BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018205
(359 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 350 bits (899), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 237/356 (66%), Gaps = 3/356 (0%)
Query: 4 IQNEGAKEMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPITLPQLVSALEIN 63
I N E+F+AQA L+K +Y +V S SLK ++E++IP +IH HG+PITL LVS L+I
Sbjct: 5 INNRKPSEIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIP 64
Query: 64 PTKADGLFKLMRLLVHTGFFSTANVQSXXXXXXXXXXLTLTSKLFLKDKPYCLSPVVLTL 123
TK D + +LMR L H GFF Q LT+ S+L +K CL+P+V +
Sbjct: 65 STKVDNVQRLMRYLAHNGFFEIITNQELENEEEAYA-LTVASELLVKGTELCLAPMVECV 123
Query: 124 TDQVFVNPCHFLSRWFRDNELSAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANL 183
D H L +W + +L+ + N G W+++ KNP++N++YN A+ASDS++ NL
Sbjct: 124 LDPTLSTSFHNLKKWVYEEDLTLF-AVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINL 182
Query: 184 IVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIA 243
+KDC +F+GL S+VDVGGG G+ +II E FP + C V D P VV + ++NL ++
Sbjct: 183 AMKDCNLVFEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVG 242
Query: 244 GDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKED 303
GDMF S+P ADA KA+ H + D+DC+KILK+C+EA+ S G RGKVI+ID+VINEKK++
Sbjct: 243 GDMFISVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDE 302
Query: 304 AQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIEVYP 359
QLT+ KLL + + + V G ER E+EW+KLF++AGF +KI+P G+ SLIE+YP
Sbjct: 303 NQLTQIKLLMN-VTISCVNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP 357
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 340 bits (871), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 235/356 (66%), Gaps = 8/356 (2%)
Query: 4 IQNEGAKEMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPITLPQLVSALEIN 63
I E+F+AQA L+K IY ++ S SLK AVE++IP +I HG+PI+L LVS L++
Sbjct: 5 INGRKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVP 64
Query: 64 PTKADGLFKLMRLLVHTGFFSTANVQSXXXXXXXXXXLTLTSKLFLKDKPYCLSPVVLTL 123
+K + +LMR L H GFF + LT+ S+L ++ CL+P+V +
Sbjct: 65 SSKIGNVRRLMRYLAHNGFFEIITKEEESYA------LTVASELLVRGSDLCLAPMVECV 118
Query: 124 TDQVFVNPCHFLSRWFRDNELSAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANL 183
D H L +W + +L+ + G+ FWD++ KNP++N+ +N AMASDS+L NL
Sbjct: 119 LDPTLSGSYHELKKWIYEEDLTLF-GVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINL 177
Query: 184 IVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIA 243
++DC +F GL S+VDVGGGTG+ A+II E FP +KC V D P VV + ++NL ++
Sbjct: 178 ALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVG 237
Query: 244 GDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKED 303
GDMF SIP ADA K I H + D+DCL+ILK+C+EA+ + G RGKV IID+VI++KK++
Sbjct: 238 GDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDE 297
Query: 304 AQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIEVYP 359
Q+T+ KLL D + M + G ER E+EW+KLF++AGF H+KI+P+ G SLIE+YP
Sbjct: 298 NQVTQIKLLMD-VNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 327 bits (838), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 228/356 (64%), Gaps = 8/356 (2%)
Query: 4 IQNEGAKEMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPITLPQLVSALEIN 63
I E+F+AQA L+K IY ++ S SLK AVE +IP +I HG+PI+L LVS L++
Sbjct: 5 INGRKPSEIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVP 64
Query: 64 PTKADGLFKLMRLLVHTGFFSTANVQSXXXXXXXXXXLTLTSKLFLKDKPYCLSPVVLTL 123
+K + +L R L H GFF + LT+ S+L ++ CL+P V +
Sbjct: 65 SSKIGNVRRLXRYLAHNGFFEIITKEEESYA------LTVASELLVRGSDLCLAPXVECV 118
Query: 124 TDQVFVNPCHFLSRWFRDNELSAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANL 183
D H L +W + +L+ + G+ FWD++ KNP++N+ +N A ASDS+L NL
Sbjct: 119 LDPTLSGSYHELKKWIYEEDLTLF-GVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLINL 177
Query: 184 IVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIA 243
++DC +F GL S+VDVGGGTG+ A+II E FP +KC V D P VV + ++NL ++
Sbjct: 178 ALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVG 237
Query: 244 GDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKED 303
GD F SIP ADA K I H + D+DCL+ILK+C+EA+ + G RGKV IID VI++KK++
Sbjct: 238 GDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDE 297
Query: 304 AQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIEVYP 359
Q+T+ KLL D+ + G ER E+EW+KLF++AGF H+KI+P+ G SLIE+YP
Sbjct: 298 NQVTQIKLLXDV-NXACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 308 bits (789), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/354 (46%), Positives = 231/354 (65%), Gaps = 6/354 (1%)
Query: 11 EMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPITLPQLVSALEINPTKADGL 70
E++ AQ HL+K +YN+VSS +LK A+EL I + IH HG+P+TL +L S+L+++P+K + L
Sbjct: 5 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 64
Query: 71 FKLMRLLVHTGFFSTANVQSXXXXXXXXXXLTLT--SKLFLKDKPYCLSPVVLTLTDQVF 128
+ +RLL H GFF+ V+ +LT SKL + KP CLS +V
Sbjct: 65 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 124
Query: 129 VNPCHFLSRWF-RDNELSAYETANDGTVFWDYMAKNPDFN--SIYNQAMASDSQLANLIV 185
++ +WF D E + +E A G FWD++ K+ + + S++ AMASDS++ L++
Sbjct: 125 LDMWSSSKKWFNEDKEQTLFECAT-GESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVL 183
Query: 186 KDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGD 245
++ + +F+GL SLVDVGGGTG ++I E FP +KCTV D P VV + +NL F+ GD
Sbjct: 184 QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 243
Query: 246 MFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQ 305
MF+SIP ADA K + H + DE LKILK +EAI+ +G GKVIIIDI I+E +D
Sbjct: 244 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 303
Query: 306 LTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIEVYP 359
LTE +L YD++M+ G ERT++EWEKL DAGFS +KITP+ G KSLIEVYP
Sbjct: 304 LTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 357
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 308 bits (789), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/354 (46%), Positives = 231/354 (65%), Gaps = 6/354 (1%)
Query: 11 EMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPITLPQLVSALEINPTKADGL 70
E++ AQ HL+K +YN+VSS +LK A+EL I + IH HG+P+TL +L S+L+++P+K + L
Sbjct: 6 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 65
Query: 71 FKLMRLLVHTGFFSTANVQSXXXXXXXXXXLTLT--SKLFLKDKPYCLSPVVLTLTDQVF 128
+ +RLL H GFF+ V+ +LT SKL + KP CLS +V
Sbjct: 66 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 125
Query: 129 VNPCHFLSRWF-RDNELSAYETANDGTVFWDYMAKNPDFN--SIYNQAMASDSQLANLIV 185
++ +WF D E + +E A G FWD++ K+ + + S++ AMASDS++ L++
Sbjct: 126 LDMWSSSKKWFNEDKEQTLFECAT-GESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVL 184
Query: 186 KDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGD 245
++ + +F+GL SLVDVGGGTG ++I E FP +KCTV D P VV + +NL F+ GD
Sbjct: 185 QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 244
Query: 246 MFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQ 305
MF+SIP ADA K + H + DE LKILK +EAI+ +G GKVIIIDI I+E +D
Sbjct: 245 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 304
Query: 306 LTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIEVYP 359
LTE +L YD++M+ G ERT++EWEKL DAGFS +KITP+ G KSLIEVYP
Sbjct: 305 LTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 308 bits (788), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/354 (46%), Positives = 231/354 (65%), Gaps = 6/354 (1%)
Query: 11 EMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPITLPQLVSALEINPTKADGL 70
E++ AQ HL+K +YN+VSS +LK A+EL I + IH HG+P+TL +L S+L+++P+K + L
Sbjct: 2 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 61
Query: 71 FKLMRLLVHTGFFSTANVQSXXXXXXXXXXLTLT--SKLFLKDKPYCLSPVVLTLTDQVF 128
+ +RLL H GFF+ V+ +LT SKL + KP CLS +V
Sbjct: 62 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 121
Query: 129 VNPCHFLSRWF-RDNELSAYETANDGTVFWDYMAKNPDFN--SIYNQAMASDSQLANLIV 185
++ +WF D E + +E A G FWD++ K+ + + S++ AMASDS++ L++
Sbjct: 122 LDMWSSSKKWFNEDKEQTLFECAT-GESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVL 180
Query: 186 KDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGD 245
++ + +F+GL SLVDVGGGTG ++I E FP +KCTV D P VV + +NL F+ GD
Sbjct: 181 QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 240
Query: 246 MFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQ 305
MF+SIP ADA K + H + DE LKILK +EAI+ +G GKVIIIDI I+E +D
Sbjct: 241 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 300
Query: 306 LTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIEVYP 359
LTE +L YD++M+ G ERT++EWEKL DAGFS +KITP+ G KSLIEVYP
Sbjct: 301 LTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 354
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 157/322 (48%), Gaps = 16/322 (4%)
Query: 32 LKCAVELDIPEVIHKHGRPITLPQLVSALEINPTKADG---LFKLMRLLV-HTGFFSTAN 87
LK A+ELD+ E+I K G + + A ++ T D L +++RLL + +
Sbjct: 36 LKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVR 95
Query: 88 VQSXXXXXXXXXXLTLTSKLFLKDKPYCLSPVVLTLTDQVFVNPCHFLSRWFRDNEL--- 144
Q T+ L + +S + L D+V + + L D +
Sbjct: 96 TQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFN 155
Query: 145 SAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGG 204
AY G ++Y +P FN ++N+ M+ S + + + F+GL SLVDVGGG
Sbjct: 156 KAY-----GMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGG 210
Query: 205 TGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFHA 264
TG+ I +P IK DLPHV+ P ++ + GDMF SIP ADA F K I H
Sbjct: 211 TGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHD 270
Query: 265 FVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMV-AVRG 323
+ DE CLK LK C EA+ D GKVI+ + ++ + + T+ + D++M+ G
Sbjct: 271 WSDEHCLKFLKNCYEALP---DNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGG 327
Query: 324 SERTEKEWEKLFLDAGFSHFKI 345
ERT+KE+E L AGF FK+
Sbjct: 328 KERTQKEFEDLAKGAGFQGFKV 349
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 166/342 (48%), Gaps = 17/342 (4%)
Query: 14 EAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRP---ITLPQLVSAL-EINPTKADG 69
EA ++ V +LK A+ELD+ E++ K P I+ ++ + L NP
Sbjct: 20 EANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVM 79
Query: 70 LFKLMRLLVHTGFFSTANVQSXXXXXXXXXXLTLTSKLFLKDK-PYCLSPVVLTLTDQVF 128
L +++RLL + + L K K++ L+P +L TD+V
Sbjct: 80 LDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVL 139
Query: 129 VNPCHFLSRWFRDNEL---SAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIV 185
+ P +L + + AY G +DY + N ++N+ M+S+S + +
Sbjct: 140 LEPWFYLKDAILEGGIPFNKAY-----GMNIFDYHGTDHRINKVFNKGMSSNSTITMKKI 194
Query: 186 KDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGD 245
+ F+GL ++VDVGGGTG+ A +I +P I DLPHV+ P ++ + GD
Sbjct: 195 LEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGD 254
Query: 246 MFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQ 305
MF +P DA F K I H + DE CLK+LK C A+ D GKVI+ + ++ + +
Sbjct: 255 MFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALP---DHGKVIVAEYILPPSPDPSI 311
Query: 306 LTEAKLLYDMLMMV-AVRGSERTEKEWEKLFLDAGFSHFKIT 346
T+ + D LM+ G ERTEKE++ L + +GF FK+
Sbjct: 312 ATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVA 353
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 27/336 (8%)
Query: 25 NYVSSTSLKCAVELDIPEVIHKHGRP---ITLPQLVSALEINPTKAD---GLFKLMRLLV 78
N V L A++L++ E+I K P ++ ++ S L + +D L +++RLL
Sbjct: 34 NLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLA 93
Query: 79 HTGFFSTANVQSXXXXXXXXXXLTLTSKLFLKDKP---------YCLSPVVLTLTDQVFV 129
++ L++ K + D+ + P +L QV++
Sbjct: 94 SYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALL----QVWM 149
Query: 130 NPCHFLSRWFRDNELSAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQ 189
N D ++ ++ + G +++M K+ N I+N++M + +
Sbjct: 150 N----FKEAVVDEDIDLFKNVH-GVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIY 204
Query: 190 PIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQS 249
F+G+ +LVDVGGG+G +I +P IK DLP V+ P ++ + GDMF S
Sbjct: 205 TGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFAS 264
Query: 250 IPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEA 309
+P DA KA+ H + DE C++ L C +A++ GKVII++ ++ E+ ++ ++
Sbjct: 265 VPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSP---NGKVIIVEFILPEEPNTSEESKL 321
Query: 310 KLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKI 345
D LM + V G ERTEK++EKL +GFS F++
Sbjct: 322 VSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQV 357
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 16/334 (4%)
Query: 31 SLKCAVELDIPEVIHKHGRPITLPQLVSA---LEINPTKADGLFKLMRLLVHTGFFSTAN 87
+LK A+EL + E++ G P V+A NP D + +++RLL +
Sbjct: 36 TLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLV 95
Query: 88 VQSXXXXXXXXXXLTLTSKLFLKDK-PYCLSPVVLTLTDQVFVNPCHFLSRWFRDNEL-- 144
+ K ++ ++ + L D+V + ++L D +
Sbjct: 96 EEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPF 155
Query: 145 -SAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGG 203
AY G ++Y +P FN ++N+ M + S + + + F+GLG+LVDVGG
Sbjct: 156 NKAY-----GMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGG 210
Query: 204 GTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFH 263
G G+ I+ +P IK DLPHV+ + P + + GDMF+ +P D K I H
Sbjct: 211 GVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILH 270
Query: 264 AFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRG 323
+ D+ C +LK C +A+ + GKV+++ ++ E ++ DM+M+ G
Sbjct: 271 DWSDQHCATLLKNCYDALPA---HGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPG 327
Query: 324 S-ERTEKEWEKLFLDAGFSHFKITPVYGIKSLIE 356
ER E+E++ L AGF+ K T +Y IE
Sbjct: 328 GRERYEREFQALARGAGFTGVKSTYIYANAWAIE 361
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
Query: 153 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARII 212
G +++ K+ N I+N++ + F+G+ +LVDVGGG+G +I
Sbjct: 168 GVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTGFEGISTLVDVGGGSGRNLELI 227
Query: 213 SEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLK 272
+P IK DLP V+ P ++ + GD F S+P DA KA+ H + DE C++
Sbjct: 228 ISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIE 287
Query: 273 ILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGSERTEKEWE 332
L C +A++ GKVII++ ++ E+ ++ ++ D L + V G ERTEK++E
Sbjct: 288 FLSNCHKALSP---NGKVIIVEFILPEEPNTSEESKLVSTLDNLXFITVGGRERTEKQYE 344
Query: 333 KLFLDAGFSHFKI 345
KL +GFS F++
Sbjct: 345 KLSKLSGFSKFQV 357
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 18/262 (6%)
Query: 101 LTLTSKLFLKDKPYCLSPVVLTLTDQVFVNPCHFLSRWFRDNELSAYETANDGTVFWDYM 160
LT D P +L TD F H ++ E A+ G+ Y
Sbjct: 94 LTDKGAALRSDSPVPARAGILXFTDTXFWTXSHRVASAL-GPERPAFADIF-GSSLDAYF 151
Query: 161 AKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIK 220
+ + ++Y + + S +LI+ F G++ DVGGG G F + PG++
Sbjct: 152 DGDAEVEALYYEGXETVSAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGLQ 210
Query: 221 CTVLDLPHVVPK----VPD-TDNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILK 275
+LD VV + PD K + GD + +P AD K I H + DED ++IL
Sbjct: 211 GVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILT 270
Query: 276 RCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGSERTEKEWEKLF 335
CR + G+V++ID V+ E + Q E D + A G ERT E E LF
Sbjct: 271 NCRRVXPA---HGRVLVIDAVVPEGNDAHQSKEX----DFXXLAARTGQERTAAELEPLF 323
Query: 336 LDAGFSHFKITPVYGIKSLIEV 357
AG ++ V G S+ +
Sbjct: 324 TAAG---LRLDRVVGTSSVXSI 342
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 161/354 (45%), Gaps = 51/354 (14%)
Query: 5 QNEGAKEMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPIT-LPQLVSALEIN 63
+N G A+ + I+ + ++ AVEL +PE++ + R T L + A E
Sbjct: 28 ENPGTAARAAAEETVNDILQGAWKARAIHVAVELGVPELLQEGPRTATALAEATGAHEQT 87
Query: 64 PTKADGLFKLMRL---LVHTGFFSTANVQSXXXXXXXXXXLTLTSKLFLKDKPYCLSPVV 120
+ L + + L H F+ + S + L D SPV
Sbjct: 88 LRRLLRLLATVGVFDDLGHDDLFAQNAL----------------SAVLLPDP---ASPVA 128
Query: 121 LTLTDQVF-VNPCHF-----LSRWFRDNELSAYETANDGTVFWDYMAKNPDFNSIYNQAM 174
TD F P H+ L+ R E S ++ AN GT FW ++P ++N+A
Sbjct: 129 ---TDARFQAAPWHWRAWEQLTHSVRTGEAS-FDVAN-GTSFWQLTHEDPKARELFNRAX 183
Query: 175 ASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVP 234
S S V F G + VD+GGG GS + +AFPG++ T+L+ P V +
Sbjct: 184 GSVSLTEAGQVAAAYD-FSGAATAVDIGGGRGSLXAAVLDAFPGLRGTLLERPPVAEEAR 242
Query: 235 D-------TDNLKFIAGDMFQSIP-PADAFFFKAIFHAFVDEDCLKILKRCREAIASRGD 286
+ D + + GD F++IP AD + K + H + D+D ++IL+R A A + D
Sbjct: 243 ELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRI--ATAXKPD 300
Query: 287 RGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGF 340
++++ID +I+E+ + L D+L++V V G+ER+E E+ L +G
Sbjct: 301 -SRLLVIDNLIDERP-----AASTLFVDLLLLVLVGGAERSESEFAALLEKSGL 348
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 198 LVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVP------DTDNLKFIAGDMFQS-I 250
+ D+GGG G+ A+ +PG K TV D+P VV + + + F GD F+ +
Sbjct: 183 MCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242
Query: 251 PPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAK 310
P AD + + H + D C +L+R G +++I+ +++E + LT+
Sbjct: 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGG---ILVIESLLDEDRRGPLLTQ-- 297
Query: 311 LLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLI 355
LY + M+V G ERT + L AGF F+ I I
Sbjct: 298 -LYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAI 341
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 153 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLG-SLVDVGGGTGSFARI 211
G F+ Y+ + PD + AM + +NL + + G S VDVGGG+G +
Sbjct: 129 GEDFYSYLKRCPDAGRRFLLAM----KASNLAFHEIPRLLDFRGRSFVDVGGGSGELTKA 184
Query: 212 ISEAFPGIKCTVLDLPHVVPKVPDT-------DNLKFIAGDMFQSIPP-ADAFFFKAIFH 263
I +A P + +LD + D + + + GDM Q +P D + I
Sbjct: 185 ILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIG 244
Query: 264 AFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRG 323
+ L++L CREA+A GD G+V++I+ I+ ++ + +L+D+ + +A G
Sbjct: 245 DLDEAASLRLLGNCREAMA--GD-GRVVVIERTISA----SEPSPMSVLWDVHLFMACAG 297
Query: 324 SERTEKEWEKLFLDAGFSHFKI 345
RT +E L GF+ +I
Sbjct: 298 RHRTTEEVVDLLGRGGFAVERI 319
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 153 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARII 212
G F++ +A PD + ++ +A D +A + + ++DVGGG G FA I
Sbjct: 143 GKPFYEDLAGRPDLRASFDSLLACDQDVA-FDAPAAAYDWTNVRHVLDVGGGKGGFAAAI 201
Query: 213 SEAFPGIKCTVLDLPHVVPKVPD-------TDNLKFIAGDMFQSIP-PADAFFFKAIFHA 264
+ P + TVL++ V +D + + GD F+ +P ADA +
Sbjct: 202 ARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLN 261
Query: 265 FVDEDCLKILKRCREAIASRGDRGKVIIIDI-VINEKKEDAQLTEAKLLYDMLMMVAVRG 323
+ D D ++IL RC EA+ G+++I + ++E + Q TE D+ M+V + G
Sbjct: 262 WPDHDAVRILTRCAEALEP---GGRILIHERDDLHENSFNEQFTE----LDLRMLVFLGG 314
Query: 324 SERTEKEWEKLFLDAGF 340
+ RT ++W+ L AG
Sbjct: 315 ALRTREKWDGLAASAGL 331
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
Query: 167 NSIYNQAMASDSQLA-NLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLD 225
N + + S+++ A L++++ + G+ ++DVGGG G + + + FP + T+L+
Sbjct: 164 NLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILN 221
Query: 226 LPHVVPKVPDT-------DNLKFIAGDMF-QSIPPADAFFFKAIFHAFVDEDCLKILKRC 277
LP + V + D ++ IA D++ +S P ADA F I ++ +E I+ C
Sbjct: 222 LPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYS-ANEQLSTIM--C 278
Query: 278 REAIASRGDRGKVIIIDIVINE 299
++A + G+++I+D+VI++
Sbjct: 279 KKAFDAMRSGGRLLILDMVIDD 300
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 14/197 (7%)
Query: 153 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARII 212
G FW+ ++ + ++ M+ D LA D + + ++DVGGG G I
Sbjct: 142 GRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGGMLAAI 200
Query: 213 SEAFPGIKCTVLDLPHVVPKVPD-------TDNLKFIAGDMFQSIP-PADAFFFKAIFHA 264
+ P ++ T+++L + D + GD F+ +P AD +
Sbjct: 201 ALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLN 260
Query: 265 FVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGS 324
+ DED L IL+ C A+ G+++++D + + D L D+ M+ + G
Sbjct: 261 WSDEDALTILRGCVRALEP---GGRLLVLDRA--DVEGDGADRFFSTLLDLRMLTFMGGR 315
Query: 325 ERTEKEWEKLFLDAGFS 341
RT E L AG +
Sbjct: 316 VRTRDEVVDLAGSAGLA 332
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 153 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARII 212
GT FW+ + +P ++ ++ M+ +L + + + LG +VDVGGG+G +
Sbjct: 129 GTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIA-AKYDWAALGHVVDVGGGSGGLLSAL 187
Query: 213 SEAFPGIKCTVLDLPHVVP----KVPDT---DNLKFIAGDMFQSIPP-ADAFFFKAIFHA 264
A + TVLDL + DT + + G F +P A + A+ H
Sbjct: 188 LTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHD 247
Query: 265 FVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGS 324
+ D + IL+RC EA G G V++I+ V ++ + D+ M+ G
Sbjct: 248 WDDLSAVAILRRCAEAA---GSGGVVLVIEAVAGDEHAGTGM-------DLRMLTYFGGK 297
Query: 325 ERTEKEWEKLFLDAGFSHFKITPV 348
ER+ E +L AG + P+
Sbjct: 298 ERSLAELGELAAQAGLAVRAAHPI 321
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 262 FHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAV 321
H F C ++L++ + A+A G KVI+ D + N + +A + +
Sbjct: 242 LHHFDVATCEQLLRKIKTALAVEG---KVIVFDFIPNSDR--ITPPDAAAFSLVXLATTP 296
Query: 322 RGSERTEKEWEKLFLDAGFSHFKI 345
G T E+E F +AGFSH ++
Sbjct: 297 NGDAYTFAEYESXFSNAGFSHSQL 320
>pdb|3DP7|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
pdb|3DP7|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
Length = 363
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 198 LVDVGGGTGSFARIISEAFPGIKCTVLDLPHVV-------PKVPDTDNLKFIAGDMFQSI 250
L+D+GG TG +A + ++ T++DLP + + ++ + ++
Sbjct: 183 LLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRD 242
Query: 251 PP----ADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKK 301
P DA + F +E+ + IL R ++I G KV I++ + + ++
Sbjct: 243 VPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSI---GKDSKVYIMETLWDRQR 294
>pdb|2FUG|7 Chain 7, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus
pdb|2FUG|H Chain H, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus
pdb|2FUG|Q Chain Q, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus
pdb|2FUG|Z Chain Z, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus
pdb|3I9V|7 Chain 7, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Oxidized, 2 MolASU
pdb|3I9V|H Chain H, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Oxidized, 2 MolASU
pdb|3IAM|7 Chain 7, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Reduced, 2 MolASU, WITH BOUND NADH
pdb|3IAM|H Chain H, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Reduced, 2 MolASU, WITH BOUND NADH
pdb|3IAS|7 Chain 7, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Oxidized, 4 MolASU, RE-Refined To 3.15 Angstrom
Resolution
pdb|3IAS|H Chain H, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Oxidized, 4 MolASU, RE-Refined To 3.15 Angstrom
Resolution
pdb|3IAS|Q Chain Q, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Oxidized, 4 MolASU, RE-Refined To 3.15 Angstrom
Resolution
pdb|3IAS|Z Chain Z, Crystal Structure Of The Hydrophilic Domain Of
Respiratory Complex I From Thermus Thermophilus,
Oxidized, 4 MolASU, RE-Refined To 3.15 Angstrom
Resolution
pdb|3M9S|7 Chain 7, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
pdb|3M9S|J Chain J, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
pdb|2YBB|7 Chain 7, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
pdb|4HEA|7 Chain 7, Crystal Structure Of The Entire Respiratory Complex I
From Thermus Thermophilus
pdb|4HEA|I Chain I, Crystal Structure Of The Entire Respiratory Complex I
From Thermus Thermophilus
Length = 129
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 10 KEMFEAQAHLFKIIYNYVSSTSLKCAVELDIPEVIHKHGRPITLPQLVSALEINPTKADG 69
+E++EA L + Y + ++ E D P+ I++ RP LP + + + +DG
Sbjct: 7 RELYEAWVELLSWMREYAQAKGVRFEKEADFPDFIYRMERPYDLPTTI----MTASLSDG 62
Query: 70 L 70
L
Sbjct: 63 L 63
>pdb|1B65|A Chain A, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
pdb|1B65|B Chain B, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
pdb|1B65|C Chain C, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
pdb|1B65|D Chain D, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
pdb|1B65|E Chain E, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
pdb|1B65|F Chain F, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
Length = 375
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 103 LTSKLFLKDKPYCLSPVVLTLTDQVFVNPCHFLSRWFRDNELSAYET 149
+T +++D Y L PVV+T T + + H RW D S Y+T
Sbjct: 87 MTGTHWIEDGGYFLGPVVITNTHGIGM-AHHATVRWMVDRYASTYQT 132
>pdb|2GQI|A Chain A, Solution Structure Of The Sh3 Domain Of Human Ras Gtpase-
Activating Protein 1
Length = 71
Score = 31.2 bits (69), Expect = 0.90, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Query: 226 LPHVVPKVPDTDNLKFIAGDMF 247
LP+ KVPDTD + F+ GDMF
Sbjct: 14 LPYT--KVPDTDEISFLKGDMF 33
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 153 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARII 212
G FW+ ++ + ++ + D LA D + + ++DVGGG G I
Sbjct: 142 GRPFWEDLSADVALADSFDALXSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGGXLAAI 200
Query: 213 SEAFPGIKCTVLDLPHVVPKVPD-------TDNLKFIAGDMFQSIP-PADAFFFKAIFHA 264
+ P ++ T+++L + D + GD F+ +P AD +
Sbjct: 201 ALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLN 260
Query: 265 FVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGS 324
+ DED L IL+ C A+ G+++++D E D L D+ + G
Sbjct: 261 WSDEDALTILRGCVRALEP---GGRLLVLDRADVEG--DGADRFFSTLLDLRXLTFXGGR 315
Query: 325 ERTEKEWEKLFLDAGFS 341
RT E L AG +
Sbjct: 316 VRTRDEVVDLAGSAGLA 332
>pdb|3DLI|A Chain A, Crystal Structure Of A Sam Dependent Methyltransferase
From Archaeoglobus Fulgidus
pdb|3DLI|B Chain B, Crystal Structure Of A Sam Dependent Methyltransferase
From Archaeoglobus Fulgidus
pdb|3DLI|C Chain C, Crystal Structure Of A Sam Dependent Methyltransferase
From Archaeoglobus Fulgidus
Length = 240
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 165 DFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVL 224
D+ ++ + +L ++ P F+G ++D+G G G F + E GI+ +
Sbjct: 12 DYYFLFEEKFRGSRELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGV 69
Query: 225 DLPHVVPKVPDTDNLKFIAGDMFQSIPPADAF-FFKAIFHAFVD 267
D+ + D +KF G ++ +DA + K++ ++D
Sbjct: 70 DI--------NEDMIKFCEGKF--NVVKSDAIEYLKSLPDKYLD 103
>pdb|4H2B|A Chain A, Human Ecto-5'-Nucleotidase (Cd73): Crystal Form Ii (Open)
In Complex With Baicalin
Length = 547
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 20/121 (16%)
Query: 145 SAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGG 204
S + NDGT+ W+ +A F ++ S L Q G + VGG
Sbjct: 394 SPIDERNDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGG- 452
Query: 205 TGSFARIISEAF--PGIKCTVLDLPHVVPKVPDTDNLK-----------FIA--GDMFQS 249
++ + PG + LD+ +VP D LK F+A GD FQ
Sbjct: 453 ----IHVVYDLSRKPGDRVVKLDVLCTSCRVPSYDPLKMDEVYKVILPNFLANGGDGFQM 508
Query: 250 I 250
I
Sbjct: 509 I 509
>pdb|4H2I|A Chain A, Human Ecto-5'-Nucleotidase (Cd73): Crystal Form Iii
(Closed) In Complex With Ampcp
Length = 532
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 20/121 (16%)
Query: 145 SAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGG 204
S + NDGT+ W+ +A F ++ S L Q G + VGG
Sbjct: 371 SPIDERNDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGG- 429
Query: 205 TGSFARIISEAF--PGIKCTVLDLPHVVPKVPDTDNLK-----------FIA--GDMFQS 249
++ + PG + LD+ +VP D LK F+A GD FQ
Sbjct: 430 ----IHVVYDLSRKPGDRVVKLDVLCTKCRVPSYDPLKMDEVYKVILPNFLANGGDGFQM 485
Query: 250 I 250
I
Sbjct: 486 I 486
>pdb|4DZR|A Chain A, The Crystal Structure Of Protein-(Glutamine-N5)
Methyltransferase (Release Factor-Specific) From
Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius
Dsm 446
Length = 215
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 198 LVDVGGGTGSFARIISEAFPGIKCTVLDL 226
++DVG G+G A I+ A PG+ T +DL
Sbjct: 34 VIDVGTGSGCIAVSIALACPGVSVTAVDL 62
>pdb|4H1Y|P Chain P, Human Ecto-5'-Nucleotidase (Cd73): Crystal Form Ii (Open)
In Complex With Psb11552
Length = 546
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 20/121 (16%)
Query: 145 SAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGG 204
S + NDGT+ W+ +A F ++ S L Q G + VGG
Sbjct: 393 SPIDERNDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGG- 451
Query: 205 TGSFARIISEAF--PGIKCTVLDLPHVVPKVPDTDNLK-----------FIA--GDMFQS 249
++ + PG + LD+ +VP D LK F+A GD FQ
Sbjct: 452 ----IHVVYDLSRKPGDRVVKLDVLCTSCRVPSYDPLKMDEVYKVILPNFLANGGDGFQM 507
Query: 250 I 250
I
Sbjct: 508 I 508
>pdb|4H2F|A Chain A, Human Ecto-5'-Nucleotidase (Cd73): Crystal Form I (Open)
In Complex With Adenosine
pdb|4H2G|A Chain A, Human Ecto-5'-Nucleotidase (Cd73): Crystal Form Ii (Open)
In Complex With Adenosine
Length = 546
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 20/121 (16%)
Query: 145 SAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGG 204
S + NDGT+ W+ +A F ++ S L Q G + VGG
Sbjct: 393 SPIDERNDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGG- 451
Query: 205 TGSFARIISEAF--PGIKCTVLDLPHVVPKVPDTDNLK-----------FIA--GDMFQS 249
++ + PG + LD+ VP D LK F+A GD FQ
Sbjct: 452 ----IHVVYDLSRKPGDRVVKLDVLCTACAVPSYDPLKMDEVYKVILPNFLANGGDGFQM 507
Query: 250 I 250
I
Sbjct: 508 I 508
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,227,214
Number of Sequences: 62578
Number of extensions: 411369
Number of successful extensions: 1034
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 970
Number of HSP's gapped (non-prelim): 34
length of query: 359
length of database: 14,973,337
effective HSP length: 100
effective length of query: 259
effective length of database: 8,715,537
effective search space: 2257324083
effective search space used: 2257324083
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)