SCCSSCEEEEEEEECCSHHHHHHHHHHHTCSSCEEEE
T ss_pred eEEEEEECCcHHHHHHHHHHH-hccCCCccccc-CCCCeEEEEEEEEEECCHHHHHHHHHHHhcCCCEEEe
Confidence 34444444444 344444444 44553211121 11234566888887 5588999999999999998765
No 331
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=24.31 E-value=13 Score=33.95 Aligned_cols=58 Identities=7% Similarity=0.025 Sum_probs=33.7
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
.+.|+++.|++|+++..+ .-.|.++++.+.. + .+...........+++..+....-++
T Consensus 235 ~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~-~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 292 (389)
T 1o4s_A 235 FDRIVYINGFSKSHSMTG-WRVGYLISSEKVA-T-AVSKIQSHTTSCINTVAQYAALKALE 292 (389)
T ss_dssp STTEEEEEESTTTTTCGG-GCCEEEECCHHHH-H-HHHHHHHHHTCSCCHHHHHHHHHHTT
T ss_pred CCcEEEEeechhhcCCcc-cceEEEEeCHHHH-H-HHHHHhhhcccCCCHHHHHHHHHHHh
Confidence 489999999999996454 4456777655432 2 22222222233446666665555444
No 332
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=24.27 E-value=46 Score=30.21 Aligned_cols=27 Identities=19% Similarity=0.143 Sum_probs=21.0
Q ss_pred CcEEEeeecccccCCcceeeeeeeeccccc
Q 018198 13 AGIVMHSASKFIARHSDVMACGIAVNSERV 42 (359)
Q Consensus 13 ~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~ 42 (359)
+|+++.|++|.++|.. +|.++++++.+
T Consensus 217 ~di~~~s~sK~l~g~~---~G~~~~~~~~~ 243 (407)
T 2dkj_A 217 AHVVTSTTHKTLRGPR---GGLILSNDPEL 243 (407)
T ss_dssp CSEEEEESSGGGCCCS---CEEEEESCHHH
T ss_pred ccEEEEeccccCCCCC---ceEEEECCHHH
Confidence 8999999999998754 47888774333
No 333
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=23.97 E-value=40 Score=25.38 Aligned_cols=21 Identities=29% Similarity=0.281 Sum_probs=16.5
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++|+.+..
T Consensus 113 ~~~~l~Vvd~~g~~~Giit~~ 133 (144)
T 2nyc_A 113 RVHRFFVVDDVGRLVGVLTLS 133 (144)
T ss_dssp TCSEEEEECTTSBEEEEEEHH
T ss_pred CCCEEEEECCCCCEEEEEEHH
Confidence 344569999889999998763
No 334
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=23.94 E-value=56 Score=24.00 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=26.8
Q ss_pred eEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 85 ALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
-++.|.++|+++.++++.++|++-|.-.+|...
T Consensus 52 G~Vei~~eG~~~~i~~f~~~l~~gP~~A~V~~v 84 (101)
T 2bjd_A 52 GSVEVVAEGYEEALSKLLERIKQGPPAAEVEKV 84 (101)
T ss_dssp SCEEEEEEEEHHHHHHHHHHHTTCSTTCEEEEE
T ss_pred CcEEEEEEeCHHHHHHHHHHHHhCCCccEEEEE
Confidence 378999999999999999999987655555543
No 335
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=23.65 E-value=39 Score=28.07 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=18.1
Q ss_pred CCccceeecCCCeEEEEEeeec
Q 018198 307 GNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+..--|++|.+|+++||++...
T Consensus 146 ~~~~lpVVD~~g~lvGiIT~~D 167 (205)
T 3kxr_A 146 REIELPVIDDAGELIGRVTLRA 167 (205)
T ss_dssp SCSEEEEECTTSBEEEEEEHHH
T ss_pred CCCEEEEEcCCCeEEEEEEHHH
Confidence 4456799999999999998764
No 336
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=23.55 E-value=39 Score=30.53 Aligned_cols=30 Identities=13% Similarity=0.210 Sum_probs=21.7
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++|+|+++.|++|++.|...+ |.++.+++.
T Consensus 184 ~~~~d~~~~s~sK~~~~~~g~--G~l~~~~~~ 213 (392)
T 2z9v_A 184 DCKADIYVTGPNKCLGAPPGL--TMMGVSERA 213 (392)
T ss_dssp GGTCSEEEECSSSTTCCCSCC--EEEEECHHH
T ss_pred cccceEEEecCcccccCCCce--eEEEECHHH
Confidence 458999999999987765443 666665543
No 337
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=23.52 E-value=7.9 Score=35.18 Aligned_cols=88 Identities=8% Similarity=-0.016 Sum_probs=46.3
Q ss_pred CCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCC-CCccchhhhhhhhccceeeeeEeecccCCceEEEEE
Q 018198 12 GAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDE-SGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMV 90 (359)
Q Consensus 12 g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~-G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~ 90 (359)
+.++++.|++|.++..+ .-.|.+++.++.+.+ .+....... .+..++...+.....++...-.+ ....+..
T Consensus 220 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~----- 291 (383)
T 3kax_A 220 ARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQ-AFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWL-NEIRFYI----- 291 (383)
T ss_dssp TTEEEEECSHHHHTCGG-GCCEEEECCCHHHHH-HHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHH-HHHHHHH-----
T ss_pred CcEEEEEEChhhccCcc-hhheEEEeCCHHHHH-HHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHH-HHHHHHH-----
Confidence 56699999999997555 344566654444432 222222222 23567777666665555321001 0001233
Q ss_pred EECChhHHHHHHHHHhh-hhce
Q 018198 91 VFGTDRELQQVVKQLQK-LVNV 111 (359)
Q Consensus 91 ~~~~~~~~~~i~~~L~k-~~~v 111 (359)
.+..+.+.+.|++ ++.+
T Consensus 292 ----~~~~~~l~~~l~~~~~~~ 309 (383)
T 3kax_A 292 ----EDNAKFACEYIKDHIPTL 309 (383)
T ss_dssp ----HHHHHHHHHHHHHHCTTC
T ss_pred ----HHHHHHHHHHHHhhCCCc
Confidence 4566677777777 4443
No 338
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=23.24 E-value=76 Score=22.65 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=26.0
Q ss_pred eEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 85 ALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
-++.|.++|+++.++++.+||++-+.-.+|...
T Consensus 40 G~Vei~~eG~~~~i~~f~~~l~~~~p~a~V~~v 72 (91)
T 2fhm_A 40 GRVEILAEGPENALQSFVEAVKNGSPFSKVTDI 72 (91)
T ss_dssp SCEEEEEEECHHHHHHHHHHHHTTCSSSEEEEE
T ss_pred CcEEEEEEeCHHHHHHHHHHHHhCCCccEEEEE
Confidence 368999999999999999999886533555443
No 339
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=23.24 E-value=41 Score=25.00 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=16.5
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+.+.-|++|.+|+++|+.+..
T Consensus 97 ~~~~l~Vvd~~g~~~Giit~~ 117 (133)
T 2ef7_A 97 NIRHLPVVDDKGNLKGIISIR 117 (133)
T ss_dssp TCSEEEEECTTSCEEEEEEHH
T ss_pred CCCEEEEECCCCeEEEEEEHH
Confidence 444569998899999997763
No 340
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=23.12 E-value=7.5 Score=36.00 Aligned_cols=58 Identities=10% Similarity=-0.155 Sum_probs=33.8
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
.+.|+++.|++|.++..+ .-.|.++++.+.. + .+.......+...++...+....-++
T Consensus 234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 291 (412)
T 2x5d_A 234 KDIAVEFFTLSKSYNMAG-WRIGFMVGNPELV-S-ALARIKSYHDYGTFTPLQVAAIAALE 291 (412)
T ss_dssp GGTEEEEEECC-CCSCTT-SCCEEEEECHHHH-H-HHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_pred cCcEEEEecCccccCCcc-cceEEEEcCHHHH-H-HHHHHHhhhccCCCHHHHHHHHHHHh
Confidence 488999999999997555 3346666654432 2 22222233345567777666555554
No 341
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=23.08 E-value=19 Score=34.70 Aligned_cols=29 Identities=17% Similarity=0.115 Sum_probs=21.2
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
.+||+++.|.+|++++.-+. |.+..+++.
T Consensus 305 ~~aDsv~~~~hK~l~~p~g~--g~l~~~~~~ 333 (511)
T 3vp6_A 305 ERANSVTWNPHKMMGVLLQC--SAILVKEKG 333 (511)
T ss_dssp GGCSEEEECTTSTTCCCSCC--EEEEESSTT
T ss_pred ccCCEEEECcccccCCCcCe--EEEEEeCHH
Confidence 36799999999999887553 555555543
No 342
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=23.01 E-value=55 Score=23.89 Aligned_cols=33 Identities=15% Similarity=0.053 Sum_probs=27.2
Q ss_pred eEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 85 ALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
-++.|.++|+++.++++.+||++-|.-.+|...
T Consensus 50 G~Vei~~eG~~~~l~~f~~~l~~gPp~A~V~~v 82 (98)
T 3trg_A 50 GDVELVACGERDSIMILTEWLWEGPPQAAVSNV 82 (98)
T ss_dssp SCEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEE
T ss_pred CEEEEEEEECHHHHHHHHHHHHhCCCCcEEEEE
Confidence 378999999999999999999987765555554
No 343
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=22.76 E-value=9.8 Score=34.75 Aligned_cols=58 Identities=14% Similarity=-0.026 Sum_probs=34.8
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
.+.|+++.|++|.++..+ .-.|.++++.+.. + .+...........++...+.....++
T Consensus 222 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 279 (389)
T 1gd9_A 222 FERTITVNGFSKTFAMTG-WRLGFVAAPSWII-E-RMVKFQMYNATCPVTFIQYAAAKALK 279 (389)
T ss_dssp GGGEEEEEESTTTTTCGG-GCCEEEECCHHHH-H-HHHHHHTTTTCSCCHHHHHHHHHHHT
T ss_pred CCCEEEEecChhhcCCcc-cceEEEEECHHHH-H-HHHHHHhhhccCCCHHHHHHHHHHHh
Confidence 478999999999997555 3346666664332 2 22223333345567776666555544
No 344
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=22.76 E-value=45 Score=29.43 Aligned_cols=30 Identities=10% Similarity=0.111 Sum_probs=21.1
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
++|+|+++.|++|++.|... + |.+..+++.
T Consensus 173 ~~~~d~~~~s~~K~~~~~~g-~-G~~~~~~~~ 202 (352)
T 1iug_A 173 AMGVDAAASGSQKGLMCPPG-L-GFVALSPRA 202 (352)
T ss_dssp GGTCSEEEEESSSTTCCCSC-E-EEEEECHHH
T ss_pred ccCeeEEEecCcccccCCCc-e-eEEEECHHH
Confidence 45899999999997776543 3 555555543
No 345
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=22.44 E-value=51 Score=30.00 Aligned_cols=29 Identities=21% Similarity=0.139 Sum_probs=22.1
Q ss_pred CCcEEEeeecccccCCcceeeeeeeeccccce
Q 018198 12 GAGIVMHSASKFIARHSDVMACGIAVNSERVQ 43 (359)
Q Consensus 12 g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~ 43 (359)
++|+++.|++|.+.|.. +|.++++++.+.
T Consensus 217 ~~di~~~s~sK~l~g~~---~G~~~~~~~~~~ 245 (417)
T 3n0l_A 217 YAHVVSSTTHKTLRGPR---GGIIMTNDEELA 245 (417)
T ss_dssp TCSEEEEESSTTTCSCS---CEEEEESCHHHH
T ss_pred cceEEEeeCccccCCCC---eeEEEECCHHHH
Confidence 68999999999987753 578887754443
No 346
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=22.43 E-value=44 Score=25.26 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=17.3
Q ss_pred CCccceeecCCCeEEEEEeeec
Q 018198 307 GNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+.+--|++|.+|+++|+.+...
T Consensus 100 ~~~~l~Vvd~~g~~~Giit~~d 121 (141)
T 2rih_A 100 NIRHVVVVNKNGELVGVLSIRD 121 (141)
T ss_dssp TCSEEEEECTTSCEEEEEEHHH
T ss_pred CCeEEEEEcCCCcEEEEEEHHH
Confidence 3445699998999999988753
No 347
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=22.31 E-value=42 Score=30.54 Aligned_cols=30 Identities=17% Similarity=0.164 Sum_probs=21.9
Q ss_pred cccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 9 LEFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 9 ~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
-++|+|+++.|.+|++.|... .|.++.+++
T Consensus 185 ~~~~~d~~~~s~~K~l~g~~g--~g~~~~~~~ 214 (416)
T 3isl_A 185 DEWKIDAAIGGTQKCLSVPSG--MAPITYNER 214 (416)
T ss_dssp TTTTCSEEECCSSSTTCCCSS--EEEEEECHH
T ss_pred hhcCCCEEEecCccccCCCCC--eEEEEECHH
Confidence 356899999999998777665 355555544
No 348
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=22.31 E-value=55 Score=25.01 Aligned_cols=60 Identities=18% Similarity=0.124 Sum_probs=37.2
Q ss_pred CCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHhhhhceeeeeec
Q 018198 55 SGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQKLVNVLKVSTK 117 (359)
Q Consensus 55 G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~k~~~v~~v~~~ 117 (359)
-|+-=|.-.|-..+.++.-.--- +...-++.|.++|+++.++++.+||++-|.-.+|...
T Consensus 45 QGVGFR~~v~~~A~~lgL~G~Vr---N~~dG~Vei~~eG~~~~v~~f~~~l~~gPp~A~V~~v 104 (121)
T 2lxf_A 45 QGVFFRKYTKKEADALSLVGYVT---NNEDGSVSGVVQGPKEQVDAFVKYLHKGSPKSVVKKV 104 (121)
T ss_dssp TCCCCHHHHHHHHHHHTCEEEEE---ECTTSCEEEEEEEEHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred CCcCchHHHHHHHHHcCCEEEEE---ECCCCCEEEEEEECHHHHHHHHHHHHhCCCCCEEEEE
Confidence 34444555555555544433322 1122358899999999999999999886654444443
No 349
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=22.10 E-value=51 Score=25.34 Aligned_cols=22 Identities=18% Similarity=0.359 Sum_probs=18.6
Q ss_pred CCccceeecCCCeEEEEEeeec
Q 018198 307 GNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+.+.-|++|.+|+++|+.+...
T Consensus 51 ~~~~~pVvd~~~~~vGivt~~d 72 (152)
T 2uv4_A 51 RVSALPVVDEKGRVVDIYSKFD 72 (152)
T ss_dssp CCSEEEEECTTSBEEEEEEHHH
T ss_pred CCceEeEECCCCcEEEEEeHHH
Confidence 5678899998999999998753
No 350
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=22.04 E-value=67 Score=23.39 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=35.2
Q ss_pred CCccchhhhhhhhccceeeeeEeecccCCceEEEEEEECChhHHHHHHHHHh-hhhceeeeee
Q 018198 55 SGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVFGTDRELQQVVKQLQ-KLVNVLKVST 116 (359)
Q Consensus 55 G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-k~~~v~~v~~ 116 (359)
-|+-=|.-.+-..+.+..-.- + .+...-++.|.++|+++.++++.+||+ +-|.-.+|..
T Consensus 19 QGVGFR~~v~~~A~~lgL~G~-V--~N~~dG~Vei~~eG~~~~v~~f~~~l~~~~p~~a~V~~ 78 (99)
T 2vh7_A 19 QGVFFRKHTQAEGKKLGLVGW-V--QNTDRGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDK 78 (99)
T ss_dssp SSSCHHHHHHHHHHHTTCEEE-E--EECTTSCEEEEEEEEHHHHHHHHHHHHHTCSTTCEEEE
T ss_pred CCcChHHHHHHHHHHcCCcEE-E--EECCCCCEEEEEEcCHHHHHHHHHHHHhcCCCceEEEE
Confidence 344444444444444443332 1 121233689999999999999999997 4454444444
No 351
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=21.97 E-value=1.7e+02 Score=22.58 Aligned_cols=57 Identities=11% Similarity=0.072 Sum_probs=40.3
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEcCCCCCccceEecCCCCCCCCCEEEEEecCCC
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVSVSADLRVGKKIYAIGHPLG 272 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~~ 272 (359)
..+.|.+.+|+.+.+++.++|...++.|=.+..... -.++. -+--|+.|..+.-|..
T Consensus 11 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E~~~----~~lg~--v~IRG~nI~~I~~~d~ 67 (130)
T 1m5q_A 11 REVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAG----EKFNR--VFIMYRYIVHIDSTER 67 (130)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEECTTC----CEEEE--EEECGGGEEEEEECCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccceeEEeeEEEEcC----CEece--EEEeCCeEEEEEcCCc
Confidence 578999999999999999999999999988875321 12221 1223666666665543
No 352
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=21.73 E-value=45 Score=26.48 Aligned_cols=14 Identities=36% Similarity=0.489 Sum_probs=0.0
Q ss_pred eeecCCCeEEEEEe
Q 018198 312 PLLDSSGSLIGVNT 325 (359)
Q Consensus 312 Pl~~~~G~viGi~~ 325 (359)
|++|.+|+++||++
T Consensus 141 pVvd~~g~lvGiit 154 (172)
T 3lhh_A 141 FVVDEYGDLKGLVT 154 (172)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEeCCCCEEEEee
No 353
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=21.66 E-value=45 Score=26.26 Aligned_cols=14 Identities=50% Similarity=0.985 Sum_probs=0.0
Q ss_pred eeecCCCeEEEEEe
Q 018198 312 PLLDSSGSLIGVNT 325 (359)
Q Consensus 312 Pl~~~~G~viGi~~ 325 (359)
|++|.+|+++||++
T Consensus 133 pVvd~~g~~vGiit 146 (180)
T 3sl7_A 133 PVVDADGKLIGILT 146 (180)
T ss_dssp EEECTTCBEEEEEE
T ss_pred EEECCCCeEEEEEE
No 354
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=21.63 E-value=52 Score=25.09 Aligned_cols=22 Identities=32% Similarity=0.333 Sum_probs=18.8
Q ss_pred CCccceeecCCCeEEEEEeeec
Q 018198 307 GNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+.+.-|++|.+|+++|+.+...
T Consensus 47 ~~~~~pVvd~~~~~~Givt~~d 68 (150)
T 3lqn_A 47 GYSAIPVLDPMYKLHGLISTAM 68 (150)
T ss_dssp TCSEEEEECTTCBEEEEEEHHH
T ss_pred CCcEEEEECCCCCEEEEEEHHH
Confidence 5678899999999999998753
No 355
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=21.45 E-value=60 Score=20.92 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=17.3
Q ss_pred CCCccceeecCCCeEEEEEeeec
Q 018198 306 LGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 306 ~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
.+.+.-|++|. |+++|+.+...
T Consensus 21 ~~~~~~pV~d~-~~l~Givt~~d 42 (70)
T 3fio_A 21 NKAGSAVVMEG-DEILGVVTERD 42 (70)
T ss_dssp TTCSEEEEEET-TEEEEEEEHHH
T ss_pred cCCCEEEEEEC-CEEEEEEEHHH
Confidence 35667899986 99999988653
No 356
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=21.42 E-value=55 Score=31.41 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=29.0
Q ss_pred CCccccccccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 2 SPVVLRPLEFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 2 ~p~~~~p~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
..++.+|+++ ||||.-|+.|=+-|-- ||.|.++++
T Consensus 247 ~g~~psP~~~-ADvVTtTTHKTLrGPr---GG~Il~~~~ 281 (490)
T 3ou5_A 247 AKVIPSPFKH-ADIVTTTTHKTLRGAR---SGLIFYRKG 281 (490)
T ss_dssp TTSSCCGGGT-CSEEEEESSSTTCSCS---CEEEEEECS
T ss_pred ccccCCcccc-ceEEeccccccccCCC---ceEEEeccc
Confidence 4678999999 9999999999998874 667777653
No 357
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=21.37 E-value=43 Score=30.25 Aligned_cols=29 Identities=3% Similarity=0.189 Sum_probs=21.0
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccc
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSE 40 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~ 40 (359)
++|+|+++.|++|.+.|-... |.++.+.+
T Consensus 194 ~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~ 222 (393)
T 2huf_A 194 RWEIDAMYTGSQKVLGAPPGI--TPVSFSHR 222 (393)
T ss_dssp TTTCSEEECCSSSTTCCCSSC--EEEEECHH
T ss_pred hcCccEEEECCCcccccCCCe--EEEEECHH
Confidence 468999999999987764443 66666543
No 358
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=21.36 E-value=10 Score=33.68 Aligned_cols=30 Identities=20% Similarity=-0.016 Sum_probs=20.4
Q ss_pred cCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 11 FGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 11 ~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
.+.++++.|+||.++..+ .-.|.++.+.+.
T Consensus 187 ~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~ 216 (337)
T 3p1t_A 187 GENELVFRSFSKSYGLAG-LRLGALFGPSEL 216 (337)
T ss_dssp BTTEEEEEESSSTTCCTT-TCCEEEECCHHH
T ss_pred CCCEEEEeeCchhccCcc-hheEEEEeCHHH
Confidence 367899999999995343 334566655543
No 359
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=20.92 E-value=79 Score=23.98 Aligned_cols=32 Identities=13% Similarity=0.289 Sum_probs=28.3
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCEEEEEEc
Q 018198 210 STVKVSFSDQSTFYAQVVGHDQVNDLAVLHID 241 (359)
Q Consensus 210 ~~~~v~~~~g~~~~~~v~~~d~~~DlAll~v~ 241 (359)
..+.|.+.+|+.+.+++.++|...++.|=.+.
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 46899999999999999999999999886554
No 360
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=20.80 E-value=2.6e+02 Score=21.69 Aligned_cols=66 Identities=12% Similarity=0.251 Sum_probs=52.7
Q ss_pred EEEeecCCCCccchhhhhhhhccceeeeeEeecccCCceEEEEEEE-CChhHHHHHHHHHhhhhceeeeee
Q 018198 47 ISVFVGDESGILSRIDGVFTRRNCNIESLGVIGLNKDRALFTMVVF-GTDRELQQVVKQLQKLVNVLKVST 116 (359)
Q Consensus 47 l~~~~~~~G~~lsp~~a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~-~~~~~~~~i~~~L~k~~~v~~v~~ 116 (359)
+.....+-.|.++-+...+...++|+.++-+... + .+.+.+. .+.+....+..+|+++.++..+..
T Consensus 3 ~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~--g--~i~~~~~~~~~~~~~~L~~~l~~i~~~~~~~~ 69 (190)
T 2jhe_A 3 LEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI--G--RIYLNFAELEFESFSSLMAEIRRIAGVTDVRT 69 (190)
T ss_dssp EEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT--T--EEEEEECCCCHHHHHHHHHHHHHSTTEEEEEE
T ss_pred EEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC--C--EEEEEEEeCCHHHHHHHHHHHHcCCCeeEEEE
Confidence 4567788899999999999999999999998322 2 2555555 556789999999999999888765
No 361
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=20.77 E-value=2.2e+02 Score=19.86 Aligned_cols=64 Identities=13% Similarity=0.176 Sum_probs=40.9
Q ss_pred EEEeecCCCCccchhh----hhhhhccceeeeeEeecccCCceEEEEEEECC-----hhHHHHHHHHHhhhhceeeeee
Q 018198 47 ISVFVGDESGILSRID----GVFTRRNCNIESLGVIGLNKDRALFTMVVFGT-----DRELQQVVKQLQKLVNVLKVST 116 (359)
Q Consensus 47 l~~~~~~~G~~lsp~~----a~l~~RG~~tl~lr~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~L~k~~~v~~v~~ 116 (359)
....+....|++.|.- .-+...||+...+|. ..++++.++++ .+.++.+++.|--.|-+....+
T Consensus 5 ~~V~V~lK~gVlDpqG~av~~al~~LG~~v~~VR~------gK~~~l~~~~~~~~~a~~~v~~~~~~LLaNpVie~~~~ 77 (85)
T 1gtd_A 5 VEVRIRLKKGMLNPEAATIERALALLGYEVEDTDT------TDVITFTMDEDSLEAVEREVEDMCQRLLCNPVIHDYDV 77 (85)
T ss_dssp EEEEEEECTTSCCHHHHHHHHHHHHHTCCCEEEEE------EEEEEEEECCSCHHHHHHHHHHHHHHTTCCTTTEEEEE
T ss_pred EEEEEEECCCCcCcHHHHHHHHHHHcCCChheEEE------EEEEEEEecCCCHHHHHHHHHHHHHHhcCCCcceEEEE
Confidence 3456666799999976 234667787778887 33577777765 2456667777655555544433
No 362
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=20.76 E-value=52 Score=29.85 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=22.4
Q ss_pred cccCCcEEEeeecccccCCcceeeeeeeecccc
Q 018198 9 LEFGAGIVMHSASKFIARHSDVMACGIAVNSER 41 (359)
Q Consensus 9 ~~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~ 41 (359)
-++|+|+++.|.+|++.|... .|.++.+++.
T Consensus 187 ~~~~~d~~~~s~~K~l~~~~g--~g~~~~~~~~ 217 (411)
T 3nnk_A 187 DVWGLDAVSAGMQKCLGGPSG--TSPITLSARM 217 (411)
T ss_dssp TTTTCSEEECCSTTTTCCCSS--EEEEEECHHH
T ss_pred hccCCcEEEecCccccCCCCc--eEEEEECHHH
Confidence 356899999999998777654 3566655543
No 363
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=20.63 E-value=56 Score=25.11 Aligned_cols=24 Identities=8% Similarity=0.232 Sum_probs=18.9
Q ss_pred CCCCccceeecCCCeEEEEEeeec
Q 018198 305 NLGNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 305 ~~G~SGgPl~~~~G~viGi~~~~~ 328 (359)
..+.+.-|++|.+|+++|+.+...
T Consensus 45 ~~~~~~~~Vvd~~~~~~Giit~~d 68 (156)
T 3ctu_A 45 QMTYTRVPVVTDEKQFVGTIGLRD 68 (156)
T ss_dssp TCSSSEEEEECC-CBEEEEEEHHH
T ss_pred HCCCceEeEECCCCEEEEEEcHHH
Confidence 346788999999999999988653
No 364
>3h09_A IGA1 protease, immunoglobulin A1 protease; serine protease, beta helix, hydrolase, M protease, secreted, transmembrane, virulence; 1.75A {Haemophilus influenzae}
Probab=20.50 E-value=58 Score=33.87 Aligned_cols=47 Identities=23% Similarity=0.341 Sum_probs=28.0
Q ss_pred CCCCCccceee--cC---CCeEEEEEeeecCC-CcceeEE-EEehHHHHHHHHH
Q 018198 304 VNLGNSGGPLL--DS---SGSLIGVNTFITSG-AFSGIGF-ALPIDTVRGIVDQ 350 (359)
Q Consensus 304 ~~~G~SGgPl~--~~---~G~viGi~~~~~~~-~~~~~~~-aip~~~i~~~l~~ 350 (359)
..+|+||+||| |. +..++|+....... ......| .+|-+.+.+.+++
T Consensus 258 ~~~GDSGSPlF~yD~~~~kWvl~Gvl~~~~g~~~~~~~~w~i~~~~f~~~i~~~ 311 (989)
T 3h09_A 258 AVLGDSGSPLFVYDREKGKWLFLGSYDFWAGYNKKSWQEWNIYKPEFAKTVLDK 311 (989)
T ss_dssp CCTTCTTCEEEEEETTTTEEEEEEEEEEECHHHHCCEEEEEECCHHHHHHHHHH
T ss_pred CCcCCCCCccceeecccceEEEEEEeecccccCCcccceeEeccHHHHHhHhhc
Confidence 45799999998 32 24599998764311 1111123 4566666666654
No 365
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=20.43 E-value=11 Score=35.37 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=34.8
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
..+.||++.|+||.++..+-- .|.+++.++.+.+ .+..+........+++..+...+.++
T Consensus 239 ~~~~~i~~~S~SK~~g~~G~R-iG~~~~~~~~l~~-~l~~~~~~~~~~~~~~~q~a~~~~L~ 298 (427)
T 2hox_A 239 KADEDILLFTMSKFTGHSGSR-FGWALIKDESVYN-NLLNYMTKNTEGTPRETQLRSLKVLK 298 (427)
T ss_dssp CBCCSEEEEEHHHHTSCGGGC-CEEEEECCHHHHH-HHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred CCCceEEEEeChhcCCCCCce-EEEEEECCHHHHH-HHHHHHHhcCCCCCHHHHHHHHHHhh
Confidence 368899999999998756544 4566664333432 23333333334556665555544443
No 366
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=20.42 E-value=56 Score=25.41 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=18.5
Q ss_pred CCccceeecCCCeEEEEEeeec
Q 018198 307 GNSGGPLLDSSGSLIGVNTFIT 328 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~~ 328 (359)
+.++-|++|.+|+++|+.+...
T Consensus 35 ~~~~~pVvd~~~~lvGivt~~d 56 (160)
T 2o16_A 35 DIRHVPIVDANKKLLGIVSQRD 56 (160)
T ss_dssp TCSEEEEECTTCBEEEEEEHHH
T ss_pred CCCEEEEEcCCCcEEEEEeHHH
Confidence 5678899998999999998653
No 367
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=20.38 E-value=45 Score=26.67 Aligned_cols=21 Identities=24% Similarity=0.145 Sum_probs=17.0
Q ss_pred CCccceeecCCCeEEEEEeee
Q 018198 307 GNSGGPLLDSSGSLIGVNTFI 327 (359)
Q Consensus 307 G~SGgPl~~~~G~viGi~~~~ 327 (359)
+..--|++|.+|+++||++..
T Consensus 129 ~~~~~~Vvde~g~lvGiIT~~ 149 (173)
T 3ocm_A 129 RGQLVLVADEFGAIEGLVTPI 149 (173)
T ss_dssp TTCCEEEECTTCCEEEEECHH
T ss_pred CCeEEEEEeCCCCEEEEEeHH
Confidence 444679999899999998875
No 368
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=20.30 E-value=19 Score=32.51 Aligned_cols=59 Identities=17% Similarity=0.014 Sum_probs=37.2
Q ss_pred ccCCcEEEeeecccccCCcceeeeeeeeccccceeeEEEEeecCCCCccchhhhhhhhccce
Q 018198 10 EFGAGIVMHSASKFIARHSDVMACGIAVNSERVQRHTISVFVGDESGILSRIDGVFTRRNCN 71 (359)
Q Consensus 10 ~~g~d~~~~s~tK~~~gh~d~~~g~~~~~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~RG~~ 71 (359)
..+.++++.|++|.++..+ .-.|.++.+.+.. + .+.......+...++...+.....++
T Consensus 219 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~~~l~ 277 (376)
T 3ezs_A 219 AFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLL-E-KYKAFRAYLGYTSANAIQKASEAAWL 277 (376)
T ss_dssp TCTTEEEEEESTTTTTCGG-GCCEEEEECHHHH-H-HHHHHHTTTCCCCCHHHHHHHHHHHH
T ss_pred ccCcEEEEecchhccCCcc-ceeEEEeeCHHHH-H-HHHHHHhhhcCCCChHHHHHHHHHHh
Confidence 5789999999999996444 4445666554332 2 23333344466677777776666655
Done!