Query 018202
Match_columns 359
No_of_seqs 173 out of 239
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 11:32:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018202.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018202hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fzta1 a.46.3.1 (A:1-78) Hypo 53.3 33 0.0024 24.1 9.3 27 101-127 49-75 (78)
2 d1fxka_ a.2.5.1 (A:) Prefoldin 48.2 46 0.0033 24.3 11.8 34 34-67 3-36 (107)
3 d1fxkc_ a.2.5.1 (C:) Prefoldin 45.7 55 0.004 24.4 10.8 20 102-121 88-107 (133)
4 d1fxka_ a.2.5.1 (A:) Prefoldin 33.7 80 0.0058 22.8 10.0 25 100-124 63-87 (107)
5 d2efka1 a.238.1.4 (A:10-288) C 27.9 1.4E+02 0.01 23.9 13.8 15 31-45 64-78 (279)
6 d1quua1 a.7.1.1 (A:1-124) alph 24.7 1.1E+02 0.0081 21.7 12.2 25 40-64 8-32 (124)
7 d1ez3a_ a.47.2.1 (A:) Syntaxin 23.3 1.3E+02 0.0094 21.9 8.5 18 101-118 58-75 (124)
8 d1s35a2 a.7.1.1 (A:1169-1273) 21.9 1.2E+02 0.0085 20.9 9.3 11 52-62 39-49 (105)
9 d2efla1 a.238.1.4 (A:1-288) Fo 19.8 2E+02 0.015 22.8 16.8 18 31-48 73-90 (288)
10 d1cxzb_ a.2.6.1 (B:) Protein k 19.6 1.5E+02 0.011 21.2 7.0 65 80-144 17-81 (86)
No 1
>d2fzta1 a.46.3.1 (A:1-78) Hypothetical protein TM0693 {Thermotoga maritima [TaxId: 2336]}
Probab=53.27 E-value=33 Score=24.11 Aligned_cols=27 Identities=15% Similarity=0.140 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchh
Q 018202 101 KVEKEDAKNQEERLSMEVRSLLVAGTA 127 (359)
Q Consensus 101 r~~~~~~~~rre~L~~~ir~l~~~~~~ 127 (359)
+...+-+++++..|...+.-+..+-++
T Consensus 49 ~kR~e~i~k~~~~L~q~~~~ir~~~~~ 75 (78)
T d2fzta1 49 RKRLEIIEKRKTALFQEINVIREARSS 75 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344477788888888777555544333
No 2
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=48.23 E-value=46 Score=24.29 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=20.5
Q ss_pred hHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHH
Q 018202 34 YDQELARLWSLSSALSQADDKKQTLQQKLQSLIQ 67 (359)
Q Consensus 34 ~~~~l~rL~~L~~~iq~a~~~~~~L~~qI~~~le 67 (359)
++..++++..|..-++.+...+..|+.++++.=-
T Consensus 3 lqe~~~~~q~lq~el~~~~~q~~~le~q~~E~~~ 36 (107)
T d1fxka_ 3 VQHQLAQFQQLQQQAQAISVQKQTVEMQINETQK 36 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666666666666666666666554433
No 3
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=45.70 E-value=55 Score=24.44 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 018202 102 VEKEDAKNQEERLSMEVRSL 121 (359)
Q Consensus 102 ~~~~~~~~rre~L~~~ir~l 121 (359)
.+.+-+++|.+.|...+..+
T Consensus 88 eA~~~l~~ri~~l~~~~~~l 107 (133)
T d1fxkc_ 88 DAMESIKSQKNELESTLQKM 107 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555444433
No 4
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=33.67 E-value=80 Score=22.84 Aligned_cols=25 Identities=12% Similarity=0.177 Sum_probs=14.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh
Q 018202 100 SKVEKEDAKNQEERLSMEVRSLLVA 124 (359)
Q Consensus 100 ~r~~~~~~~~rre~L~~~ir~l~~~ 124 (359)
...+..++.++.+.|...|.++...
T Consensus 63 ~~e~~~~l~~~~e~l~~~i~~l~~q 87 (107)
T d1fxka_ 63 KDELTEELQEKLETLQLREKTIERQ 87 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666666666554443
No 5
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.89 E-value=1.4e+02 Score=23.86 Aligned_cols=15 Identities=13% Similarity=0.056 Sum_probs=8.5
Q ss_pred hhhhHHHHHHHhcHH
Q 018202 31 WEDYDQELARLWSLS 45 (359)
Q Consensus 31 ~~~~~~~l~rL~~L~ 45 (359)
|..+..++...+..-
T Consensus 64 ~~~~~~~~~~~a~~~ 78 (279)
T d2efka1 64 FVQILQEVNDFAGQR 78 (279)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 777776555544433
No 6
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.70 E-value=1.1e+02 Score=21.66 Aligned_cols=25 Identities=20% Similarity=0.071 Sum_probs=12.4
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHH
Q 018202 40 RLWSLSSALSQADDKKQTLQQKLQS 64 (359)
Q Consensus 40 rL~~L~~~iq~a~~~~~~L~~qI~~ 64 (359)
|+-.|+...+.=..+.+.+..=|.+
T Consensus 8 R~~~l~~~~q~F~~~~~~l~~Wl~~ 32 (124)
T d1quua1 8 RLERLEHLAEKFRQKASTHETWAYG 32 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555444444444444433
No 7
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.32 E-value=1.3e+02 Score=21.90 Aligned_cols=18 Identities=6% Similarity=0.207 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018202 101 KVEKEDAKNQEERLSMEV 118 (359)
Q Consensus 101 r~~~~~~~~rre~L~~~i 118 (359)
+..-..+..+.+.|...+
T Consensus 58 ~~~a~~ik~~Lk~l~~~~ 75 (124)
T d1ez3a_ 58 KKTANKVRSKLKSIEQSI 75 (124)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333344444444444433
No 8
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.93 E-value=1.2e+02 Score=20.87 Aligned_cols=11 Identities=9% Similarity=-0.003 Sum_probs=4.1
Q ss_pred HHHHHHHHHHH
Q 018202 52 DDKKQTLQQKL 62 (359)
Q Consensus 52 ~~~~~~L~~qI 62 (359)
..+.+.|+..|
T Consensus 39 ~k~h~~l~~~l 49 (105)
T d1s35a2 39 IRKFEDFLGSM 49 (105)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 9
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.82 E-value=2e+02 Score=22.83 Aligned_cols=18 Identities=6% Similarity=0.014 Sum_probs=9.2
Q ss_pred hhhhHHHHHHHhcHHHHH
Q 018202 31 WEDYDQELARLWSLSSAL 48 (359)
Q Consensus 31 ~~~~~~~l~rL~~L~~~i 48 (359)
|..+..+...++..-..+
T Consensus 73 ~~~~~~~~~~~a~~h~~~ 90 (288)
T d2efla1 73 FISNLNEMNDYAGQHEVI 90 (288)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 776665554444433333
No 10
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.62 E-value=1.5e+02 Score=21.17 Aligned_cols=65 Identities=22% Similarity=0.139 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHhHHhHHHhhc
Q 018202 80 EEMRERLEARRLLMEKMSMRSKVEKEDAKNQEERLSMEVRSLLVAGTALSVARKRLQESNRLLAG 144 (359)
Q Consensus 80 ~~~~~rl~~~~~~~~~~~~~~r~~~~~~~~rre~L~~~ir~l~~~~~~l~~a~~~Lqe~~~~L~~ 144 (359)
+..+.+++.++..+.....+.-+.++.++.=++.-....+.+......|...-++|++.+..|..
T Consensus 17 ~~~q~~le~~r~~lr~eI~KELKIKeGAENL~~attd~kk~~~~V~~eL~~sN~kL~~L~~eL~e 81 (86)
T d1cxzb_ 17 PGVQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQE 81 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Done!