BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018201
         (359 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8H1F2|RGS1_ARATH Regulator of G-protein signaling 1 OS=Arabidopsis thaliana GN=RGS1
           PE=1 SV=1
          Length = 459

 Score =  534 bits (1376), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 243/356 (68%), Positives = 301/356 (84%)

Query: 3   GSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFN 62
            SGCA+ GGCP+DY+A+AI+ + F +LL+R +LP ++HK PRT SS FWIPVIQV +SFN
Sbjct: 2   ASGCALHGGCPSDYVAVAISVICFFVLLSRSVLPCLIHKAPRTNSSSFWIPVIQVISSFN 61

Query: 63  LLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLP 122
           LL S+++S N L+F+ + WW+ CY+W VWIEGPLGFGLLMSCRI QAFQLY+IFV+K LP
Sbjct: 62  LLFSIMMSVNLLRFRTKHWWRYCYLWAVWIEGPLGFGLLMSCRITQAFQLYFIFVKKRLP 121

Query: 123 PIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAI 182
           P++SY+FLPLVL+PW+  A  I   +PLND+CHM + W  P   LH +YV +L+ F  A+
Sbjct: 122 PVKSYIFLPLVLLPWIFGAAIIHATKPLNDKCHMGLQWTFPVAGLHALYVLALIAFTRAV 181

Query: 183 RHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVV 242
           RH+EFRFDELRDLW+GI+VSA+SI +WV A++LNEIH++ISWLQVASRF+LLV GGILVV
Sbjct: 182 RHVEFRFDELRDLWKGILVSATSIVIWVTAFVLNEIHEEISWLQVASRFVLLVTGGILVV 241

Query: 243 VFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLL 302
           VFFSISS++PLLSQISL+KR+  EF+ MGQALGIPDSGLL R+E    +DPNEPLDKLLL
Sbjct: 242 VFFSISSNQPLLSQISLKKRQNFEFQRMGQALGIPDSGLLFRKEEFRPVDPNEPLDKLLL 301

Query: 303 NKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           NK+FR SFM FADSC AGE++HFFEEV+EHGKIP DD +RRIYMARHI+EK+IVAG
Sbjct: 302 NKRFRHSFMEFADSCYAGETLHFFEEVYEHGKIPEDDSIRRIYMARHIMEKFIVAG 357


>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2
          Length = 715

 Score = 32.3 bits (72), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)

Query: 271 GQALGIPDSGLLLRREPTPVI-DPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEV 329
           G AL  P +       P PV+  P++ LD   + K++        +SCL      + +E 
Sbjct: 219 GDALSSPSA-------PEPVVGTPDDKLDADYI-KRYLGDLTPLQESCLI-RLRQWLQET 269

Query: 330 HEHGKIPVDDHVRRIYMAR 348
           H+ GKIP D+H+ R   AR
Sbjct: 270 HK-GKIPKDEHILRFLRAR 287


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.332    0.145    0.469 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,454,279
Number of Sequences: 539616
Number of extensions: 5240492
Number of successful extensions: 13917
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 13913
Number of HSP's gapped (non-prelim): 13
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 62 (28.5 bits)