Query 018199
Match_columns 359
No_of_seqs 241 out of 1243
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 11:29:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 1.6E-59 5.5E-64 437.4 27.5 291 43-359 5-297 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 1.4E-54 4.9E-59 409.9 25.7 290 46-359 24-315 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 6.2E-54 2.1E-58 404.5 22.2 287 44-359 27-316 (332)
4 2an1_A Putative kinase; struct 99.8 5.1E-21 1.7E-25 176.7 7.3 250 46-358 5-270 (292)
5 1yt5_A Inorganic polyphosphate 99.7 4.9E-18 1.7E-22 153.7 8.4 229 47-358 1-236 (258)
6 1u0t_A Inorganic polyphosphate 99.7 1.3E-17 4.3E-22 154.8 9.2 247 46-358 4-282 (307)
7 2i2c_A Probable inorganic poly 99.6 1.1E-15 3.8E-20 139.3 11.9 234 47-358 1-246 (272)
8 3afo_A NADH kinase POS5; alpha 98.4 2.8E-07 9.7E-12 87.2 6.4 114 44-179 39-174 (388)
9 1z0s_A Probable inorganic poly 97.4 0.00055 1.9E-08 61.6 8.5 93 47-175 30-122 (278)
10 3pfn_A NAD kinase; structural 97.1 0.0021 7.3E-08 60.0 10.3 109 44-179 36-167 (365)
11 1o2d_A Alcohol dehydrogenase, 87.9 2.5 8.6E-05 39.3 9.7 98 47-150 41-148 (371)
12 1sg6_A Pentafunctional AROM po 87.8 0.98 3.3E-05 42.5 6.9 97 46-157 36-148 (393)
13 1oj7_A Hypothetical oxidoreduc 86.8 3.3 0.00011 39.0 9.9 99 47-153 51-164 (408)
14 3hl0_A Maleylacetate reductase 85.8 1.6 5.4E-05 40.4 7.0 82 46-150 34-119 (353)
15 3jzd_A Iron-containing alcohol 85.8 1.3 4.4E-05 41.1 6.3 82 46-150 36-121 (358)
16 3okf_A 3-dehydroquinate syntha 85.5 5.2 0.00018 37.4 10.4 88 45-150 61-157 (390)
17 1jq5_A Glycerol dehydrogenase; 85.2 2.1 7.2E-05 39.7 7.6 84 47-150 32-118 (370)
18 3bfj_A 1,3-propanediol oxidore 85.2 4.5 0.00016 37.7 9.9 100 46-150 33-142 (387)
19 3uhj_A Probable glycerol dehyd 84.2 1.9 6.5E-05 40.4 6.8 85 47-150 53-138 (387)
20 2gru_A 2-deoxy-scyllo-inosose 84.0 7 0.00024 36.2 10.6 88 46-150 34-128 (368)
21 1vlj_A NADH-dependent butanol 83.8 4.7 0.00016 37.9 9.4 98 47-150 44-151 (407)
22 4grd_A N5-CAIR mutase, phospho 83.1 18 0.0006 29.6 11.7 78 44-126 10-89 (173)
23 3ox4_A Alcohol dehydrogenase 2 82.9 2.8 9.6E-05 39.1 7.4 98 46-150 31-138 (383)
24 3ce9_A Glycerol dehydrogenase; 82.7 2.1 7.2E-05 39.5 6.4 83 47-150 35-120 (354)
25 3qbe_A 3-dehydroquinate syntha 82.4 8.6 0.0003 35.6 10.4 85 47-150 44-137 (368)
26 1rrm_A Lactaldehyde reductase; 80.4 4.7 0.00016 37.5 8.0 74 46-126 31-108 (386)
27 3clh_A 3-dehydroquinate syntha 79.8 2.8 9.5E-05 38.5 6.1 88 46-151 26-120 (343)
28 3lp6_A Phosphoribosylaminoimid 78.7 25 0.00087 28.7 11.4 74 47-125 8-83 (174)
29 3ors_A N5-carboxyaminoimidazol 78.0 26 0.00088 28.3 10.5 74 47-125 4-79 (163)
30 1pfk_A Phosphofructokinase; tr 76.9 2.1 7.1E-05 39.0 4.1 50 94-157 83-132 (320)
31 1ta9_A Glycerol dehydrogenase; 76.0 4.3 0.00015 38.8 6.3 83 47-150 92-177 (450)
32 1xah_A Sadhqs, 3-dehydroquinat 73.2 6.6 0.00023 36.1 6.7 86 47-150 32-124 (354)
33 1ujn_A Dehydroquinate synthase 70.7 15 0.0005 33.7 8.4 84 46-150 28-118 (348)
34 2hig_A 6-phospho-1-fructokinas 70.5 3.5 0.00012 39.7 4.1 55 95-157 179-233 (487)
35 3oow_A Phosphoribosylaminoimid 69.3 44 0.0015 27.0 10.4 86 48-153 7-94 (166)
36 1zxx_A 6-phosphofructokinase; 69.2 4.9 0.00017 36.5 4.7 51 93-157 81-131 (319)
37 3kuu_A Phosphoribosylaminoimid 68.7 46 0.0016 27.1 10.3 73 48-125 14-88 (174)
38 1u11_A PURE (N5-carboxyaminoim 67.8 50 0.0017 27.1 10.7 74 47-125 22-97 (182)
39 3trh_A Phosphoribosylaminoimid 67.3 49 0.0017 26.8 10.4 73 48-125 8-82 (169)
40 1o4v_A Phosphoribosylaminoimid 66.2 40 0.0014 27.7 9.0 75 63-153 26-102 (183)
41 1xmp_A PURE, phosphoribosylami 66.2 36 0.0012 27.7 8.7 73 48-125 13-87 (170)
42 4a3s_A 6-phosphofructokinase; 61.8 9.7 0.00033 34.6 5.1 49 95-157 83-131 (319)
43 3iv7_A Alcohol dehydrogenase I 59.2 11 0.00039 34.8 5.2 45 93-150 76-120 (364)
44 1kq3_A Glycerol dehydrogenase; 56.9 3 0.0001 38.8 0.9 33 105-150 94-126 (376)
45 4b4k_A N5-carboxyaminoimidazol 55.9 83 0.0028 25.7 10.4 72 49-125 25-98 (181)
46 3hno_A Pyrophosphate-dependent 53.3 14 0.00049 34.8 4.9 59 91-157 90-148 (419)
47 2f48_A Diphosphate--fructose-6 52.2 11 0.00038 36.9 4.0 56 94-157 155-210 (555)
48 2h31_A Multifunctional protein 50.8 1.5E+02 0.005 27.9 11.3 75 47-126 266-343 (425)
49 3tb6_A Arabinose metabolism tr 50.6 1.2E+02 0.004 25.8 11.1 77 46-126 15-96 (298)
50 3rg8_A Phosphoribosylaminoimid 50.6 96 0.0033 24.8 9.2 73 48-125 4-79 (159)
51 3rfq_A Pterin-4-alpha-carbinol 50.2 31 0.0011 28.4 6.0 71 43-116 27-100 (185)
52 3jy6_A Transcriptional regulat 49.9 1.2E+02 0.004 25.7 10.9 88 43-150 4-93 (276)
53 2fep_A Catabolite control prot 49.6 1.2E+02 0.0041 25.9 10.3 78 43-126 13-92 (289)
54 3g1w_A Sugar ABC transporter; 47.9 1.2E+02 0.0043 25.9 10.2 89 46-151 4-95 (305)
55 1qtn_A Caspase-8; apoptosis, d 47.8 1.1E+02 0.0036 24.6 9.4 58 43-103 19-91 (164)
56 3lop_A Substrate binding perip 47.4 1.1E+02 0.0036 27.2 9.9 80 45-128 140-219 (364)
57 1zl0_A Hypothetical protein PA 47.0 38 0.0013 30.4 6.5 66 49-119 19-95 (311)
58 2fqx_A Membrane lipoprotein TM 46.9 98 0.0033 27.3 9.4 67 46-115 4-72 (318)
59 3hbm_A UDP-sugar hydrolase; PS 46.7 57 0.002 28.7 7.6 28 105-150 225-252 (282)
60 3opy_A 6-phosphofructo-1-kinas 45.8 15 0.00052 38.2 4.0 61 96-157 295-365 (989)
61 3opy_B 6-phosphofructo-1-kinas 44.9 15 0.0005 38.3 3.7 61 97-158 268-338 (941)
62 3lkb_A Probable branched-chain 44.7 77 0.0026 28.5 8.5 78 45-128 142-221 (392)
63 2iz6_A Molybdenum cofactor car 44.4 52 0.0018 26.8 6.4 45 94-151 34-79 (176)
64 3s99_A Basic membrane lipoprot 43.9 1.2E+02 0.004 27.7 9.5 94 41-149 21-117 (356)
65 3gbv_A Putative LACI-family tr 43.9 76 0.0026 27.2 8.0 79 44-126 6-91 (304)
66 2fn9_A Ribose ABC transporter, 43.8 1.5E+02 0.0051 25.1 10.0 47 80-126 32-80 (290)
67 4eys_A MCCC family protein; MC 42.9 67 0.0023 29.2 7.6 73 46-121 4-90 (346)
68 1t35_A Hypothetical protein YV 42.9 49 0.0017 27.3 6.1 45 93-151 21-67 (191)
69 2pju_A Propionate catabolism o 42.8 1.4E+02 0.0048 25.3 9.2 66 46-125 106-171 (225)
70 3rpe_A MDAB, modulator of drug 42.6 68 0.0023 27.1 7.1 15 42-56 21-36 (218)
71 3sbx_A Putative uncharacterize 42.3 47 0.0016 27.4 5.9 45 94-151 33-78 (189)
72 3ndc_A Precorrin-4 C(11)-methy 42.2 84 0.0029 27.2 7.9 57 95-164 66-127 (264)
73 1mkz_A Molybdenum cofactor bio 42.1 1.3E+02 0.0045 24.0 9.8 31 86-116 49-80 (172)
74 3lft_A Uncharacterized protein 41.8 1.2E+02 0.004 26.2 8.9 76 45-127 132-207 (295)
75 1pyo_A Caspase-2; apoptosis, c 41.4 1.4E+02 0.0047 24.0 9.5 65 43-110 29-105 (167)
76 4h1h_A LMO1638 protein; MCCF-l 40.6 61 0.0021 29.2 6.9 68 49-119 14-93 (327)
77 1t35_A Hypothetical protein YV 39.9 38 0.0013 28.0 5.0 38 105-150 97-135 (191)
78 3o8l_A 6-phosphofructokinase, 39.6 33 0.0011 34.9 5.3 62 95-157 99-170 (762)
79 1ydh_A AT5G11950; structural g 39.2 54 0.0019 27.7 5.9 43 94-149 30-73 (216)
80 1y5e_A Molybdenum cofactor bio 38.8 1.4E+02 0.0047 23.8 8.2 31 86-116 52-83 (169)
81 2iks_A DNA-binding transcripti 38.7 1.6E+02 0.0054 25.1 9.3 76 45-125 19-96 (293)
82 3d8u_A PURR transcriptional re 38.5 1.2E+02 0.0042 25.4 8.5 74 46-125 3-78 (275)
83 3k9c_A Transcriptional regulat 38.1 94 0.0032 26.6 7.7 75 44-125 10-85 (289)
84 4eyg_A Twin-arginine transloca 38.1 1.7E+02 0.0059 25.7 9.7 79 45-129 138-218 (368)
85 3qua_A Putative uncharacterize 37.9 59 0.002 27.1 5.8 45 94-151 42-87 (199)
86 2q5c_A NTRC family transcripti 37.8 51 0.0017 27.3 5.5 66 46-125 94-159 (196)
87 3h75_A Periplasmic sugar-bindi 36.9 2.2E+02 0.0074 25.0 11.2 89 47-152 4-96 (350)
88 3l6u_A ABC-type sugar transpor 36.7 1.9E+02 0.0066 24.4 10.1 78 44-126 6-86 (293)
89 3m9w_A D-xylose-binding peripl 36.7 2E+02 0.007 24.6 11.7 88 47-151 3-92 (313)
90 3ipc_A ABC transporter, substr 36.6 1.4E+02 0.0048 26.2 8.8 80 45-128 137-216 (356)
91 4e16_A Precorrin-4 C(11)-methy 36.6 77 0.0026 27.2 6.7 58 94-164 66-128 (253)
92 2rgy_A Transcriptional regulat 36.4 2E+02 0.0068 24.4 9.7 76 45-126 7-87 (290)
93 3o8o_A 6-phosphofructokinase s 36.1 36 0.0012 34.8 4.9 61 97-158 91-161 (787)
94 3opy_A 6-phosphofructo-1-kinas 35.6 36 0.0012 35.6 4.8 58 93-157 676-733 (989)
95 2pjk_A 178AA long hypothetical 35.4 70 0.0024 26.0 5.9 56 69-125 45-106 (178)
96 1nw9_B Caspase 9, apoptosis-re 35.0 2.2E+02 0.0077 24.6 9.8 109 43-160 17-157 (277)
97 3o8l_A 6-phosphofructokinase, 35.0 44 0.0015 34.0 5.4 59 93-158 477-535 (762)
98 3rot_A ABC sugar transporter, 34.9 2.1E+02 0.0072 24.3 9.5 47 80-126 33-83 (297)
99 2rjo_A Twin-arginine transloca 34.8 2.1E+02 0.0071 24.9 9.6 77 44-125 3-84 (332)
100 2a33_A Hypothetical protein; s 34.7 71 0.0024 26.9 5.9 45 94-151 34-79 (215)
101 3o8o_B 6-phosphofructokinase s 34.6 48 0.0016 33.8 5.5 61 97-158 90-160 (766)
102 3egc_A Putative ribose operon 34.6 1.9E+02 0.0064 24.5 9.1 89 44-151 6-96 (291)
103 3s5p_A Ribose 5-phosphate isom 34.4 1.6E+02 0.0056 23.7 7.6 63 38-108 13-81 (166)
104 3pzy_A MOG; ssgcid, seattle st 34.1 59 0.002 26.0 5.1 38 87-125 49-91 (164)
105 3qk7_A Transcriptional regulat 33.8 1.4E+02 0.0047 25.6 8.1 81 44-126 4-85 (294)
106 2hi1_A 4-hydroxythreonine-4-ph 33.8 34 0.0012 31.1 3.9 60 48-112 207-269 (330)
107 3snr_A Extracellular ligand-bi 33.7 1.1E+02 0.0036 27.0 7.4 78 45-128 134-213 (362)
108 1jlj_A Gephyrin; globular alph 33.5 85 0.0029 25.8 6.1 31 86-116 58-89 (189)
109 3eaf_A ABC transporter, substr 33.0 1.1E+02 0.0039 27.4 7.7 78 45-127 140-221 (391)
110 3h11_B Caspase-8; cell death, 32.9 2.4E+02 0.0081 24.5 9.3 109 43-160 13-153 (271)
111 2is8_A Molybdopterin biosynthe 32.7 90 0.0031 24.8 6.1 31 86-116 42-73 (164)
112 3l49_A ABC sugar (ribose) tran 32.5 2.2E+02 0.0077 23.9 11.0 78 44-126 3-83 (291)
113 2x9a_A Attachment protein G3P; 32.2 15 0.00053 24.3 1.0 12 107-118 39-50 (65)
114 2g2c_A Putative molybdenum cof 32.0 76 0.0026 25.4 5.5 31 86-116 50-80 (167)
115 3opy_B 6-phosphofructo-1-kinas 31.6 44 0.0015 34.8 4.8 58 94-158 651-708 (941)
116 3tla_A MCCF; serine protease, 31.6 64 0.0022 29.7 5.5 69 48-119 44-124 (371)
117 1rcu_A Conserved hypothetical 31.3 43 0.0015 27.9 3.9 33 103-149 116-149 (195)
118 3p45_A Caspase-6; protease, hu 31.2 2.1E+02 0.0073 23.2 8.6 58 43-103 40-105 (179)
119 3td9_A Branched chain amino ac 31.0 1.6E+02 0.0053 26.1 8.1 79 45-128 148-227 (366)
120 3o74_A Fructose transport syst 30.9 2E+02 0.007 23.8 8.6 76 46-126 2-79 (272)
121 3f6r_A Flavodoxin; FMN binding 30.8 1.7E+02 0.0059 22.1 7.4 89 46-152 1-95 (148)
122 2x7x_A Sensor protein; transfe 30.7 2.6E+02 0.009 24.1 9.9 76 45-126 5-84 (325)
123 2vk2_A YTFQ, ABC transporter p 30.7 2.5E+02 0.0086 23.9 9.6 47 80-126 32-80 (306)
124 2dko_A Caspase-3; low barrier 30.1 2E+02 0.0067 22.5 8.1 59 43-104 12-78 (146)
125 2qh8_A Uncharacterized protein 30.0 1.7E+02 0.006 25.1 8.1 75 45-126 139-213 (302)
126 3rf7_A Iron-containing alcohol 30.0 72 0.0024 29.4 5.6 94 46-150 53-159 (375)
127 1s4d_A Uroporphyrin-III C-meth 30.0 1.6E+02 0.0056 25.5 7.8 57 95-164 82-143 (280)
128 3k4h_A Putative transcriptiona 29.9 2.5E+02 0.0085 23.6 9.2 81 44-126 6-89 (292)
129 3r7f_A Aspartate carbamoyltran 29.9 1.5E+02 0.0052 26.4 7.5 99 51-160 66-165 (304)
130 4evq_A Putative ABC transporte 29.8 1.7E+02 0.0058 25.8 8.2 78 45-128 150-229 (375)
131 1m72_A Caspase-1; caspase, cys 29.8 1.7E+02 0.0058 25.5 7.8 59 43-104 28-93 (272)
132 2nn3_C Caspase-1; cysteine pro 29.5 1.9E+02 0.0065 25.8 8.2 108 43-159 56-186 (310)
133 3sr3_A Microcin immunity prote 29.0 74 0.0025 28.8 5.4 68 49-119 15-94 (336)
134 2iz6_A Molybdenum cofactor car 28.8 35 0.0012 27.9 2.9 54 106-174 108-169 (176)
135 4e5s_A MCCFLIKE protein (BA_56 28.8 97 0.0033 28.0 6.2 69 48-119 13-93 (331)
136 3o8o_A 6-phosphofructokinase s 28.5 61 0.0021 33.1 5.1 58 93-157 471-528 (787)
137 8abp_A L-arabinose-binding pro 28.4 2.7E+02 0.0093 23.6 11.1 57 80-149 32-89 (306)
138 4ehd_A Caspase-3; caspase, apo 28.3 1.9E+02 0.0064 25.3 7.8 110 42-160 39-172 (277)
139 3kke_A LACI family transcripti 28.3 2.8E+02 0.0095 23.6 9.6 78 45-126 14-92 (303)
140 3miz_A Putative transcriptiona 27.9 2.7E+02 0.0092 23.6 9.0 71 44-117 11-82 (301)
141 1usg_A Leucine-specific bindin 27.8 2.5E+02 0.0085 24.3 8.9 78 45-128 137-216 (346)
142 2hqb_A Transcriptional activat 27.8 1.6E+02 0.0055 25.5 7.4 66 46-114 5-72 (296)
143 3hut_A Putative branched-chain 27.7 2E+02 0.0068 25.2 8.2 77 45-128 138-217 (358)
144 1yxo_A 4-hydroxythreonine-4-ph 27.5 33 0.0011 31.1 2.7 60 48-112 201-263 (328)
145 3kbq_A Protein TA0487; structu 27.3 1.2E+02 0.0043 24.4 6.0 46 69-116 28-73 (172)
146 3h5t_A Transcriptional regulat 26.9 2.1E+02 0.0071 25.4 8.2 79 45-125 67-147 (366)
147 2pbq_A Molybdenum cofactor bio 26.8 1.4E+02 0.0047 24.1 6.3 31 86-116 48-79 (178)
148 1weh_A Conserved hypothetical 25.8 86 0.0029 25.3 4.8 45 93-150 21-65 (171)
149 3o1i_D Periplasmic protein TOR 25.8 1.6E+02 0.0053 25.1 7.0 77 44-125 3-84 (304)
150 3g23_A Peptidase U61, LD-carbo 25.8 1.1E+02 0.0038 26.8 5.8 74 48-125 4-88 (274)
151 1rcu_A Conserved hypothetical 25.7 86 0.0029 26.0 4.8 45 93-150 46-90 (195)
152 2ql9_A Caspase-7; cysteine pro 25.7 2.6E+02 0.0088 22.5 7.6 58 43-103 40-105 (173)
153 3clk_A Transcription regulator 25.7 2.3E+02 0.0079 23.9 8.1 29 96-125 56-84 (290)
154 1byk_A Protein (trehalose oper 25.5 2.6E+02 0.009 22.9 8.3 66 46-116 2-69 (255)
155 2fvy_A D-galactose-binding per 25.4 3.1E+02 0.011 23.2 10.6 75 47-126 3-81 (309)
156 1nbw_B Glycerol dehydratase re 25.2 2.2E+02 0.0075 21.4 7.2 67 46-118 5-72 (117)
157 2hsg_A Glucose-resistance amyl 24.9 2.9E+02 0.01 23.9 8.8 76 45-125 59-135 (332)
158 3o8o_B 6-phosphofructokinase s 24.8 50 0.0017 33.7 3.7 57 94-157 473-529 (766)
159 3hcw_A Maltose operon transcri 24.7 1.5E+02 0.0052 25.3 6.7 83 43-126 4-88 (295)
160 2qip_A Protein of unknown func 24.6 1.1E+02 0.0037 24.3 5.2 24 104-127 107-130 (165)
161 1cbf_A Cobalt-precorrin-4 tran 24.5 3.4E+02 0.012 23.5 8.9 56 96-164 84-144 (285)
162 3bbl_A Regulatory protein of L 24.5 2.1E+02 0.0071 24.2 7.5 30 95-125 54-83 (287)
163 3qvl_A Putative hydantoin race 24.5 2.3E+02 0.0078 24.1 7.6 24 100-124 64-88 (245)
164 1di0_A Lumazine synthase; tran 24.1 2.5E+02 0.0086 22.3 7.1 101 44-152 8-118 (158)
165 3e3m_A Transcriptional regulat 23.8 3.7E+02 0.013 23.5 10.6 75 46-126 70-146 (355)
166 3lxy_A 4-hydroxythreonine-4-ph 23.5 33 0.0011 31.2 1.9 61 47-112 205-268 (334)
167 3kjx_A Transcriptional regulat 23.2 3.7E+02 0.013 23.4 11.9 76 45-126 67-144 (344)
168 2h54_A Caspase-1; allosteric s 23.0 3E+02 0.01 22.2 8.8 53 47-102 43-100 (178)
169 1uuy_A CNX1, molybdopterin bio 23.0 1.7E+02 0.0058 23.2 6.1 40 86-125 51-96 (167)
170 3bil_A Probable LACI-family tr 23.0 3.3E+02 0.011 23.8 8.8 75 46-126 66-142 (348)
171 4ekn_B Aspartate carbamoyltran 22.4 2.9E+02 0.01 24.5 8.0 98 50-159 69-168 (306)
172 2ybo_A Methyltransferase; SUMT 22.2 2.5E+02 0.0084 24.6 7.5 53 99-164 96-153 (294)
173 3brq_A HTH-type transcriptiona 22.1 3.5E+02 0.012 22.6 11.2 77 45-125 18-96 (296)
174 2e0n_A Precorrin-2 C20-methylt 21.9 1.8E+02 0.0063 24.7 6.5 56 96-164 87-147 (259)
175 2lnd_A De novo designed protei 21.8 2.1E+02 0.0071 19.9 7.0 51 45-103 50-100 (112)
176 1tjy_A Sugar transport protein 21.6 3.9E+02 0.013 23.0 9.7 75 47-126 4-82 (316)
177 3uug_A Multiple sugar-binding 21.6 3.8E+02 0.013 22.9 11.0 87 46-150 3-92 (330)
178 2iuf_A Catalase; oxidoreductas 21.5 1.3E+02 0.0045 30.2 5.9 100 44-163 527-651 (688)
179 3c3k_A Alanine racemase; struc 21.5 3.6E+02 0.012 22.6 9.4 76 44-125 6-83 (285)
180 3brs_A Periplasmic binding pro 21.4 3.6E+02 0.012 22.5 9.3 78 45-125 4-86 (289)
181 3od5_A Caspase-6; caspase doma 21.3 4E+02 0.014 23.1 9.0 110 43-161 17-150 (278)
182 2h3h_A Sugar ABC transporter, 21.2 3.9E+02 0.013 22.8 9.7 34 93-126 45-79 (313)
183 3ksm_A ABC-type sugar transpor 21.0 3.5E+02 0.012 22.3 9.0 44 94-150 47-92 (276)
184 3i45_A Twin-arginine transloca 20.9 4.3E+02 0.015 23.3 9.2 80 45-128 141-222 (387)
185 3s2u_A UDP-N-acetylglucosamine 20.9 4.1E+02 0.014 23.6 9.0 19 105-123 252-270 (365)
186 3sg0_A Extracellular ligand-bi 20.9 2.6E+02 0.0088 24.6 7.6 80 45-128 158-237 (386)
187 2j32_A Caspase-3; Pro-caspase3 20.8 3.3E+02 0.011 23.2 7.9 109 43-160 12-144 (250)
188 1ve2_A Uroporphyrin-III C-meth 20.4 2.6E+02 0.0087 23.3 7.0 54 98-164 71-129 (235)
189 3nut_A Precorrin-3 methylase; 20.3 2E+02 0.0067 24.5 6.3 57 99-164 72-133 (251)
190 1di6_A MOGA, molybdenum cofact 20.3 2.1E+02 0.0073 23.4 6.3 31 86-116 46-77 (195)
191 3e4c_A Caspase-1; zymogen, inf 20.2 4.3E+02 0.015 23.3 8.6 102 47-157 60-189 (302)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=1.6e-59 Score=437.41 Aligned_cols=291 Identities=23% Similarity=0.360 Sum_probs=240.0
Q ss_pred CCCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 43 SSRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 43 ~~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
...++|+++|+||+||++++.+.|+++.+.|++. .++++++.|++++|+.++++++. +++|.||++|||||+|||+
T Consensus 5 ~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~---~~~~~~~~t~~~~~a~~~~~~~~-~~~d~vv~~GGDGTl~~v~ 80 (304)
T 3s40_A 5 KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAA---FPDLHILHTKEQGDATKYCQEFA-SKVDLIIVFGGDGTVFECT 80 (304)
T ss_dssp CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHH---CSEEEEEECCSTTHHHHHHHHHT-TTCSEEEEEECHHHHHHHH
T ss_pred cCCCCEEEEEECcccCCCchHHHHHHHHHHHHHc---CCeEEEEEccCcchHHHHHHHhh-cCCCEEEEEccchHHHHHH
Confidence 4568999999999999999888898888888875 35677788999999999999875 5899999999999999999
Q ss_pred hHhHhCCccccccccccCCcceEEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCeeeEeEEEEEccCCCceEEEEEecc
Q 018199 123 NGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSWVDVGVINGETGEPHYFINVADL 202 (359)
Q Consensus 123 ngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~~iD~~~v~~~~~~~~~f~~~~~~ 202 (359)
|+|+.. ..++|||+||+||+|+|||+||+|.++++|++.+++|+++++|++++++ +||+|++++
T Consensus 81 ~~l~~~-----------~~~~~l~iiP~Gt~N~~ar~lg~~~~~~~a~~~i~~g~~~~iDlg~v~~-----~~F~~~~~~ 144 (304)
T 3s40_A 81 NGLAPL-----------EIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANG-----QHFLNFWGI 144 (304)
T ss_dssp HHHTTC-----------SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHTTCCEEEEEEEEETT-----EEESSEEEE
T ss_pred HHHhhC-----------CCCCcEEEecCCcHHHHHHHcCCCccHHHHHHHHHhCCeEEEEEEEECC-----EEEEEEEee
Confidence 999742 2579999999999999999999999999999999999999999999987 999999999
Q ss_pred ccchhhcccc--cccccccChhhHHHHHHHHhcCCCCcEEEEEcCeeEEEecceEEEEEeCcccccCCceeCCCCCCCCC
Q 018199 203 HLSAKAGYYA--SRYKRFGNLCYVIGALQAFMGHRNQDLRVKVNEGEWEEYSQVTALCIGNAKYFGGGMKITPNADPRNG 280 (359)
Q Consensus 203 G~~a~~~~~~--~~~~~~G~~~Y~~~~l~~l~~~~~~~~~i~~d~~~~~~~~~~~~~~v~N~~~~ggg~~i~P~a~~~DG 280 (359)
|++|++.... +.++++|+++|++++++.++++++++++|++|+++++. ++.+++|+|++|+|+++.++|+|+++||
T Consensus 145 G~da~v~~~~~~~~k~~~G~~~Y~~~~l~~l~~~~~~~~~i~~dg~~~~~--~~~~v~v~N~~~~Ggg~~~~p~a~~~DG 222 (304)
T 3s40_A 145 GLVSEVSNNIDAEEKAKLGKIGYYLSTIRTVKNAETFPVKITYDGQVYED--EAVLVMVGNGEYLGGIPSFIPNVKCDDG 222 (304)
T ss_dssp C------------------CHHHHTTTC------CCEEEEEEETTEEEEE--EEEEEEEECSSEETTEECSSTTCCTTSS
T ss_pred hHHHHHHHhcCHHHhhcCCchHHHHHHHHHHhhcCCceEEEEECCEEEEe--EEEEEEEECCCcCCCCcccCCCCcCCCC
Confidence 9999987764 35668999999999999999999999999999988653 7889999999999999999999999999
Q ss_pred eeEEEEEecCCHHHHHHHHHhhhCCeeeeeCCEEEEEEeEEEEEeccCCCCceEEecCCCCCccceEEEEeCCeeEEeC
Q 018199 281 YFEVVILQDFKWYDFILKLLKLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSDGEHLGFLPRKLCVLPAAIEMIC 359 (359)
Q Consensus 281 ~ldv~~v~~~~~~~ll~~l~~~~~G~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~iDGE~~~~~p~~i~v~p~~l~vl~ 359 (359)
+|||+++++.++..+..++..++.|+ ...+.++++++++++|++ +++.++++|||+++..|++++++|++|+|++
T Consensus 223 ~Ldv~~v~~~~~~~l~~l~~~~~~g~-~~~~~v~~~~~~~v~i~~---~~~~~~~~DGE~~~~~p~~i~v~p~al~v~~ 297 (304)
T 3s40_A 223 TLDIFVVKSTGIQAFKDYIGKKLFED-SNENDIFHVKAKSIHIET---EEEKEVDTDGESSLHTPCQIELLQGHFTMIY 297 (304)
T ss_dssp CEEEEEEETTCHHHHHHHTTCCCSSC-CCTTTEEEEEESEEEEEE---SSCCEEEEC--CCEESSEEEEEEEEEEEEEC
T ss_pred EEEEEEEccCCHHHHHHHHHHHhcCC-CCCCcEEEEEccEEEEEe---CCCcEEEeCCCCCCCceEEEEEECCeEEEEe
Confidence 99999999988866555544445565 677899999999999996 4689999999999989999999999999985
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=100.00 E-value=1.4e-54 Score=409.91 Aligned_cols=290 Identities=26% Similarity=0.397 Sum_probs=256.5
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHh
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGF 125 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl 125 (359)
+++++||+||.||++++.+.++++.+.|++. ++++.+..|++++++.++++++..+++|.||++||||||++|+|+|
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~---g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~GGDGTv~~v~~~l 100 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKA---GYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGI 100 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHT---TEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEECHHHHHHHHHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHc---CCeEEEEEecCcchHHHHHHHHhhcCCCEEEEEcCchHHHHHHHHH
Confidence 5789999999999988888888888888864 4567778899999999999888778899999999999999999999
Q ss_pred HhCCccccccccccCCcceEEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCeeeEeEEEEEccCCCceEEEEEeccccc
Q 018199 126 FSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSWVDVGVINGETGEPHYFINVADLHLS 205 (359)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~~iD~~~v~~~~~~~~~f~~~~~~G~~ 205 (359)
+.. ..++||++||+||+|+||++||++.++.++++.+++|+.+++|++++++ ++|+|++++|++
T Consensus 101 ~~~-----------~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~~~iD~g~v~~-----r~fl~~~~~G~~ 164 (337)
T 2qv7_A 101 AEK-----------PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNN-----RYFINLAAGGQL 164 (337)
T ss_dssp TTC-----------SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEEEEEEEEETT-----EEESSEEEEECB
T ss_pred HhC-----------CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCcEEEEEEEECC-----EEEEEEeeeccc
Confidence 642 3579999999999999999999999999999999999999999999976 999999999999
Q ss_pred hhhcccc--cccccccChhhHHHHHHHHhcCCCCcEEEEEcCeeEEEecceEEEEEeCcccccCCceeCCCCCCCCCeeE
Q 018199 206 AKAGYYA--SRYKRFGNLCYVIGALQAFMGHRNQDLRVKVNEGEWEEYSQVTALCIGNAKYFGGGMKITPNADPRNGYFE 283 (359)
Q Consensus 206 a~~~~~~--~~~~~~G~~~Y~~~~l~~l~~~~~~~~~i~~d~~~~~~~~~~~~~~v~N~~~~ggg~~i~P~a~~~DG~ld 283 (359)
|++.... +.++++|+++|.+++++.+++.++++++|++|++.++. +..+++++|++++|||+.++|+|+++||.||
T Consensus 165 a~v~~~~~~~~k~~~G~~~Y~~~~l~~l~~~~~~~~~i~~dg~~~~~--~~~~v~v~n~~~~gGg~~i~P~a~~~DG~ld 242 (337)
T 2qv7_A 165 TQVSYETPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNVFQG--EALLFFLGLTNSMAGFEKLVPDAKLDDGYFT 242 (337)
T ss_dssp CC-------------CGGGSCCCTTTTGGGBCCEEEEEEETTEEEEE--EEEEEEEESSCCCSSCSCSSTTCCSSSSCEE
T ss_pred HHHHHHhhHHHHhccChHHHHHHHHHHHHhCCCccEEEEECCEEEEe--eEEEEEEECCCCCCCCCccCCCCcCCCCeEE
Confidence 9987654 34567899999999999999999999999999988753 6788999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHHhhhCCeeeeeCCEEEEEEeEEEEEeccCCCCceEEecCCCCCccceEEEEeCCeeEEeC
Q 018199 284 VVILQDFKWYDFILKLLKLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSDGEHLGFLPRKLCVLPAAIEMIC 359 (359)
Q Consensus 284 v~~v~~~~~~~ll~~l~~~~~G~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~iDGE~~~~~p~~i~v~p~~l~vl~ 359 (359)
++++++.+++.+++.++.++.|+|.+.+.++++++++++|+. +++.++++|||.....|+++++.|++++|++
T Consensus 243 v~~v~~~~~~~l~~~~~~v~~g~~~~~~~v~~~~~~~i~i~~---~~~~~~~iDGE~~~~~~i~i~v~p~~l~v~~ 315 (337)
T 2qv7_A 243 LIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISS---FTDLQLNVDGEYGGKLPANFLNLERHIDVFA 315 (337)
T ss_dssp EEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEEC---SSCCEEEETTEEEEESCEEEEEEEEEEEEEC
T ss_pred EEEEccCCHHHHHHHHHHHhcCCccCCCCEEEEEeeEEEEEE---CCCCeEEECCCcCCCCcEEEEEEcCeEEEEe
Confidence 999999999999998899999999999999999999999985 4578999999999888999999999999984
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=100.00 E-value=6.2e-54 Score=404.47 Aligned_cols=287 Identities=23% Similarity=0.325 Sum_probs=248.2
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
.++++++||+||.||++ +.|+++.+.|++. ++++.+..|++++++.++++++..+++|.||++||||||++|+|
T Consensus 27 ~~~~~~~vi~Np~sg~~---~~~~~i~~~l~~~---g~~~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~GGDGTl~~v~~ 100 (332)
T 2bon_A 27 AEFPASLLILNGKSTDN---LPLREAIMLLREE---GMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVST 100 (332)
T ss_dssp ---CCEEEEECSSSTTC---HHHHHHHHHHHTT---TCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEESHHHHHHHHH
T ss_pred hhcceEEEEECCCCCCC---chHHHHHHHHHHc---CCcEEEEEecCcchHHHHHHHHHhcCCCEEEEEccchHHHHHHH
Confidence 34789999999999876 5577888888764 45677778888999999988887788999999999999999999
Q ss_pred HhHhCCccccccccccCCcceEEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCeeeEeEEEEEccCCCce-EEEEEecc
Q 018199 124 GFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSWVDVGVINGETGEPH-YFINVADL 202 (359)
Q Consensus 124 gl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~~iD~~~v~~~~~~~~-~f~~~~~~ 202 (359)
+|.... ...++|||+||+||+|+||++++++.++.++++.+++|+.+++|++++++ + +|+|++++
T Consensus 101 ~l~~~~---------~~~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~~~iDlg~v~~-----r~~fl~~~~~ 166 (332)
T 2bon_A 101 ALIQCE---------GDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNK-----QTCFINMATG 166 (332)
T ss_dssp HHHHCC---------SSCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEEEEEEEEEETT-----SCEESSEEEE
T ss_pred HHhhcc---------cCCCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCeEEeeEEEECC-----ceEEEEEEeE
Confidence 998532 14578999999999999999999999999999999999999999999987 6 99999999
Q ss_pred ccchhhccc--ccccccccChhhHHHHHHHHhcCCCCcEEEEEcCeeEEEecceEEEEEeCcccccCCceeCCCCCCCCC
Q 018199 203 HLSAKAGYY--ASRYKRFGNLCYVIGALQAFMGHRNQDLRVKVNEGEWEEYSQVTALCIGNAKYFGGGMKITPNADPRNG 280 (359)
Q Consensus 203 G~~a~~~~~--~~~~~~~G~~~Y~~~~l~~l~~~~~~~~~i~~d~~~~~~~~~~~~~~v~N~~~~ggg~~i~P~a~~~DG 280 (359)
|++|.+... .+.++++|+++|++++++.+.+.++++++|++|++.++. ++.+++++|++|+|||+.++|+|+++||
T Consensus 167 G~da~v~~~~~~~~k~~~G~~~Y~~~~l~~l~~~~~~~~~i~~dg~~~~~--~~~~v~v~N~~~~ggg~~i~P~a~~~DG 244 (332)
T 2bon_A 167 GFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQG--DALVIGIGNGRQAGGGQQLCPNALINDG 244 (332)
T ss_dssp EEEEEC----------CCHHHHHHHHHTSCEEEEECEEEEEEETTEEEEE--EESEEEEESSSCBTTTBCSCTTCCTTSS
T ss_pred CccHHHHHHhhHHhHhcccHHHHHHHHHHHHhhCCCeeEEEEECCEEEEE--EEEEEEEECCCccCCCcccCCCCCCCCC
Confidence 999998754 345567899999999999999888999999999998764 6778999999999999999999999999
Q ss_pred eeEEEEEecCCHHHHHHHHHhhhCCeeeeeCCEEEEEEeEEEEEeccCCCCceEEecCCCCCccceEEEEeCCeeEEeC
Q 018199 281 YFEVVILQDFKWYDFILKLLKLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSDGEHLGFLPRKLCVLPAAIEMIC 359 (359)
Q Consensus 281 ~ldv~~v~~~~~~~ll~~l~~~~~G~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~iDGE~~~~~p~~i~v~p~~l~vl~ 359 (359)
.||++++++. ++ ++..+..++.| |.+ +.+.++++++++|+. +++.++++|||.++..|+++++.|++++|++
T Consensus 245 ~Ldv~iv~~~-~~-~l~~~~~~~~g-~~~-~~v~~~~~~~i~I~~---~~~~~~~iDGE~~~~~~~~i~v~p~al~vl~ 316 (332)
T 2bon_A 245 LLQLRIFTGD-EI-LPALVSTLKSD-EDN-PNIIEGASSWFDIQA---PHDITFNLDGEPLSGQNFHIEILPAALRCRL 316 (332)
T ss_dssp CEEEEEECCS-SC-CHHHHHHHHTT-CCC-TTEEEEEESEEEEEE---EEEEEEEETTEEEEEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEECCH-HH-HHHHHHHHHcC-CCC-CcEEEEEeeEEEEEE---CCCCeEEecCCCCCCceEEEEEECCeeEEEe
Confidence 9999999998 66 77888888999 776 899999999999986 3578999999999888999999999999974
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=99.83 E-value=5.1e-21 Score=176.73 Aligned_cols=250 Identities=12% Similarity=0.123 Sum_probs=149.1
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchH----HHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSH----AIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~----a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
|+++++|+||.++ +..+.++++...|++. ++++....+..... ......+...+++|.||++|||||++++
T Consensus 5 mkki~ii~np~~~--~~~~~~~~i~~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GGDGT~l~a 79 (292)
T 2an1_A 5 FKCIGIVGHPRHP--TALTTHEMLYRWLCDQ---GYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGA 79 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHT---TCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSCHHHHHHH
T ss_pred CcEEEEEEcCCCH--HHHHHHHHHHHHHHHC---CCEEEEecchhhhcccccccccchhhcccCCCEEEEEcCcHHHHHH
Confidence 7899999999864 3445567777777764 34444333321100 0000122234568999999999999999
Q ss_pred HhHhHhCCccccccccccCCcce-EEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCeeeEeEEEEEccCCCceEEEEEe
Q 018199 122 VNGFFSAGKLVTNHNRESAHSTA-LGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSWVDVGVINGETGEPHYFINVA 200 (359)
Q Consensus 122 lngl~~~~~~~~~~~~~~~~~~~-lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~~iD~~~v~~~~~~~~~f~~~~ 200 (359)
++++.. .++| ||| |+||.|.|++ ++ +.+++++++.+++|+.+ ++. |+|+++.
T Consensus 80 ~~~~~~-------------~~~P~lGI-~~Gt~gfla~-~~-~~~~~~al~~i~~g~~~------~~~-----r~~l~~~ 132 (292)
T 2an1_A 80 ARTLAR-------------YDINVIGI-NRGNLGFLTD-LD-PDNALQQLSDVLEGRYI------SEK-----RFLLEAQ 132 (292)
T ss_dssp HHHHTT-------------SSCEEEEB-CSSSCCSSCC-BC-TTSHHHHHHHHHTTCEE------EEE-----EEEEEEE
T ss_pred HHHhhc-------------CCCCEEEE-ECCCcccCCc-CC-HHHHHHHHHHHHcCCCE------EEE-----eEEEEEE
Confidence 999853 2345 666 8999766665 56 78899999999999873 555 8888754
Q ss_pred ccccchhhcccccccccccChhhHHHHHHHHhc--CCCCcEEEEEcCeeEEEe-cceEEEEEeCcc----cccCCceeCC
Q 018199 201 DLHLSAKAGYYASRYKRFGNLCYVIGALQAFMG--HRNQDLRVKVNEGEWEEY-SQVTALCIGNAK----YFGGGMKITP 273 (359)
Q Consensus 201 ~~G~~a~~~~~~~~~~~~G~~~Y~~~~l~~l~~--~~~~~~~i~~d~~~~~~~-~~~~~~~v~N~~----~~ggg~~i~P 273 (359)
..+- ... ....|.+.-+..... .+..++++++|++.+... .....++..|++ ..+||..+.|
T Consensus 133 ~~~~-~~~----------~~~~~alnev~i~~~~~~~~~~~~v~idg~~~~~~~~dglivstptGSTay~~SaGG~iv~P 201 (292)
T 2an1_A 133 VCQQ-DRQ----------KRISTAINEVVLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTP 201 (292)
T ss_dssp EECC---------------CEEEESSEEEEEESSTTCCEEEEEEETTEEEEEEEESEEEEECTGGGGTHHHHTTCCEECT
T ss_pred EEeC-Cce----------EeeeeEeeeEEEecCCCCceEEEEEEECCEEEEEEEeCEEEECCCCchHHHHHhCCCCCCCC
Confidence 3221 000 001111111111111 356788999999875432 345556666765 2356667888
Q ss_pred CCCCCCCeeEEEEEecCCHHHHHHHHHhhhCCeeeeeCCEEEEEEeEEEEEeccCCCCceEEecCCCCCc----cceEEE
Q 018199 274 NADPRNGYFEVVILQDFKWYDFILKLLKLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSDGEHLGF----LPRKLC 349 (359)
Q Consensus 274 ~a~~~DG~ldv~~v~~~~~~~ll~~l~~~~~G~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~iDGE~~~~----~p~~i~ 349 (359)
++ +++++.+..... +++++ +.+.+.++++|+..+.+++..+++|||.... .+++|+
T Consensus 202 ~~-------~~~~l~pi~p~~--------l~~r~-----iv~~~~~~i~i~~~~~~~~~~~~~DG~~~~~~~~~~~v~i~ 261 (292)
T 2an1_A 202 SL-------DAITLVPMFPHT--------LSARP-----LVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIR 261 (292)
T ss_dssp TC-------SEEEEEEESCSS--------TTCCC-----EEEETTCCEEEEECC---CEEEEETTSCCEEECTTCEEEEE
T ss_pred CC-------CeEEEEecCcCc--------CCCCC-----EEECCCCEEEEEEccCCCceEEEECCCeEEecCCCcEEEEE
Confidence 76 677776633211 22332 3344556677765322456889999997643 379999
Q ss_pred EeCCeeEEe
Q 018199 350 VLPAAIEMI 358 (359)
Q Consensus 350 v~p~~l~vl 358 (359)
+.|++++++
T Consensus 262 ~~~~~~~li 270 (292)
T 2an1_A 262 RCDYHLNLI 270 (292)
T ss_dssp EEEEEEEEE
T ss_pred ECCCEEEEE
Confidence 999999986
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=99.73 E-value=4.9e-18 Score=153.70 Aligned_cols=229 Identities=13% Similarity=0.100 Sum_probs=141.3
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGFF 126 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~ 126 (359)
+|+++|+||.||++ +.+.+ ..+.+.+. ++++. +. + +...+++|.||++|||||++++++.+.
T Consensus 1 mki~ii~Np~~~~~-~~~~~----~~i~~~l~-~~~~~---~~---~------~~~~~~~D~vv~~GGDGTll~~a~~~~ 62 (258)
T 1yt5_A 1 MKIAILYREEREKE-GEFLK----EKISKEHE-VIEFG---EA---N------APGRVTADLIVVVGGDGTVLKAAKKAA 62 (258)
T ss_dssp CEEEEEECGGGHHH-HHHHH----HHHTTTSE-EEEEE---ES---S------SCSCBCCSEEEEEECHHHHHHHHTTBC
T ss_pred CEEEEEEeCCCchH-HHHHH----HHHHHHhc-CCcee---cc---c------ccccCCCCEEEEEeCcHHHHHHHHHhC
Confidence 36999999999764 43333 33444332 22321 21 1 223457899999999999999999884
Q ss_pred hCCccccccccccCCcce-EEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCeeeEeEEEEEccCCCceEEEEEeccccc
Q 018199 127 SAGKLVTNHNRESAHSTA-LGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSWVDVGVINGETGEPHYFINVADLHLS 205 (359)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~-lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~~iD~~~v~~~~~~~~~f~~~~~~G~~ 205 (359)
. .+| +|| +.||.|.++ .+. +.++.++++.+++|+.+ ++. |+|++....+-.
T Consensus 63 -------------~-~~PilGI-n~G~~Gfl~-~~~-~~~~~~al~~i~~g~~~------i~~-----r~~l~~~~~~~~ 114 (258)
T 1yt5_A 63 -------------D-GTPMVGF-KAGRLGFLT-SYT-LDEIDRFLEDLRNWNFR------EET-----RWFIQIESELGN 114 (258)
T ss_dssp -------------T-TCEEEEE-ESSSCCSSC-CBC-GGGHHHHHHHHHTTCCE------EEE-----EEEEEEEETTEE
T ss_pred -------------C-CCCEEEE-ECCCCCccC-cCC-HHHHHHHHHHHHcCCce------EEE-----EEEEEEEEcCCc
Confidence 2 455 666 699995555 576 78899999999999874 444 777775422110
Q ss_pred hhhcccccccccccChhhHHHHHHHHhcCCCCcEEEEEcCeeEEEe-cceEEEEEeCcc-c---ccCCceeCCCCCCCCC
Q 018199 206 AKAGYYASRYKRFGNLCYVIGALQAFMGHRNQDLRVKVNEGEWEEY-SQVTALCIGNAK-Y---FGGGMKITPNADPRNG 280 (359)
Q Consensus 206 a~~~~~~~~~~~~G~~~Y~~~~l~~l~~~~~~~~~i~~d~~~~~~~-~~~~~~~v~N~~-~---~ggg~~i~P~a~~~DG 280 (359)
..+..+....+ + ...+..++++.+|++.+... .....+...|++ . .+||..+.|+++
T Consensus 115 ~~alNev~i~~--~------------~~~~~~~~~v~idg~~~~~~~~dGlivsTptGSTaY~~SaGGpiv~P~~~---- 176 (258)
T 1yt5_A 115 HLALNDVTLER--D------------LSGKMVEIEVEVEHHSSMWFFADGVVISTPTGSTAYSLSIGGPIIFPECE---- 176 (258)
T ss_dssp EEESSEEEEEC--C------------TTSCCEEEEEEETTSCCEEEEESEEEEECTGGGGTTTTTTTCCCCCTTCC----
T ss_pred ceeeeEEEEec--C------------CCCceEEEEEEECCEEEEEEEccEEEEEcCCCcHHHHhhCCCcccCCCCC----
Confidence 00000000000 0 12356778999999875432 244455555554 2 256666778764
Q ss_pred eeEEEEEecCCHHHHHHHHHhhhCCeeeeeCCEEEEEEeEEEEEeccCCCCceEEecCCCCCc-cceEEEEeCCeeEEe
Q 018199 281 YFEVVILQDFKWYDFILKLLKLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSDGEHLGF-LPRKLCVLPAAIEMI 358 (359)
Q Consensus 281 ~ldv~~v~~~~~~~ll~~l~~~~~G~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~iDGE~~~~-~p~~i~v~p~~l~vl 358 (359)
++++.+..... +..+ .+...+.++++|+. +++..+.+|||.... .+++|++.|++++++
T Consensus 177 ---~~~i~pi~p~~--------l~~r-----p~v~~~~~~i~i~~---~~~~~~~~DG~~~~~~~~i~i~~~~~~~~li 236 (258)
T 1yt5_A 177 ---VLEISPIAPQF--------FLTR-----SVVIPSNFKVVVES---QRDINMLVDGVLTGKTKRIEVKKSRRYVRIL 236 (258)
T ss_dssp ---EEEEEEESCST--------TCCC-----CEEEETTSCEEEEE---EEEEEEEETTEEEEEEEEEEEEEEEEEEEEE
T ss_pred ---EEEEEEecccc--------ccCC-----CEEECCCCEEEEEE---CCCEEEEECCCcceeeEEEEEEECCCeEEEE
Confidence 45555543211 1222 23344566777775 346889999998754 469999999999986
No 6
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=99.71 E-value=1.3e-17 Score=154.79 Aligned_cols=247 Identities=14% Similarity=0.154 Sum_probs=141.9
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCch----------------HHHHHHHH-HHHcCCCE
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPS----------------HAIDITRE-AIKEGADA 108 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~----------------~a~~~~~~-~~~~~~d~ 108 (359)
|++++||+||.++ ...+.++++...|++. ++++.+..+.... +.....+. ...+++|.
T Consensus 4 m~ki~iI~n~~~~--~~~~~~~~l~~~L~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 78 (307)
T 1u0t_A 4 HRSVLLVVHTGRD--EATETARRVEKVLGDN---KIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCEL 78 (307)
T ss_dssp -CEEEEEESSSGG--GGSHHHHHHHHHHHTT---TCEEEEEC-----------------------------------CCC
T ss_pred CCEEEEEEeCCCH--HHHHHHHHHHHHHHHC---CCEEEEecchhhhhhcccccccccccccccccccccccccccCCCE
Confidence 6899999999874 3445577777788764 3444444443221 11111111 24467899
Q ss_pred EEEEeCCchHHHHHhHhHhCCccccccccccCCcce-EEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCeeeEeEEEEE
Q 018199 109 VIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTA-LGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSWVDVGVIN 187 (359)
Q Consensus 109 ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~-lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~~iD~~~v~ 187 (359)
||++|||||++++++.+... .+| +| |+.||.|.++. + .+.+++++++.+++|+.+. +
T Consensus 79 vi~~GGDGT~l~a~~~~~~~-------------~~pvlg-i~~G~~gfl~~-~-~~~~~~~~~~~i~~g~~~~------~ 136 (307)
T 1u0t_A 79 VLVLGGDGTFLRAAELARNA-------------SIPVLG-VNLGRIGFLAE-A-EAEAIDAVLEHVVAQDYRV------E 136 (307)
T ss_dssp EEEEECHHHHHHHHHHHHHH-------------TCCEEE-EECSSCCSSCS-E-EGGGHHHHHHHHHHTCCEE------E
T ss_pred EEEEeCCHHHHHHHHHhccC-------------CCCEEE-EeCCCCccCcc-c-CHHHHHHHHHHHHcCCcEE------E
Confidence 99999999999999998632 345 66 58999998885 5 3678899999999997654 2
Q ss_pred ccCCCceEEEEEeccccchhhcccccccccccChhhHHHHHHHHh-----cCCCCcEEEEEcCeeEEEe-cceEEEEEeC
Q 018199 188 GETGEPHYFINVADLHLSAKAGYYASRYKRFGNLCYVIGALQAFM-----GHRNQDLRVKVNEGEWEEY-SQVTALCIGN 261 (359)
Q Consensus 188 ~~~~~~~~f~~~~~~G~~a~~~~~~~~~~~~G~~~Y~~~~l~~l~-----~~~~~~~~i~~d~~~~~~~-~~~~~~~v~N 261 (359)
. |+|+.....+ +.. ..|...++..+. ..+..++++.+|++.+... .....+...|
T Consensus 137 ~-----r~~l~~~v~~-~g~-------------~~~~~~ALNev~i~~~~~~~~~~~~v~idg~~~~~~~~dGlivsTpt 197 (307)
T 1u0t_A 137 D-----RLTLDVVVRQ-GGR-------------IVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPT 197 (307)
T ss_dssp E-----ECCEEEEEEE-TTE-------------EEEEEEESSEEEEECSSSSSCEEEEEESSSSEEEEEEESEEEEECTG
T ss_pred E-----EEEEEEEEEe-Ccc-------------ceeceeeeeeEEEecCCCceEEEEEEEECCEEEEEEcCCEEEEccch
Confidence 2 4444321111 100 000000111111 1234567888998776432 2333344337
Q ss_pred cc-cc---cCCceeCCCCCCCCCeeEEEEEecCCHHHHHHHHHhhhCCeeeeeCCEEEEEEeEEEEEeccCCCCceEEec
Q 018199 262 AK-YF---GGGMKITPNADPRNGYFEVVILQDFKWYDFILKLLKLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSD 337 (359)
Q Consensus 262 ~~-~~---ggg~~i~P~a~~~DG~ldv~~v~~~~~~~ll~~l~~~~~G~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~iD 337 (359)
++ .| +||..+.|++ +++++.+... ..+.+++.- .-..++++|+..+..++..+++|
T Consensus 198 GSTaY~lSaGGpiv~P~~-------~~~~l~pi~p--------~~l~~rp~v-----~~~~~~i~i~v~~~~~~~~~~~D 257 (307)
T 1u0t_A 198 GSTAYAFSAGGPVLWPDL-------EAILVVPNNA--------HALFGRPMV-----TSPEATIAIEIEADGHDALVFCD 257 (307)
T ss_dssp GGGTHHHHTTCCEECTTC-------CCEEEEEESC--------SSSCCCCEE-----ECTTCCEEEEECTTSCCEEEEET
T ss_pred hhHHHHhcCCCCccCCCC-------CeEEEEeecC--------ccccCCCEE-----ECCCCEEEEEEecCCCCEEEEEC
Confidence 66 33 6777788876 5556555442 123344322 22345566554322456889999
Q ss_pred CCCCCc----cceEEEEeCCeeEEe
Q 018199 338 GEHLGF----LPRKLCVLPAAIEMI 358 (359)
Q Consensus 338 GE~~~~----~p~~i~v~p~~l~vl 358 (359)
||.... .+++|+..|++++++
T Consensus 258 G~~~~~l~~g~~i~i~~~~~~~~li 282 (307)
T 1u0t_A 258 GRREMLIPAGSRLEVTRCVTSVKWA 282 (307)
T ss_dssp TTEEEEECTTCEEEEEECSSCEEEE
T ss_pred CCeEEecCCCCEEEEEECCCeeEEE
Confidence 997422 479999999999986
No 7
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=99.63 E-value=1.1e-15 Score=139.27 Aligned_cols=234 Identities=15% Similarity=0.193 Sum_probs=138.9
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGFF 126 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~ 126 (359)
+++.||+||. .++.+.++++...|++. ++++ . .+++|.||++|||||++++++.+.
T Consensus 1 mki~ii~n~~---~~~~~~~~~l~~~l~~~---g~~v-----~-------------~~~~D~vv~lGGDGT~l~aa~~~~ 56 (272)
T 2i2c_A 1 MKYMITSKGD---EKSDLLRLNMIAGFGEY---DMEY-----D-------------DVEPEIVISIGGDGTFLSAFHQYE 56 (272)
T ss_dssp CEEEEEECCS---HHHHHHHHHHHHHHTTS---SCEE-----C-------------SSSCSEEEEEESHHHHHHHHHHTG
T ss_pred CEEEEEECCC---HHHHHHHHHHHHHHHHC---CCEe-----C-------------CCCCCEEEEEcCcHHHHHHHHHHh
Confidence 4789999974 34445566666666543 2222 0 256899999999999999999985
Q ss_pred hCCccccccccccCCcce-EEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCeeeEeEEEEEccCCCceEEEEEeccccc
Q 018199 127 SAGKLVTNHNRESAHSTA-LGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRSWVDVGVINGETGEPHYFINVADLHLS 205 (359)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~-lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~~iD~~~v~~~~~~~~~f~~~~~~G~~ 205 (359)
.. ..++| +|| |.|| |.|+..+. +.+++++++.+++|+.+ ++. +++++..-.
T Consensus 57 ~~-----------~~~~PilGI-n~G~-lgfl~~~~-~~~~~~~l~~l~~g~~~------i~~-----r~~L~~~v~--- 108 (272)
T 2i2c_A 57 ER-----------LDEIAFIGI-HTGH-LGFYADWR-PAEADKLVKLLAKGEYQ------KVS-----YPLLKTTVK--- 108 (272)
T ss_dssp GG-----------TTTCEEEEE-ESSS-CCSSCCBC-GGGHHHHHHHHHTTCCE------EEE-----EEEEEEEEE---
T ss_pred hc-----------CCCCCEEEE-eCCC-CCcCCcCC-HHHHHHHHHHHHcCCCE------EEE-----EEEEEEEEE---
Confidence 31 02567 555 9999 66888886 77899999999999764 232 444432100
Q ss_pred hhhcccccccccccChhhHHHHHHHH---hcCCCCcEEEEEcCeeEEEe-cceEEEEEeCcc-cc---cCCceeCCCCCC
Q 018199 206 AKAGYYASRYKRFGNLCYVIGALQAF---MGHRNQDLRVKVNEGEWEEY-SQVTALCIGNAK-YF---GGGMKITPNADP 277 (359)
Q Consensus 206 a~~~~~~~~~~~~G~~~Y~~~~l~~l---~~~~~~~~~i~~d~~~~~~~-~~~~~~~v~N~~-~~---ggg~~i~P~a~~ 277 (359)
.. -|...|...++..+ ...+...+++.+|++.+... .....++..|++ .| +||..+.|++
T Consensus 109 ----~~------~g~~~~~~~ALNev~i~~~~~~~~~~i~idg~~~~~~~~DGlivsTptGSTaY~~SaGGpiv~P~~-- 176 (272)
T 2i2c_A 109 ----YG------IGKKEATYLALNESTVKSSGGPFVVDVVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSI-- 176 (272)
T ss_dssp ----ES------SSCCEEEEEESSEEEEEESSSCEEEEEEETTEEEEEEEESEEEEECTGGGGTHHHHTTCCCCCTTS--
T ss_pred ----eC------CCcEEeHHhhhhHhhhcccCcEEEEEEEECCEEEEEEECCEEEEEccccHHHHHHcCCCCeeCCCC--
Confidence 00 01100000000000 01245678999999876532 244555555665 44 6677777764
Q ss_pred CCCeeEEEEEecCCHHHHHHHHHhhhCCeeeeeCCEEEEEEeEEEEEeccCCCCceEEecCCCCC---ccceEEEEeCCe
Q 018199 278 RNGYFEVVILQDFKWYDFILKLLKLYNGTHLSVKNVTSRRAHSIEVEDISSGDSIYVQSDGEHLG---FLPRKLCVLPAA 354 (359)
Q Consensus 278 ~DG~ldv~~v~~~~~~~ll~~l~~~~~G~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~iDGE~~~---~~p~~i~v~p~~ 354 (359)
+++++.+.....+.. ++.+ +++.- .-..++++|+.. .+++..+.+|||.+. ..+++|++.|+.
T Consensus 177 -----~~~~ltpi~p~~l~~--~r~~-~~p~v-----~~~~~~i~i~~~-~~~~~~~~~DG~~~~~~~~~~v~i~~~~~~ 242 (272)
T 2i2c_A 177 -----EAMQLTEMASINNRV--YRTI-GSPLV-----FPKHHVVSLQPV-NDKDFQISVDHLSILHRDVQEIRYEVSAKK 242 (272)
T ss_dssp -----CEEEEEEESCCCSSS--CCCC-CSCEE-----EETTCCEEEEES-SCCCEEEEETTEEEEECSEEEEEEEEEEEE
T ss_pred -----CceEEeCCCCccchh--hhcc-CCcEE-----eCCCCEEEEEEc-CCCCEEEEECCCEeecCCCCEEEEEEcCCE
Confidence 355555543321110 0111 33321 113345666542 245688999999853 246999999999
Q ss_pred eEEe
Q 018199 355 IEMI 358 (359)
Q Consensus 355 l~vl 358 (359)
++++
T Consensus 243 ~~~i 246 (272)
T 2i2c_A 243 IHFA 246 (272)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=98.40 E-value=2.8e-07 Score=87.18 Aligned_cols=114 Identities=17% Similarity=0.238 Sum_probs=72.5
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHH---------------------HHHH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDIT---------------------REAI 102 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~---------------------~~~~ 102 (359)
..+++++||.||.. ....+.++++...|.+.. .+++ ++..+.. +.++. .+..
T Consensus 39 ~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~-~gi~--V~ve~~~--a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (388)
T 3afo_A 39 NPLQNVYITKKPWT--PSTREAMVEFITHLHESY-PEVN--VIVQPDV--AEEISQDFKSPLENDPNRPHILYTGPEQDI 111 (388)
T ss_dssp SCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHC-TTCE--EECCHHH--HHHHHTTCCSCGGGCTTSCEEEEECCHHHH
T ss_pred CCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhC-CCeE--EEEeCch--hhhhhhhccccccccccccccccccchhhc
Confidence 45799999999974 344555667777776541 1222 2332211 11110 1122
Q ss_pred HcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcc-eEEEeeCcChhhhhhhcCCCCCHHHHHHHHHcCCee
Q 018199 103 KEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHST-ALGLIPLGTGSDFARTFGWRNDPYEAVERIAKGVRS 179 (359)
Q Consensus 103 ~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~-~lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~g~~~ 179 (359)
.+++|.||++|||||+..++..+.. ..+ |+--|+.||.+-++ .+. +.+.+++++.+++|+..
T Consensus 112 ~~~~DlVIvlGGDGTlL~aa~~~~~-------------~~vpPiLGIN~G~lGFLt-~~~-~~~~~~al~~il~g~~~ 174 (388)
T 3afo_A 112 VNRTDLLVTLGGDGTILHGVSMFGN-------------TQVPPVLAFALGTLGFLS-PFD-FKEHKKVFQEVISSRAK 174 (388)
T ss_dssp HHHCSEEEEEESHHHHHHHHHTTTT-------------SCCCCEEEEECSSCCSSC-CEE-GGGHHHHHHHHHTTCCE
T ss_pred ccCCCEEEEEeCcHHHHHHHHHhcc-------------cCCCeEEEEECCCcccCC-cCC-hHHHHHHHHHHhcCCce
Confidence 3468999999999999999998742 233 44445999974444 455 35788999999999763
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=97.35 E-value=0.00055 Score=61.61 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=61.7
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGFF 126 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~ 126 (359)
+++.|+.||..- .+++...|++. ++++.. ...... ..++.|.||++|||||+-.++..+.
T Consensus 30 mki~iv~~~~~~-------~~~l~~~L~~~---g~~v~~-~~~~~~---------~~~~~DlvIvlGGDGT~L~aa~~~~ 89 (278)
T 1z0s_A 30 MRAAVVYKTDGH-------VKRIEEALKRL---EVEVEL-FNQPSE---------ELENFDFIVSVGGDGTILRILQKLK 89 (278)
T ss_dssp CEEEEEESSSTT-------HHHHHHHHHHT---TCEEEE-ESSCCG---------GGGGSSEEEEEECHHHHHHHHTTCS
T ss_pred eEEEEEeCCcHH-------HHHHHHHHHHC---CCEEEE-cccccc---------ccCCCCEEEEECCCHHHHHHHHHhC
Confidence 469999998742 44566677764 333322 121111 1246899999999999999998652
Q ss_pred hCCccccccccccCCcceEEEeeCcChhhhhhhcCCCCCHHHHHHHHHc
Q 018199 127 SAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFGWRNDPYEAVERIAK 175 (359)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~lg~~~~~~~al~~i~~ 175 (359)
.. +|+--|..|+-+-++. +. +.+.+++++.+++
T Consensus 90 -------------~~-~PilGIN~G~lGFLt~-~~-~~~~~~~l~~l~~ 122 (278)
T 1z0s_A 90 -------------RC-PPIFGINTGRVGLLTH-AS-PENFEVELKKAVE 122 (278)
T ss_dssp -------------SC-CCEEEEECSSSCTTCC-BB-TTBCHHHHHHHHH
T ss_pred -------------CC-CcEEEECCCCCccccc-cC-HHHHHHHHHHHHh
Confidence 23 8888889998555553 32 3567788888875
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=97.15 E-value=0.0021 Score=59.96 Aligned_cols=109 Identities=18% Similarity=0.271 Sum_probs=68.5
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHH---------HH---------HHHcC
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDIT---------RE---------AIKEG 105 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~---------~~---------~~~~~ 105 (359)
..+|+++||--|.. .......+++...|.+. ++.+.+ +.....+. .+. .+ ...+.
T Consensus 36 ~~~k~I~iv~K~~~--~~~~~~~~~l~~~L~~~---~~~V~v-e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (365)
T 3pfn_A 36 KSPKSVLVIKKMRD--ASLLQPFKELCTHLMEE---NMIVYV-EKKVLEDP-AIASDESFGAVKKKFCTFREDYDDISNQ 108 (365)
T ss_dssp SCCCEEEEEECTTC--GGGHHHHHHHHHHHHHT---SCEEEE-EHHHHHSH-HHHHCSTTHHHHHHCEEECTTTCCCTTT
T ss_pred CCCCEEEEEecCCC--HHHHHHHHHHHHHHHHC---CCEEEE-ehHHhhhh-ccccccccccccccccccccChhhcccC
Confidence 46899999998864 23344566677777764 333322 11111100 000 00 01246
Q ss_pred CCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhhcCCC-----CCHHHHHHHHHcCCee
Q 018199 106 ADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFGWR-----NDPYEAVERIAKGVRS 179 (359)
Q Consensus 106 ~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~lg~~-----~~~~~al~~i~~g~~~ 179 (359)
+|.||++|||||+-.++..+. ...+|+--|-.|+ ||+= .+..++++.+++|+.+
T Consensus 109 ~DlvI~lGGDGT~L~aa~~~~-------------~~~~PvlGiN~G~-------LGFLt~~~~~~~~~~l~~vl~g~~~ 167 (365)
T 3pfn_A 109 IDFIICLGGDGTLLYASSLFQ-------------GSVPPVMAFHLGS-------LGFLTPFSFENFQSQVTQVIEGNAA 167 (365)
T ss_dssp CSEEEEESSTTHHHHHHHHCS-------------SSCCCEEEEESSS-------CTTTCCEESTTHHHHHHHHHHSCCB
T ss_pred CCEEEEEcChHHHHHHHHHhc-------------cCCCCEEEEcCCC-------CccceeecHHHHHHHHHHHHcCCCe
Confidence 899999999999999998653 3457877778886 5552 4678899999998653
No 11
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=87.92 E-value=2.5 Score=39.26 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=55.2
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE---ecC-CchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES---LTS-GPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~---~t~-~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
+|++||..+.+-.. ...++++...|.+. ++++.++ ... ......+.++.+...+.|.||++|| |++-+++
T Consensus 41 ~~~liVtd~~~~~~--~g~~~~v~~~L~~~---g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGG-Gsv~D~A 114 (371)
T 1o2d_A 41 KRALVVTGKSSSKK--NGSLDDLKKLLDET---EISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGG-GSPMDFA 114 (371)
T ss_dssp SEEEEEEESSGGGT--SSHHHHHHHHHHHT---TCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEES-HHHHHHH
T ss_pred CEEEEEECchHHhh--ccHHHHHHHHHHHc---CCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCC-hHHHHHH
Confidence 79999998854211 12355677777653 2233322 122 2234455555555668999999999 8888887
Q ss_pred hHhHhCCcc-ccc-ccc----ccCCcceEEEeeC
Q 018199 123 NGFFSAGKL-VTN-HNR----ESAHSTALGLIPL 150 (359)
Q Consensus 123 ngl~~~~~~-~~~-~~~----~~~~~~~lgiiP~ 150 (359)
-.+...... ..+ .+. .....+|+..||.
T Consensus 115 K~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPT 148 (371)
T 1o2d_A 115 KAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPT 148 (371)
T ss_dssp HHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEEC
T ss_pred HHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeC
Confidence 766432100 000 000 0015689999997
No 12
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=87.84 E-value=0.98 Score=42.49 Aligned_cols=97 Identities=15% Similarity=0.143 Sum_probs=58.8
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc---cccceE--EEe----cCCchHHHHHHHHHHHcC--C---CEEEE
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS---VDCNIC--ESL----TSGPSHAIDITREAIKEG--A---DAVIA 111 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~---~~~~~~--~~~----t~~~~~a~~~~~~~~~~~--~---d~ivv 111 (359)
.+|++||.++... ....+++...|.+... .++.+. .+. ...-....++.+.+...+ . |.||+
T Consensus 36 ~~k~liVtd~~v~----~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIa 111 (393)
T 1sg6_A 36 STTYVLVTDTNIG----SIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIA 111 (393)
T ss_dssp CSEEEEEEEHHHH----HHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEE
T ss_pred CCeEEEEECCcHH----HHHHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEE
Confidence 4789999987531 1234556666654300 022332 221 112234455555555566 7 99999
Q ss_pred EeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeC--cChhhhh
Q 018199 112 VGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL--GTGSDFA 157 (359)
Q Consensus 112 ~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~--GTgN~~A 157 (359)
+|| |++.+++-.+... ....+|+..||. ||+.|-+
T Consensus 112 lGG-Gsv~D~ak~~Aa~----------~~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 112 LGG-GVIGDLTGFVAST----------YMRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp EES-HHHHHHHHHHHHH----------GGGCCEEEEEECSHHHHHTTT
T ss_pred ECC-cHHHHHHHHHHHH----------hcCCCCEEEECCchhhhhhcC
Confidence 998 8988888766421 134689999999 8888873
No 13
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=86.81 E-value=3.3 Score=39.01 Aligned_cols=99 Identities=13% Similarity=0.193 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC----CchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS----GPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~----~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
+|++||.++.+- +.....+++...|. ++++.++... ......+.++.+...++|.||++|| |++-++.
T Consensus 51 ~r~liVtd~~~~--~~~g~~~~v~~~L~-----g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGG-GsviD~A 122 (408)
T 1oj7_A 51 ARVLITYGGGSV--KKTGVLDQVLDALK-----GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGG-GSVLDGT 122 (408)
T ss_dssp CEEEEEECSSHH--HHHSHHHHHHHHTT-----TSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEES-HHHHHHH
T ss_pred CEEEEEECCchh--hhccHHHHHHHHhC-----CCEEEEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCC-chHHHHH
Confidence 789999876531 11113344444443 2334333211 2234445555566678999999999 8888887
Q ss_pred hHhHhCCcccc--c-cc------cccCCcceEEEeeC--cCh
Q 018199 123 NGFFSAGKLVT--N-HN------RESAHSTALGLIPL--GTG 153 (359)
Q Consensus 123 ngl~~~~~~~~--~-~~------~~~~~~~~lgiiP~--GTg 153 (359)
-.+........ + .+ ......+|+..||. ||+
T Consensus 123 K~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtg 164 (408)
T 1oj7_A 123 KFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATG 164 (408)
T ss_dssp HHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSC
T ss_pred HHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchh
Confidence 76654210000 0 00 01125689999997 553
No 14
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=85.81 E-value=1.6 Score=40.42 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=53.0
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEec---C-CchHHHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLT---S-GPSHAIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t---~-~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
.+|++||..+.. ....+++...|.+. .+.++.. . ......+.++.+...+.|.||++|| |++.++
T Consensus 34 ~~r~liVtd~~~-----~~~~~~v~~~L~~~-----~~~v~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGG-Gs~iD~ 102 (353)
T 3hl0_A 34 LSRALVLSTPQQ-----KGDAEALASRLGRL-----AAGVFSEAAMHTPVEVTKTAVEAYRAAGADCVVSLGG-GSTTGL 102 (353)
T ss_dssp CCCEEEECCGGG-----HHHHHHHHHHHGGG-----EEEEECCCCTTCBHHHHHHHHHHHHHTTCSEEEEEES-HHHHHH
T ss_pred CCEEEEEecCch-----hhHHHHHHHHHhhC-----CcEEecCcCCCCcHHHHHHHHHHHhccCCCEEEEeCC-cHHHHH
Confidence 478999988752 23455666666642 1222221 1 1234455555555678999999999 999999
Q ss_pred HhHhHhCCccccccccccCCcceEEEeeC
Q 018199 122 VNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 122 lngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.-.+.. ...+|+..||.
T Consensus 103 aK~iA~------------~~~~p~i~IPT 119 (353)
T 3hl0_A 103 GKAIAL------------RTDAAQIVIPT 119 (353)
T ss_dssp HHHHHH------------HHCCEEEEEEC
T ss_pred HHHHHh------------ccCCCEEEEeC
Confidence 887642 24689999997
No 15
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=85.76 E-value=1.3 Score=41.13 Aligned_cols=82 Identities=21% Similarity=0.244 Sum_probs=52.9
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC----CchHHHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS----GPSHAIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~----~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
.+|++||..+.. ....+++...|.+. .+.++... ......+.++.+...+.|.||++|| |++.++
T Consensus 36 ~~r~liVtd~~~-----~~~~~~v~~~L~~~-----~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGG-GsviD~ 104 (358)
T 3jzd_A 36 AKRALVLCTPNQ-----QAEAERIADLLGPL-----SAGVYAGAVMHVPIESARDATARAREAGADCAVAVGG-GSTTGL 104 (358)
T ss_dssp CSCEEEECCGGG-----HHHHHHHHHHHGGG-----EEEEECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEES-HHHHHH
T ss_pred CCeEEEEeCCcH-----HHHHHHHHHHhccC-----CEEEecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCC-cHHHHH
Confidence 478999988752 23355666666543 22222211 1233445555555678999999999 999999
Q ss_pred HhHhHhCCccccccccccCCcceEEEeeC
Q 018199 122 VNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 122 lngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.-.+.. ...+|+..||.
T Consensus 105 aK~iA~------------~~~~p~i~IPT 121 (358)
T 3jzd_A 105 GKAIAL------------ETGMPIVAIPT 121 (358)
T ss_dssp HHHHHH------------HHCCCEEEEEC
T ss_pred HHHHHh------------ccCCCEEEEeC
Confidence 887642 24688999997
No 16
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=85.53 E-value=5.2 Score=37.44 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=54.8
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEE--Eec----CCchHHHHHHHHHHHcCC---CEEEEEeCC
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICE--SLT----SGPSHAIDITREAIKEGA---DAVIAVGGD 115 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~--~~t----~~~~~a~~~~~~~~~~~~---d~ivv~GGD 115 (359)
..+|++||.++... ....+++...|.+. ++++.. +.. .......++.+.+...+. |.||++||
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~---g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGG- 132 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHI---GCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGG- 132 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHH---TCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEES-
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHc---CCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECC-
Confidence 45899999998752 22445666777653 233322 211 122344555555555555 79999988
Q ss_pred chHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 116 GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 116 GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
|++.+++-.+... ....+|+..||.
T Consensus 133 Gsv~D~ak~~Aa~----------~~rgip~I~IPT 157 (390)
T 3okf_A 133 GVIGDLVGFAAAC----------YQRGVDFIQIPT 157 (390)
T ss_dssp HHHHHHHHHHHHH----------BTTCCEEEEEEC
T ss_pred cHHhhHHHHHHHH----------hcCCCCEEEeCC
Confidence 9999988766321 134689999997
No 17
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=85.18 E-value=2.1 Score=39.71 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=53.7
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccce--EEEecCCch-HHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNI--CESLTSGPS-HAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~--~~~~t~~~~-~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
+|++||.++.+-+ ...+++...|.+. ++++ .+...+... ...+.++.+...+.|.||++|| |++.++.-
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~---g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGG-Gsv~D~aK 103 (370)
T 1jq5_A 32 NKTVVIADEIVWK----IAGHTIVNELKKG---NIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGG-GKTLDTAK 103 (370)
T ss_dssp SEEEEEECHHHHH----HTHHHHHHHHHTT---TCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEES-HHHHHHHH
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHHc---CCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCC-hHHHHHHH
Confidence 7999999876421 2355666667643 2233 222222222 3445555555678999999999 89999887
Q ss_pred HhHhCCccccccccccCCcceEEEeeC
Q 018199 124 GFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 124 gl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.+.. ...+|+..||.
T Consensus 104 ~iA~------------~~~~p~i~IPT 118 (370)
T 1jq5_A 104 AVAD------------ELDAYIVIVPT 118 (370)
T ss_dssp HHHH------------HHTCEEEEEES
T ss_pred HHHH------------hcCCCEEEecc
Confidence 7642 23589999997
No 18
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=85.17 E-value=4.5 Score=37.69 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=55.8
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEe---cC-CchHHHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESL---TS-GPSHAIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~---t~-~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
.+|++||..+...+.. ....+++...|.+. ++++.++. .. ......+.++.+...++|.||++|| |++.++
T Consensus 33 ~~~~livtd~~~~~~~-~g~~~~v~~~L~~~---g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGG-Gsv~D~ 107 (387)
T 3bfj_A 33 GKKALLVTDKGLRAIK-DGAVDKTLHYLREA---GIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGG-GSPHDC 107 (387)
T ss_dssp CSEEEEECCTTTC--C-CSSHHHHHHHHHHT---TCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEES-HHHHHH
T ss_pred CCEEEEEECcchhhcc-chHHHHHHHHHHHc---CCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCC-cchhhH
Confidence 3789999988753210 01355666677653 23333332 11 2234455556666678999999999 888887
Q ss_pred HhHhHhC---Cccccc---cccccCCcceEEEeeC
Q 018199 122 VNGFFSA---GKLVTN---HNRESAHSTALGLIPL 150 (359)
Q Consensus 122 lngl~~~---~~~~~~---~~~~~~~~~~lgiiP~ 150 (359)
.-.+... +....+ ........+|+..||.
T Consensus 108 aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPT 142 (387)
T 3bfj_A 108 GKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNT 142 (387)
T ss_dssp HHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEEC
T ss_pred HHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeC
Confidence 7665431 100000 0001125689999997
No 19
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=84.24 E-value=1.9 Score=40.41 Aligned_cols=85 Identities=13% Similarity=0.141 Sum_probs=49.6
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC-CchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHh
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS-GPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGF 125 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~-~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl 125 (359)
+|++||..+..- ....+++...|.+ . ..+.+..+..+ ......+.++.+...+.|.||++|| |++.++.-.+
T Consensus 53 ~r~liVtd~~~~----~~~~~~v~~~L~~-g-~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGG-Gs~~D~AK~i 125 (387)
T 3uhj_A 53 KRALVLIDRVLF----DALSERIGKSCGD-S-LDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGG-GKTADTAKIV 125 (387)
T ss_dssp SEEEEEECTTTH----HHHHHHC-------C-CEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESS-HHHHHHHHHH
T ss_pred CEEEEEECchHH----HHHHHHHHHHHHc-C-CCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCC-cHHHHHHHHH
Confidence 789999988752 1234455555554 1 12212222222 2233444555555678999999999 9999998876
Q ss_pred HhCCccccccccccCCcceEEEeeC
Q 018199 126 FSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.- ...+|+..||.
T Consensus 126 A~------------~~~~p~i~IPT 138 (387)
T 3uhj_A 126 AI------------DTGARIVIAPT 138 (387)
T ss_dssp HH------------HTTCEEEECCS
T ss_pred HH------------hcCCCEEEecC
Confidence 42 24689999998
No 20
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=84.04 E-value=7 Score=36.19 Aligned_cols=88 Identities=18% Similarity=0.170 Sum_probs=52.3
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC----CchHHHHHHHHHHHcC---CCEEEEEeCCchH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS----GPSHAIDITREAIKEG---ADAVIAVGGDGTL 118 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~----~~~~a~~~~~~~~~~~---~d~ivv~GGDGTv 118 (359)
.+|++||.++... ....+++...|.+. ....+.++... .-....+..+.+...+ .|.||++|| |++
T Consensus 34 ~~k~liVtd~~v~----~~~~~~v~~~L~~~--~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGG-Gsv 106 (368)
T 2gru_A 34 FDQYIMISDSGVP----DSIVHYAAEYFGKL--APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGG-GLT 106 (368)
T ss_dssp CSEEEEEEETTSC----HHHHHHHHHHHTTT--SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEES-HHH
T ss_pred CCEEEEEECCcHH----HHHHHHHHHHHHhc--cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECC-hHH
Confidence 4799999998763 12345566666542 11222222211 2223444444444444 689999998 999
Q ss_pred HHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 119 HEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 119 ~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.++.-.+... ....+|+..||.
T Consensus 107 ~D~ak~~Aa~----------~~rgip~i~IPT 128 (368)
T 2gru_A 107 GNVAGVAAGM----------MFRGIALIHVPT 128 (368)
T ss_dssp HHHHHHHHHH----------BTTCCEEEEEEC
T ss_pred HHHHHHHHHH----------hcCCCCEEEECC
Confidence 9988766421 134689999998
No 21
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=83.76 E-value=4.7 Score=37.90 Aligned_cols=98 Identities=14% Similarity=0.191 Sum_probs=55.1
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEec---C-CchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLT---S-GPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t---~-~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
+|++||..+.+- ......+++...|.+. ++++.++.- . ......+.++.+...++|.||++|| |++-+++
T Consensus 44 ~r~liVtd~~~~--~~~g~~~~v~~~L~~~---g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGG-GsviD~A 117 (407)
T 1vlj_A 44 RKVLFLYGGGSI--KKNGVYDQVVDSLKKH---GIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGG-GSVVDSA 117 (407)
T ss_dssp CEEEEEECSSHH--HHSSHHHHHHHHHHHT---TCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEES-HHHHHHH
T ss_pred CeEEEEECchHH--hhccHHHHHHHHHHHc---CCeEEEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCC-hhHHHHH
Confidence 789999874421 1111355666777653 234433321 1 2234555555666678999999999 8888887
Q ss_pred hHhHhCCcccccc------ccccCCcceEEEeeC
Q 018199 123 NGFFSAGKLVTNH------NRESAHSTALGLIPL 150 (359)
Q Consensus 123 ngl~~~~~~~~~~------~~~~~~~~~lgiiP~ 150 (359)
-.+........+. .......+|+..||.
T Consensus 118 K~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPT 151 (407)
T 1vlj_A 118 KAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLT 151 (407)
T ss_dssp HHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEEC
T ss_pred HHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeC
Confidence 7664321000000 001125789999997
No 22
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=83.08 E-value=18 Score=29.55 Aligned_cols=78 Identities=14% Similarity=0.125 Sum_probs=48.7
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEV 121 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~ev 121 (359)
....++.||.=-. .-....++....|++. +..+++.+. .-..++...++++++..++.++| .++||.+-|--|
T Consensus 10 ~~~P~V~IimGS~----SD~~v~~~a~~~l~~~-gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgv 84 (173)
T 4grd_A 10 HSAPLVGVLMGSS----SDWDVMKHAVAILQEF-GVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGM 84 (173)
T ss_dssp CSSCSEEEEESSG----GGHHHHHHHHHHHHHT-TCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHH
T ss_pred CCCCeEEEEeCcH----hHHHHHHHHHHHHHHc-CCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhh
Confidence 3445788887333 2344556666666653 333333321 12345567778888776778765 556999999999
Q ss_pred HhHhH
Q 018199 122 VNGFF 126 (359)
Q Consensus 122 lngl~ 126 (359)
+-++.
T Consensus 85 vA~~t 89 (173)
T 4grd_A 85 LAAKT 89 (173)
T ss_dssp HHHHC
T ss_pred heecC
Confidence 99873
No 23
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=82.95 E-value=2.8 Score=39.14 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=55.3
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE---ecC-CchHHHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES---LTS-GPSHAIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~---~t~-~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
.+|++||..+.- ......+++...|++. ++++.++ ... ......+.++.+...+.|.||++|| |++.++
T Consensus 31 ~~~~liVtd~~~---~~~g~~~~v~~~L~~~---gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGG-Gsv~D~ 103 (383)
T 3ox4_A 31 FKNALIVSDAFM---NKSGVVKQVADLLKAQ---GINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGG-GSPHDC 103 (383)
T ss_dssp CCEEEEEEEHHH---HHTTHHHHHHHHHHTT---TCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEES-HHHHHH
T ss_pred CCEEEEEECCch---hhCchHHHHHHHHHHc---CCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCC-cHHHHH
Confidence 478999998742 1112356677777753 2333322 122 2234455555555678999999999 888887
Q ss_pred HhHhHh---CCcccccc---ccccCCcceEEEeeC
Q 018199 122 VNGFFS---AGKLVTNH---NRESAHSTALGLIPL 150 (359)
Q Consensus 122 lngl~~---~~~~~~~~---~~~~~~~~~lgiiP~ 150 (359)
.-.+.. .+....+. .......+|+..||.
T Consensus 104 aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPT 138 (383)
T 3ox4_A 104 AKAIALVATNGGEVKDYEGIDKSKKPALPLMSINT 138 (383)
T ss_dssp HHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEEC
T ss_pred HHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeC
Confidence 766532 11000000 001134689999997
No 24
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=82.70 E-value=2.1 Score=39.47 Aligned_cols=83 Identities=13% Similarity=0.064 Sum_probs=51.4
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEe-cCCc--hHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESL-TSGP--SHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~-t~~~--~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
+|++||..+..- ....+++...|++. ++++.++. ...+ ....+. +.+...+.|.||++|| |++.++.-
T Consensus 35 ~~~livtd~~~~----~~~~~~v~~~L~~~---g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGG-Gsv~D~aK 105 (354)
T 3ce9_A 35 KRVSLYFGEGIY----ELFGETIEKSIKSS---NIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGG-GKAIDAVK 105 (354)
T ss_dssp SEEEEEEETTHH----HHHHHHHHHHHHTT---TCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEES-HHHHHHHH
T ss_pred CeEEEEECccHH----HHHHHHHHHHHHHc---CCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECC-hHHHHHHH
Confidence 689999987642 12345566667643 23333322 2222 233333 3333467899999998 89998887
Q ss_pred HhHhCCccccccccccCCcceEEEeeC
Q 018199 124 GFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 124 gl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.+.- ...+|+..||.
T Consensus 106 ~vA~------------~~~~p~i~IPT 120 (354)
T 3ce9_A 106 YMAF------------LRKLPFISVPT 120 (354)
T ss_dssp HHHH------------HHTCCEEEEES
T ss_pred HHHh------------hcCCCEEEecC
Confidence 7642 24689999997
No 25
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=82.37 E-value=8.6 Score=35.64 Aligned_cols=85 Identities=14% Similarity=0.107 Sum_probs=52.0
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEe-cC-----CchHHHHHHHHHHHc---CCCEEEEEeCCch
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESL-TS-----GPSHAIDITREAIKE---GADAVIAVGGDGT 117 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~-t~-----~~~~a~~~~~~~~~~---~~d~ivv~GGDGT 117 (359)
+|++||.++... +..+++...|.+. ++++..+. .. .-....++.+.+... +.|.||++|| |+
T Consensus 44 ~rvlIVtd~~v~-----~~~~~v~~~L~~~---g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGG-Gs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLA-----ETAEEIRKRLAGK---GVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGG-GA 114 (368)
T ss_dssp SEEEEEECGGGH-----HHHHHHHHHHHHT---TCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEES-HH
T ss_pred CEEEEEECccHH-----HHHHHHHHHHHhc---CCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECC-hH
Confidence 899999998752 2356677777653 23332221 11 112344444444333 4699999999 89
Q ss_pred HHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 118 LHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 118 v~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
+.++.-.+... ....+|+..||.
T Consensus 115 v~D~ak~~Aa~----------~~rgip~i~IPT 137 (368)
T 3qbe_A 115 ATDVAGFAAAT----------WLRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHH----------GGGCCEEEEEEC
T ss_pred HHHHHHHHHHH----------hccCCcEEEECC
Confidence 98888766421 124689999997
No 26
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=80.45 E-value=4.7 Score=37.53 Aligned_cols=74 Identities=14% Similarity=0.070 Sum_probs=45.3
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEe---cC-CchHHHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESL---TS-GPSHAIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~---t~-~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
.+|++||..+... .....+++...|++. ++++.++. .. ......+.++.+...++|.||++|| |++.++
T Consensus 31 ~~~~livtd~~~~---~~g~~~~v~~~L~~~---g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGG-Gsv~D~ 103 (386)
T 1rrm_A 31 YQKALIVTDKTLV---QCGVVAKVTDKMDAA---GLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGG-GSPQDT 103 (386)
T ss_dssp CCEEEEECBHHHH---HTTHHHHHHHHHHHT---TCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEES-HHHHHH
T ss_pred CCEEEEEECcchh---hchHHHHHHHHHHHc---CCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCC-hHHHHH
Confidence 3789999876531 112356677777653 23333332 11 2234555566666678999999999 888888
Q ss_pred HhHhH
Q 018199 122 VNGFF 126 (359)
Q Consensus 122 lngl~ 126 (359)
.-.+.
T Consensus 104 aK~iA 108 (386)
T 1rrm_A 104 CKAIG 108 (386)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 27
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=79.81 E-value=2.8 Score=38.55 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC----CchHHHHHHHHHHHcCC---CEEEEEeCCchH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS----GPSHAIDITREAIKEGA---DAVIAVGGDGTL 118 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~----~~~~a~~~~~~~~~~~~---d~ivv~GGDGTv 118 (359)
.+|++||.++...+. ..+++...|.+. ...+.++... .-....++.+.+...+. |.||++|| |++
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~---~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~~~r~d~iIavGG-Gsv 97 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKAL---EVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGG-GVI 97 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECS---CEEEEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEES-HHH
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhC---CcEEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCceEEEECC-hHH
Confidence 578999998764221 233333333221 2233222221 22345555555666667 99999998 888
Q ss_pred HHHHhHhHhCCccccccccccCCcceEEEeeCc
Q 018199 119 HEVVNGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 119 ~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
.+++-.+... ....+|+..||.=
T Consensus 98 ~D~ak~~A~~----------~~rgip~i~IPTT 120 (343)
T 3clh_A 98 SDMVGFASSI----------YFRGIDFINIPTT 120 (343)
T ss_dssp HHHHHHHHHH----------BTTCCEEEEEECS
T ss_pred HHHHHHHHHH----------hccCCCEEEeCCc
Confidence 8888766421 1346899999953
No 28
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=78.75 E-value=25 Score=28.66 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=47.3
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNG 124 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlng 124 (359)
.++.||.= +..-....++....|+. ++..+++.+. .-..++...++++++..++.++| +++|+.+-|--++.+
T Consensus 8 ~~V~Iimg----S~SD~~v~~~a~~~L~~-~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~ 82 (174)
T 3lp6_A 8 PRVGVIMG----SDSDWPVMADAAAALAE-FDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAA 82 (174)
T ss_dssp CSEEEEES----CGGGHHHHHHHHHHHHH-TTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHH
T ss_pred CeEEEEEC----cHHhHHHHHHHHHHHHH-cCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHh
Confidence 46777763 32234455666666765 3333333321 13355677888888877777765 556999999999998
Q ss_pred h
Q 018199 125 F 125 (359)
Q Consensus 125 l 125 (359)
+
T Consensus 83 ~ 83 (174)
T 3lp6_A 83 A 83 (174)
T ss_dssp H
T ss_pred c
Confidence 7
No 29
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=78.02 E-value=26 Score=28.32 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=44.4
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNG 124 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlng 124 (359)
.++.||. |+..-....++....|+.. +..+++.+. .-..++...++++++..++.++| .++|+.+-|--++.+
T Consensus 4 ~~V~Iim----gs~SD~~v~~~a~~~l~~~-gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~ 78 (163)
T 3ors_A 4 MKVAVIM----GSSSDWKIMQESCNMLDYF-EIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVAS 78 (163)
T ss_dssp CCEEEEE----SCGGGHHHHHHHHHHHHHT-TCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHH
T ss_pred CeEEEEE----CcHHHHHHHHHHHHHHHHc-CCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHh
Confidence 3566666 3222244456666666553 333333321 12345566677777666667755 556999999999998
Q ss_pred h
Q 018199 125 F 125 (359)
Q Consensus 125 l 125 (359)
+
T Consensus 79 ~ 79 (163)
T 3ors_A 79 L 79 (163)
T ss_dssp H
T ss_pred c
Confidence 7
No 30
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=76.88 E-value=2.1 Score=39.03 Aligned_cols=50 Identities=20% Similarity=0.261 Sum_probs=38.7
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 94 AIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
..+.++.+...+.|.++++|||||+.-+. .|.+ ..+|+--||.==-||+.
T Consensus 83 ~~~~~~~l~~~~Id~LvvIGGdgS~~~a~-~L~~-------------~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 83 RAVAIENLKKRGIDALVVIGGDGSYMGAM-RLTE-------------MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp HHHHHHHHHHTTCCEEEEEECHHHHHHHH-HHHH-------------TTCCEEEEEBCTTCCCT
T ss_pred HHHHHHHHHHcCCCEEEEECCCchHHHHH-HHHh-------------hCCCEEEEeccccCCCC
Confidence 34455556667899999999999987765 3432 36899999999899987
No 31
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=75.97 E-value=4.3 Score=38.78 Aligned_cols=83 Identities=11% Similarity=0.102 Sum_probs=50.0
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccce--EEEecCCch-HHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNI--CESLTSGPS-HAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~--~~~~t~~~~-~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
+|++||..+.+.+ ...+++...|.+. ++++ .++..+.+. ...+.++.+.. +.|.||++|| |++.++.-
T Consensus 92 ~rvlIVtd~~~~~----~~~~~v~~~L~~~---gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGG-GSviD~AK 162 (450)
T 1ta9_A 92 KSAVVLADQNVWN----ICANKIVDSLSQN---GMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGG-GKTMDSAK 162 (450)
T ss_dssp SEEEEEEEHHHHH----HTHHHHHHHHHHT---TCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEES-HHHHHHHH
T ss_pred CEEEEEECccHHH----HHHHHHHHHHHHC---CCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCC-cHHHHHHH
Confidence 4899999876421 2455666667653 2232 222222222 23333333333 7899999998 89988887
Q ss_pred HhHhCCccccccccccCCcceEEEeeC
Q 018199 124 GFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 124 gl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.+.. ...+|+..||.
T Consensus 163 ~iA~------------~~giP~I~IPT 177 (450)
T 1ta9_A 163 YIAH------------SMNLPSIICPT 177 (450)
T ss_dssp HHHH------------HTTCCEEEEES
T ss_pred HHHH------------hcCCCEEEEeC
Confidence 7642 24689999997
No 32
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=73.18 E-value=6.6 Score=36.10 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=48.8
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC----CchHHHHHHHHHHHcCC---CEEEEEeCCchHH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS----GPSHAIDITREAIKEGA---DAVIAVGGDGTLH 119 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~----~~~~a~~~~~~~~~~~~---d~ivv~GGDGTv~ 119 (359)
+|++||.++... ....+++...| +. + ...+.++... ......+..+.+...+. |.||++|| |++.
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~-g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGG-Gsv~ 103 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SY-E-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGG-GATG 103 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC---------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEES-HHHH
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hc-C-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECC-hHHH
Confidence 789999987531 11234444445 32 1 1333223211 22344455555555566 89999998 8999
Q ss_pred HHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 120 EVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 120 evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
+++-.+... ....+|+..||.
T Consensus 104 D~ak~vA~~----------~~rgip~i~IPT 124 (354)
T 1xah_A 104 DFAGFVAAT----------LLRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHH----------BTTCCEEEEEEC
T ss_pred HHHHHHHHH----------hccCCCEEEECC
Confidence 988766421 135689999998
No 33
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=70.69 E-value=15 Score=33.67 Aligned_cols=84 Identities=14% Similarity=0.088 Sum_probs=50.5
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEec----CCchHHHHHHHHHHHcC---CCEEEEEeCCchH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLT----SGPSHAIDITREAIKEG---ADAVIAVGGDGTL 118 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t----~~~~~a~~~~~~~~~~~---~d~ivv~GGDGTv 118 (359)
.+|++||.++... . ..+++...|. . ... .++.. ..-....+..+.+...+ .|.||++|| |++
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~--~--~~~-~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGG-Gsv 96 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG--V--RHL-LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGG-GTL 96 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT--C--CCE-EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEES-HHH
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc--c--CeE-EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECC-cHH
Confidence 5789999997642 2 4455555554 1 222 22221 12234444544444444 489999998 899
Q ss_pred HHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 119 HEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 119 ~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.+++-.+... ....+|+..||.
T Consensus 97 ~D~ak~~A~~----------~~rgip~i~IPT 118 (348)
T 1ujn_A 97 TDLGGFVAAT----------YLRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHH----------BTTCCEEEEEEC
T ss_pred HHHHHHHHHH----------hccCCCEEEecC
Confidence 9988766421 134689999996
No 34
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=70.46 E-value=3.5 Score=39.71 Aligned_cols=55 Identities=16% Similarity=0.291 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 95 IDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 95 ~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
.++++.+...+.|.++++|||||+.-+.. |.+.- .....++++--||.==-||+.
T Consensus 179 ~~i~~~l~~~~Id~LvvIGGdgS~~~A~~-L~e~~-------~~~g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 179 KEMVDTLERLGVNILFTVGGDGTQRGALV-ISQEA-------KRRGVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp HHHHHHHHHHTCSEEEEEECHHHHHHHHH-HHHHH-------HHHTCCCEEEEEECCTTSSCC
T ss_pred HHHHHHHHHcCCCEEEEeCCCchHHHHHH-HHHHH-------HHhCCCceEEeccccccCCCC
Confidence 45555566678999999999999875442 32100 011346899999998889986
No 35
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=69.28 E-value=44 Score=27.03 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=51.0
Q ss_pred cEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhHh
Q 018199 48 DLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNGF 125 (359)
Q Consensus 48 ~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlngl 125 (359)
++.||. |+..-....++....|+. ++..+++.+. .-..++...++++++..++.++| .++|+.+-|--++.++
T Consensus 7 ~V~Iim----gS~SD~~v~~~a~~~l~~-~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~ 81 (166)
T 3oow_A 7 QVGVIM----GSKSDWSTMKECCDILDN-LGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAK 81 (166)
T ss_dssp EEEEEE----SSGGGHHHHHHHHHHHHH-TTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHHT
T ss_pred eEEEEE----CcHHhHHHHHHHHHHHHH-cCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHHHhc
Confidence 466665 322224455666666765 3333333321 12345567777777665667765 4569999999999987
Q ss_pred HhCCccccccccccCCcceEEEeeCcCh
Q 018199 126 FSAGKLVTNHNRESAHSTALGLIPLGTG 153 (359)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~lgiiP~GTg 153 (359)
...|+--+|.-++
T Consensus 82 ---------------t~~PVIgVP~~~~ 94 (166)
T 3oow_A 82 ---------------TTLPVLGVPVKSS 94 (166)
T ss_dssp ---------------CSSCEEEEECCCT
T ss_pred ---------------cCCCEEEeecCcC
Confidence 3456666666544
No 36
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=69.21 E-value=4.9 Score=36.51 Aligned_cols=51 Identities=25% Similarity=0.383 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
...+.++.+...+.|.++++|||||+.-+.. |.+ ..+++--||.==-||+.
T Consensus 81 ~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~-L~~-------------~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 81 GQLAGIEQLKKHGIDAVVVIGGDGSYHGALQ-LTR-------------HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECHHHHHHHHH-HHH-------------TTCCEEEEEEETTCCCT
T ss_pred HHHHHHHHHHHhCCCEEEEECCchHHHHHHH-HHH-------------hCCCEEEEeecccCCCC
Confidence 3445555566778999999999999876653 432 35899999998889987
No 37
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=68.69 E-value=46 Score=27.09 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=44.8
Q ss_pred cEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhHh
Q 018199 48 DLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNGF 125 (359)
Q Consensus 48 ~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlngl 125 (359)
++.||.= +..-....++....|++ ++..+++.+. .-..++...++++++..++.++| +++|+.+-|--++.++
T Consensus 14 ~V~IimG----S~SD~~v~~~a~~~L~~-~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~ 88 (174)
T 3kuu_A 14 KIAIVMG----SKSDWATMQFAADVLTT-LNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGMLAAK 88 (174)
T ss_dssp CEEEEES----SGGGHHHHHHHHHHHHH-TTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHHHHT
T ss_pred cEEEEEC----cHHHHHHHHHHHHHHHH-cCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhc
Confidence 5777763 32224455666666765 3333333321 13345667777777666667755 5569999999999987
No 38
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=67.83 E-value=50 Score=27.12 Aligned_cols=74 Identities=14% Similarity=0.222 Sum_probs=45.5
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNG 124 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlng 124 (359)
.++.||.=-. .-....++....|+. ++..+++.+. .-..++...++++++..++.++| .++||.+-|--|+.+
T Consensus 22 ~~V~IimGS~----SD~~v~~~a~~~L~~-~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~ 96 (182)
T 1u11_A 22 PVVGIIMGSQ----SDWETMRHADALLTE-LEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAA 96 (182)
T ss_dssp CSEEEEESSG----GGHHHHHHHHHHHHH-TTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHH
T ss_pred CEEEEEECcH----HHHHHHHHHHHHHHH-cCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHHHh
Confidence 4688877333 234455666666665 3333333322 23345666677776655667765 556999999999998
Q ss_pred h
Q 018199 125 F 125 (359)
Q Consensus 125 l 125 (359)
+
T Consensus 97 ~ 97 (182)
T 1u11_A 97 W 97 (182)
T ss_dssp H
T ss_pred c
Confidence 7
No 39
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=67.25 E-value=49 Score=26.83 Aligned_cols=73 Identities=14% Similarity=0.174 Sum_probs=45.4
Q ss_pred cEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhHh
Q 018199 48 DLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNGF 125 (359)
Q Consensus 48 ~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlngl 125 (359)
++.||. |+..-....++....|+. ++..+++.+. .-..++...++++++..++.++| .++|+.+-|--++.++
T Consensus 8 ~V~Iim----gS~SD~~v~~~a~~~l~~-~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~ 82 (169)
T 3trh_A 8 FVAILM----GSDSDLSTMETAFTELKS-LGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAH 82 (169)
T ss_dssp EEEEEE----SCGGGHHHHHHHHHHHHH-TTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHHHHT
T ss_pred cEEEEE----CcHHhHHHHHHHHHHHHH-cCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhc
Confidence 466665 332234455666666765 3333333321 13345677788887777777755 5569999999999987
No 40
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=66.23 E-value=40 Score=27.73 Aligned_cols=75 Identities=17% Similarity=0.262 Sum_probs=46.9
Q ss_pred hhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhHhHhCCccccccccccC
Q 018199 63 GKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNGFFSAGKLVTNHNRESA 140 (359)
Q Consensus 63 ~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlngl~~~~~~~~~~~~~~~ 140 (359)
....++....|+. ++..+++.+. .-..++...++++++..++.++| .++|+.+-|--|+.++.
T Consensus 26 ~~v~~~a~~~L~~-~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t-------------- 90 (183)
T 1o4v_A 26 LPVMKQAAEILEE-FGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASIT-------------- 90 (183)
T ss_dssp HHHHHHHHHHHHH-TTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHC--------------
T ss_pred HHHHHHHHHHHHH-cCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHHHhcc--------------
Confidence 4455666666765 3333333322 23345667777777666667765 55699999999999873
Q ss_pred CcceEEEeeCcCh
Q 018199 141 HSTALGLIPLGTG 153 (359)
Q Consensus 141 ~~~~lgiiP~GTg 153 (359)
..|+--+|.-++
T Consensus 91 -~~PVIgVP~~~~ 102 (183)
T 1o4v_A 91 -HLPVIGVPVKTS 102 (183)
T ss_dssp -SSCEEEEEECCT
T ss_pred -CCCEEEeeCCCC
Confidence 456666666553
No 41
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=66.21 E-value=36 Score=27.66 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=43.4
Q ss_pred cEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhHh
Q 018199 48 DLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNGF 125 (359)
Q Consensus 48 ~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlngl 125 (359)
++.||. |+..-....++....|++ ++..+++.+. .-..++...++++++..++.++| .++||.+-|--|+.++
T Consensus 13 ~V~Iim----GS~SD~~v~~~a~~~L~~-~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~ 87 (170)
T 1xmp_A 13 LVGVIM----GSTSDWETMKYACDILDE-LNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAK 87 (170)
T ss_dssp SEEEEE----SSGGGHHHHHHHHHHHHH-TTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTT
T ss_pred cEEEEE----CcHHHHHHHHHHHHHHHH-cCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhc
Confidence 355555 332334455666666765 3333333322 23345667777776655667755 5569999999999886
No 42
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=61.79 E-value=9.7 Score=34.55 Aligned_cols=49 Identities=18% Similarity=0.240 Sum_probs=37.3
Q ss_pred HHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 95 IDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 95 ~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
.+.++.+...+.|.++++|||||+.-+. .|. ...+|+--||.==-||+.
T Consensus 83 ~~~~~~l~~~~Id~L~~IGGdgS~~~a~-~l~-------------~~~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 83 EKGIANLKKLGIEGLVVIGGDGSYMGAK-KLT-------------EHGFPCVGVPGTIDNDIP 131 (319)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTHHHHHH-HHH-------------HTTCCEEEEEEETTCCCT
T ss_pred HHHHHHHHHcCCCEEEEeCCcHHHHHHH-HHh-------------ccCCcEEEeeccccCCCC
Confidence 3445555667899999999999987654 443 246889999998889886
No 43
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=59.19 E-value=11 Score=34.76 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
...+.++.+...+.|.||++|| |++.++.-.+.. ...+|+..||.
T Consensus 76 ~v~~~~~~~~~~~~D~IIavGG-Gs~iD~aK~iA~------------~~~~P~i~IPT 120 (364)
T 3iv7_A 76 VAERARAVATDNEIDLLVCVGG-GSTIGLAKAIAM------------TTALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEES-HHHHHHHHHHHH------------HHCCCEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCC-cHHHHHHHHHHh------------ccCCCEEEEcC
Confidence 4445555556678999999999 999998887642 24588999997
No 44
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=56.93 E-value=3 Score=38.78 Aligned_cols=33 Identities=18% Similarity=0.408 Sum_probs=27.1
Q ss_pred CCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 105 GADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 105 ~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
+.|.||++|| |++.++.-.+.. ...+|+..||.
T Consensus 94 ~~d~IIavGG-Gsv~D~aK~iA~------------~~~~p~i~IPT 126 (376)
T 1kq3_A 94 ETDVVVGIGG-GKTLDTAKAVAY------------KLKKPVVIVPT 126 (376)
T ss_dssp TCCEEEEEES-HHHHHHHHHHHH------------HTTCCEEEEES
T ss_pred CCCEEEEeCC-cHHHHHHHHHHH------------hcCCCEEEecC
Confidence 7899999999 899998877642 24689999997
No 45
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=55.90 E-value=83 Score=25.73 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=44.1
Q ss_pred EEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEE-EEEeCCchHHHHHhHh
Q 018199 49 LVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAV-IAVGGDGTLHEVVNGF 125 (359)
Q Consensus 49 ~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~i-vv~GGDGTv~evlngl 125 (359)
+.||. |+..-....++....|++. +..+++.+. .-..++...++++++..+++++| .++||.+-|--++-++
T Consensus 25 V~Iim----GS~SD~~v~~~a~~~L~~~-gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvvAa~ 98 (181)
T 4b4k_A 25 VGVIM----GSTSDWETMKYACDILDEL-NIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAK 98 (181)
T ss_dssp EEEEE----SSGGGHHHHHHHHHHHHHT-TCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHTT
T ss_pred EEEEE----CCHhHHHHHHHHHHHHHHc-CCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhHHhc
Confidence 66776 3333344566666677653 333333221 12345567777777766777765 5569999999999875
No 46
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=53.34 E-value=14 Score=34.81 Aligned_cols=59 Identities=7% Similarity=0.004 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 91 PSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 91 ~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
++...++++.+...+.|.+|++|||||+.-+.. |.+.. ......+++--||.==-||++
T Consensus 90 ~~~~~~~~~~l~~~~Id~Lv~IGGdgS~~~A~~-L~~~~-------~~~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 90 RREYERLIEVFKAHDIGYFFYNGGGDSADTCLK-VSQLS-------GTLGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEESHHHHHHHHH-HHHHH-------HHTTCCCEEEEEECCTTCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHH-HHHHH-------HHhCCCccEEEecccccCCCc
Confidence 344455566666778999999999999865543 33200 011346899999998889996
No 47
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=52.20 E-value=11 Score=36.91 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=38.7
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 94 AIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
...+++.+...+.|.+|++|||||+.-+.. |.+.- ......+++--||.==-||++
T Consensus 155 ~~~~~~~l~~~~Id~LvvIGGdgS~~~A~~-L~e~~-------~~~~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 155 YNKALFVAKENNLNAIIIIGGDDSNTNAAI-LAEYF-------KKNGENIQVIGVPKTIDADLR 210 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEESHHHHHHHHH-HHHHH-------HHTTCCCEEEEEEEETTCCCC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcHHHHHHH-HHHHH-------HHhCCCCcEEEeccccCCCCC
Confidence 334455555678999999999999865543 32210 012346999999998899996
No 48
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=50.76 E-value=1.5e+02 Score=27.86 Aligned_cols=75 Identities=19% Similarity=0.270 Sum_probs=47.0
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCC--EEEEEeCCchHHHHHh
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGAD--AVIAVGGDGTLHEVVN 123 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d--~ivv~GGDGTv~evln 123 (359)
.++.||.= +..-....++....|+. ++..+++.+. .-..+....++++++...+.. .|+++||.|.|--|+.
T Consensus 266 ~~V~Ii~g----s~SD~~~~~~a~~~l~~-~gi~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~Lpgvva 340 (425)
T 2h31_A 266 CRVVVLMG----STSDLGHCEKIKKACGN-FGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMS 340 (425)
T ss_dssp CEEEEEES----CGGGHHHHHHHHHHHHH-TTCCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHHH
T ss_pred CeEEEEec----CcccHHHHHHHHHHHHH-cCCceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccchHhHHh
Confidence 46777763 32234455666666664 3333333322 233556777888887777774 4566699999999999
Q ss_pred HhH
Q 018199 124 GFF 126 (359)
Q Consensus 124 gl~ 126 (359)
++.
T Consensus 341 ~~t 343 (425)
T 2h31_A 341 GNT 343 (425)
T ss_dssp HHC
T ss_pred ccC
Confidence 873
No 49
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=50.60 E-value=1.2e+02 Score=25.84 Aligned_cols=77 Identities=8% Similarity=0.009 Sum_probs=42.0
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch----HHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT----LHE 120 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT----v~e 120 (359)
.+.+.+++...+ ..-....++.+...+.+. ++++.+..+.. .....+..+.+...++|.||+.+.|.+ ..+
T Consensus 15 ~~~Igvi~~~~~-~~~~~~~~~gi~~~a~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~ 90 (298)
T 3tb6_A 15 NKTIGVLTTYIS-DYIFPSIIRGIESYLSEQ---GYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIG 90 (298)
T ss_dssp CCEEEEEESCSS-STTHHHHHHHHHHHHHHT---TCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHH
T ss_pred CceEEEEeCCCC-chHHHHHHHHHHHHHHHC---CCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHH
Confidence 366777665432 211122233333344432 45555444443 233445666677789999999998863 335
Q ss_pred HHhHhH
Q 018199 121 VVNGFF 126 (359)
Q Consensus 121 vlngl~ 126 (359)
.+..+.
T Consensus 91 ~~~~~~ 96 (298)
T 3tb6_A 91 YYLNLE 96 (298)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 50
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=50.55 E-value=96 Score=24.84 Aligned_cols=73 Identities=15% Similarity=0.239 Sum_probs=42.9
Q ss_pred cEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHc-CCCEE-EEEeCCchHHHHHhH
Q 018199 48 DLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKE-GADAV-IAVGGDGTLHEVVNG 124 (359)
Q Consensus 48 ~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~-~~d~i-vv~GGDGTv~evlng 124 (359)
++.||. |+..-....++....|+. ++..+++.+. .-..++...++++++..+ +.++| +++|+.+-|--++.+
T Consensus 4 ~V~Iim----gs~SD~~v~~~a~~~l~~-~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~LpgvvA~ 78 (159)
T 3rg8_A 4 LVIILM----GSSSDMGHAEKIASELKT-FGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFVDG 78 (159)
T ss_dssp EEEEEE----SSGGGHHHHHHHHHHHHH-TTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHHHH
T ss_pred eEEEEE----CcHHHHHHHHHHHHHHHH-cCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHHHh
Confidence 455555 322223455666666765 3333333321 133456677777776553 46665 455999999999998
Q ss_pred h
Q 018199 125 F 125 (359)
Q Consensus 125 l 125 (359)
+
T Consensus 79 ~ 79 (159)
T 3rg8_A 79 F 79 (159)
T ss_dssp H
T ss_pred c
Confidence 7
No 51
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=50.25 E-value=31 Score=28.44 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=36.4
Q ss_pred CCCCCcEEEEEcCC---CCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCc
Q 018199 43 SSRRRDLVFVVNPR---GASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDG 116 (359)
Q Consensus 43 ~~~~~~~~iiiNP~---SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDG 116 (359)
..++.++.||.--. .|. . ...-.-+...|++. +.......+..+..+...+..+++..+++|.|++.||=|
T Consensus 27 ~~~~~rvaIistGdEl~~G~-~-Dsn~~~L~~~L~~~-G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts 100 (185)
T 3rfq_A 27 ELVVGRALVVVVDDRTAHGD-E-DHSGPLVTELLTEA-GFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTG 100 (185)
T ss_dssp --CCEEEEEEEECHHHHTTC-C-CSHHHHHHHHHHHT-TEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred CCCCCEEEEEEECcccCCCC-c-CcHHHHHHHHHHHC-CCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 33455666665321 232 1 22222344556553 211222224455566666666665556799999999855
No 52
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=49.92 E-value=1.2e+02 Score=25.67 Aligned_cols=88 Identities=10% Similarity=0.007 Sum_probs=50.2
Q ss_pred CCCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCc-hHHHHHHHHHHHcCCCEEEEEeCCchHHH
Q 018199 43 SSRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGP-SHAIDITREAIKEGADAVIAVGGDGTLHE 120 (359)
Q Consensus 43 ~~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~-~~a~~~~~~~~~~~~d~ivv~GGDGTv~e 120 (359)
+.+.+.+.+++...+ ...|.++...+.+.+. .++++.+..+... ....+..+.+...++|.||+.+.+. .+
T Consensus 4 ~~~s~~Igvi~~~~~-----~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~ 76 (276)
T 3jy6_A 4 TQSSKLIAVIVANID-----DYFSTELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--PQ 76 (276)
T ss_dssp -CCCCEEEEEESCTT-----SHHHHHHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--HH
T ss_pred CCCCcEEEEEeCCCC-----chHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--HH
Confidence 455667777764321 2334444444443322 2455555554432 2334556666678899999999988 67
Q ss_pred HHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 121 VVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 121 vlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.++.+.. ..+|+-.+-.
T Consensus 77 ~~~~l~~-------------~~iPvV~i~~ 93 (276)
T 3jy6_A 77 TVQEILH-------------QQMPVVSVDR 93 (276)
T ss_dssp HHHHHHT-------------TSSCEEEESC
T ss_pred HHHHHHH-------------CCCCEEEEec
Confidence 7776642 4577766643
No 53
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=49.59 E-value=1.2e+02 Score=25.88 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=40.8
Q ss_pred CCCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHH
Q 018199 43 SSRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHE 120 (359)
Q Consensus 43 ~~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~e 120 (359)
+.+.+.+.+|+.-. . ...|.++...+.+.+. .++.+.+..+.. +....+..+.+...++|.||+.+.+.+ .+
T Consensus 13 ~~~s~~Igvi~~~~-~----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~ 86 (289)
T 2fep_A 13 SKKTTTVGVIIPDI-S----SIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNIT-DE 86 (289)
T ss_dssp ---CCEEEEEESCT-T----SHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCCC-HH
T ss_pred cCCCCeEEEEeCCC-C----CchHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCCC-HH
Confidence 45567788887432 1 1234444433333221 234444444433 223345566677788999999987755 44
Q ss_pred HHhHhH
Q 018199 121 VVNGFF 126 (359)
Q Consensus 121 vlngl~ 126 (359)
.+..+.
T Consensus 87 ~~~~l~ 92 (289)
T 2fep_A 87 HVAEFK 92 (289)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555553
No 54
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=47.87 E-value=1.2e+02 Score=25.86 Aligned_cols=89 Identities=11% Similarity=0.115 Sum_probs=47.1
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecC-CchHHHHHHHHHHHcCCCEEEEEeCCch-HHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTS-GPSHAIDITREAIKEGADAVIAVGGDGT-LHEVV 122 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~-~~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evl 122 (359)
.+++.+|+...+ ..-....++.+...+++. ++++.+. .+. ......+..+.+...++|.||+.+.|.+ +.+.+
T Consensus 4 ~~~I~~i~~~~~-~~~~~~~~~gi~~~a~~~---g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~ 79 (305)
T 3g1w_A 4 NETYMMITFQSG-MDYWKRCLKGFEDAAQAL---NVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTI 79 (305)
T ss_dssp -CEEEEEESSTT-STHHHHHHHHHHHHHHHH---TCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHH
T ss_pred CceEEEEEccCC-ChHHHHHHHHHHHHHHHc---CCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHH
Confidence 456666664432 222122233333333332 3444432 232 2233445566677789999999998875 45667
Q ss_pred hHhHhCCccccccccccCCcceEEEeeCc
Q 018199 123 NGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 123 ngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
..+.. ..+|+..+-..
T Consensus 80 ~~~~~-------------~~iPvV~~~~~ 95 (305)
T 3g1w_A 80 NKAVD-------------AGIPIVLFDSG 95 (305)
T ss_dssp HHHHH-------------TTCCEEEESSC
T ss_pred HHHHH-------------CCCcEEEECCC
Confidence 66643 34677666443
No 55
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=47.77 E-value=1.1e+02 Score=24.58 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=32.5
Q ss_pred CCCCCcEEEEEcCC---------------CCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHH
Q 018199 43 SSRRRDLVFVVNPR---------------GASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIK 103 (359)
Q Consensus 43 ~~~~~~~~iiiNP~---------------SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~ 103 (359)
..+++.+.+|+|-. ..+..+..-.+.+...++.. ++++.++.--...+..+.++++..
T Consensus 19 ~~~~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~L---gF~V~~~~dlt~~em~~~l~~~~~ 91 (164)
T 1qtn_A 19 KSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEEL---HFEIKPHDDCTVEQIYEILKIYQL 91 (164)
T ss_dssp CCSSCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHC---CCEEEEecCCCHHHHHHHHHHHHH
Confidence 45567888888842 12222233345555566543 355665555566677777777654
No 56
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=47.39 E-value=1.1e+02 Score=27.20 Aligned_cols=80 Identities=5% Similarity=-0.008 Sum_probs=46.5
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNG 124 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlng 124 (359)
..+++.+|..... -+....+.+...+++... .+...........+....+.++...++|+|++++-|.....++..
T Consensus 140 g~~~iaii~~~~~---~g~~~~~~~~~~~~~~G~-~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~ 215 (364)
T 3lop_A 140 GVTRIGVLYQEDA---LGKEAITGVERTLKAHAL-AITAMASYPRNTANVGPAVDKLLAADVQAIFLGATAEPAAQFVRQ 215 (364)
T ss_dssp TCCCEEEEEETTH---HHHHHHHHHHHHHHTTTC-CCSEEEEECTTSCCCHHHHHHHHHSCCSEEEEESCHHHHHHHHHH
T ss_pred CCceEEEEEeCch---hhHHHHHHHHHHHHHcCC-cEEEEEEecCCCccHHHHHHHHHhCCCCEEEEecCcHHHHHHHHH
Confidence 4578999876431 122233444555555321 121122223333445556667667789999998877778888888
Q ss_pred hHhC
Q 018199 125 FFSA 128 (359)
Q Consensus 125 l~~~ 128 (359)
+.+.
T Consensus 216 ~~~~ 219 (364)
T 3lop_A 216 YRAR 219 (364)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 7653
No 57
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=46.97 E-value=38 Score=30.43 Aligned_cols=66 Identities=17% Similarity=0.096 Sum_probs=35.3
Q ss_pred EEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC------CchH----HHHHHHHHHHcCCCEEEEE-eCCch
Q 018199 49 LVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS------GPSH----AIDITREAIKEGADAVIAV-GGDGT 117 (359)
Q Consensus 49 ~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~------~~~~----a~~~~~~~~~~~~d~ivv~-GGDGT 117 (359)
-.-|+.|.|+-. ...+++....|++. ++++..-.+. ..++ |.++.+.+...+.|+|+++ ||+|+
T Consensus 19 ~I~ivaPSs~~~--~~~~~~~~~~L~~~---G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 93 (311)
T 1zl0_A 19 RVALIAPASAIA--TDVLEATLRQLEVH---GVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp EEEEECCSBCCC--HHHHHHHHHHHHHT---TCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred EEEEEeCCCCCC--HHHHHHHHHHHHhC---CCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH
Confidence 355689988653 34456666677763 3444321111 1222 3333333344566777665 99998
Q ss_pred HH
Q 018199 118 LH 119 (359)
Q Consensus 118 v~ 119 (359)
..
T Consensus 94 ~r 95 (311)
T 1zl0_A 94 GQ 95 (311)
T ss_dssp GG
T ss_pred HH
Confidence 63
No 58
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=46.92 E-value=98 Score=27.29 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=37.4
Q ss_pred CCcEEEEEc--CCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCC
Q 018199 46 RRDLVFVVN--PRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGD 115 (359)
Q Consensus 46 ~~~~~iiiN--P~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGD 115 (359)
..++.+|+. +.....-....++.+...+++. ++++.+..+....+..+..+.+...++|.|+++|..
T Consensus 4 ~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~---g~~~~~~~~~~~~~~~~~l~~l~~~~~dgIi~~~~~ 72 (318)
T 2fqx_A 4 DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQEN---NAKCKYVTASTDAEYVPSLSAFADENMGLVVACGSF 72 (318)
T ss_dssp CCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHT---TCEEEEEECCSGGGHHHHHHHHHHTTCSEEEEESTT
T ss_pred CcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHh---CCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEECChh
Confidence 457888885 4322111122333344444432 345544455544455566777777889999998753
No 59
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=46.71 E-value=57 Score=28.70 Aligned_cols=28 Identities=11% Similarity=0.129 Sum_probs=22.5
Q ss_pred CCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 105 GADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 105 ~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
..|.+|..|| +|+.|++. ...|.-++|.
T Consensus 225 ~aDlvI~~gG-~T~~E~~~-----------------~g~P~i~ip~ 252 (282)
T 3hbm_A 225 ESNKLIISAS-SLVNEALL-----------------LKANFKAICY 252 (282)
T ss_dssp TEEEEEEESS-HHHHHHHH-----------------TTCCEEEECC
T ss_pred HCCEEEECCc-HHHHHHHH-----------------cCCCEEEEeC
Confidence 5789999999 99999985 2467778885
No 60
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=45.80 E-value=15 Score=38.24 Aligned_cols=61 Identities=20% Similarity=0.328 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCEEEEEeCCchHHHHHh----------HhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 96 DITREAIKEGADAVIAVGGDGTLHEVVN----------GFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 96 ~~~~~~~~~~~d~ivv~GGDGTv~evln----------gl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
..+..+...+.|.+|++|||||+.-+.. .|.++++. ..........+++.-||.==-||++
T Consensus 295 ~~~~~L~~~gId~LvvIGGDGS~~gA~~L~~e~~~l~~eL~~~gkl-s~~~~~~~~~i~VVGIPkTIDNDl~ 365 (989)
T 3opy_A 295 QACYNMVSNGIDALVVCGGDGSLTGADLFRKEWPELIKELLGEDKI-TKEQYETHRNLTIVGLVGSIDNDMC 365 (989)
T ss_dssp HHHHHHHHTTCCEEEEEECHHHHHHHHHHHHHTTCCCCC---------CHHHHHTTSCEEEEEEEESSCCCT
T ss_pred HHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHhhHHHHHHHHcccc-chhhhhccCCCcEEEEeecccCCCC
Confidence 4455566678999999999999876542 11111000 0000001246899999998889987
No 61
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=44.86 E-value=15 Score=38.32 Aligned_cols=61 Identities=18% Similarity=0.316 Sum_probs=36.2
Q ss_pred HHHHHHHcCCCEEEEEeCCchHHHHHh----------HhHhCCccccccccccCCcceEEEeeCcChhhhhh
Q 018199 97 ITREAIKEGADAVIAVGGDGTLHEVVN----------GFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFAR 158 (359)
Q Consensus 97 ~~~~~~~~~~d~ivv~GGDGTv~evln----------gl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar 158 (359)
.++.+...+.|.+|++|||||+.-+.. .|.+.++ +..........+++.-||.==-||++-
T Consensus 268 ~~~~L~~~gId~LvvIGGDGS~~gA~~l~~e~~~l~~eL~~~gk-is~e~~~~~~~i~VVGIPkTIDNDl~g 338 (941)
T 3opy_B 268 ACKNMIDMGIDALIVCGGDGSLTGADRFRSEWPSLIEELLQTEQ-ISQQQFNTHQNLNICGAVGSIDNDMSS 338 (941)
T ss_dssp HHHHHHHHTCCEEEEEECHHHHHHHHHHHHTCCCCCCC---------CHHHHHTCSCEEEEEEEESSCCCSS
T ss_pred HHHHHHHcCCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhhcc-ccHHHHhcCCCCcEEEEeecccCCCCC
Confidence 444556678999999999999986532 1111000 000000112468899999888888874
No 62
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=44.69 E-value=77 Score=28.53 Aligned_cols=78 Identities=13% Similarity=0.152 Sum_probs=46.6
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceE--EEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNIC--ESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~--~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
..+++.+|..... -+....+.+...+++. +..+. ........+....+.++...++|+|++++-|.....++
T Consensus 142 g~~~iaii~~~~~---~g~~~~~~~~~~l~~~---G~~v~~~~~~~~~~~d~~~~~~~l~~~~~dav~~~~~~~~a~~~~ 215 (392)
T 3lkb_A 142 KGAKVALVVHPSP---FGRAPVEDARKAAREL---GLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANIL 215 (392)
T ss_dssp TTCEEEEEECSSH---HHHTTHHHHHHHHHHH---TCEEEEEEECCTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCCEEEEEEeCCc---hhhhHHHHHHHHHHHc---CCeEEEEEeeCCCCcCHHHHHHHHHhcCCCEEEEecCcchHHHHH
Confidence 4588999885432 1222334445555553 22222 12222333455566666677899999999888888888
Q ss_pred hHhHhC
Q 018199 123 NGFFSA 128 (359)
Q Consensus 123 ngl~~~ 128 (359)
..+.+.
T Consensus 216 ~~~~~~ 221 (392)
T 3lkb_A 216 KDAKRL 221 (392)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 887654
No 63
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=44.45 E-value=52 Score=26.81 Aligned_cols=45 Identities=27% Similarity=0.474 Sum_probs=30.6
Q ss_pred HHHHHHHHHHcCCCEEEEEeC-CchHHHHHhHhHhCCccccccccccCCcceEEEeeCc
Q 018199 94 AIDITREAIKEGADAVIAVGG-DGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GG-DGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
|+++++.+...++ .||.-|| -|-...+..+.++.+ ...+|+||..
T Consensus 34 A~~lg~~La~~g~-~lVsGGg~~Gim~aa~~gAl~~g------------G~tigVlP~~ 79 (176)
T 2iz6_A 34 ANELGKQIATHGW-ILLTGGRSLGVMHEAMKGAKEAG------------GTTIGVLPGP 79 (176)
T ss_dssp HHHHHHHHHHTTC-EEEEECSSSSHHHHHHHHHHHTT------------CCEEEEECC-
T ss_pred HHHHHHHHHHCCC-EEEECCCccCHhHHHHHHHHHcC------------CEEEEEeCch
Confidence 4555666555444 5556666 799999999887643 4689999976
No 64
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=43.90 E-value=1.2e+02 Score=27.66 Aligned_cols=94 Identities=6% Similarity=-0.025 Sum_probs=44.8
Q ss_pred CCCCCCCcEEEEEcCCC-C-CCchhhhHHHHHHHHHhccccccceEEEecCCc-hHHHHHHHHHHHcCCCEEEEEeCCch
Q 018199 41 ASSSRRRDLVFVVNPRG-A-SGRTGKEWKKLLPYLRSRLSVDCNICESLTSGP-SHAIDITREAIKEGADAVIAVGGDGT 117 (359)
Q Consensus 41 ~~~~~~~~~~iiiNP~S-G-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~-~~a~~~~~~~~~~~~d~ivv~GGDGT 117 (359)
+.+.+..++.+|+ |.. + ++=....++-+....++ ++..+++....+... .+..+..+++..+++|.|++.|..
T Consensus 21 ~~~~~~~kIglv~-~g~i~D~~f~~~~~~G~~~~~~~-~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g~~-- 96 (356)
T 3s99_A 21 SMAEEKLKVGFIY-IGPPGDFGWTYQHDQARKELVEA-LGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTSFG-- 96 (356)
T ss_dssp -----CEEEEEEC-SSCGGGSSHHHHHHHHHHHHHHH-HTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECSGG--
T ss_pred cccCCCCEEEEEE-ccCCCchhHHHHHHHHHHHHHHH-hCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECCHH--
Confidence 3445567888888 421 1 11112223333333222 221134433343332 355667788888899988877532
Q ss_pred HHHHHhHhHhCCccccccccccCCcceEEEee
Q 018199 118 LHEVVNGFFSAGKLVTNHNRESAHSTALGLIP 149 (359)
Q Consensus 118 v~evlngl~~~~~~~~~~~~~~~~~~~lgiiP 149 (359)
..+.+..+... .+++++.++-
T Consensus 97 ~~~~~~~vA~~-----------~Pdv~fv~id 117 (356)
T 3s99_A 97 YMDPTVKVAKK-----------FPDVKFEHAT 117 (356)
T ss_dssp GHHHHHHHHTT-----------CTTSEEEEES
T ss_pred HHHHHHHHHHH-----------CCCCEEEEEe
Confidence 33444444321 2467787773
No 65
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=43.86 E-value=76 Score=27.18 Aligned_cols=79 Identities=13% Similarity=0.215 Sum_probs=42.6
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhcccc--ccceEEEec----CCchHHHHHHHHHHHcCCCEEEEEeCCch
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSV--DCNICESLT----SGPSHAIDITREAIKEGADAVIAVGGDGT 117 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~--~~~~~~~~t----~~~~~a~~~~~~~~~~~~d~ivv~GGDGT 117 (359)
.+.+++.+++.-.... ..|.++...+++.... ++.+.+..+ ..+....+..+.+...++|.||+.+-|..
T Consensus 6 ~~~~~Igvi~~~~~~~----~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~ 81 (304)
T 3gbv_A 6 NKKYTFACLLPKHLEG----EYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQ 81 (304)
T ss_dssp -CCEEEEEEEECCCTT----SHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGG
T ss_pred CCcceEEEEecCCCCc----hHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChH
Confidence 4456677766543122 2344444444333221 344444332 13333345566677789999999998874
Q ss_pred -HHHHHhHhH
Q 018199 118 -LHEVVNGFF 126 (359)
Q Consensus 118 -v~evlngl~ 126 (359)
..+.++.+.
T Consensus 82 ~~~~~~~~~~ 91 (304)
T 3gbv_A 82 YTKGFTDALN 91 (304)
T ss_dssp GTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 456666664
No 66
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=43.79 E-value=1.5e+02 Score=25.12 Aligned_cols=47 Identities=15% Similarity=-0.017 Sum_probs=28.3
Q ss_pred ccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch-HHHHHhHhH
Q 018199 80 DCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT-LHEVVNGFF 126 (359)
Q Consensus 80 ~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evlngl~ 126 (359)
++++.+..+.. +....+..+.+...++|.||+.+.|.+ ..+.+..+.
T Consensus 32 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~ 80 (290)
T 2fn9_A 32 GYEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAK 80 (290)
T ss_dssp TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHH
Confidence 34554444432 333345566677788999999987754 345565553
No 67
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=42.89 E-value=67 Score=29.22 Aligned_cols=73 Identities=16% Similarity=0.080 Sum_probs=39.0
Q ss_pred CCcEEEEEcCCCCCCc---hhhhHHHHHHHHHhccccccceEEEecCCch----------HHHHHHHHHHHcCCCEEEEE
Q 018199 46 RRDLVFVVNPRGASGR---TGKEWKKLLPYLRSRLSVDCNICESLTSGPS----------HAIDITREAIKEGADAVIAV 112 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~---~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~----------~a~~~~~~~~~~~~d~ivv~ 112 (359)
|..-.-|+.|.|+-.. ....+++....|++. ++++....+.... -|.++.+.+...+.++|+++
T Consensus 4 ~~D~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~---G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~ 80 (346)
T 4eys_A 4 MVSTIGIVSLSSGIIGEDFVKHEVDLGIQRLKDL---GLNPIFLPHSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCA 80 (346)
T ss_dssp CCCEEEEECSSCCGGGSGGGHHHHHHHHHHHHHT---TCEEEECTTTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEEC
T ss_pred cCcEEEEEeCCCcccccccCHHHHHHHHHHHHhC---CCEEEECCchhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEc
Confidence 4455667899886421 123445555667653 3444432222221 22233333334577888776
Q ss_pred -eCCchHHHH
Q 018199 113 -GGDGTLHEV 121 (359)
Q Consensus 113 -GGDGTv~ev 121 (359)
||+|+..-+
T Consensus 81 rGG~g~~rlL 90 (346)
T 4eys_A 81 IGGDDTYRLL 90 (346)
T ss_dssp CCCSCGGGGH
T ss_pred ccccCHHHHH
Confidence 999986533
No 68
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=42.86 E-value=49 Score=27.33 Aligned_cols=45 Identities=22% Similarity=0.497 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHcCCCEEEEEe-CC-chHHHHHhHhHhCCccccccccccCCcceEEEeeCc
Q 018199 93 HAIDITREAIKEGADAVIAVG-GD-GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~G-GD-GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
.|+++.+.+...++ .|+.| |. |-...+..+.++.+ ...+|++|.+
T Consensus 21 ~A~~lg~~La~~g~--~lV~GGg~~GiM~aa~~gA~~~g------------G~~iGv~p~~ 67 (191)
T 1t35_A 21 KAAELGVYMAEQGI--GLVYGGSRVGLMGTIADAIMENG------------GTAIGVMPSG 67 (191)
T ss_dssp HHHHHHHHHHHTTC--EEEECCCCSHHHHHHHHHHHTTT------------CCEEEEEETT
T ss_pred HHHHHHHHHHHCCC--EEEECCCcccHHHHHHHHHHHcC------------CeEEEEeCch
Confidence 35566666665543 45555 55 99999999987543 4689999986
No 69
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=42.79 E-value=1.4e+02 Score=25.26 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=43.5
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHh
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGF 125 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl 125 (359)
.+++.+|-.+..- ..++.+...|. .++..+.-.+++++.+..+++..+++++|| ||+++.+.+..+
T Consensus 106 ~~kIavVg~~~~~-----~~~~~i~~ll~------~~i~~~~~~~~ee~~~~i~~l~~~G~~vVV---G~~~~~~~A~~~ 171 (225)
T 2pju_A 106 TSSIGVVTYQETI-----PALVAFQKTFN------LRLDQRSYITEEDARGQINELKANGTEAVV---GAGLITDLAEEA 171 (225)
T ss_dssp TSCEEEEEESSCC-----HHHHHHHHHHT------CCEEEEEESSHHHHHHHHHHHHHTTCCEEE---ESHHHHHHHHHT
T ss_pred CCcEEEEeCchhh-----hHHHHHHHHhC------CceEEEEeCCHHHHHHHHHHHHHCCCCEEE---CCHHHHHHHHHc
Confidence 3588888776642 11223333332 344455566778899999999999999877 578887777643
No 70
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=42.59 E-value=68 Score=27.09 Aligned_cols=15 Identities=7% Similarity=0.138 Sum_probs=8.6
Q ss_pred CCCCCCcEEEEE-cCC
Q 018199 42 SSSRRRDLVFVV-NPR 56 (359)
Q Consensus 42 ~~~~~~~~~iii-NP~ 56 (359)
++..|+++++|. .|.
T Consensus 21 ~~~~M~kiLiI~gsp~ 36 (218)
T 3rpe_A 21 QSNAMSNVLIINAMKE 36 (218)
T ss_dssp ---CCCCEEEEECCCC
T ss_pred ccccCcceEEEEeCCC
Confidence 455678888776 664
No 71
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=42.26 E-value=47 Score=27.45 Aligned_cols=45 Identities=20% Similarity=0.253 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCCEEEEEeCC-chHHHHHhHhHhCCccccccccccCCcceEEEeeCc
Q 018199 94 AIDITREAIKEGADAVIAVGGD-GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGD-GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
|+++.+.+...++ .||.-||. |-...+..+..+.+ ...+|++|--
T Consensus 33 A~~lg~~la~~g~-~lv~GGG~~GlM~a~~~ga~~~G------------G~viGv~p~~ 78 (189)
T 3sbx_A 33 AGAVGAAIAARGW-TLVWGGGHVSAMGAVSSAARAHG------------GWTVGVIPKM 78 (189)
T ss_dssp HHHHHHHHHHTTC-EEEECCBCSHHHHHHHHHHHTTT------------CCEEEEEETT
T ss_pred HHHHHHHHHHCCC-EEEECCCccCHHHHHHHHHHHcC------------CcEEEEcCch
Confidence 4555566555544 33334457 99999999987543 4689999974
No 72
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=42.24 E-value=84 Score=27.21 Aligned_cols=57 Identities=23% Similarity=0.229 Sum_probs=39.4
Q ss_pred HHHHHHHHHcCCCEEEEEeCC----chHHHHHhHhHhCCccccccccccCCcceEEEeeCcCh-hhhhhhcCCCC
Q 018199 95 IDITREAIKEGADAVIAVGGD----GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTG-SDFARTFGWRN 164 (359)
Q Consensus 95 ~~~~~~~~~~~~d~ivv~GGD----GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTg-N~~Ar~lg~~~ 164 (359)
.+.+.+...++-+++++.+|| |+..+++..+.. ..+++=++|.=|. ...|..+|+|.
T Consensus 66 ~~~i~~~~~~G~~Va~L~~GDP~iyg~~~~l~~~l~~-------------~gi~veviPGiSs~~aaaA~lG~pl 127 (264)
T 3ndc_A 66 IDTIAEAHAAGQDVARLHSGDLSIWSAMGEQLRRLRA-------------LNIPYDVTPGVPSFAAAAATLGAEL 127 (264)
T ss_dssp HHHHHHHHHHTCCEEEEESBCTTSSCSHHHHHHHHHH-------------TTCCEEEECCCCHHHHHHHHHTCCS
T ss_pred HHHHHHHHHCCCeEEEEeCCCCccccHHHHHHHHHHh-------------CCCCEEEeCCHHHHHHHHHHhCCCc
Confidence 334444455678899999999 666677766632 3578999998654 66667778774
No 73
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=42.10 E-value=1.3e+02 Score=24.05 Aligned_cols=31 Identities=16% Similarity=0.197 Sum_probs=21.9
Q ss_pred EecCCchHHHHHHHHHHHc-CCCEEEEEeCCc
Q 018199 86 SLTSGPSHAIDITREAIKE-GADAVIAVGGDG 116 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~~-~~d~ivv~GGDG 116 (359)
+..+..+...+..+++..+ ++|.|++.||=|
T Consensus 49 iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g 80 (172)
T 1mkz_A 49 IVKENRYAIRAQVSAWIASDDVQVVLITGGTG 80 (172)
T ss_dssp EECSCHHHHHHHHHHHHHSSSCCEEEEESCCS
T ss_pred EeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 4455656666666666654 599999999965
No 74
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=41.84 E-value=1.2e+02 Score=26.18 Aligned_cols=76 Identities=8% Similarity=0.041 Sum_probs=43.8
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNG 124 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlng 124 (359)
..|++.+|.+|... .+....+.....+++. ++++.........+..+.++++. .++|+|++ ..|.+.-.++..
T Consensus 132 g~~~I~~i~~~~~~--~~~~r~~g~~~al~~~---gi~~~~~~~~~~~~~~~~~~~l~-~~~dai~~-~~D~~a~g~~~~ 204 (295)
T 3lft_A 132 NVKTIGALYSSSED--NSKTQVEEFKAYAEKA---GLTVETFAVPSTNEIASTVTVMT-SKVDAIWV-PIDNTIASGFPT 204 (295)
T ss_dssp TCCEEEEEEETTCH--HHHHHHHHHHHHHHHT---TCEEEEEEESSGGGHHHHHHHHT-TTCSEEEE-CSCHHHHHTHHH
T ss_pred CCcEEEEEeCCCCc--chHHHHHHHHHHHHHc---CCEEEEEecCCHHHHHHHHHHHH-hcCCEEEE-CCchhHHHHHHH
Confidence 56899999998531 1223334445555543 23333222233445666666654 56887765 578887766666
Q ss_pred hHh
Q 018199 125 FFS 127 (359)
Q Consensus 125 l~~ 127 (359)
+..
T Consensus 205 l~~ 207 (295)
T 3lft_A 205 VVS 207 (295)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 75
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=41.44 E-value=1.4e+02 Score=24.02 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=35.7
Q ss_pred CCCCCcEEEEEcCCCC--------CCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHH----cCCCEEE
Q 018199 43 SSRRRDLVFVVNPRGA--------SGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIK----EGADAVI 110 (359)
Q Consensus 43 ~~~~~~~~iiiNP~SG--------~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~----~~~d~iv 110 (359)
..+++.+.+|+|-..= +..+..-.+.+...++.. ++++.++.--...+..+.++++.. ..+|.+|
T Consensus 29 ~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~L---gF~V~~~~dlt~~em~~~l~~~~~~~dh~~~dc~v 105 (167)
T 1pyo_A 29 QSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLL---GYDVHVLCDQTAQEMQEKLQNFAQLPAHRVTDSCI 105 (167)
T ss_dssp CCSSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHT---TEEEEEEESCCHHHHHHHHHHHHTCGGGGTSSEEE
T ss_pred CCCCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHC---CCEEEEeeCCCHHHHHHHHHHhhhhhhccCCCEEE
Confidence 4566888888876521 111222344555566543 355655555556677777776654 3456443
No 76
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=40.64 E-value=61 Score=29.23 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=35.0
Q ss_pred EEEEEcCCCCCCc-hhhhHHHHHHHHHhccccccceEEEecC------Cch----HHHHHHHHHHHcCCCEEEEE-eCCc
Q 018199 49 LVFVVNPRGASGR-TGKEWKKLLPYLRSRLSVDCNICESLTS------GPS----HAIDITREAIKEGADAVIAV-GGDG 116 (359)
Q Consensus 49 ~~iiiNP~SG~g~-~~~~~~~~~~~l~~~~~~~~~~~~~~t~------~~~----~a~~~~~~~~~~~~d~ivv~-GGDG 116 (359)
-.-|+-|.|+-+. ....+++....|++. ++++..-.+. ..+ -|.++.+.+...+.++|+++ ||+|
T Consensus 14 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~---G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 90 (327)
T 4h1h_A 14 EIRIIAPSRSIGIMADNQVEIAVNRLTDM---GFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFN 90 (327)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHT---TCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred EEEEEeCCCCcCccCHHHHHHHHHHHHhC---CCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchh
Confidence 3445788876432 233455555667653 2333321111 112 23344333444567788776 9999
Q ss_pred hHH
Q 018199 117 TLH 119 (359)
Q Consensus 117 Tv~ 119 (359)
+..
T Consensus 91 ~~r 93 (327)
T 4h1h_A 91 SNQ 93 (327)
T ss_dssp GGG
T ss_pred HHH
Confidence 864
No 77
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=39.89 E-value=38 Score=28.00 Aligned_cols=38 Identities=32% Similarity=0.419 Sum_probs=25.3
Q ss_pred CCCEEEEE-eCCchHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 105 GADAVIAV-GGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 105 ~~d~ivv~-GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
..|++|++ ||=||+.|+...+-... ....+.|+.++..
T Consensus 97 ~sda~IvlPGG~GTl~El~e~lt~~q--------~g~~~kPvvll~~ 135 (191)
T 1t35_A 97 LADGFISMPGGFGTYEELFEVLCWAQ--------IGIHQKPIGLYNV 135 (191)
T ss_dssp HCSEEEECSCCHHHHHHHHHHHHTTS--------CSSCCCCEEEECG
T ss_pred HCCEEEEeCCCccHHHHHHHHHHHHH--------hCCCCCCEEEecC
Confidence 35665555 89999999999884321 1124578888854
No 78
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=39.63 E-value=33 Score=34.93 Aligned_cols=62 Identities=21% Similarity=0.352 Sum_probs=38.7
Q ss_pred HHHHHHHHHcCCCEEEEEeCCchHHHHH----------hHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 95 IDITREAIKEGADAVIAVGGDGTLHEVV----------NGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 95 ~~~~~~~~~~~~d~ivv~GGDGTv~evl----------ngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
.+.++.+...+.|.+|++|||||+.-+. ..|.+.++ +..........+++--||.==-||++
T Consensus 99 ~~~~~~l~~~~Id~LvvIGGdgS~~gA~~l~~e~~~ll~eL~~~g~-i~~~~~~~~~~i~vVGIPkTIDNDl~ 170 (762)
T 3o8l_A 99 LRAAHNLVKRGITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGK-ITAEEATRSSYLNIVGLVGSIDNDFC 170 (762)
T ss_dssp HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHTTHHHHHHTTTTTS-CTTTGGGSTTCCEEEEEEBCTTCCCS
T ss_pred HHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHhHHHHHHHHhccc-hhHHHHhcCCCCCeEEeecCcccCCC
Confidence 3445556667899999999999997654 22222110 00001112346889999988888987
No 79
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=39.18 E-value=54 Score=27.70 Aligned_cols=43 Identities=28% Similarity=0.556 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCCEEEEEeCC-chHHHHHhHhHhCCccccccccccCCcceEEEee
Q 018199 94 AIDITREAIKEGADAVIAVGGD-GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIP 149 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGD-GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP 149 (359)
|+++.+.+...++ .||.-||. |-.-.+..+.++.+ ...+|++|
T Consensus 30 A~~lg~~LA~~g~-~lV~GGg~~GlM~aa~~gA~~~G------------G~~iGv~p 73 (216)
T 1ydh_A 30 AIELGNELVKRKI-DLVYGGGSVGLMGLISRRVYEGG------------LHVLGIIP 73 (216)
T ss_dssp HHHHHHHHHHTTC-EEEECCCSSHHHHHHHHHHHHTT------------CCEEEEEE
T ss_pred HHHHHHHHHHCCC-EEEECCCcccHhHHHHHHHHHcC------------CcEEEEec
Confidence 4455565555544 45555676 89988888887543 47899999
No 80
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=38.83 E-value=1.4e+02 Score=23.84 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=20.9
Q ss_pred EecCCchHHHHHHHHHHH-cCCCEEEEEeCCc
Q 018199 86 SLTSGPSHAIDITREAIK-EGADAVIAVGGDG 116 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~-~~~d~ivv~GGDG 116 (359)
+..+..+...+..+++.. +++|.|++.||=|
T Consensus 52 iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g 83 (169)
T 1y5e_A 52 IVKDDKESIQQAVLAGYHKEDVDVVLTNGGTG 83 (169)
T ss_dssp EECSSHHHHHHHHHHHHTCTTCSEEEEECCCS
T ss_pred EeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 445555555566666554 2799999999965
No 81
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=38.71 E-value=1.6e+02 Score=25.10 Aligned_cols=76 Identities=13% Similarity=0.248 Sum_probs=40.2
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
+.+++.+++. ... ...|.++...+.+.+. .++++.+..+.. +....+..+.+...++|.||+.+.+.+-.+++
T Consensus 19 ~~~~Ig~i~~-~~~----~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~ 93 (293)
T 2iks_A 19 RTRSIGLVIP-DLE----NTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFY 93 (293)
T ss_dssp CCCEEEEEES-CSC----SHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSCTTCHHH
T ss_pred CCcEEEEEeC-CCc----CcHHHHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcHHHH
Confidence 3456777764 321 1234444444433221 234554444443 23334556667778899999998876543344
Q ss_pred hHh
Q 018199 123 NGF 125 (359)
Q Consensus 123 ngl 125 (359)
..+
T Consensus 94 ~~~ 96 (293)
T 2iks_A 94 QRW 96 (293)
T ss_dssp HTT
T ss_pred HHH
Confidence 444
No 82
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=38.51 E-value=1.2e+02 Score=25.37 Aligned_cols=74 Identities=8% Similarity=0.147 Sum_probs=38.2
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
.+++.+++.-.+ ...|.++...+.+.+. .++.+.+..+.. +....+..+.+...++|.||+.+.|.+ .+.+.
T Consensus 3 s~~Ig~i~~~~~-----~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~ 76 (275)
T 3d8u_A 3 AYSIALIIPSLF-----EKACAHFLPSFQQALNKAGYQLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEHS-QRTHQ 76 (275)
T ss_dssp -CEEEEEESCSS-----CHHHHHHHHHHHHHHHHTSCEECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSCCC-HHHHH
T ss_pred ceEEEEEeCCCc-----cccHHHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCC-HHHHH
Confidence 456777764321 1234444443333221 234443333432 233345566666788999999988765 35555
Q ss_pred Hh
Q 018199 124 GF 125 (359)
Q Consensus 124 gl 125 (359)
.+
T Consensus 77 ~l 78 (275)
T 3d8u_A 77 LL 78 (275)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 83
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=38.12 E-value=94 Score=26.60 Aligned_cols=75 Identities=12% Similarity=0.075 Sum_probs=41.3
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
.+.+.+.+++ ..+ ...|.++...+.+.+. .++.+.+..+....+..+..+.+...++|.||+.+.|.+- +.+
T Consensus 10 ~~~~~Igvi~-~~~-----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~ 82 (289)
T 3k9c_A 10 ASSRLLGVVF-ELQ-----QPFHGDLVEQIYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFDT-DEL 82 (289)
T ss_dssp ---CEEEEEE-ETT-----CHHHHHHHHHHHHHHHHTTCEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCCCCH-HHH
T ss_pred CCCCEEEEEE-ecC-----CchHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEECCCCCH-HHH
Confidence 4456788888 432 1234444433333221 2455554444443334556666667789999999988765 555
Q ss_pred hHh
Q 018199 123 NGF 125 (359)
Q Consensus 123 ngl 125 (359)
..+
T Consensus 83 ~~~ 85 (289)
T 3k9c_A 83 GAL 85 (289)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 84
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=38.09 E-value=1.7e+02 Score=25.70 Aligned_cols=79 Identities=9% Similarity=0.038 Sum_probs=46.0
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceE--EEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNIC--ESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~--~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
..+++.+|.. ... .+....+.+...+++. ++.+. ........+....++++...++|+|++++.|.....++
T Consensus 138 g~~~ia~i~~-~~~--~g~~~~~~~~~~l~~~---g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~ 211 (368)
T 4eyg_A 138 GIKKVATLTS-DYA--PGNDALAFFKERFTAG---GGEIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGNFM 211 (368)
T ss_dssp TCCEEEEEEE-SSH--HHHHHHHHHHHHHHHT---TCEEEEEEEECSSSCCCHHHHHHHHHHCCSEEEEECCTTCHHHHH
T ss_pred CCCEEEEEec-Cch--HhHHHHHHHHHHHHHc---CCEEEEEEeCCCCCCcHHHHHHHHHhcCCCEEEEeccchHHHHHH
Confidence 4578888873 221 1222233444555543 22222 12222233445566666667899999988888888899
Q ss_pred hHhHhCC
Q 018199 123 NGFFSAG 129 (359)
Q Consensus 123 ngl~~~~ 129 (359)
+.+.+.+
T Consensus 212 ~~~~~~g 218 (368)
T 4eyg_A 212 KQFAERG 218 (368)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 8886543
No 85
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=37.91 E-value=59 Score=27.11 Aligned_cols=45 Identities=20% Similarity=0.417 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCEEEEEeCC-chHHHHHhHhHhCCccccccccccCCcceEEEeeCc
Q 018199 94 AIDITREAIKEGADAVIAVGGD-GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGD-GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
|+++.+.+...++ .||.-||. |-...+..+.++.+ ...+|++|..
T Consensus 42 A~~lg~~La~~g~-~lV~GGG~~GlM~a~~~gA~~~G------------G~viGv~p~~ 87 (199)
T 3qua_A 42 AAEVGSSIAARGW-TLVSGGGNVSAMGAVAQAARAKG------------GHTVGVIPKA 87 (199)
T ss_dssp HHHHHHHHHHTTC-EEEECCBCSHHHHHHHHHHHHTT------------CCEEEEEEGG
T ss_pred HHHHHHHHHHCCC-EEEECCCccCHHHHHHHHHHHcC------------CcEEEEeCch
Confidence 4555566555544 34444566 99999999987543 4689999974
No 86
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=37.76 E-value=51 Score=27.28 Aligned_cols=66 Identities=14% Similarity=0.127 Sum_probs=43.2
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHh
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGF 125 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl 125 (359)
.+++.++-.+..-.+ .+.+...|. .++..+.-.+++++.+..+++..+++++|| ||+++.+.+..+
T Consensus 94 ~~kIavvg~~~~~~~-----~~~~~~ll~------~~i~~~~~~~~~e~~~~i~~l~~~G~~vvV---G~~~~~~~A~~~ 159 (196)
T 2q5c_A 94 GNELALIAYKHSIVD-----KHEIEAMLG------VKIKEFLFSSEDEITTLISKVKTENIKIVV---SGKTVTDEAIKQ 159 (196)
T ss_dssp CSEEEEEEESSCSSC-----HHHHHHHHT------CEEEEEEECSGGGHHHHHHHHHHTTCCEEE---ECHHHHHHHHHT
T ss_pred CCcEEEEeCcchhhH-----HHHHHHHhC------CceEEEEeCCHHHHHHHHHHHHHCCCeEEE---CCHHHHHHHHHc
Confidence 357888877765322 222333332 334445566778899999999999999877 577777777643
No 87
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=36.93 E-value=2.2e+02 Score=25.02 Aligned_cols=89 Identities=11% Similarity=0.204 Sum_probs=46.8
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCc-hHHHHHHHHHHH--cCCCEEEEEeCCchHHHHH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGP-SHAIDITREAIK--EGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~-~~a~~~~~~~~~--~~~d~ivv~GGDGTv~evl 122 (359)
+++.+ +.|.... ...|..+...+++... .++++.+..+... ....+.++++.. .++|.||+++-+....+++
T Consensus 4 ~~Ig~-i~p~~~~---~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~~~~~~~~~~ 79 (350)
T 3h75_A 4 TSVVF-LNPGNST---ETFWVSYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQYVAPQIL 79 (350)
T ss_dssp CEEEE-EECSCTT---CHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEECCSSHHHHHH
T ss_pred CEEEE-ECCCCCC---ChHHHHHHHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeCchhhHHHHH
Confidence 34555 4555322 1334444444443321 1345544444332 222345666666 4899999997444566677
Q ss_pred hHhHhCCccccccccccCCcceEEEeeCcC
Q 018199 123 NGFFSAGKLVTNHNRESAHSTALGLIPLGT 152 (359)
Q Consensus 123 ngl~~~~~~~~~~~~~~~~~~~lgiiP~GT 152 (359)
..+. ...+|+-.+-...
T Consensus 80 ~~~~-------------~~giPvV~~~~~~ 96 (350)
T 3h75_A 80 RLSQ-------------GSGIKLFIVNSPL 96 (350)
T ss_dssp HHHT-------------TSCCEEEEEESCC
T ss_pred HHHH-------------hCCCcEEEEcCCC
Confidence 6653 3457777765543
No 88
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=36.66 E-value=1.9e+02 Score=24.37 Aligned_cols=78 Identities=9% Similarity=0.046 Sum_probs=42.0
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchH-HH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTL-HE 120 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv-~e 120 (359)
.+.+++.+++...+ ...|.++...+.+.+. .++++.+..+.. .....+..+.+...++|.||+.+.|... .+
T Consensus 6 ~~~~~Ig~i~~~~~-----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~ 80 (293)
T 3l6u_A 6 PKRNIVGFTIVNDK-----HEFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGS 80 (293)
T ss_dssp ---CEEEEEESCSC-----SHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHH
T ss_pred CCCcEEEEEEecCC-----cHHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHH
Confidence 34566777764332 1233444433333221 245555444443 2333456667777899999999887654 46
Q ss_pred HHhHhH
Q 018199 121 VVNGFF 126 (359)
Q Consensus 121 vlngl~ 126 (359)
.+..+.
T Consensus 81 ~~~~~~ 86 (293)
T 3l6u_A 81 AIEEAK 86 (293)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666664
No 89
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=36.65 E-value=2e+02 Score=24.63 Aligned_cols=88 Identities=13% Similarity=0.123 Sum_probs=49.3
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch-HHHHHhH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT-LHEVVNG 124 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evlng 124 (359)
+++.+++.-.+ ..-....++.+...+.+. ++++.+..+.. .....+..+.+...++|.||+.+-|.+ +.+.+..
T Consensus 3 ~~Igvi~~~~~-~~~~~~~~~gi~~~a~~~---g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~ 78 (313)
T 3m9w_A 3 VKIGMAIDDLR-LERWQKDRDIFVKKAESL---GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKE 78 (313)
T ss_dssp CEEEEEESCCS-SSTTHHHHHHHHHHHHHT---SCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHH
T ss_pred cEEEEEeCCCC-ChHHHHHHHHHHHHHHHc---CCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHH
Confidence 45666654332 222223334444444442 35554444432 233345666777789999999998875 3677776
Q ss_pred hHhCCccccccccccCCcceEEEeeCc
Q 018199 125 FFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 125 l~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
+.. ..+|+-.+-..
T Consensus 79 ~~~-------------~~iPvV~~~~~ 92 (313)
T 3m9w_A 79 AKQ-------------EGIKVLAYDRM 92 (313)
T ss_dssp HHT-------------TTCEEEEESSC
T ss_pred HHH-------------CCCeEEEECCc
Confidence 642 35777666443
No 90
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=36.63 E-value=1.4e+02 Score=26.21 Aligned_cols=80 Identities=5% Similarity=-0.042 Sum_probs=45.9
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNG 124 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlng 124 (359)
..+++.+|..... .+....+.+...+++... .............+....+.++...++|+|++++-|.....++..
T Consensus 137 g~~~iaii~~~~~---~~~~~~~~~~~~l~~~g~-~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~ 212 (356)
T 3ipc_A 137 KDAKVAIIHDKTP---YGQGLADETKKAANAAGV-TEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQ 212 (356)
T ss_dssp TTCCEEEEECSSH---HHHHHHHHHHHHHHHTTC-CCSEEEECCTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCh---HHHHHHHHHHHHHHHcCC-EEEEEEeeCCCCCCHHHHHHHHHhcCCCEEEEccCchHHHHHHHH
Confidence 4678988875321 122233444555555321 111122222233344556666667789999999888888888888
Q ss_pred hHhC
Q 018199 125 FFSA 128 (359)
Q Consensus 125 l~~~ 128 (359)
+.+.
T Consensus 213 ~~~~ 216 (356)
T 3ipc_A 213 AADQ 216 (356)
T ss_dssp HHHH
T ss_pred HHHC
Confidence 7643
No 91
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=36.57 E-value=77 Score=27.19 Aligned_cols=58 Identities=24% Similarity=0.310 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCEEEEEeCC----chHHHHHhHhHhCCccccccccccCCcceEEEeeCcCh-hhhhhhcCCCC
Q 018199 94 AIDITREAIKEGADAVIAVGGD----GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTG-SDFARTFGWRN 164 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGD----GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTg-N~~Ar~lg~~~ 164 (359)
..+.+.+...++-+++++.+|| |+..+.+..+.. ..+++=+||.=|. ...+..+|+|.
T Consensus 66 ~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~-------------~gi~veviPGiSS~~aa~a~~G~pl 128 (253)
T 4e16_A 66 IIDVMREGIENNKSVVRLQTGDFSIYGSIREQVEDLNK-------------LNIDYDCTPGVSSFLGAASSLGVEY 128 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEESBCTTTTCCHHHHHHHHHH-------------HTCCEEEECCCCHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHH-------------CCCCEEEECCHHHHHHHHHHhCCCc
Confidence 3334444455677899999999 666777766642 2478999998654 55556677763
No 92
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=36.40 E-value=2e+02 Score=24.41 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=40.1
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHH---HHHHHHHcCCCEEEEEeCCchHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAID---ITREAIKEGADAVIAVGGDGTLH 119 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~---~~~~~~~~~~d~ivv~GGDGTv~ 119 (359)
+.+++.+++ |... ...|.++...+.+.+. .++.+.+..+.. +....+ ..+.+...++|.||+++.|.+ .
T Consensus 7 ~~~~Ig~i~-~~~~----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~ 80 (290)
T 2rgy_A 7 QLGIIGLFV-PTFF----GSYYGTILKQTDLELRAVHRHVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDLH-D 80 (290)
T ss_dssp -CCEEEEEC-SCSC----SHHHHHHHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSSC-H
T ss_pred CCCeEEEEe-CCCC----CchHHHHHHHHHHHHHHCCCEEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCCC-H
Confidence 345566655 4432 1234444433333221 234444444432 233344 566677788999999998876 4
Q ss_pred HHHhHhH
Q 018199 120 EVVNGFF 126 (359)
Q Consensus 120 evlngl~ 126 (359)
+.+..+.
T Consensus 81 ~~~~~l~ 87 (290)
T 2rgy_A 81 EDLDELH 87 (290)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5565553
No 93
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=36.10 E-value=36 Score=34.76 Aligned_cols=61 Identities=20% Similarity=0.347 Sum_probs=38.1
Q ss_pred HHHHHHHcCCCEEEEEeCCchHHHHH----------hHhHhCCccccccccccCCcceEEEeeCcChhhhhh
Q 018199 97 ITREAIKEGADAVIAVGGDGTLHEVV----------NGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFAR 158 (359)
Q Consensus 97 ~~~~~~~~~~d~ivv~GGDGTv~evl----------ngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar 158 (359)
.++.+...+.|.+|++|||||+.-+. +.|.+.++ +..........+++--||.==-||++-
T Consensus 91 ~~~~l~~~~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~-is~e~~~~~~~i~vVGIPkTIDNDl~g 161 (787)
T 3o8o_A 91 AAGNLISQGIDALVVCGGDGSLTGADLFRHEWPSLVDELVAEGR-FTKEEVAPYKNLSIVGLVGSIDNDMSG 161 (787)
T ss_dssp HHHHHHHHTEEEEEEEECHHHHHHHHHHHTTHHHHHHHHHSSSS-CCTTTTTTTCSCEEEEEEEESSCCCTT
T ss_pred HHHHHHHcCCCEEEEeCCCchHHHHHHHHHhhHHHHHHHHhccc-ccHHHHhcCCCCcEEEEeecCcCCCCC
Confidence 44555567899999999999997653 22322110 000001123468999999888888873
No 94
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=35.55 E-value=36 Score=35.56 Aligned_cols=58 Identities=10% Similarity=0.110 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
+..+++..+...+.|.+|++|||||+.-+. .|.+... .-....+|+--||.==-||+.
T Consensus 676 ~~~~i~~~l~~~~Id~LvvIGGdgS~~~a~-~L~~~~~------~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 676 DMGTVAYYFQQYKFDGLIIIGGFEAFTALY-ELDAARA------QYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp GHHHHHHHHHHHTCSEEEEEESHHHHHHHH-HHHHHTT------TCGGGCSCEEEEEBCSSCCCT
T ss_pred hHHHHHHHHHHcCCCEEEEeCCchHHHHHH-HHHHHHh------hCCCcCCcEEeccccccCCCC
Confidence 455566666677899999999999986544 4543110 001136899999998889986
No 95
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=35.38 E-value=70 Score=25.97 Aligned_cols=56 Identities=14% Similarity=0.193 Sum_probs=30.8
Q ss_pred HHHHHHhccccccceEEEecCCchHHHHHHHHHHHc-CCCEEEEEeCCc-----hHHHHHhHh
Q 018199 69 LLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE-GADAVIAVGGDG-----TLHEVVNGF 125 (359)
Q Consensus 69 ~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~-~~d~ivv~GGDG-----Tv~evlngl 125 (359)
+...|++. +.......+..+..+...+..+++..+ ++|+||+.||=| -..+++..+
T Consensus 45 L~~~l~~~-G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~~D~t~eal~~~ 106 (178)
T 2pjk_A 45 IKQLLIEN-GHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIRKL 106 (178)
T ss_dssp HHHHHHHT-TCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTCCHHHHHGGG
T ss_pred HHHHHHHC-CCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcchHHHHHHH
Confidence 44555553 222222224455555666666665544 499999999844 344555444
No 96
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=35.02 E-value=2.2e+02 Score=24.65 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=54.4
Q ss_pred CCCCCcEEEEEcCCCC--------CCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc---CCCEEEE
Q 018199 43 SSRRRDLVFVVNPRGA--------SGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE---GADAVIA 111 (359)
Q Consensus 43 ~~~~~~~~iiiNP~SG--------~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~---~~d~ivv 111 (359)
..+++.+.+|||-..= +..+....+.+...|+.. ++++.++.--...+..+.++++... .+|.+|+
T Consensus 17 ~~~~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~L---gF~V~~~~dlt~~em~~~l~~~~~~~h~~~D~~vv 93 (277)
T 1nw9_B 17 SMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSL---HFMVEVKGDLTAKKMVLALLELARQDHGALDCCVV 93 (277)
T ss_dssp CCSSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHT---TEEEEEEESCCHHHHHHHHHHHHHSCCTTCSEEEE
T ss_pred CCCcccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHHhhcccCCeEEE
Confidence 5567788888876521 111223345566666653 4566655555666777777776543 3564433
Q ss_pred E----eC--------------Cc---hHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhhc
Q 018199 112 V----GG--------------DG---TLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTF 160 (359)
Q Consensus 112 ~----GG--------------DG---Tv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~l 160 (359)
+ |. || .+.++.+-+-.... .....++.|-+|-+=-||.+.+..
T Consensus 94 ~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~~C------psL~gKPKlffiQACRG~~~d~g~ 157 (277)
T 1nw9_B 94 VILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSC------PSLGGKPKLFFIQACGGEQKDHGF 157 (277)
T ss_dssp EEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTTTC------GGGTTSCEEEEEEEEC--------
T ss_pred EEeCCCCccccccCCCcEEecCCceeeHHHHHHHhcccCC------hhHcCCCcEEEEeccCCCcccCCc
Confidence 3 43 33 24555554321110 012356788889887788776544
No 97
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=34.98 E-value=44 Score=34.01 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhh
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFAR 158 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar 158 (359)
+..++++.+...+.|.+|++|||||+.-+.. |.+.. .......+|+--||.==-||++-
T Consensus 477 ~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~-L~~~~------~~~~~~~i~vvgiPkTIDNDl~g 535 (762)
T 3o8l_A 477 SFEQISANITKFNIQGLVIIGGFEAYTGGLE-LMEGR------KQFDELCIPFVVIPATVSNNVPG 535 (762)
T ss_dssp GHHHHHHHHHHTTCCCEEEEESHHHHHHHHH-HHHHH------HHCSTTCSCEEEEEBCTTCCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEeCCchHHHHHHH-HHHHH------HhccccCCCEEeeccccCCCCCC
Confidence 4555666667778999999999999977653 32100 00012368999999988999973
No 98
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=34.87 E-value=2.1e+02 Score=24.34 Aligned_cols=47 Identities=4% Similarity=0.015 Sum_probs=29.7
Q ss_pred ccceEEEecC---CchHHHHHHHHHHHcCCCEEEEEeCCch-HHHHHhHhH
Q 018199 80 DCNICESLTS---GPSHAIDITREAIKEGADAVIAVGGDGT-LHEVVNGFF 126 (359)
Q Consensus 80 ~~~~~~~~t~---~~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evlngl~ 126 (359)
++++.+..+. .+....+..+.+...++|.||+.+-|.+ +.+.+..+.
T Consensus 33 g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~ 83 (297)
T 3rot_A 33 KVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRAN 83 (297)
T ss_dssp TCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHH
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHH
Confidence 3455444443 3444446667777889999999988765 355565554
No 99
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=34.78 E-value=2.1e+02 Score=24.91 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=40.7
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcC--CCEEEEEeCCch-H
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEG--ADAVIAVGGDGT-L 118 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~--~d~ivv~GGDGT-v 118 (359)
.+.+++.+++.-.+ ...|.++...+.+.+. .++++.+..+.. +....+..+.+...+ +|.||+.+.|.. .
T Consensus 3 ~~s~~Igvi~~~~~-----~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~ 77 (332)
T 2rjo_A 3 LGQTTLACSFRSLT-----NPYYTAFNKGAQSFAKSVGLPYVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADA 77 (332)
T ss_dssp CCCCEEEEEESCTT-----SHHHHHHHHHHHHHHHHHTCCEEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCSSHHHH
T ss_pred CCccEEEEEecCCC-----cHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCCCHHHH
Confidence 34566777764321 1233344433333221 234554444433 223345566667778 999999988764 3
Q ss_pred HHHHhHh
Q 018199 119 HEVVNGF 125 (359)
Q Consensus 119 ~evlngl 125 (359)
.+.+..+
T Consensus 78 ~~~~~~~ 84 (332)
T 2rjo_A 78 RVIVEAC 84 (332)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3555555
No 100
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=34.69 E-value=71 Score=26.94 Aligned_cols=45 Identities=24% Similarity=0.489 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCCEEEEEeCC-chHHHHHhHhHhCCccccccccccCCcceEEEeeCc
Q 018199 94 AIDITREAIKEGADAVIAVGGD-GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGD-GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
|+++.+.+...++ .||.-||. |-.-.+..+.+..+ ...+|+||..
T Consensus 34 A~~lg~~LA~~G~-~vVsGGg~~GiM~aa~~gAl~~G------------G~tiGVlP~~ 79 (215)
T 2a33_A 34 AVDLGNELVSRNI-DLVYGGGSIGLMGLVSQAVHDGG------------RHVIGIIPKT 79 (215)
T ss_dssp HHHHHHHHHHTTC-EEEECCCSSHHHHHHHHHHHHTT------------CCEEEEEESS
T ss_pred HHHHHHHHHHCCC-EEEECCChhhHhHHHHHHHHHcC------------CcEEEEcchH
Confidence 4455555555444 33444555 98888888887543 4689999864
No 101
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=34.61 E-value=48 Score=33.77 Aligned_cols=61 Identities=21% Similarity=0.343 Sum_probs=37.9
Q ss_pred HHHHHHHcCCCEEEEEeCCchHHHHH----------hHhHhCCccccccccccCCcceEEEeeCcChhhhhh
Q 018199 97 ITREAIKEGADAVIAVGGDGTLHEVV----------NGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFAR 158 (359)
Q Consensus 97 ~~~~~~~~~~d~ivv~GGDGTv~evl----------ngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar 158 (359)
.++.+...+.|.+|++|||||+.-+. +.|.+..+ +..........+++--||.==-||++-
T Consensus 90 ~~~~l~~~~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~-is~e~~~~~~~i~vVGiPkTIDNDl~g 160 (766)
T 3o8o_B 90 GAQHLIEAGVDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNR-ISNEQYERMKHLNICGTVGSIDNDMST 160 (766)
T ss_dssp HHHHHHHHTCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTSS-SCHHHHHHTCCCEEEEEEBCTTCCCTT
T ss_pred HHHHHHHcCCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhccc-ccHHHHhcCCCCcEEEEeccccCCCCC
Confidence 44555667899999999999997553 23332110 000000112468999999888898874
No 102
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=34.56 E-value=1.9e+02 Score=24.49 Aligned_cols=89 Identities=9% Similarity=0.079 Sum_probs=48.5
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
.+.+++.+++.-.+ ...|.++...+++.+. .++++.+..+.. .....+..+.+...++|.||+.+.+. ..+.
T Consensus 6 ~~~~~Igvv~~~~~-----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~ 79 (291)
T 3egc_A 6 KRSNVVGLIVSDIE-----NVFFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG-EHDY 79 (291)
T ss_dssp -CCCEEEEEESCTT-----SHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS-CCHH
T ss_pred CCCcEEEEEECCCc-----chHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC-ChHH
Confidence 44566777774322 1233444433333221 245555555443 23344566667778999999999887 3455
Q ss_pred HhHhHhCCccccccccccCCcceEEEeeCc
Q 018199 122 VNGFFSAGKLVTNHNRESAHSTALGLIPLG 151 (359)
Q Consensus 122 lngl~~~~~~~~~~~~~~~~~~~lgiiP~G 151 (359)
+..+. ...+|+..+-..
T Consensus 80 ~~~~~-------------~~~iPvV~~~~~ 96 (291)
T 3egc_A 80 LRTEL-------------PKTFPIVAVNRE 96 (291)
T ss_dssp HHHSS-------------CTTSCEEEESSC
T ss_pred HHHhh-------------ccCCCEEEEecc
Confidence 55442 345777766443
No 103
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=34.44 E-value=1.6e+02 Score=23.66 Aligned_cols=63 Identities=10% Similarity=0.024 Sum_probs=25.9
Q ss_pred CCCCCCCCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE------ecCCchHHHHHHHHHHHcCCCE
Q 018199 38 HGAASSSRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES------LTSGPSHAIDITREAIKEGADA 108 (359)
Q Consensus 38 ~~~~~~~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~------~t~~~~~a~~~~~~~~~~~~d~ 108 (359)
+++.+++..+|+. |-+-++| -..-+.+...|++. ++++..+ .+++|.-+...++.....+.|.
T Consensus 13 ~~~~~~~~~MkIa-IgsDhaG----~~lK~~i~~~L~~~---G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~ 81 (166)
T 3s5p_A 13 EAQTQGPGSMKVA-FASDHGG----RDLRMFLQQRASAH---GYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADC 81 (166)
T ss_dssp ------CTTCEEE-EEECGGG----HHHHHHHHHHHHHT---TCEEEEEEC--------CHHHHHHHHHHHTTSCSE
T ss_pred eecCCCCCceEEE-EEECchH----HHHHHHHHHHHHHC---CCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcE
Confidence 3445555556644 4555554 22223466777764 3333322 2345555555555444444443
No 104
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=34.10 E-value=59 Score=26.04 Aligned_cols=38 Identities=24% Similarity=0.451 Sum_probs=24.3
Q ss_pred ecCCchHHHHHHHHHHHcCCCEEEEEeCCc-----hHHHHHhHh
Q 018199 87 LTSGPSHAIDITREAIKEGADAVIAVGGDG-----TLHEVVNGF 125 (359)
Q Consensus 87 ~t~~~~~a~~~~~~~~~~~~d~ivv~GGDG-----Tv~evlngl 125 (359)
..+. +...+..+++..+++|+|++.||=| -..+++..+
T Consensus 49 v~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~~D~t~eal~~~ 91 (164)
T 3pzy_A 49 VADG-SPVGEALRKAIDDDVDVILTSGGTGIAPTDSTPDQTVAV 91 (164)
T ss_dssp ECSS-HHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHHTT
T ss_pred eCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCCCccHHHHHHHH
Confidence 4444 5555555665545799999999855 345555544
No 105
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=33.82 E-value=1.4e+02 Score=25.55 Aligned_cols=81 Identities=7% Similarity=0.026 Sum_probs=43.0
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
.+.+.+.+++.... .......|.++...+.+.+. .++.+.+..+.......++.+.+...++|.||+++.+.+- +.+
T Consensus 4 ~~s~~Igvi~~~~~-~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~ 81 (294)
T 3qk7_A 4 GRTDAIALAYPSRP-RVLNNSTFLEMISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED-FRL 81 (294)
T ss_dssp -CCCEEEEEEESCS-GGGSCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC-HHH
T ss_pred CccceEEEEecCCC-ccccChhHHHHHHHHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh-HHH
Confidence 34567777774211 11112334444444443322 2455555555543344455566666789999999887644 555
Q ss_pred hHhH
Q 018199 123 NGFF 126 (359)
Q Consensus 123 ngl~ 126 (359)
..+.
T Consensus 82 ~~l~ 85 (294)
T 3qk7_A 82 QYLQ 85 (294)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 106
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=33.75 E-value=34 Score=31.06 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=34.5
Q ss_pred cEEE-EEcCCCCCCch--hhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEE
Q 018199 48 DLVF-VVNPRGASGRT--GKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAV 112 (359)
Q Consensus 48 ~~~i-iiNP~SG~g~~--~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~ 112 (359)
|+.| =+||+||-+.. .+..+-+.|.+++.-..++++. +|--+..+-......+||.|++.
T Consensus 207 rIaV~GLNPHAGE~G~~G~EE~~iI~PAi~~~r~~Gi~~~-----GP~paDT~F~~~~~~~~D~vlaM 269 (330)
T 2hi1_A 207 RIAVAGVNPHAGENGLFGDEETRILTPAITDARAKGMDVY-----GPCPPDTVFLQAYEGQYDMVVAM 269 (330)
T ss_dssp EEEEECSSGGGSSTTSCCHHHHHTHHHHHHHHHTTTCEEE-----EEECHHHHHHHHHTTSCSEEEES
T ss_pred CEEEEecCCCCCCCCCCCHhHHHHHHHHHHHHHHCCCcee-----CCCCchhhccccccccCCEEEEc
Confidence 3444 48999987533 2333446788876543444331 23334444445556789999964
No 107
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=33.66 E-value=1.1e+02 Score=26.95 Aligned_cols=78 Identities=6% Similarity=0.005 Sum_probs=43.7
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceE--EEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNIC--ESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~--~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
..+++.+|. +... -+....+.+...+++. ++.+. ........+....+.++...++|+|++++-|.....++
T Consensus 134 g~~~ia~i~-~~~~--~~~~~~~~~~~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~l~~~~~dav~~~~~~~~a~~~~ 207 (362)
T 3snr_A 134 NVKTVGYIG-YSDS--YGDLWFNDLKKQGEAM---GLKIVGEERFARPDTSVAGQALKLVAANPDAILVGASGTAAALPQ 207 (362)
T ss_dssp TCCEEEEEE-ESSH--HHHHHHHHHHHHHHHT---TCEEEEEEEECTTCSCCHHHHHHHHHHCCSEEEEECCHHHHHHHH
T ss_pred CCCEEEEEe-cCch--HHHHHHHHHHHHHHHc---CCEEEEEeecCCCCCCHHHHHHHHHhcCCCEEEEecCcchHHHHH
Confidence 457888884 3221 1222334445555553 22221 22222233444455666667899999988777778888
Q ss_pred hHhHhC
Q 018199 123 NGFFSA 128 (359)
Q Consensus 123 ngl~~~ 128 (359)
..+.+.
T Consensus 208 ~~~~~~ 213 (362)
T 3snr_A 208 TTLRER 213 (362)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 887654
No 108
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=33.48 E-value=85 Score=25.76 Aligned_cols=31 Identities=10% Similarity=0.199 Sum_probs=21.3
Q ss_pred EecCCchHHHHHHHHHHH-cCCCEEEEEeCCc
Q 018199 86 SLTSGPSHAIDITREAIK-EGADAVIAVGGDG 116 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~-~~~d~ivv~GGDG 116 (359)
+..+..+...+..+++.. .++|.||+.||=|
T Consensus 58 iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg 89 (189)
T 1jlj_A 58 IVPDEIEEIKETLIDWCDEKELNLILTTGGTG 89 (189)
T ss_dssp EECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred EeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCC
Confidence 445555566666666654 3799999999954
No 109
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=33.02 E-value=1.1e+02 Score=27.40 Aligned_cols=78 Identities=8% Similarity=-0.041 Sum_probs=41.2
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceE--EEecCCchHHHHHHHH--HHHcCCCEEEEEeCCchHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNIC--ESLTSGPSHAIDITRE--AIKEGADAVIAVGGDGTLHE 120 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~--~~~t~~~~~a~~~~~~--~~~~~~d~ivv~GGDGTv~e 120 (359)
..+++.+|..+.. .-+....+.+...+++. ++.+. ........+....+.+ +...++|+|++++-......
T Consensus 140 g~~~iaii~~~~~--~~g~~~~~~~~~~l~~~---G~~v~~~~~~~~~~~d~~~~~~~~~l~~~~~dav~~~~~~~~~~~ 214 (391)
T 3eaf_A 140 GQGKLALAYDSKV--AYSRSPIGAIKKAAPSL---GLQVVGDYDLPLRATEADAERIAREMLAADPDYVWCGNTISSCSL 214 (391)
T ss_dssp CSEEEEEEECTTC--HHHHTTHHHHHHHTGGG---TEEEEEEEECCTTCCHHHHHHHHHHHHTTCCSEEEECSCHHHHHH
T ss_pred CCCEEEEEEecCC--hhHHHHHHHHHHHHHHc---CCceeeeeccCCCCcCHHHHHHHHHHHHcCCCEEEEecCcHHHHH
Confidence 4688999987532 12222333444444443 22322 1223333456666666 66678898876543345556
Q ss_pred HHhHhHh
Q 018199 121 VVNGFFS 127 (359)
Q Consensus 121 vlngl~~ 127 (359)
++..+.+
T Consensus 215 ~~~~~~~ 221 (391)
T 3eaf_A 215 LGRAMAK 221 (391)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666643
No 110
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=32.93 E-value=2.4e+02 Score=24.48 Aligned_cols=109 Identities=16% Similarity=0.164 Sum_probs=58.6
Q ss_pred CCCCCcEEEEEcCC---------------CCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc---
Q 018199 43 SSRRRDLVFVVNPR---------------GASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE--- 104 (359)
Q Consensus 43 ~~~~~~~~iiiNP~---------------SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~--- 104 (359)
..++|.+.+|||-. .-+..+....+.+...|+.. ++++.++.--...+..+.++++...
T Consensus 13 ~~~~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~L---GF~V~~~~dlt~~em~~~l~~~~~~~h~ 89 (271)
T 3h11_B 13 KSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEEL---HFEIKPHDDCTVEQIYEILKIYQLMDHS 89 (271)
T ss_dssp CSSSCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHHSCCT
T ss_pred CCCCCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence 55677888888752 11111223345566666653 4566666555666777777776543
Q ss_pred CCCEEEE-----------EeCCch---HHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhhc
Q 018199 105 GADAVIA-----------VGGDGT---LHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTF 160 (359)
Q Consensus 105 ~~d~ivv-----------~GGDGT---v~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~l 160 (359)
.+|.+|+ +|=||. +.++.+-+-.... .....+|.|-+|-+=-||.+.+..
T Consensus 90 ~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~~C------psL~gKPKlffiQACRG~~~~~gv 153 (271)
T 3h11_B 90 NMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKC------PSLAGKPKVFFIQACQGDNYQKGI 153 (271)
T ss_dssp TCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTC------GGGTTSCEEEEEESCCSSBCC---
T ss_pred CCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhccC------hhhcCCccEEEEeccCCCcccCCc
Confidence 3554432 455663 5666654421110 012356778888887777665543
No 111
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=32.72 E-value=90 Score=24.82 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=21.7
Q ss_pred EecCCchHHHHHHHHHHHc-CCCEEEEEeCCc
Q 018199 86 SLTSGPSHAIDITREAIKE-GADAVIAVGGDG 116 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~~-~~d~ivv~GGDG 116 (359)
+..+..+...+..+++..+ ++|.||+.||=|
T Consensus 42 iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g 73 (164)
T 2is8_A 42 LVPDEPPMIKKVLRLWADREGLDLILTNGGTG 73 (164)
T ss_dssp EECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred EcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4455555666666666554 799999999954
No 112
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=32.48 E-value=2.2e+02 Score=23.89 Aligned_cols=78 Identities=9% Similarity=-0.019 Sum_probs=42.9
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch-HHH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT-LHE 120 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~e 120 (359)
.+.+++.+++...+ ...+.++...+.+.+. .++++.+..+.. +....+..+.+...++|.||+.+.|.+ ..+
T Consensus 3 ~~~~~Ig~i~~~~~-----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~ 77 (291)
T 3l49_A 3 LEGKTIGITAIGTD-----HDWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNP 77 (291)
T ss_dssp CTTCEEEEEESCCS-----SHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHH
T ss_pred CCCcEEEEEeCCCC-----ChHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHH
Confidence 44567777765332 1223333333333221 234554444443 233345666777789999999999853 556
Q ss_pred HHhHhH
Q 018199 121 VVNGFF 126 (359)
Q Consensus 121 vlngl~ 126 (359)
.++.+.
T Consensus 78 ~~~~~~ 83 (291)
T 3l49_A 78 WLQKIN 83 (291)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 113
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=32.16 E-value=15 Score=24.34 Aligned_cols=12 Identities=8% Similarity=-0.155 Sum_probs=10.4
Q ss_pred CEEEEEeCCchH
Q 018199 107 DAVIAVGGDGTL 118 (359)
Q Consensus 107 d~ivv~GGDGTv 118 (359)
..|+|++||||+
T Consensus 39 tGViVg~~dgtv 50 (65)
T 2x9a_A 39 SGIGIGYDNDTS 50 (65)
T ss_dssp EEEEEEETTTTE
T ss_pred eeEEEECCCCCE
Confidence 368999999996
No 114
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=32.01 E-value=76 Score=25.36 Aligned_cols=31 Identities=29% Similarity=0.567 Sum_probs=22.1
Q ss_pred EecCCchHHHHHHHHHHHcCCCEEEEEeCCc
Q 018199 86 SLTSGPSHAIDITREAIKEGADAVIAVGGDG 116 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDG 116 (359)
+..+..+...+..+++..+++|.|+..||=|
T Consensus 50 iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g 80 (167)
T 2g2c_A 50 VVPEGYDTVVEAIATALKQGARFIITAGGTG 80 (167)
T ss_dssp EECSSHHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred EeCCCHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4455556666666666654699999999966
No 115
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=31.57 E-value=44 Score=34.78 Aligned_cols=58 Identities=22% Similarity=0.123 Sum_probs=39.8
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhh
Q 018199 94 AIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFAR 158 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar 158 (359)
..+++..+...+.|.+|++|||||+.-+. .|.+... ......+|+--||.==-||+.-
T Consensus 651 ~~~i~~~l~~~~Id~LvvIGGdgS~~~a~-~L~~~~~------~~~~~~i~vVGIPkTIDNDl~g 708 (941)
T 3opy_B 651 IGMIAYFFEKYGFDGLILVGGFEAFISLH-QLERARI------NYPSLRIPLVLIPATISNNVPG 708 (941)
T ss_dssp HHHHHHHHHHTTCSEEEEEESHHHHHHHH-HHHHGGG------TCGGGCSCEEEEEBCSSCCCTT
T ss_pred HHHHHHHHHHcCCCEEEEeCCchHHHHHH-HHHHHHH------hcCccCCcEEeeeccccCCCCC
Confidence 44566666677899999999999986544 3432100 0012368999999998999863
No 116
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=31.56 E-value=64 Score=29.72 Aligned_cols=69 Identities=10% Similarity=0.242 Sum_probs=34.4
Q ss_pred cEEEEEcCCCCCCc-hhhhHHHHHHHHHhccccccceEEEecCC------chHHHHHHHH----HHHcCCCEEEEE-eCC
Q 018199 48 DLVFVVNPRGASGR-TGKEWKKLLPYLRSRLSVDCNICESLTSG------PSHAIDITRE----AIKEGADAVIAV-GGD 115 (359)
Q Consensus 48 ~~~iiiNP~SG~g~-~~~~~~~~~~~l~~~~~~~~~~~~~~t~~------~~~a~~~~~~----~~~~~~d~ivv~-GGD 115 (359)
.-.-|+.|.|+-.. ....+++....|++. ++++..-.+.. .+..++.+++ +...+.++|+++ ||+
T Consensus 44 D~I~ivaPSs~~~~~~~~~~~~~~~~L~~~---G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGy 120 (371)
T 3tla_A 44 DTIGFFSSSAPATVTAKNRFFRGVEFLQRK---GFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGD 120 (371)
T ss_dssp CEEEEECSSCCHHHHTHHHHHHHHHHHHHT---TCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCS
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhC---CCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 34556899875321 123455555667653 34443322111 2223333333 333456777665 999
Q ss_pred chHH
Q 018199 116 GTLH 119 (359)
Q Consensus 116 GTv~ 119 (359)
|+..
T Consensus 121 ga~r 124 (371)
T 3tla_A 121 NSNS 124 (371)
T ss_dssp CGGG
T ss_pred cHHH
Confidence 9863
No 117
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=31.32 E-value=43 Score=27.87 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=24.4
Q ss_pred HcCCCEEEEE-eCCchHHHHHhHhHhCCccccccccccCCcceEEEee
Q 018199 103 KEGADAVIAV-GGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIP 149 (359)
Q Consensus 103 ~~~~d~ivv~-GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP 149 (359)
..-.|++|++ ||=||+.|+...+- ...|+.+++
T Consensus 116 ~~~sda~IvlpGG~GTL~E~~eal~--------------~~kPV~lln 149 (195)
T 1rcu_A 116 LRNADVVVSIGGEIGTAIEILGAYA--------------LGKPVILLR 149 (195)
T ss_dssp HTTCSEEEEESCCHHHHHHHHHHHH--------------TTCCEEEET
T ss_pred HHhCCEEEEecCCCcHHHHHHHHHh--------------cCCCEEEEC
Confidence 3456766666 78899999999873 346788885
No 118
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=31.17 E-value=2.1e+02 Score=23.22 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=32.4
Q ss_pred CCCCCcEEEEEcCCC--------CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHH
Q 018199 43 SSRRRDLVFVVNPRG--------ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIK 103 (359)
Q Consensus 43 ~~~~~~~~iiiNP~S--------G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~ 103 (359)
..+++.+.+|+|-.. -+..+.+..+++...++.. ++++.++.--...+..+.++++..
T Consensus 40 ~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~L---GF~V~~~~dlt~~em~~~l~~~~~ 105 (179)
T 3p45_A 40 DHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDL---GFEVKCFNDLKAEELLLKIHEVST 105 (179)
T ss_dssp CSSBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHT
T ss_pred CCCccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHhh
Confidence 455677777776531 1111222345555566553 456666655566677777777654
No 119
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=31.00 E-value=1.6e+02 Score=26.05 Aligned_cols=79 Identities=9% Similarity=-0.015 Sum_probs=46.3
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEE-ecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICES-LTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
..+++.+|+.+.... +....+.+...+++. ++.+... ......+....++++...++|+|++++-|.....++.
T Consensus 148 g~~~iaii~~~~~~~--~~~~~~~~~~~~~~~---G~~v~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~ 222 (366)
T 3td9_A 148 GAKRVVVFTDVEQDY--SVGLSNFFINKFTEL---GGQVKRVFFRSGDQDFSAQLSVAMSFNPDAIYITGYYPEIALISR 222 (366)
T ss_dssp CCCEEEEEEETTCHH--HHHHHHHHHHHHHHT---TCEEEEEEECTTCCCCHHHHHHHHHTCCSEEEECSCHHHHHHHHH
T ss_pred CCcEEEEEEeCCCcH--HHHHHHHHHHHHHHC---CCEEEEEEeCCCCccHHHHHHHHHhcCCCEEEEccchhHHHHHHH
Confidence 468899997543211 122233445555553 2222211 2223344555667776778999999888888888888
Q ss_pred HhHhC
Q 018199 124 GFFSA 128 (359)
Q Consensus 124 gl~~~ 128 (359)
.+.+.
T Consensus 223 ~~~~~ 227 (366)
T 3td9_A 223 QARQL 227 (366)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 87643
No 120
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=30.94 E-value=2e+02 Score=23.82 Aligned_cols=76 Identities=9% Similarity=0.095 Sum_probs=42.0
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
.+.+.+++...+ ...|.++...+.+.+. .++++.+..+.. +....+..+.+...++|.||+.+.+..-.+.++
T Consensus 2 s~~Igvi~~~~~-----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~ 76 (272)
T 3o74_A 2 TRTLGFILPDLE-----NPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYR 76 (272)
T ss_dssp CCEEEEEESCTT-----CHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHH
T ss_pred ceEEEEEeCCCc-----ChhHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccHHHHH
Confidence 356777765432 2234444444433321 245555444443 333445666677789999999988854355565
Q ss_pred HhH
Q 018199 124 GFF 126 (359)
Q Consensus 124 gl~ 126 (359)
.+.
T Consensus 77 ~~~ 79 (272)
T 3o74_A 77 ELQ 79 (272)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 121
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=30.77 E-value=1.7e+02 Score=22.06 Aligned_cols=89 Identities=17% Similarity=0.150 Sum_probs=46.0
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc-CCCEEEEEe---CC--chHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE-GADAVIAVG---GD--GTLH 119 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~-~~d~ivv~G---GD--GTv~ 119 (359)
|++++|++=.. .|.+.+..+.+...+.+. ++++.++...... ..+ .. ++|.|+++. |+ |.+.
T Consensus 1 M~ki~I~y~S~--tGnT~~~A~~ia~~l~~~---g~~v~~~~~~~~~-~~~------l~~~~d~ii~g~pty~~~~G~~p 68 (148)
T 3f6r_A 1 MSKVLIVFGSS--TGNTESIAQKLEELIAAG---GHEVTLLNAADAS-AEN------LADGYDAVLFGCSAWGMEDLEMQ 68 (148)
T ss_dssp -CEEEEEEECS--SSHHHHHHHHHHHHHHTT---TCEEEEEETTTBC-CTT------TTTTCSEEEEEECEECSSSCEEC
T ss_pred CCeEEEEEECC--CchHHHHHHHHHHHHHhC---CCeEEEEehhhCC-HhH------hcccCCEEEEEecccCCCCCCCc
Confidence 46788888655 456666677777666653 2334433322210 000 13 688777664 45 6666
Q ss_pred HHHhHhHhCCccccccccccCCcceEEEeeCcC
Q 018199 120 EVVNGFFSAGKLVTNHNRESAHSTALGLIPLGT 152 (359)
Q Consensus 120 evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GT 152 (359)
..+..++..-. .......+++++-.|.
T Consensus 69 ~~~~~fl~~l~------~~~l~~k~~~vfg~G~ 95 (148)
T 3f6r_A 69 DDFLSLFEEFD------RIGLAGRKVAAFASGD 95 (148)
T ss_dssp HHHHHHHTTGG------GTCCTTCEEEEEEEEC
T ss_pred HHHHHHHHHhh------ccCCCCCEEEEEEeCC
Confidence 55555543210 0113456777775544
No 122
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=30.74 E-value=2.6e+02 Score=24.15 Aligned_cols=76 Identities=9% Similarity=0.062 Sum_probs=40.6
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-c-ccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch-HHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-V-DCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT-LHE 120 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~-~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~e 120 (359)
+.+++.+++. .+ ...+..+...+.+... . ++++.+..+.. +....+.++.+...++|.||+.+.+.+ +.+
T Consensus 5 ~~~~Igvi~~-~~-----~~~~~~~~~gi~~~a~~~~g~~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~ 78 (325)
T 2x7x_A 5 PHFRIGVAQC-SD-----DSWRHKMNDEILREAMFYNGVSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAPMTP 78 (325)
T ss_dssp -CCEEEEEES-CC-----SHHHHHHHHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSHHHHHH
T ss_pred CCeEEEEEec-CC-----CHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHH
Confidence 4456777664 31 1233344444443322 2 34554444432 233345566677788999999988764 345
Q ss_pred HHhHhH
Q 018199 121 VVNGFF 126 (359)
Q Consensus 121 vlngl~ 126 (359)
.+..+.
T Consensus 79 ~~~~~~ 84 (325)
T 2x7x_A 79 IVEEAY 84 (325)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 565553
No 123
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=30.74 E-value=2.5e+02 Score=23.93 Aligned_cols=47 Identities=15% Similarity=0.108 Sum_probs=28.8
Q ss_pred ccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch-HHHHHhHhH
Q 018199 80 DCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT-LHEVVNGFF 126 (359)
Q Consensus 80 ~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evlngl~ 126 (359)
++.+.+..+.. +....+..+.+...++|.||+.+.|.+ +.+.+..+.
T Consensus 32 g~~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 80 (306)
T 2vk2_A 32 GITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAK 80 (306)
T ss_dssp TCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHH
Confidence 34554444432 233345566666788999999988764 356666553
No 124
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=30.10 E-value=2e+02 Score=22.46 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=33.3
Q ss_pred CCCCCcEEEEEcCCC--------CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc
Q 018199 43 SSRRRDLVFVVNPRG--------ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE 104 (359)
Q Consensus 43 ~~~~~~~~iiiNP~S--------G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~ 104 (359)
..+++.+.+|+|-.. -+..+....+.+...++.. ++++.++.--...+..+.++++...
T Consensus 12 ~~~~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~L---gF~V~~~~dlt~~em~~~l~~~~~~ 78 (146)
T 2dko_A 12 DYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNL---KYEVRNKNDLTREEIVELMRDVSKE 78 (146)
T ss_dssp CSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHHS
T ss_pred CCCCceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHC---CCEEEEeeCCCHHHHHHHHHHHHHh
Confidence 445677888887641 1111223345555666543 3556666555666777777776553
No 125
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=30.01 E-value=1.7e+02 Score=25.11 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=43.0
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNG 124 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlng 124 (359)
..|++.+|.+|... .+....+.....+++. ++++.........+..+.++++. .++|+|++ ..|.+.-.++..
T Consensus 139 g~~~I~~i~~~~~~--~~~~r~~g~~~al~~~---gi~~~~~~~~~~~~~~~~~~~l~-~~~dai~~-~~D~~a~g~~~~ 211 (302)
T 2qh8_A 139 NVKSIGVVYNPGEA--NAVSLMELLKLSAAKH---GIKLVEATALKSADVQSATQAIA-EKSDVIYA-LIDNTVASAIEG 211 (302)
T ss_dssp TCCEEEEEECTTCH--HHHHHHHHHHHHHHHT---TCEEEEEECSSGGGHHHHHHHHG-GGCSEEEE-CSCHHHHTTHHH
T ss_pred CCcEEEEEecCCCc--chHHHHHHHHHHHHHc---CCEEEEEecCChHHHHHHHHHHh-ccCCEEEE-CCcHhHHHHHHH
Confidence 57899999998531 1223334445555543 33333333334456666666664 56888765 678776555554
Q ss_pred hH
Q 018199 125 FF 126 (359)
Q Consensus 125 l~ 126 (359)
+.
T Consensus 212 l~ 213 (302)
T 2qh8_A 212 MI 213 (302)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 126
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=29.97 E-value=72 Score=29.40 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=48.4
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEe--cCCc--hHHHHHHHHHHHcC---CCEEEEEeCCchH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESL--TSGP--SHAIDITREAIKEG---ADAVIAVGGDGTL 118 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~--t~~~--~~a~~~~~~~~~~~---~d~ivv~GGDGTv 118 (359)
.++++||..|.-- + . .+...|++. +.++.++. ...+ ....+.++.+...+ .|.||++|| |++
T Consensus 53 ~~~~liVtd~~~~--~-~----~l~~~L~~~---g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGG-GS~ 121 (375)
T 3rf7_A 53 NDFVVFLVDDVHQ--H-K----PLAARVPNK---AHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGG-GST 121 (375)
T ss_dssp TCCEEEEEEGGGT--T-S----HHHHHSCCC---TTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEES-HHH
T ss_pred CCeEEEEECchhh--h-h----HHHHHHHhc---CCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCC-cHH
Confidence 3788888887531 1 1 133334321 23333332 1111 23344444444445 999999999 888
Q ss_pred HHHHhHhHhCCccccc------cccccCCcceEEEeeC
Q 018199 119 HEVVNGFFSAGKLVTN------HNRESAHSTALGLIPL 150 (359)
Q Consensus 119 ~evlngl~~~~~~~~~------~~~~~~~~~~lgiiP~ 150 (359)
-++.-.+........+ .+......+|+..||.
T Consensus 122 iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPT 159 (375)
T 3rf7_A 122 MDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPT 159 (375)
T ss_dssp HHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEES
T ss_pred HHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcC
Confidence 8887766432100000 0001123689999996
No 127
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=29.96 E-value=1.6e+02 Score=25.54 Aligned_cols=57 Identities=21% Similarity=0.141 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCCCEEEEEeCC----chHHHHHhHhHhCCccccccccccCCcceEEEeeCcC-hhhhhhhcCCCC
Q 018199 95 IDITREAIKEGADAVIAVGGD----GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGT-GSDFARTFGWRN 164 (359)
Q Consensus 95 ~~~~~~~~~~~~d~ivv~GGD----GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GT-gN~~Ar~lg~~~ 164 (359)
.+.+.+...++-+++++.+|| |+-.+.+..+. ...+++=+||.=| ....+..+|+|.
T Consensus 82 ~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~-------------~~gi~veviPGiSs~~aa~a~~Gipl 143 (280)
T 1s4d_A 82 SLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLV-------------EHQVPFRIVPGITAGIGGLAYAGIPV 143 (280)
T ss_dssp HHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHH-------------TTTCCEEEECCCCTTTHHHHHTTCCS
T ss_pred HHHHHHHHhCCCeEEEEcCCCCccccCHHHHHHHHH-------------HCCCCEEEEcCccHHHHHHHHcCCCc
Confidence 333444445677899999999 55566666553 2358899999855 455667788874
No 128
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=29.91 E-value=2.5e+02 Score=23.60 Aligned_cols=81 Identities=9% Similarity=0.049 Sum_probs=39.0
Q ss_pred CCCCcEEEEEcCCCCCC-chhhhHHHHHHHHHhccc-cccceEEEecCCchH-HHHHHHHHHHcCCCEEEEEeCCchHHH
Q 018199 44 SRRRDLVFVVNPRGASG-RTGKEWKKLLPYLRSRLS-VDCNICESLTSGPSH-AIDITREAIKEGADAVIAVGGDGTLHE 120 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g-~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~~~-a~~~~~~~~~~~~d~ivv~GGDGTv~e 120 (359)
.+.+++.+++.. .... .....|.++...+.+.+. .++.+.+..+....+ ..++.+.+...++|.||+++.+.+ .+
T Consensus 6 ~~~~~Igvi~~~-~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~-~~ 83 (292)
T 3k4h_A 6 QTTKTLGLVMPS-SASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREN-DR 83 (292)
T ss_dssp -CCCEEEEECSS-CHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTT-CH
T ss_pred CCCCEEEEEecC-CccccccCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCC-hH
Confidence 345566666544 1000 011233444443333321 234444433433222 233455556678999999988765 35
Q ss_pred HHhHhH
Q 018199 121 VVNGFF 126 (359)
Q Consensus 121 vlngl~ 126 (359)
.+..+.
T Consensus 84 ~~~~l~ 89 (292)
T 3k4h_A 84 IIQYLH 89 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 565553
No 129
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=29.90 E-value=1.5e+02 Score=26.39 Aligned_cols=99 Identities=11% Similarity=0.096 Sum_probs=45.0
Q ss_pred EEEcCCC-CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCC
Q 018199 51 FVVNPRG-ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAG 129 (359)
Q Consensus 51 iiiNP~S-G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~ 129 (359)
+.+||.. .-++++. .+.....|... +.+..++.+...+...++++. .++=|+-||||....=-+.|+.--
T Consensus 66 i~l~~~~ss~~kgEs-l~DTarvLs~~---~~D~iviR~~~~~~~~~la~~-----~~vPVINagdg~~~HPtQaLaDl~ 136 (304)
T 3r7f_A 66 LNLDGTSTSVQKGET-LYDTIRTLESI---GVDVCVIRHSEDEYYEELVSQ-----VNIPILNAGDGCGQHPTQSLLDLM 136 (304)
T ss_dssp EEEETTSTTSCSSSC-HHHHHHHHHHH---TCCEEEEECSSTTCHHHHHHH-----CSSCEEESCCTTSCCHHHHHHHHH
T ss_pred EEECcccccCCCCCC-HHHHHHHHHHh---cCCEEEEecCChhHHHHHHHh-----CCCCEEeCCCCCCcCcHHHHHHHH
Confidence 3447742 2233332 33334445443 134445666666666666543 223377788874222111111100
Q ss_pred ccccccccccCCcceEEEeeCcChhhhhhhc
Q 018199 130 KLVTNHNRESAHSTALGLIPLGTGSDFARTF 160 (359)
Q Consensus 130 ~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~l 160 (359)
. +. .....-..+.++++--+.-|..|+|+
T Consensus 137 T-i~-e~~g~l~glkva~vGD~~~~rva~Sl 165 (304)
T 3r7f_A 137 T-IY-EEFNTFKGLTVSIHGDIKHSRVARSN 165 (304)
T ss_dssp H-HH-HHHSCCTTCEEEEESCCTTCHHHHHH
T ss_pred H-HH-HHhCCCCCCEEEEEcCCCCcchHHHH
Confidence 0 00 00001346788888766555666664
No 130
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=29.83 E-value=1.7e+02 Score=25.79 Aligned_cols=78 Identities=10% Similarity=0.007 Sum_probs=45.0
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceE--EEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNIC--ESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~--~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
..+++.+|.... ..+....+.+...+++. ++.+. ........+....++++...++|+|++++-|.....++
T Consensus 150 g~~~ia~i~~~~---~~~~~~~~~~~~~l~~~---G~~v~~~~~~~~~~~d~~~~~~~l~~~~~dai~~~~~~~~a~~~~ 223 (375)
T 4evq_A 150 GLKKAVTVTWKY---AAGEEMVSGFKKSFTAG---KGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFI 223 (375)
T ss_dssp TCCEEEEEEESS---HHHHHHHHHHHHHHHHT---TCEEEEEEEECTTCCCCHHHHHHHHHHCCSEEEEECCTHHHHHHH
T ss_pred CCcEEEEEecCc---hHHHHHHHHHHHHHHHc---CCeEEEEEecCCCCccHHHHHHHHHhcCCCEEEEecCcchHHHHH
Confidence 467888886322 11222334455556553 22221 12222233444556666666899999989998888888
Q ss_pred hHhHhC
Q 018199 123 NGFFSA 128 (359)
Q Consensus 123 ngl~~~ 128 (359)
+.+.+.
T Consensus 224 ~~~~~~ 229 (375)
T 4evq_A 224 KDYAAA 229 (375)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 888654
No 131
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=29.83 E-value=1.7e+02 Score=25.46 Aligned_cols=59 Identities=8% Similarity=0.104 Sum_probs=33.8
Q ss_pred CCCCCcEEEEEcCCC-------CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc
Q 018199 43 SSRRRDLVFVVNPRG-------ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE 104 (359)
Q Consensus 43 ~~~~~~~~iiiNP~S-------G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~ 104 (359)
..+++++.+|||-.. -...+....+.+...|+.. ++++.++.--...+..+.++++...
T Consensus 28 ~~~~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~L---GF~V~~~~dlt~~em~~~l~~~~~~ 93 (272)
T 1m72_A 28 NHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTL---GFKVTVFPNLKSEEINKFIQQTAEM 93 (272)
T ss_dssp CSSEEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHTS
T ss_pred CCCCCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHC---CCEEEEecCcCHHHHHHHHHHHHHh
Confidence 455678888887531 1112233345566666653 4566666555666777777776543
No 132
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=29.53 E-value=1.9e+02 Score=25.77 Aligned_cols=108 Identities=14% Similarity=0.122 Sum_probs=56.7
Q ss_pred CCCCCcEEEEEcCCC-------CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc---CCCEEE-E
Q 018199 43 SSRRRDLVFVVNPRG-------ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE---GADAVI-A 111 (359)
Q Consensus 43 ~~~~~~~~iiiNP~S-------G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~---~~d~iv-v 111 (359)
..+++++.+|||-.. -...+....+.+...|+.. ++++.++.--...+..+.++++... .+|.+| +
T Consensus 56 ~~~~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~L---GF~V~~~~dlt~~em~~~l~~f~~~dh~~~D~~vv~ 132 (310)
T 2nn3_C 56 NHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTL---GFKVTVFPNLKSEEINKFIQQTAEMDHSDADCLLVA 132 (310)
T ss_dssp CSSBCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHSSCGGGBSCEEEE
T ss_pred CCCCcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHC---CCEEEEecCCCHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 455678888887431 1112233345566666653 4566666555666777777776532 344332 2
Q ss_pred E----------eCCch--HHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhh
Q 018199 112 V----------GGDGT--LHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFART 159 (359)
Q Consensus 112 ~----------GGDGT--v~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~ 159 (359)
. |=||. +.++.+-+-.... .....++.|-+|-+=-||.+.+.
T Consensus 133 ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~C------psL~gKPKlffiQACRG~~~d~g 186 (310)
T 2nn3_C 133 VLTAGELGMLYAKDTHYKPDNLWYYFTADKC------PTLAGKPKLFFIQACQGDRLDGG 186 (310)
T ss_dssp EEEEEETTEEECSSCEECTHHHHGGGSTTTC------GGGTTSCEEEEEEEECCCCCCCC
T ss_pred EeCCCCCCEEEecCCcEEHHHHHHHhccccC------hhhcCCceEEEEecccCCccccC
Confidence 2 33443 4555554321100 01234677888888777776543
No 133
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=29.03 E-value=74 Score=28.80 Aligned_cols=68 Identities=13% Similarity=0.241 Sum_probs=33.9
Q ss_pred EEEEEcCCCCCCc-hhhhHHHHHHHHHhccccccceEEEecCC------chHHHHHHH----HHHHcCCCEEEEE-eCCc
Q 018199 49 LVFVVNPRGASGR-TGKEWKKLLPYLRSRLSVDCNICESLTSG------PSHAIDITR----EAIKEGADAVIAV-GGDG 116 (359)
Q Consensus 49 ~~iiiNP~SG~g~-~~~~~~~~~~~l~~~~~~~~~~~~~~t~~------~~~a~~~~~----~~~~~~~d~ivv~-GGDG 116 (359)
-.-|+.|.|+-.. ....+++....|++. ++++....+.. .++.++.++ .+...+.|+|+++ ||+|
T Consensus 15 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~---G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 91 (336)
T 3sr3_A 15 TIGIYSPSSPVTYTSPKRFERAKSYLLQK---GFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMN 91 (336)
T ss_dssp EEEEECSSSCHHHHCHHHHHHHHHHHHHT---TCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhC---CCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 3455889875321 123355555667653 33443321111 223333333 3334566777655 9999
Q ss_pred hHH
Q 018199 117 TLH 119 (359)
Q Consensus 117 Tv~ 119 (359)
+..
T Consensus 92 ~~r 94 (336)
T 3sr3_A 92 SNS 94 (336)
T ss_dssp GGG
T ss_pred HHH
Confidence 863
No 134
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=28.82 E-value=35 Score=27.92 Aligned_cols=54 Identities=20% Similarity=0.229 Sum_probs=33.1
Q ss_pred CCEEEEE-eCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcCh--hhhhhh-----cCCCCCHHHHHHHHH
Q 018199 106 ADAVIAV-GGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTG--SDFART-----FGWRNDPYEAVERIA 174 (359)
Q Consensus 106 ~d~ivv~-GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTg--N~~Ar~-----lg~~~~~~~al~~i~ 174 (359)
.|.+|++ ||=||+.|+...+. ...|+.++|. .. ..|.+. +-+..+++++++.+.
T Consensus 108 sda~IvlpGg~GTL~E~~~al~--------------~~kpV~~l~~-~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~ 169 (176)
T 2iz6_A 108 SNVLVAVGMGPGTAAEVALALK--------------AKKPVVLLGT-QPEAEKFFTSLDAGLVHVAADVAGAIAAVK 169 (176)
T ss_dssp CSEEEEESCCHHHHHHHHHHHH--------------TTCCEEEESC-CHHHHHHHHHHCTTTEEEESSHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHH--------------hCCcEEEEcC-cccccccCChhhcCeEEEcCCHHHHHHHHH
Confidence 4555555 88999999999873 3568888987 22 112111 122346777776654
No 135
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=28.78 E-value=97 Score=27.95 Aligned_cols=69 Identities=14% Similarity=0.169 Sum_probs=34.8
Q ss_pred cEEEEEcCCCCCCc-hhhhHHHHHHHHHhccccccceEEEecCC------chH----HHHHHHHHHHcCCCEEEEE-eCC
Q 018199 48 DLVFVVNPRGASGR-TGKEWKKLLPYLRSRLSVDCNICESLTSG------PSH----AIDITREAIKEGADAVIAV-GGD 115 (359)
Q Consensus 48 ~~~iiiNP~SG~g~-~~~~~~~~~~~l~~~~~~~~~~~~~~t~~------~~~----a~~~~~~~~~~~~d~ivv~-GGD 115 (359)
.-.-|+.|.|+-.. ....+++....|++. ++++....+.. .++ |.++.+.+...+.++|+++ ||+
T Consensus 13 D~I~ivaPS~~~~~~~~~~~~~~~~~L~~~---G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (331)
T 4e5s_A 13 DEIRVISPSCSLSIVSTENRRLAVKRLTEL---GFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGY 89 (331)
T ss_dssp CEEEEECSSSCGGGSCHHHHHHHHHHHHHT---TCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhC---CCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 34455789876321 133455556667653 34443322111 122 3333333334566777665 999
Q ss_pred chHH
Q 018199 116 GTLH 119 (359)
Q Consensus 116 GTv~ 119 (359)
|+..
T Consensus 90 g~~r 93 (331)
T 4e5s_A 90 NSNG 93 (331)
T ss_dssp CGGG
T ss_pred cHHH
Confidence 9863
No 136
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=28.50 E-value=61 Score=33.09 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
+..+++..+..-+.|.+|++|||||+.-+. .|.+... ......+|+--||.==-||+.
T Consensus 471 ~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~-~L~~~~~------~~~~~~i~vIgiPkTIDNDl~ 528 (787)
T 3o8o_A 471 DLGTIAYYFQKNKLDGLIILGGFEGFRSLK-QLRDGRT------QHPIFNIPMCLIPATVSNNVP 528 (787)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESHHHHHHHH-HHHHHTT------TCGGGGSCEEEEEBCTTCCCT
T ss_pred hHHHHHHHHHHhCCCEEEEeCCchHHHHHH-HHHHHHH------hcCccCCceeecccccccCCC
Confidence 344555666667899999999999987655 3432100 001236899999999999997
No 137
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=28.41 E-value=2.7e+02 Score=23.56 Aligned_cols=57 Identities=9% Similarity=0.087 Sum_probs=36.2
Q ss_pred ccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchH-HHHHhHhHhCCccccccccccCCcceEEEee
Q 018199 80 DCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTL-HEVVNGFFSAGKLVTNHNRESAHSTALGLIP 149 (359)
Q Consensus 80 ~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv-~evlngl~~~~~~~~~~~~~~~~~~~lgiiP 149 (359)
++++.+..+..+....+..+.+...++|.||+.+-|... ...+..+.. ..+|+-.+-
T Consensus 32 g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~-------------~~iPvV~~~ 89 (306)
T 8abp_A 32 GFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARG-------------YDMKVIAVD 89 (306)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHH-------------TTCEEEEES
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHH-------------CCCcEEEeC
Confidence 345544445444444556677777889999999988754 445665542 357776664
No 138
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=28.32 E-value=1.9e+02 Score=25.30 Aligned_cols=110 Identities=15% Similarity=0.221 Sum_probs=59.2
Q ss_pred CCCCCCcEEEEEcCCC--------CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc---CCCEEE
Q 018199 42 SSSRRRDLVFVVNPRG--------ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE---GADAVI 110 (359)
Q Consensus 42 ~~~~~~~~~iiiNP~S--------G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~---~~d~iv 110 (359)
...+++++.+|||-.. -...+....+.+...|+.. ++++.++.--...+..+.++++... .+|.+|
T Consensus 39 m~~~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~L---GF~V~~~~dlt~~em~~~l~~f~~~dh~~~d~~v 115 (277)
T 4ehd_A 39 MDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNL---KYEVRNKNDLTREEIVELMRDVSKEDHSKRSSFV 115 (277)
T ss_dssp CCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHTSCCTTEEEEE
T ss_pred CCCCCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHC---CCEEEEecCCCHHHHHHHHHHHHhhcccCCCEEE
Confidence 3556788888887321 1111223345566666653 4566666555666777777776543 234433
Q ss_pred -----------EEeCCch--HHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhhc
Q 018199 111 -----------AVGGDGT--LHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTF 160 (359)
Q Consensus 111 -----------v~GGDGT--v~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~l 160 (359)
++|=||. +.++.+-+-.... .....++.|-+|-+=-||.+.+.+
T Consensus 116 v~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~C------psL~gKPKlffiQACRG~~~~~g~ 172 (277)
T 4ehd_A 116 CVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRC------RSLTGKPKLFIIQACRGTELDCGI 172 (277)
T ss_dssp EEEESCEETTEEEETTEEEEHHHHHHTTSTTTC------GGGTTSCEEEEEESCCSSBCBCCC
T ss_pred EEEEcCCCCCEEEEeCCcEeHHHHHHHhhhccC------chhcCCccEEEEecCCCCcccCCc
Confidence 2344553 3454443321100 012356778888887777766543
No 139
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=28.26 E-value=2.8e+02 Score=23.64 Aligned_cols=78 Identities=8% Similarity=0.106 Sum_probs=41.5
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
+.+.+.+|+.-.+ ..-....++.+...+.+. ++.+.+..+.. .....++.+.+...++|.||+++.+.+-.+.+.
T Consensus 14 ~s~~Igvi~~~~~-~~~~~~~~~gi~~~a~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~ 89 (303)
T 3kke_A 14 RSGTIGLIVPDVN-NAVFADMFSGVQMAASGH---STDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLA 89 (303)
T ss_dssp ---CEEEEESCTT-STTHHHHHHHHHHHHHHT---TCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHH
T ss_pred CCCEEEEEeCCCc-ChHHHHHHHHHHHHHHHC---CCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHH
Confidence 4456777775432 211122333344444432 45555555543 233445666667788999999998877432555
Q ss_pred HhH
Q 018199 124 GFF 126 (359)
Q Consensus 124 gl~ 126 (359)
.+.
T Consensus 90 ~l~ 92 (303)
T 3kke_A 90 AVL 92 (303)
T ss_dssp HHH
T ss_pred HHh
Confidence 553
No 140
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=27.90 E-value=2.7e+02 Score=23.64 Aligned_cols=71 Identities=13% Similarity=0.087 Sum_probs=40.1
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT 117 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT 117 (359)
.+.+.+.+++...+...-....++.+...+.+. ++.+.+..+.. .....+..+.+...++|.||+++.+..
T Consensus 11 ~~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~ 82 (301)
T 3miz_A 11 SRSNTFGIITDYVSTTPYSVDIVRGIQDWANAN---GKTILIANTGGSSEREVEIWKMFQSHRIDGVLYVTMYRR 82 (301)
T ss_dssp -CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHT---TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred CCCCEEEEEeCCCcCcccHHHHHHHHHHHHHHC---CCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEecCCcc
Confidence 345667777754432222114444455555543 45555555543 333445666677789999999987754
No 141
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=27.85 E-value=2.5e+02 Score=24.28 Aligned_cols=78 Identities=13% Similarity=0.135 Sum_probs=43.1
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceE--EEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNIC--ESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~--~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
..+++.+|..+.. -+....+.+...+++. +..+. ........+....++++...++|+|++++-|.....++
T Consensus 137 g~~~i~~i~~~~~---~~~~~~~~~~~~l~~~---g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~i~~~~~~~~a~~~~ 210 (346)
T 1usg_A 137 KPQRIAIIHDKQQ---YGEGLARSVQDGLKAA---NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 210 (346)
T ss_dssp CCSSEEEEECSSH---HHHHHHHHHHHHHHHT---TCCEEEEEECCTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEEECCCc---hHHHHHHHHHHHHHHc---CCEEEEEeccCCCCcCHHHHHHHHHhcCCCEEEEcCcchHHHHHH
Confidence 4678998886421 1122233344455543 22222 12222223444566666667889998887566666777
Q ss_pred hHhHhC
Q 018199 123 NGFFSA 128 (359)
Q Consensus 123 ngl~~~ 128 (359)
..+.+.
T Consensus 211 ~~~~~~ 216 (346)
T 1usg_A 211 RQARSV 216 (346)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 777543
No 142
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=27.76 E-value=1.6e+02 Score=25.47 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=34.0
Q ss_pred CCcEEEEEc-CCCCCCchhhhHHHHHHHHHhccccccceEEEecCCc-hHHHHHHHHHHHcCCCEEEEEeC
Q 018199 46 RRDLVFVVN-PRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGP-SHAIDITREAIKEGADAVIAVGG 114 (359)
Q Consensus 46 ~~~~~iiiN-P~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~-~~a~~~~~~~~~~~~d~ivv~GG 114 (359)
..++.+|+. +...+.-....++.+...+++. ++++.+..+... .+..+..+.+...++|.|+++|.
T Consensus 5 ~~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~---g~~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~~ 72 (296)
T 2hqb_A 5 GGMVGLLVEDTIDDQGWNRKAYEGLLNIHSNL---DVDVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHGH 72 (296)
T ss_dssp -CEEEEECCCC----CCTHHHHHHHHHHHHHS---CCEEEEECCCCSHHHHHHHHHHHHHTTCCEEEECST
T ss_pred CcEEEEEECCCCCCCcHHHHHHHHHHHHHHHh---CCeEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcCH
Confidence 467778774 2321122233344444444442 344443334332 34445667777788999998864
No 143
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=27.68 E-value=2e+02 Score=25.16 Aligned_cols=77 Identities=9% Similarity=0.013 Sum_probs=41.7
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceE--EEecCCchHHHHHHHHHHHcCCCEEEEEeCCc-hHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNIC--ESLTSGPSHAIDITREAIKEGADAVIAVGGDG-TLHEV 121 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~--~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDG-Tv~ev 121 (359)
..+++.+|. +... .+....+.+...+++. ++.+. ........+....++++...++|+|+++ +|+ ....+
T Consensus 138 g~~~ia~i~-~~~~--~~~~~~~~~~~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~l~~~~~d~i~~~-~~~~~a~~~ 210 (358)
T 3hut_A 138 GFTSVAVIG-VTTD--WGLSSAQAFRKAFELR---GGAVVVNEEVPPGNRRFDDVIDEIEDEAPQAIYLA-MAYEDAAPF 210 (358)
T ss_dssp TCCEEEEEE-ESSH--HHHHHHHHHHHHHHHT---TCEEEEEEEECTTCCCCHHHHHHHHHHCCSEEEEE-SCHHHHHHH
T ss_pred CCCEEEEEe-cCcH--HHHHHHHHHHHHHHHc---CCEEEEEEecCCCCccHHHHHHHHHhcCCCEEEEc-cCchHHHHH
Confidence 457888886 3321 2223334445555553 22222 1222233344455666666778887766 555 77778
Q ss_pred HhHhHhC
Q 018199 122 VNGFFSA 128 (359)
Q Consensus 122 lngl~~~ 128 (359)
+..+.+.
T Consensus 211 ~~~~~~~ 217 (358)
T 3hut_A 211 LRALRAR 217 (358)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 8877654
No 144
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=27.51 E-value=33 Score=31.13 Aligned_cols=60 Identities=23% Similarity=0.310 Sum_probs=33.8
Q ss_pred cEEE-EEcCCCCCCch--hhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEE
Q 018199 48 DLVF-VVNPRGASGRT--GKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAV 112 (359)
Q Consensus 48 ~~~i-iiNP~SG~g~~--~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~ 112 (359)
|+.| =+||+||-+.. .+..+-+.|.+++.-..++++. +|--+..+-.+....+||.|++.
T Consensus 201 rIaV~GLNPHAGE~G~~G~EE~~iI~Pai~~~r~~Gi~~~-----GP~paDT~F~~~~~~~~D~vlaM 263 (328)
T 1yxo_A 201 RILVCGLNPHAGEGGHLGREEIEVIEPCLERLRGEGLDLI-----GPLPADTLFTPKHLEHCDAVLAM 263 (328)
T ss_dssp EEEEECSSGGGGTTTTTCSHHHHTHHHHHHHHHTTTCEEE-----EEECHHHHTSHHHHTTCSEEEES
T ss_pred CEEEEecCCCCCCCCCCCHhHHHHHHHHHHHHHHCCCcee-----CCCCchhhcccccccCCCEEEEc
Confidence 3444 48999987533 2333446788876543444331 23233333344455789999965
No 145
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=27.30 E-value=1.2e+02 Score=24.41 Aligned_cols=46 Identities=17% Similarity=0.119 Sum_probs=26.4
Q ss_pred HHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCc
Q 018199 69 LLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDG 116 (359)
Q Consensus 69 ~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDG 116 (359)
+...|.+. +.......+..+..+...+..+++.. ++|.|++.||=|
T Consensus 28 l~~~L~~~-G~~v~~~~iv~Dd~~~I~~~l~~a~~-~~DlVittGG~g 73 (172)
T 3kbq_A 28 IGNFLTYH-GYQVRRGFVVMDDLDEIGWAFRVALE-VSDLVVSSGGLG 73 (172)
T ss_dssp HHHHHHHT-TCEEEEEEEECSCHHHHHHHHHHHHH-HCSEEEEESCCS
T ss_pred HHHHHHHC-CCEEEEEEEeCCCHHHHHHHHHHHHh-cCCEEEEcCCCc
Confidence 44555553 22222222345566666666666554 499999999854
No 146
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=26.87 E-value=2.1e+02 Score=25.37 Aligned_cols=79 Identities=9% Similarity=0.030 Sum_probs=43.7
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCch--HHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPS--HAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~--~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
+.+.+.+|+.......-....|.++...+.+.+. ++.+.+..+.... ...+..+.+...++|.||+++-+.+ .+.+
T Consensus 67 ~s~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~-g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~-~~~~ 144 (366)
T 3h5t_A 67 RAGAIGVLLTEDLTYAFEDMASVDFLAGVAQAAG-DTQLTLIPASPASSVDHVSAQQLVNNAAVDGVVIYSVAKG-DPHI 144 (366)
T ss_dssp -CCEEEEEESSCTTHHHHSHHHHHHHHHHHHHSS-SCEEEEEECCCCTTCCHHHHHHHHHTCCCSCEEEESCCTT-CHHH
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHh-hCCEEEEEcCCCccHHHHHHHHHHHhCCCCEEEEecCCCC-hHHH
Confidence 3456777775432111112345566666666554 5666555544322 2445666667788999999876433 2444
Q ss_pred hHh
Q 018199 123 NGF 125 (359)
Q Consensus 123 ngl 125 (359)
..+
T Consensus 145 ~~l 147 (366)
T 3h5t_A 145 DAI 147 (366)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 147
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=26.84 E-value=1.4e+02 Score=24.08 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=21.2
Q ss_pred EecCCchHHHHHHHHHHHc-CCCEEEEEeCCc
Q 018199 86 SLTSGPSHAIDITREAIKE-GADAVIAVGGDG 116 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~~-~~d~ivv~GGDG 116 (359)
+..+..+...+..+++..+ ++|.||+.||=|
T Consensus 48 iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g 79 (178)
T 2pbq_A 48 VIPDERDLIEKTLIELADEKGCSLILTTGGTG 79 (178)
T ss_dssp EECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred EcCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4455555666666666553 799999999944
No 148
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=25.84 E-value=86 Score=25.27 Aligned_cols=45 Identities=16% Similarity=0.255 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.|+++.+.+...++ .||.-||.|-...+..+.++.+ ...+|++|.
T Consensus 21 ~A~~lg~~La~~g~-~lV~Ggg~GiM~aa~~gAl~~g------------G~tiGV~~~ 65 (171)
T 1weh_A 21 RWVRYGEVLAEEGF-GLACGGYQGGMEALARGVKAKG------------GLVVGVTAP 65 (171)
T ss_dssp HHHHHHHHHHHTTE-EEEECCSSTHHHHHHHHHHHTT------------CCEEECCCG
T ss_pred HHHHHHHHHHHCCC-EEEeCChhhHHHHHHHHHHHcC------------CcEEEEecc
Confidence 45566666655443 5566678888888888887543 468999885
No 149
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=25.80 E-value=1.6e+02 Score=25.12 Aligned_cols=77 Identities=13% Similarity=0.072 Sum_probs=41.9
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC---chHHHHHHHHHHHcCCCEEEEEeCCch-H
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG---PSHAIDITREAIKEGADAVIAVGGDGT-L 118 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~---~~~a~~~~~~~~~~~~d~ivv~GGDGT-v 118 (359)
.+.+++.+++.-.+ ...|.++...+++... .++++.+..+.. .....+.++.+...++|.||+.+.|.. +
T Consensus 3 ~~~~~Igvi~~~~~-----~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~ 77 (304)
T 3o1i_D 3 GSDEKICAIYPHLK-----DSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHAY 77 (304)
T ss_dssp --CCEEEEEESCSC-----SHHHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTSS
T ss_pred CCCcEEEEEeCCCC-----CcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhHH
Confidence 45667888775432 2334444444433321 135555555543 334445667777789999999988765 2
Q ss_pred HHHHhHh
Q 018199 119 HEVVNGF 125 (359)
Q Consensus 119 ~evlngl 125 (359)
.+.++.+
T Consensus 78 ~~~~~~~ 84 (304)
T 3o1i_D 78 EHNLKSW 84 (304)
T ss_dssp TTTHHHH
T ss_pred HHHHHHH
Confidence 3344443
No 150
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=25.79 E-value=1.1e+02 Score=26.76 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=36.7
Q ss_pred cEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecC------CchH----HHHHHHHHHHcCCCEEEEE-eCCc
Q 018199 48 DLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTS------GPSH----AIDITREAIKEGADAVIAV-GGDG 116 (359)
Q Consensus 48 ~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~------~~~~----a~~~~~~~~~~~~d~ivv~-GGDG 116 (359)
+-.-|+.|.|+-. .+..++....++.. ..++++....+. ..++ |.++.+.+...+.++|+++ ||+|
T Consensus 4 ~~I~ivaPSs~~~--~~~~~~~~~~l~~~-~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg 80 (274)
T 3g23_A 4 RRIAICAPSTPFT--REDSARVIALAAAE-FPDLSLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGYG 80 (274)
T ss_dssp EEEEEECSSSCCC--HHHHHHHHHHHHHH-CTTEEEEECGGGGCCSSSSSSCHHHHHHHHHHHHTCTTCSEEEESCCSSC
T ss_pred CEEEEEeCCCCCC--HHHHHHHHHHHHhc-cCCeEEEECcchhhccCccCCCHHHHHHHHHHHhhCCCCCEEEEeecccc
Confidence 4456789988643 23344444455542 013333321111 1222 3333333334667887765 9999
Q ss_pred hHHHHHhHh
Q 018199 117 TLHEVVNGF 125 (359)
Q Consensus 117 Tv~evlngl 125 (359)
+.. ++..|
T Consensus 81 a~r-lL~~l 88 (274)
T 3g23_A 81 ANR-IAEDA 88 (274)
T ss_dssp THH-HHHHH
T ss_pred HHH-HHHhh
Confidence 864 44444
No 151
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.74 E-value=86 Score=26.00 Aligned_cols=45 Identities=31% Similarity=0.500 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
.|+++.+.+...++. ||.-|+-|-.-.+..+.+..+ ...+|+||.
T Consensus 46 ~A~~lg~~LA~~G~~-vVsGg~~GiM~aa~~gAl~~G------------G~~iGVlP~ 90 (195)
T 1rcu_A 46 ICLELGRTLAKKGYL-VFNGGRDGVMELVSQGVREAG------------GTVVGILPD 90 (195)
T ss_dssp HHHHHHHHHHHTTCE-EEECCSSHHHHHHHHHHHHTT------------CCEEEEEST
T ss_pred HHHHHHHHHHHCCCE-EEeCCHHHHHHHHHHHHHHcC------------CcEEEEeCC
Confidence 456666776666653 444577777788888876533 468999986
No 152
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=25.73 E-value=2.6e+02 Score=22.54 Aligned_cols=58 Identities=16% Similarity=0.221 Sum_probs=31.9
Q ss_pred CCCCCcEEEEEcCC--------CCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHH
Q 018199 43 SSRRRDLVFVVNPR--------GASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIK 103 (359)
Q Consensus 43 ~~~~~~~~iiiNP~--------SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~ 103 (359)
...++.+.+|+|-. +-+..+....+.+...++.. ++++.++.--...+..+.++++..
T Consensus 40 ~~~~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~L---gF~V~v~~dlt~~em~~~l~~~s~ 105 (173)
T 2ql9_A 40 NFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSL---GFDVIVYNDCSCAKMQDLLKKASE 105 (173)
T ss_dssp CSSEEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHH---TEEEEEEESCCHHHHHHHHHHHHT
T ss_pred CCCCceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHH
Confidence 44567778888754 11111223344555556543 355665655566677777777654
No 153
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=25.71 E-value=2.3e+02 Score=23.90 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=18.0
Q ss_pred HHHHHHHHcCCCEEEEEeCCchHHHHHhHh
Q 018199 96 DITREAIKEGADAVIAVGGDGTLHEVVNGF 125 (359)
Q Consensus 96 ~~~~~~~~~~~d~ivv~GGDGTv~evlngl 125 (359)
+..+.+...++|.||+.+.+.+ .+.+..+
T Consensus 56 ~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l 84 (290)
T 3clk_A 56 HALLTAIERPVMGILLLSIALT-DDNLQLL 84 (290)
T ss_dssp CHHHHHHSSCCSEEEEESCC-----CHHHH
T ss_pred HHHHHHHhcCCCEEEEecccCC-HHHHHHH
Confidence 4556666678999999988765 2444444
No 154
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=25.51 E-value=2.6e+02 Score=22.92 Aligned_cols=66 Identities=9% Similarity=0.026 Sum_probs=34.3
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCc
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDG 116 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDG 116 (359)
.+.+.+++.-.+ ...|.++...+++.+. .++.+.+..+.. +....+..+.+...++|.||+.+.+.
T Consensus 2 s~~Igvi~~~~~-----~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~ 69 (255)
T 1byk_A 2 DKVVAIIVTRLD-----SLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTG 69 (255)
T ss_dssp CCEEEEEESCTT-----CHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCEEEEEeCCCC-----CccHHHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEecCcc
Confidence 356677764221 1234444444433321 234444444443 22333455666667899999998653
No 155
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=25.42 E-value=3.1e+02 Score=23.19 Aligned_cols=75 Identities=8% Similarity=-0.036 Sum_probs=40.7
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-ccc-ceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCch-HHHHH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDC-NICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGT-LHEVV 122 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~-~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evl 122 (359)
+++.+++. ... ...|..+...+.+... .++ ++.+..+.. .....+..+.+...++|.||+.+.|.+ ..+.+
T Consensus 3 ~~Igvi~~-~~~----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~ 77 (309)
T 2fvy_A 3 TRIGVTIY-KYD----DNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVI 77 (309)
T ss_dssp EEEEEEES-CTT----SHHHHHHHHHHHHHHHTCTTEEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHH
T ss_pred cEEEEEec-cCC----cHHHHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcchhHHHH
Confidence 45666663 321 1334444444443322 233 444444432 233345566677788999999998876 35666
Q ss_pred hHhH
Q 018199 123 NGFF 126 (359)
Q Consensus 123 ngl~ 126 (359)
..+.
T Consensus 78 ~~~~ 81 (309)
T 2fvy_A 78 EKAR 81 (309)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 156
>1nbw_B Glycerol dehydratase reactivase beta subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.51.3.2
Probab=25.19 E-value=2.2e+02 Score=21.42 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=42.5
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc-CCCEEEEEeCCchH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE-GADAVIAVGGDGTL 118 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~-~~d~ivv~GGDGTv 118 (359)
...+.|.+++..- ....|+++..-+++. ++.+.+.......++.+++.+++.. +--+=|.+..+||+
T Consensus 5 ~PaI~i~~~~~~~---~~~~l~~vl~GIEEE---Gip~~v~~~~~~~d~~~lA~~AA~~S~lgVGIGi~~~G~~ 72 (117)
T 1nbw_B 5 PPGVRLFYDPRGH---HAGAINELCWGLEEQ---GVPCQTITYDGGGDAAALGALAARSSPLRVGIGLSASGEI 72 (117)
T ss_dssp CCCEEEEECTTSC---CHHHHHHHHHHHHHT---TCCEEEEECTTCCCHHHHHHHHHHHCTTSEEEEECTTSEE
T ss_pred CCEEEEEeCCCCC---CHHHHHHHHhhhhhc---CCCeEEEEeCCCCCHHHHHHHHHHhCCCceEEEECCCCCE
Confidence 4457777766532 245678888888774 4555544433336788888887654 34455778888774
No 157
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=24.90 E-value=2.9e+02 Score=23.87 Aligned_cols=76 Identities=12% Similarity=0.095 Sum_probs=36.4
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCch-HHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPS-HAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~-~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
+.+.+.+++.-.+ ..-.....+.+...+.+. ++.+.+..+.... ...+..+.+...++|.||+.+.+.+- +.+.
T Consensus 59 ~~~~Ig~i~~~~~-~~~~~~~~~gi~~~a~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~ 133 (332)
T 2hsg_A 59 KTTTVGVIIPDIS-NIFYAELARGIEDIATMY---KYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTE-EHVE 133 (332)
T ss_dssp -CCEEEEEEC--C-CSHHHHHHHHHHHHHHHH---TCEEEEEECCSHHHHHHHHHHHTSCCSSCCEEECCSSCCH-HHHH
T ss_pred CCCEEEEEeCCCC-CcHHHHHHHHHHHHHHHc---CCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCH-HHHH
Confidence 4456777764322 111122223333333332 3444444443322 22334555556789999999887653 5555
Q ss_pred Hh
Q 018199 124 GF 125 (359)
Q Consensus 124 gl 125 (359)
.+
T Consensus 134 ~l 135 (332)
T 2hsg_A 134 EL 135 (332)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 158
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=24.80 E-value=50 Score=33.66 Aligned_cols=57 Identities=21% Similarity=0.138 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 94 AIDITREAIKEGADAVIAVGGDGTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 94 a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
..++++.+...+.|.+|++|||||+.-+. .|.+... ......+|+--||.==-||+.
T Consensus 473 ~~~~~~~l~~~~Id~LvvIGGdgS~~~a~-~L~~~~~------~~~~~~i~vvgiPkTIDNDl~ 529 (766)
T 3o8o_B 473 LGMIAYYFQKYEFDGLIIVGGFEAFESLH-QLERARE------SYPAFRIPMVLIPATLSNNVP 529 (766)
T ss_dssp HHHHHHHHHHHTCSEEEEEESHHHHHHHH-HHHTTTT------TCGGGCSCCCEEEBCTTCCCS
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHH-HHHHHHH------hcCccCCcEEeeccccccCCC
Confidence 44556666667899999999999987644 3432110 001236899999998899986
No 159
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=24.71 E-value=1.5e+02 Score=25.29 Aligned_cols=83 Identities=7% Similarity=0.043 Sum_probs=40.0
Q ss_pred CCCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCch-HHHHHHHHHHHcCCCEEEEEeCCchHHH
Q 018199 43 SSRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGPS-HAIDITREAIKEGADAVIAVGGDGTLHE 120 (359)
Q Consensus 43 ~~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~~-~a~~~~~~~~~~~~d~ivv~GGDGTv~e 120 (359)
..+.+.+.+|+.-..........|.++...+.+.+. .++.+.+..+.... ...++.+.+...++|.||+++.+.+ .+
T Consensus 4 ~~~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~ 82 (295)
T 3hcw_A 4 TNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEN-DP 82 (295)
T ss_dssp CCCSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTT-CH
T ss_pred CCCCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcccC-hH
Confidence 445667777773110000011234444444443322 23444433333322 2234455566678999999987754 24
Q ss_pred HHhHhH
Q 018199 121 VVNGFF 126 (359)
Q Consensus 121 vlngl~ 126 (359)
.+..+.
T Consensus 83 ~~~~l~ 88 (295)
T 3hcw_A 83 IKQMLI 88 (295)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 160
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=24.60 E-value=1.1e+02 Score=24.27 Aligned_cols=24 Identities=33% Similarity=0.479 Sum_probs=22.0
Q ss_pred cCCCEEEEEeCCchHHHHHhHhHh
Q 018199 104 EGADAVIAVGGDGTLHEVVNGFFS 127 (359)
Q Consensus 104 ~~~d~ivv~GGDGTv~evlngl~~ 127 (359)
..+|.+|++.|||=...+++.|-+
T Consensus 107 ~~~d~~vLvSgD~DF~plv~~lr~ 130 (165)
T 2qip_A 107 PDVDRVILVSGDGDFSLLVERIQQ 130 (165)
T ss_dssp GGCSEEEEECCCGGGHHHHHHHHH
T ss_pred ccCCEEEEEECChhHHHHHHHHHH
Confidence 679999999999999999999865
No 161
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=24.52 E-value=3.4e+02 Score=23.45 Aligned_cols=56 Identities=16% Similarity=0.090 Sum_probs=37.3
Q ss_pred HHHHHHHHcCCCEEEEEeCCc----hHHHHHhHhHhCCccccccccccCCcceEEEeeCcCh-hhhhhhcCCCC
Q 018199 96 DITREAIKEGADAVIAVGGDG----TLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTG-SDFARTFGWRN 164 (359)
Q Consensus 96 ~~~~~~~~~~~d~ivv~GGDG----Tv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTg-N~~Ar~lg~~~ 164 (359)
+.+.+...++-+++++++||= +..+.+..+. ...+++=+||.=|. +..+..+|+|.
T Consensus 84 ~~i~~~~~~g~~Vv~L~~GDP~i~g~~~~l~~~l~-------------~~gi~veviPGiSS~~aa~a~~G~pl 144 (285)
T 1cbf_A 84 GTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLK-------------REGVDIEIVPGVTSVFAAAAAAEAEL 144 (285)
T ss_dssp HHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHH-------------HTTCEEEEECCCCHHHHHHHHTTCCS
T ss_pred HHHHHHHHCCCeEEEEeCCCccccccHHHHHHHHH-------------HCCCcEEEECCchHHHHHHHHcCCCc
Confidence 333344445678999999994 4455665553 23588999998665 55566788874
No 162
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=24.50 E-value=2.1e+02 Score=24.22 Aligned_cols=30 Identities=7% Similarity=-0.217 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCCEEEEEeCCchHHHHHhHh
Q 018199 95 IDITREAIKEGADAVIAVGGDGTLHEVVNGF 125 (359)
Q Consensus 95 ~~~~~~~~~~~~d~ivv~GGDGTv~evlngl 125 (359)
.+..+.+...++|.||+.+.|.+- +.+..+
T Consensus 54 ~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l 83 (287)
T 3bbl_A 54 DIYRDLIRSGNVDGFVLSSINYND-PRVQFL 83 (287)
T ss_dssp HHHHHHHHTTCCSEEEECSCCTTC-HHHHHH
T ss_pred HHHHHHHHcCCCCEEEEeecCCCc-HHHHHH
Confidence 455666667889999999877542 455544
No 163
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=24.48 E-value=2.3e+02 Score=24.11 Aligned_cols=24 Identities=25% Similarity=0.275 Sum_probs=13.6
Q ss_pred HHHHcCCCEEE-EEeCCchHHHHHhH
Q 018199 100 EAIKEGADAVI-AVGGDGTLHEVVNG 124 (359)
Q Consensus 100 ~~~~~~~d~iv-v~GGDGTv~evlng 124 (359)
++..+++|.|| +|-.|-.+ +.+..
T Consensus 64 ~l~~~g~d~iviaCnt~~~l-~~lr~ 88 (245)
T 3qvl_A 64 AGREQGVDGHVIASFGDPGL-LAARE 88 (245)
T ss_dssp HHHHHTCSEEEEC-CCCTTH-HHHHH
T ss_pred HHHHCCCCEEEEeCCChhHH-HHHHH
Confidence 33456888665 56777666 44443
No 164
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=24.05 E-value=2.5e+02 Score=22.28 Aligned_cols=101 Identities=10% Similarity=0.074 Sum_probs=52.1
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHH-cCCCEEEEEe----CCch-
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIK-EGADAVIAVG----GDGT- 117 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~-~~~d~ivv~G----GDGT- 117 (359)
....|+.|+.-..- ..-..+..+.....|.+.....-+++++...+.-+.--.++++.. .+||.||+.| |+-.
T Consensus 8 ~~~~ri~IV~arfn-~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~H 86 (158)
T 1di0_A 8 KTSFKIAFIQARWH-ADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLARTGRYAAIVGAAFVIDGGIYD 86 (158)
T ss_dssp -CCEEEEEEEECTT-HHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEECCCCSSBC
T ss_pred CCCCEEEEEEEeCc-HHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeccccCCCcH
Confidence 34567888875431 000012222223344443211113445555565565555666654 5799999998 4332
Q ss_pred ----HHHHHhHhHhCCccccccccccCCcceEEEeeCcC
Q 018199 118 ----LHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGT 152 (359)
Q Consensus 118 ----v~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GT 152 (359)
-+++.+||++-. ......+-.|+|-..|
T Consensus 87 fd~Va~~vs~Gl~~v~-------L~~~vPV~~GVLT~~~ 118 (158)
T 1di0_A 87 HDFVATAVINGMMQVQ-------LETEVPVLSVVLTPHH 118 (158)
T ss_dssp CHHHHHHHHHHHHHHH-------HHHCCCEEEEEECBSS
T ss_pred HHHHHHHHHHHHHHHH-------hhcCCCEEEEecCCCC
Confidence 367778886421 2233455567776655
No 165
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=23.84 E-value=3.7e+02 Score=23.55 Aligned_cols=75 Identities=8% Similarity=0.057 Sum_probs=40.2
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
.+.+.+++.-.+ ...|.++...+.+.+. .++.+.+..+.. +....+..+.+...++|.||+++.+.+- +.+.
T Consensus 70 ~~~Igvi~~~~~-----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~-~~~~ 143 (355)
T 3e3m_A 70 SGFVGLLLPSLN-----NLHFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHTE-QTIR 143 (355)
T ss_dssp -CEEEEEESCSB-----CHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCCH-HHHH
T ss_pred CCEEEEEeCCCC-----chHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCH-HHHH
Confidence 345666654322 1234444444433321 245554444543 3334456666777899999999887764 4555
Q ss_pred HhH
Q 018199 124 GFF 126 (359)
Q Consensus 124 gl~ 126 (359)
.+.
T Consensus 144 ~l~ 146 (355)
T 3e3m_A 144 LLQ 146 (355)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 166
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=23.51 E-value=33 Score=31.20 Aligned_cols=61 Identities=25% Similarity=0.372 Sum_probs=34.3
Q ss_pred CcEEEE-EcCCCCCCch--hhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEE
Q 018199 47 RDLVFV-VNPRGASGRT--GKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAV 112 (359)
Q Consensus 47 ~~~~ii-iNP~SG~g~~--~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~ 112 (359)
.|+.|. +||+||.+.. .+..+.+.|.+++.-..++++. +|-.+..+-.+.....+|+||+.
T Consensus 205 PrIAV~gLNPHAGE~G~~G~EE~~iI~PAi~~lr~~Gi~~~-----GP~paDt~F~~~~~~~~D~vlaM 268 (334)
T 3lxy_A 205 PQIYVCGLNPHAGEGGHMGHEEIDTIIPALNTLRQQGINLI-----GPLPADTLFQPKYLQHADAVLAM 268 (334)
T ss_dssp CCEEEECSSGGGGGGGTTCSHHHHTHHHHHHHHHHTTCCEE-----EEECHHHHTSHHHHTTCSEEEES
T ss_pred CCEEEEecCCCCCCCCCCCchhHHHHHHHHHHHHHCCCcee-----CCCChHHhcChhhhccCCEEEEc
Confidence 456555 7999975432 2333446677765433344332 33334444444456789999976
No 167
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=23.23 E-value=3.7e+02 Score=23.36 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=40.7
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
+.+.+.+++ |.... ..|.++...+.+.+. .++.+.+..+.. +....+..+.+...++|.||+++-+.+- +.+
T Consensus 67 ~~~~Ig~i~-~~~~~----~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~~-~~~ 140 (344)
T 3kjx_A 67 RVNLVAVII-PSLSN----MVFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSE-AAR 140 (344)
T ss_dssp CCSEEEEEE-SCSSS----SSHHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCH-HHH
T ss_pred CCCEEEEEe-CCCCc----HHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCCH-HHH
Confidence 345677766 43222 234444444443332 245554444443 3334455666667889999999877654 455
Q ss_pred hHhH
Q 018199 123 NGFF 126 (359)
Q Consensus 123 ngl~ 126 (359)
..+.
T Consensus 141 ~~l~ 144 (344)
T 3kjx_A 141 AMLD 144 (344)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 168
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=23.04 E-value=3e+02 Score=22.19 Aligned_cols=53 Identities=6% Similarity=-0.024 Sum_probs=28.9
Q ss_pred CcEEEEEcCCC-----CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHH
Q 018199 47 RDLVFVVNPRG-----ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAI 102 (359)
Q Consensus 47 ~~~~iiiNP~S-----G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~ 102 (359)
+++.+|+|-.. -...+..-.+.+...|+.. ++++.++.--...+..+.++++.
T Consensus 43 ~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~L---gF~V~~~~dlt~~em~~~l~~f~ 100 (178)
T 2h54_A 43 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNL---GYSVDVKKNLTASDMTTELEAFA 100 (178)
T ss_dssp CCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHH
T ss_pred CCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHC---CCEEEEecCCCHHHHHHHHHHHH
Confidence 56666666542 1112233345566666653 45565555555667777777654
No 169
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=23.02 E-value=1.7e+02 Score=23.18 Aligned_cols=40 Identities=18% Similarity=0.300 Sum_probs=26.2
Q ss_pred EecCCchHHHHHHHHHHH-cCCCEEEEEeCCc-----hHHHHHhHh
Q 018199 86 SLTSGPSHAIDITREAIK-EGADAVIAVGGDG-----TLHEVVNGF 125 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~-~~~d~ivv~GGDG-----Tv~evlngl 125 (359)
+..+..+...+..+++.. +++|.||+.||=| -+.+++..+
T Consensus 51 iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~~a~~~~ 96 (167)
T 1uuy_A 51 VVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVTPEATKKV 96 (167)
T ss_dssp EECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 445555566666666654 4799999999864 245555554
No 170
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=23.02 E-value=3.3e+02 Score=23.85 Aligned_cols=75 Identities=9% Similarity=0.085 Sum_probs=39.5
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCc-hHHHHHHHHHHHcCCCEEEEEeCCchHHHHHh
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGP-SHAIDITREAIKEGADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~-~~a~~~~~~~~~~~~d~ivv~GGDGTv~evln 123 (359)
.+.+.+|+. ... ...|..+...+.+.+. .++.+.+..+... ....+..+.+...++|.||+.+.+.+ .+.+.
T Consensus 66 s~~Igvi~~-~~~----~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~ 139 (348)
T 3bil_A 66 SNTIGVIVP-SLI----NHYFAAMVTEIQSTASKAGLATIITNSNEDATTMSGSLEFLTSHGVDGIICVPNEEC-ANQLE 139 (348)
T ss_dssp --CEEEEES-CSS----SHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSCEEECCCGGG-HHHHH
T ss_pred CCEEEEEeC-CCC----CcHHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHH
Confidence 456777763 321 1234444443333221 2455554444432 23344566666788999999988766 45565
Q ss_pred HhH
Q 018199 124 GFF 126 (359)
Q Consensus 124 gl~ 126 (359)
.+.
T Consensus 140 ~l~ 142 (348)
T 3bil_A 140 DLQ 142 (348)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 171
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=22.39 E-value=2.9e+02 Score=24.48 Aligned_cols=98 Identities=7% Similarity=0.048 Sum_probs=44.3
Q ss_pred EEEEcC-C-CCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhHhHh
Q 018199 50 VFVVNP-R-GASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNGFFS 127 (359)
Q Consensus 50 ~iiiNP-~-SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlngl~~ 127 (359)
.+.++| . |.-++++. .+.....|... ++..++.+...+.+.++++. .++=|+-||||....=-+.|+.
T Consensus 69 ~i~l~~~~~ss~~kgEs-l~DTarvls~~----~D~iviR~~~~~~~~~lA~~-----~~vPVINag~g~~~HPtQ~LaD 138 (306)
T 4ekn_B 69 VITMTDLKSSSVAKGES-LIDTIRVISGY----ADIIVLRHPSEGAARLASEY-----SQVPIINAGDGSNQHPTQTLLD 138 (306)
T ss_dssp EEEECCCTTTTSSSSCC-HHHHHHHHHHH----CSEEEEECSSTTHHHHHHHH-----CSSCEEESCSSSSCCHHHHHHH
T ss_pred EEEcCCcccccCCCCCC-HHHHHHHHHHh----CcEEEEEcCChHHHHHHHHh-----CCCCEEeCCCCCCcCcHHHHHH
Confidence 355666 2 22233332 33334455543 24445666666655555443 2334788888842221111111
Q ss_pred CCccccccccccCCcceEEEeeCcChhhhhhh
Q 018199 128 AGKLVTNHNRESAHSTALGLIPLGTGSDFART 159 (359)
Q Consensus 128 ~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~ 159 (359)
--. +. .....-..+.++++-=+.-|..|+|
T Consensus 139 l~T-i~-e~~g~l~glkva~vGD~~~~rva~S 168 (306)
T 4ekn_B 139 LYT-IM-REIGRIDGIKIAFVGDLKYGRTVHS 168 (306)
T ss_dssp HHH-HH-HHHSCSTTCEEEEESCTTTCHHHHH
T ss_pred HHH-HH-HHhCCcCCCEEEEEcCCCCCcHHHH
Confidence 000 00 0000134678899876653445554
No 172
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=22.25 E-value=2.5e+02 Score=24.59 Aligned_cols=53 Identities=17% Similarity=0.124 Sum_probs=36.3
Q ss_pred HHHHHcCCCEEEEEeCCc----hHHHHHhHhHhCCccccccccccCCcceEEEeeCcC-hhhhhhhcCCCC
Q 018199 99 REAIKEGADAVIAVGGDG----TLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGT-GSDFARTFGWRN 164 (359)
Q Consensus 99 ~~~~~~~~d~ivv~GGDG----Tv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GT-gN~~Ar~lg~~~ 164 (359)
.+...++-+++++.+||= +-.+.+..+.+ ..+++=+||.=| ....+..+|+|.
T Consensus 96 ~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~-------------~gi~vevIPGiSS~~aa~a~~Gipl 153 (294)
T 2ybo_A 96 VRLARQQRRVVRLKGGDPFIFGRGAEELERLLE-------------AGVDCQVVPGVTAASGCSTYAGIPL 153 (294)
T ss_dssp HHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHH-------------TTCCEEEECCCCHHHHHHHHTTCCS
T ss_pred HHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHH-------------CCCCEEEECCHHHHHHHHHHcCCCc
Confidence 334456678999999994 45566666532 358899999855 455567788874
No 173
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=22.14 E-value=3.5e+02 Score=22.61 Aligned_cols=77 Identities=6% Similarity=-0.064 Sum_probs=38.2
Q ss_pred CCCcEEEEEcCC-CCCCchhhhHHHHHHHHHhccccccceEEEecCC-chHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPR-GASGRTGKEWKKLLPYLRSRLSVDCNICESLTSG-PSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~-SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~-~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
+.+++.+++.-. ....-....++.+...+.+. ++++.+..+.. +....+..+.+...++|.||+.+.|.+ .+.+
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~ 93 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEK---GRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLS-VDEI 93 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHT---TCEEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSSSC-HHHH
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCCCC-hHHH
Confidence 345677776430 11111122223333333332 34444444332 233345566677788999999998755 3445
Q ss_pred hHh
Q 018199 123 NGF 125 (359)
Q Consensus 123 ngl 125 (359)
..+
T Consensus 94 ~~l 96 (296)
T 3brq_A 94 DDI 96 (296)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 174
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=21.90 E-value=1.8e+02 Score=24.71 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCEEEEEeCCchH----HHHHhHhHhCCccccccccccCCcceEEEeeCcCh-hhhhhhcCCCC
Q 018199 96 DITREAIKEGADAVIAVGGDGTL----HEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTG-SDFARTFGWRN 164 (359)
Q Consensus 96 ~~~~~~~~~~~d~ivv~GGDGTv----~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTg-N~~Ar~lg~~~ 164 (359)
+.+.+...++-+++++++||=.+ .+++..+. ...+++=+||.=|. ...+..+|+|.
T Consensus 87 ~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~-------------~~gi~v~viPGiSs~~aa~a~~G~pl 147 (259)
T 2e0n_A 87 ASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERAR-------------RDGLDCSMTPGIPAFIAAGSAAGMPL 147 (259)
T ss_dssp HHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHH-------------TTTCCEEEECCCCHHHHHHHHTTCCS
T ss_pred HHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHH-------------HCCCCEEEeCChhHHHHHHHhcCCCC
Confidence 33344445667899999999555 55555553 23488999998654 44556678774
No 175
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.85 E-value=2.1e+02 Score=19.92 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=33.1
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIK 103 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~ 103 (359)
..+++.+++|-.|. ....+.....+. .+..|.+..++.|++....+++...
T Consensus 50 ngkplvvfvngasq-----ndvnefqneakk---egvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQ-----NDVNEFQNEAKK---EGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCH-----HHHHHHHHHHHH---HTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCccc-----ccHHHHHHHHHh---cCcchhhhccCCHHHHHHHHHHHHH
Confidence 45789999997762 222333333333 2456777888889888888887654
No 176
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=21.61 E-value=3.9e+02 Score=22.96 Aligned_cols=75 Identities=11% Similarity=0.067 Sum_probs=40.0
Q ss_pred CcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEe-cC-CchHHHHHHHHHHHcCCCEEEEEeCCch-HHHHH
Q 018199 47 RDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESL-TS-GPSHAIDITREAIKEGADAVIAVGGDGT-LHEVV 122 (359)
Q Consensus 47 ~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~-t~-~~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evl 122 (359)
+++.+++ |..+. ..|..+...+++... .++++.+.. +. .+....+.++.+...++|.||+.+-|.+ +..++
T Consensus 4 ~~Igvi~-~~~~~----~~~~~~~~g~~~~~~~~g~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~~~~~~ 78 (316)
T 1tjy_A 4 ERIAFIP-KLVGV----GFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPAL 78 (316)
T ss_dssp CEEEEEC-SSSSS----HHHHHHHHHHHHHHHHHTCEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHH
T ss_pred CEEEEEe-CCCCC----hHHHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHH
Confidence 4566655 54332 334444444443221 134443321 22 2233345566777789999999998875 35666
Q ss_pred hHhH
Q 018199 123 NGFF 126 (359)
Q Consensus 123 ngl~ 126 (359)
..+.
T Consensus 79 ~~a~ 82 (316)
T 1tjy_A 79 KRAM 82 (316)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 177
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=21.57 E-value=3.8e+02 Score=22.90 Aligned_cols=87 Identities=10% Similarity=0.143 Sum_probs=48.3
Q ss_pred CCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCc-hHHHHHHHHHHHcCCCEEEEEeCCch-HHHHH
Q 018199 46 RRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGP-SHAIDITREAIKEGADAVIAVGGDGT-LHEVV 122 (359)
Q Consensus 46 ~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~-~~a~~~~~~~~~~~~d~ivv~GGDGT-v~evl 122 (359)
.+++.+++...+ . ..|..+...+.+.+. .++++.+..+... ....+..+.+...++|.||+.+-|.+ ..+.+
T Consensus 3 ~~~Igvi~~~~~-~----~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~ 77 (330)
T 3uug_A 3 KGSVGIAMPTKS-S----ARWIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVL 77 (330)
T ss_dssp CCEEEEEECCSS-S----THHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHH
T ss_pred CcEEEEEeCCCc-c----hHHHHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHH
Confidence 456667665432 2 233344333333221 2345544444432 23345566677788999999999864 46667
Q ss_pred hHhHhCCccccccccccCCcceEEEeeC
Q 018199 123 NGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 123 ngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
..+.. ..+|+..+-.
T Consensus 78 ~~~~~-------------~giPvV~~~~ 92 (330)
T 3uug_A 78 KQAGE-------------QGIKVIAYDR 92 (330)
T ss_dssp HHHHH-------------TTCEEEEESS
T ss_pred HHHHH-------------CCCCEEEECC
Confidence 66643 3577776644
No 178
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=21.49 E-value=1.3e+02 Score=30.17 Aligned_cols=100 Identities=12% Similarity=0.082 Sum_probs=52.3
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCC-c------
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGD-G------ 116 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGD-G------ 116 (359)
-..+|+.|++.+.-| -.......+...|++. ++++.++-.+....+.....+.....||+||+.||- |
T Consensus 527 l~g~kVaIL~a~~dG--fe~~E~~~~~~~L~~a---G~~V~vVs~~~g~~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~ 601 (688)
T 2iuf_A 527 LDGLKVGLLASVNKP--ASIAQGAKLQVALSSV---GVDVVVVAERXANNVDETYSASDAVQFDAVVVADGAEGLFGADS 601 (688)
T ss_dssp CTTCEEEEECCTTCH--HHHHHHHHHHHHHGGG---TCEEEEEESSCCTTCCEESTTCCGGGCSEEEECTTCGGGCCTTT
T ss_pred CCCCEEEEEecCCCC--CcHHHHHHHHHHHHHC---CCEEEEEeccCCcccccchhcCCccccCeEEecCCCcccccccc
Confidence 345789999864222 1122233455566654 455554433221111111111223569999999993 3
Q ss_pred ------------------hHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhhcCCC
Q 018199 117 ------------------TLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFGWR 163 (359)
Q Consensus 117 ------------------Tv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~lg~~ 163 (359)
.+-+++...++. .-+||.|-.|.. .| ...|+.
T Consensus 602 ~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~-------------gKpIaAIc~ap~-vL-~~aGi~ 651 (688)
T 2iuf_A 602 FTVEPSAGSGASTLYPAGRPLNILLDAFRF-------------GKTVGALGSGSD-AL-ESGQIS 651 (688)
T ss_dssp TTCCCCTTSCCCSSSCTTHHHHHHHHHHHH-------------TCEEEEEGGGHH-HH-HHTTCC
T ss_pred cccccccccchhhcccChHHHHHHHHHHHc-------------CCEEEEECchHH-HH-HHcCCC
Confidence 355555555543 357888877764 33 345664
No 179
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=21.47 E-value=3.6e+02 Score=22.57 Aligned_cols=76 Identities=11% Similarity=0.010 Sum_probs=38.7
Q ss_pred CCCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecCCc-hHHHHHHHHHHHcCCCEEEEEeCCchHHHH
Q 018199 44 SRRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTSGP-SHAIDITREAIKEGADAVIAVGGDGTLHEV 121 (359)
Q Consensus 44 ~~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~~~-~~a~~~~~~~~~~~~d~ivv~GGDGTv~ev 121 (359)
.+.+++.+++ |... ...|..+...+.+.+. .++.+.+..+... ....+..+.+...++|.||+.+.+-+ .+.
T Consensus 6 ~~~~~Igvi~-~~~~----~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~ 79 (285)
T 3c3k_A 6 AKTGMLLVMV-SNIA----NPFCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSE-LPE 79 (285)
T ss_dssp -CCCEEEEEE-SCTT----SHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGG-HHH
T ss_pred CCCCEEEEEe-CCCC----CchHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHH
Confidence 3445677766 4322 1233444433333221 2345544444332 22344556666778999999987754 344
Q ss_pred HhHh
Q 018199 122 VNGF 125 (359)
Q Consensus 122 lngl 125 (359)
+..+
T Consensus 80 ~~~l 83 (285)
T 3c3k_A 80 LQNI 83 (285)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 180
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=21.44 E-value=3.6e+02 Score=22.51 Aligned_cols=78 Identities=10% Similarity=0.102 Sum_probs=39.1
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccc-cccceEEEecC---CchHHHHHHHHHHHcCCCEEEEEeCCch-HH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLS-VDCNICESLTS---GPSHAIDITREAIKEGADAVIAVGGDGT-LH 119 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~---~~~~a~~~~~~~~~~~~d~ivv~GGDGT-v~ 119 (359)
+.+++.+++ |..+. ....|.++...+++... .++.+.+..+. .+....+..+.+...++|.||+.+.|.+ +.
T Consensus 4 ~~~~Ig~v~-~~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~ 80 (289)
T 3brs_A 4 KQYYMICIP-KVLDD--SSDFWSVLVEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTY 80 (289)
T ss_dssp -CCEEEEEC-SCCCS--SSHHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTH
T ss_pred CCcEEEEEe-CCCCC--CchHHHHHHHHHHHHHHHcCCEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhH
Confidence 445666665 43220 01334444444333221 13444433331 2233445666777788999999988764 23
Q ss_pred HHHhHh
Q 018199 120 EVVNGF 125 (359)
Q Consensus 120 evlngl 125 (359)
+.+..+
T Consensus 81 ~~~~~~ 86 (289)
T 3brs_A 81 DAAKEI 86 (289)
T ss_dssp HHHTTT
T ss_pred HHHHHH
Confidence 555544
No 181
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=21.32 E-value=4e+02 Score=23.07 Aligned_cols=110 Identities=12% Similarity=0.074 Sum_probs=58.9
Q ss_pred CCCCCcEEEEEcCCC--------CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc---CCCEEEE
Q 018199 43 SSRRRDLVFVVNPRG--------ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE---GADAVIA 111 (359)
Q Consensus 43 ~~~~~~~~iiiNP~S--------G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~---~~d~ivv 111 (359)
..+++++.+|||-.. -+..+....+.+...|+.. ++++.++.--...+..+.++++... .+|.+|+
T Consensus 17 ~~~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~L---GF~V~~~~dlt~~em~~~l~~~~~~~h~~~d~~vv 93 (278)
T 3od5_A 17 DHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDL---GFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVC 93 (278)
T ss_dssp CSSBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHHSCCTTBSCEEE
T ss_pred CCCCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHC---CCEEEEecCCCHHHHHHHHHHHHhhcccCCCEEEE
Confidence 455777777776542 1111223345566666653 4566666555666777777776543 3453332
Q ss_pred -----------EeCCch--HHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhhcC
Q 018199 112 -----------VGGDGT--LHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTFG 161 (359)
Q Consensus 112 -----------~GGDGT--v~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~lg 161 (359)
+|=||. +.++.+-+-.... .....++.|-+|-+=-||.+.+.+.
T Consensus 94 ~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~C------psL~gKPKlffiQACRG~~~~~g~~ 150 (278)
T 3od5_A 94 VFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKC------HSLVGKPKIFIIQACRGNQHDVPVI 150 (278)
T ss_dssp EEESCEETTEEECSSSEEEHHHHHHTTSTTTC------GGGTTSCEEEEEESCCSSBCBCEEC
T ss_pred EEECCCCCCEEEEeCCeEEHHHHHHHhccccC------hhhcCCCcEEEEecCCCCcccCCee
Confidence 344554 3444443321100 0123567788888877777766544
No 182
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=21.16 E-value=3.9e+02 Score=22.78 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCch-HHHHHhHhH
Q 018199 93 HAIDITREAIKEGADAVIAVGGDGT-LHEVVNGFF 126 (359)
Q Consensus 93 ~a~~~~~~~~~~~~d~ivv~GGDGT-v~evlngl~ 126 (359)
...+.++.+...++|.||+.+.|.+ +.+.+..+.
T Consensus 45 ~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 79 (313)
T 2h3h_A 45 AQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKAL 79 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHH
Confidence 3445566777788999999988764 345666553
No 183
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=21.04 E-value=3.5e+02 Score=22.27 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcC-CCEEEEEeCCc-hHHHHHhHhHhCCccccccccccCCcceEEEeeC
Q 018199 94 AIDITREAIKEG-ADAVIAVGGDG-TLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPL 150 (359)
Q Consensus 94 a~~~~~~~~~~~-~d~ivv~GGDG-Tv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~ 150 (359)
..+..+.+...+ +|.||+.+-|. ...+.+..+.. ..+|+-.+-.
T Consensus 47 ~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~-------------~~ipvV~~~~ 92 (276)
T 3ksm_A 47 QIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRA-------------RNIPVLVVDS 92 (276)
T ss_dssp HHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHH-------------TTCCEEEESS
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHH-------------CCCcEEEEec
Confidence 345566777778 99999999774 45566666643 3567766643
No 184
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=20.92 E-value=4.3e+02 Score=23.28 Aligned_cols=80 Identities=8% Similarity=-0.088 Sum_probs=45.0
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEE--EecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICE--SLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVV 122 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~--~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evl 122 (359)
..+++.+|+ +... -+....+.+...+++.. .++.+.. .......+....+.++...+.|+|++++-+.....++
T Consensus 141 g~~~vaii~-~~~~--~g~~~~~~~~~~l~~~~-~g~~vv~~~~~~~~~~d~~~~~~~i~~~~~d~v~~~~~~~~~~~~~ 216 (387)
T 3i45_A 141 PITRWATIA-PNYE--YGQSAVARFKELLLAAR-PEVTFVAEQWPALYKLDAGPTVQALQQAEPEGLFNVLFGADLPKFV 216 (387)
T ss_dssp SCCEEEEEC-CSSH--HHHHHHHHHHHHHHHHC-TTCEEEEEECCCTTCCCHHHHHHHHHHTCCSEEEECCCTTHHHHHH
T ss_pred CCCeEEEEe-CCch--HhHHHHHHHHHHHHHhC-CCcEEEeeecCCCCCcCHHHHHHHHHhCCCCEEEEcCccHHHHHHH
Confidence 457888877 3221 11222333444555431 1223221 1222334566677777778899999988777777888
Q ss_pred hHhHhC
Q 018199 123 NGFFSA 128 (359)
Q Consensus 123 ngl~~~ 128 (359)
..+.+.
T Consensus 217 ~~~~~~ 222 (387)
T 3i45_A 217 REGRVR 222 (387)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 777543
No 185
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=20.90 E-value=4.1e+02 Score=23.64 Aligned_cols=19 Identities=37% Similarity=0.342 Sum_probs=15.2
Q ss_pred CCCEEEEEeCCchHHHHHh
Q 018199 105 GADAVIAVGGDGTLHEVVN 123 (359)
Q Consensus 105 ~~d~ivv~GGDGTv~evln 123 (359)
..|++|.-+|=+|+.|++-
T Consensus 252 ~aDlvI~raG~~Tv~E~~a 270 (365)
T 3s2u_A 252 WADLVICRAGALTVSELTA 270 (365)
T ss_dssp HCSEEEECCCHHHHHHHHH
T ss_pred cceEEEecCCcchHHHHHH
Confidence 4678888788899998874
No 186
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=20.85 E-value=2.6e+02 Score=24.60 Aligned_cols=80 Identities=10% Similarity=-0.018 Sum_probs=42.1
Q ss_pred CCCcEEEEEcCCCCCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHcCCCEEEEEeCCchHHHHHhH
Q 018199 45 RRRDLVFVVNPRGASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKEGADAVIAVGGDGTLHEVVNG 124 (359)
Q Consensus 45 ~~~~~~iiiNP~SG~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~~~d~ivv~GGDGTv~evlng 124 (359)
..+++.+|.. ... -+....+.+...+++... .+...........+....+.++...++|+|++++-+.....+++.
T Consensus 158 g~~~ia~i~~-~~~--~~~~~~~~~~~~l~~~g~-~v~~~~~~~~~~~d~~~~~~~~~~~~~dav~~~~~~~~a~~~~~~ 233 (386)
T 3sg0_A 158 GAKKVGYIGF-SDA--YGEGYYKVLAAAAPKLGF-ELTTHEVYARSDASVTGQVLKIIATKPDAVFIASAGTPAVLPQKA 233 (386)
T ss_dssp TCCEEEEEEE-SSH--HHHHHHHHHHHHHHHHTC-EECCCEEECTTCSCCHHHHHHHHHTCCSEEEEECCSGGGHHHHHH
T ss_pred CCCEEEEEec-Cch--HHHHHHHHHHHHHHHcCC-EEEEEEeeCCCCCcHHHHHHHHHhcCCCEEEEecCcchHHHHHHH
Confidence 4578888853 221 122233344455554321 111111222223344455666666789998887755666778887
Q ss_pred hHhC
Q 018199 125 FFSA 128 (359)
Q Consensus 125 l~~~ 128 (359)
+.+.
T Consensus 234 ~~~~ 237 (386)
T 3sg0_A 234 LRER 237 (386)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 7654
No 187
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=20.85 E-value=3.3e+02 Score=23.17 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=58.6
Q ss_pred CCCCCcEEEEEcCCCC--------CCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHHc---CCCEEEE
Q 018199 43 SSRRRDLVFVVNPRGA--------SGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIKE---GADAVIA 111 (359)
Q Consensus 43 ~~~~~~~~iiiNP~SG--------~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~~---~~d~ivv 111 (359)
...++++.+|||-..= ...+....+.+...|++. ++++.++.--...+..+.++++... .+|.+|+
T Consensus 12 ~~~~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~L---gF~V~~~~dlt~~em~~~l~~~~~~~~~~~d~~v~ 88 (250)
T 2j32_A 12 DYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNL---KYEVRNKNDLTREEIVELMRDVSKEDHSKRSSFVC 88 (250)
T ss_dssp CSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHTSCCTTEEEEEE
T ss_pred CCCCccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHHhhccCCCEEEE
Confidence 4556777777775311 111223345566666653 4566666555666777777776543 2443333
Q ss_pred E----eC-------Cc--hHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhhhhc
Q 018199 112 V----GG-------DG--TLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFARTF 160 (359)
Q Consensus 112 ~----GG-------DG--Tv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~Ar~l 160 (359)
+ |. || .+.++.+-+-.... .....++.|-+|-+=-||.+.+..
T Consensus 89 ~~lsHG~~g~i~~~D~~v~l~~i~~~f~~~~c------p~L~gKPKlf~iqACRg~~~~~g~ 144 (250)
T 2j32_A 89 VLLSHGEEGIIFGTNGPVDLKKITNFFRGDRC------RSLTGKPKLFIIQACRGTELDCGI 144 (250)
T ss_dssp EEESCEETTEEEETTEEEEHHHHHHTTSTTTC------GGGTTSCEEEEEESCSEEECBCCC
T ss_pred EECCCCCCCeEEecCCcEEHHHHHHHhccccC------hhHcCCCeEEEEecccCCcccCCc
Confidence 2 33 43 44555554421100 012456788899888888776543
No 188
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=20.35 E-value=2.6e+02 Score=23.33 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=35.7
Q ss_pred HHHHHHcCCCEEEEEeCCchH----HHHHhHhHhCCccccccccccCCcceEEEeeCcC-hhhhhhhcCCCC
Q 018199 98 TREAIKEGADAVIAVGGDGTL----HEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGT-GSDFARTFGWRN 164 (359)
Q Consensus 98 ~~~~~~~~~d~ivv~GGDGTv----~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GT-gN~~Ar~lg~~~ 164 (359)
+.+...++-+++++.+||=.+ .+++..+.+ ..+++=++|.=| ....+..+|+|.
T Consensus 71 i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~-------------~gi~v~viPGiSs~~aa~a~~g~pl 129 (235)
T 1ve2_A 71 LIALAREGRVVARLKGGDPMVFGRGGEEALALRR-------------AGIPFEVVPGVTSAVGALSALGLPL 129 (235)
T ss_dssp HHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHH-------------HTCCEEEECCCCTTHHHHHHTTCCS
T ss_pred HHHHHHcCCeEEEEcCCCCCcccCHHHHHHHHHH-------------CCCCEEEECCHhHHHHHHHHcCCCc
Confidence 334445667888889999544 555555432 247899999865 455667788873
No 189
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=20.34 E-value=2e+02 Score=24.47 Aligned_cols=57 Identities=19% Similarity=0.177 Sum_probs=36.7
Q ss_pred HHHHHcCCCEEEEEeCC----chHHHHHhHhHhCCccccccccccCCcceEEEeeCcCh-hhhhhhcCCCC
Q 018199 99 REAIKEGADAVIAVGGD----GTLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTG-SDFARTFGWRN 164 (359)
Q Consensus 99 ~~~~~~~~d~ivv~GGD----GTv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTg-N~~Ar~lg~~~ 164 (359)
.+...++-+++++.+|| |+-.+.+..+.+.. ....+++=+||.=|+ ...+..+|+|.
T Consensus 72 i~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~---------~~~gi~veviPGiSS~~aa~a~~G~pl 133 (251)
T 3nut_A 72 LEMAAEGRRVVVVSSGDPGVFAMASALFEALEAHP---------EHAGTEIRILPGITAMLAAAAAAGAPL 133 (251)
T ss_dssp HHHHHTTCEEEEEESBCTTSSSHHHHHHHHHHHCG---------GGTTCCEEEECCCCHHHHHHHHHEETT
T ss_pred HHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhhc---------ccCCCcEEEECCHHHHHHHHHHhCCCc
Confidence 33445677889999999 56666776664210 013578999998654 55556667663
No 190
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=20.33 E-value=2.1e+02 Score=23.42 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=21.7
Q ss_pred EecCCchHHHHHHHHHHHc-CCCEEEEEeCCc
Q 018199 86 SLTSGPSHAIDITREAIKE-GADAVIAVGGDG 116 (359)
Q Consensus 86 ~~t~~~~~a~~~~~~~~~~-~~d~ivv~GGDG 116 (359)
+..+..+...+..+++..+ ++|+|++.||=|
T Consensus 46 iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg 77 (195)
T 1di6_A 46 LIPDEQAIIEQTLCELVDEMSCHLVLTTGGTG 77 (195)
T ss_dssp EEESCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred EeCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4455555666666666553 799999999965
No 191
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=20.17 E-value=4.3e+02 Score=23.25 Aligned_cols=102 Identities=9% Similarity=0.062 Sum_probs=52.1
Q ss_pred CcEEEEEcCCC-----CCCchhhhHHHHHHHHHhccccccceEEEecCCchHHHHHHHHHHH----cCCCEEEE------
Q 018199 47 RDLVFVVNPRG-----ASGRTGKEWKKLLPYLRSRLSVDCNICESLTSGPSHAIDITREAIK----EGADAVIA------ 111 (359)
Q Consensus 47 ~~~~iiiNP~S-----G~g~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~~~a~~~~~~~~~----~~~d~ivv------ 111 (359)
+++.+|+|-.. -...+....+.+...|+.. ++++.++.--...+..+.++++.. .++|.+|+
T Consensus 60 ~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~L---GF~V~~~~dlt~~em~~~l~~f~~~~dh~~~d~~vv~~lsHG 136 (302)
T 3e4c_A 60 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNL---GYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHG 136 (302)
T ss_dssp CCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHTCGGGGGCSCEEEEEEEEE
T ss_pred ccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHHC---CCEEEEeeCCCHHHHHHHHHHHHhhhccCCCCEEEEEEeccC
Confidence 56666666542 1112233345566666653 456666655566677777777643 23554432
Q ss_pred -----EeCCc--------hHHHHHhHhHhCCccccccccccCCcceEEEeeCcChhhhh
Q 018199 112 -----VGGDG--------TLHEVVNGFFSAGKLVTNHNRESAHSTALGLIPLGTGSDFA 157 (359)
Q Consensus 112 -----~GGDG--------Tv~evlngl~~~~~~~~~~~~~~~~~~~lgiiP~GTgN~~A 157 (359)
.|=|+ .+.++.+-+-.... .....++.|-+|-+=-||.+.
T Consensus 137 ~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~C------psL~gKPKlffIQACRG~~~~ 189 (302)
T 3e4c_A 137 IREGICGKKHSEQVPDILQLNAIFNMLNTKNC------PSLKDKPKVIIIQAARGDSPG 189 (302)
T ss_dssp ETTEEECTTCCSSSCCEECHHHHHHHTSTTTC------GGGTTSCEEEEEEEECSSSCC
T ss_pred cCCeEEeecccccCCcEEEHHHHHHHHhhhcc------hhhcCCccEEEEECCCCCCCC
Confidence 23343 24555554421100 012345677777776666653
Done!