Query 018207
Match_columns 359
No_of_seqs 247 out of 2268
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 07:02:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018207.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018207hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02236 choline kinase 100.0 7.5E-61 1.6E-65 449.5 36.6 344 1-344 1-344 (344)
2 PLN02421 phosphotransferase, a 100.0 3.6E-57 7.9E-62 422.7 32.2 316 22-346 1-322 (330)
3 KOG4720 Ethanolamine kinase [L 100.0 1.1E-57 2.4E-62 397.6 26.4 317 17-346 66-389 (391)
4 PTZ00296 choline kinase; Provi 100.0 1.3E-56 2.8E-61 430.3 35.4 329 13-345 83-435 (442)
5 KOG2686 Choline kinase [Cell w 100.0 1.1E-53 2.3E-58 386.3 27.0 325 17-343 21-361 (366)
6 PTZ00384 choline kinase; Provi 100.0 1.9E-51 4.1E-56 388.1 33.8 325 13-341 28-375 (383)
7 cd05156 ChoK_euk Choline Kinas 100.0 3.6E-43 7.8E-48 325.7 26.4 274 40-313 2-302 (302)
8 TIGR02721 ycfN_thiK thiamine k 100.0 4.4E-36 9.5E-41 271.7 24.4 251 42-332 2-253 (256)
9 cd05157 ETNK_euk Ethanolamine 100.0 1.4E-35 3E-40 265.0 23.0 224 39-272 1-235 (235)
10 PF01633 Choline_kinase: Choli 100.0 2.2E-35 4.8E-40 259.5 9.6 202 65-266 2-210 (211)
11 cd05153 HomoserineK_II Homoser 99.9 3.2E-26 6.8E-31 211.6 22.1 259 17-313 2-271 (296)
12 cd05151 ChoK Choline Kinase (C 99.9 5.2E-26 1.1E-30 192.6 19.5 164 40-278 2-167 (170)
13 TIGR02172 Fb_sc_TIGR02172 Fibr 99.9 1.3E-25 2.8E-30 198.8 17.5 197 41-277 6-212 (226)
14 PRK05231 homoserine kinase; Pr 99.9 2.7E-23 5.8E-28 194.1 24.5 242 15-293 8-267 (319)
15 cd05154 ACAD10_11_like Acyl-Co 99.9 8.4E-24 1.8E-28 186.6 19.4 194 40-245 2-220 (223)
16 TIGR00938 thrB_alt homoserine 99.9 4.6E-23 9.9E-28 191.5 24.3 250 13-293 6-267 (307)
17 COG0510 ycfN Thiamine kinase a 99.9 8.9E-24 1.9E-28 191.0 17.4 246 40-343 10-265 (269)
18 cd05150 APH Aminoglycoside 3'- 99.9 1.2E-22 2.6E-27 182.5 21.0 214 41-277 3-226 (244)
19 cd05155 APH_ChoK_like_1 Unchar 99.9 2.3E-22 4.9E-27 179.7 17.8 204 41-276 2-221 (235)
20 PF01636 APH: Phosphotransfera 99.9 6.7E-23 1.5E-27 182.2 10.7 215 40-276 1-228 (239)
21 PLN02876 acyl-CoA dehydrogenas 99.9 1.2E-20 2.7E-25 196.2 26.1 284 17-313 21-336 (822)
22 COG2334 Putative homoserine ki 99.9 1.4E-20 3.1E-25 173.9 23.1 269 8-317 5-296 (331)
23 PRK10271 thiK thiamine kinase; 99.9 3.1E-21 6.6E-26 163.1 16.4 177 110-327 1-177 (188)
24 cd05152 MPH2' Macrolide 2'-Pho 99.9 2.1E-20 4.6E-25 170.3 23.1 223 40-295 15-261 (276)
25 PRK11768 serine/threonine prot 99.9 8.5E-20 1.8E-24 170.6 27.0 287 12-339 9-316 (325)
26 COG3173 Predicted aminoglycosi 99.9 3.7E-20 8E-25 169.3 22.6 249 13-282 7-273 (321)
27 TIGR02906 spore_CotS spore coa 99.9 1.3E-19 2.8E-24 168.7 24.9 234 50-314 10-282 (313)
28 TIGR02904 spore_ysxE spore coa 99.8 8.4E-19 1.8E-23 163.0 23.1 242 41-315 12-292 (309)
29 PRK09550 mtnK methylthioribose 99.8 6.7E-19 1.5E-23 166.6 20.2 224 15-250 8-271 (401)
30 PRK10593 hypothetical protein; 99.8 1.2E-18 2.7E-23 160.5 20.8 234 37-304 15-274 (297)
31 PRK06148 hypothetical protein; 99.8 3.2E-17 7E-22 173.0 26.9 295 10-346 7-329 (1013)
32 PRK06149 hypothetical protein; 99.8 2E-17 4.4E-22 174.4 24.7 298 5-345 4-335 (972)
33 PRK12396 5-methylribose kinase 99.8 5.8E-18 1.3E-22 158.5 18.0 225 15-250 11-275 (409)
34 PLN02756 S-methyl-5-thioribose 99.8 4.6E-17 9.9E-22 153.4 19.9 222 16-248 11-276 (418)
35 PF03881 Fructosamin_kin: Fruc 99.8 2.9E-17 6.4E-22 149.7 15.8 260 18-335 4-286 (288)
36 TIGR01767 MTRK 5-methylthiorib 99.7 4.3E-17 9.4E-22 151.0 14.8 199 43-249 2-239 (370)
37 COG3001 Uncharacterized protei 99.7 1.7E-15 3.8E-20 129.7 17.2 220 37-303 17-264 (286)
38 cd05120 APH_ChoK_like Aminogly 99.6 1E-14 2.2E-19 119.9 14.8 144 41-245 3-152 (155)
39 COG3231 Aph Aminoglycoside pho 99.5 7E-13 1.5E-17 113.2 17.7 210 43-277 25-248 (266)
40 PF07914 DUF1679: Protein of u 99.5 1.3E-12 2.8E-17 125.1 18.9 259 17-295 16-362 (414)
41 PF02958 EcKinase: Ecdysteroid 99.5 1.6E-12 3.5E-17 120.0 15.0 219 46-278 3-284 (294)
42 PRK14879 serine/threonine prot 99.4 5E-12 1.1E-16 110.7 15.6 184 42-294 2-197 (211)
43 TIGR03724 arch_bud32 Kae1-asso 99.4 8.2E-12 1.8E-16 108.4 16.1 164 44-278 2-178 (199)
44 PF04655 APH_6_hur: Aminoglyco 99.4 1.2E-11 2.7E-16 110.5 15.9 234 43-311 9-250 (253)
45 COG3642 Mn2+-dependent serine/ 99.4 1.1E-11 2.5E-16 103.3 13.8 165 44-280 4-181 (204)
46 smart00587 CHK ZnF_C4 abd HLH 99.3 7.6E-12 1.7E-16 108.5 9.5 67 198-277 118-188 (196)
47 COG4857 Predicted kinase [Gene 99.3 5.1E-12 1.1E-16 111.2 8.2 202 35-245 29-271 (408)
48 TIGR02905 spore_yutH spore coa 99.3 3.4E-10 7.3E-15 105.4 20.5 217 65-314 28-282 (313)
49 PRK10359 lipopolysaccharide co 99.2 1.8E-10 3.9E-15 101.3 11.8 138 37-238 32-192 (232)
50 COG3178 Predicted phosphotrans 99.2 2E-10 4.3E-15 102.1 11.2 212 85-319 69-309 (351)
51 PRK01723 3-deoxy-D-manno-octul 99.2 9.1E-10 2E-14 98.4 15.2 170 43-278 38-236 (239)
52 PRK09605 bifunctional UGMP fam 99.1 1.5E-09 3.2E-14 108.5 13.8 166 41-278 338-515 (535)
53 KOG3021 Predicted kinase [Gene 99.0 3.4E-08 7.5E-13 84.2 15.4 190 64-284 34-272 (313)
54 cd05146 RIO3_euk RIO kinase fa 98.9 1.4E-08 3.1E-13 87.3 12.5 98 84-230 74-172 (197)
55 PRK12274 serine/threonine prot 98.9 5E-08 1.1E-12 84.4 14.8 135 41-237 7-147 (218)
56 TIGR02457 TreS_Cterm trehalose 98.9 1.3E-07 2.9E-12 92.8 19.5 193 39-246 168-432 (528)
57 cd05147 RIO1_euk RIO kinase fa 98.9 1.5E-08 3.2E-13 87.4 11.3 134 43-230 4-165 (190)
58 PRK15123 lipopolysaccharide co 98.9 3.8E-08 8.3E-13 89.2 14.4 66 199-277 156-233 (268)
59 cd05145 RIO1_like RIO kinase f 98.9 3.2E-08 6.9E-13 85.3 13.4 138 42-233 3-168 (190)
60 COG0478 RIO-like serine/threon 98.9 2.1E-08 4.6E-13 88.8 11.2 130 43-231 98-251 (304)
61 smart00090 RIO RIO-like kinase 98.9 2.1E-07 4.5E-12 83.1 17.4 140 42-235 34-202 (237)
62 KOG3087 Serine/threonine prote 98.9 5E-08 1.1E-12 81.5 12.2 174 40-277 11-203 (229)
63 PF06293 Kdo: Lipopolysacchari 98.8 3.8E-08 8.2E-13 86.0 11.1 130 84-275 59-206 (206)
64 PF01163 RIO1: RIO1 family; I 98.8 2.7E-08 5.9E-13 85.2 8.4 97 84-231 56-155 (188)
65 cd05119 RIO RIO kinase family, 98.7 1.4E-07 3E-12 80.9 11.4 74 42-120 3-102 (187)
66 PF06176 WaaY: Lipopolysacchar 98.7 5.9E-07 1.3E-11 78.0 14.3 128 40-231 35-183 (229)
67 PRK09902 hypothetical protein; 98.7 4.7E-07 1E-11 78.3 13.6 63 199-277 146-215 (216)
68 cd05144 RIO2_C RIO kinase fami 98.7 3.5E-07 7.6E-12 79.3 12.4 129 42-230 21-173 (198)
69 PRK09188 serine/threonine prot 98.6 4.4E-07 9.6E-12 85.7 11.3 141 41-240 23-170 (365)
70 TIGR01982 UbiB 2-polyprenylphe 98.6 3.3E-07 7.1E-12 89.1 10.6 140 40-234 121-309 (437)
71 COG1718 RIO1 Serine/threonine 98.5 2.6E-06 5.5E-11 75.0 13.1 134 43-230 55-214 (268)
72 COG2187 Uncharacterized protei 98.4 7.9E-06 1.7E-10 72.7 13.3 138 127-281 125-278 (337)
73 PRK04750 ubiB putative ubiquin 98.3 3.2E-06 6.9E-11 83.7 9.9 163 17-235 101-317 (537)
74 COG2112 Predicted Ser/Thr prot 98.3 5.6E-06 1.2E-10 69.1 9.6 73 42-121 28-100 (201)
75 PRK14705 glycogen branching en 98.3 2.2E-05 4.8E-10 83.9 15.8 226 40-279 148-425 (1224)
76 PLN00034 mitogen-activated pro 98.2 9.4E-06 2E-10 76.8 10.6 133 41-231 79-217 (353)
77 COG0661 AarF Predicted unusual 98.2 2.7E-06 5.8E-11 83.6 6.8 162 17-235 107-318 (517)
78 COG3570 StrB Streptomycin 6-ki 98.1 8.9E-06 1.9E-10 69.1 7.6 137 96-244 63-203 (274)
79 cd00180 PKc Catalytic domain o 98.1 2.6E-05 5.7E-10 66.6 10.6 140 44-236 1-147 (215)
80 KOG0605 NDR and related serine 98.1 4.7E-05 1E-09 73.1 11.6 138 40-231 145-290 (550)
81 cd05587 STKc_cPKC Catalytic do 98.0 2.9E-05 6.4E-10 72.5 10.2 137 41-230 5-149 (324)
82 PF00069 Pkinase: Protein kina 98.0 9.1E-06 2E-10 72.8 6.2 137 41-231 4-147 (260)
83 cd05600 STKc_Sid2p_Dbf2p Catal 98.0 2.4E-05 5.2E-10 73.3 9.1 137 41-231 6-150 (333)
84 cd05598 STKc_LATS Catalytic do 98.0 2.6E-05 5.5E-10 74.5 8.8 137 40-230 5-149 (376)
85 cd05068 PTKc_Frk_like Catalyti 98.0 5.7E-05 1.2E-09 67.9 10.2 138 41-231 11-152 (261)
86 KOG2270 Serine/threonine prote 98.0 7.2E-05 1.6E-09 69.4 10.6 164 15-239 128-323 (520)
87 cd05627 STKc_NDR2 Catalytic do 97.9 3.4E-05 7.3E-10 73.2 8.5 137 40-230 5-149 (360)
88 cd06638 STKc_myosinIIIA Cataly 97.9 8.8E-05 1.9E-09 67.6 10.9 142 41-231 23-173 (286)
89 cd05069 PTKc_Yes Catalytic dom 97.9 0.00018 3.9E-09 64.6 12.4 137 42-231 12-151 (260)
90 cd05599 STKc_NDR_like Catalyti 97.9 2.4E-05 5.3E-10 74.2 6.9 136 41-230 6-149 (364)
91 cd06608 STKc_myosinIII_like Ca 97.9 9.4E-05 2E-09 66.7 10.4 142 41-231 11-162 (275)
92 cd05595 STKc_PKB_beta Catalyti 97.9 5.2E-05 1.1E-09 70.8 8.9 134 43-230 2-143 (323)
93 cd06644 STKc_STK10_LOK Catalyt 97.9 0.00011 2.4E-09 67.3 10.9 137 41-230 17-158 (292)
94 cd05592 STKc_nPKC_theta_delta 97.9 5.7E-05 1.2E-09 70.3 8.9 135 43-230 2-144 (316)
95 cd05629 STKc_NDR_like_fungal C 97.9 0.00011 2.4E-09 70.1 11.0 136 41-230 6-149 (377)
96 smart00219 TyrKc Tyrosine kina 97.9 7.7E-05 1.7E-09 66.6 9.2 143 42-232 5-153 (258)
97 cd05591 STKc_nPKC_epsilon Cata 97.9 9.8E-05 2.1E-09 68.8 10.2 135 43-230 2-144 (321)
98 cd05582 STKc_RSK_N N-terminal 97.9 8E-05 1.7E-09 69.3 9.6 139 42-231 2-147 (318)
99 cd08217 STKc_Nek2 Catalytic do 97.8 0.00018 3.9E-09 64.4 11.0 33 199-232 128-160 (265)
100 cd05570 STKc_PKC Catalytic dom 97.8 4.8E-05 1E-09 70.9 7.4 135 43-230 2-144 (318)
101 cd06639 STKc_myosinIIIB Cataly 97.8 0.00026 5.6E-09 64.8 12.1 142 41-231 27-177 (291)
102 cd06649 PKc_MEK2 Catalytic dom 97.8 0.00042 9.2E-09 64.9 13.7 138 40-230 9-152 (331)
103 KOG2268 Serine/threonine prote 97.8 1.8E-05 4E-10 72.1 4.1 125 45-229 101-249 (465)
104 cd05614 STKc_MSK2_N N-terminal 97.8 0.00019 4.1E-09 67.2 11.2 140 41-230 5-153 (332)
105 cd06656 STKc_PAK3 Catalytic do 97.8 6.5E-05 1.4E-09 69.2 7.8 136 40-230 23-163 (297)
106 KOG0581 Mitogen-activated prot 97.8 8.5E-05 1.8E-09 68.3 8.2 144 39-235 82-232 (364)
107 cd05628 STKc_NDR1 Catalytic do 97.8 0.0002 4.2E-09 68.1 11.2 138 40-231 5-150 (363)
108 cd05631 STKc_GRK4 Catalytic do 97.8 0.00021 4.5E-09 65.4 11.0 140 40-231 4-151 (285)
109 cd06655 STKc_PAK2 Catalytic do 97.8 0.00011 2.5E-09 67.6 9.0 137 40-231 23-164 (296)
110 cd05590 STKc_nPKC_eta Catalyti 97.8 0.00012 2.5E-09 68.4 9.1 135 43-230 2-144 (320)
111 cd05621 STKc_ROCK2 Catalytic d 97.8 0.00013 2.8E-09 69.6 9.5 136 40-230 47-190 (370)
112 cd05122 PKc_STE Catalytic doma 97.8 0.00038 8.1E-09 61.6 12.0 139 42-233 6-149 (253)
113 cd05594 STKc_PKB_alpha Catalyt 97.8 0.00036 7.9E-09 65.1 12.3 30 200-230 115-144 (325)
114 cd05583 STKc_MSK_N N-terminal 97.8 9.6E-05 2.1E-09 67.5 8.2 141 41-231 5-154 (288)
115 cd05052 PTKc_Abl Catalytic dom 97.8 0.00018 3.9E-09 64.8 9.8 138 42-231 12-153 (263)
116 cd05626 STKc_LATS2 Catalytic d 97.8 0.00021 4.7E-09 68.3 10.8 137 40-230 5-149 (381)
117 cd05620 STKc_nPKC_delta Cataly 97.8 0.00014 3E-09 67.7 9.3 135 43-230 2-144 (316)
118 cd05589 STKc_PKN Catalytic dom 97.7 0.00013 2.8E-09 68.1 9.0 136 41-230 4-149 (324)
119 cd06621 PKc_MAPKK_Pek1_like Ca 97.7 0.00035 7.5E-09 63.9 11.7 142 40-231 5-154 (287)
120 cd05615 STKc_cPKC_alpha Cataly 97.7 0.00021 4.6E-09 66.7 10.3 137 41-230 5-149 (323)
121 cd05588 STKc_aPKC Catalytic do 97.7 0.00022 4.7E-09 66.8 10.3 135 43-230 2-144 (329)
122 cd05603 STKc_SGK2 Catalytic do 97.7 0.00016 3.4E-09 67.4 9.3 30 201-231 116-145 (321)
123 cd05084 PTKc_Fes Catalytic dom 97.7 0.00023 5.1E-09 63.5 10.1 136 43-231 2-143 (252)
124 cd05596 STKc_ROCK Catalytic do 97.7 0.00022 4.8E-09 68.0 10.4 136 40-230 47-190 (370)
125 PTZ00267 NIMA-related protein 97.7 0.00026 5.7E-09 69.9 11.2 140 42-230 73-217 (478)
126 cd05597 STKc_DMPK_like Catalyt 97.7 0.00035 7.6E-09 65.5 11.5 137 41-230 6-150 (331)
127 cd05608 STKc_GRK1 Catalytic do 97.7 0.00017 3.7E-09 65.7 9.2 136 45-230 2-145 (280)
128 cd05071 PTKc_Src Catalytic dom 97.7 0.00043 9.4E-09 62.3 11.7 137 42-231 12-151 (262)
129 cd05601 STKc_CRIK Catalytic do 97.7 0.00022 4.9E-09 66.6 10.2 137 41-230 6-150 (330)
130 cd05612 STKc_PRKX_like Catalyt 97.7 0.00012 2.6E-09 67.2 8.1 136 41-230 6-149 (291)
131 cd05593 STKc_PKB_gamma Catalyt 97.7 0.00027 5.8E-09 66.2 10.5 135 43-231 2-144 (328)
132 cd05114 PTKc_Tec_Rlk Catalytic 97.7 0.00044 9.6E-09 61.9 11.5 137 41-231 9-149 (256)
133 cd05617 STKc_aPKC_zeta Catalyt 97.7 0.00023 4.9E-09 66.6 9.9 135 43-230 2-144 (327)
134 cd05632 STKc_GRK5 Catalytic do 97.7 0.00044 9.6E-09 63.2 11.6 140 40-230 4-150 (285)
135 cd06625 STKc_MEKK3_like Cataly 97.7 0.00031 6.6E-09 63.0 10.3 136 42-231 8-153 (263)
136 cd05571 STKc_PKB Catalytic dom 97.7 0.00032 7E-09 65.4 10.7 135 43-231 2-144 (323)
137 cd05034 PTKc_Src_like Catalyti 97.7 0.00042 9.1E-09 62.1 11.0 137 42-231 12-152 (261)
138 KOG1235 Predicted unusual prot 97.7 0.00067 1.5E-08 66.9 13.0 43 200-242 320-367 (538)
139 KOG0610 Putative serine/threon 97.7 0.00019 4.2E-09 67.0 8.7 140 41-232 82-229 (459)
140 cd05574 STKc_phototropin_like 97.7 0.00074 1.6E-08 62.6 12.9 141 41-233 6-154 (316)
141 KOG0592 3-phosphoinositide-dep 97.7 0.00024 5.3E-09 68.5 9.6 144 38-234 74-226 (604)
142 cd05070 PTKc_Fyn_Yrk Catalytic 97.7 0.00055 1.2E-08 61.4 11.6 137 42-231 12-151 (260)
143 cd05622 STKc_ROCK1 Catalytic d 97.7 0.00018 3.8E-09 68.7 8.8 136 40-230 47-190 (371)
144 PTZ00263 protein kinase A cata 97.7 0.00038 8.1E-09 65.2 10.9 137 40-230 22-166 (329)
145 cd07848 STKc_CDKL5 Catalytic d 97.7 0.00016 3.4E-09 66.0 8.1 137 41-231 6-149 (287)
146 cd05625 STKc_LATS1 Catalytic d 97.7 0.00037 8E-09 66.7 11.0 137 40-230 5-149 (382)
147 cd05616 STKc_cPKC_beta Catalyt 97.7 0.00031 6.7E-09 65.5 10.2 137 41-230 5-149 (323)
148 cd06917 STKc_NAK1_like Catalyt 97.7 0.00016 3.5E-09 65.6 8.1 136 42-231 7-150 (277)
149 cd05618 STKc_aPKC_iota Catalyt 97.7 0.00032 7E-09 65.7 10.3 135 43-230 2-144 (329)
150 cd05059 PTKc_Tec_like Catalyti 97.7 0.00024 5.2E-09 63.7 9.0 136 42-231 10-149 (256)
151 cd06619 PKc_MKK5 Catalytic dom 97.7 0.00046 9.9E-09 62.8 10.9 132 41-230 6-143 (279)
152 cd06654 STKc_PAK1 Catalytic do 97.7 0.00039 8.4E-09 64.0 10.5 137 40-231 24-165 (296)
153 cd05085 PTKc_Fer Catalytic dom 97.6 0.00046 9.9E-09 61.5 10.6 135 43-231 2-142 (250)
154 cd05038 PTKc_Jak_rpt2 Catalyti 97.6 0.00072 1.6E-08 61.3 12.1 143 42-233 10-160 (284)
155 cd06640 STKc_MST4 Catalytic do 97.6 0.00017 3.6E-09 65.6 7.8 135 41-230 9-149 (277)
156 cd07871 STKc_PCTAIRE3 Catalyti 97.6 0.00047 1E-08 63.1 10.9 137 40-230 9-151 (288)
157 cd05088 PTKc_Tie2 Catalytic do 97.6 0.00029 6.3E-09 65.0 9.6 75 42-120 13-95 (303)
158 cd00192 PTKc Catalytic domain 97.6 0.00026 5.7E-09 63.1 9.0 149 43-233 2-156 (262)
159 cd06650 PKc_MEK1 Catalytic dom 97.6 0.00073 1.6E-08 63.4 12.3 137 41-230 10-152 (333)
160 cd05613 STKc_MSK1_N N-terminal 97.6 0.00066 1.4E-08 62.0 11.8 139 42-230 6-153 (290)
161 cd05585 STKc_YPK1_like Catalyt 97.6 0.00026 5.7E-09 65.7 9.2 133 45-231 2-142 (312)
162 cd05573 STKc_ROCK_NDR_like Cat 97.6 0.00023 5E-09 67.0 8.9 137 41-231 6-150 (350)
163 cd05079 PTKc_Jak1_rpt2 Catalyt 97.6 0.00063 1.4E-08 62.0 11.5 142 41-231 9-158 (284)
164 cd07872 STKc_PCTAIRE2 Catalyti 97.6 0.00065 1.4E-08 62.8 11.7 139 39-231 9-153 (309)
165 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.6 0.0007 1.5E-08 61.6 11.6 142 41-231 9-157 (284)
166 cd05039 PTKc_Csk_like Catalyti 97.6 0.00075 1.6E-08 60.3 11.7 137 42-232 12-152 (256)
167 KOG1187 Serine/threonine prote 97.6 0.00046 9.9E-09 65.5 10.4 143 42-234 81-229 (361)
168 cd05072 PTKc_Lyn Catalytic dom 97.6 0.00072 1.6E-08 60.6 11.4 142 37-231 6-152 (261)
169 cd05066 PTKc_EphR_A Catalytic 97.6 0.00028 6.2E-09 63.6 8.8 140 42-231 10-155 (267)
170 cd06627 STKc_Cdc7_like Catalyt 97.6 0.00093 2E-08 59.3 11.9 138 41-232 5-149 (254)
171 cd05580 STKc_PKA Catalytic dom 97.6 0.00063 1.4E-08 62.2 11.1 137 41-231 6-150 (290)
172 PRK13184 pknD serine/threonine 97.6 0.0015 3.2E-08 68.6 14.8 146 41-231 7-162 (932)
173 cd07869 STKc_PFTAIRE1 Catalyti 97.6 0.00068 1.5E-08 62.5 11.3 137 40-230 9-151 (303)
174 cd05619 STKc_nPKC_theta Cataly 97.6 0.00041 8.9E-09 64.6 9.9 135 43-230 2-144 (316)
175 cd05584 STKc_p70S6K Catalytic 97.6 0.00043 9.3E-09 64.6 10.0 138 42-230 2-148 (323)
176 cd05073 PTKc_Hck Catalytic dom 97.6 0.00097 2.1E-08 59.9 12.0 139 40-230 10-150 (260)
177 cd05578 STKc_Yank1 Catalytic d 97.6 0.00012 2.7E-09 65.5 6.0 138 41-232 5-150 (258)
178 cd07861 STKc_CDK1_euk Catalyti 97.6 0.00035 7.7E-09 63.5 9.0 139 41-231 5-150 (285)
179 PHA03212 serine/threonine kina 97.6 0.0017 3.7E-08 62.4 14.2 131 40-230 96-230 (391)
180 cd05624 STKc_MRCK_beta Catalyt 97.6 0.00073 1.6E-08 63.3 11.4 30 200-230 121-150 (331)
181 cd05082 PTKc_Csk Catalytic dom 97.6 0.0011 2.5E-08 59.2 12.2 137 41-231 11-151 (256)
182 cd08219 STKc_Nek3 Catalytic do 97.5 0.0015 3.3E-08 58.3 12.6 139 41-231 5-149 (255)
183 cd06615 PKc_MEK Catalytic doma 97.5 0.0012 2.6E-08 61.1 12.2 137 41-230 6-148 (308)
184 cd05633 STKc_GRK3 Catalytic do 97.5 0.00055 1.2E-08 62.4 9.8 29 201-230 117-145 (279)
185 cd05067 PTKc_Lck_Blk Catalytic 97.5 0.00069 1.5E-08 60.8 10.3 139 41-232 11-152 (260)
186 cd06613 STKc_MAP4K3_like Catal 97.5 0.0019 4.1E-08 57.8 13.1 138 41-231 8-150 (262)
187 cd07873 STKc_PCTAIRE1 Catalyti 97.5 0.001 2.2E-08 61.2 11.6 137 40-230 10-152 (301)
188 cd06641 STKc_MST3 Catalytic do 97.5 0.00058 1.3E-08 62.0 9.8 136 41-231 9-150 (277)
189 cd05109 PTKc_HER2 Catalytic do 97.5 0.00051 1.1E-08 62.4 9.3 30 201-231 129-158 (279)
190 cd05083 PTKc_Chk Catalytic dom 97.5 0.00042 9E-09 62.0 8.6 136 42-232 12-150 (254)
191 cd05609 STKc_MAST Catalytic do 97.5 0.00095 2.1E-08 61.6 11.2 137 41-231 6-150 (305)
192 PTZ00036 glycogen synthase kin 97.5 0.00099 2.2E-08 65.1 11.8 30 201-230 190-219 (440)
193 cd06606 STKc_MAPKKK Catalytic 97.5 0.00035 7.6E-09 62.0 8.0 141 41-234 5-153 (260)
194 cd06614 STKc_PAK Catalytic dom 97.5 0.00055 1.2E-08 62.4 9.3 137 42-231 25-165 (286)
195 cd06624 STKc_ASK Catalytic dom 97.5 0.00048 1E-08 62.1 8.8 139 42-230 14-157 (268)
196 cd05102 PTKc_VEGFR3 Catalytic 97.5 0.0008 1.7E-08 63.1 10.6 81 41-121 12-100 (338)
197 cd06612 STKc_MST1_2 Catalytic 97.5 0.00057 1.2E-08 60.9 9.2 136 42-231 9-148 (256)
198 cd08220 STKc_Nek8 Catalytic do 97.5 0.00083 1.8E-08 59.9 10.1 140 41-231 5-151 (256)
199 PTZ00426 cAMP-dependent protei 97.5 0.00076 1.7E-08 63.5 10.3 138 40-230 34-179 (340)
200 cd05623 STKc_MRCK_alpha Cataly 97.5 0.001 2.2E-08 62.3 11.2 29 201-230 122-150 (332)
201 cd06623 PKc_MAPKK_plant_like C 97.5 0.0016 3.5E-08 58.2 12.1 137 42-231 7-149 (264)
202 cd07876 STKc_JNK2 Catalytic do 97.5 0.00047 1E-08 65.3 8.8 30 201-231 143-172 (359)
203 cd05041 PTKc_Fes_like Catalyti 97.5 0.0011 2.4E-08 59.0 10.7 135 43-231 2-142 (251)
204 KOG0608 Warts/lats-like serine 97.5 0.00026 5.6E-09 69.6 6.9 32 198-230 746-777 (1034)
205 cd05106 PTKc_CSF-1R Catalytic 97.5 0.0008 1.7E-08 64.3 10.3 80 41-120 43-129 (374)
206 cd05049 PTKc_Trk Catalytic dom 97.5 0.0007 1.5E-08 61.3 9.5 153 42-230 11-170 (280)
207 cd05607 STKc_GRK7 Catalytic do 97.5 0.0013 2.7E-08 59.9 11.1 29 201-230 115-143 (277)
208 cd06643 STKc_SLK Catalytic dom 97.5 0.0009 2E-08 60.9 10.1 137 42-231 11-152 (282)
209 cd07846 STKc_CDKL2_3 Catalytic 97.5 0.00033 7.1E-09 63.7 7.2 137 41-231 6-149 (286)
210 cd07863 STKc_CDK4 Catalytic do 97.5 0.0016 3.4E-08 59.3 11.7 30 201-231 128-157 (288)
211 cd05604 STKc_SGK3 Catalytic do 97.5 0.00079 1.7E-08 62.8 9.8 30 201-231 116-145 (325)
212 cd08215 STKc_Nek Catalytic dom 97.5 0.0016 3.5E-08 57.8 11.5 141 41-231 5-152 (258)
213 cd05093 PTKc_TrkB Catalytic do 97.5 0.00067 1.5E-08 62.0 9.1 30 200-230 139-168 (288)
214 PHA03211 serine/threonine kina 97.4 0.0015 3.2E-08 64.3 11.9 132 41-231 174-309 (461)
215 cd07837 STKc_CdkB_plant Cataly 97.4 0.0022 4.8E-08 58.6 12.5 142 41-230 6-159 (295)
216 cd05104 PTKc_Kit Catalytic dom 97.4 0.00095 2.1E-08 63.8 10.3 79 42-120 41-126 (375)
217 cd05611 STKc_Rim15_like Cataly 97.4 0.0011 2.3E-08 59.4 10.2 137 42-231 2-146 (260)
218 cd08529 STKc_FA2-like Catalyti 97.4 0.0021 4.6E-08 57.2 11.9 138 42-231 6-150 (256)
219 cd05572 STKc_cGK_PKG Catalytic 97.4 0.00052 1.1E-08 61.6 8.0 31 200-231 112-142 (262)
220 cd06617 PKc_MKK3_6 Catalytic d 97.4 0.0023 5E-08 58.0 12.3 30 201-231 124-153 (283)
221 cd05630 STKc_GRK6 Catalytic do 97.4 0.0021 4.6E-08 58.7 12.1 139 41-230 5-150 (285)
222 cd05033 PTKc_EphR Catalytic do 97.4 0.00082 1.8E-08 60.5 9.2 141 41-231 9-155 (266)
223 cd07833 STKc_CDKL Catalytic do 97.4 0.00054 1.2E-08 62.3 8.0 140 41-234 6-152 (288)
224 cd05040 PTKc_Ack_like Catalyti 97.4 0.00048 1E-08 61.6 7.6 140 43-231 2-146 (257)
225 cd06605 PKc_MAPKK Catalytic do 97.4 0.0018 3.9E-08 58.1 11.3 30 200-230 120-149 (265)
226 cd06630 STKc_MEKK1 Catalytic d 97.4 0.00095 2.1E-08 60.0 9.4 137 42-231 6-153 (268)
227 cd07832 STKc_CCRK Catalytic do 97.4 0.0019 4.2E-08 58.6 11.5 137 42-232 6-149 (286)
228 cd05610 STKc_MASTL Catalytic d 97.4 0.0015 3.2E-08 67.4 11.8 139 40-232 8-154 (669)
229 cd05105 PTKc_PDGFR_alpha Catal 97.4 0.004 8.7E-08 60.1 14.1 90 29-120 31-128 (400)
230 KOG0594 Protein kinase PCTAIRE 97.4 0.0023 5E-08 58.7 11.6 31 199-230 138-168 (323)
231 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.4 0.00082 1.8E-08 60.7 8.9 140 44-230 3-148 (269)
232 cd07875 STKc_JNK1 Catalytic do 97.4 0.00082 1.8E-08 63.8 9.2 30 201-231 146-175 (364)
233 cd05586 STKc_Sck1_like Catalyt 97.4 0.001 2.2E-08 62.2 9.6 30 201-231 116-145 (330)
234 cd05148 PTKc_Srm_Brk Catalytic 97.4 0.0017 3.6E-08 58.2 10.7 137 42-231 12-153 (261)
235 cd07853 STKc_NLK Catalytic dom 97.4 0.00063 1.4E-08 64.8 8.3 29 201-230 123-151 (372)
236 cd08221 STKc_Nek9 Catalytic do 97.4 0.0022 4.8E-08 57.2 11.4 141 40-232 4-151 (256)
237 KOG0616 cAMP-dependent protein 97.4 0.00088 1.9E-08 60.2 8.4 136 40-231 48-193 (355)
238 cd08528 STKc_Nek10 Catalytic d 97.4 0.0019 4.1E-08 58.2 10.9 31 200-231 133-163 (269)
239 cd07844 STKc_PCTAIRE_like Cata 97.4 0.002 4.3E-08 58.8 11.2 137 40-230 9-151 (291)
240 cd08225 STKc_Nek5 Catalytic do 97.4 0.00051 1.1E-08 61.3 7.1 141 41-232 5-152 (257)
241 cd05112 PTKc_Itk Catalytic dom 97.4 0.0025 5.4E-08 56.9 11.6 136 41-230 9-148 (256)
242 cd08223 STKc_Nek4 Catalytic do 97.4 0.0029 6.3E-08 56.4 12.0 30 201-231 122-151 (257)
243 cd05581 STKc_PDK1 Catalytic do 97.4 0.00042 9.1E-09 62.6 6.5 138 41-231 6-151 (280)
244 cd06651 STKc_MEKK3 Catalytic d 97.4 0.00069 1.5E-08 61.0 7.9 135 42-230 8-154 (266)
245 cd05101 PTKc_FGFR2 Catalytic d 97.3 0.0016 3.5E-08 60.0 10.4 79 42-120 21-108 (304)
246 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.3 0.0022 4.8E-08 58.3 11.2 142 40-232 8-157 (283)
247 cd05060 PTKc_Syk_like Catalyti 97.3 0.003 6.5E-08 56.5 11.9 138 43-231 2-144 (257)
248 KOG0658 Glycogen synthase kina 97.3 0.00084 1.8E-08 61.8 8.1 32 200-231 144-175 (364)
249 cd05575 STKc_SGK Catalytic dom 97.3 0.0013 2.9E-08 61.3 9.8 30 201-231 116-145 (323)
250 cd05096 PTKc_DDR1 Catalytic do 97.3 0.0016 3.5E-08 60.0 10.3 29 201-230 158-186 (304)
251 cd06622 PKc_MAPKK_PBS2_like Ca 97.3 0.0012 2.6E-08 60.2 9.3 139 42-230 7-151 (286)
252 cd05602 STKc_SGK1 Catalytic do 97.3 0.00095 2.1E-08 62.3 8.8 29 201-230 116-144 (325)
253 cd06628 STKc_MAPKKK_Byr2_like 97.3 0.0025 5.4E-08 57.3 11.2 30 201-231 126-155 (267)
254 cd07864 STKc_CDK12 Catalytic d 97.3 0.0011 2.4E-08 60.9 9.0 30 201-231 136-165 (302)
255 cd08228 STKc_Nek6 Catalytic do 97.3 0.0025 5.3E-08 57.3 11.2 140 42-231 8-155 (267)
256 cd07862 STKc_CDK6 Catalytic do 97.3 0.0031 6.8E-08 57.5 12.0 30 201-231 130-159 (290)
257 cd07874 STKc_JNK3 Catalytic do 97.3 0.00082 1.8E-08 63.5 8.3 30 201-231 139-168 (355)
258 cd06610 STKc_OSR1_SPAK Catalyt 97.3 0.0018 3.9E-08 58.0 10.1 139 41-230 6-150 (267)
259 cd06646 STKc_MAP4K5 Catalytic 97.3 0.0023 5E-08 57.5 10.8 137 41-231 14-155 (267)
260 cd06657 STKc_PAK4 Catalytic do 97.3 0.00086 1.9E-08 61.6 8.1 134 42-230 26-164 (292)
261 cd06636 STKc_MAP4K4_6 Catalyti 97.3 0.0014 3E-08 59.6 9.3 139 42-231 22-170 (282)
262 cd05113 PTKc_Btk_Bmx Catalytic 97.3 0.003 6.6E-08 56.6 11.4 137 41-231 9-149 (256)
263 PHA03390 pk1 serine/threonine- 97.3 0.0046 1E-07 55.9 12.7 133 43-231 23-159 (267)
264 cd05579 STKc_MAST_like Catalyt 97.3 0.0013 2.8E-08 58.8 8.9 31 201-232 113-143 (265)
265 cd06648 STKc_PAK_II Catalytic 97.3 0.0038 8.3E-08 57.0 12.2 136 40-230 23-163 (285)
266 cd05099 PTKc_FGFR4 Catalytic d 97.3 0.0032 6.9E-08 58.4 11.7 80 41-120 17-105 (314)
267 cd05047 PTKc_Tie Catalytic dom 97.3 0.0013 2.8E-08 59.4 8.9 30 200-230 131-160 (270)
268 cd08229 STKc_Nek7 Catalytic do 97.3 0.0021 4.5E-08 57.8 10.2 139 42-230 8-154 (267)
269 cd06626 STKc_MEKK4 Catalytic d 97.3 0.0016 3.4E-08 58.4 9.4 136 42-231 6-148 (264)
270 PHA03209 serine/threonine kina 97.3 0.0026 5.6E-08 60.3 11.2 133 40-231 70-206 (357)
271 cd07870 STKc_PFTAIRE2 Catalyti 97.3 0.0041 8.8E-08 56.8 12.2 137 40-230 9-151 (291)
272 cd06629 STKc_MAPKKK_Bck1_like 97.3 0.0047 1E-07 55.7 12.5 138 41-232 6-158 (272)
273 cd06635 STKc_TAO1 Catalytic do 97.3 0.0017 3.7E-08 60.3 9.7 30 201-231 145-174 (317)
274 cd05577 STKc_GRK Catalytic dom 97.3 0.0016 3.5E-08 59.1 9.4 134 45-230 2-143 (277)
275 cd07841 STKc_CDK7 Catalytic do 97.3 0.0026 5.6E-08 58.3 10.8 137 42-231 6-151 (298)
276 cd08224 STKc_Nek6_Nek7 Catalyt 97.3 0.0022 4.7E-08 57.6 10.2 140 42-231 8-155 (267)
277 cd05108 PTKc_EGFR Catalytic do 97.3 0.0036 7.7E-08 58.1 11.8 143 40-231 11-158 (316)
278 cd05097 PTKc_DDR_like Catalyti 97.3 0.0014 3E-08 60.2 8.9 30 201-231 149-178 (295)
279 PLN00009 cyclin-dependent kina 97.3 0.0052 1.1E-07 56.2 12.7 138 41-230 7-151 (294)
280 cd07836 STKc_Pho85 Catalytic d 97.3 0.0048 1E-07 56.0 12.3 139 40-230 4-148 (284)
281 PHA03207 serine/threonine kina 97.3 0.0023 5E-08 61.5 10.6 134 40-230 96-233 (392)
282 KOG0595 Serine/threonine-prote 97.2 0.0043 9.3E-08 58.1 11.6 147 42-241 16-174 (429)
283 cd06611 STKc_SLK_like Catalyti 97.2 0.0024 5.2E-08 57.9 10.1 137 42-231 11-152 (280)
284 cd05115 PTKc_Zap-70 Catalytic 97.2 0.0041 8.8E-08 55.8 11.5 136 44-230 3-143 (257)
285 cd06609 STKc_MST3_like Catalyt 97.2 0.0021 4.5E-08 58.1 9.6 136 42-231 7-147 (274)
286 cd06637 STKc_TNIK Catalytic do 97.2 0.0023 4.9E-08 57.7 9.9 139 42-231 12-160 (272)
287 cd07840 STKc_CDK9_like Catalyt 97.2 0.0017 3.7E-08 58.8 9.1 137 41-231 4-149 (287)
288 cd05046 PTK_CCK4 Pseudokinase 97.2 0.0051 1.1E-07 55.5 12.1 80 40-120 9-95 (275)
289 cd06652 STKc_MEKK2 Catalytic d 97.2 0.0027 5.9E-08 57.1 10.2 30 201-231 126-155 (265)
290 cd05094 PTKc_TrkC Catalytic do 97.2 0.004 8.7E-08 56.9 11.5 31 199-230 141-171 (291)
291 cd05605 STKc_GRK4_like Catalyt 97.2 0.0019 4.1E-08 59.0 9.3 139 41-231 5-151 (285)
292 cd05061 PTKc_InsR Catalytic do 97.2 0.0034 7.4E-08 57.3 10.9 149 41-230 11-167 (288)
293 cd05062 PTKc_IGF-1R Catalytic 97.2 0.0024 5.3E-08 57.8 9.9 29 201-230 139-167 (277)
294 cd07880 STKc_p38gamma_MAPK12 C 97.2 0.0031 6.6E-08 59.4 10.8 30 201-231 138-167 (343)
295 cd05045 PTKc_RET Catalytic dom 97.2 0.0015 3.2E-08 59.7 8.5 31 200-231 146-176 (290)
296 KOG0583 Serine/threonine prote 97.2 0.0033 7.1E-08 59.9 11.0 142 40-233 21-172 (370)
297 cd05042 PTKc_Aatyk Catalytic d 97.2 0.0043 9.4E-08 55.9 11.4 29 201-230 120-148 (269)
298 cd07847 STKc_CDKL1_4 Catalytic 97.2 0.0039 8.4E-08 56.6 10.9 138 41-232 6-150 (286)
299 PTZ00284 protein kinase; Provi 97.2 0.0051 1.1E-07 60.6 12.4 53 41-97 134-186 (467)
300 cd05053 PTKc_FGFR Catalytic do 97.2 0.0043 9.4E-08 56.6 11.2 80 41-120 17-103 (293)
301 cd06632 STKc_MEKK1_plant Catal 97.2 0.0034 7.3E-08 55.9 10.3 136 42-231 6-151 (258)
302 cd06642 STKc_STK25-YSK1 Cataly 97.2 0.0016 3.5E-08 59.0 8.2 30 200-230 120-149 (277)
303 KOG0600 Cdc2-related protein k 97.2 0.0013 2.8E-08 63.1 7.5 139 40-231 121-267 (560)
304 cd06607 STKc_TAO Catalytic dom 97.2 0.0035 7.6E-08 57.9 10.4 31 201-232 135-165 (307)
305 cd07866 STKc_BUR1 Catalytic do 97.1 0.0021 4.6E-08 59.1 8.8 30 201-231 135-164 (311)
306 cd05063 PTKc_EphR_A2 Catalytic 97.1 0.004 8.6E-08 56.0 10.4 29 201-230 127-155 (268)
307 cd07839 STKc_CDK5 Catalytic do 97.1 0.0028 6.1E-08 57.6 9.4 136 41-230 5-147 (284)
308 cd07867 STKc_CDC2L6 Catalytic 97.1 0.0064 1.4E-07 56.2 11.9 72 42-117 7-84 (317)
309 cd05092 PTKc_TrkA Catalytic do 97.1 0.0023 5E-08 58.2 8.8 80 41-121 10-95 (280)
310 cd05036 PTKc_ALK_LTK Catalytic 97.1 0.0016 3.4E-08 59.1 7.6 79 41-120 11-96 (277)
311 cd07830 STKc_MAK_like Catalyti 97.1 0.0011 2.5E-08 60.0 6.7 29 201-230 119-147 (283)
312 cd05118 STKc_CMGC Catalytic do 97.1 0.004 8.8E-08 56.3 10.3 139 42-234 5-150 (283)
313 cd05098 PTKc_FGFR1 Catalytic d 97.1 0.0029 6.3E-08 58.4 9.3 80 41-120 23-111 (307)
314 cd06631 STKc_YSK4 Catalytic do 97.1 0.0047 1E-07 55.4 10.5 135 42-231 6-151 (265)
315 smart00221 STYKc Protein kinas 97.1 0.0094 2E-07 51.6 12.1 138 42-232 5-148 (225)
316 cd07859 STKc_TDY_MAPK_plant Ca 97.1 0.0035 7.6E-08 58.5 10.0 29 201-230 123-151 (338)
317 cd05065 PTKc_EphR_B Catalytic 97.1 0.0068 1.5E-07 54.6 11.4 139 42-230 10-154 (269)
318 cd06618 PKc_MKK7 Catalytic dom 97.1 0.0044 9.5E-08 56.8 10.2 29 201-230 135-163 (296)
319 cd07845 STKc_CDK10 Catalytic d 97.1 0.0063 1.4E-07 56.1 11.4 138 40-231 11-157 (309)
320 cd05123 STKc_AGC Catalytic dom 97.1 0.0024 5.3E-08 56.6 8.3 133 45-231 2-142 (250)
321 cd06620 PKc_MAPKK_Byr1_like Ca 97.1 0.0061 1.3E-07 55.5 11.0 136 42-230 11-152 (284)
322 KOG0667 Dual-specificity tyros 97.1 0.007 1.5E-07 59.8 11.8 38 199-236 307-345 (586)
323 cd07868 STKc_CDK8 Catalytic do 97.1 0.0061 1.3E-07 56.4 11.2 72 42-117 7-84 (317)
324 cd07835 STKc_CDK1_like Catalyt 97.1 0.0051 1.1E-07 55.8 10.5 136 42-230 5-147 (283)
325 cd06658 STKc_PAK5 Catalytic do 97.1 0.00094 2E-08 61.3 5.6 135 41-230 27-166 (292)
326 cd05103 PTKc_VEGFR2 Catalytic 97.1 0.0035 7.6E-08 59.0 9.6 80 41-120 12-99 (343)
327 cd06634 STKc_TAO2 Catalytic do 97.1 0.0017 3.7E-08 60.0 7.4 30 201-231 135-164 (308)
328 cd05116 PTKc_Syk Catalytic dom 97.1 0.0047 1E-07 55.2 10.1 29 201-230 115-143 (257)
329 cd05048 PTKc_Ror Catalytic Dom 97.1 0.0044 9.6E-08 56.2 10.0 30 201-231 144-173 (283)
330 cd05044 PTKc_c-ros Catalytic d 97.0 0.0021 4.5E-08 57.8 7.7 29 201-230 126-159 (269)
331 cd05090 PTKc_Ror1 Catalytic do 97.0 0.0046 9.9E-08 56.2 10.0 30 201-231 144-173 (283)
332 cd05037 PTK_Jak_rpt1 Pseudokin 97.0 0.0045 9.7E-08 55.2 9.7 32 200-231 120-157 (259)
333 cd07849 STKc_ERK1_2_like Catal 97.0 0.0025 5.4E-08 59.7 8.4 30 201-231 126-155 (336)
334 cd07860 STKc_CDK2_3 Catalytic 97.0 0.0058 1.2E-07 55.5 10.5 138 40-230 4-148 (284)
335 cd08218 STKc_Nek1 Catalytic do 97.0 0.011 2.3E-07 52.8 12.0 139 41-231 5-150 (256)
336 cd05095 PTKc_DDR2 Catalytic do 97.0 0.0046 1E-07 56.7 9.9 30 201-231 150-179 (296)
337 cd06645 STKc_MAP4K3 Catalytic 97.0 0.0058 1.3E-07 54.9 10.3 135 42-230 15-154 (267)
338 cd05100 PTKc_FGFR3 Catalytic d 97.0 0.0061 1.3E-07 57.0 10.5 80 41-120 17-105 (334)
339 cd07843 STKc_CDC2L1 Catalytic 97.0 0.0029 6.2E-08 57.9 8.0 29 201-230 126-154 (293)
340 KOG0593 Predicted protein kina 97.0 0.00071 1.5E-08 61.0 3.7 137 42-231 8-150 (396)
341 cd05057 PTKc_EGFR_like Catalyt 97.0 0.011 2.4E-07 53.6 11.7 142 41-231 12-158 (279)
342 cd07831 STKc_MOK Catalytic dom 97.0 0.01 2.2E-07 53.7 11.4 137 41-231 4-148 (282)
343 cd05055 PTKc_PDGFR Catalytic d 97.0 0.0092 2E-07 55.0 11.2 142 42-230 41-189 (302)
344 PTZ00024 cyclin-dependent prot 97.0 0.0068 1.5E-07 56.7 10.5 29 201-230 139-167 (335)
345 cd05054 PTKc_VEGFR Catalytic d 96.9 0.0039 8.5E-08 58.6 8.8 31 200-231 192-222 (337)
346 cd05089 PTKc_Tie1 Catalytic do 96.9 0.0091 2E-07 54.8 11.1 30 200-230 138-167 (297)
347 KOG0578 p21-activated serine/t 96.9 0.0033 7.2E-08 61.1 8.1 140 40-236 277-423 (550)
348 cd08530 STKc_CNK2-like Catalyt 96.9 0.01 2.2E-07 52.8 10.8 30 201-231 123-152 (256)
349 KOG0598 Ribosomal protein S6 k 96.9 0.0056 1.2E-07 56.5 9.0 142 37-232 25-175 (357)
350 cd05064 PTKc_EphR_A10 Catalyti 96.9 0.01 2.2E-07 53.4 10.8 144 38-231 6-156 (266)
351 cd07856 STKc_Sty1_Hog1 Catalyt 96.9 0.0081 1.7E-07 56.2 10.3 136 40-231 14-157 (328)
352 cd06659 STKc_PAK6 Catalytic do 96.9 0.0049 1.1E-07 56.7 8.6 29 201-230 137-165 (297)
353 cd08216 PK_STRAD Pseudokinase 96.9 0.008 1.7E-07 55.5 10.1 29 201-230 121-149 (314)
354 cd07850 STKc_JNK Catalytic dom 96.9 0.011 2.4E-07 55.8 11.0 30 201-231 138-167 (353)
355 cd05035 PTKc_Axl_like Catalyti 96.8 0.01 2.2E-07 53.3 10.4 30 201-231 133-162 (273)
356 cd06647 STKc_PAK_I Catalytic d 96.8 0.0069 1.5E-07 55.5 9.4 136 40-230 23-163 (293)
357 cd05606 STKc_beta_ARK Catalyti 96.8 0.012 2.5E-07 53.5 10.7 29 201-230 117-145 (278)
358 cd07842 STKc_CDK8_like Catalyt 96.8 0.016 3.5E-07 53.3 11.8 73 42-117 6-88 (316)
359 cd05107 PTKc_PDGFR_beta Cataly 96.8 0.013 2.7E-07 56.7 11.1 79 42-120 43-128 (401)
360 cd06653 STKc_MEKK3_like_1 Cata 96.8 0.014 3E-07 52.4 10.9 136 42-231 8-155 (264)
361 cd05056 PTKc_FAK Catalytic dom 96.8 0.017 3.7E-07 51.9 11.5 140 42-231 12-156 (270)
362 cd06616 PKc_MKK4 Catalytic dom 96.8 0.013 2.8E-07 53.3 10.7 29 201-230 128-156 (288)
363 PHA02988 hypothetical protein; 96.8 0.012 2.6E-07 53.7 10.5 73 42-121 26-110 (283)
364 KOG1163 Casein kinase (serine/ 96.8 0.021 4.5E-07 50.3 11.0 71 40-115 19-93 (341)
365 cd07879 STKc_p38delta_MAPK13 C 96.8 0.01 2.3E-07 55.7 10.2 30 201-231 137-166 (342)
366 cd05051 PTKc_DDR Catalytic dom 96.8 0.0081 1.7E-07 54.9 9.3 29 201-230 150-178 (296)
367 cd07852 STKc_MAPK15 Catalytic 96.8 0.01 2.3E-07 55.5 10.1 29 201-230 127-155 (337)
368 cd05032 PTKc_InsR_like Catalyt 96.8 0.022 4.7E-07 51.4 11.9 30 200-230 138-167 (277)
369 cd05058 PTKc_Met_Ron Catalytic 96.8 0.0048 1E-07 55.2 7.5 29 201-230 118-146 (262)
370 cd06633 STKc_TAO3 Catalytic do 96.7 0.019 4E-07 53.2 11.6 138 40-231 25-170 (313)
371 KOG0615 Serine/threonine prote 96.7 0.0088 1.9E-07 56.2 8.8 139 40-231 176-328 (475)
372 cd05050 PTKc_Musk Catalytic do 96.7 0.01 2.2E-07 54.1 9.4 30 200-230 149-178 (288)
373 cd07838 STKc_CDK4_6_like Catal 96.7 0.031 6.7E-07 50.6 12.5 30 201-231 127-156 (287)
374 cd07857 STKc_MPK1 Catalytic do 96.7 0.012 2.7E-07 54.9 10.0 29 201-230 125-153 (332)
375 PTZ00266 NIMA-related protein 96.6 0.028 6E-07 59.7 12.8 76 40-120 17-101 (1021)
376 cd07865 STKc_CDK9 Catalytic do 96.6 0.025 5.4E-07 51.9 11.2 30 201-231 139-168 (310)
377 cd05091 PTKc_Ror2 Catalytic do 96.6 0.023 5E-07 51.5 10.7 30 201-231 144-173 (283)
378 cd05077 PTK_Jak1_rpt1 Pseudoki 96.6 0.018 3.9E-07 51.8 9.8 31 200-230 124-160 (262)
379 PTZ00283 serine/threonine prot 96.6 0.031 6.7E-07 55.6 12.3 29 201-230 163-191 (496)
380 cd05110 PTKc_HER4 Catalytic do 96.6 0.027 5.8E-07 51.9 11.1 31 200-231 128-158 (303)
381 cd05086 PTKc_Aatyk2 Catalytic 96.5 0.03 6.4E-07 50.5 11.2 29 201-230 119-147 (268)
382 smart00220 S_TKc Serine/Threon 96.5 0.019 4.2E-07 50.0 9.6 33 201-234 107-139 (244)
383 KOG0668 Casein kinase II, alph 96.5 0.0014 3E-08 56.9 2.0 41 197-237 148-188 (338)
384 cd07834 STKc_MAPK Catalytic do 96.5 0.013 2.8E-07 54.5 8.8 31 201-232 123-153 (330)
385 KOG0192 Tyrosine kinase specif 96.5 0.044 9.5E-07 52.0 12.1 137 44-232 49-194 (362)
386 KOG0032 Ca2+/calmodulin-depend 96.5 0.0092 2E-07 57.0 7.6 140 42-234 41-191 (382)
387 cd07877 STKc_p38alpha_MAPK14 C 96.5 0.016 3.5E-07 54.5 9.2 30 201-231 140-169 (345)
388 cd05111 PTK_HER3 Pseudokinase 96.4 0.029 6.3E-07 50.9 10.4 30 201-231 129-158 (279)
389 cd07855 STKc_ERK5 Catalytic do 96.4 0.013 2.9E-07 54.7 8.3 29 201-230 127-155 (334)
390 KOG0596 Dual specificity; seri 96.4 0.0096 2.1E-07 58.0 7.1 28 201-230 480-507 (677)
391 KOG4250 TANK binding protein k 96.4 0.0084 1.8E-07 59.9 6.7 141 42-231 19-173 (732)
392 cd07854 STKc_MAPK4_6 Catalytic 96.3 0.01 2.2E-07 55.8 7.1 31 201-231 134-164 (342)
393 cd07829 STKc_CDK_like Catalyti 96.3 0.017 3.7E-07 52.2 8.3 30 201-231 118-147 (282)
394 COG3281 Ble Uncharacterized pr 96.3 0.0052 1.1E-07 56.4 4.3 44 200-245 284-336 (438)
395 KOG1989 ARK protein kinase fam 96.2 0.038 8.3E-07 56.4 10.8 39 197-236 162-200 (738)
396 cd08227 PK_STRAD_alpha Pseudok 96.2 0.055 1.2E-06 50.4 11.3 26 201-227 121-146 (327)
397 cd05576 STKc_RPK118_like Catal 96.2 0.035 7.6E-07 49.1 9.5 29 201-230 105-133 (237)
398 cd07858 STKc_TEY_MAPK_plant Ca 96.1 0.033 7.2E-07 52.1 9.2 30 201-231 128-157 (337)
399 cd05043 PTK_Ryk Pseudokinase d 96.1 0.12 2.6E-06 46.7 12.4 30 200-230 136-165 (280)
400 KOG0694 Serine/threonine prote 96.1 0.036 7.8E-07 55.3 9.3 138 41-233 373-519 (694)
401 KOG0588 Serine/threonine prote 96.0 0.04 8.6E-07 55.0 9.3 139 42-234 18-164 (786)
402 KOG0984 Mitogen-activated prot 96.0 0.0039 8.5E-08 53.4 2.0 33 198-231 166-198 (282)
403 PF07714 Pkinase_Tyr: Protein 96.0 0.053 1.1E-06 48.7 9.6 144 41-232 4-153 (259)
404 KOG0587 Traf2- and Nck-interac 96.0 0.12 2.6E-06 53.2 12.6 139 41-230 24-171 (953)
405 KOG1164 Casein kinase (serine/ 95.9 0.089 1.9E-06 49.1 11.0 63 41-106 23-89 (322)
406 KOG2269 Serine/threonine prote 95.7 0.038 8.3E-07 51.0 7.4 97 84-229 333-430 (531)
407 KOG0983 Mitogen-activated prot 95.5 0.01 2.2E-07 53.1 2.7 35 196-231 207-241 (391)
408 KOG0603 Ribosomal protein S6 k 95.5 0.018 3.8E-07 57.0 4.5 37 199-235 433-469 (612)
409 KOG0193 Serine/threonine prote 95.4 0.027 5.8E-07 55.5 5.6 141 37-233 393-539 (678)
410 cd08222 STKc_Nek11 Catalytic d 95.4 0.039 8.4E-07 49.3 6.4 30 200-231 125-154 (260)
411 cd08226 PK_STRAD_beta Pseudoki 95.4 0.21 4.5E-06 46.5 11.5 26 201-227 121-146 (328)
412 cd05076 PTK_Tyk2_rpt1 Pseudoki 95.3 0.1 2.2E-06 47.2 8.9 29 201-229 137-171 (274)
413 PHA02882 putative serine/threo 95.3 0.013 2.8E-07 53.7 3.0 29 201-230 146-174 (294)
414 KOG0197 Tyrosine kinases [Sign 95.3 0.06 1.3E-06 52.0 7.4 138 41-231 211-352 (468)
415 KOG0662 Cyclin-dependent kinas 95.2 0.055 1.2E-06 45.4 5.9 32 198-230 118-149 (292)
416 KOG0670 U4/U6-associated splic 95.1 0.19 4.1E-06 49.1 10.1 33 199-231 554-586 (752)
417 KOG0582 Ste20-like serine/thre 94.9 0.31 6.7E-06 46.7 10.7 79 35-118 24-109 (516)
418 KOG1167 Serine/threonine prote 94.9 0.028 6.2E-07 52.9 3.8 35 197-231 148-182 (418)
419 KOG0575 Polo-like serine/threo 94.8 0.41 9E-06 47.4 11.7 136 42-231 24-167 (592)
420 PLN00113 leucine-rich repeat r 94.8 0.17 3.8E-06 54.5 10.2 71 42-120 696-770 (968)
421 PLN03225 Serine/threonine-prot 94.7 0.022 4.7E-07 57.6 2.9 31 200-230 274-304 (566)
422 cd07878 STKc_p38beta_MAPK11 Ca 94.7 0.023 4.9E-07 53.3 2.8 30 201-231 138-167 (343)
423 KOG0599 Phosphorylase kinase g 94.6 0.018 3.9E-07 51.5 1.7 41 200-241 142-182 (411)
424 KOG1006 Mitogen-activated prot 94.3 0.031 6.7E-07 49.9 2.5 32 199-231 186-217 (361)
425 cd05075 PTKc_Axl Catalytic dom 94.3 0.027 5.8E-07 50.6 2.3 30 201-231 132-161 (272)
426 KOG0660 Mitogen-activated prot 94.3 0.02 4.3E-07 52.9 1.4 35 199-234 143-177 (359)
427 PHA03210 serine/threonine kina 94.2 0.028 6.1E-07 55.9 2.3 29 201-230 287-315 (501)
428 KOG2052 Activin A type IB rece 93.8 0.23 5E-06 47.5 7.3 39 195-234 330-368 (513)
429 PRK10345 hypothetical protein; 93.7 0.21 4.6E-06 43.6 6.7 59 41-106 7-70 (210)
430 KOG0663 Protein kinase PITSLRE 93.6 0.076 1.6E-06 48.9 3.8 35 199-234 195-230 (419)
431 KOG1035 eIF-2alpha kinase GCN2 93.5 0.059 1.3E-06 57.3 3.3 33 198-231 714-746 (1351)
432 KOG2345 Serine/threonine prote 93.4 0.061 1.3E-06 47.5 2.7 33 201-234 149-181 (302)
433 KOG1166 Mitotic checkpoint ser 93.2 0.055 1.2E-06 57.0 2.5 32 199-230 812-849 (974)
434 KOG0659 Cdk activating kinase 93.1 0.056 1.2E-06 48.2 2.0 140 40-233 6-152 (318)
435 KOG0589 Serine/threonine prote 93.1 0.51 1.1E-05 45.4 8.6 147 40-240 8-164 (426)
436 PLN03224 probable serine/threo 93.0 0.081 1.8E-06 52.5 3.2 30 200-230 328-357 (507)
437 cd05074 PTKc_Tyro3 Catalytic d 92.9 0.087 1.9E-06 47.3 3.1 30 201-231 133-162 (273)
438 PF10009 DUF2252: Uncharacteri 92.2 0.18 3.9E-06 48.3 4.3 75 196-278 39-119 (385)
439 cd07851 STKc_p38 Catalytic dom 92.2 0.094 2E-06 49.2 2.4 30 201-231 138-167 (343)
440 KOG0665 Jun-N-terminal kinase 92.1 0.078 1.7E-06 48.5 1.7 37 198-235 135-171 (369)
441 PLN00181 protein SPA1-RELATED; 92.0 0.18 4E-06 53.2 4.5 32 199-231 98-129 (793)
442 COG4320 Uncharacterized protei 91.7 0.44 9.6E-06 43.4 5.9 76 196-277 54-133 (410)
443 KOG0664 Nemo-like MAPK-related 91.4 0.11 2.5E-06 46.5 1.8 34 200-234 175-208 (449)
444 KOG0604 MAP kinase-activated p 91.3 0.089 1.9E-06 47.8 1.1 40 200-239 180-221 (400)
445 KOG1165 Casein kinase (serine/ 91.3 2.2 4.8E-05 39.7 9.9 32 199-230 142-177 (449)
446 KOG4236 Serine/threonine prote 91.3 1.7 3.7E-05 42.8 9.7 139 42-231 570-716 (888)
447 PF12260 PIP49_C: Protein-kina 91.2 2.8 6E-05 35.9 10.2 106 85-234 8-114 (188)
448 KOG0584 Serine/threonine prote 90.5 0.36 7.8E-06 48.0 4.5 33 198-230 162-194 (632)
449 PF10707 YrbL-PhoP_reg: PhoP r 90.5 6.7 0.00014 33.9 12.0 69 42-117 7-101 (199)
450 KOG0198 MEKK and related serin 90.3 0.28 6.1E-06 45.5 3.5 137 40-231 21-167 (313)
451 KOG0577 Serine/threonine prote 90.2 0.13 2.8E-06 51.0 1.1 37 201-238 146-182 (948)
452 KOG0591 NIMA (never in mitosis 90.1 0.16 3.5E-06 45.8 1.6 31 200-231 147-177 (375)
453 KOG0585 Ca2+/calmodulin-depend 90.0 0.19 4.1E-06 48.4 2.1 32 200-232 229-260 (576)
454 KOG0661 MAPK related serine/th 89.5 0.26 5.7E-06 47.4 2.6 32 198-230 127-158 (538)
455 KOG0671 LAMMER dual specificit 88.8 0.58 1.2E-05 43.9 4.2 57 177-234 189-264 (415)
456 cd05078 PTK_Jak2_Jak3_rpt1 Pse 88.5 0.51 1.1E-05 42.0 3.8 30 201-230 120-156 (258)
457 KOG0612 Rho-associated, coiled 88.3 0.22 4.8E-06 52.8 1.4 30 199-229 193-222 (1317)
458 KOG1152 Signal transduction se 87.9 0.38 8.3E-06 47.6 2.6 34 197-231 686-719 (772)
459 KOG3653 Transforming growth fa 87.4 0.65 1.4E-05 44.8 3.8 44 197-241 332-375 (534)
460 COG5072 ALK1 Serine/threonine 87.3 0.74 1.6E-05 43.5 4.0 43 196-240 337-379 (488)
461 KOG0669 Cyclin T-dependent kin 86.6 0.39 8.5E-06 42.7 1.7 50 178-229 122-171 (376)
462 KOG0579 Ste20-like serine/thre 86.5 0.38 8.2E-06 48.2 1.8 30 201-231 150-179 (1187)
463 KOG0666 Cyclin C-dependent kin 86.1 0.46 9.9E-06 43.6 1.9 30 201-230 152-184 (438)
464 PF07387 Seadorna_VP7: Seadorn 85.8 0.59 1.3E-05 41.1 2.4 29 197-226 159-187 (308)
465 KOG0586 Serine/threonine prote 83.9 0.75 1.6E-05 45.6 2.4 44 199-247 173-216 (596)
466 KOG1151 Tousled-like protein k 83.3 0.94 2E-05 43.5 2.7 35 197-231 586-622 (775)
467 PF14531 Kinase-like: Kinase-l 83.0 0.54 1.2E-05 43.1 1.0 31 200-231 164-194 (288)
468 KOG0611 Predicted serine/threo 82.1 1 2.3E-05 42.8 2.5 46 198-248 170-215 (668)
469 TIGR02569 TIGR02569_actnb cons 81.3 2.4 5.3E-05 37.8 4.4 58 184-244 158-215 (272)
470 KOG4279 Serine/threonine prote 81.1 9 0.00019 39.4 8.6 31 199-229 693-723 (1226)
471 KOG1290 Serine/threonine prote 81.1 2.2 4.7E-05 41.6 4.3 55 36-97 78-135 (590)
472 KOG0607 MAP kinase-interacting 80.9 2 4.4E-05 39.7 3.8 34 197-230 192-227 (463)
473 KOG4717 Serine/threonine prote 80.3 1.6 3.4E-05 42.9 3.1 33 198-230 135-167 (864)
474 KOG0590 Checkpoint kinase and 77.8 2.1 4.5E-05 43.7 3.3 40 197-237 436-475 (601)
475 cd05172 PIKKc_DNA-PK DNA-depen 77.0 2 4.2E-05 38.3 2.5 32 198-229 134-165 (235)
476 KOG1345 Serine/threonine kinas 76.3 2.8 6.1E-05 37.9 3.3 35 197-231 137-172 (378)
477 cd00142 PI3Kc_like Phosphoinos 75.9 2.2 4.8E-05 37.4 2.6 35 200-234 128-162 (219)
478 cd05170 PIKKc_SMG1 Suppressor 75.1 2.3 5E-05 39.5 2.6 32 198-229 207-238 (307)
479 cd05171 PIKKc_ATM Ataxia telan 74.9 2.2 4.8E-05 39.0 2.4 32 198-229 179-210 (279)
480 cd00892 PIKKc_ATR ATR (Ataxia 74.6 2.3 4.9E-05 37.9 2.3 32 199-230 138-169 (237)
481 KOG0597 Serine-threonine prote 74.6 2 4.3E-05 42.7 2.1 31 199-230 118-148 (808)
482 cd05163 TRRAP TRansformation/t 74.4 3 6.4E-05 37.6 3.0 31 199-229 153-183 (253)
483 KOG0574 STE20-like serine/thre 73.3 0.98 2.1E-05 41.2 -0.3 27 203-230 151-177 (502)
484 KOG0580 Serine/threonine prote 73.2 1.8 3.9E-05 38.3 1.2 36 197-233 140-175 (281)
485 KOG0614 cGMP-dependent protein 73.0 1.6 3.5E-05 42.7 1.0 32 198-230 537-568 (732)
486 KOG1240 Protein kinase contain 72.4 1.1 2.4E-05 47.9 -0.2 29 198-227 137-165 (1431)
487 COG0515 SPS1 Serine/threonine 72.1 2 4.3E-05 38.5 1.4 30 201-230 121-150 (384)
488 KOG0199 ACK and related non-re 71.8 14 0.0003 38.1 7.1 142 43-230 117-260 (1039)
489 KOG1236 Predicted unusual prot 71.4 8.2 0.00018 37.3 5.2 29 201-229 365-396 (565)
490 PF09192 Act-Frag_cataly: Acti 71.4 41 0.0009 30.5 9.5 35 206-240 183-219 (275)
491 cd05169 PIKKc_TOR TOR (Target 71.3 2.8 6E-05 38.3 2.2 32 198-229 179-210 (280)
492 cd05164 PIKKc Phosphoinositide 70.9 3 6.4E-05 36.8 2.2 31 200-230 131-161 (222)
493 smart00146 PI3Kc Phosphoinosit 70.6 3.4 7.3E-05 35.8 2.4 33 200-233 101-133 (202)
494 KOG1027 Serine/threonine prote 68.7 3 6.5E-05 43.2 1.9 31 200-230 625-659 (903)
495 KOG4721 Serine/threonine prote 67.6 2.6 5.7E-05 41.9 1.2 29 201-230 232-260 (904)
496 cd05124 AFK Actin-Fragmin Kina 67.5 51 0.0011 29.2 8.9 50 39-101 2-52 (238)
497 KOG1094 Discoidin domain recep 66.8 2.9 6.2E-05 41.8 1.3 30 200-230 656-685 (807)
498 KOG4645 MAPKKK (MAP kinase kin 63.6 4.7 0.0001 44.0 2.2 48 199-247 1352-1400(1509)
499 KOG0201 Serine/threonine prote 63.0 5.9 0.00013 38.1 2.5 139 39-231 16-160 (467)
500 PF05445 Pox_ser-thr_kin: Poxv 59.7 8.3 0.00018 36.3 2.8 21 197-217 295-315 (434)
No 1
>PLN02236 choline kinase
Probab=100.00 E-value=7.5e-61 Score=449.47 Aligned_cols=344 Identities=74% Similarity=1.234 Sum_probs=299.8
Q ss_pred CccchhhhhccCCCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc
Q 018207 1 MGAIENVMENKESRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF 80 (359)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~ 80 (359)
||..+-..+-.-...+..++++|.++.|.|..+.+++.+++++++||+||.+|+++........++++|+|+++.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~ 80 (344)
T PLN02236 1 MGMVEKTVGLSSGRIPDELKRILHSLASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELF 80 (344)
T ss_pred CCcccccccccCCCChHHHHHHHHHhcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCee
Confidence 55555555555566889999999999999987657789999999999999999998642111124799999999888889
Q ss_pred cchHHHHHHHHHHhcCCCCceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHH
Q 018207 81 FDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRN 160 (359)
Q Consensus 81 ~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~ 160 (359)
+||+.|..+++.|++.|++|++++.+++|+|++|++|++++..++.++....++|+.|++||+++.+....+.+++.+..
T Consensus 81 idR~~E~~~~~~l~~~gl~P~~~~~~~~g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~ 160 (344)
T PLN02236 81 FDRDDEIRTFECMSRHGQGPRLLGRFPNGRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRN 160 (344)
T ss_pred echHHHHHHHHHHHHcCCCCceEEEECCceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999998876666788999999
Q ss_pred HHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHH
Q 018207 161 WLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIAN 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~ 240 (359)
|...+.+...+.....+..+.+.+++..|++.+.....+.|+||||++++|||++++++.+.+||||||++|+|+||||+
T Consensus 161 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~~Dia~ 240 (344)
T PLN02236 161 WLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVAYDIAN 240 (344)
T ss_pred HHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchHHHHHH
Confidence 99877655443323334566788888888887765577889999999999999987446799999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcccCCCC
Q 018207 241 HFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEID 320 (359)
Q Consensus 241 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~~~~~~ 320 (359)
++++++.+|+..+|+.+++..+|+.++++.|++.|++..|..+++.++++++.+|+.|.+++|++|++||++|+..|+++
T Consensus 241 ~~~e~~~~y~~~~~~~~~~~~~~~~~~~~~fi~~Yl~~~g~~~~~~~~~~l~~~v~~~~~~~~l~W~lWa~iq~~~s~~~ 320 (344)
T PLN02236 241 HFCEMAADYHSETPHILDYSKYPGEEERRRFIRTYLSSSGEEPSDEEVEQLLDDVEKYTLASHLFWGLWGIISGHVNKID 320 (344)
T ss_pred HHHHHHHhhcCCCcccCchhhCcCHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhhHhHHHHHHHHHHhcccCCCC
Confidence 99999998887778888888899899999999999987777778889999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccccccCC
Q 018207 321 FDYIGYAKQRFDQYWLTKPELLGS 344 (359)
Q Consensus 321 ~dy~~y~~~r~~~~~~~~~~~~~~ 344 (359)
|||+.||+.|++.|+++|+.+.++
T Consensus 321 fdy~~Ya~~R~~~y~~~k~~~~~~ 344 (344)
T PLN02236 321 FDYMEYARQRFEQYWLRKPELLGS 344 (344)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999998764
No 2
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=100.00 E-value=3.6e-57 Score=422.73 Aligned_cols=316 Identities=34% Similarity=0.646 Sum_probs=269.2
Q ss_pred HHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCce
Q 018207 22 LLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPR 101 (359)
Q Consensus 22 ~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~ 101 (359)
+|.++.|.|..+ +.+.+++++++||+||.+|+|+..... ..+.++|+|+++.+++.++||+.|..+++.|++.|++|+
T Consensus 1 ~~~~~~~~w~~~-~~~~i~i~~l~gGlTN~~~~v~~~~~~-~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~ 78 (330)
T PLN02421 1 VCKALFKGWSDL-DDSDFSVERISGGITNLLLKVSVKEEN-GNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAK 78 (330)
T ss_pred CchHhCCccccC-CcCceEEEEeCCcccceEEEEEecCCC-CCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCc
Confidence 478899999876 568899999999999999999754211 113499999999888889999999999999999999999
Q ss_pred eEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCC--hhh---hhh
Q 018207 102 LLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSP--PEE---ARA 176 (359)
Q Consensus 102 ~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~ 176 (359)
+++.+++|+|++||+|++++..++.++..+..+|+.|++||+.+.+....|.+|+.+.+|+..+..... +.. ...
T Consensus 79 ~l~~~~~G~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~ 158 (330)
T PLN02421 79 LLGVFGNGMIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYET 158 (330)
T ss_pred eeEEeCCcEeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcc
Confidence 999999999999999999998888888899999999999999988776667889999999988764321 111 111
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCC
Q 018207 177 FRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHL 256 (359)
Q Consensus 177 ~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~ 256 (359)
.....+.+++..+++.+.....+.|+||||++++|||++++++.+++||||||++|+|+||||++++|+++ +.
T Consensus 159 ~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f~E~~~-------~~ 231 (330)
T PLN02421 159 ISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHFNEYAG-------FD 231 (330)
T ss_pred cCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHHHHHcc-------cc
Confidence 23556777777777777666788999999999999999864467999999999999999999999999875 24
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcccCCCCCCHHHHHHHHHHHHH
Q 018207 257 MDYSKYPDLEERHRFLHAYLSST-GDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYW 335 (359)
Q Consensus 257 ~~~~~~~~~~~~~~fl~~Y~~~~-~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~~~~~~~dy~~y~~~r~~~~~ 335 (359)
++++.||+.+++..|++.|++.. +...++.++++++.+|+.|+++++++|++||++|+..|.++|||+.||..|+++|+
T Consensus 232 ~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~W~lWa~iq~~~s~i~fdf~~ya~~R~~~y~ 311 (330)
T PLN02421 232 CDYSLYPSKEEQYHFFRHYLRPDDPEEVSDAELEELFVETNFYALASHLYWAIWAIVQAKMSPIDFDYLGYFFLRYKEYK 311 (330)
T ss_pred cCcccCcCHHHHHHHHHHhCCcccCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcCCcCCCHHHHHHHHHHHHH
Confidence 56778888999999999998642 22456778999999999999999999999999999999999999999999999999
Q ss_pred hccccccCCCC
Q 018207 336 LTKPELLGSSG 346 (359)
Q Consensus 336 ~~~~~~~~~~~ 346 (359)
+.|+++.++.+
T Consensus 312 ~~k~~~~~~~~ 322 (330)
T PLN02421 312 RQKEKLLSLVR 322 (330)
T ss_pred HHHHHHhccch
Confidence 99999976643
No 3
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-57 Score=397.56 Aligned_cols=317 Identities=37% Similarity=0.648 Sum_probs=284.5
Q ss_pred HHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcC
Q 018207 17 VEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKH 96 (359)
Q Consensus 17 ~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~ 96 (359)
..++++|+.+.|.|.. ..++++.+++|.||..+.+.... .-...+++|+|+..++..+||++|....+.|+..
T Consensus 66 ~ga~eLlk~Lrp~W~~----~~v~~~~fs~gitNkL~~~~vg~---~~e~~v~vrvyg~~te~vIdre~Ev~afk~L~a~ 138 (391)
T KOG4720|consen 66 PGALELLKKLRPHWKP----PEVTFKRFSDGITNKLFSCYVGE---NMEDHVLVRVYGHNTELVIDRENEVIAFKLLAAY 138 (391)
T ss_pred hhHHHHHHHhcccCCc----cceeeeeeccchhHHHHHhhccc---ccceeEEEEeccCCCceeeccHHHHHHHHHHHHc
Confidence 6788999999999964 77899999999999999886532 1247899999999999999999999999999999
Q ss_pred CCCceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCC-CCCcccchHHHHHHHHHhhcCCChh---
Q 018207 97 GQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMP-GQKIVRLWDRSRNWLIATKNLSPPE--- 172 (359)
Q Consensus 97 gl~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 172 (359)
|++|++|+.+.+|+|++||+|++|.++.+++|++.+.||+.||+||++..+ ..+.|.+|..+.+|++.+.....+.
T Consensus 139 G~ap~Ly~tF~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~g~~pkp~lw~km~~f~~lv~~~f~de~~k 218 (391)
T KOG4720|consen 139 GFAPKLYGTFNNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVATGGNPKPPLWEKMRKFLQLVPTSFEDEINK 218 (391)
T ss_pred CcChhhhheecCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccCCCCCCCcHHHHHHHHHHhcCchhhcccch
Confidence 999999999999999999999999999999999999999999999998776 3456789999999999876544322
Q ss_pred --hhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccC
Q 018207 173 --EARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYH 250 (359)
Q Consensus 173 --~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~ 250 (359)
.......+.|.+++.+|++.+...+.|.|+|||||-.+||+.++..+.|.+||||||++++.+||||++|+|++|.
T Consensus 219 q~~~~~~~~~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY~afDIgNHFnE~aGv-- 296 (391)
T KOG4720|consen 219 QNLFDEPSPEDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNYQAFDIGNHFNEYAGV-- 296 (391)
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccchhheehhhhHHhhcCC--
Confidence 1123356889999999999998889999999999999999999987889999999999999999999999999873
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcccCCCCCCHHHHHHH
Q 018207 251 TETPHLMDYSKYPDLEERHRFLHAYLSS-TGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQ 329 (359)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~fl~~Y~~~-~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~~~~~~~dy~~y~~~ 329 (359)
-..||+.||+.|++-.||..|++. -|...++.|++.++.+|..|.+.+|++|++||++|++.+.++|||++||-.
T Consensus 297 ----~evDYSlyp~rE~Q~qwl~~YLq~~kg~evs~~eVe~lfvqvn~FalAsHlfWavWAllQA~~StIdFdylgYa~l 372 (391)
T KOG4720|consen 297 ----EEVDYSLYPTREEQLQWLRDYLQAYKGKEVSDTEVETLFVQVNQFALASHLFWAVWALLQAQNSTIDFDYLGYAFL 372 (391)
T ss_pred ----CccchhcCCCHHHHHHHHHHHHhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccchhhHHH
Confidence 157999999999999999999985 466889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCC
Q 018207 330 RFDQYWLTKPELLGSSG 346 (359)
Q Consensus 330 r~~~~~~~~~~~~~~~~ 346 (359)
|+..|.++|..+.++..
T Consensus 373 RyneY~k~k~~~~sl~~ 389 (391)
T KOG4720|consen 373 RYNEYQKRKPEVLSLIE 389 (391)
T ss_pred HHHHhhccCcceeeecc
Confidence 99999999999887653
No 4
>PTZ00296 choline kinase; Provisional
Probab=100.00 E-value=1.3e-56 Score=430.25 Aligned_cols=329 Identities=31% Similarity=0.526 Sum_probs=273.7
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCC----CCCcEEEEEEeCCCcccccchHHHHH
Q 018207 13 SRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTE----TFSHKVLLRVYGEGVEVFFDRNDEIR 88 (359)
Q Consensus 13 ~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~----~~~~~~vlRi~~~~~~~~~dr~~E~~ 88 (359)
...|..+..+|.++.|.|..+ +.+.+.+++++||+||.+|+|+...... ..+++||+|+|+.+++.++||..|..
T Consensus 83 ~~~~~~~~~i~~~~vp~W~~~-~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~ 161 (442)
T PTZ00296 83 LTDPLYIKKICLEKVPEWRRF-TEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFE 161 (442)
T ss_pred cCChHHHHHHHHHHCCccccC-CcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHH
Confidence 346788899999999999876 5567899999999999999998653211 01468999999999999999999999
Q ss_pred HHHHHhcCCCCceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCC----C--CCCcccchHHHHHHH
Q 018207 89 TFEFMSKHGQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDM----P--GQKIVRLWDRSRNWL 162 (359)
Q Consensus 89 ~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~----~--~~~~~~~~~~~~~~~ 162 (359)
+++.|++.|++|++++.+++|+|++||+|++++..++.+++.+.++|+.|++||+++. + ....|.+|..+..|.
T Consensus 162 v~~~ls~~gi~P~l~~~f~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p~~f~~i~~~~ 241 (442)
T PTZ00296 162 VYKTMSKYRIAPQLLNTFSGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWK 241 (442)
T ss_pred HHHHHHHCCCCCceEEEeCCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999998889999999999999999999853 2 123466899999999
Q ss_pred HHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh------cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHH
Q 018207 163 IATKNLSPPEEARAFRLDAIEEEISTLEKALY------RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAY 236 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~------~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~ 236 (359)
..+........ .....+.+.+++.++.+.+. ....+.|+||||+.++|||..+ +.++|||||||++++|+|
T Consensus 242 ~~~~~~~~~~~-~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~~--~~l~LIDfEYAg~ndpaf 318 (442)
T PTZ00296 242 NQLSKYKNIEK-YQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNIINTN--KCLRLIDFEYSGYNFLAT 318 (442)
T ss_pred HHHHhhccchH-hHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCccceeecC--CCEEEEeecccccccHHH
Confidence 87765322110 01134455556666655543 3456899999999999999875 469999999999999999
Q ss_pred hHHHHHHHHhhccCCCCC--CCCCCCCCCCHHHHHHHHHHHhhcC-C---CCCCHHHHHHHHHHhhhhcccchhhHHHHH
Q 018207 237 DIANHFCEMAADYHTETP--HLMDYSKYPDLEERHRFLHAYLSST-G---DQPSDAEVKQLLQDVEKYTLASHLSWGLWG 310 (359)
Q Consensus 237 Dla~~~~e~~~~~~~~~~--~~~~~~~~~~~~~~~~fl~~Y~~~~-~---~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa 310 (359)
|||++++||+++|...++ +.++++.||+.+++..|+++|++.. + ...++++++.++.+|+.|.+++|++|++||
T Consensus 319 DIAn~f~E~~~dy~~~~~p~f~~d~~~yPs~e~q~~Fi~~Yl~~~~~~~~~~~~~~~v~~l~~ev~~f~l~shl~W~lWa 398 (442)
T PTZ00296 319 DIANFFIETTIDYSVSHYPFFAIDKKKYISYENRKLFITAYLSNYLDKSLVVPNPKIIDQILEAVEVQALGAHLLWGFWS 398 (442)
T ss_pred HHHHHHHHHhhhcCCCCCCccccCcccCcCHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999999999999997764 3568889999999999999999853 1 123555789999999999999999999999
Q ss_pred Hhhccc--CCCCCCHHHHHHHHHHHHHhccccccCCC
Q 018207 311 IISEHV--NEIDFDYIGYAKQRFDQYWLTKPELLGSS 345 (359)
Q Consensus 311 ~~~~~~--~~~~~dy~~y~~~r~~~~~~~~~~~~~~~ 345 (359)
++|+.. +.++|||+.||+.||+.|+++|+.+++..
T Consensus 399 iiqa~~~~s~idFDy~~Ya~~R~~~Y~~~k~~~~~~~ 435 (442)
T PTZ00296 399 IIRGYQTKSYNEFDFFLYAKERFKMYDEQKEYLISNN 435 (442)
T ss_pred HHhCCcccCCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999974 56899999999999999999999998753
No 5
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.1e-53 Score=386.30 Aligned_cols=325 Identities=44% Similarity=0.791 Sum_probs=278.8
Q ss_pred HHHHHHHHHhcc-CCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCC---CCCcEEEEEEeCCCcccccchHHHHHHHHH
Q 018207 17 VEAKELLKSLAS-EWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTE---TFSHKVLLRVYGEGVEVFFDRNDEIRTFEF 92 (359)
Q Consensus 17 ~~~~~~l~~~~~-~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~---~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~ 92 (359)
..+..+|.+.++ .|..+. .+..+++.++||.+|.+|.++.+..+. ....++++|||+.+.+ +.+|..|..++..
T Consensus 21 ~~~~~~~~~~l~~~w~~v~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~-~~~~~~Esv~fa~ 98 (366)
T KOG2686|consen 21 PRAKELCAQYLGGAWRDVI-NEEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVD-FSQRETESVMFAI 98 (366)
T ss_pred HHHHHHHHHHhhhHHhhhh-hhhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCcc-HHHhhhHHHHHHH
Confidence 455667776665 599873 356789999999999999998765432 2456899999998765 6788899999999
Q ss_pred HhcCCCCceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcc-cchHHHHHHHHHhhcCCCh
Q 018207 93 MSKHGQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIV-RLWDRSRNWLIATKNLSPP 171 (359)
Q Consensus 93 l~~~gl~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 171 (359)
++++|++|++++.+++|++.+||+.++++..++.+|++...||..++++|...+|..+.+ ..|+.+++|...+.+....
T Consensus 99 lSer~lGPkL~G~F~~GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~ke~~~~~~~~~~wl~~~~~~~~~ 178 (366)
T KOG2686|consen 99 LSERGLGPKLYGFFSGGRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGPKEPRSLWERYKKWLKGAKKIKPT 178 (366)
T ss_pred HhhcCCCcceeeecCCccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCCccHHHHHHHHHHHHhhhhhcCCC
Confidence 999999999999999999999999999999999999999999999999999999988777 7899999999988766532
Q ss_pred hh-----hhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHh
Q 018207 172 EE-----ARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMA 246 (359)
Q Consensus 172 ~~-----~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~ 246 (359)
.. ........+..++..+++..+..+.+.|+||||++.||||+.++++.+++||||||++|+++||||++++||+
T Consensus 179 ~~~~~~~~~~~~~~~l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlanHf~E~~ 258 (366)
T KOG2686|consen 179 EVSYSCGPDKLEIEDLLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLANHFCEWA 258 (366)
T ss_pred ccchhcccchhhHHHHHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHHHHHHHhh
Confidence 21 1112334566667777776644678899999999999999998778899999999999999999999999999
Q ss_pred hccCCCCCCCCC--CCCCCCHHHHHHHHHHHhhcCCC---CCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcccC-CCC
Q 018207 247 ADYHTETPHLMD--YSKYPDLEERHRFLHAYLSSTGD---QPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVN-EID 320 (359)
Q Consensus 247 ~~~~~~~~~~~~--~~~~~~~~~~~~fl~~Y~~~~~~---~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~~~-~~~ 320 (359)
.+|+..+|+.+. -+.+|+.++++.|+.+|+...+. ...+.+++.++++++.|++++|++|+||+++|+..+ .++
T Consensus 259 ~DY~~~~~P~~~~~~~~~p~~e~~~~F~~sYl~~~~~~~~~~~~~ev~~L~~e~~~~~p~shlfW~LWsi~q~~~~~~i~ 338 (366)
T KOG2686|consen 259 ADYHTPTPPGLKINPDLYPGEEQRQRFIESYLDSAAVKRKEPREKEVEKLLKEIRFFTPASHLFWGLWSILQALVLHKIE 338 (366)
T ss_pred ccccCCCCCeeecchhhCCCcHHHHHHHHHHHHHhhccccCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhccccc
Confidence 999999876444 47799999999999999997663 566789999999999999999999999999999988 889
Q ss_pred CCHHHHHHHHHHHHHhccccccC
Q 018207 321 FDYIGYAKQRFDQYWLTKPELLG 343 (359)
Q Consensus 321 ~dy~~y~~~r~~~~~~~~~~~~~ 343 (359)
|||+.||+.|++.||++|.++..
T Consensus 339 fdy~~y~r~rf~~y~~~k~~L~~ 361 (366)
T KOG2686|consen 339 FDYMEYARDRFAVYFHLKPRLGA 361 (366)
T ss_pred cChHHHHHHHHHHHhccchhhcc
Confidence 99999999999999999998853
No 6
>PTZ00384 choline kinase; Provisional
Probab=100.00 E-value=1.9e-51 Score=388.14 Aligned_cols=325 Identities=23% Similarity=0.399 Sum_probs=261.9
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCC--CCCcEEEEEEeCCCcccccchHHHHHHH
Q 018207 13 SRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTE--TFSHKVLLRVYGEGVEVFFDRNDEIRTF 90 (359)
Q Consensus 13 ~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~--~~~~~~vlRi~~~~~~~~~dr~~E~~~l 90 (359)
+.....++++|.++.|.|..+ +.+.+++++++||+||.+|+|+.....+ ...+.+++|+++..+..++||++|.+++
T Consensus 28 ~~~~~~~~~~~~~~~p~w~~~-~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~ 106 (383)
T PTZ00384 28 DHSHSNLKSLCIRHVPFWNNV-NPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIA 106 (383)
T ss_pred cccHHHHHHHHHHHCCccccC-CcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHH
Confidence 346689999999999999876 5678999999999999999998643210 0113488899988888899999999999
Q ss_pred HHHhcCCCCceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCC---CC--CcccchHHHHHHHHHh
Q 018207 91 EFMSKHGQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMP---GQ--KIVRLWDRSRNWLIAT 165 (359)
Q Consensus 91 ~~l~~~gl~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~---~~--~~~~~~~~~~~~~~~~ 165 (359)
+.|++.|++|++++.+++|+|++||+|++++..++.++.....+|+.|++||+...+ .. ..|..+..+..|...+
T Consensus 107 ~~Ls~~glgP~l~~~f~~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~~~p~~~~~~p~~~~~i~~w~~~~ 186 (383)
T PTZ00384 107 KLLGDNNFGPKIIGRFGDFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTELVPKEWDRTPMFLTKISTWSQHV 186 (383)
T ss_pred HHHHhCCCCCeEEEecCCEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhcccccCCCccccCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999988899999999999999999997532 11 2355577788888765
Q ss_pred hcCCChhhhhhcCHHHHHHHHHHHHHHHhc-------CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhH
Q 018207 166 KNLSPPEEARAFRLDAIEEEISTLEKALYR-------NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDI 238 (359)
Q Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~-------~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dl 238 (359)
.+..... ...++...+.+++..+++.+.. ...+.|+||+|++++|||.++ +.+.|||||||++++|+|||
T Consensus 187 ~~~~~~~-~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~~--~~l~lID~EYA~~n~~~fDL 263 (383)
T PTZ00384 187 ERIIKKY-NLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDFN--QGIYFIDFDFAGFNYVGWEI 263 (383)
T ss_pred HHHHHhh-ccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEecC--CCEEEEEeccccCCchHhHH
Confidence 4321110 0123445566666665544421 235689999999999999875 47999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCC--CCCCCCCCHHHHHHHHHHHhhcC-CC--CCCHHHHHHHHHHhhhhcccchhhHHHHHHhh
Q 018207 239 ANHFCEMAADYHTETPHL--MDYSKYPDLEERHRFLHAYLSST-GD--QPSDAEVKQLLQDVEKYTLASHLSWGLWGIIS 313 (359)
Q Consensus 239 a~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~fl~~Y~~~~-~~--~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~ 313 (359)
|++|+||+++|...+++. .+.+.+|+.+++..|++.|+... |. ..++++++.|+.+|..|++++|++|++||++|
T Consensus 264 An~f~E~~~~y~~~~~~~~~~~~~~~ps~e~~~~fi~~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~l~sh~~W~lW~iIq 343 (383)
T PTZ00384 264 ANFFVKLYIVYDPPTPPYFNSDDSLALSEEMKTIFVSVYLSQLLGKNVLPSDDLVKEFLQSLEIHTLGVNLFWTYWGIVM 343 (383)
T ss_pred HHHHHHHhcccCCCCCCccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999876543 45677888999999999999853 22 24578899999999999999999999999999
Q ss_pred ccc----CCCCCCHHHHHHHHHHHHHhccccc
Q 018207 314 EHV----NEIDFDYIGYAKQRFDQYWLTKPEL 341 (359)
Q Consensus 314 ~~~----~~~~~dy~~y~~~r~~~~~~~~~~~ 341 (359)
+.. +..++||++||..|+++|.+-.+.+
T Consensus 344 ~~~~~~~~~~~~~f~~y~~~r~~~~~~~~~~~ 375 (383)
T PTZ00384 344 NDKPKNELSKPVKFEAYAKFQYNLFKNNLRKL 375 (383)
T ss_pred CCCCcccccCCchHHHHHHHHHHHHHHHHHHh
Confidence 873 2336789999999999998876655
No 7
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=100.00 E-value=3.6e-43 Score=325.73 Aligned_cols=274 Identities=41% Similarity=0.707 Sum_probs=212.7
Q ss_pred EEEEecCCcceeEEEEEeCCCC--CCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCCceEEEeecC
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKT--ETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINA 117 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~--~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G 117 (359)
++++++||.||.+|+|+..... ...++++|+|+++......++|..|..+++.|++.|++|++++.+++|+|++|++|
T Consensus 2 ~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~~~v~e~i~G 81 (302)
T cd05156 2 EVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPNGRIEEFIPS 81 (302)
T ss_pred eEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCCCchhheeCC
Confidence 6889999999999999854200 01247999999988776778999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCC-C----CcccchHHHHHHHHHhhcCCChh-----hhhhcCHHHHHHHHH
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPG-Q----KIVRLWDRSRNWLIATKNLSPPE-----EARAFRLDAIEEEIS 187 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~ 187 (359)
+++....+.++..+.++|+.|++||++..+. . ..+..+..+..|........... .........+...+.
T Consensus 82 ~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T cd05156 82 RTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDEA 161 (302)
T ss_pred CcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHHH
Confidence 9887666778889999999999999987653 1 22445666777776554322110 000001122233333
Q ss_pred HHHHHHhc-----CCCceeEEeccCCCCCeeEeCC---CCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCC--CC
Q 018207 188 TLEKALYR-----NDQHIGFCHNDLQYGNIMIDEV---TKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPH--LM 257 (359)
Q Consensus 188 ~l~~~l~~-----~~~~~vl~HgDl~~~Nil~~~~---~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~--~~ 257 (359)
.+.+.+.. ...+.|+||||++++|||++++ .+.++|||||||++|+|+||||+++++++.+|...+|+ ..
T Consensus 162 ~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~~~e~~~~~~~~~~~~~~~ 241 (302)
T cd05156 162 KYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANHFCEWMYDYHDPEPPFFKI 241 (302)
T ss_pred HHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHHHHHHHhhcCCCCCCcccc
Confidence 33333322 2478899999999999999873 25799999999999999999999999999888766432 45
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCC-----CCCCHHHHHHHHHHhhhhcccchhhHHHHHHhh
Q 018207 258 DYSKYPDLEERHRFLHAYLSSTG-----DQPSDAEVKQLLQDVEKYTLASHLSWGLWGIIS 313 (359)
Q Consensus 258 ~~~~~~~~~~~~~fl~~Y~~~~~-----~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~ 313 (359)
+++.+|+.+++..|++.|++..+ ...+..+++.++.+|..|.+++|++|++||++|
T Consensus 242 ~~~~~p~~~~~~~f~~~Yl~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~W~lW~~~q 302 (302)
T cd05156 242 HEDKYPTEEQRLNFISAYLSESLKGKNSVEEREKEVKDLLEEVEIFTPASHLFWALWGIIQ 302 (302)
T ss_pred ChhhCcCHHHHHHHHhccCchhcccccccCcHHHHHHHHHHHHHHHHhhhhHHHHHHHhcC
Confidence 67788888999999999998643 234567889999999999999999999999987
No 8
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=100.00 E-value=4.4e-36 Score=271.75 Aligned_cols=251 Identities=17% Similarity=0.214 Sum_probs=193.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-cchHHHHHHHHHHhcCCCCceeEEEeCCceEEEeecCCCC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-FDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINARTL 120 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~~l 120 (359)
++++||.+|.+|+++.. ++++|+|+++.....+ ++|+.|..+++.+++.|++|++++.+++++|++||+|+++
T Consensus 2 ~~~~~G~tn~~y~~~~~------~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~~~~v~e~i~G~~~ 75 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEHP------GISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNEHWLLVEWLEGEVI 75 (256)
T ss_pred CcCCCcCcCCeEEEEeC------CccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeCCEEEEEeccCccc
Confidence 46789999999999842 6799999987665444 7899999999999999999999999999999999999998
Q ss_pred CCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCce
Q 018207 121 SASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHI 200 (359)
Q Consensus 121 ~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 200 (359)
+..++.++....++|+.|++||+++.+..+ .+++..+..|...+..... ...+...+..+.......+.+.
T Consensus 76 ~~~~~~~~~~~~~la~~l~~lH~~~~~~~~-~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 146 (256)
T TIGR02721 76 TLDQFVALDLLLELAALLHQLHSQPRFGYP-LSLKARIAHYWLQIDPARR--------TPEWLRLYKQFRSAPEPAPLPL 146 (256)
T ss_pred ccccccCchhHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHhcccccC--------ChHHHHHHHHHHhccCCCCCCC
Confidence 876666778899999999999998865432 2445566666655432110 1123333333333222235678
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTG 280 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~ 280 (359)
++||||++++|||++++ ++.|||||+|++|+|++|||.++.++ + .++++.|++.|.+..+
T Consensus 147 ~l~H~Dl~~~Nil~~~~--~~~lIDwE~a~~gdp~~DLa~~~~~~------------~------~~~~~~~l~~Y~~~~~ 206 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQ--GLKLIDWEYASDGDIALELAAIIRAN------------D------EEQQQDFVQRYCQRRR 206 (256)
T ss_pred eeecCCCCcCcEEEeCC--CCEEEeccccCcCCHHHHHHHHHHhC------------C------HHHHHHHHHHHHHhhC
Confidence 99999999999999985 48999999999999999999998642 2 7889999999998643
Q ss_pred CCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 018207 281 DQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFD 332 (359)
Q Consensus 281 ~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~~~~~~~dy~~y~~~r~~ 332 (359)
.. ....+..+++.|.++++++|++|+.++..+.+ +-.|..-|+....
T Consensus 207 ~~----~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~a~~~~~ 253 (256)
T TIGR02721 207 IY----SISVLWRQVKAWQPWVDYMAALWFELRWQQTG-DPQFLELAQELRH 253 (256)
T ss_pred Cc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHH
Confidence 21 12567889999999999999999999887765 3457766666554
No 9
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=100.00 E-value=1.4e-35 Score=265.02 Aligned_cols=224 Identities=38% Similarity=0.651 Sum_probs=178.3
Q ss_pred eEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCCceEEEeecCC
Q 018207 39 LQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINAR 118 (359)
Q Consensus 39 ~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~ 118 (359)
++++++.||.||.+|+|+..+. .+++||+|+++..+...++|++|..+++.|++.|++|++++..++++|+||++|+
T Consensus 1 ~~i~~l~gG~tN~~~~v~~~~~---~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~~~l~e~i~G~ 77 (235)
T cd05157 1 ITFKRFTGGITNKLVKVSNKED---NQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQNGLIYEFIPGR 77 (235)
T ss_pred CeEEEcCCcccceEEEEEcCCC---CCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeCCcEEEEeeCCC
Confidence 3689999999999999975310 1479999999877767789999999999999999999999888889999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCC------CcccchHHHHHHHHHhhcCCChhh-----hhhcCHHHHHHHHH
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQ------KIVRLWDRSRNWLIATKNLSPPEE-----ARAFRLDAIEEEIS 187 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~ 187 (359)
+++..++.++....++|+.|++||+...+.. ..+..++.+..|...+........ ......+.+.+.+.
T Consensus 78 ~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 157 (235)
T cd05157 78 TLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEIS 157 (235)
T ss_pred cCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHH
Confidence 9987778788899999999999999876542 234567778888776543211100 01123456666777
Q ss_pred HHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHH
Q 018207 188 TLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEE 267 (359)
Q Consensus 188 ~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 267 (359)
.+.+.+.....+.++||||++++|||++++++.+.|||||+|++|+|++|||.++++|++ +..|...||+.++
T Consensus 158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~~e~~~-------~~~~~~~~~~~~~ 230 (235)
T cd05157 158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHFNEWAG-------FDCDYYLYPPKEE 230 (235)
T ss_pred HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHHHHHHcC-------ccCChhhCcCHHH
Confidence 777766555678899999999999999973257999999999999999999999999974 3566677887788
Q ss_pred HHHHH
Q 018207 268 RHRFL 272 (359)
Q Consensus 268 ~~~fl 272 (359)
++.|+
T Consensus 231 ~~~~~ 235 (235)
T cd05157 231 QQAFI 235 (235)
T ss_pred HHhhC
Confidence 87774
No 10
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=100.00 E-value=2.2e-35 Score=259.47 Aligned_cols=202 Identities=43% Similarity=0.731 Sum_probs=153.2
Q ss_pred CcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccC
Q 018207 65 SHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDL 144 (359)
Q Consensus 65 ~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~ 144 (359)
++++|||+++.+++.++||+.|..+++.|++.|++|++++.+++|+|++||+|++++..++.++.++..+|+.|++||++
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~lH~~ 81 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLGPKIIYFFENGRVEEFIEGRTLSPEDFRNPEILKRIAKLLAKLHSI 81 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSSS-EEEEETTEEEEE--SSEE--CGGGGSHHHHHHHHHHHHHHHTH
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCCCeEEEEcCCCcEEEEecccccChhhccChHHHHHHHHHHHHHhhc
Confidence 58999999999988999999999999999999999999999999999999999999988899999999999999999998
Q ss_pred CC-CCCCcccchHHHHHHHHHhhcCC-C----hhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCC
Q 018207 145 DM-PGQKIVRLWDRSRNWLIATKNLS-P----PEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVT 218 (359)
Q Consensus 145 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~ 218 (359)
+. +....+.+++.+..|........ . ........+..+.+++..+++.+.....+.|+||||++++|||++..+
T Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~~~~~ 161 (211)
T PF01633_consen 82 PISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILINNKD 161 (211)
T ss_dssp HHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEETSSS
T ss_pred ccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEeccCC
Confidence 87 44455678888998832221111 1 011122345667888888888887778889999999999999993333
Q ss_pred CceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCC-CCCCCCCCCCHH
Q 018207 219 KSITLIDYEYASYNPVAYDIANHFCEMAADYHTETP-HLMDYSKYPDLE 266 (359)
Q Consensus 219 ~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~-~~~~~~~~~~~~ 266 (359)
+.+.|||||||++++|+||||+++++++.++...++ +.++++.||+.+
T Consensus 162 ~~~~lIDfEya~~n~~~fDia~~f~e~~~~~~~~~~~~~~~~~~yp~~~ 210 (211)
T PF01633_consen 162 GEVKLIDFEYAGYNDRAFDIANFFCEWNFDYEQEEFFFKCDYSKYPTEE 210 (211)
T ss_dssp SCEEE--GTT-EEEEHHHHHHHHHHHTTEETTHSSTSTEE-GGGS--HH
T ss_pred CeEEEecHHHHhhccchhhHHHHHHHHcCchhhhhhhhhhhHhhCCCcc
Confidence 789999999999999999999999999998776554 566777888544
No 11
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.95 E-value=3.2e-26 Score=211.64 Aligned_cols=259 Identities=17% Similarity=0.171 Sum_probs=169.0
Q ss_pred HHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcC
Q 018207 17 VEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKH 96 (359)
Q Consensus 17 ~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~ 96 (359)
+++.+++.+... .+..+++++.+|.+|.+|++.+. ++++|+|+++... ......|..+++.|.+.
T Consensus 2 ~~l~~~l~~y~~-------~~~~~i~~i~~G~~n~~y~v~~~------~~~~vLr~~~~~~--~~~~~~e~~~l~~L~~~ 66 (296)
T cd05153 2 EELASFLADYDL-------GELLSFEGISAGIENTNYFVTTD------SGRYVLTLFEKVS--AEELPFFLALLDHLAER 66 (296)
T ss_pred HHHHHHHHHcCC-------CchhheecccCccccceEEEEeC------CCcEEEEEcCCCC--hHhccHHHHHHHHHHHC
Confidence 345556665431 24467899999999999999753 4689999987522 12345799999999999
Q ss_pred CC-CceeEEEeCC----------ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHh
Q 018207 97 GQ-GPRLLGRFHN----------GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIAT 165 (359)
Q Consensus 97 gl-~P~~~~~~~~----------g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
|+ +|+++....+ +.|++|++|+++.. .++....++|+.|++||........... ......|....
T Consensus 67 g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~---~~~~~~~~lg~~La~lH~~~~~~~~~~~-~~~~~~~~~~~ 142 (296)
T cd05153 67 GLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHLTR---PTAAHCRQIGEALARLHLAAQSFPGERN-NLRGLAWIREL 142 (296)
T ss_pred CCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHhccCCccCC-CcCCcHHHHHH
Confidence 97 6887764322 27999999998764 3567889999999999987543221100 01112333322
Q ss_pred hcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHH
Q 018207 166 KNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEM 245 (359)
Q Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~ 245 (359)
.....+. ........+...+..+.+. .....+.++||||++|+|||++++ +.+.|||||+|++|++++|||.++..+
T Consensus 143 ~~~~~~~-l~~~~~~~~~~~~~~l~~~-~~~~~~~~l~HgD~~~~Nil~~~~-~~~~iIDfe~a~~g~~~~Dla~~~~~~ 219 (296)
T cd05153 143 GKDLLPL-LSAEDRALLADELARQDAF-DPSDLPRGVIHADLFRDNVLFDGD-ELSGVIDFYFACTDAFLYDLAITLNDW 219 (296)
T ss_pred HHHhccc-cCHHHHHHHHHHHHHHHhh-hhhcCCCcCCccCcCcccEEEeCC-ceEEEeehhhhcCchHHHHHHHHHHHH
Confidence 1111100 0000122334444444443 123567799999999999999985 455799999999999999999998776
Q ss_pred hhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhh
Q 018207 246 AADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIIS 313 (359)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~ 313 (359)
+... + ..++ .+..+.|+++|.+.. ++++.|++.|.. +..+..+.+.+|.+..
T Consensus 220 ~~~~--------~-~~~~-~~~~~~~l~gY~~~~--~ls~~e~~~l~~----~~~~~a~~~~~~~~~~ 271 (296)
T cd05153 220 CFDE--------D-GALD-PERAQALLAGYQAVR--PLTEAERAALPI----MLRGAALRFWLSRLYD 271 (296)
T ss_pred HhCc--------c-CCCC-HHHHHHHHHHHHhcC--CCCHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 5421 1 1122 778999999998764 477778776654 4444445545555543
No 12
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.95 E-value=5.2e-26 Score=192.59 Aligned_cols=164 Identities=33% Similarity=0.586 Sum_probs=138.9
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--CceEEEeecC
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--NGRVEEFINA 117 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~g~v~e~i~G 117 (359)
.++++++|.+|.+|+++.. ++++++|++........+++.|..+++.+++.+++|+++..+. +++||||++|
T Consensus 2 ~~~~l~~G~~~~vy~~~~~------~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G 75 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVA------NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEG 75 (170)
T ss_pred ceeecCCcccCceEEEEEC------CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCC
Confidence 5789999999999999853 6899999987654444677899999999999999999998876 5699999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
+++.......+..+.++++.|++||+...+
T Consensus 76 ~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~-------------------------------------------------- 105 (170)
T cd05151 76 SELLTEDFSDPENLEKIAKLLKKLHSSPLP-------------------------------------------------- 105 (170)
T ss_pred CccccccccCHHHHHHHHHHHHHHhCCCCC--------------------------------------------------
Confidence 988654455667889999999999997542
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhh
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLS 277 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~ 277 (359)
+.++||||++++|||+++ +.+++||||++++++|++|||.++.++. +. .+++..|++.|.+
T Consensus 106 -~~~~~HgD~~~~Nil~~~--~~~~liDf~~a~~~~~~~Dla~~~~~~~----------~~------~~~~~~~~~~y~~ 166 (170)
T cd05151 106 -DLVPCHNDLLPGNFLLDD--GRLWLIDWEYAGMNDPLFDLANFFSEAK----------LS------EDQEEELLEAYFG 166 (170)
T ss_pred -CceeecCCCCcCcEEEEC--CeEEEEecccccCCChHHHHHHHHHhcC----------CC------HHHHHHHHHHHhC
Confidence 669999999999999994 5799999999999999999999987642 22 7889999999976
Q ss_pred c
Q 018207 278 S 278 (359)
Q Consensus 278 ~ 278 (359)
.
T Consensus 167 ~ 167 (170)
T cd05151 167 R 167 (170)
T ss_pred C
Confidence 4
No 13
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.94 E-value=1.3e-25 Score=198.76 Aligned_cols=197 Identities=17% Similarity=0.212 Sum_probs=136.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC-CceeEEEeCC----ceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ-GPRLLGRFHN----GRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl-~P~~~~~~~~----g~v~e~i 115 (359)
.+++++|.||.+|+.. ++++|+|++..... ..+..+|.++++.+...|+ +|+++...+. |+||+||
T Consensus 6 ~~~i~~G~t~~~y~~~--------~~~~VlR~~~~~~~-~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i 76 (226)
T TIGR02172 6 WTQTGEGGNGESYTHK--------TGKWMLKLYNPGFD-KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELI 76 (226)
T ss_pred heeecCCCCcceeEec--------CCCEEEEeCCCCCC-HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeec
Confidence 4778999999999852 56899999876432 1234689999999999999 7999988643 6999999
Q ss_pred cCCC-CCC----CCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 116 NART-LSA----SDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 116 ~G~~-l~~----~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
+|++ +.. .....+.+...+|+.+++||+++.+....+.....+..+++.... .+ ..+.+. +.
T Consensus 77 ~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~--~~--------~~~~~~---l~ 143 (226)
T TIGR02172 77 VGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDF--VP--------KDYKEK---AR 143 (226)
T ss_pred CCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccC--CC--------HHHHHH---HH
Confidence 9975 221 111123577899999999999876543323333333333321110 01 112222 22
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHH
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHR 270 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (359)
+.+...+.+.++||||+||+|||++++ + +.|||||++++|||.+|||.++.-+ .++ ..++..
T Consensus 144 ~~l~~~~~~~~~~HgD~~~~Nii~~~~-~-~~iIDwe~a~~Gdp~~Dla~~~~~~---------------~~~-~~~~~~ 205 (226)
T TIGR02172 144 AFIKEVPDTSTCLHGDFQIGNLITSGK-G-TYWIDLGDFGYGNPLFDLGLLFMFC---------------HYL-DDDKLQ 205 (226)
T ss_pred HHHHhCCCCCceEecCCCCCcEEEcCC-C-cEEEechhcCcCCHHHHHHHHHHhc---------------cCC-hhHHHH
Confidence 222233455678999999999999985 4 8999999999999999999986532 122 678889
Q ss_pred HHHHHhh
Q 018207 271 FLHAYLS 277 (359)
Q Consensus 271 fl~~Y~~ 277 (359)
|+..|+.
T Consensus 206 ~~~~y~~ 212 (226)
T TIGR02172 206 AIFHMNA 212 (226)
T ss_pred HHHhcCH
Confidence 9999975
No 14
>PRK05231 homoserine kinase; Provisional
Probab=99.92 E-value=2.7e-23 Score=194.14 Aligned_cols=242 Identities=17% Similarity=0.162 Sum_probs=159.4
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHh
Q 018207 15 IPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMS 94 (359)
Q Consensus 15 ~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~ 94 (359)
+++++..+++.+- . .+..+++++.+|..|.+|++++. ++++|||++..... .....|..+++.|.
T Consensus 8 s~~~l~~~l~~y~--~-----~~~~~~~~l~~G~~n~~y~v~t~------~g~~vLK~~~~~~~--~~l~~~~~~l~~L~ 72 (319)
T PRK05231 8 SDDELAAFLAPYD--L-----GELLSLKGIAEGIENSNFFLTTT------QGEYVLTLFERLTA--EDLPFFLGLMQHLA 72 (319)
T ss_pred CHHHHHHHHHhcC--C-----chhhccchhccccccceEEEEeC------CCcEEEEEeccCCh--HHhHHHHHHHHHHH
Confidence 4577777775541 1 13457888999999999999863 46899999862111 12246889999999
Q ss_pred cCCC-CceeEEEeC-------C---ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCC-cccchHHHHHHH
Q 018207 95 KHGQ-GPRLLGRFH-------N---GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQK-IVRLWDRSRNWL 162 (359)
Q Consensus 95 ~~gl-~P~~~~~~~-------~---g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~-~~~~~~~~~~~~ 162 (359)
+.|+ +|+++...+ + ..+++|++|+.+.. .++...+++|+.||+||........ .+.. ..+..|.
T Consensus 73 ~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~---~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~-~~~~~~~ 148 (319)
T PRK05231 73 ARGVPVPAPVARRDGAALGELAGKPAAIVTFLEGKWPRA---PTAAHCAEVGEMLARMHLAGRDFPLERPNL-RGLAWWR 148 (319)
T ss_pred HCCCCCCcceeCCCCCEeeeeCCEEEEEEEecCCCCCCC---CCHHHHHHHHHHHHHHHhhhhcCCccCCCC-CChHHHH
Confidence 9998 688875422 1 27999999987643 2456789999999999987543221 1111 1222333
Q ss_pred HHhhcC---CChhhhhhcCHHHHHHHHHHHHHHHhc---CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHH
Q 018207 163 IATKNL---SPPEEARAFRLDAIEEEISTLEKALYR---NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAY 236 (359)
Q Consensus 163 ~~~~~~---~~~~~~~~~~~~~l~~~~~~l~~~l~~---~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~ 236 (359)
....+. ..+. ....+.+.++.+.+.+.. ...|.++||||++++|||++++ +...||||++|++|++++
T Consensus 149 ~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~-~~~~iIDf~~~~~~~~~~ 222 (319)
T PRK05231 149 ELAPRLLPFLADE-----QAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGD-RLSGFIDFYFACNDKLLY 222 (319)
T ss_pred HHHHHHhhccChh-----HHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECC-ceEEEEecccccCCchHH
Confidence 322221 1111 011233333333333321 2367799999999999999864 444799999999999999
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Q 018207 237 DIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQ 293 (359)
Q Consensus 237 Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~ 293 (359)
|||.++..|+.... ..+. .+....|+++|.+.+ ++++.|++.|..
T Consensus 223 DlA~~~~~~~~~~~---------~~~~-~~~~~~~l~gY~~~~--~Ls~~E~~~l~~ 267 (319)
T PRK05231 223 DVAITLNDWCFEAD---------GSLD-ATKARALLAAYQSVR--PLTAAERAALPV 267 (319)
T ss_pred HHHHHHHHHHccCC---------CCcC-HHHHHHHHHHHhhcC--CCCHHHHHHHHH
Confidence 99999877764210 1122 678899999998764 578888776654
No 15
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.92 E-value=8.4e-24 Score=186.64 Aligned_cols=194 Identities=19% Similarity=0.247 Sum_probs=140.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCC-CceeEEEeCC-------c
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQ-GPRLLGRFHN-------G 109 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl-~P~~~~~~~~-------g 109 (359)
+++++++|.+|.+|+++.. ++.++|+|++..... ...+...|.++++.+.+.|+ +|+++....+ +
T Consensus 2 ~~~~l~~G~~n~~~~v~~~-----~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~ 76 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAG-----GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPF 76 (223)
T ss_pred cceecCCCccceEEEEEec-----CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCce
Confidence 5688999999999999864 147999999876532 23456789999999999887 8998887643 4
Q ss_pred eEEEeecCCCCCCCCC---CC----hHHHHHHHHHHHhhccCCCCCCCc-------ccchHHHHHHHHHhhcCCChhhhh
Q 018207 110 RVEEFINARTLSASDI---RD----PEISALIAAKLKEFHDLDMPGQKI-------VRLWDRSRNWLIATKNLSPPEEAR 175 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l---~~----~~~~~~la~~La~lH~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 175 (359)
+|++|++|.++..... .+ ..++.++|+.|++||+++.+.... ......+..|...+......
T Consensus 77 ~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 152 (223)
T cd05154 77 YVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTD---- 152 (223)
T ss_pred EEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccc----
Confidence 8999999988765432 22 256789999999999987542211 12345566666655432211
Q ss_pred hcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCC-CCceEEEEEeeccCCchHHhHHHHHHHH
Q 018207 176 AFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEV-TKSITLIDYEYASYNPVAYDIANHFCEM 245 (359)
Q Consensus 176 ~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~-~~~v~lIDwE~a~~~~~~~Dla~~~~e~ 245 (359)
....+.....++.+.+. ...+.++||||++++|||++++ ++.+.|||||++++|+|++|||.++..|
T Consensus 153 --~~~~~~~~~~~~~~~~~-~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~~~~~ 220 (223)
T cd05154 153 --EPPAMERLLRWLEAHLP-ADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWLLMYW 220 (223)
T ss_pred --ccHHHHHHHHHHHhhCC-CCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHHHHhc
Confidence 11234444455554442 2367899999999999999883 2557899999999999999999998765
No 16
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.92 E-value=4.6e-23 Score=191.51 Aligned_cols=250 Identities=16% Similarity=0.174 Sum_probs=162.9
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHH
Q 018207 13 SRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEF 92 (359)
Q Consensus 13 ~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~ 92 (359)
+..++.+..++++.- . .+..+++++.+|.+|.+|++++. ++++|+|++..... ......|.++++.
T Consensus 6 ~~~~~~l~~~l~~y~--~-----~~~~~i~~~~~G~~n~~y~v~t~------~~~~vLK~~~~~~~-~~~i~~e~~~l~~ 71 (307)
T TIGR00938 6 SVSDEEMSSFLDGYD--L-----GELLSLKGIAEGVENSNYLLTTD------VGRYILTLYEKRVK-AEELPFFLALTTH 71 (307)
T ss_pred cCCHHHHHHHHHhcC--C-----CCceeccccCCccccceEEEEeC------CCcEEEEEecCCCC-HHHHHHHHHHHHH
Confidence 345577777777651 1 24567899999999999999753 46899999865321 1122468899999
Q ss_pred HhcCCC-CceeEEEeCC-------c---eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHH
Q 018207 93 MSKHGQ-GPRLLGRFHN-------G---RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNW 161 (359)
Q Consensus 93 l~~~gl-~P~~~~~~~~-------g---~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~ 161 (359)
|.+.|+ +|+++....+ | .+++||+|+++.. .++....++|+.||+||..................|
T Consensus 72 L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~---~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w 148 (307)
T TIGR00938 72 LAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGR---PTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAW 148 (307)
T ss_pred HHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHH
Confidence 999998 6888765332 2 6899999988753 245678999999999998754321111100123344
Q ss_pred HHHhhcCCCh-hhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHH
Q 018207 162 LIATKNLSPP-EEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIAN 240 (359)
Q Consensus 162 ~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~ 240 (359)
.......... ..........+.+.++.+.... ....+.++||||++++||+++++ +.+.|||||++++|++.+|||.
T Consensus 149 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~-~~~~~~~l~HgD~~~~Nvl~~~~-~~~~vIDfd~~~~~~~~~DLA~ 226 (307)
T TIGR00938 149 HILAEKCFEAAPQLEAHMGAELDKELDYLDKFW-PRDLPRGVIHADLFPDNVLFDGD-SVKGVIDFYFACTDARAYDLAI 226 (307)
T ss_pred HHHHHhhhhcccccCHHHHHHHHHHHHHHHhhh-hhcCCCccCCCCCCcCcEEEECC-ceEEEeecccccCcchHHHHHH
Confidence 4322211000 0000001122333444443322 23567899999999999999985 4457999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Q 018207 241 HFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQ 293 (359)
Q Consensus 241 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~ 293 (359)
++..|+.. ....+. .+..+.|+++|.+.. ++++.|++.|..
T Consensus 227 ~~~~~~~~---------~~~~~~-~~~~~~~l~gY~~~~--~Ls~~e~~~l~~ 267 (307)
T TIGR00938 227 TVNAWCFD---------ADDHFD-ADHAKALIKGYHQSR--PLTEEEKAAFPV 267 (307)
T ss_pred HHHHHHcC---------CCCCCC-HHHHHHHHHHHHhcC--CCCHHHHHHHHH
Confidence 87655431 001122 678899999998764 678777766554
No 17
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.92 E-value=8.9e-24 Score=190.97 Aligned_cols=246 Identities=24% Similarity=0.335 Sum_probs=160.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEE-EeCCCcccccchHHHHHHHHHHhcCCCCceeEE----EeCCceEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLR-VYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLG----RFHNGRVEEF 114 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlR-i~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~----~~~~g~v~e~ 114 (359)
.+.++. |.||.+|++.. .|.+.+++ .+.+....+..+ .+. |+++. ...+.++.++
T Consensus 10 ~~~~~~-g~t~~~~~~~~------~g~~~~~~r~~~p~~~~~~~~------------~~~-~~l~~~~~~~~~~~~~~q~ 69 (269)
T COG0510 10 KITPLN-GLTGYAFRIEG------EGTRVFLKRNFEPFLPALIFR------------LIV-PKLLWLKRIANGGVLVAQY 69 (269)
T ss_pred eeeecc-CCcceeEEeeC------CCCeeeeecCCCcchHHHHHH------------hhh-hhhhhhcccccCCceEEee
Confidence 556665 78999999953 24555554 444333222221 111 33222 2234477777
Q ss_pred ec-CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcc---cchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 115 IN-ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIV---RLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 115 i~-G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
+. |+.++.++. ...+++..|++||.........+ ..+..+..+++.+...... .......+.+.+..++
T Consensus 70 ~~~~~~l~~~~~----~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~ 142 (269)
T COG0510 70 WENGRTLTPEDM----NLKKIAHILKKLHNSVPLLHQLPRSGSSFIEPKDYLELLWQQNSR---AYRDNHLLRKKLKELR 142 (269)
T ss_pred eccccccCcccc----chHHHHHHHHHhcCccchHHHHHhhcchHhhHHHHHHHHHhhchH---HhhhhHHHHHHHHHHH
Confidence 64 677776532 36889999999999544322111 1223444455544433211 1123456777788888
Q ss_pred HHHhcCCCc-eeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHH
Q 018207 191 KALYRNDQH-IGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERH 269 (359)
Q Consensus 191 ~~l~~~~~~-~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (359)
..+.....+ .|+||||++|+|+|.++. ++++|||||||++|||+||||.++.++.. + ..+..
T Consensus 143 ~~l~~~~~~~~v~cH~Dl~~~N~l~t~~-~~l~LIDWEyAg~~D~~~DLA~~~~e~~~----------~------~~~~~ 205 (269)
T COG0510 143 RALEEVPKDDLVPCHNDLNPGNLLLTDK-GGLFLIDWEYAGLNDPAFDLAALLSEYIF----------N------HNELE 205 (269)
T ss_pred HHhhhcCCCceeeecCCCCccceEEcCC-CcEEEEecccCCCccHHHHHHHHHHHhcc----------c------hhHHH
Confidence 877766666 899999999999999985 78999999999999999999999998753 2 23344
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcccCCCCCCHHHHHHHHHHHHHhccccccC
Q 018207 270 RFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELLG 343 (359)
Q Consensus 270 ~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~~~~~~~dy~~y~~~r~~~~~~~~~~~~~ 343 (359)
.....|++.++... |..+.++..+.|.+|+..|.... .++..|+..|+.+..+..+.+..
T Consensus 206 ~~~~~~~~~~~~~~-----------~~~~~i~~~~~W~l~~~~~~~~~---~~~~~~~~k~~~~~~~~l~~~~~ 265 (269)
T COG0510 206 DLYSAYLEKYGFEA-----------VLIYKILQKFLWYLWTKLQEQIL---EDFGWYDKKRLNRAIDLLENLRK 265 (269)
T ss_pred HHHHHHHHhCCchh-----------hHHHHHHHHhHHHHHHHHHHHhh---hhhhhhhHHHHHHHHHHHHHHHH
Confidence 55666666543211 34577888999999999998755 46777888888777666555543
No 18
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.91 E-value=1.2e-22 Score=182.53 Aligned_cols=214 Identities=16% Similarity=0.126 Sum_probs=139.7
Q ss_pred EEEecCCcc-eeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC----CceEEEee
Q 018207 41 VIPVKGAMT-NEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH----NGRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~-N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~----~g~v~e~i 115 (359)
+++|++|.+ |.+|+++.. +.++++|+..... ..+..+|+++++.|++.+.+|+++.... .++||+++
T Consensus 3 ~~~~~~g~~~~~v~~~~~~------~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i 74 (244)
T cd05150 3 WERVTEGQSGATVYRLDGK------NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAV 74 (244)
T ss_pred ceecCCCCCcCeEEEEcCC------CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEee
Confidence 456666555 899999742 4789999976442 2345689999999998877999998764 25899999
Q ss_pred cCCCCCCCC--CCChHHHHHHHHHHHhhccCCCCCCCccc-chHHHHHHHHHhhcCC-Chhhhhh-cCHHHHHHHHHHHH
Q 018207 116 NARTLSASD--IRDPEISALIAAKLKEFHDLDMPGQKIVR-LWDRSRNWLIATKNLS-PPEEARA-FRLDAIEEEISTLE 190 (359)
Q Consensus 116 ~G~~l~~~~--l~~~~~~~~la~~La~lH~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~l~~~~~~l~ 190 (359)
+|+++.... ...+.+..++|+.|++||+++.+..+... ....+..+...+.... ....... .......+....+.
T Consensus 75 ~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 154 (244)
T cd05150 75 PGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELE 154 (244)
T ss_pred CCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHH
Confidence 999886433 23346789999999999998764322111 1122222222222111 0000000 00011233334444
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHH
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHR 270 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (359)
.... ...+.|+||||++++|||++++ +.+.|||||+|++|||++|||.++..... ...+.+.++.
T Consensus 155 ~~~~-~~~~~~l~HgD~~~~Nil~~~~-~~~~iIDwe~a~~gdp~~Dla~~~~~~~~-------------~~~~~~~~~~ 219 (244)
T cd05150 155 ATRP-AEEDLVVTHGDACLPNIIVDPG-KFSGFIDLGRLGVADRYQDLALAVRSLRE-------------NLGGEEYAAR 219 (244)
T ss_pred hhCC-CcCceEEECCCCCCccEEEeCC-cEEEEEEccccccccHHHHHHHHHHHhhh-------------hcCChHHHHH
Confidence 4332 3567899999999999999984 55679999999999999999998753211 1112678899
Q ss_pred HHHHHhh
Q 018207 271 FLHAYLS 277 (359)
Q Consensus 271 fl~~Y~~ 277 (359)
|+++|..
T Consensus 220 f~~~Y~~ 226 (244)
T cd05150 220 FLDRYGI 226 (244)
T ss_pred HHHHcCC
Confidence 9999943
No 19
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.90 E-value=2.3e-22 Score=179.70 Aligned_cols=204 Identities=19% Similarity=0.210 Sum_probs=131.8
Q ss_pred EEEec-CCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcC-CC-CceeEEEeCC-------ce
Q 018207 41 VIPVK-GAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKH-GQ-GPRLLGRFHN-------GR 110 (359)
Q Consensus 41 i~~l~-gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~-gl-~P~~~~~~~~-------g~ 110 (359)
++++. ||.+|.+|++ +..+|+|++.... ...+...|.++++.|++. ++ +|+++..... +.
T Consensus 2 ~~~~~~gG~~n~vy~~---------~~~~VlR~~~~~~-~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~ 71 (235)
T cd05155 2 IEPVDSGGTDNATFRL---------GDDMSVRLPSAAG-YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS 71 (235)
T ss_pred ceeccCCCcccceEEc---------CCceEEEcCCccc-hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence 35564 8899999998 3579999987532 222456899999999875 55 6888875432 47
Q ss_pred EEEeecCCCCCCCCCCCh-HHHHHHHHHHHhhccCCCCCCCc---ccch--HHHHHHHHHhhcCCChhhhhhcCHHHHHH
Q 018207 111 VEEFINARTLSASDIRDP-EISALIAAKLKEFHDLDMPGQKI---VRLW--DRSRNWLIATKNLSPPEEARAFRLDAIEE 184 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~-~~~~~la~~La~lH~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 184 (359)
+|+||+|+++......++ .+.+++|+.|++||+++.+.... +..+ .....|......... ..........+.+
T Consensus 72 l~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~ 150 (235)
T cd05155 72 VYRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIE-ALEGVIDVDAARA 150 (235)
T ss_pred EEEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHH-HcccccChHHHHH
Confidence 999999999876544443 57799999999999987653211 1111 012223222110000 0000011122222
Q ss_pred HHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 018207 185 EISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPD 264 (359)
Q Consensus 185 ~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~ 264 (359)
.++.+.+ + ....+.++||||+|++|||++++ +...||||++|++|||++|||..+.. ++
T Consensus 151 ~~~~~~~-~-~~~~~~~l~HGD~~~~Nvlv~~~-~i~giIDw~~a~~gDp~~Dla~~~~~------------~~------ 209 (235)
T cd05155 151 LWEAALR-A-PWWGPPVWFHGDLAPGNLLVQDG-RLSAVIDFGCLGVGDPACDLAIAWTL------------LD------ 209 (235)
T ss_pred HHHHHhc-c-cccCCceEEeCCCCCCcEEEECC-CEEEEEeCcccCcCChHHHHHHHHhc------------CC------
Confidence 2222222 1 12367799999999999999864 43469999999999999999986531 12
Q ss_pred HHHHHHHHHHHh
Q 018207 265 LEERHRFLHAYL 276 (359)
Q Consensus 265 ~~~~~~fl~~Y~ 276 (359)
...++.|++.|.
T Consensus 210 ~~~~~~~~~~y~ 221 (235)
T cd05155 210 EDSRAAFRAALG 221 (235)
T ss_pred HHHHHHHHHHcC
Confidence 567789999995
No 20
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.89 E-value=6.7e-23 Score=182.16 Aligned_cols=215 Identities=25% Similarity=0.351 Sum_probs=132.7
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC-CceeEEEeC----C---ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ-GPRLLGRFH----N---GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl-~P~~~~~~~----~---g~v 111 (359)
+++++++|.+|.+|+++.. ++++|+|++... ........|..+++.|.+.|+ +|+++.... . ..+
T Consensus 1 ~i~~l~~G~~n~~~~v~~~------~~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~ 73 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTD------DGRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLL 73 (239)
T ss_dssp -EEEEEESSSSEEEEEEET------TSEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEE
T ss_pred CCccCCCCCeeeEEEEEEC------CcEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEE
Confidence 4789999999999999864 469999998754 122233589999999999998 899987432 2 279
Q ss_pred EEeecCCCCCCC--CCCChHHHHHHHHHHHhhccCCCCCCCcccchH-HHHHHHHHhhcCCChhhhhhc-CHHHHHH-HH
Q 018207 112 EEFINARTLSAS--DIRDPEISALIAAKLKEFHDLDMPGQKIVRLWD-RSRNWLIATKNLSPPEEARAF-RLDAIEE-EI 186 (359)
Q Consensus 112 ~e~i~G~~l~~~--~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~-~~ 186 (359)
++|++|+++... .-..+..+.++|+.|++||+.+.+......... ....+................ ....+.+ .+
T Consensus 74 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (239)
T PF01636_consen 74 MEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLL 153 (239)
T ss_dssp EEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred EEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHH
Confidence 999999877641 111246789999999999998643221111000 011111110000000000000 1223333 34
Q ss_pred HHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHH
Q 018207 187 STLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLE 266 (359)
Q Consensus 187 ~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
+.+.+.+.. ..+.++||||++++|||++++++.+.|||||.+++|+|++|++.++..+... .. .+
T Consensus 154 ~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~~~~~~~--------~~------~~ 218 (239)
T PF01636_consen 154 QELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLLRHFGED--------QD------PE 218 (239)
T ss_dssp HHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHHHHHTTH--------CH------HH
T ss_pred HHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHHHHhccc--------CC------HH
Confidence 455554432 6789999999999999999433666899999999999999999998543210 11 56
Q ss_pred HHHHHHHHHh
Q 018207 267 ERHRFLHAYL 276 (359)
Q Consensus 267 ~~~~fl~~Y~ 276 (359)
..+.|+++|.
T Consensus 219 ~~~~~~~~~~ 228 (239)
T PF01636_consen 219 FRRAYLEAYG 228 (239)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 7778888885
No 21
>PLN02876 acyl-CoA dehydrogenase
Probab=99.88 E-value=1.2e-20 Score=196.17 Aligned_cols=284 Identities=13% Similarity=0.149 Sum_probs=177.4
Q ss_pred HHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHh
Q 018207 17 VEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMS 94 (359)
Q Consensus 17 ~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~ 94 (359)
..+.+++.+..+.+.. ..+.+.++++++|.+|.+|+++... +....++|+|....+.. ...+..+|.++++.|.
T Consensus 21 ~~l~~~l~~~~~~~~~--~~~~~~v~~l~gG~sn~ty~l~~~~--~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~ 96 (822)
T PLN02876 21 DALLRYAAANVAGFPV--PPSTFKVSQFGHGQSNPTFLLEVGN--GGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG 96 (822)
T ss_pred HHHHHHHHHhCCCcCC--CccceeEEEeCCCCcCceEEEEECC--CCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh
Confidence 6677788877776643 2234789999999999999998642 11125899999765421 1123468999999998
Q ss_pred c-CCC-CceeEEEeCC-------ceEEEeecCCCCCCCCCC--Ch----HHHHHHHHHHHhhccCCCCCC-----Cccc-
Q 018207 95 K-HGQ-GPRLLGRFHN-------GRVEEFINARTLSASDIR--DP----EISALIAAKLKEFHDLDMPGQ-----KIVR- 153 (359)
Q Consensus 95 ~-~gl-~P~~~~~~~~-------g~v~e~i~G~~l~~~~l~--~~----~~~~~la~~La~lH~~~~~~~-----~~~~- 153 (359)
. .++ +|+++..+.+ ++||||++|+.+....+. ++ .+..++++.|++||+++.+.. ..|.
T Consensus 97 ~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~ 176 (822)
T PLN02876 97 EHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDN 176 (822)
T ss_pred hcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCc
Confidence 5 455 7998886532 389999999876533221 12 366789999999999865421 1121
Q ss_pred -chHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCC---ceeEEeccCCCCCeeEeCCCCce-EEEEEee
Q 018207 154 -LWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQ---HIGFCHNDLQYGNIMIDEVTKSI-TLIDYEY 228 (359)
Q Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~---~~vl~HgDl~~~Nil~~~~~~~v-~lIDwE~ 228 (359)
....+..|..+........ .......+.+.+.+|...++.... +.++||||++++|||+++++.++ .|||||+
T Consensus 177 ~~~~~l~~w~~~~~~~~~~~--~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~ 254 (822)
T PLN02876 177 YCKRQVERWAKQYLASTGEG--KPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWEL 254 (822)
T ss_pred hHHHHHHHHHHHHHHhhccc--CCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeec
Confidence 2235666766543221100 000123355556677665533221 57999999999999998643454 5999999
Q ss_pred ccCCchHHhHHHHHHHHhhccCCCCC---CCCCCCC-CCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchh
Q 018207 229 ASYNPVAYDIANHFCEMAADYHTETP---HLMDYSK-YPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHL 304 (359)
Q Consensus 229 a~~~~~~~Dla~~~~e~~~~~~~~~~---~~~~~~~-~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~ 304 (359)
+..|||.+|||.++..|...+....+ ..+.... .++...++.|++.|.+.+|.+++..+ +..|..+..+
T Consensus 255 a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~e~~~~Y~~~~g~~~~~~~-------~~~~~~~~~~ 327 (822)
T PLN02876 255 STLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPSLPEYLAEYCSASGKPWPAAN-------WKFYVAFSLF 327 (822)
T ss_pred cccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCCHHHHHHHHHHHhCCCCCCcc-------cHHHHHHHHH
Confidence 99999999999998766543211100 1111111 11223578999999998886543222 2235566666
Q ss_pred hHHHHHHhh
Q 018207 305 SWGLWGIIS 313 (359)
Q Consensus 305 ~w~lWa~~~ 313 (359)
.|++-+.-+
T Consensus 328 r~a~I~~~~ 336 (822)
T PLN02876 328 RGASIYAGV 336 (822)
T ss_pred HHHHHHHHH
Confidence 665554433
No 22
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.88 E-value=1.4e-20 Score=173.93 Aligned_cols=269 Identities=19% Similarity=0.179 Sum_probs=170.3
Q ss_pred hhccCCCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHH
Q 018207 8 MENKESRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEI 87 (359)
Q Consensus 8 ~~~~~~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~ 87 (359)
|-.-.+..+.++...+.+.. -. ....+..+.+ ..|.||++.+. ++++|||++.+. ....+...|.
T Consensus 5 ~~~~~~~~~~~~~~~l~~~~-~g------~~~~~~~l~s-~eN~~f~~~~~------~g~~iLki~~~~-~~~~~i~~el 69 (331)
T COG2334 5 MAVFTPLTSDEAAAALEAYH-YG------LDGSLRGLNS-EENSNFRVQTE------DGRYILKIYRPG-WTRAEIPFEL 69 (331)
T ss_pred cccccCcChHHHHHHHHhcC-cC------cccccccccc-ccCceEEEEec------CCCeEEEEecCC-CCHHHHHHHH
Confidence 43444456666666666642 11 2235667766 89999999864 567799999876 2333445899
Q ss_pred HHHHHHhcCCCC-ceeEEE-e-------CC----ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCC-ccc
Q 018207 88 RTFEFMSKHGQG-PRLLGR-F-------HN----GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQK-IVR 153 (359)
Q Consensus 88 ~~l~~l~~~gl~-P~~~~~-~-------~~----g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~-~~~ 153 (359)
++++.|.+.|++ |.++-. + .+ ..|++|++|+++.. -.+.+.++.+|+.|++||........ .|.
T Consensus 70 ~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~--~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~ 147 (331)
T COG2334 70 ALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLER--DDNAEQLEELGRMLGRLHLALRGFPFERPN 147 (331)
T ss_pred HHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCcCcCC--CCcHHHHHHHHHHHHHHHHHhCcCCccCCC
Confidence 999999999983 444222 1 22 16899999999874 23567899999999999987554320 122
Q ss_pred chHHHHHHH----HH--hhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCc---eeEEeccCCCCCeeEeCCCCceEEE
Q 018207 154 LWDRSRNWL----IA--TKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQH---IGFCHNDLQYGNIMIDEVTKSITLI 224 (359)
Q Consensus 154 ~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~---~vl~HgDl~~~Nil~~~~~~~v~lI 224 (359)
... ...|. .. ......+.. ....+...++.+.+.+.. ..| ..+||||++++||++++++..+.+|
T Consensus 148 ~~~-~~~w~~~~~~~~~~~~~~~~~~----l~a~~~~~~~~~~~~~~~-~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~i 221 (331)
T COG2334 148 ALR-RLEWDILEPRALLRLDLVEPED----LRAALLAALDRLLARLPA-HLPALGDQIIHGDLHPDNVLFDDDTDVSGFI 221 (331)
T ss_pred ccc-ccchhhhcchhhhhhcccCchh----hHHHHHHHHHHHHhhchh-hCCcccceeeecCCCccceeEcCCCCeeeEE
Confidence 111 11221 10 001111100 112334444555444432 222 2399999999999999862236799
Q ss_pred EEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchh
Q 018207 225 DYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHL 304 (359)
Q Consensus 225 DwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~ 304 (359)
||++|++|+.++|||..++.|.. + ...+ ......|+++|.+.+ ++++.|+..+-. +..+..+
T Consensus 222 DFdDa~~~~~i~DlAi~l~~~~~----------d-~~~~-~~~~~a~l~GY~~v~--pl~~~El~~Lp~----l~r~~a~ 283 (331)
T COG2334 222 DFDDAGYGWFIYDLAIALNAWNG----------D-EADP-RAAIAAFLEGYEEVR--PLTAAELELLPD----LRRLRAL 283 (331)
T ss_pred EccccccchHHHHHHHHHHHhhc----------C-CCCc-HHHHHHHHHHHHhcC--CCCHHHHHHHHH----HHHHHHH
Confidence 99999999999999999877521 2 1122 678999999999875 678778665543 4444455
Q ss_pred hHHHHHHhhcccC
Q 018207 305 SWGLWGIISEHVN 317 (359)
Q Consensus 305 ~w~lWa~~~~~~~ 317 (359)
....|........
T Consensus 284 ~~~~~~~~~~~~~ 296 (331)
T COG2334 284 RLWAWRLIRWLLP 296 (331)
T ss_pred HHHHHHhhhhhcC
Confidence 5555665554433
No 23
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.87 E-value=3.1e-21 Score=163.14 Aligned_cols=177 Identities=18% Similarity=0.202 Sum_probs=134.7
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
++.+|++|++++.. ....+++..+++||+.+..+. ..+++..++.|...+..... ....+ ..+..+
T Consensus 1 llv~Wl~Ge~~~~~-----~~~~~La~~l~~LH~~p~~~~-~~~l~~~i~~Yw~~l~~~~~-------~~~wl-~~~~~~ 66 (188)
T PRK10271 1 MAVDYLPGEVKSYL-----PDTNELAGLLYHLHQQPRFGW-RITLLPLLEQYWQQSDPARR-------TPFWL-RMLKRL 66 (188)
T ss_pred CcccccCCCcCCCc-----cCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHhccccC-------CHHHH-HHHHHH
Confidence 36799999988643 236899999999999887433 35788899988887744221 11223 245555
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHH
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERH 269 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (359)
.......+.+.++||||++|+||+++++ ++.+||||||+.|||++|||.++.+ + .++++
T Consensus 67 ~~~~~~~~l~~~p~H~D~~~~N~~~~~~--~~~lIDwe~a~~gDp~~DLa~~~~~-------------~------~~~~~ 125 (188)
T PRK10271 67 RKAGEPRPLRLAPLHMDVHAGNLVHSAS--GLRLIDWEYAGDGDIALELAAVWVE-------------N------TEQHR 125 (188)
T ss_pred HhcccCCCCCeeeecCCCCCccEEEECC--CEEEEeCCcccCCCHHHHHHHHHcC-------------C------HHHHH
Confidence 5555556778899999999999999874 5899999999999999999998641 2 78999
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcccCCCCCCHHHHH
Q 018207 270 RFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYA 327 (359)
Q Consensus 270 ~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~~~~~~~dy~~y~ 327 (359)
.|++.|.... ..+ ...+..+++.|.+...++-.+|..++.++++ +-.|+..|
T Consensus 126 ~~l~~Y~~~~--~~d---~~~~~~~~~~W~p~~~~m~llWyev~~qq~~-d~~fl~~a 177 (188)
T PRK10271 126 QLVNDYATRA--KID---AAQLWRQVRRWFPWVLMLKAGWFEYRWRQTG-DQQFIRLA 177 (188)
T ss_pred HHHHHHhCcc--CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHH
Confidence 9999998531 232 3567889999999999999999999998875 33465443
No 24
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.87 E-value=2.1e-20 Score=170.33 Aligned_cols=223 Identities=17% Similarity=0.092 Sum_probs=142.0
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcC-CC-CceeEEEeCCceEEEeecC
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKH-GQ-GPRLLGRFHNGRVEEFINA 117 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~-gl-~P~~~~~~~~g~v~e~i~G 117 (359)
++.....|.+|.+|.+... ++.++|+|++.... .....++|.++++.|+.. .+ +|+++..+.+..+|++|+|
T Consensus 15 ~~~~~~~g~~~~v~~i~~~-----~g~~~VlR~p~~~~-~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~~~~y~~i~G 88 (276)
T cd05152 15 TLSLNESGLDFQVVFAKDT-----DGVPWVLRIPRRPD-VSERAAAEKRVLALVRKHLPVQVPDWRVHTPELIAYPKLPG 88 (276)
T ss_pred cceecCCcceeEEEEEEcC-----CCCeEEEEecCCHH-HHHHHHHHHHHHHHHHhcCCCCCCceeeecCceEEEeccCC
Confidence 5566677888899988532 26899999986432 122346899999999875 33 5777766677789999999
Q ss_pred CCCCCCCC-------------CChHHHHHHHHHHHhhccCCCCCC---Ccc--cchHHHHHHHHHhhcCCChhhhhhcCH
Q 018207 118 RTLSASDI-------------RDPEISALIAAKLKEFHDLDMPGQ---KIV--RLWDRSRNWLIATKNLSPPEEARAFRL 179 (359)
Q Consensus 118 ~~l~~~~l-------------~~~~~~~~la~~La~lH~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
.++...+. ..+.++.++|+.|++||+++.... ..+ ........|...+.+...... ...
T Consensus 89 ~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~---~~~ 165 (276)
T cd05152 89 VPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVETPEEVRQTMADRMDRVKEEFG---VSE 165 (276)
T ss_pred CcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCCCHHHHHHHHHHHHHHHHHhcC---CCH
Confidence 87642111 124578999999999999875321 111 111111223232221100000 011
Q ss_pred HHHHHHHHHHHHHHh---cCCCceeEEeccCCCCCeeEeCCCCc-eEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCC
Q 018207 180 DAIEEEISTLEKALY---RNDQHIGFCHNDLQYGNIMIDEVTKS-ITLIDYEYASYNPVAYDIANHFCEMAADYHTETPH 255 (359)
Q Consensus 180 ~~l~~~~~~l~~~l~---~~~~~~vl~HgDl~~~Nil~~~~~~~-v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~ 255 (359)
. + ++.+.+.+. ..+.+.++||||++++|||++++ ++ +.|||||.+++|||++|||.++..
T Consensus 166 ~-l---~~~~~~~L~~~~~~~~~~~lvHGD~~~~Nilv~~~-~~~~gviDWe~a~iGDPa~Dla~~~~~----------- 229 (276)
T cd05152 166 A-L---WNRWQAWLDDDSYWPRHTVLVHGDLHPGHILIDED-ARVTGLIDWTEAKVGDPARDFVLHYRI----------- 229 (276)
T ss_pred H-H---HHHHHHHHhhcCCCCCCCeeEeCCCCCCcEEEeCC-CCEEEEECcHhcccCCHHHHHHHHHHh-----------
Confidence 1 1 222333332 23556799999999999999874 44 459999999999999999987531
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHh
Q 018207 256 LMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDV 295 (359)
Q Consensus 256 ~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v 295 (359)
++ .+..+.|+++|....|.... +..++++..+
T Consensus 230 -~~------~~~~~~~~~~Y~~~~g~~~~-~~~~~~~~~~ 261 (276)
T cd05152 230 -FG------EAGLERLIDAYEAAGGRVWP-RMKEHIIELL 261 (276)
T ss_pred -cC------hHHHHHHHHHHHHcCCCCCc-hHHHHHHHHH
Confidence 12 67789999999987765432 3334554433
No 25
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=8.5e-20 Score=170.57 Aligned_cols=287 Identities=15% Similarity=0.080 Sum_probs=170.2
Q ss_pred CCCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHH
Q 018207 12 ESRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFE 91 (359)
Q Consensus 12 ~~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~ 91 (359)
.+-.|+.+...|... .+. ..-.+..+ ++..|.||+|.+. ++.++|+|+++++.........|.+++.
T Consensus 9 ~~l~p~~~~~a~~~~--g~~-----~~~~~~~l-~s~eN~vy~v~~~-----~~~~~vlKv~r~~~~~~~~i~~E~~~l~ 75 (325)
T PRK11768 9 QTLTPDLILDALESL--GLR-----VDGRLLAL-NSYENRVYQFGDE-----DGRRVVAKFYRPERWSDAQILEEHAFAL 75 (325)
T ss_pred CCCChHHHHHHHHHc--CCC-----CccceEee-ccccceEEEEecC-----CCCEEEEEEcCcccCCHHHHHHHHHHHH
Confidence 445778888888776 221 12345666 4578999999863 2578999998754211112247899999
Q ss_pred HHhcCCCC-ceeEEEeC------Cc---eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCC--CCCcccc-hHHH
Q 018207 92 FMSKHGQG-PRLLGRFH------NG---RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMP--GQKIVRL-WDRS 158 (359)
Q Consensus 92 ~l~~~gl~-P~~~~~~~------~g---~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~--~~~~~~~-~~~~ 158 (359)
.|.+.|+. |+++..+. +| .+++|++|+++.. .+++.+..+|+.||+||.+... ....|.. ...+
T Consensus 76 ~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~---~~~~~~~~lG~~LarlH~~~~~~~~~~r~~~~~~~~ 152 (325)
T PRK11768 76 ELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRAPEL---DNLDQLEWVGRFLGRIHQVGAKRPFEHRPTLDLQEY 152 (325)
T ss_pred HHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCCCCC---CCHHHHHHHHHHHHHHHhhccCCCCCCCCcCCHHHH
Confidence 99999883 44332111 22 6899999988653 3567889999999999996543 2222221 0111
Q ss_pred HHH-HHHhh--cCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchH
Q 018207 159 RNW-LIATK--NLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVA 235 (359)
Q Consensus 159 ~~~-~~~~~--~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~ 235 (359)
..+ ...+. .... ........+.+.+....+.+.+.....+.++||||+|++|||++ + .+.|||||.|++|++.
T Consensus 153 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~-d--~~~iIDFDd~~~g~~i 228 (325)
T PRK11768 153 GIEPRDWLLASDLIP-SDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR-D--GPHFVDLDDARMGPAV 228 (325)
T ss_pred HHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc-C--CcEEEeCCCCCCCCHH
Confidence 111 11111 1111 11111111122222233334332224677999999999999995 3 5789999999999999
Q ss_pred HhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcc
Q 018207 236 YDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEH 315 (359)
Q Consensus 236 ~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~ 315 (359)
+||+.++... . ..+ .++...|+++|.+.+ ++++.|+. ++.-+...+.+. .+.|..-.-.
T Consensus 229 ~DLa~~l~~~------------~--~~~-~~~~~~~l~GY~~~r--~l~~~e~~-~l~~l~~lR~~~---~~~W~~~r~~ 287 (325)
T PRK11768 229 QDLWMLLSGD------------R--AEQ-LMQLETLLEGYEEFC--EFDPRELA-LIEPLRALRLIH---YSAWLARRWD 287 (325)
T ss_pred HHHHHHhccC------------c--chh-HHHHHHHHHHhhccC--CCCHHHHH-HHHHHHHHHHHH---HHHHHhhcCC
Confidence 9999876411 0 112 567889999998764 57766643 333333344444 4445443322
Q ss_pred -----cCCCCCCHHHHHHHHHHHHHhccc
Q 018207 316 -----VNEIDFDYIGYAKQRFDQYWLTKP 339 (359)
Q Consensus 316 -----~~~~~~dy~~y~~~r~~~~~~~~~ 339 (359)
..-+.|.--.|-...+....++..
T Consensus 288 d~~~~~~f~~~~~~~~w~~~~~~~~~~~~ 316 (325)
T PRK11768 288 DPAFPKAFPWFGTEDYWEQQILELREQLA 316 (325)
T ss_pred CcchhhcCCCCCCchHHHHHHHHHHHHHH
Confidence 112356666666776665444433
No 26
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.87 E-value=3.7e-20 Score=169.32 Aligned_cols=249 Identities=18% Similarity=0.166 Sum_probs=163.5
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCC--CcccccchHHHHHHH
Q 018207 13 SRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGE--GVEVFFDRNDEIRTF 90 (359)
Q Consensus 13 ~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~--~~~~~~dr~~E~~~l 90 (359)
......+...+...+|.|.. ...+..++||.+|.+|++... +.++|||.+.. ......+.++|+.++
T Consensus 7 ~~~~~~l~~~l~~~ip~~~~-----~~~v~~~~~G~sn~t~~~~~~------~~~~vlR~P~~~~~~~~~~~~~re~~~i 75 (321)
T COG3173 7 ALDIAALAAYLRSQIPGYAG-----LLIVEEISGGWSNDTFRLGDT------GQKYVLRKPPRGDPVESAHDEKREYRVI 75 (321)
T ss_pred cCCHHHHHHHHHhhCcCcCC-----CceeeeccCCcccceEEEecC------CceEEEecCCccccchhhhHHHhHHHHH
Confidence 34557888889989999863 456677799999999999742 68999996532 234455667899999
Q ss_pred HHHhcCCC-CceeEEEeC--C----ceEEEeecCCCCCCCCC---CChHHHH-HHHHHHHhhccCCCCCC---Cccc--c
Q 018207 91 EFMSKHGQ-GPRLLGRFH--N----GRVEEFINARTLSASDI---RDPEISA-LIAAKLKEFHDLDMPGQ---KIVR--L 154 (359)
Q Consensus 91 ~~l~~~gl-~P~~~~~~~--~----g~v~e~i~G~~l~~~~l---~~~~~~~-~la~~La~lH~~~~~~~---~~~~--~ 154 (359)
+.+....+ +|+.++.+. . +.||+|++|+.+..... ....... .+++.|+.||+++..+. ..++ .
T Consensus 76 ~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~ 155 (321)
T COG3173 76 AALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYR 155 (321)
T ss_pred HHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccc
Confidence 88888755 577777653 3 37999999965433211 1124555 99999999999874221 1222 3
Q ss_pred hHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 155 WDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
...+..|........... ....+.+.....+++........+.+++|||++++|||++++ +.+.|||||.+++|||
T Consensus 156 ~rql~~~~~~~~~~~~~~---~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~-~~~gVlDwe~~~lGDP 231 (321)
T COG3173 156 GRQLARWDDEYRRAKKEL---GGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPG-RPTGVLDWELATLGDP 231 (321)
T ss_pred cchhhHHHHHHHHHHHhc---cCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCC-CeeEEEeccccccCCc
Confidence 345566665553111000 012234455566666654335778899999999999999996 5688999999999999
Q ss_pred HHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 018207 235 AYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQ 282 (359)
Q Consensus 235 ~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~ 282 (359)
+.||+.++ |...-....-..++ . +......++..|.+.+|..
T Consensus 232 ~~Dl~~~~--W~~~~~~~~~~~~~--~--~~~~~~~l~a~y~~~~G~~ 273 (321)
T COG3173 232 LEDLAIIC--WTIFDEPAARAIFR--L--GVPALDELLATYARARGLA 273 (321)
T ss_pred HHHHHHHH--hccccchhhhhhcc--c--CcccHHHHHHHHHHhcCcc
Confidence 99999985 32100000000001 0 0135667788888876654
No 27
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.86 E-value=1.3e-19 Score=168.66 Aligned_cols=234 Identities=19% Similarity=0.228 Sum_probs=146.5
Q ss_pred eeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC-CceeEEEeC--------C--ceEEEeecCC
Q 018207 50 NEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ-GPRLLGRFH--------N--GRVEEFINAR 118 (359)
Q Consensus 50 N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl-~P~~~~~~~--------~--g~v~e~i~G~ 118 (359)
+.+|+|.+. ++.+|||+...+... ...|..++++|++.|+ +|+++.... + +.+++|++|+
T Consensus 10 ~~v~~v~t~------~g~~~LK~~~~~~~~---~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~ 80 (313)
T TIGR02906 10 RNVYKVETD------SGNKCLKKINYPPER---LLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEGR 80 (313)
T ss_pred ccEEEEEeC------CCCeEEEEcCCCHHH---HHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccCc
Confidence 459999853 457999987533211 2368889999999998 567765432 1 2799999998
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCc----c--c---chHHHHHHHHHhh-------cCCChhhhhhc---CH
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQKI----V--R---LWDRSRNWLIATK-------NLSPPEEARAF---RL 179 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~----~--~---~~~~~~~~~~~~~-------~~~~~~~~~~~---~~ 179 (359)
++. ..++..+.++|+.||+||......... + . ...........+. ........... ..
T Consensus 81 ~~~---~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
T TIGR02906 81 ECD---FNNPIDLKKAAKGLALFHHASKGYVPPDGSKIRSKLGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEV 157 (313)
T ss_pred CCC---CCCHHHHHHHHHHHHHHHHhCCCCCCCCcchhhccccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 876 345677899999999999875432110 0 0 0111111111111 00000000000 01
Q ss_pred HH----HHHHHHHHHH-----HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccC
Q 018207 180 DA----IEEEISTLEK-----ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYH 250 (359)
Q Consensus 180 ~~----l~~~~~~l~~-----~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~ 250 (359)
+. ..+.++.+.+ .......+.++||||++++||++++ +.+.|||||.++++++.+|||.++..++..
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~--~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~-- 233 (313)
T TIGR02906 158 DYFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD--NEVYVIDFDYCTIDLPVRDLRKLIIKLMKK-- 233 (313)
T ss_pred HHHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC--CcEEEEECcccccCCcHHHHHHHHHHHHHh--
Confidence 11 1111222211 1112345779999999999999987 468999999999999999999998776511
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhc
Q 018207 251 TETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISE 314 (359)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~ 314 (359)
...++ .+....|+++|.+.. ++++.|++.+.. +..+.+.+|.++.-...
T Consensus 234 ---~~~~d------~~~~~~~l~gY~~~~--~L~~~e~~~l~~----~l~~p~~~~~~~~~y~~ 282 (313)
T TIGR02906 234 ---NGVWD------LEKAKEIIEAYSSIN--PLSKEEKEVLYI----DLAFPHKFWKIGKQYYY 282 (313)
T ss_pred ---ccCCC------HHHHHHHHHHhhccC--CCCHHHHHHHHH----HHhChHHHHHHHHHHHh
Confidence 00122 577889999999863 688888776654 77778877776655443
No 28
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.83 E-value=8.4e-19 Score=163.01 Aligned_cols=242 Identities=14% Similarity=0.169 Sum_probs=152.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC-CceeE-EEeC--------C--
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ-GPRLL-GRFH--------N-- 108 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl-~P~~~-~~~~--------~-- 108 (359)
+..+ .|..|.+|+|.+. ++.+++|......+. ......+++.|.+.|+ .|.++ ...+ +
T Consensus 12 v~~i-~~~~~~v~~v~T~------~G~~~Lk~~~~~~~~---l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~~~~ 81 (309)
T TIGR02904 12 PEEM-EQVTGKLFKVYTD------QGVFALKKLYADRNT---IESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHGHFL 81 (309)
T ss_pred ceee-ecccCcEEEEEeC------CCCEEEEEeccchHh---HHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEECCEE
Confidence 3444 3347899999864 467999987632211 1356778899999998 34333 2211 1
Q ss_pred ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcc--cc---hH-HHHHHHHH---hhcCCChhhh----h
Q 018207 109 GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIV--RL---WD-RSRNWLIA---TKNLSPPEEA----R 175 (359)
Q Consensus 109 g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~--~~---~~-~~~~~~~~---~~~~~~~~~~----~ 175 (359)
..|++|++|.. ....+..+.++|+.||+||.+........ .+ .. ....|... +.......+. .
T Consensus 82 ~~L~~wi~G~~----~~~~~~~~~~~~~~LA~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 157 (309)
T TIGR02904 82 YYLMPWLDIER----NEERNYQHESMFQELALLHRKTVKTERVTEEELKKHYERTLSRWENIPEGLEEFIVEAEAKWYMS 157 (309)
T ss_pred EEEeCCccccc----ccCCHHHHHHHHHHHHHHHHhhhCCCcccHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 26899999943 23344668999999999999876421100 00 11 11223222 1111000000 0
Q ss_pred hc----------CHHHHHHHHHHHHHH----HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHH
Q 018207 176 AF----------RLDAIEEEISTLEKA----LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANH 241 (359)
Q Consensus 176 ~~----------~~~~l~~~~~~l~~~----l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~ 241 (359)
++ ..+.+...++.|.+. ......+.++||||++++|+|++++ +.+.+||||++++++|++||+.+
T Consensus 158 ~fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~~-~~~~iIDfd~~~~d~~~~DLa~~ 236 (309)
T TIGR02904 158 PFELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDET-RGGYFINFEKASFASPLTDLAAF 236 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcCC-CCEEEEEhhhcccCCcHHHHHHH
Confidence 00 012222223333221 1123567899999999999999876 67899999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhcc
Q 018207 242 FCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISEH 315 (359)
Q Consensus 242 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~~ 315 (359)
+...+..+ + . +.+....|+++|.+.. +++++|.+.|+. +.++.+-+|-+|--....
T Consensus 237 ~~~~~~~~--------~---~-~~~~~~~~l~~Y~~~~--pL~~~E~~~l~~----~L~fP~~f~~~~~~yy~~ 292 (309)
T TIGR02904 237 FRRSFGTY--------P---Q-PIDEMFEWFYTYEKTL--PLTDEEIHLLTS----YLAYPGPFIRVIQNYTKQ 292 (309)
T ss_pred HHHHHhhC--------C---C-ChHHHHHHHHHHHhcC--CCCHHHHHHHHH----HHhCCHHHHHHHHHHHhc
Confidence 87765421 1 1 1567889999999875 578778776665 788899999998776654
No 29
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.82 E-value=6.7e-19 Score=166.58 Aligned_cols=224 Identities=17% Similarity=0.196 Sum_probs=143.7
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-------ccccch-HHH
Q 018207 15 IPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-------EVFFDR-NDE 86 (359)
Q Consensus 15 ~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-------~~~~dr-~~E 86 (359)
.++.+...+.+..+-.. ..+..++++++||..|.+|+++..+ +++++|||...+.. ....+| ..|
T Consensus 8 ~~~~v~~yl~~~~~~~~---~~~~~~~~elggGn~N~VyrV~~~~----g~~svIVKqa~p~~r~~g~~wpl~~eR~~~E 80 (401)
T PRK09550 8 TEEDAVEYAALKLGLFD---PKALLTAREIGDGNLNLVFRVSDTE----GGKSVIVKQALPYVRVVGESWPLTLDRARIE 80 (401)
T ss_pred CHhHHHHHHHHhcCCCC---CcccceeeEcCCCceEEEEEEEeCC----CCeEEEEEecCcccccccccccccHHHHHHH
Confidence 45667778855444343 3466889999999999999998642 12589999854221 122333 468
Q ss_pred HHHHHHHhcC--CCCceeEEEeCC--ceEEEeecCCCCCC----CCCCChHHHHHHHHHHHhhccCCCCC----C-----
Q 018207 87 IRTFEFMSKH--GQGPRLLGRFHN--GRVEEFINARTLSA----SDIRDPEISALIAAKLKEFHDLDMPG----Q----- 149 (359)
Q Consensus 87 ~~~l~~l~~~--gl~P~~~~~~~~--g~v~e~i~G~~l~~----~~l~~~~~~~~la~~La~lH~~~~~~----~----- 149 (359)
...|+.+.+. +.+|++++.+++ .+||||+++.+.-. ..-..|...+++|+.|+++|-.+... .
T Consensus 81 ae~L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~~~~~~~~ 160 (401)
T PRK09550 81 AEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSSEEKKAL 160 (401)
T ss_pred HHHHHHHHhhCCCCCCeEEEECCCCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcChhhhhhH
Confidence 8888888764 558999999875 49999999854211 11234678899999999988432110 0
Q ss_pred ----CcccchHHHH-------HHHHHhhcCCChhhh----hhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeE
Q 018207 150 ----KIVRLWDRSR-------NWLIATKNLSPPEEA----RAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMI 214 (359)
Q Consensus 150 ----~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~ 214 (359)
.++.+.+ +. -+.........+... ....-..|..++.+|...+. ..+.++||||||++|||+
T Consensus 161 ~~~f~N~~l~~-ite~lvft~P~~~~~~n~~~p~l~~~~~~l~~d~~L~~~~~~L~~~~~--~~~~~l~HgDl~~gni~~ 237 (401)
T PRK09550 161 VAKFTNPELCK-ITEDLVFTDPYFDHETNNFEPELEPEVEELRADKELKLEVAKLKHKFL--TKAEALLHGDLHTGSIFV 237 (401)
T ss_pred HhhcCCHHHhh-hhHhhccccchhhhhhccCChhhHHHHHHHHhCHHHHHHHHHHHHHHh--cCCCceeeccCCcccEEe
Confidence 0111000 00 011111111111100 00112344555666655442 456789999999999999
Q ss_pred eCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccC
Q 018207 215 DEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYH 250 (359)
Q Consensus 215 ~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~ 250 (359)
+++ .+.+||||+|.+|+|+||||.++.++...|-
T Consensus 238 ~~~--~~~viD~E~a~~G~~~~Dlg~~lanl~~~~~ 271 (401)
T PRK09550 238 TEE--ETKVIDPEFAFYGPIGFDIGTFIANLLLNYC 271 (401)
T ss_pred eCC--CcEEEeccccccCChHHHHHHHHHHHHHHHh
Confidence 874 6999999999999999999999988876653
No 30
>PRK10593 hypothetical protein; Provisional
Probab=99.82 E-value=1.2e-18 Score=160.54 Aligned_cols=234 Identities=11% Similarity=0.127 Sum_probs=142.0
Q ss_pred CCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC-cccccchHHHHHHHHHHhcCC-C-CceeEEEeC------
Q 018207 37 NSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG-VEVFFDRNDEIRTFEFMSKHG-Q-GPRLLGRFH------ 107 (359)
Q Consensus 37 ~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~-~~~~~dr~~E~~~l~~l~~~g-l-~P~~~~~~~------ 107 (359)
...++++|+||.++.+|+++.. ++++|+|+.... .... ...|+..++.|.+.+ + +|+++....
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~------~~~~~~k~~~~~~~~~~--~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g 86 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDS------QGNPMPLMARSFSTPGV--AQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPG 86 (297)
T ss_pred hhheeeecCCccceeEEEEEcC------CCCEEEEEecccccchH--HHHHHHHHHHHccCCCCCcCcEEEEeccCCcCC
Confidence 3457899999999999999743 457888886542 2222 248999999999875 4 899997542
Q ss_pred -CceEEEeecCCCCCCCCCCCh----HHHHHHHHHHHhhccCCCCCC---CcccchHHHHHHHHH-h-------hcCCCh
Q 018207 108 -NGRVEEFINARTLSASDIRDP----EISALIAAKLKEFHDLDMPGQ---KIVRLWDRSRNWLIA-T-------KNLSPP 171 (359)
Q Consensus 108 -~g~v~e~i~G~~l~~~~l~~~----~~~~~la~~La~lH~~~~~~~---~~~~~~~~~~~~~~~-~-------~~~~~~ 171 (359)
.++|||+|+|.++.... .++ .....+++.|++||+.+..+. ........+..|..+ + +....
T Consensus 87 ~~~LVmE~i~G~~~~~~~-~~~~~~~~l~~~l~~~La~LH~~~~~g~~g~~~~~~~~~w~~f~~~rl~~~~~~~~~~~~- 164 (297)
T PRK10593 87 PDVLLLERLRGVSVEAPA-RTPERWEQLKDQIVEGLLAWHRIDSRGCVGAVDSTQENLWPSWYQQRVEVLWTTLNQFNN- 164 (297)
T ss_pred CeEEEEeccCCEecCCCC-CCHHHHHHHHHHHHHHHHHHhCCChhhcccCCCCcccccHHHHHHHHHHHHHhhhhhccc-
Confidence 24899999998775421 222 345567899999999753211 100011122233321 1 10000
Q ss_pred hhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCc-eEEEEEeeccCCchHHhHHHHHHHHhhccC
Q 018207 172 EEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKS-ITLIDYEYASYNPVAYDIANHFCEMAADYH 250 (359)
Q Consensus 172 ~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~-v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~ 250 (359)
..........+....+.+.+.+.....+.++||||+|++||+++.+++. +.+||+..+.+|++.+||+..+.
T Consensus 165 ~~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~rE~DLa~~~~------- 237 (297)
T PRK10593 165 TGLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPREYELFRLMD------- 237 (297)
T ss_pred cCCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCHHHhHHHhhc-------
Confidence 0000000111211222333444333456799999999999999864234 67999998999999999987631
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchh
Q 018207 251 TETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHL 304 (359)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~ 304 (359)
..++ +.|+++|.+.++....-++...++ ++|-.+.|+
T Consensus 238 ---------~~f~-----~~f~~~Y~~~~pl~~g~~~R~~ly---~Ly~~l~h~ 274 (297)
T PRK10593 238 ---------NGLA-----EQLLWRYLQKAPVAESFIWRRWLY---VLWDEVAQL 274 (297)
T ss_pred ---------CCcc-----HHHHHHHHHhCCCCccHHHHHHHH---HHHHHHHHH
Confidence 1122 489999999876544433333333 234444443
No 31
>PRK06148 hypothetical protein; Provisional
Probab=99.79 E-value=3.2e-17 Score=173.05 Aligned_cols=295 Identities=15% Similarity=0.148 Sum_probs=182.7
Q ss_pred ccCCCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHH
Q 018207 10 NKESRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRT 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~ 89 (359)
.+...+..++.+++.++.+- . -++++|. |..|.||+|+.. ++..||+|+.+... .....+.|.++
T Consensus 7 ~~p~~s~~~~~~~~~~~ygl-~-------~~~~~L~-s~~d~nf~v~~~-----~g~~yVLKi~~~~~-~~~~~~~q~~~ 71 (1013)
T PRK06148 7 PAPEFTTKDAEALLAQHFGI-S-------ATATPLD-GERDLNFRLTTD-----DGADYILKIVNPSE-PRVESDFQTAA 71 (1013)
T ss_pred CCCCCCHHHHHHHHHHHcCC-c-------eEEeecC-CcCCceEEEEeC-----CCCeEEEEEcCCcc-chhHHHHHHHH
Confidence 34555778999999988632 1 2567784 567999999864 25799999997542 11223467789
Q ss_pred HHHHhcC--CC-CceeEEEe----------CCc-----eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCC-
Q 018207 90 FEFMSKH--GQ-GPRLLGRF----------HNG-----RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQK- 150 (359)
Q Consensus 90 l~~l~~~--gl-~P~~~~~~----------~~g-----~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~- 150 (359)
+++|.+. |+ +|+++... .+| ++++|++|+++....-.++..+.++|+.|++||........
T Consensus 72 L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p 151 (1013)
T PRK06148 72 LDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHP 151 (1013)
T ss_pred HHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999886 66 67776432 122 58999999988652234678899999999999986432221
Q ss_pred ---cccchHHH-HHHHHH-hhcCCChhhhhhcCHHHHHHHHHHHHHHH-h-cCCCceeEEeccCCCCCeeEeCCC-CceE
Q 018207 151 ---IVRLWDRS-RNWLIA-TKNLSPPEEARAFRLDAIEEEISTLEKAL-Y-RNDQHIGFCHNDLQYGNIMIDEVT-KSIT 222 (359)
Q Consensus 151 ---~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~l~~~l-~-~~~~~~vl~HgDl~~~Nil~~~~~-~~v~ 222 (359)
....|+.. ..|+.. +.....+. ....+.+.++.+.+.+ . ....|..+||||+++.|||+++++ +.+.
T Consensus 152 ~~~r~~~Wdl~~~~~l~~~l~~i~d~~-----~r~~l~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~is 226 (1013)
T PRK06148 152 GALRDLDWDLRHAGRARDRLHFIDDPE-----DRALVERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERIS 226 (1013)
T ss_pred CcccccccccccchhhhhhhhhcCCHH-----HHHHHHHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceE
Confidence 11112110 012111 11111111 1122333344443311 1 135677899999999999999752 1454
Q ss_pred -EEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhccc
Q 018207 223 -LIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLA 301 (359)
Q Consensus 223 -lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~ 301 (359)
||||++++++++.+|||..+..++. + ..-| .+....|+++|.+.+ ++++.|++.|.. +...+.+
T Consensus 227 GiIDFgDa~~~~~v~DLAialay~~~----------~-~~~p-~~~~~a~laGY~sv~--pLt~~E~~~L~~-li~~R~~ 291 (1013)
T PRK06148 227 GLIDFGDAVHAPRICEVAIAAAYAIL----------D-HPDP-IGAAAALVAGYHAVY--PLQAQELDLLFD-LIRMRLA 291 (1013)
T ss_pred EEEECcccccccHHHHHHHHHHHHhc----------C-CCCh-HHHHHHHHHHHhhcC--CCCHHHHHHHHH-HHHHHHH
Confidence 9999999999999999998754432 1 1112 457779999999865 688888776653 3444545
Q ss_pred chhhHHHHHHhhcccCCCCCCHHHHHHHHHHHHHhccccccCCCC
Q 018207 302 SHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELLGSSG 346 (359)
Q Consensus 302 ~~~~w~lWa~~~~~~~~~~~dy~~y~~~r~~~~~~~~~~~~~~~~ 346 (359)
..+.|+.| +....+.+ + |...-....|+..+++.+.+.
T Consensus 292 ~s~~~~~~---~~~~~P~n-~---Y~~~~~~~~w~~l~~~~~~~~ 329 (1013)
T PRK06148 292 VSVTNSAS---RREQTPDN-P---YLAISEAPAWRLLERLDAMNP 329 (1013)
T ss_pred HHHHHHHH---hhhcCCCC-h---hhhhccHHHHHHHHHHHhCCH
Confidence 54555555 44433332 3 445555666666666555443
No 32
>PRK06149 hypothetical protein; Provisional
Probab=99.79 E-value=2e-17 Score=174.42 Aligned_cols=298 Identities=12% Similarity=0.094 Sum_probs=184.1
Q ss_pred hhhhhc----cCCCChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc
Q 018207 5 ENVMEN----KESRIPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF 80 (359)
Q Consensus 5 ~~~~~~----~~~~~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~ 80 (359)
+++|.+ +...+..++.+++.+..+ . + -+++++ +|..|.+|+|++. +++||+|+.+.....
T Consensus 4 ~~~~~~~~~~~p~ls~~~~~~ll~~~yg-l----~---~~~~~L-~s~~d~nf~v~t~------~~~yVLKi~~~~~~~- 67 (972)
T PRK06149 4 EALIDRSSLPAPDVSEAQAERILAEHYG-L----S---GTLTEL-GSQQDRNFRVDSD------GGRFVLKICHAAYAA- 67 (972)
T ss_pred hhhhccCCCCCCCCCHHHHHHHHHHhcC-C----c---eEEEec-CCcCcceEEEEec------CCcEEEEeCCccCCh-
Confidence 345554 334466888888877643 1 1 256777 4567999999853 468999998754211
Q ss_pred cchHHHHHHHHHHhcC--CC-CceeEEEeC----------C----ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhcc
Q 018207 81 FDRNDEIRTFEFMSKH--GQ-GPRLLGRFH----------N----GRVEEFINARTLSASDIRDPEISALIAAKLKEFHD 143 (359)
Q Consensus 81 ~dr~~E~~~l~~l~~~--gl-~P~~~~~~~----------~----g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~ 143 (359)
.....|.+++++|.+. |+ +|+++.... + .++++||+|+++......+++.++++|+.+++||.
T Consensus 68 ~~l~~e~~~l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~ 147 (972)
T PRK06149 68 VELEAQHAALRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVAR 147 (972)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHH
Confidence 2345788899999987 77 577764321 1 27999999998764322367889999999999998
Q ss_pred CCCCCCCccc-----chHH--HHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc--CCCceeEEeccCCCCCeeE
Q 018207 144 LDMPGQKIVR-----LWDR--SRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR--NDQHIGFCHNDLQYGNIMI 214 (359)
Q Consensus 144 ~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~--~~~~~vl~HgDl~~~Nil~ 214 (359)
....... |. .|+. .......+.....+.. ....+.+.+..+.+.+.. ...+..+||||+++.||++
T Consensus 148 al~~f~h-p~~~r~~~Wdl~~~~~~~~~ll~~i~d~~----~r~~l~~~~~~~~~~l~~~~~~L~~g~IH~Dl~~~Nilv 222 (972)
T PRK06149 148 ALADFDH-PGLDRTLQWDLRHAGPVVAHLLSHITDPA----QRARIAEATRDAARRLQPLAPALPLQAVHLDITDDNVVG 222 (972)
T ss_pred HHcCCCC-CCCCCccccchhhhHHHHHHHHhhcCCHH----HHHHHHHHHHHHHHHhhhhhhhCcccccCCCCCcccEEE
Confidence 6543321 11 1210 0011111111111111 112233333334333322 2468899999999999999
Q ss_pred eCCC-C--c-eEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHH
Q 018207 215 DEVT-K--S-ITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQ 290 (359)
Q Consensus 215 ~~~~-~--~-v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~ 290 (359)
+++. + . ..||||+++++++..+|||..++.++... ..+ ......|+++|.+.+ ++++.|++.
T Consensus 223 ~~~~~~~~~v~giIDFgD~~~~~~i~DLAial~~~~~~~------~~d------p~~~~~~l~GY~svr--pLt~~E~~~ 288 (972)
T PRK06149 223 SRDADGRWQPDGVIDFGDLVRTWRVADLAVTCASLLHHA------GGD------PFSILPAVRAYHAVR--PLSEAELKA 288 (972)
T ss_pred cCCCCCCcceeEEEEcccchhhhHHHHHHHHHHHHhccc------CCC------HHHHHHHHHHHHhcC--CCCHHHHHH
Confidence 8642 2 2 36999999999999999999887654310 011 335678999998764 688888877
Q ss_pred HHHHhhhhcccchhhHHHHHHhhcccCCCCCCHHHHHHHHHHHHHhccccccCCC
Q 018207 291 LLQDVEKYTLASHLSWGLWGIISEHVNEIDFDYIGYAKQRFDQYWLTKPELLGSS 345 (359)
Q Consensus 291 l~~~v~~~~~~~~~~w~lWa~~~~~~~~~~~dy~~y~~~r~~~~~~~~~~~~~~~ 345 (359)
|.. +...+.+..+ .|+-.+....+.+ .|........|+..+++.+.+
T Consensus 289 L~~-li~~R~~~~~---~~~~~~~~~~p~n----~Y~~~~~~~~w~~l~~~~~~~ 335 (972)
T PRK06149 289 LWP-LVVARAAVLV---ASSEQQLAVDPDN----AYVRDNLAHEWEIFDVATSVP 335 (972)
T ss_pred HHH-HHHHHHHHHH---HHHHHHhhhCCCC----hhhhhccHHHHHHHHHHHhCC
Confidence 654 2223333333 4444454433322 455777777777777776655
No 33
>PRK12396 5-methylribose kinase; Reviewed
Probab=99.79 E-value=5.8e-18 Score=158.48 Aligned_cols=225 Identities=18% Similarity=0.200 Sum_probs=145.3
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC------cccccch-HHHH
Q 018207 15 IPVEAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG------VEVFFDR-NDEI 87 (359)
Q Consensus 15 ~~~~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~------~~~~~dr-~~E~ 87 (359)
.++.+...+.+..+... ..+.+++++|+||..|.+|+|.... +++++|||...+- .....+| ..|.
T Consensus 11 ~~~~v~~yl~~~l~~~~---~~~~~~~~eigdGnlN~VfrV~~~~----~~~svIVKQAlp~vRv~~swpL~~~R~~~E~ 83 (409)
T PRK12396 11 EANDVIVYVKEKLSKFE---HAKGLQCKEIGDGNLNYVFRVWDEQ----KNISVIVKQAGDTARISDEFKLSTNRIRIES 83 (409)
T ss_pred CHhHHHHHHHHhcCCCC---CcccceeeEcCCCceEEEEEEeeCC----CCceEEEEeccHhhccCCCCCCChHHHHHHH
Confidence 44667777777544322 3466889999999999999998521 1468998765432 2333455 4699
Q ss_pred HHHHHHhcC--CCCceeEEEeCC--ceEEEeecCCC-CCCC---CCCChHHHHHHHHHHHhhccCCCCCC----------
Q 018207 88 RTFEFMSKH--GQGPRLLGRFHN--GRVEEFINART-LSAS---DIRDPEISALIAAKLKEFHDLDMPGQ---------- 149 (359)
Q Consensus 88 ~~l~~l~~~--gl~P~~~~~~~~--g~v~e~i~G~~-l~~~---~l~~~~~~~~la~~La~lH~~~~~~~---------- 149 (359)
.+|+.+.+. +.+|++|+.++. ..|||+++... +... .-..|...+++|..|++.|-.+-...
T Consensus 84 ~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~~~kk~~v 163 (409)
T PRK12396 84 DVLQLEEELAPGLVPKVYLFDSVMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKKELV 163 (409)
T ss_pred HHHHHHHhhCCCcCCeEEEECcHHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccChHHHHHhh
Confidence 999988774 568999999975 48999997633 2211 12347889999999999987332110
Q ss_pred ---CcccchHHHH------HHHHHh-hcC-CChh---h-hhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeE
Q 018207 150 ---KIVRLWDRSR------NWLIAT-KNL-SPPE---E-ARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMI 214 (359)
Q Consensus 150 ---~~~~~~~~~~------~~~~~~-~~~-~~~~---~-~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~ 214 (359)
.+|.+.+..+ -|.+.. ... ..+. . .....-..|+.++.+|...+. ....+++|||||+||||+
T Consensus 164 ~~f~N~eLc~itedlvft~Py~~~~~~n~~~~~~~~~~~~~l~~D~~Lk~ev~~Lk~~F~--~~~~aLlHGDlHtGSI~v 241 (409)
T PRK12396 164 KNYINPELCEITEDLVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRLEVAKLKFSFM--TNAQALIHGDLHTGSVFV 241 (409)
T ss_pred HhcCCHHHHHHhcccccccCcccchhccCCCChhhHHHHHHHhcCHHHHHHHHHHHHHHH--hcchhhccCcCCCCCEEe
Confidence 1121111100 011100 000 0000 0 000112345555666665542 566799999999999999
Q ss_pred eCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccC
Q 018207 215 DEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYH 250 (359)
Q Consensus 215 ~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~ 250 (359)
+++ .+++||.|+|-|||++||||.++..+...|-
T Consensus 242 ~~~--~~kvIDpEFAfyGP~gFDiG~~lanll~ay~ 275 (409)
T PRK12396 242 KND--STKVIDPEFAFYGPMGYDIGNVMANLMFAWV 275 (409)
T ss_pred cCC--ceEEEcccccccCCcHHHHHHHHHHHHHHHh
Confidence 984 6999999999999999999999988776653
No 34
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.76 E-value=4.6e-17 Score=153.35 Aligned_cols=222 Identities=17% Similarity=0.208 Sum_probs=138.5
Q ss_pred hHHHHHHHHHhccCCCCCC--CCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-------cccch-HH
Q 018207 16 PVEAKELLKSLASEWEDVV--DRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-------VFFDR-ND 85 (359)
Q Consensus 16 ~~~~~~~l~~~~~~w~~~~--~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-------~~~dr-~~ 85 (359)
.+.+..++.+. +.|.... ....+++++++||.+|.+|+|+.. ++++|||...+... .-.+| ..
T Consensus 11 ~~~l~~yl~~~-~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~------~~svVVKqa~p~~r~vga~wpl~~~R~~~ 83 (418)
T PLN02756 11 EKSLVEYIKAT-PALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSS------SGSFVIKQALPYIRCIGESWPMTKERAYF 83 (418)
T ss_pred HHHHHHHHHHc-cchhhhcCCCCCCceEEEcCCCceeeEEEEEcC------CccEEEEeCCccccCCCccccCCccHHHH
Confidence 35666677665 3332210 125678999999999999999852 46899998764321 22344 34
Q ss_pred HHHHHHHHhcC--CCCceeEEEeCC--ceEEEeecC--CCCCCC---CCCChHHHHHHHHHHHhh--------ccCCCCC
Q 018207 86 EIRTFEFMSKH--GQGPRLLGRFHN--GRVEEFINA--RTLSAS---DIRDPEISALIAAKLKEF--------HDLDMPG 148 (359)
Q Consensus 86 E~~~l~~l~~~--gl~P~~~~~~~~--g~v~e~i~G--~~l~~~---~l~~~~~~~~la~~La~l--------H~~~~~~ 148 (359)
|...|+.+.+. +.+|++|+.+++ .++||||+| ..+... ....|...+++|..|++. |......
T Consensus 84 Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~~~~kk 163 (418)
T PLN02756 84 EATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTTEHK 163 (418)
T ss_pred HHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccChhhhh
Confidence 67777666553 468999999974 489999987 344332 223478899999999988 4332110
Q ss_pred C------CcccchHHHHH------HHHHhhcCCC-hhh---h-hhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCC
Q 018207 149 Q------KIVRLWDRSRN------WLIATKNLSP-PEE---A-RAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGN 211 (359)
Q Consensus 149 ~------~~~~~~~~~~~------~~~~~~~~~~-~~~---~-~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~N 211 (359)
. .+|.+.+-.+. |.+.-..... +.. . ....-..++.++.+|...+. ....+++|||+|+||
T Consensus 164 ~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~~~~p~l~~~~~~l~~d~~L~~~v~~Lk~~f~--~~~~~L~HGDl~~g~ 241 (418)
T PLN02756 164 RAVAEFCGNVELCRLTEQVVFSDPYKVSQYNRWTSPYLDRDAEAVREDNILKLEIAELKSMFC--ERAQALVHGDLHTGS 241 (418)
T ss_pred HHHHHhcCCHHHHHHHHhheeccccccchhcCCCCcchHHHHHHHhcCHHHHHHHHHHHHHHH--hcccceeecCCCCCc
Confidence 0 01111000000 0000000000 100 0 00112356666677766552 556799999999999
Q ss_pred eeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhc
Q 018207 212 IMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAAD 248 (359)
Q Consensus 212 il~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~ 248 (359)
|+++++ .+.+||.|+|-+||++||||.++..+...
T Consensus 242 i~~~~~--~~~~id~ef~~~g~~~~d~g~~~~~~~~~ 276 (418)
T PLN02756 242 VMVTPD--STQVIDPEFAFYGPMGFDIGAFLGNLILA 276 (418)
T ss_pred EEEcCC--CceEecchhhccCchHHhHHHHHhhhHHH
Confidence 999984 58999999999999999999987655443
No 35
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=99.75 E-value=2.9e-17 Score=149.67 Aligned_cols=260 Identities=17% Similarity=0.230 Sum_probs=136.7
Q ss_pred HHHHHHHHhccCCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCC
Q 018207 18 EAKELLKSLASEWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHG 97 (359)
Q Consensus 18 ~~~~~l~~~~~~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~g 97 (359)
.|.+.+.+.++. +....++++++||..|..|+++. ++++++||+.......+. +.|++-|+.|++..
T Consensus 4 ~i~~~~~~~~~~-----~~~i~~~~~v~GG~i~~a~~~~~------~~~~~FvK~~~~~~~~~f--~~Ea~gL~~L~~~~ 70 (288)
T PF03881_consen 4 AIEQQISEQLGA-----DFKITSIEPVSGGDINEAYRLDT------DGGSYFVKVNSESGRDMF--EGEAEGLKALAEAN 70 (288)
T ss_dssp HHHHHHHHHHTS----------EEEEE--SSSSEEEEEET------TS-EEEEEEEEGGGCCHH--HHHHHHHHHHCHTT
T ss_pred HHHHHHHHHhCC-----CCceeeeEecCCCChhheEEEEC------CCccEEEEecChhhHHHH--HHHHHHHHHHHhcC
Confidence 456666666532 22456899999999999999983 378999999763322222 58999999996543
Q ss_pred --CCceeEEEeC----CceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhcc-CCCCCC---------C--cccch-HHH
Q 018207 98 --QGPRLLGRFH----NGRVEEFINARTLSASDIRDPEISALIAAKLKEFHD-LDMPGQ---------K--IVRLW-DRS 158 (359)
Q Consensus 98 --l~P~~~~~~~----~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~-~~~~~~---------~--~~~~~-~~~ 158 (359)
.+|+++.... ..+|+|||+..+.+ +...+.+|+.||+||+ .+.+.. . .++.| +.+
T Consensus 71 ~~~vP~vi~~G~~~~~~fLlle~l~~~~~~------~~~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~W 144 (288)
T PF03881_consen 71 PIRVPKVIAWGEYDDDAFLLLEFLEMGSPS------PPDWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDSW 144 (288)
T ss_dssp TSBS--EEEEEE-SSCCEEEEE--------------CCHHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-H
T ss_pred CCCCCeEEEEEeecCCceEEEEeecCCCCC------chhHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCCH
Confidence 3899998652 35999999876332 2247999999999999 433211 0 11111 112
Q ss_pred HHHHHHhhcCCChh----hhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 159 RNWLIATKNLSPPE----EARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 159 ~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
..|... .++.+. .........+++..+.+.+.+.....+++++||||++||++++.+ +..+|||-- +.+|++
T Consensus 145 ~~Ff~~--~RL~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~-g~p~l~DPa-~yygh~ 220 (288)
T PF03881_consen 145 EEFFAE--QRLRPQLELAREKGGLDAELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDAD-GEPVLFDPA-CYYGHR 220 (288)
T ss_dssp HHHHHH--HCCHHHHHHHHHCTSS-CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETT-E-EEE-S----EEE-C
T ss_pred HHHHHH--HHHHHHHHHHHhhCCchhHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCC-CCceeeccc-cccCch
Confidence 222211 111110 000111234455555666655545567799999999999999997 779999986 889999
Q ss_pred HHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhc
Q 018207 235 AYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISE 314 (359)
Q Consensus 235 ~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~ 314 (359)
.+|||..- + +..++ ..|+++|.+..+....-++...|++ +|-.+.|+.
T Consensus 221 E~DLam~~--------------l-fggf~-----~~f~~~Y~~~~Pl~~g~~~R~~lY~---Ly~lL~H~~--------- 268 (288)
T PF03881_consen 221 EVDLAMTR--------------L-FGGFP-----DEFYDAYQEHYPLSEGWEDRNPLYQ---LYHLLNHLN--------- 268 (288)
T ss_dssp HHHHHHHC--------------C-CSTTH-----HHHHHHHHHHS---TTHHHHHHHHH---HHHHHHHHH---------
T ss_pred Hhhhhhhh--------------h-hCCCC-----HHHHHHHHhcCCCCcCHHHHHHHHH---HHHHHHHHH---------
Confidence 99999751 1 12232 4799999998765444444444443 233333322
Q ss_pred ccCCCCCCHHHHHHHHHHHHH
Q 018207 315 HVNEIDFDYIGYAKQRFDQYW 335 (359)
Q Consensus 315 ~~~~~~~dy~~y~~~r~~~~~ 335 (359)
.-+ -.|..-++.-++++.
T Consensus 269 lFG---~~Y~~~~~~~l~~ll 286 (288)
T PF03881_consen 269 LFG---GSYRSQVRRILKRLL 286 (288)
T ss_dssp HC----GCHHHHHHHHHHHHH
T ss_pred HhC---chHHHHHHHHHHHHh
Confidence 111 137777777666654
No 36
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=99.74 E-value=4.3e-17 Score=150.96 Aligned_cols=199 Identities=18% Similarity=0.166 Sum_probs=124.1
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCC-------Ccccccch-HHHHHHHHHHhcC--CCCceeEEEeCCc--e
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGE-------GVEVFFDR-NDEIRTFEFMSKH--GQGPRLLGRFHNG--R 110 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~-------~~~~~~dr-~~E~~~l~~l~~~--gl~P~~~~~~~~g--~ 110 (359)
.++||..|.+|+|..+. +++++|||...+ +.....+| ..|..+|+...+. +.+|++|+++++- .
T Consensus 2 EigdGnlN~VfrV~~~~----g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~ 77 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQE----GDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVT 77 (370)
T ss_pred cCCCCceEEEEEEEcCC----CCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcccccee
Confidence 47899999999998531 236899876542 22334556 4688888887764 4589999999753 8
Q ss_pred EEEeecCCC-CCC---CCCCChHHHHHHHHHHHhhccCCCCCC-------------CcccchHHH------HHHHHHhhc
Q 018207 111 VEEFINART-LSA---SDIRDPEISALIAAKLKEFHDLDMPGQ-------------KIVRLWDRS------RNWLIATKN 167 (359)
Q Consensus 111 v~e~i~G~~-l~~---~~l~~~~~~~~la~~La~lH~~~~~~~-------------~~~~~~~~~------~~~~~~~~~ 167 (359)
+||+++... +.. ..-..|..++++|+.|++.|-.+.... .+|.+.+.. ..|......
T Consensus 78 vMEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~~~n 157 (370)
T TIGR01767 78 VMEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDYALEPKVKKALVAQFTNPELCDITERLVFTDPYFDHDTN 157 (370)
T ss_pred hHhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhhhhh
Confidence 999997532 211 112347889999999999874332111 011111100 001110000
Q ss_pred CCChhh---h-hhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHH
Q 018207 168 LSPPEE---A-RAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFC 243 (359)
Q Consensus 168 ~~~~~~---~-~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~ 243 (359)
...+.. . .......++.++..|...+ .....++||||||++||+++++ .+.+||||+|.+|+++||||.++.
T Consensus 158 ~~~p~l~~~~~~l~~d~~l~~~v~~Lk~~f--~~~~~~llHGDl~~gNi~~~~~--~~~~iD~e~~~~G~~~~Dlg~~ia 233 (370)
T TIGR01767 158 DFEEELRPFVAKLRNDDSLKIEAAKLKHSF--LASAETLLHGDLHSGSIFVSEH--ETKVIDPEFAFYGPIGFDIGQFIA 233 (370)
T ss_pred cCChhHHHHHHHHhcCHHHHHHHHHHHHhh--ccCcceeeeccCCcccEEEcCC--CCEEEcCcccccCchHhhHHHHHH
Confidence 011100 0 0011123444444554433 2456799999999999999874 588999999999999999999998
Q ss_pred HHhhcc
Q 018207 244 EMAADY 249 (359)
Q Consensus 244 e~~~~~ 249 (359)
+....|
T Consensus 234 nL~l~~ 239 (370)
T TIGR01767 234 NLFLNA 239 (370)
T ss_pred HHHHHH
Confidence 876654
No 37
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.69 E-value=1.7e-15 Score=129.68 Aligned_cols=220 Identities=17% Similarity=0.261 Sum_probs=150.6
Q ss_pred CCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCC-C-CceeEEEeCC----ce
Q 018207 37 NSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHG-Q-GPRLLGRFHN----GR 110 (359)
Q Consensus 37 ~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~g-l-~P~~~~~~~~----g~ 110 (359)
+.-+.+.++||..|..|+|+.. ..++++|+....... .-..|+.-|+.|++.+ + +|+++..... .+
T Consensus 17 ~i~er~~v~gG~inea~~v~dg------~~~~FvK~n~~~~~~--~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~syl 88 (286)
T COG3001 17 EIKEREEVSGGDINEAWRLRDG------TDPFFVKCNQREQLS--MFTAEADGLELLARSNTITVPKVIAVGASRDHSYL 88 (286)
T ss_pred hhhcccccCCccccceeEeecC------CcceEEEecchhhHH--HHHHHHHHHHHHHhcCCccccceEEecCCCCeeEE
Confidence 3446788999999999999742 589999997543211 1247899999999887 5 7999988742 48
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCC------------CcccchH-HHHH--------H-HHHhhcC
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQ------------KIVRLWD-RSRN--------W-LIATKNL 168 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~------------~~~~~~~-~~~~--------~-~~~~~~~ 168 (359)
|++|++-.+++. .-...+|+.||+||+..-+.. +.|+.|. .+.. | ++.+.+.
T Consensus 89 Vle~L~~~~~d~------~~~~~~GqqLA~LH~~~~~~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlqlar~r 162 (286)
T COG3001 89 VLEYLPTGPLDA------HSAFILGQQLARLHQWGGQAQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQLARER 162 (286)
T ss_pred EEeeccCCCCCc------hhHHHHHHHHHHHHhhcCccccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHHHHHh
Confidence 999998766652 347899999999998643211 1233221 1111 1 1111111
Q ss_pred CChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhc
Q 018207 169 SPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAAD 248 (359)
Q Consensus 169 ~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~ 248 (359)
. ..+..+++....+.+.+...+..+.++||||+.+|..+..+ + .+++|-- |-+|||.+|||+.= +
T Consensus 163 g-------~~f~did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~-G-Pv~fDPA-~y~GDrE~Dlam~e--l--- 227 (286)
T COG3001 163 G-------LTFGDIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKD-G-PVIFDPA-CYWGDRECDLAMLE--L--- 227 (286)
T ss_pred C-------CCccCHHHHHHHHHHHHhcCCCCcceeecccccccccccCC-C-Ceeeccc-cccCCcccceehhh--h---
Confidence 1 12334555666677777767777899999999999999886 4 8999974 78999999999762 1
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccch
Q 018207 249 YHTETPHLMDYSKYPDLEERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASH 303 (359)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~ 303 (359)
+..|| ..|.++|.+.++.+..-.+...+++ +|-++.|
T Consensus 228 ----------Fggfp-----~efy~gY~sv~PL~~G~~eRk~iYq---LY~llnh 264 (286)
T COG3001 228 ----------FGGFP-----PEFYDGYQSVSPLPAGYLERKPIYQ---LYHLLNH 264 (286)
T ss_pred ----------hcCCc-----HHHHHhhhccCCCCCchHHHhHHHH---HHHHHHH
Confidence 22344 3799999998876666566666664 3444444
No 38
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=1e-14 Score=119.89 Aligned_cols=144 Identities=27% Similarity=0.479 Sum_probs=108.4
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcC-CCCceeEEEeC----CceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKH-GQGPRLLGRFH----NGRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~-gl~P~~~~~~~----~g~v~e~i 115 (359)
++.++.|..|.+|++... +..+++|+...... ..+...|..+++.+... ...|+++.... ..++++|+
T Consensus 3 ~~~i~~g~~~~v~~~~~~------~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK------DEDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred ceecccccccceEEEEec------CCeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 356888999999999853 47899999765432 22345799999999887 45788887764 24899999
Q ss_pred cCCCCCCC-CCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 116 NARTLSAS-DIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 116 ~G~~l~~~-~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
+|..+... ..........+++.|+.+|....
T Consensus 76 ~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~------------------------------------------------ 107 (155)
T cd05120 76 EGETLDEVSEEEKEDIAEQLAELLAKLHQLPL------------------------------------------------ 107 (155)
T ss_pred CCeecccCCHHHHHHHHHHHHHHHHHHhCCCc------------------------------------------------
Confidence 99766421 01112445566666666665432
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHH
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEM 245 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~ 245 (359)
.+++|||++|+||++++. +.+.++||+.+.++++.+|++.+++.+
T Consensus 108 -----~~i~H~Dl~~~Nil~~~~-~~~~l~Df~~~~~~~~~~d~~~~~~~~ 152 (155)
T cd05120 108 -----LVLCHGDLHPGNILVDDG-KILGIIDWEYAGYGPPAFDLAAALLFN 152 (155)
T ss_pred -----eEEEecCCCcceEEEECC-cEEEEEecccccCCChHHHHHHHHHHh
Confidence 589999999999999984 789999999999999999999998754
No 39
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=99.54 E-value=7e-13 Score=113.23 Aligned_cols=210 Identities=17% Similarity=0.143 Sum_probs=136.3
Q ss_pred EecCCcc-eeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC-CceeEEEeC----CceEEEeec
Q 018207 43 PVKGAMT-NEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ-GPRLLGRFH----NGRVEEFIN 116 (359)
Q Consensus 43 ~l~gG~~-N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl-~P~~~~~~~----~g~v~e~i~ 116 (359)
++..|.| -.+|++.... ..-+.+|+-.... ....+.|..-+++++..++ +|.|++... .+++|+-++
T Consensus 25 ~v~~geS~~~v~rl~a~~-----r~g~~~k~~~~~~--~a~L~~Ea~RlrWla~~~l~~P~V~~~~~~~~~~wLl~salp 97 (266)
T COG3231 25 RVTEGESGAGVFRLFADS-----RPGLYLKIASSGP--AAELEGEAARLRWLAGQGLGCPRVLGLEDDADQAWLLMSALP 97 (266)
T ss_pred eeeccCCCCeEEEEeccC-----CCceEEEEecCcc--hhhhhhHHHHHHHhcccCCCCCceEeeccCcchhHHhhhhcC
Confidence 3444444 4688886532 4567777754432 2234589999999999999 699988765 248999999
Q ss_pred CCCCCCCC-CCC-hHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCC----Ch-hhhhh-cCHHHHHHHHHH
Q 018207 117 ARTLSASD-IRD-PEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLS----PP-EEARA-FRLDAIEEEIST 188 (359)
Q Consensus 117 G~~l~~~~-l~~-~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~-~~~~~l~~~~~~ 188 (359)
|.++.... ..+ ...+..+|+.|+.||.+++..++ - -.++..++..++... .. ..+.+ ..-....+.+..
T Consensus 98 G~~~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCP--F-d~rl~~rl~~a~~r~~a~~vdesdfd~e~qgr~~~El~d~ 174 (266)
T COG3231 98 GEDASHPRYALDPKRAVPLLAEALRRLHELPVEACP--F-DRRLARRLAKARARVRAGLVDESDFDEERQGRTAEELFDE 174 (266)
T ss_pred CCcccchhhcCCHHHHHHHHHHHHHHHhcCChhhCC--c-chHHHHHHHHHHHHHhccCCChhhcChhhcCCCHHHHHHH
Confidence 99877644 223 36778999999999998765543 1 123444444433221 11 11100 011123334444
Q ss_pred HHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHH
Q 018207 189 LEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEER 268 (359)
Q Consensus 189 l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 268 (359)
|+... ......|+||||....|+|+++. .--.+||+..+|.+++..||+........ ++++..-.
T Consensus 175 L~~~r-p~~edLVv~HGDACLPN~i~d~~-rf~GfIDlGrlGVaDRh~DLala~~s~~~-------------nl~g~~~~ 239 (266)
T COG3231 175 LEARR-PAVEDLVVTHGDACLPNFILDGW-RFSGFIDLGRLGVADRHQDLALATWSLRF-------------NLGGDVWD 239 (266)
T ss_pred HHhcC-CchhhceeecCcccCcceEecCC-ceEEeeecCcccchHHHHhHHHHHHHHHh-------------ccCcchhh
Confidence 44432 34567799999999999999985 44459999999999999999987644322 12225567
Q ss_pred HHHHHHHhh
Q 018207 269 HRFLHAYLS 277 (359)
Q Consensus 269 ~~fl~~Y~~ 277 (359)
..|+..|..
T Consensus 240 ~~fl~~Yg~ 248 (266)
T COG3231 240 DPFLDAYGR 248 (266)
T ss_pred HHHHHHhCc
Confidence 789999954
No 40
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=99.50 E-value=1.3e-12 Score=125.11 Aligned_cols=259 Identities=15% Similarity=0.179 Sum_probs=152.5
Q ss_pred HHHHHHHHHhccCCCCCCCCCCeEEEEec--CCcceeEEEEEeCCCCC----CCCcEEEEEEeCCCc--------c----
Q 018207 17 VEAKELLKSLASEWEDVVDRNSLQVIPVK--GAMTNEVFQIKWLTKTE----TFSHKVLLRVYGEGV--------E---- 78 (359)
Q Consensus 17 ~~~~~~l~~~~~~w~~~~~~~~~~i~~l~--gG~~N~~y~v~~~~~~~----~~~~~~vlRi~~~~~--------~---- 78 (359)
+++.+.+++.+.+=.. -.+..+++.|+ .|....+.+|+..+... .-.+++||||+.... .
T Consensus 16 ~dve~~l~~~l~t~a~--~g~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~~~ 93 (414)
T PF07914_consen 16 EDVEEALQEALGTKAK--FGENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFEGG 93 (414)
T ss_pred HHHHHHHHHHhCCCcC--cCCCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhccccc
Confidence 6788888877653111 12345677775 48899999998765411 235799999985310 0
Q ss_pred cccc---------------hHHHHHHHHHHhcCC---C-CceeEEEeC-------Cc-eEEEeecCC-CCCCCCCCChHH
Q 018207 79 VFFD---------------RNDEIRTFEFMSKHG---Q-GPRLLGRFH-------NG-RVEEFINAR-TLSASDIRDPEI 130 (359)
Q Consensus 79 ~~~d---------------r~~E~~~l~~l~~~g---l-~P~~~~~~~-------~g-~v~e~i~G~-~l~~~~l~~~~~ 130 (359)
...+ -.+|..+.+.+.+.. + .|++|+..+ .| ++|||+++. ....-+-.+++.
T Consensus 94 ~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~~eq 173 (414)
T PF07914_consen 94 KGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLSVEQ 173 (414)
T ss_pred cccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCCHHH
Confidence 0000 125677777776653 3 699998642 13 899999984 443333335678
Q ss_pred HHHHHHHHHhhccCCCCCC-------Ccccc-hH---------HHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH-
Q 018207 131 SALIAAKLKEFHDLDMPGQ-------KIVRL-WD---------RSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA- 192 (359)
Q Consensus 131 ~~~la~~La~lH~~~~~~~-------~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~- 192 (359)
+.++++.||+||+...... ..+++ .. .+..++..+...... ...+.+.+.++.+...
T Consensus 174 l~~iv~aLA~~~A~sl~ls~ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~e~~~~~i~~~~~~~ 248 (414)
T PF07914_consen 174 LLQIVRALAKFHALSLKLSEEEKKSISGPDFLEEMFGEFFSEEGMKKIFENLRKIFGF-----FSPEKLEELIEKFEHYL 248 (414)
T ss_pred HHHHHHHHHHHHHhHccCCHHHhhhccCchHHHHHHHHHhchHHHHHHHHHHHhhccc-----cChHHHHHHHHHHHHhc
Confidence 8999999999998765311 01111 11 122222222222100 0112233333322221
Q ss_pred -----------H-hcCCCceeEEeccCCCCCeeEeCCCC---ceE-EEEEeeccCCchHHhHHHHHHHHhhccCCCCCCC
Q 018207 193 -----------L-YRNDQHIGFCHNDLQYGNIMIDEVTK---SIT-LIDYEYASYNPVAYDIANHFCEMAADYHTETPHL 256 (359)
Q Consensus 193 -----------l-~~~~~~~vl~HgDl~~~Nil~~~~~~---~v~-lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~ 256 (359)
+ ...+.+.|+|||||+..|||++.+++ .+. ||||..+..|.|+.||++++..++..
T Consensus 249 ~~~~~~~~~~~i~~~lG~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~lS~-------- 320 (414)
T PF07914_consen 249 PDIKNFEKASNINKQLGIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLLVSCLSG-------- 320 (414)
T ss_pred ccHHhHHHHhhhHHhcCCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHHHhcCCH--------
Confidence 1 11356889999999999999998644 244 99999999999999999998754321
Q ss_pred CCCCCCCCHHHHHHHHHHHhhc----C----CCCCCHHHHHHHHHHh
Q 018207 257 MDYSKYPDLEERHRFLHAYLSS----T----GDQPSDAEVKQLLQDV 295 (359)
Q Consensus 257 ~~~~~~~~~~~~~~fl~~Y~~~----~----~~~~~~~e~~~l~~~v 295 (359)
-| . .+..+.+|+.|.+. . ..+.+.+++...|+.+
T Consensus 321 ed-R----R~~~~~lL~~Yy~~f~~~l~~~~~~PfT~eqL~~sY~l~ 362 (414)
T PF07914_consen 321 ED-R----REHTEELLEYYYDTFTEALEDGGKAPFTLEQLKDSYRLY 362 (414)
T ss_pred HH-H----HHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHH
Confidence 01 0 22335666666542 2 2356666666666543
No 41
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=99.45 E-value=1.6e-12 Score=120.02 Aligned_cols=219 Identities=16% Similarity=0.197 Sum_probs=122.5
Q ss_pred CCcceeEEEEEeCC----CCCCCCcEEEEEEeCCCc--cccc----chHHHHHHHHHHhc--------C----CCCceeE
Q 018207 46 GAMTNEVFQIKWLT----KTETFSHKVLLRVYGEGV--EVFF----DRNDEIRTFEFMSK--------H----GQGPRLL 103 (359)
Q Consensus 46 gG~~N~~y~v~~~~----~~~~~~~~~vlRi~~~~~--~~~~----dr~~E~~~l~~l~~--------~----gl~P~~~ 103 (359)
.|+...+|+++..- .......++|+|...... .... --.+|..+.+.+.. . ...|+++
T Consensus 3 d~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~~ 82 (294)
T PF02958_consen 3 DNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKCY 82 (294)
T ss_pred CcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceEE
Confidence 46777888887632 111235789999976221 1111 12467766664432 1 2469999
Q ss_pred EEeC----CceEEEeec--C-CCCCCCCCCChHHHHHHHHHHHhhccCCCCCC-Ccc-------------cchHH-HHHH
Q 018207 104 GRFH----NGRVEEFIN--A-RTLSASDIRDPEISALIAAKLKEFHDLDMPGQ-KIV-------------RLWDR-SRNW 161 (359)
Q Consensus 104 ~~~~----~g~v~e~i~--G-~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~-~~~-------------~~~~~-~~~~ 161 (359)
+... ..+|+|.+. | +.......-+.+.+..+.+.||+||+...... ..| ..... ...|
T Consensus 83 ~~~~~~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PF02958_consen 83 YADEDPGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEKDPELFEELSSGLFEEPFFREELEEW 162 (294)
T ss_pred EeccCCCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhCchhhhhccccceeccchhhhhhHH
Confidence 8873 348999994 4 33333233456788999999999998643110 000 00000 1111
Q ss_pred HHHh--------hcCCChhhhhhc--CHHHHHHH----HHHHHHHH-hcCCCceeEEeccCCCCCeeEeCCCC----ceE
Q 018207 162 LIAT--------KNLSPPEEARAF--RLDAIEEE----ISTLEKAL-YRNDQHIGFCHNDLQYGNIMIDEVTK----SIT 222 (359)
Q Consensus 162 ~~~~--------~~~~~~~~~~~~--~~~~l~~~----~~~l~~~l-~~~~~~~vl~HgDl~~~Nil~~~~~~----~v~ 222 (359)
.... ....... .... ..+.+... ++.+.... .......|+||||+|.+|||+..++. .+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~ 241 (294)
T PF02958_consen 163 FEEFFEQGLKAFIESLDDE-WPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPIDVV 241 (294)
T ss_pred HHHHHHHHHHHHHHHHhhc-cchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEccccccccccce
Confidence 1111 0000000 0000 00112221 22223333 23456779999999999999976532 588
Q ss_pred EEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhc
Q 018207 223 LIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSS 278 (359)
Q Consensus 223 lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~ 278 (359)
+|||..+++|+|+.||+.++..... .+ .- .+..+.+++.|...
T Consensus 242 liDfQ~~~~g~p~~Dl~~fl~~s~~---------~~---~r-~~~~~~ll~~Y~~~ 284 (294)
T PF02958_consen 242 LIDFQLARYGSPAIDLAYFLYTSLD---------PE---LR-REHEDELLRHYHES 284 (294)
T ss_pred eeccccccCCCcHhHHHHHHHHCCC---------HH---HH-HHHHHHHHHHHHHH
Confidence 9999999999999999999864321 01 00 34556788888653
No 42
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.43 E-value=5e-12 Score=110.75 Aligned_cols=184 Identities=18% Similarity=0.192 Sum_probs=110.7
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--cc-------chHHHHHHHHHHhcCCC-CceeEEEeC--Cc
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FF-------DRNDEIRTFEFMSKHGQ-GPRLLGRFH--NG 109 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~-------dr~~E~~~l~~l~~~gl-~P~~~~~~~--~g 109 (359)
+.|+.|....+|++... +.++++|+..+.... .. ...+|..++..+...++ .|.++.... ..
T Consensus 2 ~~l~~G~~~~vy~~~~~------~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 75 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL------GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI 75 (211)
T ss_pred cccccCceEEEEEEeeC------CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE
Confidence 45778889999999752 578888876532110 01 12468888888888777 577776554 34
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
++|||++|.++.. . +.. + .+ ....... .+...+..+
T Consensus 76 lv~e~~~G~~L~~-------~-------~~~-~--------~~----~~~~i~~-----------------~i~~~l~~l 111 (211)
T PRK14879 76 IVMEYIEGEPLKD-------L-------INS-N--------GM----EELELSR-----------------EIGRLVGKL 111 (211)
T ss_pred EEEEEeCCcCHHH-------H-------HHh-c--------cH----HHHHHHH-----------------HHHHHHHHH
Confidence 8999999987631 0 000 0 00 0000000 011111111
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHH
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERH 269 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (359)
. ...++|+|++|+|||+++ +.+.+|||+.+..+++..|.+.-+..+...+.... .... .+...
T Consensus 112 H--------~~~i~H~Dl~p~Nil~~~--~~~~liDf~~a~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~ 174 (211)
T PRK14879 112 H--------SAGIIHGDLTTSNMILSG--GKIYLIDFGLAEFSKDLEDRAVDLHVLLRSLESTH------PDWA-EELFE 174 (211)
T ss_pred H--------hCCcccCCCCcccEEEEC--CCEEEEECCcccCCCcHHhhhccHHHHHHHhhccC------cchH-HHHHH
Confidence 1 125799999999999983 68999999999999999998865543332111000 0111 46788
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHH
Q 018207 270 RFLHAYLSSTGDQPSDAEVKQLLQD 294 (359)
Q Consensus 270 ~fl~~Y~~~~~~~~~~~e~~~l~~~ 294 (359)
.|+++|.... ..+.+++...+.+
T Consensus 175 ~f~~gY~~~~--~~~~~~~~~~~~~ 197 (211)
T PRK14879 175 AFLEGYREVM--GEKAEEVLERVKE 197 (211)
T ss_pred HHHHHHHHhh--cccHHHHHHHHHH
Confidence 9999998754 2444455544443
No 43
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.42 E-value=8.2e-12 Score=108.39 Aligned_cols=164 Identities=18% Similarity=0.224 Sum_probs=106.5
Q ss_pred ecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--ccc------c-hHHHHHHHHHHhcCCC-CceeEEEeCC--ceE
Q 018207 44 VKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFF------D-RNDEIRTFEFMSKHGQ-GPRLLGRFHN--GRV 111 (359)
Q Consensus 44 l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~------d-r~~E~~~l~~l~~~gl-~P~~~~~~~~--g~v 111 (359)
|+.|....+|+.... +.++++|....... ... . ..+|.++++.+...++ .|.++....+ .++
T Consensus 2 ig~G~~~~vy~~~~~------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 75 (199)
T TIGR03724 2 IAKGAEAIIYLGDFL------GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIV 75 (199)
T ss_pred CCCCceEEEEEeecC------CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
Confidence 456888999999742 57889888543211 001 1 1368899999988886 6888877655 589
Q ss_pred EEeecCCCCCCCCCCCh-HHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDP-EISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~-~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
|||++|.++........ .++.++++.|+.+|+
T Consensus 76 ~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~----------------------------------------------- 108 (199)
T TIGR03724 76 MEYIEGKPLKDVIEEGNDELLREIGRLVGKLHK----------------------------------------------- 108 (199)
T ss_pred EEEECCccHHHHHhhcHHHHHHHHHHHHHHHHH-----------------------------------------------
Confidence 99999987642100000 233333333333333
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHH
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHR 270 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (359)
..++|||++|+||+++ + +.+++|||+.+..+++..|.+..+..+..... ... .... .+....
T Consensus 109 ---------~gi~H~Dl~~~Nil~~-~-~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~-~~~~~~ 170 (199)
T TIGR03724 109 ---------AGIVHGDLTTSNIIVR-D-DKLYLIDFGLGKYSDEIEDKAVDLHVLKRSLE-----STH-PDKA-EELFEA 170 (199)
T ss_pred ---------CCeecCCCCcceEEEE-C-CcEEEEECCCCcCCCcHHhhhchHHHHHHHHh-----hhC-chhH-HHHHHH
Confidence 2579999999999998 3 68999999999999999998765432221110 000 0011 467789
Q ss_pred HHHHHhhc
Q 018207 271 FLHAYLSS 278 (359)
Q Consensus 271 fl~~Y~~~ 278 (359)
|+++|...
T Consensus 171 fl~~Y~~~ 178 (199)
T TIGR03724 171 FLEGYREE 178 (199)
T ss_pred HHHHHHhh
Confidence 99999864
No 44
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=99.39 E-value=1.2e-11 Score=110.46 Aligned_cols=234 Identities=17% Similarity=0.194 Sum_probs=140.6
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHH---HHHHHHhcCCCCceeEEEeC--CceEEEee-c
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEI---RTFEFMSKHGQGPRLLGRFH--NGRVEEFI-N 116 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~---~~l~~l~~~gl~P~~~~~~~--~g~v~e~i-~ 116 (359)
++.+|.++.++.|... +|...|+|+..+.... ..|. ..|+...-.|. .+++..+. +.+++|++ +
T Consensus 9 ~~~~g~~s~V~pv~~~-----dG~~avLKl~~p~~~~----~~E~~g~~~L~~w~G~Ga-Vrll~~d~~~~AlLLErl~~ 78 (253)
T PF04655_consen 9 PPAHGSSSLVVPVRRA-----DGTPAVLKLAPPHAEA----EHEARGEAALRWWNGRGA-VRLLAADPERGALLLERLDP 78 (253)
T ss_pred CCCCCcceEEEEEEcC-----CCCeEEEEecCCcccc----hhhhhHHhHhheeCCCCc-eeeeccccccchhhhhhccC
Confidence 4678999999999764 3789999998754321 1344 45665554553 58888884 44899999 6
Q ss_pred CCCCCCCCC--CChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 117 ARTLSASDI--RDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 117 G~~l~~~~l--~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
|.+|..-.. .+.+-...++..+++||...... .|.-+..+..|...+....... ........+.+......+.+
T Consensus 79 g~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~--~p~~l~~l~~~~~~l~~~~~~~-~~~~~~~l~~~a~~~~~~Ll- 154 (253)
T PF04655_consen 79 GRSLASLPREGDDDEATRIAAGLLRRLHRPAPEP--LPSGLPPLADWFARLFARARER-AGAPPRRLVDAAAALARELL- 154 (253)
T ss_pred CCchhhcccccCchHHHHHHHHHHHHHhCCCCCC--CCccchhHHHHHHHHHHHhHhh-hccccHHHHHHHHHHHHHHh-
Confidence 788864321 24567899999999999865421 1221233444544332221100 00011122233344444444
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHH
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHA 274 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 274 (359)
....+.+++|||||++|||-... .....||-. .-.|+|+||++.+++.-.. .+. ... ..+..+..++.
T Consensus 155 ~~~~~~~lLHGDLH~~NIL~~~~-~~WlaIDPk-gl~Gdp~yd~a~~l~n~~~--------~~~-~~~-~~~~i~~r~~~ 222 (253)
T PF04655_consen 155 ASPGEEVLLHGDLHHGNILAAGR-RGWLAIDPK-GLVGDPAYDLAPLLRNPLD--------ELP-DAD-DPERIRRRAAL 222 (253)
T ss_pred cCCCcceeeccccchHhhhccCC-CCceEeCCc-ccccccccCHHHHHhCccc--------ccc-ccc-cHHHHHHHHHH
Confidence 45667799999999999998774 567799986 7899999999999864221 010 001 12334444555
Q ss_pred HhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHH
Q 018207 275 YLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGI 311 (359)
Q Consensus 275 Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~ 311 (359)
.....| ++. +.++ .|..+....-++|++
T Consensus 223 la~~~g--ld~---~R~~----~W~~~~~vlsa~W~~ 250 (253)
T PF04655_consen 223 LAEAAG--LDR---ERIL----AWAFARAVLSAAWAL 250 (253)
T ss_pred HHHHHC--cCH---HHHH----HHHHHHHHHHHHHHh
Confidence 555544 332 2333 366666666667764
No 45
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=1.1e-11 Score=103.33 Aligned_cols=165 Identities=18% Similarity=0.264 Sum_probs=106.6
Q ss_pred ecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccccc------h-HHHHHHHHHHhcCCC-CceeEEEeCCc--eE
Q 018207 44 VKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVFFD------R-NDEIRTFEFMSKHGQ-GPRLLGRFHNG--RV 111 (359)
Q Consensus 44 l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~~d------r-~~E~~~l~~l~~~gl-~P~~~~~~~~g--~v 111 (359)
+..|..+.+|...+. +.+.|+|.--+.. ..-+| | .+|+.++..+...|+ +|.++..+++. ++
T Consensus 4 i~~GAEa~i~~~~~~------g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~ 77 (204)
T COG3642 4 IKQGAEAIIYLTDFL------GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIV 77 (204)
T ss_pred hhCCcceeEEeeecc------CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEE
Confidence 456777777777543 4557765532221 11112 2 479999999999999 68888888754 89
Q ss_pred EEeecCCCCCCC-CCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 112 EEFINARTLSAS-DIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 112 ~e~i~G~~l~~~-~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
||||+|..+... +-..+++++.+|+.+++||.
T Consensus 78 me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~----------------------------------------------- 110 (204)
T COG3642 78 MEYIEGELLKDALEEARPDLLREVGRLVGKLHK----------------------------------------------- 110 (204)
T ss_pred EEEeCChhHHHHHHhcchHHHHHHHHHHHHHHh-----------------------------------------------
Confidence 999999875411 00012333444444433332
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHH
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHR 270 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (359)
..+|||||.++||++.+ ++++||||..+...+-.-|.|.=+.-+-. .+.......++....
T Consensus 111 ---------~givHGDLTtsNiIl~~--~~i~~IDfGLg~~s~~~Ed~aVDl~Vler--------al~sth~~~e~l~~~ 171 (204)
T COG3642 111 ---------AGIVHGDLTTSNIILSG--GRIYFIDFGLGEFSDEVEDKAVDLHVLER--------ALESTHEKAEELFAA 171 (204)
T ss_pred ---------cCeecCCCccceEEEeC--CcEEEEECCcccccccHHhhhchHHHHHH--------HHHhccccHHHHHHH
Confidence 26799999999999987 46999999999999888888753221110 011112222577899
Q ss_pred HHHHHhhcCC
Q 018207 271 FLHAYLSSTG 280 (359)
Q Consensus 271 fl~~Y~~~~~ 280 (359)
|+++|.+..+
T Consensus 172 f~~gY~~~~~ 181 (204)
T COG3642 172 FLEGYREEFG 181 (204)
T ss_pred HHHHHHHHhc
Confidence 9999987654
No 46
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=99.32 E-value=7.6e-12 Score=108.47 Aligned_cols=67 Identities=22% Similarity=0.325 Sum_probs=51.1
Q ss_pred CceeEEeccCCCCCeeEeCCCC----ceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHH
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTK----SITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLH 273 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~----~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 273 (359)
...|+||||++++|||+..++. .+.+|||+.+++|+|++||+.++..... .+ .. .+..+.|++
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~---------~~---~r-~~~~~~ll~ 184 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLS---------VE---IR-REHFDELLK 184 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCC---------HH---HH-HHHHHHHHH
Confidence 4679999999999999985422 5889999999999999999999864321 00 00 345577888
Q ss_pred HHhh
Q 018207 274 AYLS 277 (359)
Q Consensus 274 ~Y~~ 277 (359)
.|.+
T Consensus 185 ~Y~~ 188 (196)
T smart00587 185 FYYE 188 (196)
T ss_pred HHHH
Confidence 8865
No 47
>COG4857 Predicted kinase [General function prediction only]
Probab=99.32 E-value=5.1e-12 Score=111.16 Aligned_cols=202 Identities=20% Similarity=0.198 Sum_probs=117.1
Q ss_pred CCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEE-------EeCCCcccccchH-HHHHHHHHHhc--CCCCceeEE
Q 018207 35 DRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLR-------VYGEGVEVFFDRN-DEIRTFEFMSK--HGQGPRLLG 104 (359)
Q Consensus 35 ~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlR-------i~~~~~~~~~dr~-~E~~~l~~l~~--~gl~P~~~~ 104 (359)
+...+.++.|+.|.-|-+|.|+-.. +++..|+| +.+...+..++|. .|..++..-.+ -|.+|++++
T Consensus 29 ~~s~ltvkEIGDGNlNyvF~V~~~~----~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf 104 (408)
T COG4857 29 NKSHLTVKEIGDGNLNYVFIVEGKI----GGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYF 104 (408)
T ss_pred CccceEEEEecCCceeEEEEEecCC----CCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEe
Confidence 3466899999999999999997432 35666665 4444445556663 47777765443 367899999
Q ss_pred EeCCc--eEEEeecCC-CCCCC---CCCChHHHHHHHHHHHhhc--cCCCCCCCcccchHHHHHHH-----HHhhcCCC-
Q 018207 105 RFHNG--RVEEFINAR-TLSAS---DIRDPEISALIAAKLKEFH--DLDMPGQKIVRLWDRSRNWL-----IATKNLSP- 170 (359)
Q Consensus 105 ~~~~g--~v~e~i~G~-~l~~~---~l~~~~~~~~la~~La~lH--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~- 170 (359)
.++.- .+||++.-. -+... .-.-|.+...+|..|++-- .+...... .+-...+..+. +..+.+.-
T Consensus 105 ~De~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~-k~kK~~vk~FtNpELCDItE~LVFt 183 (408)
T COG4857 105 FDEIMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNT-KDKKADVKLFTNPELCDITENLVFT 183 (408)
T ss_pred ecchhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccch-HhHHHHHHHhCCchhhcchhceeec
Confidence 98764 788887431 11110 0012456777777777532 22111000 00000000000 00000000
Q ss_pred -h-----------hhhhh-----cCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 171 -P-----------EEARA-----FRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 171 -~-----------~~~~~-----~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
| ....+ ..-+.++-++.+|++.+. .....+||||||.|-|++++ ....+||-|+|-|||
T Consensus 184 dPyfd~d~Nr~~~~~l~~fVe~L~~n~dlkvea~kLk~~F~--~~aetLiHGDLHsGSIfvte--~etkvIDPEFaFYGP 259 (408)
T COG4857 184 DPYFDADRNRHTIPQLDPFVEELRKNRDLKVEAQKLKHKFM--AYAETLIHGDLHSGSIFVTE--KETKVIDPEFAFYGP 259 (408)
T ss_pred CccccccccccccccchHHHHHHhcCcchhhhHHHHHHHHH--HHhHHHhccccccCcEEeec--CcceeeCccccccCc
Confidence 0 00000 011233444555555442 33458999999999999998 578999999999999
Q ss_pred hHHhHHHHHHHH
Q 018207 234 VAYDIANHFCEM 245 (359)
Q Consensus 234 ~~~Dla~~~~e~ 245 (359)
-+||+|+++..+
T Consensus 260 mafDiG~~iaNl 271 (408)
T COG4857 260 MAFDIGMLIANL 271 (408)
T ss_pred chhhHHHHHHHH
Confidence 999999988654
No 48
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=99.31 E-value=3.4e-10 Score=105.35 Aligned_cols=217 Identities=12% Similarity=0.050 Sum_probs=129.3
Q ss_pred CcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC--CceeEEEeCC-------c---eEEEeecCCCCCCCCCCChHHHH
Q 018207 65 SHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ--GPRLLGRFHN-------G---RVEEFINARTLSASDIRDPEISA 132 (359)
Q Consensus 65 ~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl--~P~~~~~~~~-------g---~v~e~i~G~~l~~~~l~~~~~~~ 132 (359)
++.++|+.....+.. +......++++|.+.|+ +|+++....+ | .+++|.+|+... + .
T Consensus 28 ~g~y~Lk~~e~~~~~--~l~f~~~~~~~L~~~G~~~v~~~i~tk~G~~~~~~~g~~y~L~~w~~~~~~~-----~----~ 96 (313)
T TIGR02905 28 NQAYLIVPVDGLEEE--ELAELMAMSDYLQQAGDETVLELVKTKFGQSSALIDGVSYYLFKAPEFNERR-----G----V 96 (313)
T ss_pred CceEEEEEecCCCHH--HHHHHHHHHHHHHHcCCCcccceeecCCCCEeEEECCEEEEEEeCCCcccch-----h----H
Confidence 688999987432211 12356788999999997 5777764332 2 678887765421 1 3
Q ss_pred HHHHHHHhhccCCCCCCC----cc---cchHHHHHHHHHhhcC-------CChhhhhhc-------CHHHHHHHHHHHHH
Q 018207 133 LIAAKLKEFHDLDMPGQK----IV---RLWDRSRNWLIATKNL-------SPPEEARAF-------RLDAIEEEISTLEK 191 (359)
Q Consensus 133 ~la~~La~lH~~~~~~~~----~~---~~~~~~~~~~~~~~~~-------~~~~~~~~~-------~~~~l~~~~~~l~~ 191 (359)
.+|+.||+||........ .. .....+.+..+++++. ....+.... -.+..++.++.+.+
T Consensus 97 ~~~~~LA~lH~as~~f~~~~~~~~~~~~~~~~~~k~~~el~~~~~~~~~~~~~s~Fd~~fl~~~d~~~~~a~~ai~~l~~ 176 (313)
T TIGR02905 97 DLGRELATFHKRGRQYPRPIWKKSRIGQWKELWAKRLDQLEDWWQSLLAQGPQTLFDEQFLETFPYYLGLTENAIQYAAD 176 (313)
T ss_pred HHHHHHHHHHHhcCCCCCCccccccccccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999987653211 01 1111122222222111 111111100 11222333333322
Q ss_pred -H---HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHh-hccCCCCCCCCCCCCCCCHH
Q 018207 192 -A---LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMA-ADYHTETPHLMDYSKYPDLE 266 (359)
Q Consensus 192 -~---l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~-~~~~~~~~~~~~~~~~~~~~ 266 (359)
. +.......++||||+..+|+| .+ +.+.+|+|| +.++.|..||+.++...+ .++. .+ .+
T Consensus 177 s~y~~~~~~~~~~~lCH~d~~~hn~l-~~--~~~~~i~~d-~~~D~~~~DL~~firk~~~k~~~------~~------~~ 240 (313)
T TIGR02905 177 TELDDEPGLADSGTICHERFGETTWL-ER--GGLIKPPTE-WVYDHPARDLAEWIRERYMGEIR------QN------QR 240 (313)
T ss_pred ccchhhhhccccCccccCccCccccc-cC--CCeEecccc-cccccchhHHHHHHHHHHHHhcc------cc------HH
Confidence 1 111234569999999999987 43 578899999 559999999999998754 3210 11 45
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHhhhhcccchhhHHHHHHhhc
Q 018207 267 ERHRFLHAYLSSTGDQPSDAEVKQLLQDVEKYTLASHLSWGLWGIISE 314 (359)
Q Consensus 267 ~~~~fl~~Y~~~~~~~~~~~e~~~l~~~v~~~~~~~~~~w~lWa~~~~ 314 (359)
....+|++|.+.. ++++.|.+-++. +.++.+-+|-+---...
T Consensus 241 ~~~~~l~~Y~~~~--pL~~~e~~~l~~----~L~FP~~fwk~~~~Yy~ 282 (313)
T TIGR02905 241 AIASFLQEYEQAA--PLTPFSWRLMYA----RLLFPLHYFETIENYYI 282 (313)
T ss_pred HHHHHHHHhhhcC--CCCHHHHHHHHH----HHcCcHHHHHHHHHHHh
Confidence 7889999999874 688888776665 77777777766544433
No 49
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.20 E-value=1.8e-10 Score=101.27 Aligned_cols=138 Identities=18% Similarity=0.208 Sum_probs=87.6
Q ss_pred CCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccch-------HHHHHHHHHHhcCCC-CceeEEE
Q 018207 37 NSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFDR-------NDEIRTFEFMSKHGQ-GPRLLGR 105 (359)
Q Consensus 37 ~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr-------~~E~~~l~~l~~~gl-~P~~~~~ 105 (359)
..-.++.+++|..+.||.++. +++++++|++.+.. +....+ ++|+..+..|.+.|+ .|..++.
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~------~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT------DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred ceEEEEEecCCCceEEEEEec------CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 334567788899999999764 25689999997542 112112 467778888988898 4666644
Q ss_pred eC----------CceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhh
Q 018207 106 FH----------NGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEAR 175 (359)
Q Consensus 106 ~~----------~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (359)
.. ..++|||++|.++.. + .. . + ... .
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~-----------~-------~~--~-----~---~~~---~------------- 141 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELND-----------M-------PE--I-----S---EDV---K------------- 141 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHH-----------h-------hh--c-----c---HHH---H-------------
Confidence 32 237999999986531 0 00 0 0 000 0
Q ss_pred hcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC--chHHhH
Q 018207 176 AFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN--PVAYDI 238 (359)
Q Consensus 176 ~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~--~~~~Dl 238 (359)
..+...+..+. ...++|||+||+|||++++ + +.||||...... +.+.|+
T Consensus 142 ----~~i~~~l~~lH--------~~gi~H~Dikp~Nili~~~-g-i~liDfg~~~~~~e~~a~d~ 192 (232)
T PRK10359 142 ----AKIKASIESLH--------QHGMVSGDPHKGNFIVSKN-G-LRIIDLSGKRCTAQRKAKDR 192 (232)
T ss_pred ----HHHHHHHHHHH--------HcCCccCCCChHHEEEeCC-C-EEEEECCCcccccchhhHHH
Confidence 01112222221 3389999999999999986 5 999998766544 445555
No 50
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=99.18 E-value=2e-10 Score=102.07 Aligned_cols=212 Identities=18% Similarity=0.168 Sum_probs=130.2
Q ss_pred HHHHHHHHHhcCCC-CceeEEEeC--CceEEEeecCCCCCCC-CCCChHHHHHHHHHHHhhccCCCCCC---------Cc
Q 018207 85 DEIRTFEFMSKHGQ-GPRLLGRFH--NGRVEEFINARTLSAS-DIRDPEISALIAAKLKEFHDLDMPGQ---------KI 151 (359)
Q Consensus 85 ~E~~~l~~l~~~gl-~P~~~~~~~--~g~v~e~i~G~~l~~~-~l~~~~~~~~la~~La~lH~~~~~~~---------~~ 151 (359)
.-.++...|...|+ +|+++..+. +.++.|-+...+.-.. .-...+.+...+..|+.+|....+.. ..
T Consensus 69 ~Fvai~~lL~~~Gv~vPqIla~Dld~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~~g~~~~l 148 (351)
T COG3178 69 PFVAIAGLLAGQGVRVPQILAADLDQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVREGSTHVL 148 (351)
T ss_pred HHHHHHHHHhcCCcCccHHhhhchhcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccCCCCCCcC
Confidence 45677788899999 799999874 4477787754322111 11112445677899999998765421 11
Q ss_pred ccch--------HHHHHHH-HHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCC---C
Q 018207 152 VRLW--------DRSRNWL-IATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVT---K 219 (359)
Q Consensus 152 ~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~---~ 219 (359)
|.+- +-+..|. ...... + .........++..+.|...+ ...+.|+||+|+|+.|+|++.+. .
T Consensus 149 p~fDr~am~~E~sLf~dWylpr~~g~--~--l~~~~r~~~~aiwd~Lid~~--~~~~~vlvhRDfh~~NLmw~~~~~g~~ 222 (351)
T COG3178 149 PPFDRAAMRREASLFVDWYLPRHLGR--P--LTDAERQAWEAIWDGLIDSL--LAQPKVLVHRDFHSRNLMWTADRAGAD 222 (351)
T ss_pred CcccHHHHHHHHHhhHHhhhHHHhCC--C--CCHHHHHHHHHHHHHHHHHH--hcCCceeeeccccCccceecCCccCCC
Confidence 2110 0112333 211111 0 00001223334444444433 36788999999999999998742 3
Q ss_pred ceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHHhhcC---CCCCCHHHHHHHHHHhh
Q 018207 220 SITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAYLSST---GDQPSDAEVKQLLQDVE 296 (359)
Q Consensus 220 ~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y~~~~---~~~~~~~e~~~l~~~v~ 296 (359)
++.+|||..|.+|+.+||+++++.... -.++ ++.....+..|+... |.+.+ ...+++...
T Consensus 223 rvGvlDFQDA~iGP~aYDvasL~~DAr-------------vt~~-pe~~~~~l~rY~~~r~~~g~p~d---~~~Flra~~ 285 (351)
T COG3178 223 RVGVLDFQDALIGPIAYDVASLLRDAR-------------VTWS-PERELALLDRYWAARRAAGLPFD---EAAFLRAYA 285 (351)
T ss_pred CCceeehhhhhcCcchhhHHHHHhhcc-------------ccCC-HHHHHHHHHHHHHhhhhcCCCcC---HHHHHHHHH
Confidence 799999999999999999999975321 1233 788889999999864 32333 345555554
Q ss_pred hhcccchh-hHHHHHHhhcccCCC
Q 018207 297 KYTLASHL-SWGLWGIISEHVNEI 319 (359)
Q Consensus 297 ~~~~~~~~-~w~lWa~~~~~~~~~ 319 (359)
.+..-.|+ .-++|+-+....++.
T Consensus 286 ~MgaQR~~KvlGIFaRL~~RDGKp 309 (351)
T COG3178 286 WMGAQRHLKVLGIFARLYYRDGKP 309 (351)
T ss_pred HHHHHHHhHHHHHhhhhhhccCCc
Confidence 55555555 378888887765543
No 51
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.17 E-value=9.1e-10 Score=98.43 Aligned_cols=170 Identities=20% Similarity=0.297 Sum_probs=100.1
Q ss_pred Ee-cCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-------ccc----c--c-hHHHHHHHHHHhcCCC-CceeEEEe
Q 018207 43 PV-KGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-------EVF----F--D-RNDEIRTFEFMSKHGQ-GPRLLGRF 106 (359)
Q Consensus 43 ~l-~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-------~~~----~--d-r~~E~~~l~~l~~~gl-~P~~~~~~ 106 (359)
.+ ..|..|++|+|... +.++|||.+..+. ... . . ..+|..++..|...|+ +|+++...
T Consensus 38 ~lg~~~g~gtv~~v~~~------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~ 111 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAAR 111 (239)
T ss_pred eeecCCCCccEEEEEeC------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeee
Confidence 45 36778999999863 6899999885421 000 1 1 1459999999999998 68887653
Q ss_pred C--C------ceEEEeecC-CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhc
Q 018207 107 H--N------GRVEEFINA-RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAF 177 (359)
Q Consensus 107 ~--~------g~v~e~i~G-~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (359)
. . .+|+++++| .++. ..+.+ .+. +. . .+.
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~--------------~~l~~---~~l-----~~--~---~~~--------------- 149 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLV--------------ALLQE---APL-----SE--E---QWQ--------------- 149 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHH--------------HHHhc---CCC-----CH--H---HHH---------------
Confidence 1 1 279999998 3332 11111 000 00 0 010
Q ss_pred CHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch----HHhHHHHHHHHhhccCCCC
Q 018207 178 RLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV----AYDIANHFCEMAADYHTET 253 (359)
Q Consensus 178 ~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~----~~Dla~~~~e~~~~~~~~~ 253 (359)
.+...+..+. ..+++|+|++|+|||++++ +.++||||+.+....+ .-||..+...+...+....
T Consensus 150 ---~i~~~l~~lH--------~~GI~HrDlkp~NILv~~~-~~v~LIDfg~~~~~~~~~~~~~nl~rl~rs~~~~~~~~~ 217 (239)
T PRK01723 150 ---AIGQLIARFH--------DAGVYHADLNAHNILLDPD-GKFWLIDFDRGELRTPTRWKQANLARLLRSFNKEQGKRP 217 (239)
T ss_pred ---HHHHHHHHHH--------HCCCCCCCCCchhEEEcCC-CCEEEEECCCcccCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence 1111222222 2378999999999999876 6899999999888755 3444555443333222111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhc
Q 018207 254 PHLMDYSKYPDLEERHRFLHAYLSS 278 (359)
Q Consensus 254 ~~~~~~~~~~~~~~~~~fl~~Y~~~ 278 (359)
++ .+. ......|+++|.+.
T Consensus 218 ~~-----~~~-~~~~~~~~~~y~~~ 236 (239)
T PRK01723 218 IL-----AFS-EQDWQALLAGYQAA 236 (239)
T ss_pred cc-----ccc-HHHHHHHHHHHhhh
Confidence 11 111 45677788888653
No 52
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.08 E-value=1.5e-09 Score=108.53 Aligned_cols=166 Identities=16% Similarity=0.220 Sum_probs=100.5
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC--c-ccc-----c-chHHHHHHHHHHhcCCCC-ceeEEEeC--C
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG--V-EVF-----F-DRNDEIRTFEFMSKHGQG-PRLLGRFH--N 108 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~--~-~~~-----~-dr~~E~~~l~~l~~~gl~-P~~~~~~~--~ 108 (359)
.+.|+.|.+..+|+.... +...+++..-.. . ... . ...+|..+++.+...++. |.++...+ .
T Consensus 338 ~~~iG~G~~g~Vy~~~~~------~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYL------GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cceeccCCcEEEEEEeec------CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 356778899999997653 233444332111 0 000 0 124688899999888864 55555553 3
Q ss_pred ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHH
Q 018207 109 GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEIST 188 (359)
Q Consensus 109 g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 188 (359)
.+||||++|.++.........++.++++. +..
T Consensus 412 ~lv~E~~~g~~L~~~l~~~~~~~~~i~~~------------------------------------------------L~~ 443 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLEGNPELVRKVGEI------------------------------------------------VAK 443 (535)
T ss_pred EEEEEecCCCcHHHHHHHHHHHHHHHHHH------------------------------------------------HHH
Confidence 48999999977641000000111111111 122
Q ss_pred HHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHH
Q 018207 189 LEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEER 268 (359)
Q Consensus 189 l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 268 (359)
+. ...++|+|++|+|||+++ +.+++|||+.|+.+++..|++..+........ .....+ .+..
T Consensus 444 lH--------~~giiHrDlkp~NILl~~--~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~-------~~~~~~-~~~~ 505 (535)
T PRK09605 444 LH--------KAGIVHGDLTTSNFIVRD--DRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLE-------STHYDF-EELW 505 (535)
T ss_pred HH--------hCCCccCCCChHHEEEEC--CcEEEEeCcccccCCchHhhhhhHHHHHHHhc-------CCCCCH-HHHH
Confidence 21 126899999999999954 68999999999999999999986643332111 001112 5678
Q ss_pred HHHHHHHhhc
Q 018207 269 HRFLHAYLSS 278 (359)
Q Consensus 269 ~~fl~~Y~~~ 278 (359)
+.|+++|...
T Consensus 506 ~~fl~gY~~~ 515 (535)
T PRK09605 506 EAFLEGYRET 515 (535)
T ss_pred HHHHHhhccC
Confidence 8999999553
No 53
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=98.97 E-value=3.4e-08 Score=84.24 Aligned_cols=190 Identities=17% Similarity=0.233 Sum_probs=110.2
Q ss_pred CCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC--CceeEEEe--CCc---eEEEeecCCCCCCCCCCChHHHHHHHH
Q 018207 64 FSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ--GPRLLGRF--HNG---RVEEFINARTLSASDIRDPEISALIAA 136 (359)
Q Consensus 64 ~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl--~P~~~~~~--~~g---~v~e~i~G~~l~~~~l~~~~~~~~la~ 136 (359)
+..+++||+.+.....++ +-|..-|+.+.+.+. +|+++..- ++| +|||+|+=+.+.. .+..+|+
T Consensus 34 DaG~~FvK~nr~~~~~mf--eGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime~idf~~lr~-------~~a~lG~ 104 (313)
T KOG3021|consen 34 DAGKVFVKVNRSIARDMF--EGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIMEHIDFQGLRS-------DAAKLGS 104 (313)
T ss_pred CCccEEEEeccccchHHH--hhHHHHHHHHHhcCceecCCceeeEecCCCceeeeeehhhcccchh-------HHHHHHH
Confidence 368999999765333222 368888888887654 79887654 343 8999998665542 3689999
Q ss_pred HHHhhccC-------------CCCCC---------------------CcccchHHHHHHHHHh-hcCCChh-hh--hhcC
Q 018207 137 KLKEFHDL-------------DMPGQ---------------------KIVRLWDRSRNWLIAT-KNLSPPE-EA--RAFR 178 (359)
Q Consensus 137 ~La~lH~~-------------~~~~~---------------------~~~~~~~~~~~~~~~~-~~~~~~~-~~--~~~~ 178 (359)
+||.||.- ++... ..|.+-+.-+.|..-. +..+.+. +. +...
T Consensus 105 qlAdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~edW~eFf~rhRlq~Qldl~~~~~~ 184 (313)
T KOG3021|consen 105 QLADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQEDWEEFFARHRLQPQLDLLEKTYG 184 (313)
T ss_pred HHHHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccchhhHHHHHHHHhhhHHHHHHHHhhc
Confidence 99999921 01000 0122111122343321 1111111 00 0000
Q ss_pred HHHHHHHHHH----HHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhccCCCCC
Q 018207 179 LDAIEEEIST----LEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAADYHTETP 254 (359)
Q Consensus 179 ~~~l~~~~~~----l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~ 254 (359)
-.++.+.... +.+++.....-++++||||+.||+--|+. +...|+|-- +.||++.||+|...+.
T Consensus 185 Dre~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~~-~ePiIfDPa-sfYgh~Efefgia~mf---------- 252 (313)
T KOG3021|consen 185 DREAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDGA-GEPIIFDPA-SFYGHSEFEFGIAKMF---------- 252 (313)
T ss_pred cHHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccCC-CCceEeCch-hhcCCcHHHHHHHHHh----------
Confidence 0111111122 22233333455689999999999888775 678899964 6799999999987541
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhcCCCCCC
Q 018207 255 HLMDYSKYPDLEERHRFLHAYLSSTGDQPS 284 (359)
Q Consensus 255 ~~~~~~~~~~~~~~~~fl~~Y~~~~~~~~~ 284 (359)
..++ +.|..+|.+.-+..+.
T Consensus 253 -----Ggf~-----~sF~naY~k~ipka~G 272 (313)
T KOG3021|consen 253 -----GGFT-----QSFYNAYHKKIPKAPG 272 (313)
T ss_pred -----CCCc-----HHHHHHHhhhcCCCCc
Confidence 1222 3688999876554444
No 54
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.94 E-value=1.4e-08 Score=87.35 Aligned_cols=98 Identities=20% Similarity=0.299 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhcCCC-CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHH
Q 018207 84 NDEIRTFEFMSKHGQ-GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWL 162 (359)
Q Consensus 84 ~~E~~~l~~l~~~gl-~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~ 162 (359)
++|.++|+.|.+.|+ +|+++....+.++||||+|..+.... |+. ...+ . .....
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~-------------Lkd---~~~~----~---~~~~~-- 128 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPK-------------LKD---AKLN----D---EEMKN-- 128 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEecCCEEEEEEcCCCCccchh-------------hhc---cccC----H---HHHHH--
Confidence 379999999999998 79999988888999999885332111 110 0000 0 00000
Q ss_pred HHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 163 IATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.+.+.+..+...+ ....+|||||.+.|||+.+ ++++||||..|-
T Consensus 129 ------------------i~~~i~~~l~~l~----H~~glVHGDLs~~NIL~~~--~~v~iIDF~qav 172 (197)
T cd05146 129 ------------------AYYQVLSMMKQLY----KECNLVHADLSEYNMLWHD--GKVWFIDVSQSV 172 (197)
T ss_pred ------------------HHHHHHHHHHHHH----HhCCeecCCCCHHHEEEEC--CcEEEEECCCce
Confidence 0111222222221 1238999999999999986 579999998654
No 55
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.91 E-value=5e-08 Score=84.39 Aligned_cols=135 Identities=17% Similarity=0.167 Sum_probs=85.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccc---hHHHHHHHHHHhcCCCCceeEEEeCCceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFD---RNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~d---r~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i 115 (359)
.+.+..|.-.++|.+.. .+.+++.|-...... ..+. ..+|+++++.|......|+++.......+|+||
T Consensus 7 ~~~l~~~~f~~v~~~~~------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI 80 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYL 80 (218)
T ss_pred ceeecCCCcceEEEeec------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeee
Confidence 35666677788887753 267777665543321 1111 147999999998776789998876667999999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.+|... .+.. + . .+..+ +...+..+
T Consensus 81 ~G~~L~~~----------------------~~~~--~-----~-~~~~q-----------------i~~~L~~l------ 107 (218)
T PRK12274 81 AGAAMYQR----------------------PPRG--D-----L-AYFRA-----------------ARRLLQQL------ 107 (218)
T ss_pred cCccHHhh----------------------hhhh--h-----H-HHHHH-----------------HHHHHHHH------
Confidence 99765210 0000 0 0 01111 11112222
Q ss_pred CCCceeEEeccC-CCCCeeEeCCCCceEEEEEeeccCCchHHh
Q 018207 196 NDQHIGFCHNDL-QYGNIMIDEVTKSITLIDYEYASYNPVAYD 237 (359)
Q Consensus 196 ~~~~~vl~HgDl-~~~Nil~~~~~~~v~lIDwE~a~~~~~~~D 237 (359)
....++|+|+ +|+|||++++ +.+.||||..|...++--.
T Consensus 108 --H~~GIvHrDL~kp~NILv~~~-g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 108 --HRCGVAHNDLAKEANWLVQED-GSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred --HHCcCccCCCCCcceEEEcCC-CCEEEEECCCceecCCcch
Confidence 1237999999 6999999876 7899999999987776433
No 56
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=98.91 E-value=1.3e-07 Score=92.80 Aligned_cols=193 Identities=18% Similarity=0.213 Sum_probs=109.9
Q ss_pred eEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC--CceeEEEe----CCc---
Q 018207 39 LQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ--GPRLLGRF----HNG--- 109 (359)
Q Consensus 39 ~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl--~P~~~~~~----~~g--- 109 (359)
..++.+++..||++..+ ++++|+|+|+.-.. .++ =|.++.++|.+.|. +|++++.. .+|
T Consensus 168 ~~~r~l~~EQSNtSi~~---------g~~~ilKlyRrl~~-G~n--Pe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~ 235 (528)
T TIGR02457 168 PEVRLLSAEQSNSSLVV---------GDRVVLKLYRKVEP-GIN--PEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPH 235 (528)
T ss_pred CceeecCCCcCceEEEE---------CCEEEEEEecccCC-CCC--cchHHHHHHHhCCCccCCcccEEEEEEcCCCCEE
Confidence 35678888899999888 58999999975322 233 36778888988876 68877653 232
Q ss_pred ---eEEEeecCCC--CC----C-------------------CC-CC-ChHHHHHHHHHHHhhccCCC------CCCCccc
Q 018207 110 ---RVEEFINART--LS----A-------------------SD-IR-DPEISALIAAKLKEFHDLDM------PGQKIVR 153 (359)
Q Consensus 110 ---~v~e~i~G~~--l~----~-------------------~~-l~-~~~~~~~la~~La~lH~~~~------~~~~~~~ 153 (359)
++.+||++.. .. . .+ +. -.+.++.+|+..|.||..-. ...+.|-
T Consensus 236 tla~lq~fV~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~pep~ 315 (528)
T TIGR02457 236 TLGLLQGYVQNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAPEPI 315 (528)
T ss_pred eeehHhhhhCCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 5778887531 00 0 00 00 02457899999999996321 1112221
Q ss_pred chHHHHHHHHHhhcC-------CC------hhhhhhcCHHHHHHHHHHHHHHHh---c--CCCceeEEeccCCCCCeeEe
Q 018207 154 LWDRSRNWLIATKNL-------SP------PEEARAFRLDAIEEEISTLEKALY---R--NDQHIGFCHNDLQYGNIMID 215 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~l~~~~~~l~~~l~---~--~~~~~vl~HgDl~~~Nil~~ 215 (359)
.......|.+.+... +. +.... ...+.+...-+.+...+. . ......=||||+|.||+|++
T Consensus 316 ~~~~~~~~~~~~~~~~~~a~~~L~~~~~~l~~~~~-~~~~~l~~~~~~l~~~~~~l~~~~~~~~k~RiHGD~HLgqvL~t 394 (528)
T TIGR02457 316 STLYQRSWYQDMRAQAERALQLLAQSRDGLPAAAR-ALADRLLAQRKELAAHLRPLVKREIDGLKIRIHGDFHLGQVLVV 394 (528)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhhccCChhHH-HHHHHHHHHHHHHHHHHHHHhhcCCCcceEeEecCcchhcEEEe
Confidence 122233333322211 00 00000 001122222222222221 1 12234559999999999999
Q ss_pred CCCCceEEEEEeec---------cCCchHHhHHHHHHHHh
Q 018207 216 EVTKSITLIDYEYA---------SYNPVAYDIANHFCEMA 246 (359)
Q Consensus 216 ~~~~~v~lIDwE~a---------~~~~~~~Dla~~~~e~~ 246 (359)
++ ..+|||||-= ....|.-|+|.++.++.
T Consensus 395 ~~--d~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGMLRSf~ 432 (528)
T TIGR02457 395 QD--DAVLIDFEGEPARPLAERRAKRSPLRDVAGMLRSFD 432 (528)
T ss_pred CC--CeEEEcCCCCCCCChHHhccCCChHHHHHHHHHHHH
Confidence 74 5679999861 34578899999887653
No 57
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.90 E-value=1.5e-08 Score=87.38 Aligned_cols=134 Identities=19% Similarity=0.268 Sum_probs=81.5
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccc---------------------------hHHHHHHHHHHhc
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFD---------------------------RNDEIRTFEFMSK 95 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~d---------------------------r~~E~~~l~~l~~ 95 (359)
.|+.|....+|+.... .++.+++|+...+.....+ ...|.+++..+..
T Consensus 4 ~ig~G~~~~Vy~a~~~-----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 4 CISTGKEANVYHATTA-----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred ccccccceEEEEEECC-----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888999999753 2789999998654211000 1248899999988
Q ss_pred CCC-CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhh
Q 018207 96 HGQ-GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEA 174 (359)
Q Consensus 96 ~gl-~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
.|+ .|.++......+||||++|..+.... + .... .+ ...+..+..
T Consensus 79 ~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~-------------~---~~~~------~~-~~~~~~i~~----------- 124 (190)
T cd05147 79 AGIPCPEPILLKSHVLVMEFIGDDGWAAPR-------------L---KDAP------LS-ESKARELYL----------- 124 (190)
T ss_pred CCCCCCcEEEecCCEEEEEEeCCCCCcchh-------------h---hcCC------CC-HHHHHHHHH-----------
Confidence 776 56666555567999999996432100 0 0000 01 011111111
Q ss_pred hhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 175 RAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 175 ~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
++...+..+ . ....++|+|++|+|||+++ +.++||||..|.
T Consensus 125 ------qi~~~L~~l---~----H~~giiHrDlkP~NIli~~--~~v~LiDFG~a~ 165 (190)
T cd05147 125 ------QVIQIMRIL---Y----QDCRLVHADLSEYNLLYHD--GKLYIIDVSQSV 165 (190)
T ss_pred ------HHHHHHHHH---H----HhCCcccCCCCHHHEEEEC--CcEEEEEccccc
Confidence 111112221 1 1236999999999999985 579999999876
No 58
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.90 E-value=3.8e-08 Score=89.16 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=48.0
Q ss_pred ceeEEeccCCCCCeeEeC------CCCceEEEEEeeccC--C----chHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHH
Q 018207 199 HIGFCHNDLQYGNIMIDE------VTKSITLIDYEYASY--N----PVAYDIANHFCEMAADYHTETPHLMDYSKYPDLE 266 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~------~~~~v~lIDwE~a~~--~----~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~ 266 (359)
..+++|||++++|||++. +...+++||+|.+.. . .+.-||+.+....+ +. .+. ..
T Consensus 156 ~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~~~~~~~~~r~~dL~~L~~s~~-----------~~-~ls-~~ 222 (268)
T PRK15123 156 AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQIRARVPRRWRDKDLAGLYFSAM-----------DI-GLT-QR 222 (268)
T ss_pred HCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccccCCCChHHHHHHHHHHHHHhc-----------cc-CCC-HH
Confidence 348999999999999975 135789999998833 2 44689998865431 10 122 67
Q ss_pred HHHHHHHHHhh
Q 018207 267 ERHRFLHAYLS 277 (359)
Q Consensus 267 ~~~~fl~~Y~~ 277 (359)
.+..|+.+|..
T Consensus 223 d~~~fl~~Y~~ 233 (268)
T PRK15123 223 DILRFLRVYFG 233 (268)
T ss_pred HHHHHHHHHhC
Confidence 88899999976
No 59
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.90 E-value=3.2e-08 Score=85.32 Aligned_cols=138 Identities=19% Similarity=0.197 Sum_probs=85.9
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccccc---------------------------chHHHHHHHHHHh
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFF---------------------------DRNDEIRTFEFMS 94 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~---------------------------dr~~E~~~l~~l~ 94 (359)
.+|+.|....+|++... ++..+++|+......... ....|..++..+.
T Consensus 3 ~~ig~G~~~~Vy~a~~~-----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 3 GCISTGKEANVYHARTG-----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred ceeecCCCcEEEEEEcC-----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 35778889999999753 278999999875421100 0136788888888
Q ss_pred cCCC-CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhh
Q 018207 95 KHGQ-GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEE 173 (359)
Q Consensus 95 ~~gl-~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
..|+ .|.++......+||||++|..+... .+.. ... + ......+..
T Consensus 78 ~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~-------------~l~~---~~~------~-~~~~~~i~~---------- 124 (190)
T cd05145 78 EAGVPVPEPILLKKNVLVMEFIGDDGSPAP-------------RLKD---VPL------E-EEEAEELYE---------- 124 (190)
T ss_pred hCCCCCceEEEecCCEEEEEEecCCCchhh-------------hhhh---ccC------C-HHHHHHHHH----------
Confidence 8887 5888777667799999999743210 0110 011 0 001111111
Q ss_pred hhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 174 ARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 174 ~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
.+...+..+.. ...++|+|++|+||+++ + +.++||||..|..-+
T Consensus 125 -------~l~~~l~~lH~-------~~givHrDlkP~NIll~-~-~~~~liDFG~a~~~~ 168 (190)
T cd05145 125 -------QVVEQMRRLYQ-------EAGLVHGDLSEYNILYH-D-GKPYIIDVSQAVELD 168 (190)
T ss_pred -------HHHHHHHHHHH-------hCCEecCCCChhhEEEE-C-CCEEEEEcccceecC
Confidence 11112222211 13899999999999998 3 689999999887643
No 60
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.87 E-value=2.1e-08 Score=88.79 Aligned_cols=130 Identities=21% Similarity=0.268 Sum_probs=91.1
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc--------------------cch---HHHHHHHHHHhcCCC-
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF--------------------FDR---NDEIRTFEFMSKHGQ- 98 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~--------------------~dr---~~E~~~l~~l~~~gl- 98 (359)
.|+-|=...+|.+..+ .+.++++|+.+.+...+ +.| ++|.++|+.|...|.
T Consensus 98 ~IGvGKEsdVY~~~~~-----~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 98 KIGVGKESDVYVAIDP-----KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred ccccCccceEEEEECC-----CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4556888899999764 37899999986652111 112 579999999999976
Q ss_pred CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcC
Q 018207 99 GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFR 178 (359)
Q Consensus 99 ~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
+|+++....+..|||+|+|.+|....+ + ..+|.
T Consensus 173 VP~P~~~nRHaVvMe~ieG~eL~~~r~-~---------------------~en~~------------------------- 205 (304)
T COG0478 173 VPKPIAWNRHAVVMEYIEGVELYRLRL-D---------------------VENPD------------------------- 205 (304)
T ss_pred CCCccccccceeeeehcccceeecccC-c---------------------ccCHH-------------------------
Confidence 899999999999999999987753211 0 00010
Q ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 179 LDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 179 ~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
+.+...++.+.... ..+++||||++-|||++++ +.+++|||-.+-.
T Consensus 206 -~il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~d-g~~~vIDwPQ~v~ 251 (304)
T COG0478 206 -EILDKILEEVRKAY-----RRGIVHGDLSEFNILVTED-GDIVVIDWPQAVP 251 (304)
T ss_pred -HHHHHHHHHHHHHH-----HcCccccCCchheEEEecC-CCEEEEeCccccc
Confidence 01122222333322 3489999999999999997 7899999987653
No 61
>smart00090 RIO RIO-like kinase.
Probab=98.86 E-value=2.1e-07 Score=83.10 Aligned_cols=140 Identities=21% Similarity=0.273 Sum_probs=86.8
Q ss_pred EEecCCcceeEEEEE-eCCCCCCCCcEEEEEEeCCCcccc-------------------------cchHHHHHHHHHHhc
Q 018207 42 IPVKGAMTNEVFQIK-WLTKTETFSHKVLLRVYGEGVEVF-------------------------FDRNDEIRTFEFMSK 95 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~-~~~~~~~~~~~~vlRi~~~~~~~~-------------------------~dr~~E~~~l~~l~~ 95 (359)
++|+.|....+|++. ... .+..+++|+........ .....|..++..+..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~----~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 34 GCISTGKEANVYHALDFDG----SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred CeeccCcceeEEEEEecCC----CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 567788889999996 221 36889999876432100 001469999999987
Q ss_pred CCC-CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhh
Q 018207 96 HGQ-GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEA 174 (359)
Q Consensus 96 ~gl-~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
.++ .|+++......+||||++|..+....+ +. .+ .. ......+.
T Consensus 110 ~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~----------------~~--~~----~~-~~~~~~i~------------ 154 (237)
T smart00090 110 AGVPVPKPIAWRRNVLVMEFIGGDGLPAPRL----------------KD--VE----PE-EEEEFELY------------ 154 (237)
T ss_pred cCCCCCeeeEecCceEEEEEecCCccccccc----------------cc--CC----cc-hHHHHHHH------------
Confidence 776 688887766779999999976642100 00 00 00 00011111
Q ss_pred hhcCHHHHHHHHHHHHHHHhcCCCcee-EEeccCCCCCeeEeCCCCceEEEEEeecc-CCchH
Q 018207 175 RAFRLDAIEEEISTLEKALYRNDQHIG-FCHNDLQYGNIMIDEVTKSITLIDYEYAS-YNPVA 235 (359)
Q Consensus 175 ~~~~~~~l~~~~~~l~~~l~~~~~~~v-l~HgDl~~~Nil~~~~~~~v~lIDwE~a~-~~~~~ 235 (359)
..+...+..+. ... +||+|++|+||+++ + +.++||||..|. .+.|.
T Consensus 155 -----~qi~~~l~~LH--------~~g~iiH~Dikp~NIli~-~-~~i~LiDFg~a~~~~~~~ 202 (237)
T smart00090 155 -----DDILEEMRKLY--------KEGELVHGDLSEYNILVH-D-GKVVIIDVSQSVELDHPM 202 (237)
T ss_pred -----HHHHHHHHHHH--------hcCCEEeCCCChhhEEEE-C-CCEEEEEChhhhccCCcc
Confidence 11112222221 224 89999999999998 3 689999999888 44444
No 62
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.85 E-value=5e-08 Score=81.49 Aligned_cols=174 Identities=17% Similarity=0.116 Sum_probs=100.7
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc------ccccc--h-HHHHHHHHHHhcCCC-CceeEEEeCC-
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV------EVFFD--R-NDEIRTFEFMSKHGQ-GPRLLGRFHN- 108 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~------~~~~d--r-~~E~~~l~~l~~~gl-~P~~~~~~~~- 108 (359)
.+..+..|....+++.... |+.+|+|.-.+.. +.-+. | .+|++.+..+...|+ +|+++..+..
T Consensus 11 ~l~likQGAEArv~~~~~~------Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~ 84 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS------GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG 84 (229)
T ss_pred cceeeeccceeeEeeeccC------CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 5677888888888888753 6888887543221 11111 2 579999999999999 7999998864
Q ss_pred -ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHH
Q 018207 109 -GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEIS 187 (359)
Q Consensus 109 -g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 187 (359)
.+.||||+|-+... ..+ .-|..+. ..+ .. +.+...
T Consensus 85 ~~i~ME~~~g~~~vk-------------~~i-~~~~~~~---~~d---~~------------------------~~~~~~ 120 (229)
T KOG3087|consen 85 GQIYMEFIDGASTVK-------------DFI-LSTMEDE---SED---EG------------------------LAELAR 120 (229)
T ss_pred CeEEEEeccchhHHH-------------HHH-HHHccCc---ccc---hh------------------------HHHHHH
Confidence 48999999843110 000 0000000 000 00 011111
Q ss_pred HHHHHHhcCCCceeEEeccCCCCCeeEeCCCCce--EEEEEeeccCCc----hHHhHHHHHHHHhhccCCCCCCCCCCCC
Q 018207 188 TLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSI--TLIDYEYASYNP----VAYDIANHFCEMAADYHTETPHLMDYSK 261 (359)
Q Consensus 188 ~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v--~lIDwE~a~~~~----~~~Dla~~~~e~~~~~~~~~~~~~~~~~ 261 (359)
.+-+.+ ..-....+|||||..+|||+.++++++ .+|||..+.+.- .+.||=.+=. .. .+.
T Consensus 121 ~iG~~i-gklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~EDKgVDLYVlEr-A~------------lsT 186 (229)
T KOG3087|consen 121 RIGELI-GKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLPEDKGVDLYVLER-AV------------LST 186 (229)
T ss_pred HHHHHH-HHhhhCCeecccccccceEEecCCCcCceEEEeecchhcccCcccccceeeeehH-hH------------hcc
Confidence 111111 112334789999999999998776665 799999887663 3444422110 00 111
Q ss_pred CC-CHHHHHHHHHHHhh
Q 018207 262 YP-DLEERHRFLHAYLS 277 (359)
Q Consensus 262 ~~-~~~~~~~fl~~Y~~ 277 (359)
.| .....+.|+++|..
T Consensus 187 h~~~~~~fe~~~~~Y~~ 203 (229)
T KOG3087|consen 187 HDKKALLFEGFLEGYRA 203 (229)
T ss_pred CcccHHHHHHHHHHHHh
Confidence 22 14456899999973
No 63
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.82 E-value=3.8e-08 Score=86.01 Aligned_cols=130 Identities=25% Similarity=0.401 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhcCCC-CceeEEEeCC--------ceEEEeecCC-CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCccc
Q 018207 84 NDEIRTFEFMSKHGQ-GPRLLGRFHN--------GRVEEFINAR-TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVR 153 (359)
Q Consensus 84 ~~E~~~l~~l~~~gl-~P~~~~~~~~--------g~v~e~i~G~-~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~ 153 (359)
.+|...+..|.+.|+ +|++++.... .+|+|+++|. ++ ...+...+. . . +.
T Consensus 59 ~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L--------------~~~~~~~~~--~-~---~~ 118 (206)
T PF06293_consen 59 KREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDL--------------RDLLQQWEQ--L-D---PS 118 (206)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccH--------------HHHHHhhcc--c-c---hh
Confidence 479999999999999 6988876532 2688888873 22 122222222 0 0 00
Q ss_pred chHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCC---ceEEEEEeecc
Q 018207 154 LWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTK---SITLIDYEYAS 230 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~---~v~lIDwE~a~ 230 (359)
.....+ ..+.+.+..+ ...+++|+|++++|||++++ + .+++||||.+.
T Consensus 119 ---~~~~ll-----------------~~l~~~i~~l--------H~~gi~H~Dl~~~NILv~~~-~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 119 ---QRRELL-----------------RALARLIAKL--------HDAGIYHGDLNPSNILVDPD-DGQYRFYLIDLDRMR 169 (206)
T ss_pred ---hHHHHH-----------------HHHHHHHHHH--------HHCcCCCCCCCcccEEEeCC-CCceeEEEEcchhce
Confidence 000000 1122222222 23489999999999999986 4 68999999998
Q ss_pred CCc-----hHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 018207 231 YNP-----VAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRFLHAY 275 (359)
Q Consensus 231 ~~~-----~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~Y 275 (359)
... ..-||+.+..... ...+. .+.+..|+++|
T Consensus 170 ~~~~~~~~~~~dL~~L~rs~~------------~~~~~-~~d~~~fl~~Y 206 (206)
T PF06293_consen 170 FRPSSRRWRAKDLARLLRSLL------------RSGWS-ERDRQRFLRGY 206 (206)
T ss_pred eCCCChHHHHHhHHHHHHhcc------------ccCCC-HHHHHHHHhhC
Confidence 877 4678887765321 11222 78889999988
No 64
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.77 E-value=2.7e-08 Score=85.17 Aligned_cols=97 Identities=26% Similarity=0.407 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhcCCC-CceeEEEeCCceEEEeec--CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHH
Q 018207 84 NDEIRTFEFMSKHGQ-GPRLLGRFHNGRVEEFIN--ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRN 160 (359)
Q Consensus 84 ~~E~~~l~~l~~~gl-~P~~~~~~~~g~v~e~i~--G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~ 160 (359)
++|..+|..|.+.|+ +|+++....+.+|||||+ |.++.. +. ..... . .. ..
T Consensus 56 ~~E~~~L~~l~~~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~--l~----------------~~~~~-~--~~----~~- 109 (188)
T PF01163_consen 56 KKEFRNLKRLYEAGVPVPKPYDYNRNVIVMEYIGEDGVPLPR--LK----------------DVDLS-P--EE----PK- 109 (188)
T ss_dssp HHHHHHHHHCCCTT-SS--EEEEETTEEEEE--EETTEEGGC--HH----------------HCGGG-G--ST----HH-
T ss_pred HHHHHHHHHHHHCCccCCcEEEEeCCEEEEEecCCCccchhh--HH----------------hcccc-c--hh----HH-
Confidence 479999999999997 899999988999999999 765431 00 00000 0 00 00
Q ss_pred HHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 161 WLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..+.+.+..+...+. ...++||||++.|||++++ ++++|||+.+..
T Consensus 110 -------------------~~~~~il~~~~~~~~----~~givHGDLs~~NIlv~~~--~~~iIDf~qav~ 155 (188)
T PF01163_consen 110 -------------------ELLEEILEEIIKMLH----KAGIVHGDLSEYNILVDDG--KVYIIDFGQAVD 155 (188)
T ss_dssp -------------------HHHHHHHHHHHHHHH----CTTEEESS-STTSEEEETT--CEEE--GTTEEE
T ss_pred -------------------HHHHHHHHHHHHHHH----hcCceecCCChhhEEeecc--eEEEEecCccee
Confidence 111222222333221 2389999999999999984 899999987653
No 65
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.72 E-value=1.4e-07 Score=80.87 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=51.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccc-------------------------hHHHHHHHHHHhcC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFD-------------------------RNDEIRTFEFMSKH 96 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-------------------------r~~E~~~l~~l~~~ 96 (359)
+.|+.|....+|++... ++..+++|++......... ...|...+..+...
T Consensus 3 ~~lg~G~~g~Vy~a~~~-----~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 3 GPIGTGKEADVYLALDG-----DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred cccccccceeEEEEECC-----CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 34677888999999753 2688999987653211000 03466677777777
Q ss_pred CC-CceeEEEeCCceEEEeecCCCC
Q 018207 97 GQ-GPRLLGRFHNGRVEEFINARTL 120 (359)
Q Consensus 97 gl-~P~~~~~~~~g~v~e~i~G~~l 120 (359)
++ +|+++......+++||++|..+
T Consensus 78 ~~~~~~~~~~~~~~lv~e~~~g~~~ 102 (187)
T cd05119 78 GVPVPKPIDLNRHVLVMEFIGGDGI 102 (187)
T ss_pred CCCCCceEecCCCEEEEEEeCCCCc
Confidence 65 7888887777899999999653
No 66
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.69 E-value=5.9e-07 Score=78.00 Aligned_cols=128 Identities=24% Similarity=0.271 Sum_probs=74.8
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-------ccc---hHHHHHHHHHHhcCCCC---ceeEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-------FFD---RNDEIRTFEFMSKHGQG---PRLLGRF 106 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-------~~d---r~~E~~~l~~l~~~gl~---P~~~~~~ 106 (359)
.++.+....-|.|.+++. ++++||+|.+.+.... ++. -.++......+.+.|+. +..+...
T Consensus 35 ~~kv~k~~~r~~ValIei------~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 35 IIKVFKNTKRNYVALIEI------DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred EEEeecCCCccEEEEEEE------CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 446666666677777875 3799999998764311 110 12334444555666762 2222222
Q ss_pred C--------CceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcC
Q 018207 107 H--------NGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFR 178 (359)
Q Consensus 107 ~--------~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
. ..+++|||+|.++... .+ .+ +...
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~--~~------------------i~----e~~~----------------------- 141 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDI--ED------------------ID----EDLA----------------------- 141 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccc--hh------------------cC----HHHH-----------------------
Confidence 1 1379999999987631 00 00 0000
Q ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 179 LDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 179 ~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
+.+.+.+.++.+ .++.|||+||+|+++++ +++.+||+...+.
T Consensus 142 -~ki~~~ikqlH~--------~G~~HGD~hpgNFlv~~--~~i~iID~~~k~~ 183 (229)
T PF06176_consen 142 -EKIVEAIKQLHK--------HGFYHGDPHPGNFLVSN--NGIRIIDTQGKRM 183 (229)
T ss_pred -HHHHHHHHHHHH--------cCCccCCCCcCcEEEEC--CcEEEEECccccc
Confidence 112222333322 27899999999999997 4699999986654
No 67
>PRK09902 hypothetical protein; Provisional
Probab=98.69 E-value=4.7e-07 Score=78.27 Aligned_cols=63 Identities=11% Similarity=0.090 Sum_probs=47.2
Q ss_pred ceeEEeccCCCCCeeEeCCCCc--eEEEEEeeccCCc-----hHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHH
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKS--ITLIDYEYASYNP-----VAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRF 271 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~--v~lIDwE~a~~~~-----~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~f 271 (359)
...++|+|+.+.||+++.+ ++ +.|||||-+.... ..-||..+.... ..++ +.++..|
T Consensus 146 ~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r~~l~~~~~~~~Dl~~l~r~~--------------~~~s-~~~~~~~ 209 (216)
T PRK09902 146 SVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYL--------------EPIP-KADWEQV 209 (216)
T ss_pred HCCCcCCCCCHhheeecCC-CCeeEEEEEhhccchhhhhhhhhHhHHHHHHHhc--------------cCCC-HHHHHHH
Confidence 3489999999999999854 45 8999999887544 467888775321 1122 7889999
Q ss_pred HHHHhh
Q 018207 272 LHAYLS 277 (359)
Q Consensus 272 l~~Y~~ 277 (359)
+.+|+.
T Consensus 210 ~~~y~~ 215 (216)
T PRK09902 210 KAYYYA 215 (216)
T ss_pred HHHHhc
Confidence 999964
No 68
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.67 E-value=3.5e-07 Score=79.31 Aligned_cols=129 Identities=22% Similarity=0.233 Sum_probs=81.7
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-----------------------cchHHHHHHHHHHhcCCC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-----------------------FDRNDEIRTFEFMSKHGQ 98 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-----------------------~dr~~E~~~l~~l~~~gl 98 (359)
++|+.|....+|++... ++..+++|+...+.... .....|..++..+...++
T Consensus 21 ~~i~~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 21 NQIGVGKESDVYLALDP-----DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred CccccCcceEEEEEEcC-----CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 56888888999999753 26889999754321100 012457778888877654
Q ss_pred -CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhc
Q 018207 99 -GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAF 177 (359)
Q Consensus 99 -~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (359)
.|+++......++|||++|.++... ... +. ......
T Consensus 96 ~v~~~~~~~~~~lv~e~~~g~~L~~~------------------~~~-------~~----~~~~~~-------------- 132 (198)
T cd05144 96 PVPKPIDWNRHAVVMEYIDGVELYRV------------------RVL-------ED----PEEVLD-------------- 132 (198)
T ss_pred CCCceeecCCceEEEEEeCCcchhhc------------------ccc-------cc----HHHHHH--------------
Confidence 6888776667799999999765311 000 00 000010
Q ss_pred CHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 178 RLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 178 ~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.+...+..+. ...++|+|++|+||+++++ +.+.||||..|.
T Consensus 133 ---~i~~~l~~lh--------~~gi~H~Dl~p~Nill~~~-~~~~liDfg~~~ 173 (198)
T cd05144 133 ---EILEEIVKAY--------KHGIIHGDLSEFNILVDDD-EKIYIIDWPQMV 173 (198)
T ss_pred ---HHHHHHHHHH--------HCCCCcCCCCcccEEEcCC-CcEEEEECCccc
Confidence 0111111111 1479999999999999875 789999999774
No 69
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.58 E-value=4.4e-07 Score=85.70 Aligned_cols=141 Identities=19% Similarity=0.203 Sum_probs=87.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-----c-cccchHHHHHHHHHHhcCCCCceeEEEeCCceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-----E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-----~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~ 114 (359)
...|+.|....+|++..... .+..+.+|...... . ......+|..+++.|...++.|+++......++|||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE~ 99 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGD---PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVRGW 99 (365)
T ss_pred ccEEeecCcEEEEEEEEcCC---CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEEc
Confidence 45677788899999975421 13455676543221 1 011135799999999988888888776556799999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.+|.. ++ +.. . ..|+.+ +.+.+..+.
T Consensus 100 ~~G~~L~~------------------~~----~~~---~-----~~~~~~-----------------i~~aL~~lH---- 128 (365)
T PRK09188 100 TEGVPLHL------------------AR----PHG---D-----PAWFRS-----------------AHRALRDLH---- 128 (365)
T ss_pred cCCCCHHH------------------hC----ccc---h-----HHHHHH-----------------HHHHHHHHH----
Confidence 99965520 00 000 0 112111 112222222
Q ss_pred cCCCceeEEeccC-CCCCeeEeCCCCceEEEEEeeccCCchHHhHHH
Q 018207 195 RNDQHIGFCHNDL-QYGNIMIDEVTKSITLIDYEYASYNPVAYDIAN 240 (359)
Q Consensus 195 ~~~~~~vl~HgDl-~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~ 240 (359)
...++|+|+ +|+|||++.+ +.++|+||..|..-.+.-.++.
T Consensus 129 ----~~gIiHrDL~KP~NILv~~~-~~ikLiDFGlA~~~~~~~~~~~ 170 (365)
T PRK09188 129 ----RAGITHNDLAKPQNWLMGPD-GEAAVIDFQLASVFRRRGALYR 170 (365)
T ss_pred ----HCCCeeCCCCCcceEEEcCC-CCEEEEECccceecccCcchhh
Confidence 238899999 8999999875 6899999999885554444443
No 70
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.58 E-value=3.3e-07 Score=89.12 Aligned_cols=140 Identities=20% Similarity=0.244 Sum_probs=85.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc---------------------------------------
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF--------------------------------------- 80 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~--------------------------------------- 80 (359)
.-++++.|....||+.+.. +|+.++||+-.++....
T Consensus 121 d~~plasaSigQVh~A~l~-----~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 195 (437)
T TIGR01982 121 EEKPLAAASIAQVHRARLV-----DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLR 195 (437)
T ss_pred CCcceeeeehhheEEEEec-----CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHH
Confidence 3478999999999999875 37899999987652110
Q ss_pred --cchHHHHHHHHHHhcC-----CC-CceeEEEe--CCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCC
Q 018207 81 --FDRNDEIRTFEFMSKH-----GQ-GPRLLGRF--HNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQK 150 (359)
Q Consensus 81 --~dr~~E~~~l~~l~~~-----gl-~P~~~~~~--~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~ 150 (359)
+|...|++++..+.+. ++ .|+++... ...++|||++|.++... .. +....
T Consensus 196 ~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~--------~~-------~~~~~----- 255 (437)
T TIGR01982 196 RELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDI--------AA-------LDEAG----- 255 (437)
T ss_pred HHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccH--------HH-------HHhcC-----
Confidence 1223456666665532 23 58877543 34589999999887521 00 00000
Q ss_pred cccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 151 IVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.+ ...+. . . .+...+..+ . ...++|+|+||+||+++++ +.+++|||..++
T Consensus 256 -~~-~~~ia---~---~-------------~~~~~l~ql---~-----~~g~~H~D~hPgNilv~~~-g~i~liDfG~~~ 305 (437)
T TIGR01982 256 -LD-RKALA---E---N-------------LARSFLNQV---L-----RDGFFHADLHPGNIFVLKD-GKIIALDFGIVG 305 (437)
T ss_pred -CC-HHHHH---H---H-------------HHHHHHHHH---H-----hCCceeCCCCcccEEECCC-CcEEEEeCCCee
Confidence 00 00010 0 0 000011111 1 2378999999999999886 789999999998
Q ss_pred CCch
Q 018207 231 YNPV 234 (359)
Q Consensus 231 ~~~~ 234 (359)
.-++
T Consensus 306 ~l~~ 309 (437)
T TIGR01982 306 RLSE 309 (437)
T ss_pred ECCH
Confidence 7665
No 71
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.51 E-value=2.6e-06 Score=74.96 Aligned_cols=134 Identities=22% Similarity=0.296 Sum_probs=86.8
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-----------------cch--------HHHHHHHHHHhcCC
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-----------------FDR--------NDEIRTFEFMSKHG 97 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-----------------~dr--------~~E~~~l~~l~~~g 97 (359)
+|+.|-...+|+.... ++..+.+|+|...+..+ .++ .+|...|..+.+.|
T Consensus 55 ~istGKEA~Vy~a~~~-----~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAG 129 (268)
T COG1718 55 CISTGKEANVYLAETG-----DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAG 129 (268)
T ss_pred eecCCcceEEEeeccC-----CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5677888889997642 36788899997643111 111 46899999999999
Q ss_pred C-CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhh
Q 018207 98 Q-GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARA 176 (359)
Q Consensus 98 l-~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
+ +|+++....+-+|||||+..-.....+.+ .+. .+. .....
T Consensus 130 VrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkD------------------v~~--e~~---e~~~~--------------- 171 (268)
T COG1718 130 VRVPEPIAFRNNVLVMEFIGDDGLPAPRLKD------------------VPL--ELE---EAEGL--------------- 171 (268)
T ss_pred CCCCCceeecCCeEEEEeccCCCCCCCCccc------------------CCc--Cch---hHHHH---------------
Confidence 9 89999999999999999765222212222 000 010 01100
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 177 FRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 177 ~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
++.+.+.+..|.. ...++||||..-|||+.+ +.++||||--|.
T Consensus 172 --~~~~v~~~~~l~~-------~a~LVHgDLSEyNiL~~~--~~p~iID~~QaV 214 (268)
T COG1718 172 --YEDVVEYMRRLYK-------EAGLVHGDLSEYNILVHD--GEPYIIDVSQAV 214 (268)
T ss_pred --HHHHHHHHHHHHH-------hcCcccccchhhheEEEC--CeEEEEECcccc
Confidence 1112222222222 237899999999999995 689999998775
No 72
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.39 E-value=7.9e-06 Score=72.68 Aligned_cols=138 Identities=23% Similarity=0.271 Sum_probs=79.3
Q ss_pred ChHHHHHHHHHHHhhccCCCCCC-----Cc-ccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHH----HHHHHHHHhc-
Q 018207 127 DPEISALIAAKLKEFHDLDMPGQ-----KI-VRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEE----ISTLEKALYR- 195 (359)
Q Consensus 127 ~~~~~~~la~~La~lH~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~l~~~l~~- 195 (359)
.++.+..+|+.+|++|+-..... .. ..+...+..-+.+++...... .....++.++.. ++.....+..
T Consensus 125 t~~~l~~lak~vA~fH~~a~~n~~i~~~G~~~~~~~~~~eN~~q~~~~l~~~-~s~~~~d~i~~~t~~f~e~~~~lf~~R 203 (337)
T COG2187 125 TESLLDALAKVVARFHQRAPRNPCIDSFGEVGAVAYRVRENFAQTRKYLGIV-QSKQQIDRIEHMTEEFLERHGPLFDRR 203 (337)
T ss_pred CHHHHHHHHHHHHHHhhcCCCCccccccCCHHHHHhHHHhhHHHHhhhcCcc-cCHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 35678999999999998543211 11 122333333333443322111 000011222222 2222222211
Q ss_pred -CCCceeEEeccCCCCCeeEeCCCCceEEEE---Ee-eccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHH
Q 018207 196 -NDQHIGFCHNDLQYGNIMIDEVTKSITLID---YE-YASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHR 270 (359)
Q Consensus 196 -~~~~~vl~HgDl~~~Nil~~~~~~~v~lID---wE-~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (359)
......=||||+|.+||.+-+ +++.|+| |. --++.|..+|+|.+.. |++...-.+....
T Consensus 204 ~~~g~IRecHGDLhl~ni~l~d--g~~~LFDCIEFNd~fr~iDv~~D~AFl~M--------------DLe~~gr~dla~~ 267 (337)
T COG2187 204 IAEGFIRECHGDLHLRNICLWD--GEPALFDCIEFNDPFRFIDVLYDLAFLAM--------------DLEFRGRKDLARR 267 (337)
T ss_pred HhcCCceecccchhhcceeeec--CcceEEEEeecCCcchHHHHHHHHHHHHh--------------hHhhcCChHHHHH
Confidence 356678999999999999976 5788777 33 3457788899987753 3333332577889
Q ss_pred HHHHHhhcCCC
Q 018207 271 FLHAYLSSTGD 281 (359)
Q Consensus 271 fl~~Y~~~~~~ 281 (359)
|++.|+..+|.
T Consensus 268 ~ln~Yl~~tgD 278 (337)
T COG2187 268 FLNTYLEETGD 278 (337)
T ss_pred HHHHHHHHhCC
Confidence 99999998774
No 73
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.31 E-value=3.2e-06 Score=83.67 Aligned_cols=163 Identities=14% Similarity=0.166 Sum_probs=96.0
Q ss_pred HHHHHHHHHhcc-CCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc---------------
Q 018207 17 VEAKELLKSLAS-EWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF--------------- 80 (359)
Q Consensus 17 ~~~~~~l~~~~~-~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~--------------- 80 (359)
+.+++++.+-++ .|..+ -..++.++++.|....||+....+ .|+.++||+-+++....
T Consensus 101 ~~~~~~ie~elG~~~~~~--F~~fd~~PlasaSiaQVh~A~l~~----~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l 174 (537)
T PRK04750 101 ALARAIIEKALGGPVEEW--FDDFDIKPLASASIAQVHFARLKD----NGREVVVKVLRPDILPVIDADLALMYRLARWV 174 (537)
T ss_pred HHHHHHHHHHhCCCHHHH--HHhcChhhhcCCCccEEEEEEECC----CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHH
Confidence 555666654432 13211 123455899999999999998752 27899999987652100
Q ss_pred --------------------------cchHHHHHHHHHHhcC-----CC-CceeEEEe--CCceEEEeecCCCCCCCCCC
Q 018207 81 --------------------------FDRNDEIRTFEFMSKH-----GQ-GPRLLGRF--HNGRVEEFINARTLSASDIR 126 (359)
Q Consensus 81 --------------------------~dr~~E~~~l~~l~~~-----gl-~P~~~~~~--~~g~v~e~i~G~~l~~~~l~ 126 (359)
+|-..|..++..+.+. .+ .|++|... +..++|||++|.+++..
T Consensus 175 ~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~--- 251 (537)
T PRK04750 175 ERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV--- 251 (537)
T ss_pred HHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH---
Confidence 2334566666666542 22 68888643 34599999999886421
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEecc
Q 018207 127 DPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHND 206 (359)
Q Consensus 127 ~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgD 206 (359)
..++.. +. + ...+. . ..+...+.+ .+ ..++.|+|
T Consensus 252 ------------~~l~~~---g~---d-~~~la---~----------------~~v~~~~~Q---if-----~~GffHaD 285 (537)
T PRK04750 252 ------------AALRAA---GT---D-MKLLA---E----------------RGVEVFFTQ---VF-----RDGFFHAD 285 (537)
T ss_pred ------------HHHHhc---CC---C-HHHHH---H----------------HHHHHHHHH---HH-----hCCeeeCC
Confidence 011110 00 0 00010 0 001111111 12 24799999
Q ss_pred CCCCCeeEeCCCC----ceEEEEEeeccCCchH
Q 018207 207 LQYGNIMIDEVTK----SITLIDYEYASYNPVA 235 (359)
Q Consensus 207 l~~~Nil~~~~~~----~v~lIDwE~a~~~~~~ 235 (359)
+|||||+++++ + .+.+|||..++.-++.
T Consensus 286 pHPGNIlv~~~-g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 286 MHPGNIFVSYD-PPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred CChHHeEEecC-CCCCCeEEEEecceEEECCHH
Confidence 99999999986 4 7999999999876553
No 74
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.30 E-value=5.6e-06 Score=69.07 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=59.1
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCCceEEEeecCCCCC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINARTLS 121 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~~l~ 121 (359)
+.+..|.+..+|.+... +..+++|+-..++. --+.+.|+++++.++..|++|++|.+..+...||||+|+++.
T Consensus 28 ~~L~KG~~s~Vyl~~~~------~~~~a~Kvrr~ds~-r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~ 100 (201)
T COG2112 28 KELAKGTTSVVYLGEWR------GGEVALKVRRRDSP-RRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLG 100 (201)
T ss_pred hhhhcccccEEEEeecc------CceEEEEEecCCcc-hhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchh
Confidence 45677999999999864 56788888665432 123468999999999999999999999988779999999875
No 75
>PRK14705 glycogen branching enzyme; Provisional
Probab=98.27 E-value=2.2e-05 Score=83.87 Aligned_cols=226 Identities=14% Similarity=0.092 Sum_probs=124.7
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC--CceeEEEe----------C
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ--GPRLLGRF----------H 107 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl--~P~~~~~~----------~ 107 (359)
.++.+++-.||+...+.. .+.++|+|+++.-.. .++ =|.++.+.|.+.|. +|++++.. .
T Consensus 148 ~~r~l~~EQSNTSvi~gd------~~~~~ilKlfRrl~~-G~N--PdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~ 218 (1224)
T PRK14705 148 SVKVLSGEQSNTSVIVDD------GDSAAIVKFFRVLSA-GKN--PEVELGAALTAAGTSEVPATLGWVTGEWDGPASNA 218 (1224)
T ss_pred CccccccccCceEEEECC------CCccEEEEEeeecCC-CCC--ccHHHHHHHhhCCCccCCCccEEEEEeeccccccc
Confidence 456677778999888831 123999999975432 233 36778888888776 68776652 1
Q ss_pred C----------ceEEEeecCCC--C--CCCCCC----ChHHHHHHHHHHHhhccCCCCCCCcc----cchHHHHHHHHHh
Q 018207 108 N----------GRVEEFINART--L--SASDIR----DPEISALIAAKLKEFHDLDMPGQKIV----RLWDRSRNWLIAT 165 (359)
Q Consensus 108 ~----------g~v~e~i~G~~--l--~~~~l~----~~~~~~~la~~La~lH~~~~~~~~~~----~~~~~~~~~~~~~ 165 (359)
+ +++.+||++.. . +.+.+. -...++.+|+..|+||..-......+ ......+.|.+.+
T Consensus 219 ~~~~~~~~~tLa~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~~~~~~f~~~~~~~~~~~~~rL 298 (1224)
T PRK14705 219 GATARAVTGELAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAETLGTHDGQEQGPDIAAGVARRV 298 (1224)
T ss_pred CCccccCceeHHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCHHHHHHHHHHHH
Confidence 1 25678887531 1 100110 12457889999999997422111111 1112244555554
Q ss_pred hcCCC--hhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCC----CceEEEEEee---------cc
Q 018207 166 KNLSP--PEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVT----KSITLIDYEY---------AS 230 (359)
Q Consensus 166 ~~~~~--~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~----~~v~lIDwE~---------a~ 230 (359)
..... +... ....+.+.+.+..|.. ....+..=||||+|.|.||+.++. ....|||||- -.
T Consensus 299 ~~~~~~~~~~~-~~~~~~l~~~~~~l~~---~~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~ERR~ 374 (1224)
T PRK14705 299 RGSWAEAGPAV-GPYDHALDELLSALDG---RNAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPIDERNS 374 (1224)
T ss_pred HHHHhhCCHHH-HHHHHHHHHHHHHHhc---cCccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChhhhcc
Confidence 33211 0011 0011223333333322 122567889999999999998531 3589999985 23
Q ss_pred CCchHHhHHHHHHHHhhccCCC--CCCCCCC-CCCCCHHHHHHHHHHHhhcC
Q 018207 231 YNPVAYDIANHFCEMAADYHTE--TPHLMDY-SKYPDLEERHRFLHAYLSST 279 (359)
Q Consensus 231 ~~~~~~Dla~~~~e~~~~~~~~--~~~~~~~-~~~~~~~~~~~fl~~Y~~~~ 279 (359)
...|.-|+|-++.++..-.... ....... ..+- ...+.+||++|.+..
T Consensus 375 k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~~W~-~~~~~aFL~gY~~~~ 425 (1224)
T PRK14705 375 PDVPLRDVTGMLRSFDYAAGAATRENEGAHVPESWV-DDCAAAFLAGYSEVT 425 (1224)
T ss_pred CCChHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH-HHHHHHHHHHHHHhc
Confidence 4678899999887653310000 0000000 0000 234678999999864
No 76
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.21 E-value=9.4e-06 Score=76.80 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=79.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-c-cchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-F-FDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~-~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
++.|+.|....+|++.... .++.+++|+....... . ....+|..+++.+...++. +++..+. + .+|+||
T Consensus 79 ~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRP----TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVV-KCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred hhhccCCCCeEEEEEEECC----CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcc-eeeeEeccCCeEEEEEec
Confidence 4567888889999997542 3688999987543211 1 1224677887777644443 3444433 2 379999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+...... . ...+..+.. .+...+..|.
T Consensus 154 ~~~~~L~~~~~~-------------------------~--~~~~~~i~~-----------------qi~~aL~~LH---- 185 (353)
T PLN00034 154 MDGGSLEGTHIA-------------------------D--EQFLADVAR-----------------QILSGIAYLH---- 185 (353)
T ss_pred CCCCcccccccC-------------------------C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 998655311000 0 001111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|+++.|||++++ +.+.|+||..+..
T Consensus 186 ----~~~ivHrDlkp~NIll~~~-~~~kL~DfG~~~~ 217 (353)
T PLN00034 186 ----RRHIVHRDIKPSNLLINSA-KNVKIADFGVSRI 217 (353)
T ss_pred ----HCCEeecCCCHHHEEEcCC-CCEEEccccccee
Confidence 2368999999999999986 7899999987754
No 77
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.20 E-value=2.7e-06 Score=83.63 Aligned_cols=162 Identities=19% Similarity=0.261 Sum_probs=98.5
Q ss_pred HHHHHHHHHhcc-CCCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc---------------
Q 018207 17 VEAKELLKSLAS-EWEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF--------------- 80 (359)
Q Consensus 17 ~~~~~~l~~~~~-~w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~--------------- 80 (359)
..+++++.+-++ .|..+ -..++-+|++.+.-..||+.+..+ |+.++||+-+++....
T Consensus 107 ~~~~~iie~eLG~~iee~--F~eF~~~PiAsASIaQVH~A~L~s-----G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~ 179 (517)
T COG0661 107 EEAERIIEEELGRPIEEL--FSEFEPEPIASASIAQVHRAVLKS-----GEEVAVKVQRPGIRERIEADLKLLRRLARLI 179 (517)
T ss_pred HHHHHHHHHHhCCCHHHH--HHHcCCCchhhhhHhhheeEEecC-----CCEEEEEecCCChHHHHHHHHHHHHHHHHHH
Confidence 566666665554 24321 123455789999999999999863 7999999988753111
Q ss_pred --------------------------cchHHHHHHHHHHhcC-----CC-CceeEEEe--CCceEEEeecCCCCCCCCCC
Q 018207 81 --------------------------FDRNDEIRTFEFMSKH-----GQ-GPRLLGRF--HNGRVEEFINARTLSASDIR 126 (359)
Q Consensus 81 --------------------------~dr~~E~~~l~~l~~~-----gl-~P~~~~~~--~~g~v~e~i~G~~l~~~~l~ 126 (359)
+|-..|+..++.+.++ .+ +|+++... +.-++||||+|.+++..+
T Consensus 180 ~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~-- 257 (517)
T COG0661 180 KRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA-- 257 (517)
T ss_pred HHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH--
Confidence 1123456666665542 12 68888654 445899999998876321
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEecc
Q 018207 127 DPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHND 206 (359)
Q Consensus 127 ~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgD 206 (359)
.+.+ +.. + .+.+..-. ....+ +..+ .-++.|+|
T Consensus 258 ----------~l~~-~g~--------d-~k~ia~~~-------------------~~~f~---~q~~-----~dgffHaD 290 (517)
T COG0661 258 ----------ALKS-AGI--------D-RKELAELL-------------------VRAFL---RQLL-----RDGFFHAD 290 (517)
T ss_pred ----------HHHh-cCC--------C-HHHHHHHH-------------------HHHHH---HHHH-----hcCccccC
Confidence 0111 110 1 00110000 00111 1112 23899999
Q ss_pred CCCCCeeEeCCCCceEEEEEeeccCCchH
Q 018207 207 LQYGNIMIDEVTKSITLIDYEYASYNPVA 235 (359)
Q Consensus 207 l~~~Nil~~~~~~~v~lIDwE~a~~~~~~ 235 (359)
+|||||+++.+ +.+.++||...+.=++-
T Consensus 291 pHpGNi~v~~~-g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 291 PHPGNILVRSD-GRIVLLDFGIVGRLDPK 318 (517)
T ss_pred CCccceEEecC-CcEEEEcCcceecCCHH
Confidence 99999999997 89999999988876664
No 78
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=98.13 E-value=8.9e-06 Score=69.14 Aligned_cols=137 Identities=20% Similarity=0.253 Sum_probs=83.9
Q ss_pred CCC-CceeEEEeCCceEEEeecCCCCCCC---CCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCCh
Q 018207 96 HGQ-GPRLLGRFHNGRVEEFINARTLSAS---DIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPP 171 (359)
Q Consensus 96 ~gl-~P~~~~~~~~g~v~e~i~G~~l~~~---~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
.|. +.+++..+.+.+++|+..|...... .=.+.+..+-+++.++++|+-. ++++ |.+ .-+..|++.+-..-..
T Consensus 63 ~G~Gaarvla~d~~alLlEra~~~rsl~~l~~~G~Dd~aTrIac~a~~rlh~Pr-p~pp-p~L-~pL~~wf~sLf~~a~~ 139 (274)
T COG3570 63 DGIGAARVLAQDDNALLLERAGGERSLDVLVRDGNDDAATRIACEALARLHAPR-PSPP-PEL-LPLERWFESLFRKARQ 139 (274)
T ss_pred hcCCcchhhccCccHHHHHhccccchHHHHHHhCCchHHHHHHHHHHHHhhCCC-CCCC-ccc-ccHHHHHHHHHHHHhh
Confidence 355 4678888778899999988643211 1123355677889999999953 2221 222 2355666543211000
Q ss_pred hhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHH
Q 018207 172 EEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCE 244 (359)
Q Consensus 172 ~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e 244 (359)
+ .+ -+.+....-+..+ ..+...++.|||+|.+|||-.+. ..-.+||-- .-+|+++||.|++||.
T Consensus 140 d----~~--i~v~aA~~A~~LL-~~p~di~pLHGDlHH~Nild~~~-rGWlvIDPk-gl~Gdrg~D~ANlf~N 203 (274)
T COG3570 140 D----GS--IYVEAARAAQTLL-DTPRDIRPLHGDLHHGNILDGDR-RGWLVIDPK-GLIGDRGFDYANLFCN 203 (274)
T ss_pred c----CC--cchhHHHHHHHHh-cCccccccCcccccccccccCCc-CceEEEccc-cccCccccchHhhhcC
Confidence 0 00 0111111222333 45777899999999999996553 356799964 5689999999999873
No 79
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.12 E-value=2.6e-05 Score=66.63 Aligned_cols=140 Identities=20% Similarity=0.193 Sum_probs=81.9
Q ss_pred ecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC----CceEEEeecC
Q 018207 44 VKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH----NGRVEEFINA 117 (359)
Q Consensus 44 l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~----~g~v~e~i~G 117 (359)
|+.|..+.+|++.... .+..+++|++...... .....+|.+.++.+...++ ++++.... ..++++|++|
T Consensus 1 l~~g~~~~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKK----TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI-VKLYGVFEDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecC----CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCe-eeEeeeeecCCeEEEEEecCCC
Confidence 4568889999998642 3689999998765321 1123468888887766333 34444332 2489999998
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++. ..+...+ . +........+.. .+.+.+..+.
T Consensus 76 ~~l~--------------~~~~~~~---~-----~~~~~~~~~~~~-----------------~l~~~l~~lh------- 109 (215)
T cd00180 76 GSLK--------------DLLKENE---G-----KLSEDEILRILL-----------------QILEGLEYLH------- 109 (215)
T ss_pred CcHH--------------HHHHhcc---C-----CCCHHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 5442 1111111 0 000111111111 1111222221
Q ss_pred CceeEEeccCCCCCeeEeC-CCCceEEEEEeeccCCchHH
Q 018207 198 QHIGFCHNDLQYGNIMIDE-VTKSITLIDYEYASYNPVAY 236 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~-~~~~v~lIDwE~a~~~~~~~ 236 (359)
...++|+|++|+||++++ + +.+.|+||+.+.......
T Consensus 110 -~~~~~H~dl~~~ni~~~~~~-~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 110 -SNGIIHRDLKPENILLDSDN-GKVKLADFGLSKLLTSDK 147 (215)
T ss_pred -hCCeeccCCCHhhEEEeCCC-CcEEEecCCceEEccCCc
Confidence 127999999999999998 5 689999999887655443
No 80
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.05 E-value=4.7e-05 Score=73.08 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=86.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCCc----eE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHNG----RV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g----~v 111 (359)
-++.|+.|.-..||+++-.+ .|.-|-+|+-.+.. ........|..+|.. .+.....++|+.+++. +|
T Consensus 145 ~Lk~IgkGAfGeVrLarKk~----Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 145 LLKVIGKGAFGEVRLARKKD----TGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred hheeeccccceeEEEEEEcc----CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCeeEEE
Confidence 46788889999999998653 36778888876532 111223457777665 5566678999999763 89
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||+||-.+- ..|.+.--+ + -+..+.|+.. .--.++.+
T Consensus 220 MEylPGGD~m--------------TLL~~~~~L-------~--e~~arfYiaE-----------------~vlAI~~i-- 257 (550)
T KOG0605|consen 220 MEYLPGGDMM--------------TLLMRKDTL-------T--EDWARFYIAE-----------------TVLAIESI-- 257 (550)
T ss_pred EEecCCccHH--------------HHHHhcCcC-------c--hHHHHHHHHH-----------------HHHHHHHH--
Confidence 9999995321 111110000 0 0112222211 11112222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
+..+++|+|++|.|+|++.. |-+.|-||..|.-
T Consensus 258 ------H~~gyIHRDIKPdNlLiD~~-GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 258 ------HQLGYIHRDIKPDNLLIDAK-GHIKLSDFGLSTG 290 (550)
T ss_pred ------HHcCcccccCChhheeecCC-CCEeeccccccch
Confidence 23489999999999999996 7899999999843
No 81
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.05 E-value=2.9e-05 Score=72.47 Aligned_cols=137 Identities=15% Similarity=0.155 Sum_probs=78.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
++.|+.|....+|++.... .+..+++|+..... ........|..++..+......++++..+. + .+||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKG----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred EEEEeeccCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4667778889999997542 35789999875421 111112346666666655444555655443 2 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..|. ..+.+-. .. + ......+.. ++...+..|.
T Consensus 81 E~~~~g~L~--------------~~~~~~~--~~-----~--~~~~~~~~~-----------------qi~~al~~lH-- 118 (324)
T cd05587 81 EYVNGGDLM--------------YHIQQVG--KF-----K--EPHAVFYAA-----------------EIAIGLFFLH-- 118 (324)
T ss_pred cCCCCCcHH--------------HHHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999886542 1111000 00 0 011111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 119 ------~~~ivH~dlkp~Nill~~~-~~~kL~Dfg~~~ 149 (324)
T cd05587 119 ------SKGIIYRDLKLDNVMLDAE-GHIKIADFGMCK 149 (324)
T ss_pred ------HCCeEecCCCHHHeEEcCC-CCEEEeecCcce
Confidence 2369999999999999986 789999998764
No 82
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.03 E-value=9.1e-06 Score=72.78 Aligned_cols=137 Identities=20% Similarity=0.218 Sum_probs=82.0
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccch---HHHHHHHHHHhcCCCCceeEEEe--CC--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDR---NDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr---~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e 113 (359)
.+.|+.|....+|++.... .+..+++|+..........+ ..|..+++.+....+ ++++... .+ ..+++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKK----NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI-VQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEESSEEEEEEEETT----TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB-CHEEEEEEESSEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECC----CCeEEEEEEeccccccccccchhhhhhhcccccccccc-cccccccccccccccccc
Confidence 4678888899999998753 36789999987653221111 237888888854444 4444443 22 27999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
+++|.++. . .+. . .. +.....+..+.. .+.+.+..|.+
T Consensus 79 ~~~~~~L~-----------~---~l~---~----~~--~~~~~~~~~~~~-----------------qi~~~L~~Lh~-- 116 (260)
T PF00069_consen 79 YCPGGSLQ-----------D---YLQ---K----NK--PLSEEEILKIAY-----------------QILEALAYLHS-- 116 (260)
T ss_dssp EETTEBHH-----------H---HHH---H----HS--SBBHHHHHHHHH-----------------HHHHHHHHHHH--
T ss_pred cccccccc-----------c---ccc---c----cc--cccccccccccc-----------------ccccccccccc--
Confidence 99986432 1 111 0 00 000111111111 11222223322
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|++|.||+++++ +.+.|+||+.+..
T Consensus 117 ------~~i~H~dikp~NIl~~~~-~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 117 ------KGIVHRDIKPENILLDEN-GEVKLIDFGSSVK 147 (260)
T ss_dssp ------TTEEESSBSGGGEEESTT-SEEEESSGTTTEE
T ss_pred ------cccccccccccccccccc-ccccccccccccc
Confidence 288999999999999975 7899999998764
No 83
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.02 E-value=2.4e-05 Score=73.31 Aligned_cols=137 Identities=20% Similarity=0.246 Sum_probs=79.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
++.|+.|....+|++.... .+..+++|+..... ........|..++..+.... .++++..+.+ .+|+
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~-iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKD----TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW-LVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred EEEEeecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCC-CccEEEEEEcCCEEEEEE
Confidence 5677788889999998642 36789999875431 11111235677776665333 3445544432 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|.+|.. . +. ... +........+..+ +...+..|.
T Consensus 81 e~~~g~~L~~-------~-------l~---~~~------~l~~~~~~~~~~q-----------------i~~~l~~lH-- 118 (333)
T cd05600 81 EYVPGGDFRT-------L-------LN---NLG------VLSEDHARFYMAE-----------------MFEAVDALH-- 118 (333)
T ss_pred eCCCCCCHHH-------H-------HH---HcC------CCCHHHHHHHHHH-----------------HHHHHHHHH--
Confidence 9999866531 1 11 100 0001112222211 112222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 119 ------~~~ivH~dlkp~Nil~~~~-~~~kL~Dfg~a~~ 150 (333)
T cd05600 119 ------ELGYIHRDLKPENFLIDAS-GHIKLTDFGLSKG 150 (333)
T ss_pred ------HCCccccCCCHHHEEECCC-CCEEEEeCcCCcc
Confidence 2268999999999999886 7899999987753
No 84
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.99 E-value=2.6e-05 Score=74.47 Aligned_cols=137 Identities=17% Similarity=0.218 Sum_probs=79.8
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v 111 (359)
-++.|+.|....+|++.... .++.+.+|+..... ........|..+++.+....+. +++..+. + .+|
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv-~~~~~~~~~~~~~lv 79 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVD----TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVV-KLYYSFQDKDNLYFV 79 (376)
T ss_pred EEEEEEeCCCeEEEEEEECC----CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcc-eEEEEEEcCCEEEEE
Confidence 45778888899999997643 36889999875321 0111123577777777554443 4444432 2 279
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|..|. . .+.+ ... .+ ...+..|..+ +...+..|.
T Consensus 80 ~E~~~~g~L~----------~----~i~~---~~~----~~--~~~~~~~~~q-----------------i~~al~~lH- 118 (376)
T cd05598 80 MDYIPGGDMM----------S----LLIR---LGI----FE--EDLARFYIAE-----------------LTCAIESVH- 118 (376)
T ss_pred EeCCCCCcHH----------H----HHHh---cCC----CC--HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 9999886542 1 1111 000 00 0111222211 112222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 119 -------~~~ivHrDlkp~Nill~~~-~~ikL~DFG~a~ 149 (376)
T cd05598 119 -------KMGFIHRDIKPDNILIDRD-GHIKLTDFGLCT 149 (376)
T ss_pred -------HCCeEeCCCCHHHEEECCC-CCEEEEeCCCCc
Confidence 2368999999999999986 789999999864
No 85
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.96 E-value=5.7e-05 Score=67.91 Aligned_cols=138 Identities=16% Similarity=0.174 Sum_probs=77.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEeec
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEFIN 116 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~i~ 116 (359)
.+.++.|....+|++... .+..+++|..........+-..|..+++.+....+. +++..+. + .+++||++
T Consensus 11 ~~~lg~g~~~~v~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWN-----NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLI-QLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred EEEecccCCccEEEEEec-----CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCcc-ceeEEEecCCCeeeeeeccc
Confidence 366777778899998643 246788998764322111223577777777644443 3444332 2 37899998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. .+.. .. ... .. ...+..+.. .+...+..+.
T Consensus 85 ~~~L~~--------------~~~~---~~--~~~-~~-~~~~~~~~~-----------------~i~~~l~~lH------ 120 (261)
T cd05068 85 YGSLLE--------------YLQG---GA--GRA-LK-LPQLIDMAA-----------------QVASGMAYLE------ 120 (261)
T ss_pred CCcHHH--------------HHhc---cC--CCC-CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 765431 1110 00 000 00 111111111 1112222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.|+||+.+..
T Consensus 121 --~~~i~H~dl~p~Nil~~~~-~~~~l~dfg~~~~ 152 (261)
T cd05068 121 --AQNYIHRDLAARNVLVGEN-NICKVADFGLARV 152 (261)
T ss_pred --hCCeeeccCCcceEEEcCC-CCEEECCcceEEE
Confidence 2369999999999999986 7899999997764
No 86
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.96 E-value=7.2e-05 Score=69.42 Aligned_cols=164 Identities=16% Similarity=0.242 Sum_probs=98.2
Q ss_pred ChHHHHHHHHHhccC--CCCCCCCCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccc----------
Q 018207 15 IPVEAKELLKSLASE--WEDVVDRNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFD---------- 82 (359)
Q Consensus 15 ~~~~~~~~l~~~~~~--w~~~~~~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~d---------- 82 (359)
+....+.+|.+++.. +..++ =.|+.|-.-.+|.++.. +|..+.+|||....-.+-|
T Consensus 128 LDPRTrmvLfrll~RG~i~~in-------GCiSTGKEANVYHat~~-----dG~~~AIKIYKTSILvFKDRdRYV~GEfR 195 (520)
T KOG2270|consen 128 LDPRTRMVLFRLLNRGVIVEIN-------GCISTGKEANVYHATEE-----DGSEFAIKIYKTSILVFKDRDRYVSGEFR 195 (520)
T ss_pred cChHHHHHHHHHHhcCeeeecc-------cccccCccceeEeeecC-----CCceEEEEEEeeeEEEEechhhhccceee
Confidence 445556666666532 22110 12456777789998643 3677899998643111101
Q ss_pred -----------------hHHHHHHHHHHhcCCC-CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccC
Q 018207 83 -----------------RNDEIRTFEFMSKHGQ-GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDL 144 (359)
Q Consensus 83 -----------------r~~E~~~l~~l~~~gl-~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~ 144 (359)
.+.|.+.|..|...|+ +|+++..-.+-+||+||.+.-.....+.+..
T Consensus 196 FRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~--------------- 260 (520)
T KOG2270|consen 196 FRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPCPEPILLKNHVLVMEFLGRDGWAAPKLKDAS--------------- 260 (520)
T ss_pred eecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCceeeecceEeeeeccCCCCcCccccccc---------------
Confidence 2578999999999998 7999999999999999975443322232211
Q ss_pred CCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEE
Q 018207 145 DMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLI 224 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lI 224 (359)
.. + ..+..+.. .+-..+..|.+ ...++|.||.--|+|+.+ +.+++|
T Consensus 261 -ls----~---~ka~~~Y~-----------------~~v~~MR~lY~-------~c~LVHADLSEfN~Lyhd--G~lyiI 306 (520)
T KOG2270|consen 261 -LS----T---SKARELYQ-----------------QCVRIMRRLYQ-------KCRLVHADLSEFNLLYHD--GKLYII 306 (520)
T ss_pred -CC----h---HHHHHHHH-----------------HHHHHHHHHHH-------HhceeccchhhhhheEEC--CEEEEE
Confidence 00 0 11111111 11122223322 347999999999999997 689999
Q ss_pred EEeeccC--CchHHhHH
Q 018207 225 DYEYASY--NPVAYDIA 239 (359)
Q Consensus 225 DwE~a~~--~~~~~Dla 239 (359)
|=--+-- -|-++|+-
T Consensus 307 DVSQSVE~DHP~aldFL 323 (520)
T KOG2270|consen 307 DVSQSVEHDHPHALDFL 323 (520)
T ss_pred EccccccCCChhHHHHH
Confidence 9765542 23355554
No 87
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.94 E-value=3.4e-05 Score=73.22 Aligned_cols=137 Identities=14% Similarity=0.204 Sum_probs=78.1
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
.++.|+.|....+|++.... .+..+.+|+..... ........|..++..+.... .++++..+.+ .+|
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKD----TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVKMFYSFQDKRNLYLI 79 (360)
T ss_pred EEEEEeeCCCEEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC-EeeEEEEEEcCCEEEEE
Confidence 45678888889999997653 36788899875321 11111134666666554322 3445544432 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|..|. .. +.+-. .. + ......|..+ +...+..|.
T Consensus 80 ~E~~~gg~L~----------~~----l~~~~--~l-----~--~~~~~~~~~q-----------------i~~~L~~lH- 118 (360)
T cd05627 80 MEFLPGGDMM----------TL----LMKKD--TL-----S--EEATQFYIAE-----------------TVLAIDAIH- 118 (360)
T ss_pred EeCCCCccHH----------HH----HHhcC--CC-----C--HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 9999986542 11 11100 00 0 1112222211 111222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||+.+.
T Consensus 119 -------~~givHrDLkp~NIli~~~-~~vkL~DfG~~~ 149 (360)
T cd05627 119 -------QLGFIHRDIKPDNLLLDAK-GHVKLSDFGLCT 149 (360)
T ss_pred -------HCCeEccCCCHHHEEECCC-CCEEEeeccCCc
Confidence 2378999999999999886 789999999875
No 88
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.93 E-value=8.8e-05 Score=67.59 Aligned_cols=142 Identities=15% Similarity=0.186 Sum_probs=82.0
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe-----CC----ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF-----HN----GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-----~~----g~v 111 (359)
.+.|+.|..+.+|++.... .+..+++|+.............|..+++.+.++.-.++++... ++ .++
T Consensus 23 ~~~lg~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv 98 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKK----NGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLV 98 (286)
T ss_pred eeeeccCCCcEEEEEEECC----CCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEE
Confidence 3567778888999987643 3678999987542211112246888888887665556665542 11 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|.+|.. . +...+... .. .. ...+..+.. .+.+.+..|.
T Consensus 99 ~e~~~~~~L~~-------~-------l~~~~~~~---~~-~~-~~~~~~~~~-----------------~i~~~l~~lH- 141 (286)
T cd06638 99 LELCNGGSVTD-------L-------VKGFLKRG---ER-ME-EPIIAYILH-----------------EALMGLQHLH- 141 (286)
T ss_pred EeecCCCCHHH-------H-------HHHhhccC---cc-cc-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999876531 1 11111100 00 00 111111111 1112222221
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 142 -------~~~i~H~dlkp~nili~~~-~~~kl~dfg~~~~ 173 (286)
T cd06638 142 -------VNKTIHRDVKGNNILLTTE-GGVKLVDFGVSAQ 173 (286)
T ss_pred -------hCCccccCCCHHhEEECCC-CCEEEccCCceee
Confidence 2268999999999999986 6799999998754
No 89
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.91 E-value=0.00018 Score=64.62 Aligned_cols=137 Identities=18% Similarity=0.236 Sum_probs=77.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC-C--ceEEEeecCC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N--GRVEEFINAR 118 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~--g~v~e~i~G~ 118 (359)
..|+.|....+|++.... +..+++|...........-.+|..+++.+...++.|- +.... + .++|||++|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~-----~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~-~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNG-----TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPL-YAVVSEEPIYIVTEFMGKG 85 (260)
T ss_pred eeecCcCCCeEEEEEEcC-----CceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeE-EEEEcCCCcEEEEEcCCCC
Confidence 456677778999987542 4568888765432211112468888887776665553 33332 2 3899999876
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCC
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQ 198 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 198 (359)
++.. .+. .... .. .. ......+.. .+...+..+.
T Consensus 86 ~L~~--------------~~~---~~~~-~~--~~-~~~~~~~~~-----------------~l~~al~~lH-------- 119 (260)
T cd05069 86 SLLD--------------FLK---EGDG-KY--LK-LPQLVDMAA-----------------QIADGMAYIE-------- 119 (260)
T ss_pred CHHH--------------HHh---hCCC-CC--CC-HHHHHHHHH-----------------HHHHHHHHHH--------
Confidence 5421 111 1100 00 01 111111111 1222222222
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.|+||+.+..
T Consensus 120 ~~~i~H~dl~~~Nill~~~-~~~~l~dfg~~~~ 151 (260)
T cd05069 120 RMNYIHRDLRAANILVGDN-LVCKIADFGLARL 151 (260)
T ss_pred hCCEeecccCcceEEEcCC-CeEEECCCccceE
Confidence 2258999999999999986 7789999998764
No 90
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.90 E-value=2.4e-05 Score=74.19 Aligned_cols=136 Identities=15% Similarity=0.202 Sum_probs=78.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
++.|+.|....+|++.... .+..+++|+..... ........|..+++.+... ..++++..+.+ .+|+
T Consensus 6 ~~~lG~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~-~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKD----TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNP-WVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred EEEEEecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CCcceEEEEEcCCeEEEEE
Confidence 5677888889999998642 36789999875321 1111123577777776532 33455554432 3799
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..|. . .+ +.... .. ......+.. ++...+..|.
T Consensus 81 E~~~~g~L~----------~----~l---~~~~~-----l~-~~~~~~~~~-----------------qi~~aL~~lH-- 118 (364)
T cd05599 81 EYLPGGDMM----------T----LL---MKKDT-----FT-EEETRFYIA-----------------ETILAIDSIH-- 118 (364)
T ss_pred CCCCCcHHH----------H----HH---HHcCC-----CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999875432 1 11 11000 00 111222221 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 119 ------~~~ivH~Dlkp~NIl~~~~-~~~kl~Dfg~~~ 149 (364)
T cd05599 119 ------KLGYIHRDIKPDNLLLDAK-GHIKLSDFGLCT 149 (364)
T ss_pred ------HCCeEeccCCHHHeEECCC-CCEEEeecccce
Confidence 2368999999999999986 789999999775
No 91
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.90 E-value=9.4e-05 Score=66.68 Aligned_cols=142 Identities=14% Similarity=0.168 Sum_probs=81.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--------ce
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--------GR 110 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--------g~ 110 (359)
.+.++.|....+|++.... .+..+++|+.............|..+++.+..+.-.++++..+. . .+
T Consensus 11 ~~~l~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~l 86 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKK----TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWL 86 (275)
T ss_pred eeeecCCCCeEEEEEEECC----CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEE
Confidence 4567777778899997642 35789999876543221122467788887766655666665541 1 37
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
++||++|.++.. .+......... .. ...+..+. ..+.+.+..+
T Consensus 87 v~e~~~~~~L~~--------------~~~~~~~~~~~----~~-~~~~~~~~-----------------~ql~~al~~l- 129 (275)
T cd06608 87 VMELCGGGSVTD--------------LVKGLRKKGKR----LK-EEWIAYIL-----------------RETLRGLAYL- 129 (275)
T ss_pred EEEcCCCCcHHH--------------HHHHHhhcCCC----CC-HHHHHHHH-----------------HHHHHHHHHH-
Confidence 899998865421 11111100000 00 01111111 1111222222
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
....++|+|++|.||+++++ +.+.|+||..+..
T Consensus 130 -------H~~~i~H~~l~p~ni~~~~~-~~~~l~d~~~~~~ 162 (275)
T cd06608 130 -------HENKVIHRDIKGQNILLTKN-AEVKLVDFGVSAQ 162 (275)
T ss_pred -------hcCCcccCCCCHHHEEEccC-CeEEECCCcccee
Confidence 12368999999999999986 7899999987754
No 92
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.90 E-value=5.2e-05 Score=70.83 Aligned_cols=134 Identities=16% Similarity=0.144 Sum_probs=74.8
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc----cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE----VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
.|+.|....+|++.... .+..+++|+...... .......|..+++.+.... .++++..+. + .+||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~-i~~~~~~~~~~~~~~lv~E~ 76 (323)
T cd05595 2 LLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF-LTALKYAFQTHDRLCFVMEY 76 (323)
T ss_pred eeeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC-CcceeeEEecCCEEEEEEeC
Confidence 36667788999997542 368899998754311 1111134666666654333 334444432 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. ..+.+ ... .. ......+.. ++...+..|.
T Consensus 77 ~~~~~L~--------------~~l~~---~~~-----~~-~~~~~~~~~-----------------qi~~aL~~LH---- 112 (323)
T cd05595 77 ANGGELF--------------FHLSR---ERV-----FT-EERARFYGA-----------------EIVSALEYLH---- 112 (323)
T ss_pred CCCCcHH--------------HHHHH---cCC-----CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 01110 000 00 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 113 ----~~~ivH~Dlkp~NIll~~~-~~~kL~Dfg~~~ 143 (323)
T cd05595 113 ----SRDVVYRDIKLENLMLDKD-GHIKITDFGLCK 143 (323)
T ss_pred ----HCCeEecCCCHHHEEEcCC-CCEEecccHHhc
Confidence 2369999999999999986 789999998764
No 93
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.89 E-value=0.00011 Score=67.34 Aligned_cols=137 Identities=20% Similarity=0.176 Sum_probs=76.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i 115 (359)
++.++.|....+|++.... .+..+++|+....... ..+...|..+++.+.... .++++..+ ++ .+|+||+
T Consensus 17 ~~~lg~g~~g~vy~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKE----TGALAAAKVIETKSEEELEDYMVEIEILATCNHPY-IVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hheecCCCCeEEEEEEECC----CCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCc-EeeeEEEEEeCCeEEEEEecC
Confidence 3457778888999997642 3678889987644321 111234666666655333 34444433 22 3899999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|..+.. .+ ++... +-....+..+.. .+...+..+
T Consensus 92 ~~~~l~~-------~~----------~~~~~-----~l~~~~~~~~~~-----------------ql~~~l~~l------ 126 (292)
T cd06644 92 PGGAVDA-------IM----------LELDR-----GLTEPQIQVICR-----------------QMLEALQYL------ 126 (292)
T ss_pred CCCcHHH-------HH----------HhhcC-----CCCHHHHHHHHH-----------------HHHHHHHHH------
Confidence 9865421 10 00000 000111111111 111122222
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
....++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 127 --H~~~i~H~dlkp~Nili~~~-~~~kl~dfg~~~ 158 (292)
T cd06644 127 --HSMKIIHRDLKAGNVLLTLD-GDIKLADFGVSA 158 (292)
T ss_pred --hcCCeeecCCCcceEEEcCC-CCEEEccCccce
Confidence 12378999999999999875 789999998654
No 94
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.88 E-value=5.7e-05 Score=70.33 Aligned_cols=135 Identities=17% Similarity=0.154 Sum_probs=75.3
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc----cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE----VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+...... .......|..++..+..+...++++..... .+|+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~ 77 (316)
T cd05592 2 VLGKGSFGKVMLAELKG----TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEY 77 (316)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence 46678889999997642 357788998754211 001112344444444444445566655432 289999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.+|. ..+..-+. . + ...+..+.. ++...+..|.+
T Consensus 78 ~~gg~L~--------------~~~~~~~~--~-----~--~~~~~~~~~-----------------qi~~al~~LH~--- 114 (316)
T cd05592 78 LNGGDLM--------------FHIQSSGR--F-----D--EARARFYAA-----------------EIICGLQFLHK--- 114 (316)
T ss_pred CCCCcHH--------------HHHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHHH---
Confidence 9886542 11111010 0 0 011111111 12222222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 115 -----~~ivH~dlkp~Nill~~~-~~~kL~Dfg~a~ 144 (316)
T cd05592 115 -----KGIIYRDLKLDNVLLDKD-GHIKIADFGMCK 144 (316)
T ss_pred -----CCEEeCCCCHHHeEECCC-CCEEEccCcCCe
Confidence 368999999999999886 789999999775
No 95
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.88 E-value=0.00011 Score=70.14 Aligned_cols=136 Identities=18% Similarity=0.202 Sum_probs=78.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
++.|+.|....+|++.... .++.+.+|+..... ........|..+++.+... ..++++..+.+ .+|+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKD----TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSP-WVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred eEEEeecCCEEEEEEEECC----CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCC-CcceEEEEEEcCCeeEEEE
Confidence 4677888889999997542 36788899764321 1111123567776665433 34556655432 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..|. ..+.+.. .. + ...+..|..+ +...++.|.
T Consensus 81 E~~~gg~L~--------------~~l~~~~--~~-----~--~~~~~~~~~q-----------------l~~aL~~LH-- 118 (377)
T cd05629 81 EFLPGGDLM--------------TMLIKYD--TF-----S--EDVTRFYMAE-----------------CVLAIEAVH-- 118 (377)
T ss_pred eCCCCCcHH--------------HHHHhcC--CC-----C--HHHHHHHHHH-----------------HHHHHHHHH--
Confidence 999886542 1111100 00 0 1112222211 112222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.++||..+.
T Consensus 119 ------~~givHrDlkp~NIll~~~-~~~kl~DfGla~ 149 (377)
T cd05629 119 ------KLGFIHRDIKPDNILIDRG-GHIKLSDFGLST 149 (377)
T ss_pred ------hCCeeccCCCHHHEEECCC-CCEEEeeccccc
Confidence 2369999999999999886 789999999875
No 96
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.87 E-value=7.7e-05 Score=66.58 Aligned_cols=143 Identities=15% Similarity=0.130 Sum_probs=79.0
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i 115 (359)
+.++.|....+|++.........+..+++|....... .......|...++.+...++ .+++..+.. .++++|+
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNI-VKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCch-heEEEEEcCCCeeEEEEecc
Confidence 4567788889999976532111136788888764432 11223467788887744344 445544422 3899999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.++.. .+.. ...... + ......+.. .+...+..+
T Consensus 84 ~~~~l~~-------~~~~----------~~~~~~--~--~~~~~~~~~-----------------ql~~~l~~l------ 119 (258)
T smart00219 84 EGGDLLD-------YLRK----------NRPKEL--S--LSDLLSFAL-----------------QIARGMEYL------ 119 (258)
T ss_pred CCCCHHH-------HHHh----------hhhccC--C--HHHHHHHHH-----------------HHHHHHHHH------
Confidence 8865431 1100 000000 0 011111111 111112222
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
....++|+|++|+||+++++ +.+.++||+.+...
T Consensus 120 --h~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~ 153 (258)
T smart00219 120 --ESKNFIHRDLAARNCLVGEN-LVVKISDFGLSRDL 153 (258)
T ss_pred --hcCCeeecccccceEEEccC-CeEEEcccCCceec
Confidence 12378999999999999986 67999999987643
No 97
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.87 E-value=9.8e-05 Score=68.83 Aligned_cols=135 Identities=19% Similarity=0.167 Sum_probs=78.0
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---c-cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+..... . .......|..++..+..+...++++..+.. .+||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~ 77 (321)
T cd05591 2 VLGKGSFGKVMLAELKG----TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEY 77 (321)
T ss_pred ccccCCCeEEEEEEECC----CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeC
Confidence 35667788999997642 35788999875431 1 111123466666666555556666665532 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++. .. +.+-. .. + ......+.. .+...+..|.
T Consensus 78 ~~~~~L~----------~~----l~~~~--~~-----~--~~~~~~~~~-----------------qi~~aL~~LH---- 113 (321)
T cd05591 78 VNGGDLM----------FQ----IQRSR--KF-----D--EPRSRFYAA-----------------EVTLALMFLH---- 113 (321)
T ss_pred CCCCcHH----------HH----HHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 11 11000 00 0 011111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 114 ----~~~ivHrDikp~Nill~~~-~~~kL~Dfg~~~ 144 (321)
T cd05591 114 ----RHGVIYRDLKLDNILLDAE-GHCKLADFGMCK 144 (321)
T ss_pred ----HCCeeccCCCHHHeEECCC-CCEEEeecccce
Confidence 2268999999999999986 789999998765
No 98
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.86 E-value=8e-05 Score=69.30 Aligned_cols=139 Identities=16% Similarity=0.172 Sum_probs=76.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc---cchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF---FDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~---~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
+.|+.|....+|++..... ...+..+.+|+........ .....|..++..+...++. +++..+. + .+|+||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITG-PDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV-KLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEecc-CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcc-cEEEEEEcCCEEEEEEcC
Confidence 3566777889998864211 1136788899875432111 1123577777776544443 3444432 2 289999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. . .+ +... +.....+..+..+ +...+..|.
T Consensus 80 ~~~~~L~----------~----~l---~~~~------~l~~~~~~~~~~q-----------------i~~~l~~lH---- 115 (318)
T cd05582 80 LRGGDLF----------T----RL---SKEV------MFTEEDVKFYLAE-----------------LALALDHLH---- 115 (318)
T ss_pred CCCCcHH----------H----HH---HHcC------CCCHHHHHHHHHH-----------------HHHHHHHHH----
Confidence 9875431 1 11 1100 0001122222211 222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 116 ----~~~i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~ 147 (318)
T cd05582 116 ----SLGIIYRDLKPENILLDEE-GHIKLTDFGLSKE 147 (318)
T ss_pred ----HCCEecCCCCHHHeEECCC-CcEEEeeccCCcc
Confidence 2368999999999999886 7899999987653
No 99
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.83 E-value=0.00018 Score=64.36 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=28.9
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.||+++++ +.+.++||+.+..-
T Consensus 128 ~~~i~h~dl~p~nili~~~-~~~kl~d~g~~~~~ 160 (265)
T cd08217 128 GNTVLHRDLKPANIFLDAN-NNVKLGDFGLAKIL 160 (265)
T ss_pred cCcceecCCCHHHEEEecC-CCEEEecccccccc
Confidence 5689999999999999986 78999999987753
No 100
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.83 E-value=4.8e-05 Score=70.88 Aligned_cols=135 Identities=18% Similarity=0.181 Sum_probs=78.4
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+..... ........|..+++.+..+...++++..... .+|+||
T Consensus 2 ~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 77 (318)
T cd05570 2 VLGKGSFGKVLLAELKG----TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEY 77 (318)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence 35667778999997642 35788899875321 1111123567777766655556777765532 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..|. . .+.+-. .. + ......+.. ++...+..|.
T Consensus 78 ~~~~~L~----------~----~~~~~~--~l-----~--~~~~~~~~~-----------------qi~~~l~~LH---- 113 (318)
T cd05570 78 VNGGDLM----------F----HIQRSG--RF-----D--EPRARFYAA-----------------EIVLGLQFLH---- 113 (318)
T ss_pred CCCCCHH----------H----HHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 0 011100 00 0 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 114 ----~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 144 (318)
T cd05570 114 ----ERGIIYRDLKLDNVLLDSE-GHIKIADFGMCK 144 (318)
T ss_pred ----hCCeEccCCCHHHeEECCC-CcEEecccCCCe
Confidence 2368999999999999986 789999998764
No 101
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.82 E-value=0.00026 Score=64.77 Aligned_cols=142 Identities=14% Similarity=0.163 Sum_probs=79.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC---------CceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH---------NGRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~---------~g~v 111 (359)
...+..|....+|++.... .+..+++|+.............|..+++.+.++.-.++++..+. -.+|
T Consensus 27 ~~~l~~g~~~~vy~~~~~~----~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKK----DGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred EEEeecCCCeEEEEEEECC----CCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence 3566777888999997542 36788889875432111122457777777755444455554321 1379
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|.++.. . +..... .... .. ...+.... ..+...+..+.
T Consensus 103 ~ey~~~~sL~~-------~-------~~~~~~---~~~~-~~-~~~~~~~~-----------------~qi~~al~~lH- 145 (291)
T cd06639 103 LELCNGGSVTE-------L-------VKGLLI---CGQR-LD-EAMISYIL-----------------YGALLGLQHLH- 145 (291)
T ss_pred EEECCCCcHHH-------H-------HHHhhh---cCCC-CC-HHHHHHHH-----------------HHHHHHHHHHH-
Confidence 99999866531 1 111000 0000 00 11111111 01111222221
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||..+..
T Consensus 146 -------~~~ivH~dlkp~nili~~~-~~~kl~dfg~~~~ 177 (291)
T cd06639 146 -------NNRIIHRDVKGNNILLTTE-GGVKLVDFGVSAQ 177 (291)
T ss_pred -------hCCeeccCCCHHHEEEcCC-CCEEEeecccchh
Confidence 2368999999999999886 7899999997653
No 102
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.82 E-value=0.00042 Score=64.88 Aligned_cols=138 Identities=14% Similarity=0.160 Sum_probs=78.4
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-cccc-chHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EVFF-DRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEE 113 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e 113 (359)
.++.|+.|....+|++.... .+..+.+|+..... .... ...+|..+++.+...++. +++... .+ .+|+|
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKP----SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV-GFYGAFYSDGEISICME 83 (331)
T ss_pred EEEeecCCCCEEEEEEEECC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCC-eEEEEEEECCEEEEEee
Confidence 45678888889999998642 35677788765432 1111 124677777777544443 344433 22 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.+|.. . +.+-. .. + ...+..+.. .+...+..+.
T Consensus 84 ~~~~~~L~~-------~-------l~~~~--~~-----~--~~~~~~~~~-----------------~i~~~l~~lH--- 120 (331)
T cd06649 84 HMDGGSLDQ-------V-------LKEAK--RI-----P--EEILGKVSI-----------------AVLRGLAYLR--- 120 (331)
T ss_pred cCCCCcHHH-------H-------HHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHh---
Confidence 999866531 1 11000 00 1 011111111 1112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
....++|+|++|.||+++++ +.+.|+||..+.
T Consensus 121 ----~~~~ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~ 152 (331)
T cd06649 121 ----EKHQIMHRDVKPSNILVNSR-GEIKLCDFGVSG 152 (331)
T ss_pred ----hcCCEEcCCCChhhEEEcCC-CcEEEccCcccc
Confidence 11258999999999999986 789999998765
No 103
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.81 E-value=1.8e-05 Score=72.14 Aligned_cols=125 Identities=17% Similarity=0.305 Sum_probs=82.2
Q ss_pred cCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--------------------ccch---HHHHHHHHHHhcCCC-Cc
Q 018207 45 KGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--------------------FFDR---NDEIRTFEFMSKHGQ-GP 100 (359)
Q Consensus 45 ~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--------------------~~dr---~~E~~~l~~l~~~gl-~P 100 (359)
+-|-...+|.+... +|..+++|+.+-+.-. ...| .+|.+.++.|.++|. +|
T Consensus 101 GVGKESDIY~v~d~-----~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpVP 175 (465)
T KOG2268|consen 101 GVGKESDIYVVADE-----EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPVP 175 (465)
T ss_pred ccccccceEEEecC-----CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCCC
Confidence 33667778888643 3678888776543111 0112 468999999999998 79
Q ss_pred eeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHH
Q 018207 101 RLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLD 180 (359)
Q Consensus 101 ~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
+++-.+....||+.|+|-|+.. +|.+.-+ |.++..+
T Consensus 176 kpiD~~RH~Vvmelv~g~Pl~~------------------v~~v~d~----~~ly~~l---------------------- 211 (465)
T KOG2268|consen 176 KPIDHNRHCVVMELVDGYPLRQ------------------VRHVEDP----PTLYDDL---------------------- 211 (465)
T ss_pred CcccccceeeHHHhhcccceee------------------eeecCCh----HHHHHHH----------------------
Confidence 9998888899999999987652 2221111 2222111
Q ss_pred HHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 181 AIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 181 ~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
+..+.+.. ..+++||||+--|||+.++ +.+++|||--+
T Consensus 212 -----m~~Iv~la-----~~GlIHgDFNEFNimv~dd-~~i~vIDFPQm 249 (465)
T KOG2268|consen 212 -----MGLIVRLA-----NHGLIHGDFNEFNIMVKDD-DKIVVIDFPQM 249 (465)
T ss_pred -----HHHHHHHH-----HcCceecccchheeEEecC-CCEEEeechHh
Confidence 11111211 2389999999999999986 78999999654
No 104
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.81 E-value=0.00019 Score=67.20 Aligned_cols=140 Identities=15% Similarity=0.216 Sum_probs=79.9
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----cccc-chHHHHHHHHHHhcCCCCceeEEEeC-C---ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFF-DRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v 111 (359)
++.|+.|....+|++..... ...+..+.+|+..... .... ....|..+++.+..+...++++..+. + .+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTG-HDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI 83 (332)
T ss_pred EEEEeecCCEEEEEEEEccc-CCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence 46677788899999875311 1135778899875321 0111 12357777777765555555655543 2 289
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..+. .. +.+ +. .. + ...+..+.. ++...+..|.
T Consensus 84 ~e~~~~g~L~----------~~----l~~-~~-~~-----~--~~~~~~~~~-----------------qi~~~l~~lH- 122 (332)
T cd05614 84 LDYVSGGEMF----------TH----LYQ-RD-NF-----S--EDEVRFYSG-----------------EIILALEHLH- 122 (332)
T ss_pred EeCCCCCcHH----------HH----HHH-cC-CC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 9999885432 11 110 00 00 0 111222221 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 123 -------~~~ivHrDlkp~Nili~~~-~~~kl~DfG~~~ 153 (332)
T cd05614 123 -------KLGIVYRDIKLENILLDSE-GHVVLTDFGLSK 153 (332)
T ss_pred -------HCCcEecCCCHHHeEECCC-CCEEEeeCcCCc
Confidence 2368999999999999986 789999998765
No 105
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.80 E-value=6.5e-05 Score=69.19 Aligned_cols=136 Identities=13% Similarity=0.129 Sum_probs=77.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccc-hHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFD-RNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
-++.++.|..+.+|++.... .+..+++|........... ...|..+++.+...++.+ ++..+. + .+|+||
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 23 RFEKIGQGASGTVYTAIDIA----TGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVN-YLDSYLVGDELWVVMEY 97 (297)
T ss_pred eeeeeccCCCeEEEEEEECC----CCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEee-EEEEEecCCEEEEeecc
Confidence 45667778889999997532 3688999987543211111 134666666654444443 443332 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. . +. .... + ...+..+.. .+...+..|.
T Consensus 98 ~~~~~L~~-------~-------~~---~~~~-----~--~~~~~~~~~-----------------~l~~~L~~LH---- 132 (297)
T cd06656 98 LAGGSLTD-------V-------VT---ETCM-----D--EGQIAAVCR-----------------ECLQALDFLH---- 132 (297)
T ss_pred cCCCCHHH-------H-------HH---hCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 99875431 1 10 0000 0 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|+||+++.+ +.+.++||+.+.
T Consensus 133 ----~~~i~H~dL~p~Nili~~~-~~~~l~Dfg~~~ 163 (297)
T cd06656 133 ----SNQVIHRDIKSDNILLGMD-GSVKLTDFGFCA 163 (297)
T ss_pred ----HCCcccCCCCHHHEEECCC-CCEEECcCccce
Confidence 1268999999999999886 789999998765
No 106
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.80 E-value=8.5e-05 Score=68.35 Aligned_cols=144 Identities=13% Similarity=0.178 Sum_probs=82.6
Q ss_pred eEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccch--HHHHHHHHHHhcCCCCceeEEEe-CCc----eE
Q 018207 39 LQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDR--NDEIRTFEFMSKHGQGPRLLGRF-HNG----RV 111 (359)
Q Consensus 39 ~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr--~~E~~~l~~l~~~gl~P~~~~~~-~~g----~v 111 (359)
..+..|+.|...+||++...+ .+.-+.+|.-....+..+.+ .+|.++++.. .+-..-++|+.+ .++ ++
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~----t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKP----TGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcC----CCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEee
Confidence 356778889999999998764 25666677653332221111 3566666554 333344566655 223 68
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||.+|-.|+. +...++ . . |. ..+..-.. .+.+-+..|.
T Consensus 157 mEYMDgGSLd~-------~~k~~g-------~--i-----~E--~~L~~ia~-----------------~VL~GL~YLh- 195 (364)
T KOG0581|consen 157 MEYMDGGSLDD-------ILKRVG-------R--I-----PE--PVLGKIAR-----------------AVLRGLSYLH- 195 (364)
T ss_pred hhhcCCCCHHH-------HHhhcC-------C--C-----CH--HHHHHHHH-----------------HHHHHHHHHh-
Confidence 99999977641 111110 0 1 10 01110000 1111122222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchH
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVA 235 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~ 235 (359)
....++|+|++|.|||++.. +.|.|-||.-++.-...
T Consensus 196 ------~~~~IIHRDIKPsNlLvNsk-GeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 196 ------EERKIIHRDIKPSNLLVNSK-GEVKICDFGVSGILVNS 232 (364)
T ss_pred ------hccCeeeccCCHHHeeeccC-CCEEeccccccHHhhhh
Confidence 23589999999999999986 89999999988764433
No 107
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.80 E-value=0.0002 Score=68.09 Aligned_cols=138 Identities=14% Similarity=0.203 Sum_probs=78.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
.++.|+.|....+|++.... .+..+.+|+..... ........|..++..+.... .++++....+ .+|
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~-iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKD----TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW-VVKMFYSFQDKLNLYLI 79 (363)
T ss_pred EeEEEEeCCCEEEEEEEECC----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCC-cceEEEEEecCCeEEEE
Confidence 35677888899999997542 36789999875321 01111234666666554332 3445544432 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|..|. .. +. ... . .. ......+..+ +...+..|.
T Consensus 80 ~E~~~gg~L~----------~~----l~---~~~----~-l~-~~~~~~~~~q-----------------i~~aL~~lH- 118 (363)
T cd05628 80 MEFLPGGDMM----------TL----LM---KKD----T-LT-EEETQFYIAE-----------------TVLAIDSIH- 118 (363)
T ss_pred EcCCCCCcHH----------HH----HH---hcC----C-CC-HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 9999885442 11 11 100 0 00 1112212211 111222221
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.|||++.+ +.+.|+||..|..
T Consensus 119 -------~~givHrDlKp~NILi~~~-~~vkL~DFGla~~ 150 (363)
T cd05628 119 -------QLGFIHRDIKPDNLLLDSK-GHVKLSDFGLCTG 150 (363)
T ss_pred -------hCCeEecCCCHHHeEECCC-CCEEEeeccCccc
Confidence 2378999999999999886 7899999998764
No 108
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.80 E-value=0.00021 Score=65.39 Aligned_cols=140 Identities=14% Similarity=0.016 Sum_probs=77.7
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-c--c-ccchHHHHHHHHHHhcCCCCceeEEEe-C-C--ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-E--V-FFDRNDEIRTFEFMSKHGQGPRLLGRF-H-N--GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~--~-~~dr~~E~~~l~~l~~~gl~P~~~~~~-~-~--g~v 111 (359)
.++.|+.|....+|++.... .+..+.+|...... . . ......|..++..+....+.+ ++... . + .++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~-~~~~~~~~~~~~lv 78 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVS-LAYAYETKDALCLV 78 (285)
T ss_pred EEEEEecCCCEEEEEEEEec----CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEE-EEEEEccCCeEEEE
Confidence 35668888889999997642 36788899765321 1 0 011235777777765544433 33332 2 2 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||.+|..+.. . +.. +. ..+. + ......+.. .+...+..|.
T Consensus 79 ~e~~~~g~L~~-------~-------~~~-~~-~~~~---~--~~~~~~~~~-----------------qi~~~l~~lH- 119 (285)
T cd05631 79 LTIMNGGDLKF-------H-------IYN-MG-NPGF---D--EQRAIFYAA-----------------ELCCGLEDLQ- 119 (285)
T ss_pred EEecCCCcHHH-------H-------HHh-hC-CCCC---C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998865421 0 000 00 0000 0 111111111 1112222221
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.|||++++ +.+.|+||..+..
T Consensus 120 -------~~~iiH~dikp~Nill~~~-~~~kl~Dfg~~~~ 151 (285)
T cd05631 120 -------RERIVYRDLKPENILLDDR-GHIRISDLGLAVQ 151 (285)
T ss_pred -------hCCEEeCCCCHHHEEECCC-CCEEEeeCCCcEE
Confidence 2368999999999999886 7899999987754
No 109
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.78 E-value=0.00011 Score=67.56 Aligned_cols=137 Identities=13% Similarity=0.128 Sum_probs=77.4
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccc-hHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFD-RNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.++.++.|....+|++.... .++.+++|..........+ ...|..+++.+...++. +++..... .+|+||
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVA----TGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIV-NFLDSFLVGDELFVVMEY 97 (296)
T ss_pred EEEEEecCCCeEEEEEEEcC----CCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCcee-eeeeeEecCceEEEEEEe
Confidence 45677888888999986432 3688999877543211111 13567777766544443 44444322 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+.. .+. .... . ......... .+...+..|.
T Consensus 98 ~~~~~L~~--------------~~~---~~~l------~-~~~~~~i~~-----------------~l~~al~~LH---- 132 (296)
T cd06655 98 LAGGSLTD--------------VVT---ETCM------D-EAQIAAVCR-----------------ECLQALEFLH---- 132 (296)
T ss_pred cCCCcHHH--------------HHH---hcCC------C-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865431 111 0000 0 111111111 1112222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|||++|.||+++++ +.+.++||+.+..
T Consensus 133 ----~~~i~H~dL~p~Nili~~~-~~~kl~dfg~~~~ 164 (296)
T cd06655 133 ----ANQVIHRDIKSDNVLLGMD-GSVKLTDFGFCAQ 164 (296)
T ss_pred ----HCCcccCCCCHHHEEECCC-CCEEEccCccchh
Confidence 1257999999999999886 7899999987653
No 110
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.78 E-value=0.00012 Score=68.36 Aligned_cols=135 Identities=18% Similarity=0.190 Sum_probs=76.0
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+..... ........|..++..+..+...++++..+.+ .+||||
T Consensus 2 ~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey 77 (320)
T cd05590 2 VLGKGSFGKVMLARLKE----SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEF 77 (320)
T ss_pred eeeeCCCeEEEEEEEcC----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcC
Confidence 46678889999997642 35788899875321 1111123456666555445445566655432 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..|. ..+.+-+. . + ......+.. ++...+..|.
T Consensus 78 ~~~g~L~--------------~~i~~~~~--l-----~--~~~~~~~~~-----------------ql~~~L~~lH---- 113 (320)
T cd05590 78 VNGGDLM--------------FHIQKSRR--F-----D--EARARFYAA-----------------EITSALMFLH---- 113 (320)
T ss_pred CCCchHH--------------HHHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886442 11111000 0 0 011111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 114 ----~~~ivH~dlkp~NIli~~~-~~~kL~DfG~~~ 144 (320)
T cd05590 114 ----DKGIIYRDLKLDNVLLDHE-GHCKLADFGMCK 144 (320)
T ss_pred ----HCCeEeCCCCHHHeEECCC-CcEEEeeCCCCe
Confidence 2368999999999999986 789999998654
No 111
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.77 E-value=0.00013 Score=69.64 Aligned_cols=136 Identities=13% Similarity=0.170 Sum_probs=76.3
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--c--cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--E--VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
-++.|+.|....+|++.... .++.+.+|+..... . .......|..+++.+....+ .+++..+.+ .+|
T Consensus 47 ~~~~lG~G~fg~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-v~~~~~~~~~~~~~lv 121 (370)
T cd05621 47 VVKVIGRGAFGEVQLVRHKS----SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-VQLFCAFQDDKYLYMV 121 (370)
T ss_pred EEEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCE-eeEEEEEEcCCEEEEE
Confidence 45667888889999998643 36788888864321 0 00011245666655443333 344444322 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..|.. . +.. + .. + ......+.. .+...+..|.
T Consensus 122 ~Ey~~gg~L~~-------~-------l~~-~--~~-----~--~~~~~~~~~-----------------qil~aL~~LH- 159 (370)
T cd05621 122 MEYMPGGDLVN-------L-------MSN-Y--DV-----P--EKWAKFYTA-----------------EVVLALDAIH- 159 (370)
T ss_pred EcCCCCCcHHH-------H-------HHh-c--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999865531 1 111 1 11 1 011111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..|.
T Consensus 160 -------~~~IvHrDLKp~NILl~~~-~~~kL~DFG~a~ 190 (370)
T cd05621 160 -------SMGLIHRDVKPDNMLLDKH-GHLKLADFGTCM 190 (370)
T ss_pred -------HCCeEecCCCHHHEEECCC-CCEEEEecccce
Confidence 2369999999999999986 789999998775
No 112
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.77 E-value=0.00038 Score=61.59 Aligned_cols=139 Identities=16% Similarity=0.163 Sum_probs=79.5
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~ 116 (359)
+.++.|....+|++.... .+..+++|....... .......|...++.+... -.++++.... + .++++|++
T Consensus 6 ~~l~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 6 EKIGKGGFGEVYKARHKR----TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHP-NIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred eeeccCCceEEEEEEECC----CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCC-CEeEEEEEEecCCeEEEEEecCC
Confidence 567777788999998642 367899998865432 112234677777666632 2344554432 2 37899998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. .+.. +. . +.....+..+.. .+.+.+..+.
T Consensus 81 ~~~L~~--------------~~~~-~~--~-----~~~~~~~~~i~~-----------------~i~~~l~~lh------ 115 (253)
T cd05122 81 GGSLKD--------------LLKS-TN--Q-----TLTESQIAYVCK-----------------ELLKGLEYLH------ 115 (253)
T ss_pred CCcHHH--------------HHhh-cC--C-----CCCHHHHHHHHH-----------------HHHHHHHHhh------
Confidence 876531 1110 00 0 000111111111 1111122221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
...++|||++|.||+++++ +.+.|+||+.+..-.
T Consensus 116 --~~~i~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~ 149 (253)
T cd05122 116 --SNGIIHRDIKAANILLTSD-GEVKLIDFGLSAQLS 149 (253)
T ss_pred --cCCEecCCCCHHHEEEccC-CeEEEeecccccccc
Confidence 1468999999999999986 789999999776543
No 113
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.77 E-value=0.00036 Score=65.11 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=26.5
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.|||++++ +.+.|+||..+.
T Consensus 115 ~~ivHrDikp~NIll~~~-~~~kL~Dfg~~~ 144 (325)
T cd05594 115 KNVVYRDLKLENLMLDKD-GHIKITDFGLCK 144 (325)
T ss_pred CCEEecCCCCCeEEECCC-CCEEEecCCCCe
Confidence 379999999999999986 789999998764
No 114
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.76 E-value=9.6e-05 Score=67.53 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=79.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc----c-ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE----V-FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~----~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
.+.|+.|....+|++...... ..+..+.+|+...... . ......|.++++.+..+...++++..+.. .+|
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 83 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGH-DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI 83 (288)
T ss_pred EEEeccCCCceEEEEEEeccc-cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence 356777888899988643211 1357788888753211 1 11124678888877666555555554432 279
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|.++.. .+ +.. . +.....+..|.. ++.+.+..|.
T Consensus 84 ~e~~~~~~L~~----------~~-------~~~---~---~~~~~~~~~~~~-----------------ql~~~l~~lH- 122 (288)
T cd05583 84 LDYVNGGELFT----------HL-------YQR---E---HFTESEVRVYIA-----------------EIVLALDHLH- 122 (288)
T ss_pred EecCCCCcHHH----------HH-------hhc---C---CcCHHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998765421 11 000 0 000111222221 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 123 -------~~~~~H~dl~p~nil~~~~-~~~~l~dfg~~~~ 154 (288)
T cd05583 123 -------QLGIIYRDIKLENILLDSE-GHVVLTDFGLSKE 154 (288)
T ss_pred -------HCCeeccCCCHHHeEECCC-CCEEEEECccccc
Confidence 2368999999999999886 7899999986643
No 115
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.76 E-value=0.00018 Score=64.77 Aligned_cols=138 Identities=19% Similarity=0.221 Sum_probs=78.0
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe-CC---ceEEEeecC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF-HN---GRVEEFINA 117 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~---g~v~e~i~G 117 (359)
..++.|....+|++.... .+..+++|+.........+...|..+++.+...++.+ ++... .+ .+++||++|
T Consensus 12 ~~ig~g~~~~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~~ 86 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPPFYIITEFMTY 86 (263)
T ss_pred eecCCcccceEEEEEEec----CCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhh-eEEEEcCCCCcEEEEEeCCC
Confidence 456667788999987542 3678889987643221122346788887775544444 33333 22 378999988
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++.. .+..-+.... + ...+..+.. .+.+.+..|.
T Consensus 87 ~~L~~--------------~~~~~~~~~l-----~--~~~~~~~~~-----------------ql~~~l~~lH------- 121 (263)
T cd05052 87 GNLLD--------------YLRECNRQEV-----N--AVVLLYMAT-----------------QISSAMEYLE------- 121 (263)
T ss_pred CcHHH--------------HHHhCCCCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 65531 1111110000 0 111111111 1222222222
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 122 -~~~i~H~dlkp~nil~~~~-~~~kl~df~~~~~ 153 (263)
T cd05052 122 -KKNFIHRDLAARNCLVGEN-HLVKVADFGLSRL 153 (263)
T ss_pred -hCCEeecccCcceEEEcCC-CcEEeCCCccccc
Confidence 2368999999999999886 7899999998754
No 116
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.76 E-value=0.00021 Score=68.32 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=79.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
.++.|+.|....||++.... .+..+.+|+..... ........|..+++.+.... .++++..+.+ .+|
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~-iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVD----THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEW-VVKLYYSFQDKDNLYFV 79 (381)
T ss_pred EEEEEeecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCC-eeeeEEEEecCCEEEEE
Confidence 56778889999999997643 36789999875321 11111235777776664333 3445554432 279
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|..|. ..+.+.. .. + ......+.. ++...+..|.
T Consensus 80 ~E~~~gg~L~--------------~~l~~~~--~~-----~--e~~~~~~~~-----------------qi~~aL~~LH- 118 (381)
T cd05626 80 MDYIPGGDMM--------------SLLIRME--VF-----P--EVLARFYIA-----------------ELTLAIESVH- 118 (381)
T ss_pred EecCCCCcHH--------------HHHHhcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 9999886432 1111100 00 1 011111211 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 119 -------~~givHrDlKp~Nili~~~-~~~kL~DFGl~~ 149 (381)
T cd05626 119 -------KMGFIHRDIKPDNILIDLD-GHIKLTDFGLCT 149 (381)
T ss_pred -------hCCeeecCCcHHHEEECCC-CCEEEeeCcCCc
Confidence 2368999999999999886 789999999764
No 117
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.75 E-value=0.00014 Score=67.68 Aligned_cols=135 Identities=16% Similarity=0.141 Sum_probs=76.1
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.|+.|....+|++.... .+..+++|+..... ........|..++..+..+...++++..+.+ .+||||
T Consensus 2 ~lg~G~~g~V~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~ 77 (316)
T cd05620 2 VLGKGSFGKVLLAELKG----KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEF 77 (316)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECC
Confidence 36677788999998653 36788899875421 1111123455555544445455666655432 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. .. +.+ + .. .. ......+.. ++...+..|.
T Consensus 78 ~~~g~L~----------~~----i~~-~-~~------~~-~~~~~~~~~-----------------qi~~~l~~lH---- 113 (316)
T cd05620 78 LNGGDLM----------FH----IQD-K-GR------FD-LYRATFYAA-----------------EIVCGLQFLH---- 113 (316)
T ss_pred CCCCcHH----------HH----HHH-c-CC------CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 11 110 0 00 00 011111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 114 ----~~~ivHrDlkp~Nil~~~~-~~~kl~Dfg~~~ 144 (316)
T cd05620 114 ----SKGIIYRDLKLDNVMLDRD-GHIKIADFGMCK 144 (316)
T ss_pred ----HCCeEecCCCHHHeEECCC-CCEEeCccCCCe
Confidence 2369999999999999986 789999998664
No 118
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.75 E-value=0.00013 Score=68.10 Aligned_cols=136 Identities=14% Similarity=0.137 Sum_probs=76.2
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcC--CCCceeEEEeCC----ce
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKH--GQGPRLLGRFHN----GR 110 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~--gl~P~~~~~~~~----g~ 110 (359)
++.|+.|....+|++.... .+..+++|+..... ........|..++..+... .-..+++..+.. .+
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKK----TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred EEEEeecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 4567778888999997542 36889999875321 1111123455555554432 223455554432 38
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
|+||++|..+. . .++.... . ......+.. .+...+..|.
T Consensus 80 v~E~~~~~~L~----------~-------~~~~~~l------~-~~~~~~~~~-----------------qi~~al~~lH 118 (324)
T cd05589 80 VMEYAAGGDLM----------M-------HIHTDVF------S-EPRAVFYAA-----------------CVVLGLQYLH 118 (324)
T ss_pred EEcCCCCCcHH----------H-------HhhcCCC------C-HHHHHHHHH-----------------HHHHHHHHHH
Confidence 99999886442 0 1111100 0 111111111 1112222222
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 119 --------~~~ivHrdlkp~Nill~~~-~~~kL~Dfg~~~ 149 (324)
T cd05589 119 --------ENKIVYRDLKLDNLLLDTE-GFVKIADFGLCK 149 (324)
T ss_pred --------hCCeEecCCCHHHeEECCC-CcEEeCcccCCc
Confidence 2368999999999999986 789999998765
No 119
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.75 E-value=0.00035 Score=63.87 Aligned_cols=142 Identities=13% Similarity=0.091 Sum_probs=80.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEe--C-C---ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRF--H-N---GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~-~---g~v 111 (359)
.++.++.|....+|++.... .+..+++|....... ......+|.++++.+...++.+ ++..+ . + .++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~-~~~~~~~~~~~~~~lv 79 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKN----TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVK-YYGAFLDESSSSIGIA 79 (287)
T ss_pred EEEEeccCCceEEEEEEECC----CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeee-eeeEEEccCCCeEEEE
Confidence 45778888888999998643 367888998764321 1112246777777776544444 43322 2 2 378
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..|.. . +..... +.... + ...+..+.. .+...+..+.
T Consensus 80 ~e~~~~~~L~~-------~---l~~~~~--~~~~l-----~--~~~~~~i~~-----------------~i~~~L~~lH- 122 (287)
T cd06621 80 MEYCEGGSLDS-------I---YKKVKK--RGGRI-----G--EKVLGKIAE-----------------SVLKGLSYLH- 122 (287)
T ss_pred EEecCCCCHHH-------H---HHHHHh--cCCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999876531 1 111110 10000 0 011111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 123 -------~~~i~H~dl~~~nil~~~~-~~~~l~dfg~~~~ 154 (287)
T cd06621 123 -------SRKIIHRDIKPSNILLTRK-GQVKLCDFGVSGE 154 (287)
T ss_pred -------HCCcccCCCCHHHEEEecC-CeEEEeecccccc
Confidence 2368999999999999986 7799999998754
No 120
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.74 E-value=0.00021 Score=66.67 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=78.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
.+.|+.|....+|++.... .+..+.+|+..... ........|..++..+......++++..+. + .+|+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKG----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred EEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667888899999997542 36789999875421 111111246666665555555566655443 2 3799
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..|. ..+.+... . + ......+.. .+...+..|.
T Consensus 81 Ey~~~g~L~--------------~~i~~~~~--l-----~--~~~~~~i~~-----------------qi~~al~~lH-- 118 (323)
T cd05615 81 EYVNGGDLM--------------YHIQQVGK--F-----K--EPQAVFYAA-----------------EISVGLFFLH-- 118 (323)
T ss_pred cCCCCCcHH--------------HHHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999886542 11111000 0 0 011111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 119 ------~~~ivHrDikp~Nill~~~-~~ikL~Dfg~~~ 149 (323)
T cd05615 119 ------RRGIIYRDLKLDNVMLDSE-GHIKIADFGMCK 149 (323)
T ss_pred ------HCCeeccCCCHHHeEECCC-CCEEEecccccc
Confidence 2368999999999999986 789999998764
No 121
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.74 E-value=0.00022 Score=66.79 Aligned_cols=135 Identities=19% Similarity=0.227 Sum_probs=78.9
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccc-hHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFD-RNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+..... ....+ ...|..+++.+..+...++++..+.. .+||||
T Consensus 2 ~lG~G~~g~V~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~ 77 (329)
T cd05588 2 VIGRGSYAKVLLVELKK----TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEF 77 (329)
T ss_pred eEeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeC
Confidence 36667788999997643 36788899875421 11111 24577777777665555666665532 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. . .+.+-+ .. + ......+.. ++...+..|.
T Consensus 78 ~~~g~L~----------~----~~~~~~--~l-----~--~~~~~~~~~-----------------qi~~~l~~lH---- 113 (329)
T cd05588 78 VSGGDLM----------F----HMQRQR--KL-----P--EEHARFYSA-----------------EISLALNFLH---- 113 (329)
T ss_pred CCCCCHH----------H----HHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 1 111100 00 0 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 114 ----~~~ivH~dlkp~Nili~~~-~~~kL~Dfg~~~ 144 (329)
T cd05588 114 ----ERGIIYRDLKLDNVLLDAE-GHIKLTDYGMCK 144 (329)
T ss_pred ----HCCeEecCCCHHHeEECCC-CCEEECcCcccc
Confidence 2379999999999999886 789999998765
No 122
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.74 E-value=0.00016 Score=67.39 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=26.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 116 ~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~ 145 (321)
T cd05603 116 NIIYRDLKPENILLDSQ-GHVVLTDFGLCKE 145 (321)
T ss_pred CeEeccCCHHHeEECCC-CCEEEccCCCCcc
Confidence 68999999999999986 7899999987653
No 123
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.73 E-value=0.00023 Score=63.47 Aligned_cols=136 Identities=16% Similarity=0.144 Sum_probs=76.1
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeec
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFIN 116 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~ 116 (359)
.|+.|....+|++.... .+..+++|........ ......|..+++.+...++ ++++..+.. .+|+||++
T Consensus 2 ~lg~g~~g~vy~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 76 (252)
T cd05084 2 RIGRGNFGEVFSGRLRA----DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-VRLIGVCTQKQPIYIVMELVQ 76 (252)
T ss_pred ccCcccCccEEEEEEec----CCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEcCCCCeEEEEeecc
Confidence 35667778999987642 3678889976543211 1112457777777754333 445544432 38999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. . + +.... . .. ......+.. .+...+..|.
T Consensus 77 ~~~L~~-------~-------~---~~~~~---~-~~-~~~~~~~~~-----------------qi~~~L~~lH------ 111 (252)
T cd05084 77 GGDFLT-------F-------L---RTEGP---R-LK-VKELIQMVE-----------------NAAAGMEYLE------ 111 (252)
T ss_pred CCcHHH-------H-------H---HhCCC---C-CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865421 1 1 11000 0 00 111111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 112 --~~~i~H~dl~p~nil~~~~-~~~kl~dfg~~~~ 143 (252)
T cd05084 112 --SKHCIHRDLAARNCLVTEK-NVLKISDFGMSRE 143 (252)
T ss_pred --hCCccccccchheEEEcCC-CcEEECccccCcc
Confidence 2258999999999999886 7799999988764
No 124
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.73 E-value=0.00022 Score=68.00 Aligned_cols=136 Identities=13% Similarity=0.176 Sum_probs=77.0
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v 111 (359)
-++.|+.|....+|++.... .+..+++|+..... ........|..+++.+....+ +++++... + .+|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i-v~~~~~~~~~~~~~lv 121 (370)
T cd05596 47 VIKVIGRGAFGEVQLVRHKS----SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI-VQLHYAFQDDKYLYMV 121 (370)
T ss_pred EEEEEeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCEEEEE
Confidence 34567778888999997643 36789999874321 000111346666666544333 44444433 2 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..|.. . + +.... +. .....+.. .+...+..|.
T Consensus 122 ~Ey~~gg~L~~-------~-------l---~~~~l-----~~--~~~~~~~~-----------------qi~~aL~~LH- 159 (370)
T cd05596 122 MEYMPGGDLVN-------L-------M---SNYDI-----PE--KWARFYTA-----------------EVVLALDAIH- 159 (370)
T ss_pred EcCCCCCcHHH-------H-------H---HhcCC-----CH--HHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999865421 1 1 11111 10 11111111 1222223332
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 160 -------~~~ivHrDLkp~NILl~~~-~~~kL~DfG~~~ 190 (370)
T cd05596 160 -------SMGFIHRDVKPDNMLLDKS-GHLKLADFGTCM 190 (370)
T ss_pred -------HCCeeccCCCHHHEEEcCC-CCEEEEecccee
Confidence 2368999999999999986 789999998763
No 125
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.73 E-value=0.00026 Score=69.92 Aligned_cols=140 Identities=16% Similarity=0.112 Sum_probs=74.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-cchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-FDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~ 116 (359)
+.++.|....+|++..... .+.++++|......... .....|..++..+...+ .++++..+. + .+||||++
T Consensus 73 ~~lg~G~~g~vy~a~~~~~---~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpn-iv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSD---PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFG-IVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEeCCCcEEEEEEEcCC---CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCC-EeEEEEEEEECCEEEEEEECCC
Confidence 4456677788898865421 14678888654322111 11134766666554333 345555443 2 38999999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.+|.. .+-..+ .... +-.......+.. .+...+..+.
T Consensus 149 gg~L~~----------~l~~~~----~~~~-----~l~~~~~~~i~~-----------------qi~~aL~~lH------ 186 (478)
T PTZ00267 149 GGDLNK----------QIKQRL----KEHL-----PFQEYEVGLLFY-----------------QIVLALDEVH------ 186 (478)
T ss_pred CCCHHH----------HHHHHH----hccC-----CCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 876631 110111 0000 100011111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||+.+.
T Consensus 187 --~~~ivHrDlkp~NIll~~~-~~~kL~DFgla~ 217 (478)
T PTZ00267 187 --SRKMMHRDLKSANIFLMPT-GIIKLGDFGFSK 217 (478)
T ss_pred --hCCEEECCcCHHhEEECCC-CcEEEEeCcCce
Confidence 2369999999999999986 789999998765
No 126
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.73 E-value=0.00035 Score=65.46 Aligned_cols=137 Identities=17% Similarity=0.195 Sum_probs=76.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---cccc-chHHHHHHHHHHhcCCCCceeEEEeC-C---ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFF-DRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~ 112 (359)
++.|+.|....+|++.... .++.+.+|+..... .... ....|..++..+.... .++++..+. + .+|+
T Consensus 6 ~~~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKN----TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW-ITNLHYAFQDENNLYLVM 80 (331)
T ss_pred EEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC-CCceEEEEecCCeEEEEE
Confidence 4667778889999997653 36789999875311 0000 1124566665543333 344555443 2 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..|. ..+.+.+. .. + ...+..+.. ++...+..+.
T Consensus 81 e~~~g~~L~--------------~~l~~~~~-~~-----~--~~~~~~~~~-----------------qi~~~l~~lH-- 119 (331)
T cd05597 81 DYYVGGDLL--------------TLLSKFED-RL-----P--EDMARFYLA-----------------EMVLAIDSVH-- 119 (331)
T ss_pred ecCCCCcHH--------------HHHHHhcC-CC-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999886543 11111111 00 0 111111211 1112222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 120 ------~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 150 (331)
T cd05597 120 ------QLGYVHRDIKPDNVLLDKN-GHIRLADFGSCL 150 (331)
T ss_pred ------hCCeEECCCCHHHEEECCC-CCEEEEECCcee
Confidence 2368999999999999886 789999998763
No 127
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.72 E-value=0.00017 Score=65.71 Aligned_cols=136 Identities=13% Similarity=0.058 Sum_probs=73.3
Q ss_pred cCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-c---cccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEeec
Q 018207 45 KGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-E---VFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEFIN 116 (359)
Q Consensus 45 ~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~---~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~i~ 116 (359)
+.|....+|++.... .+..+++|...... . .......|..+++.+....+ .++...+. + .+||||++
T Consensus 2 g~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 76 (280)
T cd05608 2 GKGGFGEVSACQMRA----TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-VSLAYAFQTKTDLCLVMTIMN 76 (280)
T ss_pred CCCCceeEEEEEEcc----CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcE-eeeeEEEcCCCeEEEEEeCCC
Confidence 456778999987542 36788888865321 1 11111357777777644333 33443332 2 38999999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. . +..... .... .. ......+.. ++...+..+.
T Consensus 77 ~g~L~~-------~-------~~~~~~---~~~~-l~-~~~~~~~~~-----------------qi~~~l~~lH------ 114 (280)
T cd05608 77 GGDLRY-------H-------IYNVDE---ENPG-FP-EPRACFYTA-----------------QIISGLEHLH------ 114 (280)
T ss_pred CCCHHH-------H-------HHhccc---cCCC-CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 866531 0 000000 0000 00 111111111 1222222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 115 --~~~i~H~dlkp~Nili~~~-~~~~l~dfg~~~ 145 (280)
T cd05608 115 --QRRIIYRDLKPENVLLDND-GNVRISDLGLAV 145 (280)
T ss_pred --HCCcccCCCCHHHEEECCC-CCEEEeeCccce
Confidence 2368999999999999886 789999998764
No 128
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.72 E-value=0.00043 Score=62.33 Aligned_cols=137 Identities=16% Similarity=0.227 Sum_probs=76.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC-C--ceEEEeecCC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N--GRVEEFINAR 118 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~--g~v~e~i~G~ 118 (359)
+.++.|..+.+|++.... +..+.+|+..........-..|.++++.+...++ .+++.... + .++++|++|.
T Consensus 12 ~~lg~g~~~~v~~~~~~~-----~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~lv~e~~~~~ 85 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNG-----TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-VQLYAVVSEEPIYIVTEYMSKG 85 (262)
T ss_pred eecCCCCCCcEEEEEecC-----CceEEEEecccCccCHHHHHHHHHHHHhCCCCCc-ceEEEEECCCCcEEEEEcCCCC
Confidence 456667788999997532 3568888876432111112467888887764443 33444333 2 3899999886
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCC
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQ 198 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 198 (359)
++.. .+ +... ... .. ......+.. .+.+.+..+.
T Consensus 86 ~L~~-------~~----------~~~~--~~~-~~-~~~~~~~~~-----------------~l~~aL~~lH-------- 119 (262)
T cd05071 86 SLLD-------FL----------KGEM--GKY-LR-LPQLVDMAA-----------------QIASGMAYVE-------- 119 (262)
T ss_pred cHHH-------HH----------hhcc--ccC-CC-HHHHHHHHH-----------------HHHHHHHHHH--------
Confidence 5421 11 0000 000 00 111111111 1222222222
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 120 ~~~i~H~dl~p~Nill~~~-~~~~L~dfg~~~~ 151 (262)
T cd05071 120 RMNYVHRDLRAANILVGEN-LVCKVADFGLARL 151 (262)
T ss_pred HCCccccccCcccEEEcCC-CcEEeccCCceee
Confidence 2368999999999999986 7789999988753
No 129
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.72 E-value=0.00022 Score=66.61 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=76.5
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc----cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE----VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
.+.|+.|....+|++.... .+..+++|+...... .......|..+++.+. +...++++..+.+ .+|+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKA----TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred EEEEEeccCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEEE
Confidence 4667778889999997542 367889998754311 1011134555555443 3334555544432 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..|. ..+.+. .... + ...+..++. .+...+..+.
T Consensus 81 e~~~~~~L~--------------~~l~~~-~~~l-----~--~~~~~~~~~-----------------qi~~aL~~lH-- 119 (330)
T cd05601 81 EYQPGGDLL--------------SLLNRY-EDQF-----D--EDMAQFYLA-----------------ELVLAIHSVH-- 119 (330)
T ss_pred CCCCCCCHH--------------HHHHHh-cCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999886542 111111 0000 0 111111211 1112222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 120 ------~~~i~H~Dlkp~NIll~~~-~~~kL~Dfg~a~ 150 (330)
T cd05601 120 ------QMGYVHRDIKPENVLIDRT-GHIKLADFGSAA 150 (330)
T ss_pred ------HCCeEcccCchHheEECCC-CCEEeccCCCCe
Confidence 2368999999999999986 789999998774
No 130
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.72 E-value=0.00012 Score=67.22 Aligned_cols=136 Identities=18% Similarity=0.132 Sum_probs=76.2
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
++.|+.|....+|++.... .++.+++|+..... ........|..+++.+...++. +++.... + .+|+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRI----SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFII-RLFWTEHDQRFLYMLM 80 (291)
T ss_pred eeeeecCCCeEEEEEEEcC----CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHh-hhHhhhccCCeEEEEE
Confidence 4667788889999997642 36788999874321 0111123577777766543332 3333322 2 3799
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..+. ..+.+-. .. + ......+.. ++...+..|.
T Consensus 81 e~~~~~~L~--------------~~~~~~~--~~-----~--~~~~~~~~~-----------------qi~~~l~~lH-- 118 (291)
T cd05612 81 EYVPGGELF--------------SYLRNSG--RF-----S--NSTGLFYAS-----------------EIVCALEYLH-- 118 (291)
T ss_pred eCCCCCCHH--------------HHHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999886542 1111100 00 0 011111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 119 ------~~~i~H~dlkp~NIli~~~-~~~kl~Dfg~~~ 149 (291)
T cd05612 119 ------SKEIVYRDLKPENILLDKE-GHIKLTDFGFAK 149 (291)
T ss_pred ------HCCeeecCCCHHHeEECCC-CCEEEEecCcch
Confidence 2368999999999999886 789999998765
No 131
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.71 E-value=0.00027 Score=66.21 Aligned_cols=135 Identities=17% Similarity=0.165 Sum_probs=75.5
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
.|+.|....+|++.... .+..+++|+..... ........|..+++.+....+ ++++.... + .+||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~~~~~~~~~~~~~lv~Ey 76 (328)
T cd05593 2 LLGKGTFGKVILVREKA----SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFL-TSLKYSFQTKDRLCFVMEY 76 (328)
T ss_pred eeeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-cceEEEEEcCCEEEEEEeC
Confidence 36677888999997542 36789999876431 111122356666665544333 33444332 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. . .+. .... .. ......+.. .+...+..|.
T Consensus 77 ~~~g~L~----------~----~l~---~~~~-----l~-~~~~~~~~~-----------------qi~~aL~~LH---- 112 (328)
T cd05593 77 VNGGELF----------F----HLS---RERV-----FS-EDRTRFYGA-----------------EIVSALDYLH---- 112 (328)
T ss_pred CCCCCHH----------H----HHH---hcCC-----CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9885542 0 011 0000 00 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.|||++++ +.+.|+||..+..
T Consensus 113 ----~~~ivHrDikp~NIll~~~-~~~kL~DfG~~~~ 144 (328)
T cd05593 113 ----SGKIVYRDLKLENLMLDKD-GHIKITDFGLCKE 144 (328)
T ss_pred ----hCCeEecccCHHHeEECCC-CcEEEecCcCCcc
Confidence 2368999999999999986 7899999997653
No 132
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.71 E-value=0.00044 Score=61.89 Aligned_cols=137 Identities=20% Similarity=0.227 Sum_probs=78.4
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEeec
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEFIN 116 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~i~ 116 (359)
++.|+.|....+|++.... +..+.+|..........+-..|..+++.+...++.+ ++..+. + .+++||.+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~-----~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRA-----QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQ-LYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred eeEecCCcCceEEEEEecc-----CceEEEEecccCCccHHHHHHHHHHHHHCCCCCcee-EEEEEccCCCEEEEEEcCC
Confidence 4567778888999987642 457888876543211112246888888776544443 443332 2 38999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+.. .+|... .. .. ......+.. .+...+..+.
T Consensus 83 ~~~L~~-----------------~~~~~~--~~--~~-~~~~~~~~~-----------------~i~~~l~~lH------ 117 (256)
T cd05114 83 NGCLLN-----------------YLRQRQ--GK--LS-KDMLLSMCQ-----------------DVCEGMEYLE------ 117 (256)
T ss_pred CCcHHH-----------------HHHhCc--cC--CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 765421 111110 00 00 111111111 1112222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 118 --~~~i~H~dl~p~ni~i~~~-~~~kl~d~g~~~~ 149 (256)
T cd05114 118 --RNSFIHRDLAARNCLVSST-GVVKVSDFGMTRY 149 (256)
T ss_pred --HCCccccccCcceEEEcCC-CeEEECCCCCccc
Confidence 2358999999999999886 7789999997764
No 133
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.71 E-value=0.00023 Score=66.64 Aligned_cols=135 Identities=18% Similarity=0.184 Sum_probs=78.3
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---cc-ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+..... .. ......|..++..+..+...++++..+.. .+|+||
T Consensus 2 ~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (327)
T cd05617 2 VIGRGSYAKVLLVRLKK----NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEY 77 (327)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 46677888999997643 35778888875431 11 11123566777666655555666655432 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+.. . +.+ .... + ......+.. .+...+..+.
T Consensus 78 ~~~~~L~~----------~----~~~--~~~l-----~--~~~~~~~~~-----------------qi~~al~~lH---- 113 (327)
T cd05617 78 VNGGDLMF----------H----MQR--QRKL-----P--EEHARFYAA-----------------EICIALNFLH---- 113 (327)
T ss_pred CCCCcHHH----------H----HHH--cCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865420 0 100 0000 0 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 114 ----~~~ivHrDlkp~Nili~~~-~~~kl~Dfg~~~ 144 (327)
T cd05617 114 ----ERGIIYRDLKLDNVLLDAD-GHIKLTDYGMCK 144 (327)
T ss_pred ----HCCeeccCCCHHHEEEeCC-CCEEEeccccce
Confidence 2368999999999999986 789999998764
No 134
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.70 E-value=0.00044 Score=63.17 Aligned_cols=140 Identities=14% Similarity=-0.018 Sum_probs=78.7
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---cc-ccchHHHHHHHHHHhcCCCCceeEEEeC-C--ceEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N--GRVE 112 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~--g~v~ 112 (359)
..+.|+.|....+|++.... .++.+.+|+..... .. ......|..+++.+....+.+....... + .+++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRA----TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEEecCCCeEEEEEEECC----CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 34667778889999987643 36788899875431 11 0112357888887766555543333322 2 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
+|++|..+.. .. +.... . +.....+..+.. ++...+..|.
T Consensus 80 e~~~~~~L~~-------~~----------~~~~~--~--~~~~~~~~~~~~-----------------ql~~~l~~lH-- 119 (285)
T cd05632 80 TIMNGGDLKF-------HI----------YNMGN--P--GFEEERALFYAA-----------------EILCGLEDLH-- 119 (285)
T ss_pred EeccCccHHH-------HH----------HHhcC--C--CCCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998855421 00 00000 0 000111111111 1112222221
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 120 ------~~~iiH~dikp~Nili~~~-~~~kl~Dfg~~~ 150 (285)
T cd05632 120 ------RENTVYRDLKPENILLDDY-GHIRISDLGLAV 150 (285)
T ss_pred ------hCCeeecCCCHHHEEECCC-CCEEEecCCcce
Confidence 2268999999999999886 688999999774
No 135
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.70 E-value=0.00031 Score=63.04 Aligned_cols=136 Identities=13% Similarity=0.154 Sum_probs=77.1
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc------ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV------FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~------~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
+.++.|....+|.+.... .+..+++|........ ......|..+++.+...++ .+++....+ .++
T Consensus 8 ~~lg~g~~~~vy~~~~~~----~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v 82 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVD----TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI-VQYYGCLRDDETLSIF 82 (263)
T ss_pred ceecCCCceEEEEEEEcC----CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEccCCeEEEE
Confidence 567777778899986532 3678999887533110 1122457777776654444 344444432 378
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..+.. . +.+. . .. + ......+.. .+...+..|.
T Consensus 83 ~e~~~~~~l~~-------~-------~~~~-~-~~-----~--~~~~~~~~~-----------------~l~~~l~~lH- 121 (263)
T cd06625 83 MEYMPGGSVKD-------Q-------LKAY-G-AL-----T--ETVTRKYTR-----------------QILEGVEYLH- 121 (263)
T ss_pred EEECCCCcHHH-------H-------HHHh-C-CC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998866421 1 1110 0 00 0 011111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 122 -------~~~i~H~dl~p~nilv~~~-~~~~l~dfg~~~~ 153 (263)
T cd06625 122 -------SNMIVHRDIKGANILRDSA-GNVKLGDFGASKR 153 (263)
T ss_pred -------hCCeecCCCCHHHEEEcCC-CCEEEeeccccee
Confidence 2368999999999999986 7899999998754
No 136
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.69 E-value=0.00032 Score=65.42 Aligned_cols=135 Identities=18% Similarity=0.154 Sum_probs=75.1
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+..... ........|..+++.+....+. +++..+. + .+||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~-~~~~~~~~~~~~~lv~e~ 76 (323)
T cd05571 2 LLGKGTFGKVILVREKA----TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLT-ALKYSFQTHDRLCFVMEY 76 (323)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCC-CEEEEEEcCCEEEEEEeC
Confidence 36678889999997542 36789999875321 1111123466666666543333 3433332 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. . .+. ... +.....+..+.. ++...+..|.
T Consensus 77 ~~~~~L~----------~----~l~---~~~------~~~~~~~~~~~~-----------------qi~~~L~~lH---- 112 (323)
T cd05571 77 ANGGELF----------F----HLS---RER------VFSEDRARFYGA-----------------EIVSALGYLH---- 112 (323)
T ss_pred CCCCcHH----------H----HHH---HcC------CCCHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 1 111 000 000111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 113 ----~~~ivHrDlkp~NIll~~~-~~~kl~DfG~a~~ 144 (323)
T cd05571 113 ----SCDVVYRDLKLENLMLDKD-GHIKITDFGLCKE 144 (323)
T ss_pred ----hCCeEeCCCCHHHEEECCC-CCEEEeeCCCCcc
Confidence 2368999999999999886 7899999997653
No 137
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.68 E-value=0.00042 Score=62.14 Aligned_cols=137 Identities=19% Similarity=0.213 Sum_probs=78.0
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeecC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFINA 117 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~G 117 (359)
+.++.|....+|++... ++..+++|..........+...|..+++.+.... .++++..... ++++||++|
T Consensus 12 ~~ig~g~~~~v~~~~~~-----~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~e~~~~ 85 (261)
T cd05034 12 RKLGAGQFGEVWMGTWN-----GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDK-LVQLYAVCSEEEPIYIVTEYMSK 85 (261)
T ss_pred eeeccCcceEEEEEEEc-----CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCC-EeeeeeeeecCCceEEEEeccCC
Confidence 55677778899998753 2467889887644222122346777777765433 3445544432 389999988
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++.. . + +... .. ... ......+.. .+...+..+.
T Consensus 86 ~~L~~-------~-------i---~~~~--~~-~~~-~~~~~~~~~-----------------~i~~al~~lh------- 120 (261)
T cd05034 86 GSLLD-------F-------L---KSGE--GK-KLR-LPQLVDMAA-----------------QIAEGMAYLE------- 120 (261)
T ss_pred CCHHH-------H-------H---hccc--cC-CCC-HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 76531 1 1 1100 00 001 111111111 1112222221
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 121 -~~~i~h~di~p~nili~~~-~~~~l~d~g~~~~ 152 (261)
T cd05034 121 -SRNYIHRDLAARNILVGEN-LVCKIADFGLARL 152 (261)
T ss_pred -hCCcccCCcchheEEEcCC-CCEEECcccccee
Confidence 2258999999999999986 7899999987654
No 138
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.68 E-value=0.00067 Score=66.86 Aligned_cols=43 Identities=28% Similarity=0.378 Sum_probs=33.5
Q ss_pred eeEEeccCCCCCeeEeC---CCCceEEEEEeeccCCchHH--hHHHHH
Q 018207 200 IGFCHNDLQYGNIMIDE---VTKSITLIDYEYASYNPVAY--DIANHF 242 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~---~~~~v~lIDwE~a~~~~~~~--Dla~~~ 242 (359)
.++.|+|.|||||++++ .+..+++.|+...+.-+.-+ |++.++
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~ 367 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELW 367 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHH
Confidence 36999999999999994 24788999999888777655 555444
No 139
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.68 E-value=0.00019 Score=67.03 Aligned_cols=140 Identities=18% Similarity=0.250 Sum_probs=85.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccch-HHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFDR-NDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr-~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
++.|+.|...+||+++... .+.-+-+|+-.... ..-..| +.|..+|.. -++-+-|.+|..++. +++|
T Consensus 82 lk~LG~GdiG~VyL~~l~~----t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~-lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRG----TNCLFAMKVMDKESLASRKKLKRAQTEREILSL-LDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHcCCCCceeEEEEEecC----CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHh-cCCCccchhhheeeccceeEEEE
Confidence 4567889999999998763 24677788865431 111122 457777754 345678999998853 4899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||.+|..|.. | .|.. |...-+. ...+-|.. ++.-+++.|
T Consensus 157 eyCpGGdL~~---------------L--rqkQ--p~~~fse--~~aRFYaA-----------------Evl~ALEYL--- 195 (459)
T KOG0610|consen 157 EYCPGGDLHS---------------L--RQKQ--PGKRFSE--SAARFYAA-----------------EVLLALEYL--- 195 (459)
T ss_pred ecCCCccHHH---------------H--HhhC--CCCccch--hhHHHHHH-----------------HHHHHHHHH---
Confidence 9999976541 0 1111 1111010 11121221 111122222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
.-.+++=+||+|.|||+.++ |-+.|.|||.+...
T Consensus 196 -----HmlGivYRDLKPENILvred-GHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 196 -----HMLGIVYRDLKPENILVRED-GHIMLSDFDLSLRC 229 (459)
T ss_pred -----HhhceeeccCCcceeEEecC-CcEEeeeccccccC
Confidence 12489999999999999997 78999999998765
No 140
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.68 E-value=0.00074 Score=62.57 Aligned_cols=141 Identities=16% Similarity=0.181 Sum_probs=80.5
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc---c-cchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV---F-FDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~---~-~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
.+.++.|..+.+|++.... .+..+++|........ . .....|..+++.+...+ .++++....+ .+++
T Consensus 6 ~~~ig~g~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKG----TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPF-LPTLYASFQTETYLCLVM 80 (316)
T ss_pred eeeecCCccEEEEEEEEcC----CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCC-chhheeeeecCCEEEEEE
Confidence 3567778889999997642 3688999987643211 1 11235677777666433 3445544432 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..+.. .+.+-. ....+ ......+.. ++.+.+..|.
T Consensus 81 e~~~~~~L~~--------------~~~~~~-----~~~l~--~~~~~~~~~-----------------qi~~~l~~lH-- 120 (316)
T cd05574 81 DYCPGGELFR--------------LLQRQP-----GKCLS--EEVARFYAA-----------------EVLLALEYLH-- 120 (316)
T ss_pred EecCCCCHHH--------------HHHhCC-----CCccC--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998876421 111100 00000 111111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
...++|+|++|.||+++++ +.+.|+||+.+...+
T Consensus 121 ------~~~i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~ 154 (316)
T cd05574 121 ------LLGIVYRDLKPENILLHES-GHIMLSDFDLSKQSD 154 (316)
T ss_pred ------HCCeeccCCChHHeEEcCC-CCEEEeecchhhccc
Confidence 2368999999999999986 789999999877543
No 141
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=97.68 E-value=0.00024 Score=68.46 Aligned_cols=144 Identities=16% Similarity=0.163 Sum_probs=87.1
Q ss_pred CeEE-EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----
Q 018207 38 SLQV-IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN---- 108 (359)
Q Consensus 38 ~~~i-~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~---- 108 (359)
++.+ +.++.|.-.+||+.+-.. .++.|-+||-.+.- ...-....|..++..|+.+--.-++++.+.+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~----t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKA----TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred hcchhheeccccceeEEEeeecC----CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3444 445779999999997553 36788888764320 0111123688899999866555688888865
Q ss_pred ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHH
Q 018207 109 GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEIST 188 (359)
Q Consensus 109 g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 188 (359)
+.|++|.++-.| |.-||.... .+ +...+|.. .++...++.
T Consensus 150 YFvLe~A~nGdl-----------------l~~i~K~Gs-----fd--e~caR~YA----------------AeIldAley 189 (604)
T KOG0592|consen 150 YFVLEYAPNGDL-----------------LDLIKKYGS-----FD--ETCARFYA----------------AEILDALEY 189 (604)
T ss_pred EEEEEecCCCcH-----------------HHHHHHhCc-----ch--HHHHHHHH----------------HHHHHHHHH
Confidence 378999876322 112222100 00 00111110 112122222
Q ss_pred HHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 189 LEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 189 l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
| +..+++|+|++|.|||++++ +.+.|-||.-|..-++
T Consensus 190 l--------H~~GIIHRDlKPENILLd~d-mhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 190 L--------HSNGIIHRDLKPENILLDKD-GHIKITDFGSAKILSP 226 (604)
T ss_pred H--------HhcCceeccCChhheeEcCC-CcEEEeeccccccCCh
Confidence 2 34599999999999999997 8899999998876444
No 142
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.68 E-value=0.00055 Score=61.44 Aligned_cols=137 Identities=16% Similarity=0.221 Sum_probs=77.7
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC---CceEEEeecCC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH---NGRVEEFINAR 118 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~---~g~v~e~i~G~ 118 (359)
+.++.|....+|++... .+..+++|..........+...|..+++.+...++.+ ++.... -.++++|++|.
T Consensus 12 ~~ig~g~~~~v~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~-~~~~~~~~~~~lv~e~~~~~ 85 (260)
T cd05070 12 KKLGNGQFGEVWMGTWN-----GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQ-LYAVVSEEPIYIVTEYMSKG 85 (260)
T ss_pred heeccccCceEEEEEec-----CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEE-EEeEECCCCcEEEEEecCCC
Confidence 55777778899999753 2567888887643221112246778888776555543 233322 24899999886
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCC
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQ 198 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 198 (359)
++.. . + +... ... .. ......+.. .+...+..|.
T Consensus 86 ~L~~-------~-------~---~~~~--~~~-~~-~~~~~~~~~-----------------~l~~al~~lH-------- 119 (260)
T cd05070 86 SLLD-------F-------L---KDGE--GRA-LK-LPNLVDMAA-----------------QVAAGMAYIE-------- 119 (260)
T ss_pred cHHH-------H-------H---HhcC--CCC-CC-HHHHHHHHH-----------------HHHHHHHHHH--------
Confidence 5421 1 1 1110 000 00 111111111 1222222222
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 120 ~~~i~H~di~p~Nili~~~-~~~~l~dfg~~~~ 151 (260)
T cd05070 120 RMNYIHRDLRSANILVGDG-LVCKIADFGLARL 151 (260)
T ss_pred HCCcccCCCccceEEEeCC-ceEEeCCceeeee
Confidence 1258999999999999986 6788999998864
No 143
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.67 E-value=0.00018 Score=68.72 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=76.8
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
-++.|+.|....+|++.... .+..+.+|+..... ........|..+++.+....+ ++++....+ .+|
T Consensus 47 i~~~lG~G~fg~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-v~~~~~~~~~~~~~lv 121 (371)
T cd05622 47 VVKVIGRGAFGEVQLVRHKS----TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-VQLFYAFQDDRYLYMV 121 (371)
T ss_pred EEEEEeecCCeEEEEEEECC----CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-CeEEEEEEcCCEEEEE
Confidence 45667778889999998653 36788888864311 000011246666665543333 445544432 379
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..|.. . +.. ... +. .....+.. ++...+..|.
T Consensus 122 ~Ey~~gg~L~~-------~-------~~~---~~~-----~~--~~~~~~~~-----------------qi~~aL~~LH- 159 (371)
T cd05622 122 MEYMPGGDLVN-------L-------MSN---YDV-----PE--KWARFYTA-----------------EVVLALDAIH- 159 (371)
T ss_pred EcCCCCCcHHH-------H-------HHh---cCC-----CH--HHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999865531 1 111 011 10 11111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 160 -------~~~ivHrDLkp~NIll~~~-~~ikL~DfG~a~ 190 (371)
T cd05622 160 -------SMGFIHRDVKPDNMLLDKS-GHLKLADFGTCM 190 (371)
T ss_pred -------HCCEEeCCCCHHHEEECCC-CCEEEEeCCcee
Confidence 2379999999999999986 789999998764
No 144
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.67 E-value=0.00038 Score=65.20 Aligned_cols=137 Identities=13% Similarity=0.095 Sum_probs=78.9
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v 111 (359)
-.+.|+.|....+|++.... .++.+.+|+..... ...-....|..+++.+....+ .+++.... + .+|
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKG----TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI-VNMMCSFQDENRVYFL 96 (329)
T ss_pred EEEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-CcEEEEEEcCCEEEEE
Confidence 34667778889999998643 36789999875321 111112467777777754333 34444432 2 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..+. . .+.+-. .. + ......+.. ++...+..|.
T Consensus 97 ~e~~~~~~L~----------~----~l~~~~--~~-----~--~~~~~~~~~-----------------qi~~aL~~LH- 135 (329)
T PTZ00263 97 LEFVVGGELF----------T----HLRKAG--RF-----P--NDVAKFYHA-----------------ELVLAFEYLH- 135 (329)
T ss_pred EcCCCCChHH----------H----HHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 9999886542 1 111100 00 1 011111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 136 -------~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~~~ 166 (329)
T PTZ00263 136 -------SKDIIYRDLKPENLLLDNK-GHVKVTDFGFAK 166 (329)
T ss_pred -------HCCeeecCCCHHHEEECCC-CCEEEeeccCce
Confidence 1368999999999999986 789999999775
No 145
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.67 E-value=0.00016 Score=66.00 Aligned_cols=137 Identities=16% Similarity=0.237 Sum_probs=77.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--cccc-chHHHHHHHHHHhcCCCCceeEEEe-C-C--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVFF-DRNDEIRTFEFMSKHGQGPRLLGRF-H-N--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~-~-~--g~v~e 113 (359)
.+.++.|....+|++.... .+..+.+|+..... .... ....|..+++.+...++.+ ++... . + .+|+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e 80 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKE----TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVE-LKEAFRRRGKLYLVFE 80 (287)
T ss_pred EEEecccCCEEEEEEEECC----CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccc-hhhhEecCCEEEEEEe
Confidence 4567778889999998642 35778888875432 1111 1246777877776555443 22222 2 2 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|..+. . + +... .. .. ...+..+.. ++...+..|.
T Consensus 81 ~~~~~~l~-----------~----~---~~~~--~~--~~-~~~~~~~~~-----------------qi~~~L~~lH--- 117 (287)
T cd07848 81 YVEKNMLE-----------L----L---EEMP--NG--VP-PEKVRSYIY-----------------QLIKAIHWCH--- 117 (287)
T ss_pred cCCCCHHH-----------H----H---HhcC--CC--CC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 99874321 0 1 1100 00 00 111111111 1112222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 118 -----~~~i~H~dlkp~Nill~~~-~~~kl~Dfg~~~~ 149 (287)
T cd07848 118 -----KNDIVHRDIKPENLLISHN-DVLKLCDFGFARN 149 (287)
T ss_pred -----HCCeecCCCCHHHEEEcCC-CcEEEeeccCccc
Confidence 2268999999999999886 7899999998764
No 146
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.67 E-value=0.00037 Score=66.66 Aligned_cols=137 Identities=16% Similarity=0.206 Sum_probs=79.4
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
.++.|+.|....+|++.... .+..+.+|+..... ........|..+++.+.... .++++..+.+ .+|
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~-iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVD----TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW-VVRLYYSFQDKDNLYFV 79 (382)
T ss_pred EEEEEEeCCCEEEEEEEECC----CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCc-CCeEEEEEEeCCEEEEE
Confidence 56778888899999997542 35788888865321 11112245777777665433 3445544432 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|..+. . .+. .... .+ ...+..|..+ +...+..+.
T Consensus 80 ~E~~~gg~L~----------~----~l~---~~~~----~~--e~~~~~~~~q-----------------i~~al~~lH- 118 (382)
T cd05625 80 MDYIPGGDMM----------S----LLI---RMGI----FP--EDLARFYIAE-----------------LTCAVESVH- 118 (382)
T ss_pred EeCCCCCcHH----------H----HHH---hcCC----CC--HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 9999886442 1 111 1000 01 1112222211 112222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 119 -------~~~ivHrDlKp~NILl~~~-g~~kL~DFGla~ 149 (382)
T cd05625 119 -------KMGFIHRDIKPDNILIDRD-GHIKLTDFGLCT 149 (382)
T ss_pred -------hCCeecCCCCHHHEEECCC-CCEEEeECCCCc
Confidence 2268999999999999886 789999999764
No 147
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.67 E-value=0.00031 Score=65.54 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=76.0
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc----ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV----FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~----~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
+..|+.|....+|++.... .+..+.+|+....... ......|..++..+..+...++++..+. + .+|+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKG----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred EEEEeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4567778889999997642 3578889987543110 0011234455544444444455555443 2 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..+. . .+.+... . + ......+.. ++...+..|.
T Consensus 81 E~~~~g~L~----------~----~~~~~~~--~-----~--~~~~~~~~~-----------------qi~~aL~~LH-- 118 (323)
T cd05616 81 EYVNGGDLM----------Y----QIQQVGR--F-----K--EPHAVFYAA-----------------EIAIGLFFLH-- 118 (323)
T ss_pred cCCCCCCHH----------H----HHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999886542 1 1111000 0 0 011111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 119 ------~~~ivHrDlkp~Nill~~~-~~~kL~DfG~~~ 149 (323)
T cd05616 119 ------SKGIIYRDLKLDNVMLDSE-GHIKIADFGMCK 149 (323)
T ss_pred ------HCCEEecCCCHHHeEECCC-CcEEEccCCCce
Confidence 2369999999999999986 789999998765
No 148
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.67 E-value=0.00016 Score=65.55 Aligned_cols=136 Identities=13% Similarity=0.196 Sum_probs=77.5
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhc--CCCCceeEEEeCC----ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSK--HGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~--~gl~P~~~~~~~~----g~v~e 113 (359)
+.++.|....+|++.... .+..+++|....... ...+...|..+++.+.. +....+++....+ .+++|
T Consensus 7 ~~l~~g~~g~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVP----TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hheeccCCceEEEEEEcC----CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 456778888999987542 368899998754321 11123467777777763 2223344443322 37999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++. ..+.. + .. + ......+.. .+...+..+.
T Consensus 83 ~~~~~~L~--------------~~~~~-~--~l-----~--~~~~~~i~~-----------------~i~~~l~~lh--- 118 (277)
T cd06917 83 YAEGGSVR--------------TLMKA-G--PI-----A--EKYISVIIR-----------------EVLVALKYIH--- 118 (277)
T ss_pred cCCCCcHH--------------HHHHc-c--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 99886542 01110 0 11 0 111111111 1112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|+.|.||+++++ +.+.++||..+..
T Consensus 119 -----~~~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~ 150 (277)
T cd06917 119 -----KVGVIHRDIKAANILVTNT-GNVKLCDFGVAAL 150 (277)
T ss_pred -----hCCcccCCcCHHHEEEcCC-CCEEEccCCceee
Confidence 2368999999999999986 7899999986643
No 149
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.66 E-value=0.00032 Score=65.68 Aligned_cols=135 Identities=19% Similarity=0.234 Sum_probs=76.5
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccc-hHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFD-RNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
.|+.|....+|++.... .+..+.+|+..... ..... ...|..++..+..+...++++..+. + .+|+||
T Consensus 2 ~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 77 (329)
T cd05618 2 VIGRGSYAKVLLVRLKK----TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 77 (329)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeC
Confidence 46677889999997643 35788888875431 11111 2346666665555544555555443 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. . .+.+-+. . + ......+.. .+...+..|.
T Consensus 78 ~~~~~L~----------~----~~~~~~~--l-----~--~~~~~~i~~-----------------qi~~~l~~lH---- 113 (329)
T cd05618 78 VNGGDLM----------F----HMQRQRK--L-----P--EEHARFYSA-----------------EISLALNYLH---- 113 (329)
T ss_pred CCCCCHH----------H----HHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 0 1111000 0 1 111111111 1222223332
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 114 ----~~~ivH~Dikp~Nili~~~-~~~kL~DfG~~~ 144 (329)
T cd05618 114 ----ERGIIYRDLKLDNVLLDSE-GHIKLTDYGMCK 144 (329)
T ss_pred ----HCCeeeCCCCHHHEEECCC-CCEEEeeCCccc
Confidence 2268999999999999986 789999998764
No 150
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.65 E-value=0.00024 Score=63.65 Aligned_cols=136 Identities=21% Similarity=0.232 Sum_probs=75.9
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeecC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFINA 117 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~G 117 (359)
+.++.|....+|++... .+..+++|+.........+...|..+++.+...+ .++++..... ++|+||++|
T Consensus 10 ~~lg~G~~~~v~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 10 KELGSGQFGVVHLGKWR-----GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN-LVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred hhhccCCCceEEEeEec-----CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCC-EEEEEEEEcCCCceEEEEecCCC
Confidence 45677888899998753 2467899987543211111235777777665333 3345544432 389999988
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
..+.. . + +... .. .. ......+.. .+...+..+.
T Consensus 84 ~~L~~-------~-------l---~~~~--~~--~~-~~~~~~i~~-----------------qi~~~l~~lH------- 117 (256)
T cd05059 84 GCLLN-------Y-------L---RERK--GK--LG-TEWLLDMCS-----------------DVCEAMEYLE------- 117 (256)
T ss_pred CCHHH-------H-------H---Hhcc--cC--CC-HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 65421 0 1 1100 00 00 111111111 1112222222
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 118 -~~~i~H~dl~p~ni~i~~~-~~~kl~dfg~~~~ 149 (256)
T cd05059 118 -SNGFIHRDLAARNCLVGED-NVVKVSDFGLARY 149 (256)
T ss_pred -HCCcccccccHhhEEECCC-CcEEECCccccee
Confidence 1258999999999999886 7899999987653
No 151
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.65 E-value=0.00046 Score=62.80 Aligned_cols=132 Identities=13% Similarity=0.133 Sum_probs=74.9
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-c-ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-V-FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~ 114 (359)
++.++.|....+|++.... .+..+.+|+...... . ......|..+++.+....+ .+++..+ .+ .+++||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLL----TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYI-IGFYGAFFVENRISICTEF 80 (279)
T ss_pred eeeeccCCCeEEEEEEEcC----CCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCe-eeEEEEEEECCEEEEEEec
Confidence 3567778888999997542 367888998754311 1 0111246666665543333 3344332 22 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+... . .. + ...+..+. ..+...+..+.
T Consensus 81 ~~~~~l~~~------------------~--~~-----~--~~~~~~~~-----------------~qi~~~l~~lH---- 112 (279)
T cd06619 81 MDGGSLDVY------------------R--KI-----P--EHVLGRIA-----------------VAVVKGLTYLW---- 112 (279)
T ss_pred CCCCChHHh------------------h--cC-----C--HHHHHHHH-----------------HHHHHHHHHHH----
Confidence 998655210 0 00 0 00111111 11222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 113 ----~~~i~H~dlkp~Nill~~~-~~~~l~dfg~~~ 143 (279)
T cd06619 113 ----SLKILHRDVKPSNMLVNTR-GQVKLCDFGVST 143 (279)
T ss_pred ----HCCEeeCCCCHHHEEECCC-CCEEEeeCCcce
Confidence 2368999999999999986 789999998775
No 152
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.65 E-value=0.00039 Score=63.99 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=76.7
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEe-CC---ceEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRF-HN---GRVEEF 114 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~---g~v~e~ 114 (359)
-++.++.|..+.+|++.... .+..+.+|........ ......|..+++.+...++.+ ++..+ .+ .+|+||
T Consensus 24 ~~~~lg~g~~~~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~-~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 24 RFEKIGQGASGTVYTAMDVA----TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN-YLDSYLVGDELWVVMEY 98 (296)
T ss_pred eEEEecCCCCeEEEEEEECC----CCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEee-EEEEEEeCCEEEEeecc
Confidence 45667888889999986432 3678888876543211 111235677776665444433 33332 22 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. . + +.... . ...+..+.. .+...+..+.
T Consensus 99 ~~~~~L~~-------~-------~---~~~~~------~-~~~~~~i~~-----------------ql~~aL~~LH---- 133 (296)
T cd06654 99 LAGGSLTD-------V-------V---TETCM------D-EGQIAAVCR-----------------ECLQALEFLH---- 133 (296)
T ss_pred cCCCCHHH-------H-------H---HhcCC------C-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865431 1 1 11000 0 011111111 1112222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||+.+..
T Consensus 134 ----~~gi~H~dLkp~Nill~~~-~~~kl~dfg~~~~ 165 (296)
T cd06654 134 ----SNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQ 165 (296)
T ss_pred ----HCCcccCCCCHHHEEEcCC-CCEEECccccchh
Confidence 2258999999999999886 7899999997653
No 153
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.65 E-value=0.00046 Score=61.45 Aligned_cols=135 Identities=15% Similarity=0.150 Sum_probs=75.1
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeec
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFIN 116 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~ 116 (359)
.|+.|....+|++... ++..+++|+....... ......|..+++.+...++.+ ++.... + .+++||++
T Consensus 2 ~ig~g~~g~vy~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTLK-----DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVK-LIGVCTQRQPIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEec-----CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCe-EEEEEecCCccEEEEECCC
Confidence 3556777899998743 2578899987644211 112235777777765444433 443332 2 38999999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. . +. ..... .. ...+..+.. .+...+..+.
T Consensus 76 ~~~L~~----------~----~~---~~~~~----~~-~~~~~~~~~-----------------~i~~~l~~lH------ 110 (250)
T cd05085 76 GGDFLS----------F----LR---KKKDE----LK-TKQLVKFAL-----------------DAAAGMAYLE------ 110 (250)
T ss_pred CCcHHH----------H----HH---hcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865421 1 11 00000 00 111111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||..+..
T Consensus 111 --~~~~~H~dl~p~nili~~~-~~~~l~d~g~~~~ 142 (250)
T cd05085 111 --SKNCIHRDLAARNCLVGEN-NVLKISDFGMSRQ 142 (250)
T ss_pred --hCCeeecccChheEEEcCC-CeEEECCCcccee
Confidence 2368999999999999886 7889999997754
No 154
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.65 E-value=0.00072 Score=61.29 Aligned_cols=143 Identities=14% Similarity=0.174 Sum_probs=80.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC--C----ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N----GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~----g~v~e 113 (359)
+.++.|..+.+|++.........+..+++|+....... ..+...|...++.+....+ ++++.... + .+++|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i-~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI-VKYKGVCEKPGGRSLRLIME 88 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCCh-heEEeeeecCCCCceEEEEe
Confidence 56777888999999754221123578889988654321 1223467777766644333 34444332 1 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. . ++.... . .. ...+..+.. .+...+..|.
T Consensus 89 ~~~~~~l~~-------~----------l~~~~~---~-~~-~~~~~~~~~-----------------~l~~aL~~lH--- 126 (284)
T cd05038 89 YLPSGSLRD-------Y----------LQRHRD---Q-IN-LKRLLLFSS-----------------QICKGMDYLG--- 126 (284)
T ss_pred cCCCCCHHH-------H----------HHhCcc---c-cC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998765531 1 111000 0 00 111111111 1222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
...++|+|++|.||+++.+ +.+.|.||+.+..-.
T Consensus 127 -----~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~ 160 (284)
T cd05038 127 -----SQRYIHRDLAARNILVESE-DLVKISDFGLAKVLP 160 (284)
T ss_pred -----hCCeecCCCCHHhEEEcCC-CCEEEcccccccccc
Confidence 2368999999999999986 789999999887644
No 155
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.64 E-value=0.00017 Score=65.60 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=75.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-c-cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
++.++.|....+|.+.... .+..+++|+..... . .......|..++..+...+ .++++.... + .+++||
T Consensus 9 ~~~lg~g~~~~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNR----TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY-VTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhcccCCCeEEEEEEEcc----CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCC-EeeEEEEEEECCEEEEEEec
Confidence 4567777788999986532 35788899875331 1 1112235666666554333 344444432 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. . +. ..+. + ...+..+.. .+...+..+.
T Consensus 84 ~~~~~L~~-------~-------i~---~~~l-----~--~~~~~~~~~-----------------~l~~~l~~lh---- 118 (277)
T cd06640 84 LGGGSALD-------L-------LR---AGPF-----D--EFQIATMLK-----------------EILKGLDYLH---- 118 (277)
T ss_pred CCCCcHHH-------H-------Hh---cCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 99876521 1 11 1011 0 011111111 1112222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|+||+++++ +.+.++||..+.
T Consensus 119 ----~~~ivH~dl~p~Nil~~~~-~~~~l~dfg~~~ 149 (277)
T cd06640 119 ----SEKKIHRDIKAANVLLSEQ-GDVKLADFGVAG 149 (277)
T ss_pred ----hCCccCcCCChhhEEEcCC-CCEEEcccccce
Confidence 2368999999999999986 789999998764
No 156
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.64 E-value=0.00047 Score=63.08 Aligned_cols=137 Identities=16% Similarity=0.168 Sum_probs=77.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-cc-ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
.++.|+.|....+|++.... .+..+.+|+..... .. .....+|..+++.+...++ .+++.... + .+|+|
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKL----TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-VTLHDIIHTERCLTLVFE 83 (288)
T ss_pred EeeEEecCCCEEEEEEEECC----CCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCE-eeEEEEEcCCCeEEEEEe
Confidence 45778888889999997542 36788888775321 11 1122368888887754443 34444432 2 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++| .+. .. +.. +. . ......+..+.. ++...+..|.
T Consensus 84 ~~~~-~l~----------~~----l~~-~~-----~--~~~~~~~~~~~~-----------------qi~~aL~~LH--- 120 (288)
T cd07871 84 YLDS-DLK----------QY----LDN-CG-----N--LMSMHNVKIFMF-----------------QLLRGLSYCH--- 120 (288)
T ss_pred CCCc-CHH----------HH----HHh-cC-----C--CCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 9876 221 11 110 00 0 000111111111 1222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 121 -----~~~ivH~dlkp~Nil~~~~-~~~kl~DfG~~~ 151 (288)
T cd07871 121 -----KRKILHRDLKPQNLLINEK-GELKLADFGLAR 151 (288)
T ss_pred -----hCCcccCCCCHHHEEECCC-CCEEECcCccee
Confidence 2368999999999999886 789999998765
No 157
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.64 E-value=0.00029 Score=65.03 Aligned_cols=75 Identities=13% Similarity=0.040 Sum_probs=45.0
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcE--EEEEEeCCCc-ccc-cchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHK--VLLRVYGEGV-EVF-FDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~--~vlRi~~~~~-~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
+.|+.|....+|++.... .+.. +.++...... ... .....|..++..+.++...++++..+.. .+++|
T Consensus 13 ~~lg~G~~g~V~~a~~~~----~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 88 (303)
T cd05088 13 DVIGEGNFGQVLKARIKK----DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 88 (303)
T ss_pred eeecCCCCceEEEEEEcc----CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEE
Confidence 456778888999997542 1333 3444433221 111 1123578888888665556677766542 38999
Q ss_pred eecCCCC
Q 018207 114 FINARTL 120 (359)
Q Consensus 114 ~i~G~~l 120 (359)
|++|.++
T Consensus 89 ~~~~~~L 95 (303)
T cd05088 89 YAPHGNL 95 (303)
T ss_pred eCCCCcH
Confidence 9988654
No 158
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.64 E-value=0.00026 Score=63.09 Aligned_cols=149 Identities=19% Similarity=0.162 Sum_probs=79.7
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeec
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFIN 116 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~ 116 (359)
.|+.|....+|++...... ..+..+++|+....... ......|...++.+... -.++++..... .+++||.+
T Consensus 2 ~ig~g~~g~v~~~~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~-~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKD-GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHP-NVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred ccccCCceEEEEEEEecCC-CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCC-ChheeeeeecCCCceEEEEEecc
Confidence 3556677889998764310 12578888887654321 11224577777777633 33445544332 38999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. .+.............+........++. .+...+..|.
T Consensus 80 ~~~L~~--------------~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~l~~al~~lH------ 122 (262)
T cd00192 80 GGDLLD--------------YLRKSRPVFPSPEKSTLSLKDLLSFAI-----------------QIAKGMEYLA------ 122 (262)
T ss_pred CCcHHH--------------HHhhccccccccccccCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 876541 111110000000000000111111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
...++|+|++|.||+++++ +.+.++||..+....
T Consensus 123 --~~~i~H~di~p~nili~~~-~~~~l~dfg~~~~~~ 156 (262)
T cd00192 123 --SKKFVHRDLAARNCLVGED-LVVKISDFGLSRDVY 156 (262)
T ss_pred --cCCcccCccCcceEEECCC-CcEEEcccccccccc
Confidence 2478999999999999986 789999998877544
No 159
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.64 E-value=0.00073 Score=63.39 Aligned_cols=137 Identities=14% Similarity=0.173 Sum_probs=76.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cc-cchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VF-FDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~ 114 (359)
.+.|+.|....+|++.... .+..+.+|+...... .. ....+|.++++.+...++.+ ++..+ .+ .+|+||
T Consensus 10 ~~~lg~g~~g~V~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKP----SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG-FYGAFYSDGEISICMEH 84 (333)
T ss_pred eccccCCCCEEEEEEEECC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccc-eeEEEEECCEEEEEEec
Confidence 4567778888999987642 256777777543311 11 11246888888776544443 44333 22 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..|.. . +.+ +. .. + ...+..+.. .+...+..+..
T Consensus 85 ~~~~~L~~-------~-------l~~-~~-~~-----~--~~~~~~~~~-----------------~l~~~l~~lH~--- 121 (333)
T cd06650 85 MDGGSLDQ-------V-------LKK-AG-RI-----P--EQILGKVSI-----------------AVIKGLTYLRE--- 121 (333)
T ss_pred CCCCcHHH-------H-------HHH-cC-CC-----C--HHHHHHHHH-----------------HHHHHHHHHHh---
Confidence 99866531 1 110 00 00 0 111111111 11122222211
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 122 ----~~~ivH~dlkp~Nili~~~-~~~kL~Dfg~~~ 152 (333)
T cd06650 122 ----KHKIMHRDVKPSNILVNSR-GEIKLCDFGVSG 152 (333)
T ss_pred ----cCCEEecCCChhhEEEcCC-CCEEEeeCCcch
Confidence 1258999999999999886 779999998764
No 160
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.64 E-value=0.00066 Score=62.02 Aligned_cols=139 Identities=14% Similarity=0.166 Sum_probs=79.2
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc----cccc-hHHHHHHHHHHhcCCCCceeEEEeC-C---ceEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE----VFFD-RNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVE 112 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~----~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~ 112 (359)
+.++.|....+|.+...... ..+..+.+|+...... .... ...|..+++.+..+...++++..+. + .+|+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~-~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGH-DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeccCCcceEEEEEeccCC-CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 55777888899998753211 1367888998754311 0111 1357777877766555555655443 2 2899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|.++.. . +.+ . . +.....+..+.. .+.+.+..|.
T Consensus 85 e~~~~~~L~~-------~-------l~~--~--~-----~l~~~~~~~~~~-----------------qi~~al~~lH-- 122 (290)
T cd05613 85 DYINGGELFT-------H-------LSQ--R--E-----RFKEQEVQIYSG-----------------EIVLALEHLH-- 122 (290)
T ss_pred ecCCCCcHHH-------H-------HHH--c--C-----CCCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998865421 1 110 0 0 000111111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 123 ------~~~i~H~dl~p~nil~~~~-~~~kl~dfg~~~ 153 (290)
T cd05613 123 ------KLGIIYRDIKLENILLDSN-GHVVLTDFGLSK 153 (290)
T ss_pred ------hCCeeccCCCHHHeEECCC-CCEEEeeCccce
Confidence 2368999999999999986 789999998664
No 161
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.64 E-value=0.00026 Score=65.67 Aligned_cols=133 Identities=18% Similarity=0.151 Sum_probs=73.5
Q ss_pred cCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---cc-ccchHHHHHHHHHHhcCCCCceeEEEe-C-C--ceEEEeec
Q 018207 45 KGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EV-FFDRNDEIRTFEFMSKHGQGPRLLGRF-H-N--GRVEEFIN 116 (359)
Q Consensus 45 ~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~-~-~--g~v~e~i~ 116 (359)
+.|....+|++.... .+..+.+|+..... .. ......|..+++.+...++.+ ++... . + .+|+||++
T Consensus 2 g~G~~g~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~~ 76 (312)
T cd05585 2 GKGSFGKVMQVRKRD----TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP-LKFSFQSPEKLYLVLAFIN 76 (312)
T ss_pred CcCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEec-eeeEEecCCeEEEEEcCCC
Confidence 456678999997642 35778888765321 11 111235777777765444444 33332 2 2 38999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..|. . .+.+ + ... . ......+.. .+...+..|.
T Consensus 77 ~g~L~----------~----~l~~-~-~~~------~-~~~~~~~~~-----------------qi~~~l~~lH------ 110 (312)
T cd05585 77 GGELF----------H----HLQR-E-GRF------D-LSRARFYTA-----------------ELLCALENLH------ 110 (312)
T ss_pred CCcHH----------H----HHHh-c-CCC------C-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 86542 1 1111 0 000 0 111111111 1222222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 111 --~~~i~HrDlkp~Nili~~~-~~~kl~Dfg~~~~ 142 (312)
T cd05585 111 --KFNVIYRDLKPENILLDYQ-GHIALCDFGLCKL 142 (312)
T ss_pred --hCCeEeCCCCHHHeEECCC-CcEEEEECccccc
Confidence 2368999999999999886 7899999998764
No 162
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.63 E-value=0.00023 Score=66.97 Aligned_cols=137 Identities=16% Similarity=0.188 Sum_probs=78.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
.+.|+.|....+|++.... .++.+++|+..... ........|..++..+....+ ++++.... + .+|+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKD----TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI-VKLYYSFQDEEHLYLVM 80 (350)
T ss_pred EEEEEeCCcEEEEEEEECC----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCc-cchhhheecCCeEEEEE
Confidence 4667778889999998642 36889999875321 111112356666666653333 33443332 2 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|.++.. .+.+-+. . + ......+.. .+...+..|.
T Consensus 81 e~~~~~~L~~--------------~l~~~~~--l-----~--~~~~~~i~~-----------------qi~~aL~~LH-- 118 (350)
T cd05573 81 EYMPGGDLMN--------------LLIRKDV--F-----P--EETARFYIA-----------------ELVLALDSVH-- 118 (350)
T ss_pred cCCCCCCHHH--------------HHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998865421 1111000 0 0 011111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 119 ------~~giiH~Dlkp~NIll~~~-~~~kL~Dfg~~~~ 150 (350)
T cd05573 119 ------KLGFIHRDIKPDNILIDAD-GHIKLADFGLCKK 150 (350)
T ss_pred ------HCCeeccCCCHHHeEECCC-CCEEeecCCCCcc
Confidence 1479999999999999986 7899999998764
No 163
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.63 E-value=0.00063 Score=62.01 Aligned_cols=142 Identities=13% Similarity=0.157 Sum_probs=78.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cc-cchHHHHHHHHHHhcCCCCceeEEEe--C--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VF-FDRNDEIRTFEFMSKHGQGPRLLGRF--H--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~--g~v~ 112 (359)
++.++.|....+|++.........+..+++|....... .. ....+|..+++.+...++.+ ++... . . .+++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~~lv~ 87 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLIM 87 (284)
T ss_pred ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeee-eeeEEecCCCCceEEEE
Confidence 45677788889998864311112367888898754321 11 12246777777775544443 33222 2 1 2799
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|.+|.. . +. .... +..+.....+.. .+...+..+.
T Consensus 88 e~~~g~~L~~-------~-------l~---~~~~-----~~~~~~~~~i~~-----------------~i~~aL~~lH-- 126 (284)
T cd05079 88 EFLPSGSLKE-------Y-------LP---RNKN-----KINLKQQLKYAV-----------------QICKGMDYLG-- 126 (284)
T ss_pred EccCCCCHHH-------H-------HH---hccC-----CCCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9999876531 1 11 0000 000111111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|.||..+..
T Consensus 127 ------~~gi~H~dlkp~Nil~~~~-~~~~l~dfg~~~~ 158 (284)
T cd05079 127 ------SRQYVHRDLAARNVLVESE-HQVKIGDFGLTKA 158 (284)
T ss_pred ------HCCeeecccchheEEEcCC-CCEEECCCccccc
Confidence 2379999999999999886 7899999997763
No 164
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.63 E-value=0.00065 Score=62.80 Aligned_cols=139 Identities=17% Similarity=0.177 Sum_probs=77.1
Q ss_pred eEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-c-cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 39 LQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 39 ~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
..++.|+.|....+|++.... .+..+++|...... . ......+|..+++.+....+. +++.... + .+++
T Consensus 9 ~~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 9 IKLEKLGEGTYATVFKGRSKL----TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIVHTDKSLTLVF 83 (309)
T ss_pred EEEEEecccCCEEEEEEEecC----CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcc-eEEEEEeeCCeEEEEE
Confidence 345678888889999997542 25678888765332 1 111224677777777554443 3443332 2 3789
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||+++. + .. .+.+-+. ... ...+..+.. .+...+..|.
T Consensus 84 e~~~~~-l----------~~----~~~~~~~-------~~~-~~~~~~~~~-----------------qi~~aL~~lH-- 121 (309)
T cd07872 84 EYLDKD-L----------KQ----YMDDCGN-------IMS-MHNVKIFLY-----------------QILRGLAYCH-- 121 (309)
T ss_pred eCCCCC-H----------HH----HHHhcCC-------CCC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 998651 1 11 1111000 000 111111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 122 ------~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~ 153 (309)
T cd07872 122 ------RRKVLHRDLKPQNLLINER-GELKLADFGLARA 153 (309)
T ss_pred ------HCCeecCCCCHHHEEECCC-CCEEECcccccee
Confidence 2368999999999999986 7899999997753
No 165
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.62 E-value=0.0007 Score=61.61 Aligned_cols=142 Identities=12% Similarity=0.104 Sum_probs=79.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEe--CC----ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN----GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~----g~v~e 113 (359)
++.++.|..+.+|++.........+..+++|........ ......|.++++.+...++.+ ++... .+ .+++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~-~~~~~~~~~~~~~~lv~e 87 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLRLVME 87 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeE-EEEEEccCCCCceEEEEE
Confidence 456777888899998643211123678899987544322 112246888887776544433 33322 21 27999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.+|.. .+ +.... .........+.. .+...+..|.
T Consensus 88 ~~~~~~L~~-------~l----------~~~~~-----~l~~~~~~~~~~-----------------~l~~aL~~LH--- 125 (284)
T cd05081 88 YLPYGSLRD-------YL----------QKHRE-----RLDHRKLLLYAS-----------------QICKGMEYLG--- 125 (284)
T ss_pred ecCCCCHHH-------HH----------HhcCc-----CCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998876531 11 11000 000111111111 1222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 126 -----~~~i~H~dlkp~nili~~~-~~~~l~dfg~~~~ 157 (284)
T cd05081 126 -----SKRYVHRDLATRNILVESE-NRVKIGDFGLTKV 157 (284)
T ss_pred -----HCCceeccCCHhhEEECCC-CeEEECCCccccc
Confidence 2268999999999999886 7899999987764
No 166
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.62 E-value=0.00075 Score=60.32 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=77.9
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeecC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFINA 117 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~G 117 (359)
+.++.|....+|++... ++.+++|..............|..+++.+...++. +++.... + .+|+||.+|
T Consensus 12 ~~ig~g~~g~v~~~~~~------~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 12 ATIGKGEFGDVMLGDYR------GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLV-QLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred eeeecCCCceEEEEEec------CcEEEEEEeccchhHHHHHHHHHHHHHhcCCccee-eeEEEEcCCCCeEEEEEecCC
Confidence 55677778899998743 68889998764432111123577777777654443 3333332 2 389999987
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++.. .+..-.. . .........+..+ +...+..+.
T Consensus 85 ~~L~~--------------~~~~~~~------~-~~~~~~~~~~~~q-----------------i~~~l~~lh------- 119 (256)
T cd05039 85 GSLVD--------------YLRSRGR------A-VITLAQQLGFALD-----------------VCEGMEYLE------- 119 (256)
T ss_pred CcHHH--------------HHHhcCC------C-CCCHHHHHHHHHH-----------------HHHHHHHHH-------
Confidence 65421 1111000 0 0001111112111 111222221
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.||+++++ +.+.++||+.+...
T Consensus 120 -~~~i~H~di~p~Nili~~~-~~~~l~d~g~~~~~ 152 (256)
T cd05039 120 -EKNFVHRDLAARNVLVSED-LVAKVSDFGLAKEA 152 (256)
T ss_pred -hCCccchhcccceEEEeCC-CCEEEccccccccc
Confidence 2368999999999999986 78899999988764
No 167
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.61 E-value=0.00046 Score=65.53 Aligned_cols=143 Identities=16% Similarity=0.148 Sum_probs=86.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEeC--C---ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N---GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~---g~v~e~i 115 (359)
..|+.|....+|+-...+ +..+.||........ ..+...|..++..+....++ ++++++. + .+||||+
T Consensus 81 ~~ig~Ggfg~VYkG~l~~-----~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv-~LlGyC~e~~~~~~LVYEym 154 (361)
T KOG1187|consen 81 NLIGEGGFGTVYKGVLSD-----GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLV-KLLGYCLEGGEHRLLVYEYM 154 (361)
T ss_pred cceecCCCeEEEEEEECC-----CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcc-cEEEEEecCCceEEEEEEcc
Confidence 356667789999988752 467888865543322 22334788888777744444 4666552 2 3799999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+.-+|.. .||..... +. .|..+++-. -.+.+.+..|.
T Consensus 155 ~nGsL~d-----------------~L~~~~~~----~L------~W~~R~kIa-----------~g~A~gL~yLH----- 191 (361)
T KOG1187|consen 155 PNGSLED-----------------HLHGKKGE----PL------DWETRLKIA-----------LGAARGLAYLH----- 191 (361)
T ss_pred CCCCHHH-----------------HhCCCCCC----CC------CHHHHHHHH-----------HHHHHHHHHHc-----
Confidence 8545531 33432211 11 243333211 01222233332
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
...+..++|+|+++.|||+|++ -...+-||..|..++.
T Consensus 192 ~~~~~~iiHrDiKssNILLD~~-~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 192 EGCPPPIIHRDIKSSNILLDED-FNAKLSDFGLAKLGPE 229 (361)
T ss_pred cCCCCCEecCCCCHHHeeECCC-CCEEccCccCcccCCc
Confidence 2445589999999999999986 7788999999987775
No 168
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.61 E-value=0.00072 Score=60.63 Aligned_cols=142 Identities=19% Similarity=0.237 Sum_probs=79.2
Q ss_pred CCeE-EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceE
Q 018207 37 NSLQ-VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRV 111 (359)
Q Consensus 37 ~~~~-i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v 111 (359)
+.++ ++.++.|..+.+|++... .+..+++|..............|..+++.+...++.+ ++.... + .++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-----NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR-LYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-----CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCCcEEE
Confidence 3344 466777888899998753 2567888876543211112235777777776544443 333332 2 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|.++.. . +. ... ... .. ......|.. .+...+..|.
T Consensus 80 ~e~~~~~~L~~-------~-------l~---~~~--~~~-~~-~~~~~~~~~-----------------~l~~~l~~LH- 120 (261)
T cd05072 80 TEYMAKGSLLD-------F-------LK---SDE--GGK-VL-LPKLIDFSA-----------------QIAEGMAYIE- 120 (261)
T ss_pred EecCCCCcHHH-------H-------HH---Hhc--CCC-CC-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998865431 1 11 100 000 01 111111221 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 121 -------~~~i~H~dl~p~nili~~~-~~~~l~dfg~~~~ 152 (261)
T cd05072 121 -------RKNYIHRDLRAANVLVSES-LMCKIADFGLARV 152 (261)
T ss_pred -------HCCeeccccchhhEEecCC-CcEEECCCcccee
Confidence 1258999999999999986 7788999998764
No 169
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.61 E-value=0.00028 Score=63.62 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=74.5
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-cc-ccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~i 115 (359)
+.++.|....+|++..... +.....+.+|...... .. ......|..+++.+...++ .+++.... + .+++||+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~ 87 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLP-GKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-IHLEGVVTKSKPVMIVTEYM 87 (267)
T ss_pred eeecccCCCceEEEEEecC-CCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCccEEEEEcC
Confidence 5566677789999865321 1123467787764332 11 1122456677766654443 33444432 2 3799999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|..+.. . +. ... .. .. ...+..+.. .+...+..+.
T Consensus 88 ~~~~L~~-------~-------~~---~~~--~~--~~-~~~~~~i~~-----------------~i~~~l~~lH----- 123 (267)
T cd05066 88 ENGSLDA-------F-------LR---KHD--GQ--FT-VIQLVGMLR-----------------GIASGMKYLS----- 123 (267)
T ss_pred CCCCHHH-------H-------HH---hcC--CC--CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 9875431 1 11 000 00 01 111111111 1222222222
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 124 ---~~~i~h~dlkp~nili~~~-~~~~l~dfg~~~~ 155 (267)
T cd05066 124 ---DMGYVHRDLAARNILVNSN-LVCKVSDFGLSRV 155 (267)
T ss_pred ---HCCEeehhhchhcEEECCC-CeEEeCCCCcccc
Confidence 2368999999999999886 6789999987653
No 170
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.60 E-value=0.00093 Score=59.35 Aligned_cols=138 Identities=14% Similarity=0.137 Sum_probs=78.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e 113 (359)
.+.++.|....+|++.... .+..+++|....... .......|.+++..+...++. +++... .+ .++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLE----TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIV-KYIGSIETSDSLYIILE 79 (254)
T ss_pred eeEEcccCCeEEEEEEEcC----CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCcc-EEEEEEEeCCEEEEEEe
Confidence 3667788889999987542 367899998865431 111124577777766544443 343332 22 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++. ..+.+-+. . + ......+.. .+...+.. +
T Consensus 80 ~~~~~~L~--------------~~~~~~~~--l-----~--~~~~~~~~~-----------------~i~~~l~~----l 115 (254)
T cd06627 80 YAENGSLR--------------QIIKKFGP--F-----P--ESLVAVYVY-----------------QVLQGLAY----L 115 (254)
T ss_pred cCCCCcHH--------------HHHHhccC--C-----C--HHHHHHHHH-----------------HHHHHHHH----H
Confidence 99886542 11111110 0 0 111111111 11111111 2
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
....++|+|++|.||+++++ +.+.|.||+.+..-
T Consensus 116 ----H~~~i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~ 149 (254)
T cd06627 116 ----HEQGVIHRDIKAANILTTKD-GVVKLADFGVATKL 149 (254)
T ss_pred ----hhCCcccCCCCHHHEEECCC-CCEEEeccccceec
Confidence 12367999999999999985 78999999987643
No 171
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.60 E-value=0.00063 Score=62.24 Aligned_cols=137 Identities=15% Similarity=0.184 Sum_probs=78.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
.+.|+.|....+|++.... .+..+++|+..... ........|.++++.+.. .-.++++....+ .+|+
T Consensus 6 ~~~ig~g~~~~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKG----SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH-PFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred EEEeecCCCeEEEEEEEcC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCccceeeEEEcCCeEEEEE
Confidence 4567777788999997643 36889999875321 011112357777777763 334455554432 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|.++.. .+.+-. .. + ......+.. .+.+.+..+.
T Consensus 81 e~~~~~~L~~--------------~~~~~~--~l-----~--~~~~~~~~~-----------------qil~~l~~lH-- 118 (290)
T cd05580 81 EYVPGGELFS--------------HLRKSG--RF-----P--EPVARFYAA-----------------QVVLALEYLH-- 118 (290)
T ss_pred ecCCCCCHHH--------------HHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998865421 111100 00 0 111111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||+.+..
T Consensus 119 ------~~~i~H~dl~p~nili~~~-~~~kl~dfg~~~~ 150 (290)
T cd05580 119 ------SLDIVYRDLKPENLLLDSD-GYIKITDFGFAKR 150 (290)
T ss_pred ------HCCEecCCCCHHHEEECCC-CCEEEeeCCCccc
Confidence 2368999999999999986 7899999987764
No 172
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.60 E-value=0.0015 Score=68.62 Aligned_cols=146 Identities=16% Similarity=0.166 Sum_probs=79.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cccc-hHHHHHHHHHHhcCCCCceeEEEeC-C---ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VFFD-RNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~ 112 (359)
.+.|+.|....+|++.... .++.+++|+...... ...+ ..+|..++..+...++.+ ++.... + .++|
T Consensus 7 i~~LGkGgfG~VYlA~d~~----tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVk-l~~v~~d~~~lyLVM 81 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPV----CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVP-VYSICSDGDPVYYTM 81 (932)
T ss_pred EEEEecCCCEEEEEEEECC----CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCe-EEEEEeeCCEEEEEE
Confidence 4667778889999997542 367889998754311 1111 135777777766545444 444332 2 3799
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccC-CCCCC-CcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDL-DMPGQ-KIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
+|++|.++.. . +...... ..+.. ..+.....+..+. ..+.+.+..+.
T Consensus 82 EY~eGGSL~~-------l-------L~s~~~~~~l~e~~~~~lsv~~iL~I~-----------------~QIa~AL~yLH 130 (932)
T PRK13184 82 PYIEGYTLKS-------L-------LKSVWQKESLSKELAEKTSVGAFLSIF-----------------HKICATIEYVH 130 (932)
T ss_pred EcCCCCCHHH-------H-------HHHhhhccccchhhhcccCHHHHHHHH-----------------HHHHHHHHHHH
Confidence 9999876531 1 1111110 00000 0000000000000 11112222222
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||..+..
T Consensus 131 --------s~GIIHRDLKPeNILLd~d-g~vKLiDFGLAk~ 162 (932)
T PRK13184 131 --------SKGVLHRDLKPDNILLGLF-GEVVILDWGAAIF 162 (932)
T ss_pred --------HCCccccCCchheEEEcCC-CCEEEEecCccee
Confidence 2368999999999999986 7899999998764
No 173
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.60 E-value=0.00068 Score=62.50 Aligned_cols=137 Identities=17% Similarity=0.176 Sum_probs=77.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
-++.|+.|....+|++.... .+..+++|+...... ......+|..+++.+....+. +++.... + .+|+|
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKV----NGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIV-LLHDIIHTKETLTLVFE 83 (303)
T ss_pred EeeeEEecCCEEEEEEEECC----CCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcC-eEEEEEecCCeEEEEEE
Confidence 35677888889999998642 367889998754321 111224688888777654443 3443332 2 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.- ... +.+ |.... + ...+..+.. ++...+..+.
T Consensus 84 ~~~~~l-----------~~~----~~~-~~~~~-----~--~~~~~~~~~-----------------qi~~al~~lH--- 120 (303)
T cd07869 84 YVHTDL-----------CQY----MDK-HPGGL-----H--PENVKLFLF-----------------QLLRGLSYIH--- 120 (303)
T ss_pred CCCcCH-----------HHH----HHh-CCCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 987621 111 110 11000 0 111111111 1122222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 121 -----~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 151 (303)
T cd07869 121 -----QRYILHRDLKPQNLLISDT-GELKLADFGLAR 151 (303)
T ss_pred -----HCCeecCCCCHHHEEECCC-CCEEECCCCcce
Confidence 1368999999999999886 789999999764
No 174
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.59 E-value=0.00041 Score=64.58 Aligned_cols=135 Identities=18% Similarity=0.191 Sum_probs=76.5
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
.|+.|....+|++.... .+..+++|+..... ........|..++..+..+...++++..+. + .+|+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey 77 (316)
T cd05619 2 MLGKGSFGKVFLAELKG----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEY 77 (316)
T ss_pred eeeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeC
Confidence 36667788999998643 35788899875431 111112345566655445545556665543 2 289999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.+|. ..+.+-+.. + ......+.. ++...+..|.
T Consensus 78 ~~~g~L~--------------~~l~~~~~~-------~--~~~~~~~~~-----------------qi~~al~~LH---- 113 (316)
T cd05619 78 LNGGDLM--------------FHIQSCHKF-------D--LPRATFYAA-----------------EIICGLQFLH---- 113 (316)
T ss_pred CCCCcHH--------------HHHHHcCCC-------C--HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 111111110 0 011111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 114 ----~~~ivHrdikp~Nil~~~~-~~~kl~Dfg~~~ 144 (316)
T cd05619 114 ----SKGIVYRDLKLDNILLDTD-GHIKIADFGMCK 144 (316)
T ss_pred ----hCCeEeCCCCHHHEEECCC-CCEEEccCCcce
Confidence 2368999999999999986 789999998664
No 175
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.59 E-value=0.00043 Score=64.59 Aligned_cols=138 Identities=17% Similarity=0.193 Sum_probs=76.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-----ccccchHHHHHHHHHHhcCCCCceeEEEe-CC---ceEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-----EVFFDRNDEIRTFEFMSKHGQGPRLLGRF-HN---GRVE 112 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~---g~v~ 112 (359)
+.|+.|....+|++...... ..+..+.+|+..... ........|..+++.+...++.+ ++..+ .+ .+|+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~-~~~~~~~~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGA-DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVD-LIYAFQTGGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccC-CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhc-eeeEEecCCeEEEEE
Confidence 45777888899999753211 136788899875321 01111235778888776544444 33333 22 3799
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..+. . .+. ... +........++. ++...+..|.
T Consensus 80 e~~~~~~L~----------~----~~~---~~~------~~~~~~~~~~~~-----------------qi~~~l~~lH-- 117 (323)
T cd05584 80 EYLSGGELF----------M----HLE---REG------IFMEDTACFYLS-----------------EISLALEHLH-- 117 (323)
T ss_pred eCCCCchHH----------H----HHH---HcC------CCCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999876542 1 111 100 000111111111 1222223332
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 118 ------~~~ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~ 148 (323)
T cd05584 118 ------QQGIIYRDLKPENILLDAQ-GHVKLTDFGLCK 148 (323)
T ss_pred ------HCCeecCCCCHHHeEECCC-CCEEEeeCcCCe
Confidence 2368999999999999886 789999998754
No 176
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.59 E-value=0.00097 Score=59.85 Aligned_cols=139 Identities=17% Similarity=0.168 Sum_probs=77.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC--ceEEEeecC
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN--GRVEEFINA 117 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~--g~v~e~i~G 117 (359)
-.+.++.|..+.+|++... .+..+++|..............|..+++.+...++.+-....... .+++||++|
T Consensus 10 ~~~~lg~g~~~~vy~~~~~-----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05073 10 LEKKLGAGQFGEVWMATYN-----KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK 84 (260)
T ss_pred EEeEecCccceEEEEEEec-----CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCC
Confidence 3466777888899999743 246788887754322111223578888877655554432222222 388999987
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++.. . +. ... ... .. ......+.. .+...+..+.
T Consensus 85 ~~L~~-------~-------~~---~~~--~~~-~~-~~~~~~~~~-----------------~l~~aL~~lH------- 119 (260)
T cd05073 85 GSLLD-------F-------LK---SDE--GSK-QP-LPKLIDFSA-----------------QIAEGMAFIE------- 119 (260)
T ss_pred CcHHH-------H-------HH---hCC--ccc-cC-HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 65421 1 11 000 000 01 111111211 1222222221
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||+.+.
T Consensus 120 -~~~i~H~dl~p~ni~i~~~-~~~~l~d~~~~~ 150 (260)
T cd05073 120 -QRNYIHRDLRAANILVSAS-LVCKIADFGLAR 150 (260)
T ss_pred -hCCccccccCcceEEEcCC-CcEEECCCccee
Confidence 2258999999999999886 788899998764
No 177
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.58 E-value=0.00012 Score=65.53 Aligned_cols=138 Identities=14% Similarity=0.162 Sum_probs=78.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
.+.++.|....+|++.... .+..+++|+..... ...-....|.++++.+...++.+ ++.... + .+|+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~ 79 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRD----TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVN-LWYSFQDEENMYLVV 79 (258)
T ss_pred EEEeccCCCceEEEEEEcc----CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHH-HHHhhcCCCeEEEEE
Confidence 4667778888999997542 36889999875431 11112245777777665444333 332222 2 3789
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
+|++|.++.. . +.+-+ +. + ...+..+.. .+.+.+..|.
T Consensus 80 e~~~~~~L~~----------~----l~~~~--~l-----~--~~~~~~~~~-----------------~i~~~l~~lh-- 117 (258)
T cd05578 80 DLLLGGDLRY----------H----LSQKV--KF-----S--EEQVKFWIC-----------------EIVLALEYLH-- 117 (258)
T ss_pred eCCCCCCHHH----------H----HHhcC--Cc-----C--HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998876531 1 11100 00 0 111222221 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.||+++++ +.+.++||+.+...
T Consensus 118 ------~~~i~h~dl~~~nil~~~~-~~~~l~d~~~~~~~ 150 (258)
T cd05578 118 ------SKGIIHRDIKPDNILLDEQ-GHVHITDFNIATKV 150 (258)
T ss_pred ------hCCeeccCCCHHHeEEcCC-CCEEEeeccccccc
Confidence 2258999999999999986 78999999977653
No 178
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.58 E-value=0.00035 Score=63.49 Aligned_cols=139 Identities=19% Similarity=0.138 Sum_probs=76.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccc-cchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVF-FDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
++.|+.|....+|++.... .+..+++|...... ... .....|..+++.+.. .-.++++.... + .+|++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKK----TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH-PNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred eeEecccCceEEEEEEECC----CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC-CCEeeeEEEEeeCCeEEEEEe
Confidence 4567778889999997542 36788998865321 111 112467777777753 22344554432 2 37889
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++| .+. ..+ +.... .. ......+..+.. ++.+.+..|.
T Consensus 80 ~~~~-~l~--------------~~~---~~~~~-~~--~~~~~~~~~~~~-----------------qi~~~L~~lH--- 118 (285)
T cd07861 80 FLSM-DLK--------------KYL---DSLPK-GQ--YMDAELVKSYLY-----------------QILQGILFCH--- 118 (285)
T ss_pred cCCC-CHH--------------HHH---hcCCC-CC--cCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 8875 211 111 11110 00 000111111111 1222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|.||..+..
T Consensus 119 -----~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~ 150 (285)
T cd07861 119 -----SRRVLHRDLKPQNLLIDNK-GVIKLADFGLARA 150 (285)
T ss_pred -----hCCeeecCCCHHHEEEcCC-CcEEECcccceee
Confidence 2368999999999999886 7899999997753
No 179
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.58 E-value=0.0017 Score=62.42 Aligned_cols=131 Identities=14% Similarity=0.095 Sum_probs=74.8
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEee
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFI 115 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i 115 (359)
-++.|+.|....+|++.... .++.+++|..... . ..+|..+++.|....+.. ++..+. + .++++++
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~----~~~~vaiK~~~~~--~---~~~E~~il~~l~HpnIv~-~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNK----TCEHVVIKAGQRG--G---TATEAHILRAINHPSIIQ-LKGTFTYNKFTCLILPRY 165 (391)
T ss_pred EEEEEcCCCCeEEEEEEECC----CCCEEEEechhhh--h---hHHHHHHHHhCCCCCCCC-EeEEEEECCeeEEEEecC
Confidence 45677888899999997542 3678888864321 1 247899998887555443 443332 2 2667776
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
.|. +... +..-+. . + ...+..+.. .+...+..+.
T Consensus 166 ~~~-----------L~~~----l~~~~~--l-----~--~~~~~~i~~-----------------qi~~aL~ylH----- 199 (391)
T PHA03212 166 KTD-----------LYCY----LAAKRN--I-----A--ICDILAIER-----------------SVLRAIQYLH----- 199 (391)
T ss_pred CCC-----------HHHH----HHhcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 431 1111 111000 0 0 111111111 1112222222
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 200 ---~~~IvHrDiKP~NIll~~~-~~vkL~DFG~a~ 230 (391)
T PHA03212 200 ---ENRIIHRDIKAENIFINHP-GDVCLGDFGAAC 230 (391)
T ss_pred ---hCCcccCCCChHhEEEcCC-CCEEEEeCCccc
Confidence 2268999999999999886 789999999875
No 180
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.58 E-value=0.00073 Score=63.31 Aligned_cols=30 Identities=23% Similarity=0.479 Sum_probs=26.1
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 121 ~~iiHrDlkp~Nill~~~-~~~kl~DfG~a~ 150 (331)
T cd05624 121 LHYVHRDIKPDNVLLDMN-GHIRLADFGSCL 150 (331)
T ss_pred CCeeeccCchHHEEEcCC-CCEEEEecccee
Confidence 368999999999999886 789999998763
No 181
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.57 E-value=0.0011 Score=59.21 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=76.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe-CC---ceEEEeec
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF-HN---GRVEEFIN 116 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~---g~v~e~i~ 116 (359)
.+.++.|....+|++... +..+++|....... ......|..+++.+...++.+-.-... .+ .+++||++
T Consensus 11 ~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYR------GNKVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred eeeecccCCCeEEEEEEc------CCcEEEEEeCCCch-HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 355666777899998653 57888898754321 112246778887776544444332222 22 37999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. . +. ..... .........+.. .+...+..+.
T Consensus 84 ~~~L~~-------~-------~~---~~~~~----~~~~~~~~~~~~-----------------~i~~~l~~lH------ 119 (256)
T cd05082 84 KGSLVD-------Y-------LR---SRGRS----VLGGDCLLKFSL-----------------DVCEAMEYLE------ 119 (256)
T ss_pred CCcHHH-------H-------HH---hcCCC----CCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865431 1 11 10000 000111111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 120 --~~~i~H~dlkp~nil~~~~-~~~kl~dfg~~~~ 151 (256)
T cd05082 120 --ANNFVHRDLAARNVLVSED-NVAKVSDFGLTKE 151 (256)
T ss_pred --hCCEeccccchheEEEcCC-CcEEecCCcccee
Confidence 2368999999999999986 7899999987664
No 182
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.55 E-value=0.0015 Score=58.27 Aligned_cols=139 Identities=14% Similarity=0.145 Sum_probs=78.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-c-cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
.+.++.|....+|++.... .+..+++|.+.... . ...+...|..+++.+...++ ++++..+. + .++++|
T Consensus 5 ~~~lg~g~~g~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVN----SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI-VAFKESFEADGHLYIVMEY 79 (255)
T ss_pred EEEeeccCCeEEEEEEEcC----CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEECCEEEEEEee
Confidence 3567778888999997642 36889999875322 1 11122457777776654444 33443332 2 378999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..+. . .+........ + ...+..|..+ +...+..+.
T Consensus 80 ~~~~~l~----------~----~~~~~~~~~~-----~--~~~~~~~~~~-----------------i~~al~~lH---- 117 (255)
T cd08219 80 CDGGDLM----------Q----KIKLQRGKLF-----P--EDTILQWFVQ-----------------MCLGVQHIH---- 117 (255)
T ss_pred CCCCcHH----------H----HHHhccCCCC-----C--HHHHHHHHHH-----------------HHHHHHHHh----
Confidence 9875432 1 1111000000 0 1112222211 112222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 118 ----~~~i~H~dl~p~nili~~~-~~~~l~dfg~~~~ 149 (255)
T cd08219 118 ----EKRVLHRDIKSKNIFLTQN-GKVKLGDFGSARL 149 (255)
T ss_pred ----hCCcccCCCCcceEEECCC-CcEEEcccCccee
Confidence 2378999999999999886 7899999997753
No 183
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.55 E-value=0.0012 Score=61.12 Aligned_cols=137 Identities=13% Similarity=0.134 Sum_probs=76.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cc-cchHHHHHHHHHHhcCCCCceeEEEe-C-C--ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VF-FDRNDEIRTFEFMSKHGQGPRLLGRF-H-N--GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~l~~l~~~gl~P~~~~~~-~-~--g~v~e~ 114 (359)
.+.|+.|....+|++.... .+..+++|+...... .. .....|.++++.+...++. +++..+ . + .+++||
T Consensus 6 ~~~lg~G~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRP----SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIV-GFYGAFYSDGEISICMEH 80 (308)
T ss_pred EeeccCCCCeEEEEEEEcC----CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCC-eEEEEEeeCCEEEEEeec
Confidence 3556777778999987542 256777777654321 11 1123577777777544443 344333 2 2 289999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|..|.. . +.+-+ .. + ......+.. .+.+.+..|.+
T Consensus 81 ~~~~~L~~-------~-------l~~~~--~~-----~--~~~~~~~~~-----------------~i~~~l~~lH~--- 117 (308)
T cd06615 81 MDGGSLDQ-------V-------LKKAG--RI-----P--ENILGKISI-----------------AVLRGLTYLRE--- 117 (308)
T ss_pred cCCCcHHH-------H-------HHhcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHHh---
Confidence 99876531 1 11100 00 1 111111111 11122222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 118 ----~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 148 (308)
T cd06615 118 ----KHKIMHRDVKPSNILVNSR-GEIKLCDFGVSG 148 (308)
T ss_pred ----hCCEEECCCChHHEEEecC-CcEEEccCCCcc
Confidence 1258999999999999986 778999998765
No 184
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.54 E-value=0.00055 Score=62.38 Aligned_cols=29 Identities=28% Similarity=0.338 Sum_probs=25.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 117 ~ivH~dikp~Nil~~~~-~~~~l~dfg~~~ 145 (279)
T cd05633 117 FVVYRDLKPANILLDEH-GHVRISDLGLAC 145 (279)
T ss_pred CcCCCCCCHHHEEECCC-CCEEEccCCcce
Confidence 58999999999999886 789999999774
No 185
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.54 E-value=0.00069 Score=60.78 Aligned_cols=139 Identities=17% Similarity=0.201 Sum_probs=78.9
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC---ceEEEeecC
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN---GRVEEFINA 117 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~---g~v~e~i~G 117 (359)
++.|+.|....+|++... .+..+.+|..........+...|..+++.+....+. +++..... .++++|++|
T Consensus 11 ~~~ig~G~~g~v~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYN-----GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLV-RLYAVVTQEPIYIITEYMEN 84 (260)
T ss_pred eeeeccCccceEEeeecC-----CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCee-eEEEEEccCCcEEEEEcCCC
Confidence 456777888899999753 267899998764332222334688888877644433 33443322 378999887
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++.. . + +... ... .. ......+.. .+...++.|
T Consensus 85 ~~L~~-------~-------~---~~~~--~~~-~~-~~~~~~i~~-----------------~i~~al~~L-------- 118 (260)
T cd05067 85 GSLVD-------F-------L---KTPE--GIK-LT-INKLIDMAA-----------------QIAEGMAFI-------- 118 (260)
T ss_pred CCHHH-------H-------H---HhcC--CCC-CC-HHHHHHHHH-----------------HHHHHHHHH--------
Confidence 65421 1 1 1100 000 00 111111111 111122222
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
....++|+|++|.||+++++ +.+.++||..+...
T Consensus 119 H~~~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~ 152 (260)
T cd05067 119 ERKNYIHRDLRAANILVSET-LCCKIADFGLARLI 152 (260)
T ss_pred hcCCeecccccHHhEEEcCC-CCEEEccCcceeec
Confidence 12368999999999999986 78999999887543
No 186
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.54 E-value=0.0019 Score=57.75 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=79.4
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i 115 (359)
.+.++.|....+|++.... .+..+++|+....... ......|..+++.+...++.+ +++... + .+++||+
T Consensus 8 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIA----TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA-YFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred EEEecCCCceEEEEeEecC----CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhc-eEEEEEeCCEEEEEEeCC
Confidence 4667788888999997542 2578999988654221 112245777777665545544 443332 2 3789999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|..+.. .+.. +.... . ...+..+.. .+...+..|.
T Consensus 83 ~~~~l~~-------~~~~--------~~~~l------~-~~~~~~~~~-----------------ql~~~l~~lh----- 118 (262)
T cd06613 83 GGGSLQD-------IYQV--------TRGPL------S-ELQIAYVCR-----------------ETLKGLAYLH----- 118 (262)
T ss_pred CCCcHHH-------HHHh--------hccCC------C-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 9876531 1110 00000 0 111111111 1112222221
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|.||..+..
T Consensus 119 ---~~~i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~ 150 (262)
T cd06613 119 ---ETGKIHRDIKGANILLTED-GDVKLADFGVSAQ 150 (262)
T ss_pred ---hCCceecCCChhhEEECCC-CCEEECccccchh
Confidence 2368999999999999986 7899999987754
No 187
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.53 E-value=0.001 Score=61.19 Aligned_cols=137 Identities=16% Similarity=0.170 Sum_probs=76.8
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
.++.|+.|....+|++.... .+..+++|....... .......|..+++.+...++. +++.... + .+|+|
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~-~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 10 KLDKLGEGTYATVYKGRSKL----TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIIHTEKSLTLVFE 84 (301)
T ss_pred EeeEeccCcCEEEEEEEEcC----CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcc-eEEEEEecCCeEEEEEe
Confidence 45677888889999997542 357788887653321 111224678888777654443 3444332 2 27889
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++| .+. . .+ +..... .. ...+..+.. .+.+.+..|.
T Consensus 85 ~~~~-~l~----------~----~l---~~~~~~----~~-~~~~~~~~~-----------------qi~~aL~~lH--- 121 (301)
T cd07873 85 YLDK-DLK----------Q----YL---DDCGNS----IN-MHNVKLFLF-----------------QLLRGLNYCH--- 121 (301)
T ss_pred cccc-CHH----------H----HH---HhcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 8875 110 1 11 111000 00 111111111 1122222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|+||+++++ +.+.++||..+.
T Consensus 122 -----~~~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~ 152 (301)
T cd07873 122 -----RRKVLHRDLKPQNLLINER-GELKLADFGLAR 152 (301)
T ss_pred -----hCCeeCCCCCHHHEEECCC-CcEEECcCcchh
Confidence 2368999999999999986 789999998775
No 188
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.53 E-value=0.00058 Score=62.01 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=74.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-ccc-cchHHHHHHHHHHhcCCCCceeEEEe-CC---ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EVF-FDRNDEIRTFEFMSKHGQGPRLLGRF-HN---GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~-~~---g~v~e~ 114 (359)
++.|+.|....+|++.... .+..+.+|+..... ... .+...|..++..+...++. +++... .+ .+|+||
T Consensus 9 ~~~ig~G~~~~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNR----TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT-KYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred heeEeecCCeEEEEEEECC----CCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEe-EEEEEEEeCCeEEEEEEe
Confidence 4567778888999986432 25788899875322 111 1123455666555433333 343333 22 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. .+ +... .. ......+.. .+...+..+
T Consensus 84 ~~~~~l~~-------~i----------~~~~------~~-~~~~~~~~~-----------------~l~~~l~~l----- 117 (277)
T cd06641 84 LGGGSALD-------LL----------EPGP------LD-ETQIATILR-----------------EILKGLDYL----- 117 (277)
T ss_pred CCCCcHHH-------HH----------hcCC------CC-HHHHHHHHH-----------------HHHHHHHHH-----
Confidence 98865421 11 1100 00 111111111 111112211
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
....++|+|++|+||+++++ +.+.++||+.+..
T Consensus 118 ---h~~~i~h~dl~p~Ni~i~~~-~~~~l~dfg~~~~ 150 (277)
T cd06641 118 ---HSEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQ 150 (277)
T ss_pred ---ccCCeecCCCCHHhEEECCC-CCEEEeeccccee
Confidence 23478999999999999886 7899999987653
No 189
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.53 E-value=0.00051 Score=62.38 Aligned_cols=30 Identities=20% Similarity=0.462 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 129 ~iiH~dlkp~Nil~~~~-~~~kL~dfG~~~~ 158 (279)
T cd05109 129 RLVHRDLAARNVLVKSP-NHVKITDFGLARL 158 (279)
T ss_pred CeeccccccceEEEcCC-CcEEECCCCceee
Confidence 68999999999999876 6799999987754
No 190
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.52 E-value=0.00042 Score=61.98 Aligned_cols=136 Identities=20% Similarity=0.198 Sum_probs=76.2
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe-CC--ceEEEeecCC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF-HN--GRVEEFINAR 118 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~--g~v~e~i~G~ 118 (359)
+.++.|..+.+|.... .+..+++|........ .....|..+++.+...++.+ ++... .+ .+++||++|.
T Consensus 12 ~~lg~g~~g~v~~~~~------~~~~~~iK~~~~~~~~-~~~~~e~~~l~~~~~~~i~~-~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 12 EIIGEGEFGAVLQGEY------TGQKVAVKNIKCDVTA-QAFLEETAVMTKLHHKNLVR-LLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred eeeccCCCCceEeccc------CCCceEEEeecCcchH-HHHHHHHHHHHhCCCCCcCe-EEEEEcCCCcEEEEECCCCC
Confidence 4566677788898753 2578889887543211 11235777777776555544 33332 23 3789999886
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCC
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQ 198 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 198 (359)
++.. . +.. +. ... .. ......+.. .+.+.+..+.
T Consensus 84 ~L~~-------~-------l~~-~~----~~~-~~-~~~~~~~~~-----------------qi~~al~~lH-------- 117 (254)
T cd05083 84 NLVN-------F-------LRT-RG----RAL-VS-VIQLLQFSL-----------------DVAEGMEYLE-------- 117 (254)
T ss_pred CHHH-------H-------HHh-cC----cCC-CC-HHHHHHHHH-----------------HHHHHHHHHH--------
Confidence 5531 1 111 00 000 00 111111111 1112222222
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|+||+++.+ +.+.|+||+.+...
T Consensus 118 ~~~~~H~dl~p~nili~~~-~~~kl~Dfg~~~~~ 150 (254)
T cd05083 118 SKKLVHRDLAARNILVSED-GVAKVSDFGLARVG 150 (254)
T ss_pred hCCeeccccCcceEEEcCC-CcEEECCCccceec
Confidence 2378999999999999886 78999999977654
No 191
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.52 E-value=0.00095 Score=61.58 Aligned_cols=137 Identities=15% Similarity=0.227 Sum_probs=77.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc----ccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV----FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~----~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~ 112 (359)
++.++.|....+|++.... .+..+++|........ ......|..+++.+...++ ++++.... + .+++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKE----TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV-VSMFCSFETKRHLCMVM 80 (305)
T ss_pred eeEeecCCCeeEEEEEECC----CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEecCCEEEEEE
Confidence 4667778888999987642 3578999987543211 0111256666665544333 45555443 2 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..+. ..+..-+ .. + ......+..+ +...+..+.
T Consensus 81 e~~~g~~L~--------------~~l~~~~--~~-----~--~~~~~~~~~~-----------------i~~~l~~lH-- 118 (305)
T cd05609 81 EYVEGGDCA--------------TLLKNIG--AL-----P--VDMARMYFAE-----------------TVLALEYLH-- 118 (305)
T ss_pred ecCCCCcHH--------------HHHHHcC--CC-----C--HHHHHHHHHH-----------------HHHHHHHHH--
Confidence 999985542 1111100 00 1 1111112111 111222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||..+..
T Consensus 119 ------~~~i~H~dl~p~NIll~~~-~~~~l~dfg~~~~ 150 (305)
T cd05609 119 ------NYGIVHRDLKPDNLLITSM-GHIKLTDFGLSKI 150 (305)
T ss_pred ------HCCccccCCchHHEEECCC-CCEEEeeCCCccc
Confidence 1268999999999999886 7899999998764
No 192
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.52 E-value=0.00099 Score=65.13 Aligned_cols=30 Identities=37% Similarity=0.613 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.+||+|++|.|||++.+++.+.|+||..|.
T Consensus 190 ~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 190 FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 699999999999998764568899999774
No 193
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.52 E-value=0.00035 Score=62.04 Aligned_cols=141 Identities=17% Similarity=0.130 Sum_probs=79.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cccchHHHHHHHHHHhcCCCCceeEEEeC---C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VFFDRNDEIRTFEFMSKHGQGPRLLGRFH---N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~~dr~~E~~~l~~l~~~gl~P~~~~~~~---~--g~v~ 112 (359)
.+.++.|....+|++.... .+..+++|+...... .......|..+++.+...++.+-.-.... + .+++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 5 GELLGRGSFGSVYLALDKD----TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred eeEeeecCceEEEEEEECC----CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3567777788999997642 367888998754331 11112467777777764444432222222 2 2789
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|.++. ..+.+.. . .. ......+.. .+...+..|.+
T Consensus 81 e~~~~~~L~--------------~~~~~~~--~------~~-~~~~~~~~~-----------------~l~~~l~~lh~- 119 (260)
T cd06606 81 EYVSGGSLS--------------SLLKKFG--K------LP-EPVIRKYTR-----------------QILEGLAYLHS- 119 (260)
T ss_pred EecCCCcHH--------------HHHHHcC--C------CC-HHHHHHHHH-----------------HHHHHHHHHHH-
Confidence 999876542 1111111 0 00 111111111 11122222221
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
..++|||++|.||+++++ +.+.|+||..+.....
T Consensus 120 -------~~~~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 120 -------NGIVHRDIKGANILVDSD-GVVKLADFGCAKRLGD 153 (260)
T ss_pred -------CCccccCCCHHHEEEcCC-CCEEEcccccEEeccc
Confidence 378999999999999986 7899999987765443
No 194
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.51 E-value=0.00055 Score=62.40 Aligned_cols=137 Identities=14% Similarity=0.143 Sum_probs=76.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEeecC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFINA 117 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i~G 117 (359)
..+..|....+|++.... .+..+++|+.............|...++.+...++ ++++... .+ ++++||++|
T Consensus 25 ~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~ 99 (286)
T cd06614 25 EKIGEGASGEVYKATDRA----TGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI-VDYYDSYLVGDELWVVMEYMDG 99 (286)
T ss_pred HhccCCCCeEEEEEEEcc----CCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCe-eEEEEEEEECCEEEEEEeccCC
Confidence 456667778899987642 36789999886443211122357777776654443 3344332 22 389999998
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.+|.. ... . |.... + ........ ..+...+..+.
T Consensus 100 ~~L~~-------~l~-------~-~~~~l------~-~~~~~~i~-----------------~~i~~~L~~lH------- 133 (286)
T cd06614 100 GSLTD-------IIT-------Q-NFVRM------N-EPQIAYVC-----------------REVLQGLEYLH------- 133 (286)
T ss_pred CcHHH-------HHH-------H-hccCC------C-HHHHHHHH-----------------HHHHHHHHHHH-------
Confidence 66531 111 0 11000 0 00011000 11112222221
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 134 -~~gi~H~dl~p~ni~i~~~-~~~~l~d~~~~~~ 165 (286)
T cd06614 134 -SQNVIHRDIKSDNILLSKD-GSVKLADFGFAAQ 165 (286)
T ss_pred -hCCeeeCCCChhhEEEcCC-CCEEECccchhhh
Confidence 2468999999999999976 7899999987653
No 195
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.51 E-value=0.00048 Score=62.09 Aligned_cols=139 Identities=13% Similarity=0.171 Sum_probs=76.5
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~ 116 (359)
..++.|....+|++.... .+..+.+|...... ........|..+++.+...++. +++..+.. .+++||++
T Consensus 14 ~~lg~g~~g~v~~~~~~~----~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 14 VVLGKGTYGIVYAARDLS----TQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIV-QYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred EEEecCCceEEEEeEecC----CCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCee-eeeeeeccCCEEEEEEecCC
Confidence 456677778899997542 35678888765432 1111234677777777654444 34444332 27899999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.+|.. .+. .+.+ .. . .. ...+..+.. .+...+..|.
T Consensus 89 ~~~L~~-------~l~------~~~~--~~--~--~~-~~~~~~~~~-----------------qi~~al~~lH------ 125 (268)
T cd06624 89 GGSLSA-------LLR------SKWG--PL--K--DN-EQTIIFYTK-----------------QILEGLKYLH------ 125 (268)
T ss_pred CCCHHH-------HHH------Hhcc--cC--C--Cc-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 876531 110 0000 00 0 00 011111111 1222222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+.+.+.|.||+.+.
T Consensus 126 --~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 126 --DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred --HCCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 23689999999999998644688999998764
No 196
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.50 E-value=0.0008 Score=63.06 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=47.8
Q ss_pred EEEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeC--C---ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N---GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~---g~v~ 112 (359)
.+.|+.|....+|++...... ...+..+.+|+...... .......|..++..+..+.-..++++.+. + .++|
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 356788889999998642110 01245688887654321 11112467888877755544455555432 2 2789
Q ss_pred EeecCCCCC
Q 018207 113 EFINARTLS 121 (359)
Q Consensus 113 e~i~G~~l~ 121 (359)
||++|..|.
T Consensus 92 ey~~~g~L~ 100 (338)
T cd05102 92 EFCKYGNLS 100 (338)
T ss_pred ecCCCCcHH
Confidence 999987653
No 197
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.50 E-value=0.00057 Score=60.92 Aligned_cols=136 Identities=16% Similarity=0.161 Sum_probs=77.0
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeecC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFINA 117 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~G 117 (359)
+.++.|....+|++.... .+..+++|....... ......|..+++.+...++ ++++..... .+++||++|
T Consensus 9 ~~i~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKE----TGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYI-VKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred hhhcCCCCeEEEEEEEcC----CCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcE-eeeeeeeecCCcEEEEEecCCC
Confidence 446667778899987542 257889998764422 2233467777777743333 344444322 378999988
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++.. . +.. .. . +.....+..+.. .+.+.+..+.
T Consensus 83 ~~L~~-------~-------l~~-~~--~-----~l~~~~~~~~~~-----------------~l~~~l~~lh------- 116 (256)
T cd06612 83 GSVSD-------I-------MKI-TN--K-----TLTEEEIAAILY-----------------QTLKGLEYLH------- 116 (256)
T ss_pred CcHHH-------H-------HHh-Cc--c-----CCCHHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 66531 1 100 00 0 000111111111 1112222221
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.|.||..+..
T Consensus 117 -~~~i~H~dl~~~ni~~~~~-~~~~l~dfg~~~~ 148 (256)
T cd06612 117 -SNKKIHRDIKAGNILLNEE-GQAKLADFGVSGQ 148 (256)
T ss_pred -HCCcccCCCCcceEEECCC-CcEEEcccccchh
Confidence 2258999999999999986 7899999987664
No 198
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.50 E-value=0.00083 Score=59.89 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=76.4
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--cc-ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
.+.++.|....+|++.... .+..+++|...... .. ......|..+++.+....+. +++.... + .+|+|
T Consensus 5 ~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~-~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKA----DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNII-EYYENFLEDKALMIVME 79 (256)
T ss_pred EEEecccCceEEEEEEEcC----CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchh-heeeeEecCCEEEEEEe
Confidence 4667778788999987543 36788888765321 11 11123577777766543333 3343332 2 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. . +.+.+.. +.....+..++. .+.+.+..+.
T Consensus 80 ~~~~~~L~~-------~-------~~~~~~~-------~~~~~~~~~~~~-----------------~i~~~l~~lh--- 118 (256)
T cd08220 80 YAPGGTLAE-------Y-------IQKRCNS-------LLDEDTILHFFV-----------------QILLALHHVH--- 118 (256)
T ss_pred cCCCCCHHH-------H-------HHHhccc-------CCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 999876531 1 1111100 000111111111 1112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++++.+.+.||+.+..
T Consensus 119 -----~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 119 -----TKLILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred -----hCCeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 237899999999999987545578999988764
No 199
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.49 E-value=0.00076 Score=63.53 Aligned_cols=138 Identities=14% Similarity=0.169 Sum_probs=77.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---c-cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
-++.|+.|....+|++..... ....+.+|...... . .......|..+++.+....+. +++..+.+ .+|
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv-~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNE---DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCV-NLYGSFKDESYLYLV 109 (340)
T ss_pred EEEEEeecCCeEEEEEEEECC---CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCc-ceEEEEEeCCEEEEE
Confidence 356778888899999975321 13578888764321 1 111123577777777544433 45544432 279
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|..+.. . +. ... ..+ ......+.. ++...+..|.
T Consensus 110 ~Ey~~~g~L~~-------~-------i~---~~~----~~~--~~~~~~~~~-----------------qi~~aL~~LH- 148 (340)
T PTZ00426 110 LEFVIGGEFFT-------F-------LR---RNK----RFP--NDVGCFYAA-----------------QIVLIFEYLQ- 148 (340)
T ss_pred EeCCCCCcHHH-------H-------HH---HcC----CCC--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998865421 1 11 000 000 111111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 149 -------~~~ivHrDLkp~NILl~~~-~~ikL~DFG~a~ 179 (340)
T PTZ00426 149 -------SLNIVYRDLKPENLLLDKD-GFIKMTDFGFAK 179 (340)
T ss_pred -------HCCeEccCCCHHHEEECCC-CCEEEecCCCCe
Confidence 2369999999999999886 789999999875
No 200
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.49 E-value=0.001 Score=62.27 Aligned_cols=29 Identities=28% Similarity=0.470 Sum_probs=25.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 122 ~iiHrDlkp~Nili~~~-~~~kL~DfG~a~ 150 (332)
T cd05623 122 HYVHRDIKPDNILMDMN-GHIRLADFGSCL 150 (332)
T ss_pred CeEecCCCHHHEEECCC-CCEEEeecchhe
Confidence 68999999999999876 789999998763
No 201
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.49 E-value=0.0016 Score=58.19 Aligned_cols=137 Identities=13% Similarity=0.151 Sum_probs=77.1
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i 115 (359)
+.++.|....+|++.... .++.+++|....... .......|...+..+...+ .++++.... + .+++||+
T Consensus 7 ~~i~~g~~~~v~~~~~~~----~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKP----TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY-VVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred eeeeecCCeEEEEEEEcC----CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCC-eeeEEEEEccCCeEEEEEEec
Confidence 556667778889997653 368899998765432 1112245666676666333 344444432 2 3899999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.++.. . +.+-+ .. . ......+.. .+.+.+.. +
T Consensus 82 ~~~~L~~-------~-------l~~~~--~l------~-~~~~~~~~~-----------------~l~~~l~~----l-- 115 (264)
T cd06623 82 DGGSLAD-------L-------LKKVG--KI------P-EPVLAYIAR-----------------QILKGLDY----L-- 115 (264)
T ss_pred CCCcHHH-------H-------HHHcC--CC------C-HHHHHHHHH-----------------HHHHHHHH----H--
Confidence 9876531 1 11000 00 0 011111111 11111111 1
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.....++|+|++|.||+++++ +.+.++||..+..
T Consensus 116 -h~~~~~~H~~l~~~ni~~~~~-~~~~l~df~~~~~ 149 (264)
T cd06623 116 -HTKRHIIHRDIKPSNLLINSK-GEVKIADFGISKV 149 (264)
T ss_pred -hccCCCccCCCCHHHEEECCC-CCEEEccCcccee
Confidence 111588999999999999986 7899999987654
No 202
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.48 E-value=0.00047 Score=65.29 Aligned_cols=30 Identities=27% Similarity=0.524 Sum_probs=26.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 143 ~ivHrDlkp~NIl~~~~-~~~kl~Dfg~a~~ 172 (359)
T cd07876 143 GIIHRDLKPSNIVVKSD-CTLKILDFGLART 172 (359)
T ss_pred CcccCCCCHHHEEECCC-CCEEEecCCCccc
Confidence 68999999999999986 7899999997753
No 203
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.48 E-value=0.0011 Score=58.98 Aligned_cols=135 Identities=13% Similarity=0.101 Sum_probs=74.7
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeec
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFIN 116 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~ 116 (359)
.++.|....+|++... .++.+.+|........ ......|..+++.+...++ ++++....+ .+++||++
T Consensus 2 ~lg~g~~g~v~~~~~~-----~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~~~ 75 (251)
T cd05041 2 KIGKGNFGDVYKGVLK-----GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNI-VKLIGVCVQKQPIYIVMELVP 75 (251)
T ss_pred ccccCCCceEEEEEEe-----CCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-EEEEEEEecCCCeEEEEEcCC
Confidence 3566777889999753 2688899987643211 1122457777776654333 344444322 38999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. .+. ..... .. ...+..+.. .+...+..+.
T Consensus 76 ~~~l~~--------------~l~---~~~~~----~~-~~~~~~~~~-----------------~~~~~l~~lH------ 110 (251)
T cd05041 76 GGSLLT--------------FLR---KKKNR----LT-VKKLLQMSL-----------------DAAAGMEYLE------ 110 (251)
T ss_pred CCcHHH--------------HHH---hcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865421 111 10000 00 111111111 1111122221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 111 --~~~i~h~di~p~nili~~~-~~~~l~d~g~~~~ 142 (251)
T cd05041 111 --SKNCIHRDLAARNCLVGEN-NVLKISDFGMSRE 142 (251)
T ss_pred --hCCEehhhcCcceEEEcCC-CcEEEeecccccc
Confidence 2368999999999999886 7899999987764
No 204
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.48 E-value=0.00026 Score=69.56 Aligned_cols=32 Identities=34% Similarity=0.658 Sum_probs=28.6
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...+|||+|++|+|||+|.+ |-+.|-||..|.
T Consensus 746 HkmGFIHRDiKPDNILIDrd-GHIKLTDFGLCT 777 (1034)
T KOG0608|consen 746 HKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCT 777 (1034)
T ss_pred HhccceecccCccceEEccC-Cceeeeeccccc
Confidence 45699999999999999997 789999999764
No 205
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.47 E-value=0.0008 Score=64.28 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=47.9
Q ss_pred EEEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
.+.|+.|....+|++...... ...+..+.+|+...... .......|..+++.+..+.-.+++++.+.. .+|+|
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e 122 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE 122 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence 456677888899988642110 01234688888754321 111123688888877555555666665532 37999
Q ss_pred eecCCCC
Q 018207 114 FINARTL 120 (359)
Q Consensus 114 ~i~G~~l 120 (359)
|++|..|
T Consensus 123 y~~~g~L 129 (374)
T cd05106 123 YCCYGDL 129 (374)
T ss_pred hccCCcH
Confidence 9988655
No 206
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.47 E-value=0.0007 Score=61.34 Aligned_cols=153 Identities=13% Similarity=0.052 Sum_probs=78.7
Q ss_pred EEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
+.++.|....+|++...... ......+.+|+....... .....+|.++++.+....+. +++..+. + ++++||
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIV-KFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCch-heeeEEecCCCeEEEEec
Confidence 44666777889988653211 012467889987644221 11224677777777654443 3443332 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. .+..-+.....++... .....-....+..+. ..+...+..+
T Consensus 90 ~~~~~L~~-------~i~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~-----------------~~i~~~l~~l----- 138 (280)
T cd05049 90 MEHGDLNK-------FLRSHGPDAAFLKSPD--SPMGELTLSQLLQIA-----------------VQIASGMVYL----- 138 (280)
T ss_pred CCCCCHHH-------HHHhcCCchhhhcccc--cccccccHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 99876531 1111111111111000 000000000111111 1111111211
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
....++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 139 ---H~~~i~h~dlkp~nili~~~-~~~kl~d~g~~~ 170 (280)
T cd05049 139 ---ASQHFVHRDLATRNCLVGYD-LVVKIGDFGMSR 170 (280)
T ss_pred ---hhCCeeccccccceEEEcCC-CeEEECCcccce
Confidence 12368999999999999986 789999998765
No 207
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.47 E-value=0.0013 Score=59.89 Aligned_cols=29 Identities=21% Similarity=0.331 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 115 ~ivH~dikp~Nili~~~-~~~~l~Dfg~~~ 143 (277)
T cd05607 115 DIVYRDMKPENVLLDDQ-GNCRLSDLGLAV 143 (277)
T ss_pred CEEEccCChHhEEEcCC-CCEEEeeceeee
Confidence 68999999999999986 789999998765
No 208
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.46 E-value=0.0009 Score=60.86 Aligned_cols=137 Identities=19% Similarity=0.155 Sum_probs=75.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i~ 116 (359)
..|+.|....+|++.... .+..+.+|........ ......|..+++.+...++ ++++..+ .+ ..++||++
T Consensus 11 ~~lg~g~~g~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-i~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 11 GELGDGAFGKVYKAQNKE----TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-VKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred hhcccCCCeEEEEEEECC----CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCe-eeEEEEEeeCCEEEEEEEecC
Confidence 346667788999987542 2566777776543211 1122357777776654443 3344333 22 37999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+.. . ++.... +-....+..+.. .+.+.+..|.
T Consensus 86 ~~~l~~-------~----------~~~~~~-----~l~~~~~~~~~~-----------------qi~~~L~~LH------ 120 (282)
T cd06643 86 GGAVDA-------V----------MLELER-----PLTEPQIRVVCK-----------------QTLEALNYLH------ 120 (282)
T ss_pred CCcHHH-------H----------HHhcCC-----CCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865421 0 111000 100111111111 1112222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||..+..
T Consensus 121 --~~~i~H~dlkp~nili~~~-~~~kl~dfg~~~~ 152 (282)
T cd06643 121 --ENKIIHRDLKAGNILFTLD-GDIKLADFGVSAK 152 (282)
T ss_pred --HCCeeecCCCcccEEEccC-CCEEEcccccccc
Confidence 1368999999999999886 7899999987754
No 209
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.46 E-value=0.00033 Score=63.74 Aligned_cols=137 Identities=20% Similarity=0.213 Sum_probs=76.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--cc-chHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FF-DRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~-dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
++.|+.|....+|++.... .+..+++|........ .. .-..|..+++.+...++ ++++....+ .+|+|
T Consensus 6 ~~~lg~g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKE----TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL-VNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred eeeeccCCCeEEEEEEECC----CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcch-hhHHHhcccCCeEEEEEe
Confidence 4667778888999997642 3678999987543211 11 11356777766654333 334433322 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|..+. .+ . +. ... .. ...+..+. ..+...+..|.
T Consensus 81 ~~~~~~l~-----------~~---~---~~---~~~--~~-~~~~~~~~-----------------~~i~~~l~~LH--- 117 (286)
T cd07846 81 FVDHTVLD-----------DL---E---KY---PNG--LD-ESRVRKYL-----------------FQILRGIEFCH--- 117 (286)
T ss_pred cCCccHHH-----------HH---H---hc---cCC--CC-HHHHHHHH-----------------HHHHHHHHHHH---
Confidence 99874432 00 0 00 000 00 11111111 11222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 118 -----~~~i~h~~l~p~ni~~~~~-~~~~l~dfg~~~~ 149 (286)
T cd07846 118 -----SHNIIHRDIKPENILVSQS-GVVKLCDFGFART 149 (286)
T ss_pred -----HCCccccCCCHHHEEECCC-CcEEEEeeeeeee
Confidence 2368999999999999886 7899999987754
No 210
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.46 E-value=0.0016 Score=59.33 Aligned_cols=30 Identities=27% Similarity=0.426 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||+.+..
T Consensus 128 ~ivH~dikp~Nili~~~-~~~kl~dfg~~~~ 157 (288)
T cd07863 128 CIVHRDLKPENILVTSG-GQVKLADFGLARI 157 (288)
T ss_pred CeecCCCCHHHEEECCC-CCEEECccCcccc
Confidence 68999999999999986 7899999987753
No 211
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.45 E-value=0.00079 Score=62.82 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=26.9
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.|||++++ +.+.|+||..+..
T Consensus 116 givH~Dlkp~NIll~~~-~~~kL~DfG~~~~ 145 (325)
T cd05604 116 NIVYRDLKPENILLDSQ-GHVVLTDFGLCKE 145 (325)
T ss_pred CeeecCCCHHHeEECCC-CCEEEeecCCccc
Confidence 69999999999999986 7899999998754
No 212
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.45 E-value=0.0016 Score=57.78 Aligned_cols=141 Identities=14% Similarity=0.195 Sum_probs=77.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
.+.+..|....+|++.... .+..+++|....... .......|.++++.+...++ ++++.... + .+++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKS----DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI-IKYYESFEEKGKLCIVME 79 (258)
T ss_pred EeeeccCCCeEEEEEEEcC----CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCCh-hheEEEEecCCEEEEEEE
Confidence 3556677788999998643 368899988754321 11112356777776663333 33333322 2 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. .+.+.+. ... +.....+..+.. .+...+..|.
T Consensus 80 ~~~~~~L~~--------------~l~~~~~---~~~--~~~~~~~~~i~~-----------------~i~~~l~~lh--- 120 (258)
T cd08215 80 YADGGDLSQ--------------KIKKQKK---EGK--PFPEEQILDWFV-----------------QLCLALKYLH--- 120 (258)
T ss_pred ecCCCcHHH--------------HHHHhhc---cCC--CcCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998865531 1111110 000 000111111111 1112222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.|+||..+..
T Consensus 121 -----~~~~~H~dl~~~nil~~~~-~~~~l~d~~~~~~ 152 (258)
T cd08215 121 -----SRKILHRDIKPQNIFLTSN-GLVKLGDFGISKV 152 (258)
T ss_pred -----hCCEecccCChHHeEEcCC-CcEEECCccceee
Confidence 2278999999999999986 7899999998765
No 213
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.45 E-value=0.00067 Score=62.00 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=26.5
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++++ +.+.++||..+.
T Consensus 139 ~~i~H~dlkp~Nili~~~-~~~kl~dfg~~~ 168 (288)
T cd05093 139 QHFVHRDLATRNCLVGEN-LLVKIGDFGMSR 168 (288)
T ss_pred CCeeecccCcceEEEccC-CcEEeccCCccc
Confidence 368999999999999986 788999998775
No 214
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.45 E-value=0.0015 Score=64.26 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=74.4
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe-CC---ceEEEeec
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF-HN---GRVEEFIN 116 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~---g~v~e~i~ 116 (359)
...|+.|....||++.... .+..+++|..... ...+|.++++.|...++.. ++... .+ .++++++.
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~----~~~~vavK~~~~~-----~~~~E~~iL~~L~HpnIv~-l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPD----YPQRVVVKAGWYA-----SSVHEARLLRRLSHPAVLA-LLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred EEEEccCCCeEEEEEEECC----CCCEEEEeccccc-----CHHHHHHHHHHCCCCCCCc-EEEEEEECCEEEEEEEccC
Confidence 4556778889999998653 3578888853211 2247999998887655543 44332 22 26777775
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|. +...+. ...+ +.....+..+.. .+...+..|.
T Consensus 244 ~~-----------L~~~l~---~~~~---------~l~~~~~~~i~~-----------------qi~~aL~yLH------ 277 (461)
T PHA03211 244 SD-----------LYTYLG---ARLR---------PLGLAQVTAVAR-----------------QLLSAIDYIH------ 277 (461)
T ss_pred CC-----------HHHHHH---hcCC---------CCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 42 111110 0000 000111111111 1112222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.|||++.+ +.+.|+||..+..
T Consensus 278 --~~gIvHrDLKP~NILl~~~-~~vkL~DFGla~~ 309 (461)
T PHA03211 278 --GEGIIHRDIKTENVLVNGP-EDICLGDFGAACF 309 (461)
T ss_pred --HCCEEECcCCHHHEEECCC-CCEEEcccCCcee
Confidence 2368999999999999886 7899999998753
No 215
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.44 E-value=0.0022 Score=58.60 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=78.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cccchHHHHHHHHHHhcCCCCceeEEEe---CC------
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VFFDRNDEIRTFEFMSKHGQGPRLLGRF---HN------ 108 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~~dr~~E~~~l~~l~~~gl~P~~~~~~---~~------ 108 (359)
...|+.|....+|++.... .+..+++|....... .......|..++..+..+...++++... +.
T Consensus 6 ~~~lg~g~~g~vy~~~~~~----~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKN----TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred eeEecccCCeEEEEEEECC----CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 4567778888999997642 367899998754321 1112246888888876644444444432 12
Q ss_pred ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHH
Q 018207 109 GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEIST 188 (359)
Q Consensus 109 g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 188 (359)
.+++||++| .+. .. +...+.. .. .+-.......+.. .+.+.+..
T Consensus 82 ~lv~e~~~~-~l~----------~~----~~~~~~~--~~--~~~~~~~~~~~~~-----------------qi~~~L~~ 125 (295)
T cd07837 82 YLVFEYLDS-DLK----------KF----MDSNGRG--PG--RPLPAKTIKSFMY-----------------QLLKGVAH 125 (295)
T ss_pred EEEeeccCc-CHH----------HH----HHHhccc--CC--CCCCHHHHHHHHH-----------------HHHHHHHH
Confidence 378898876 221 10 1111110 00 0101111221211 11222222
Q ss_pred HHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 189 LEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 189 l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
|. ...++|+|++|+||+++.+++.+.+.||..+.
T Consensus 126 LH--------~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 126 CH--------KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred HH--------HCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 22 23689999999999999844788999998765
No 216
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.44 E-value=0.00095 Score=63.78 Aligned_cols=79 Identities=11% Similarity=0.098 Sum_probs=47.4
Q ss_pred EEecCCcceeEEEEEeCCC-CCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTK-TETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~-~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
+.|+.|....||++..... ....+..+.+|+....... .....+|..++..+..+.-..++++.+.. .+||||
T Consensus 41 ~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 120 (375)
T cd05104 41 KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEY 120 (375)
T ss_pred heecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehh
Confidence 5677788899999863210 0012457788887533211 11123688888888655445566665532 389999
Q ss_pred ecCCCC
Q 018207 115 INARTL 120 (359)
Q Consensus 115 i~G~~l 120 (359)
++|-+|
T Consensus 121 ~~~g~L 126 (375)
T cd05104 121 CCYGDL 126 (375)
T ss_pred ccCCcH
Confidence 998655
No 217
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.44 E-value=0.0011 Score=59.45 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=74.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc----cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE----VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
+.++.|....+|++.... .++.+++|+...... .......|...+.....+...++++..... .+++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 77 (260)
T cd05611 2 KPISKGAFGSVYLAKKRS----TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVME 77 (260)
T ss_pred ccCCcCCCeeEEEEEecC----CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence 456777888999987532 367899998754311 111112333333322233334556655432 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. . +.... .. + ...+..+.. .+.+.+..+.
T Consensus 78 ~~~~~~L~~-------~-------l~~~~--~~-----~--~~~~~~i~~-----------------qi~~aL~~lH--- 114 (260)
T cd05611 78 YLNGGDCAS-------L-------IKTLG--GL-----P--EDWAKQYIA-----------------EVVLGVEDLH--- 114 (260)
T ss_pred ccCCCCHHH-------H-------HHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 999976531 1 11100 00 1 111111111 1112222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 115 -----~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~ 146 (260)
T cd05611 115 -----QRGIIHRDIKPENLLIDQT-GHLKLTDFGLSRN 146 (260)
T ss_pred -----HCCeecCCCCHHHeEECCC-CcEEEeeccccee
Confidence 1268999999999999886 7899999986653
No 218
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.43 E-value=0.0021 Score=57.25 Aligned_cols=138 Identities=17% Similarity=0.143 Sum_probs=75.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
..++.|....+|++.... .+..+++|...... ....+...|..+++.+....+. +++.... + .+|+||
T Consensus 6 ~~l~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKA----DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYII-RYYESFLDKGKLNIVMEY 80 (256)
T ss_pred EEecCCCCeEEEEEEEcC----CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCee-hheeeeccCCEEEEEEEe
Confidence 556777788999997642 36888898765321 1111123466666666543333 3333332 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. . +. ... .. +.....+..+.. .+...+..+.
T Consensus 81 ~~~~~L~~-------~-------l~---~~~--~~--~~~~~~~~~i~~-----------------~l~~al~~lH---- 118 (256)
T cd08529 81 AENGDLHK-------L-------LK---MQR--GR--PLPEDQVWRFFI-----------------QILLGLAHLH---- 118 (256)
T ss_pred CCCCcHHH-------H-------HH---Hhc--CC--CCCHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 99875531 1 11 100 00 000111111111 1112222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 119 ----~~~i~h~dl~~~nili~~~-~~~~l~df~~~~~ 150 (256)
T cd08529 119 ----SKKILHRDIKSLNLFLDAY-DNVKIGDLGVAKL 150 (256)
T ss_pred ----HCCcccCCCCcceEEEeCC-CCEEEccccccee
Confidence 2378999999999999986 7899999987663
No 219
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.43 E-value=0.00052 Score=61.62 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=27.2
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|++|.||+++++ +.+.++||+.+..
T Consensus 112 ~~~~h~dl~~~nilv~~~-~~~~l~df~~~~~ 142 (262)
T cd05572 112 RGIIYRDLKPENLLLDSN-GYVKLVDFGFAKK 142 (262)
T ss_pred CCcccCCCCHHHEEEcCC-CCEEEeeCCcccc
Confidence 478999999999999886 7899999987764
No 220
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.43 E-value=0.0023 Score=58.02 Aligned_cols=30 Identities=23% Similarity=0.533 Sum_probs=26.4
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++++ +.+.|+||..+..
T Consensus 124 ~i~h~dlkp~nil~~~~-~~~kl~dfg~~~~ 153 (283)
T cd06617 124 SVIHRDVKPSNVLINRN-GQVKLCDFGISGY 153 (283)
T ss_pred CeecCCCCHHHEEECCC-CCEEEeecccccc
Confidence 68999999999999886 7899999987653
No 221
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.43 E-value=0.0021 Score=58.70 Aligned_cols=139 Identities=13% Similarity=-0.011 Sum_probs=76.4
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cccc-hHHHHHHHHHHhcCCCCceeEEEeC-C--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VFFD-RNDEIRTFEFMSKHGQGPRLLGRFH-N--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~-~--g~v~e 113 (359)
.+.|+.|....+|++.... .+..+++|....... .... ...|..+++.+....+.+-...... + .++++
T Consensus 5 ~~~ig~G~~g~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred eEEeecCCCeEEEEEEEcC----CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 4567778888999987653 367888887653211 0011 1257777777755444433222222 2 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|..+.. ... ... ....+ ......+.. .+...+..+.
T Consensus 81 ~~~g~~L~~-------~l~----------~~~--~~~l~--~~~~~~~~~-----------------qi~~~l~~lH--- 119 (285)
T cd05630 81 LMNGGDLKF-------HIY----------HMG--EAGFE--EGRAVFYAA-----------------EICCGLEDLH--- 119 (285)
T ss_pred ecCCCcHHH-------HHH----------Hhc--ccCCC--HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998866531 110 000 00000 111111111 1112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 120 -----~~~iiH~dikp~Nil~~~~-~~~~l~Dfg~~~ 150 (285)
T cd05630 120 -----QERIVYRDLKPENILLDDH-GHIRISDLGLAV 150 (285)
T ss_pred -----hCCEEeCCCCHHHEEECCC-CCEEEeecccee
Confidence 2368999999999999986 789999998764
No 222
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.42 E-value=0.00082 Score=60.50 Aligned_cols=141 Identities=17% Similarity=0.192 Sum_probs=76.5
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
.+.|+.|..+.+|+...... +.....+.+|........ ..+...|..+++.+....+ .+++.... + .+++||
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~-~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~iv~e~ 86 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLP-GKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNI-IRLEGVVTKSRPVMIITEY 86 (266)
T ss_pred eeEecCCccceEEEEEEccC-CCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCc-ceEeEEEecCCceEEEEEc
Confidence 35667777889999876421 112356778876543211 1112346677766654333 34544432 2 378999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
.+|.++.. . +.+ |... .. ...+..+.. .+...+..|.
T Consensus 87 ~~~~~L~~-------~-------~~~-~~~~------~~-~~~~~~~~~-----------------~l~~~l~~Lh---- 123 (266)
T cd05033 87 MENGSLDK-------F-------LRE-NDGK------FT-VGQLVGMLR-----------------GIASGMKYLS---- 123 (266)
T ss_pred CCCCCHHH-------H-------HHh-ccCC------CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865431 1 100 1100 00 111111111 1112222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 124 ----~~~i~H~di~p~nili~~~-~~~~l~dfg~~~~ 155 (266)
T cd05033 124 ----EMNYVHRDLAARNILVNSN-LVCKVSDFGLSRR 155 (266)
T ss_pred ----hCCcccCCCCcceEEEcCC-CCEEECccchhhc
Confidence 1368999999999999986 7789999987764
No 223
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.42 E-value=0.00054 Score=62.31 Aligned_cols=140 Identities=18% Similarity=0.222 Sum_probs=77.9
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--cccc-chHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVFF-DRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e 113 (359)
.+.|+.|....+|++.... .+..+++|.+.... .... ....|.++++.+...++ ++++... .+ .+++|
T Consensus 6 ~~~i~~g~~~~v~~~~~~~----~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKA----TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI-VNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred EEEecccCCeeEEEEEeCC----CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe-eehhheEEECCEEEEEEe
Confidence 3456667778899987542 36789999876431 1111 22468888887774443 3333332 22 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|..+. .+ +.+ +.. .. ...+.... ..+...+..|.
T Consensus 81 ~~~~~~l~-----------~~---~~~------~~~--~~-~~~~~~~~-----------------~~i~~~l~~LH--- 117 (288)
T cd07833 81 YVERTLLE-----------LL---EAS------PGG--LP-PDAVRSYI-----------------WQLLQAIAYCH--- 117 (288)
T ss_pred cCCCCHHH-----------HH---Hhc------CCC--CC-HHHHHHHH-----------------HHHHHHHHHHH---
Confidence 99864321 10 000 000 00 01111111 11112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
...++|+|++|.||+++++ +.+.|.||+.+..-..
T Consensus 118 -----~~~i~H~dl~~~ni~~~~~-~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 118 -----SHNIIHRDIKPENILVSES-GVLKLCDFGFARALRA 152 (288)
T ss_pred -----HCCeecCCCCHHHeEECCC-CCEEEEeeecccccCC
Confidence 2268999999999999986 7899999998775433
No 224
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.42 E-value=0.00048 Score=61.56 Aligned_cols=140 Identities=17% Similarity=0.163 Sum_probs=76.0
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-ccc-chHHHHHHHHHHhcCCCCceeEEEeC-C--ceEEEeecC
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VFF-DRNDEIRTFEFMSKHGQGPRLLGRFH-N--GRVEEFINA 117 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~~-dr~~E~~~l~~l~~~gl~P~~~~~~~-~--g~v~e~i~G 117 (359)
.++.|..+.+|++...... +....+.+|....... ... +...|..++..+...++. +++.... + ..++||.+|
T Consensus 2 ~ig~g~~~~v~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~v~e~~~~ 79 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSG-GKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLI-RLYGVVLTHPLMMVTELAPL 79 (257)
T ss_pred cCCccCcccEEeeeEecCC-CCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCcc-ceeEEEcCCeEEEEEEecCC
Confidence 3566788899999764311 1123678888765432 111 224677777777654443 2333222 2 378999987
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++.. .+. +... . +..+..+..+.. .+.+.+..+.
T Consensus 80 ~~L~~--------------~l~---~~~~--~--~~~~~~~~~~~~-----------------qi~~~L~~lH------- 114 (257)
T cd05040 80 GSLLD--------------RLR---KDAL--G--HFLISTLCDYAV-----------------QIANGMRYLE------- 114 (257)
T ss_pred CcHHH--------------HHH---hccc--c--cCcHHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 65431 111 1000 0 000111111111 1112222221
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 115 -~~~i~H~di~p~nil~~~~-~~~kl~dfg~~~~ 146 (257)
T cd05040 115 -SKRFIHRDLAARNILLASD-DKVKIGDFGLMRA 146 (257)
T ss_pred -hCCccccccCcccEEEecC-CEEEecccccccc
Confidence 2368999999999999987 7899999987764
No 225
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.41 E-value=0.0018 Score=58.09 Aligned_cols=30 Identities=23% Similarity=0.421 Sum_probs=26.6
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|+||+++++ +.+.|+||..+.
T Consensus 120 ~~i~H~dl~~~ni~~~~~-~~~~l~d~g~~~ 149 (265)
T cd06605 120 HKIIHRDVKPSNILVNSR-GQIKLCDFGVSG 149 (265)
T ss_pred CCeecCCCCHHHEEECCC-CCEEEeecccch
Confidence 579999999999999986 789999998764
No 226
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.40 E-value=0.00095 Score=60.00 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=76.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-------ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ce
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-------FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GR 110 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-------~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~ 110 (359)
+.++.|....+|.+.... .+..+++|+....... ......|..+++.+...++. +++.... + .+
T Consensus 6 ~~lg~g~~~~v~~~~~~~----~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~~ 80 (268)
T cd06630 6 QQLGTGAFSSCYQARDVK----TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII-RMLGATCEDSHFNL 80 (268)
T ss_pred ceecCcCceEEEEEEEcC----CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCcee-hhhceeccCCeEEE
Confidence 456778888999987532 3678888887532110 11124577777777654443 3333332 2 38
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
|++|.+|.++.. .+.+- . +. + ......|+. .+...+..|.
T Consensus 81 v~e~~~~~~L~~--------------~l~~~-~-~~-----~--~~~~~~~~~-----------------ql~~al~~LH 120 (268)
T cd06630 81 FVEWMAGGSVSH--------------LLSKY-G-AF-----K--EAVIINYTE-----------------QLLRGLSYLH 120 (268)
T ss_pred EEeccCCCcHHH--------------HHHHh-C-CC-----C--HHHHHHHHH-----------------HHHHHHHHHH
Confidence 999999865531 11110 0 00 0 111122221 1222222222
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.++..+.|+||..+..
T Consensus 121 --------~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 121 --------ENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred --------hCCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 237899999999999987544688999988754
No 227
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.40 E-value=0.0019 Score=58.56 Aligned_cols=137 Identities=18% Similarity=0.168 Sum_probs=77.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--cc-ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
..++.|..+.+|++.... .+..+++|...... .. ..+...|..+++.+... -.++++.... + .+|+||
T Consensus 6 ~~l~~g~~~~v~~~~~~~----~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRE----TGETVALKKVALRRLEGGIPNQALREIKALQACQHP-YVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred eecccCCCcEEEEEEECC----CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCC-CCcceeeEEecCCeeEEEecc
Confidence 557778888999997542 36788999875432 11 11234677777777532 2344554433 2 278999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
+ |.++.. .+. .... +-.......+.. .+.+.+..+.
T Consensus 81 ~-~~~L~~--------------~~~---~~~~-----~~~~~~~~~~~~-----------------~i~~~l~~lH---- 116 (286)
T cd07832 81 M-PSDLSE--------------VLR---DEER-----PLPEAQVKSYMR-----------------MLLKGVAYMH---- 116 (286)
T ss_pred c-CCCHHH--------------HHH---hcCC-----CCCHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 8 655420 111 1000 000111111111 1112222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.||+++++ +.+.++||+.+..-
T Consensus 117 ----~~~i~H~dl~p~ni~~~~~-~~~~l~dfg~~~~~ 149 (286)
T cd07832 117 ----ANGIMHRDLKPANLLISAD-GVLKIADFGLARLF 149 (286)
T ss_pred ----HCCeecCCcCHHHEEEcCC-CcEEEeeeeecccc
Confidence 1258999999999999986 78999999977643
No 228
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.40 E-value=0.0015 Score=67.41 Aligned_cols=139 Identities=15% Similarity=0.162 Sum_probs=78.7
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cc-cchHHHHHHHHHHhcCCCCceeEEEeC--C--ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VF-FDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v 111 (359)
-++.|+.|....+|++.... .+..+.+|+...... .. .....|..++..+....+ .+++.... + .+|
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~----~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-v~~~~~~~~~~~~~lV 82 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKN----NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFI-VHLYYSLQSANNVYLV 82 (669)
T ss_pred EEEEEecCCCeEEEEEEECC----CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCc-CeEEEEEEECCEEEEE
Confidence 34677778888999998642 367899998754210 01 112356666665544333 34444332 2 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|..|.. .+.+.+. . + ......+.. .+...+..|.
T Consensus 83 mEy~~g~~L~~--------------li~~~~~--l-----~--~~~~~~i~~-----------------qil~aL~yLH- 121 (669)
T cd05610 83 MEYLIGGDVKS--------------LLHIYGY--F-----D--EEMAVKYIS-----------------EVALALDYLH- 121 (669)
T ss_pred EeCCCCCCHHH--------------HHHhcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998865421 1111110 0 0 011111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.|||++.+ +.+.|+||..+...
T Consensus 122 -------~~gIiHrDLKP~NILl~~~-g~vkL~DFGls~~~ 154 (669)
T cd05610 122 -------RHGIIHRDLKPDNMLISNE-GHIKLTDFGLSKVT 154 (669)
T ss_pred -------hCCEEeCCccHHHEEEcCC-CCEEEEeCCCCccc
Confidence 1269999999999999886 78999999988743
No 229
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.40 E-value=0.004 Score=60.10 Aligned_cols=90 Identities=16% Similarity=0.102 Sum_probs=52.3
Q ss_pred CCCCCCCCCCeE-EEEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEE
Q 018207 29 EWEDVVDRNSLQ-VIPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLG 104 (359)
Q Consensus 29 ~w~~~~~~~~~~-i~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~ 104 (359)
+|.. +...+. .+.|+.|....+|+....... ......+.+|+....... ......|..++..+..+--.+++++
T Consensus 31 ~~~~--~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEF--PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceec--cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 4653 333343 356677888899988642111 011346888887543211 1112357888887765544566766
Q ss_pred EeCC----ceEEEeecCCCC
Q 018207 105 RFHN----GRVEEFINARTL 120 (359)
Q Consensus 105 ~~~~----g~v~e~i~G~~l 120 (359)
.+.. .+|+||++|.+|
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L 128 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDL 128 (400)
T ss_pred EEccCCceEEEEEecCCCcH
Confidence 6542 389999998665
No 230
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=97.39 E-value=0.0023 Score=58.72 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=28.0
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++++ +.+.++||..|.
T Consensus 138 ~~~IlHRDLKPQNlLi~~~-G~lKlaDFGlAr 168 (323)
T KOG0594|consen 138 SHGILHRDLKPQNLLISSS-GVLKLADFGLAR 168 (323)
T ss_pred hCCeecccCCcceEEECCC-CcEeeeccchHH
Confidence 4589999999999999996 899999999876
No 231
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.39 E-value=0.00082 Score=60.67 Aligned_cols=140 Identities=14% Similarity=0.130 Sum_probs=74.5
Q ss_pred ecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeecC
Q 018207 44 VKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFINA 117 (359)
Q Consensus 44 l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~G 117 (359)
|+.|....+|++..... ..+..+++|........ ......|..+++.+...++ +++++...+ .+|+||++|
T Consensus 3 lg~G~~g~Vy~~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 3 IGNGWFGKVILGEVNSG--YTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNL-LQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred ccccCCceEEEEEEcCC--CCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCE-eeEEEEEcCCCCcEEEEECCCC
Confidence 56677788999865321 12457888876543211 1122357777776654443 345554432 389999987
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
..+.. . +... .......+. ...+..+.. .+...+..+.
T Consensus 80 g~L~~-------~-------l~~~---~~~~~~~~~-~~~~~~~~~-----------------qi~~al~~lH------- 117 (269)
T cd05087 80 GDLKG-------Y-------LRSC---RKAELMTPD-PTTLQRMAC-----------------EIALGLLHLH------- 117 (269)
T ss_pred CcHHH-------H-------HHHh---hhccccccc-HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 65421 1 1100 000000011 111111111 1112222222
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 118 -~~~i~H~dlkp~nil~~~~-~~~kL~dfg~~~ 148 (269)
T cd05087 118 -KNNFIHSDLALRNCLLTAD-LTVKIGDYGLSH 148 (269)
T ss_pred -HCCEeccccCcceEEEcCC-CcEEECCccccc
Confidence 2369999999999999986 789999998774
No 232
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.39 E-value=0.00082 Score=63.80 Aligned_cols=30 Identities=27% Similarity=0.524 Sum_probs=26.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 146 ~ivH~Dlkp~NIll~~~-~~~kL~DfG~a~~ 175 (364)
T cd07875 146 GIIHRDLKPSNIVVKSD-CTLKILDFGLART 175 (364)
T ss_pred CeecCCCCHHHEEECCC-CcEEEEeCCCccc
Confidence 78999999999999986 7899999998753
No 233
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.39 E-value=0.001 Score=62.24 Aligned_cols=30 Identities=27% Similarity=0.421 Sum_probs=26.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.|||++.+ +.+.|+||..+..
T Consensus 116 ~ivHrDlkp~Nili~~~-~~~kl~Dfg~a~~ 145 (330)
T cd05586 116 DIVYRDLKPENILLDAT-GHIALCDFGLSKA 145 (330)
T ss_pred CeEeccCCHHHeEECCC-CCEEEecCCcCcC
Confidence 69999999999999986 7899999998754
No 234
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.39 E-value=0.0017 Score=58.22 Aligned_cols=137 Identities=18% Similarity=0.200 Sum_probs=76.9
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~ 116 (359)
+.++.|....+|++.... +..+.+|+...... ...+...|..+++.+....+ .+++....+ .+++||.+
T Consensus 12 ~~ig~g~~~~vy~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKN-----RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHL-ISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred hhhccCCCccEEEeEecC-----CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcch-hheeeeEecCCCeEEEEeecc
Confidence 456677888999987542 57788888754322 11122457777766654333 334443322 38999999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. .+. ... .. ......+..+.. .+...+..|.
T Consensus 86 ~~~L~~--------------~~~---~~~--~~--~~~~~~~~~~~~-----------------~i~~al~~lH------ 121 (261)
T cd05148 86 KGSLLA--------------FLR---SPE--GQ--VLPVASLIDMAC-----------------QVAEGMAYLE------ 121 (261)
T ss_pred cCCHHH--------------HHh---cCC--CC--CCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865531 111 100 00 001111211211 1222222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.+.||+.+..
T Consensus 122 --~~~i~h~dl~~~nilv~~~-~~~kl~d~g~~~~ 153 (261)
T cd05148 122 --EQNSIHRDLAARNILVGED-LVCKVADFGLARL 153 (261)
T ss_pred --HCCeeccccCcceEEEcCC-ceEEEccccchhh
Confidence 1258999999999999986 7889999998764
No 235
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.38 E-value=0.00063 Score=64.79 Aligned_cols=29 Identities=24% Similarity=0.571 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.|||++++ +.+.|+||..+.
T Consensus 123 ~ivH~dlkp~Nili~~~-~~~kL~Dfg~a~ 151 (372)
T cd07853 123 GILHRDIKPGNLLVNSN-CVLKICDFGLAR 151 (372)
T ss_pred CeeCCCCChHHEEECCC-CCEEecccccee
Confidence 68999999999999986 789999998764
No 236
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.37 E-value=0.0022 Score=57.20 Aligned_cols=141 Identities=17% Similarity=0.137 Sum_probs=77.9
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccchHHHHHHHHHHhcCCCCceeEEEe-CC---ceEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFDRNDEIRTFEFMSKHGQGPRLLGRF-HN---GRVE 112 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~---g~v~ 112 (359)
.++.++.|....+|.+.... .+..+++|...... ....+..+|..+++.+...++. +++..+ .+ ..++
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTE----DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNII-AYYNHFMDDNTLLIEM 78 (256)
T ss_pred EeeEecccCCceEEEEEEcC----CCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCee-EEEeEEecCCeEEEEE
Confidence 34667778778888887542 36788888754321 1112234678888877544443 344333 22 2789
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..+. +.+.+-. ... .. ...+..+.. .+...+..+.
T Consensus 79 e~~~~~~L~--------------~~~~~~~-----~~~-~~-~~~~~~~~~-----------------~l~~~l~~lh-- 118 (256)
T cd08221 79 EYANGGTLY--------------DKIVRQK-----GQL-FE-EEMVLWYLF-----------------QIVSAVSYIH-- 118 (256)
T ss_pred EecCCCcHH--------------HHHHhcc-----ccC-CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999886542 1111100 000 00 111111111 1112222221
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.||+++++ +.+.+.||+.+...
T Consensus 119 ------~~~i~h~dl~p~ni~~~~~-~~~kl~d~~~~~~~ 151 (256)
T cd08221 119 ------KAGILHRDIKTLNIFLTKA-GLIKLGDFGISKIL 151 (256)
T ss_pred ------hCCccccCCChHhEEEeCC-CCEEECcCcceEEc
Confidence 2258999999999999986 78999999977643
No 237
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=97.37 E-value=0.00088 Score=60.21 Aligned_cols=136 Identities=17% Similarity=0.254 Sum_probs=80.9
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccc------hHHHHHHHHHHhcCCCCceeEEEeCC----c
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFD------RNDEIRTFEFMSKHGQGPRLLGRFHN----G 109 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~d------r~~E~~~l~~l~~~gl~P~~~~~~~~----g 109 (359)
.++.++.|.-.+|-+|+... .+.-|-+|+-... .+++ ...|..+|+.+. +-..-++++.+.+ +
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~----~g~yYAmKvL~k~--~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKH----SGNYYAMKVLDKQ--KVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred heeeeccCccceEEEEEEcc----CCceeehhhcCHH--HHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEE
Confidence 35667778889999998653 2577778876543 1221 235777776554 3333456666654 3
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
+||+|++|-.+- ..|++.+..+.+ ..++.. .++--.++.|
T Consensus 121 mvmeyv~GGElF--------------S~Lrk~~rF~e~----------~arFYA----------------AeivlAleyl 160 (355)
T KOG0616|consen 121 MVMEYVPGGELF--------------SYLRKSGRFSEP----------HARFYA----------------AEIVLALEYL 160 (355)
T ss_pred EEEeccCCccHH--------------HHHHhcCCCCch----------hHHHHH----------------HHHHHHHHHH
Confidence 899999985432 223333322111 111111 1111112222
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
....++++||+|.|||++.+ |-+.++||.+|..
T Consensus 161 --------H~~~iiYRDLKPENiLlD~~-G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 161 --------HSLDIIYRDLKPENLLLDQN-GHIKITDFGFAKR 193 (355)
T ss_pred --------HhcCeeeccCChHHeeeccC-CcEEEEeccceEE
Confidence 23478999999999999986 7899999998753
No 238
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.37 E-value=0.0019 Score=58.18 Aligned_cols=31 Identities=32% Similarity=0.475 Sum_probs=27.4
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|++|.||+++.+ +.+.++||..+..
T Consensus 133 ~~i~H~dl~~~nil~~~~-~~~~l~dfg~~~~ 163 (269)
T cd08528 133 KRIVHRDLTPNNIMLGED-DKVTITDFGLAKQ 163 (269)
T ss_pred CceeecCCCHHHEEECCC-CcEEEecccceee
Confidence 368999999999999986 7899999998865
No 239
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.37 E-value=0.002 Score=58.84 Aligned_cols=137 Identities=17% Similarity=0.143 Sum_probs=77.8
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
.+..++.|....+|++.... .+..+++|........ ......|..+++.+...++. +++....+ .+|+|
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKL----TGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIV-TLHDIIHTKKTLTLVFE 83 (291)
T ss_pred EEEEEeecCCeEEEEEEEcC----CCcEEEEEEEecccccCCchhHHHHHHHHhhCCCccee-eEEEEEecCCeEEEEEe
Confidence 45667778888999997542 3678999987543211 11123588888888654443 34443322 27899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++| .+. . .+. .... +.....+..+.. .+.+.+..|.
T Consensus 84 ~~~~-~L~----------~----~~~---~~~~-----~~~~~~~~~~~~-----------------ql~~al~~lH--- 120 (291)
T cd07844 84 YLDT-DLK----------Q----YMD---DCGG-----GLSMHNVRLFLF-----------------QLLRGLAYCH--- 120 (291)
T ss_pred cCCC-CHH----------H----HHH---hCCC-----CCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 9865 221 0 111 1100 000111222221 1222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 121 -----~~~i~H~dl~p~nil~~~~-~~~kl~dfg~~~ 151 (291)
T cd07844 121 -----QRRVLHRDLKPQNLLISER-GELKLADFGLAR 151 (291)
T ss_pred -----hCCeecccCCHHHEEEcCC-CCEEECcccccc
Confidence 2268999999999999986 789999998764
No 240
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.37 E-value=0.00051 Score=61.29 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=77.9
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e 113 (359)
.+.++.|....+|++.... .+..+++|...... ........|..+++.+...++. +++.... + .+|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~-~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKS----DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIV-TFFASFQENGRLFIVME 79 (257)
T ss_pred EEEecCCCcceEEEEEEcC----CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChh-hhhheeccCCeEEEEEe
Confidence 3557777888999987643 36778888875321 1111123677777777544443 3343332 2 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. .+.+.+.... .......|..+ +.+.+..+.
T Consensus 80 ~~~~~~L~~--------------~~~~~~~~~~-------~~~~~~~~~~~-----------------l~~~l~~lh--- 118 (257)
T cd08225 80 YCDGGDLMK--------------RINRQRGVLF-------SEDQILSWFVQ-----------------ISLGLKHIH--- 118 (257)
T ss_pred cCCCCcHHH--------------HHHhccCCCC-------CHHHHHHHHHH-----------------HHHHHHHHH---
Confidence 998865531 1111111100 01112222211 112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.||++++++..+.++||..+...
T Consensus 119 -----~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (257)
T cd08225 119 -----DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152 (257)
T ss_pred -----HCCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence 2368999999999999876445689999877643
No 241
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.36 E-value=0.0025 Score=56.85 Aligned_cols=136 Identities=21% Similarity=0.211 Sum_probs=76.2
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeec
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFIN 116 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~ 116 (359)
.+.++.|....+|++... .+..+.+|..........+...|.++++.+....+. +++..... .++++|++
T Consensus 9 ~~~ig~g~~g~v~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWL-----EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLV-QLYGVCTERSPICLVFEFME 82 (256)
T ss_pred EeeecCcccceEEEEEEe-----CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCee-eEEEEEccCCceEEEEEcCC
Confidence 355677777899998653 256788888654321111224678888877554433 34444332 37899998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+.. . + +... . +.....+..+.. .+...+..+.
T Consensus 83 ~~~L~~-------~-------~---~~~~--~---~~~~~~~~~~~~-----------------~l~~~l~~lH------ 117 (256)
T cd05112 83 HGCLSD-------Y-------L---RAQR--G---KFSQETLLGMCL-----------------DVCEGMAYLE------ 117 (256)
T ss_pred CCcHHH-------H-------H---HhCc--c---CCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865420 1 1 1100 0 000111111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|+||+++.+ +.+.++||+.+.
T Consensus 118 --~~~i~h~dl~p~ni~i~~~-~~~~l~d~g~~~ 148 (256)
T cd05112 118 --SSNVIHRDLAARNCLVGEN-QVVKVSDFGMTR 148 (256)
T ss_pred --HCCccccccccceEEEcCC-CeEEECCCccee
Confidence 2258999999999999875 678999998765
No 242
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.36 E-value=0.0029 Score=56.41 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=26.6
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|||++|.||+++++ +.+.++||..+..
T Consensus 122 ~i~H~di~p~nil~~~~-~~~~l~df~~~~~ 151 (257)
T cd08223 122 HILHRDLKTQNVFLTRT-NIIKVGDLGIARV 151 (257)
T ss_pred CeeccCCCchhEEEecC-CcEEEecccceEE
Confidence 68999999999999986 7899999998754
No 243
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.36 E-value=0.00042 Score=62.64 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=77.5
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---c-ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---V-FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
.+.++.|....+|++.... .+..+++|+...... . ......|..+++.+..+.-.++++..+.+ .+++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKE----TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred eeeecCCCceEEEEEEEcC----CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 3567778888999997642 368899998764210 0 11123566677666523223444433322 3789
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||.+|.++.. .+.+-+ .. . ......+.. .+...+..|.
T Consensus 82 e~~~~~~L~~--------------~l~~~~--~l------~-~~~~~~i~~-----------------ql~~~l~~Lh-- 119 (280)
T cd05581 82 EYAPNGELLQ--------------YIRKYG--SL------D-EKCTRFYAA-----------------EILLALEYLH-- 119 (280)
T ss_pred cCCCCCcHHH--------------HHHHcC--CC------C-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9988865421 111111 00 0 111111111 1112222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||+.+..
T Consensus 120 ------~~~~~H~dl~~~ni~i~~~-~~~~l~df~~~~~ 151 (280)
T cd05581 120 ------SKGIIHRDLKPENILLDKD-MHIKITDFGTAKV 151 (280)
T ss_pred ------HCCeeecCCCHHHeEECCC-CCEEecCCccccc
Confidence 2368999999999999886 7899999997763
No 244
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.35 E-value=0.00069 Score=61.04 Aligned_cols=135 Identities=15% Similarity=0.127 Sum_probs=75.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc------cccchHHHHHHHHHHhcCCCCceeEEEe--C--C--c
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE------VFFDRNDEIRTFEFMSKHGQGPRLLGRF--H--N--G 109 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~------~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~--g 109 (359)
+.++.|....+|++.... .+..+++|....... .......|..+++.+...++.+ ++... . + .
T Consensus 8 ~~lg~g~~g~vy~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~~ 82 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVD----TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ-YYGCLRDRAEKTLT 82 (266)
T ss_pred ceecCCCCEEEEEEEEcC----CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeee-EEEEEEcCCCCEEE
Confidence 556777788999997542 367888887643211 1112245777888776545544 33332 1 1 2
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
+++||++|.++.. . +. .... .. ......+.. .+...+..|
T Consensus 83 l~~e~~~~~~L~~-------~-------l~---~~~~-----l~-~~~~~~~~~-----------------qi~~~l~~L 122 (266)
T cd06651 83 IFMEYMPGGSVKD-------Q-------LK---AYGA-----LT-ESVTRKYTR-----------------QILEGMSYL 122 (266)
T ss_pred EEEeCCCCCcHHH-------H-------HH---HcCC-----CC-HHHHHHHHH-----------------HHHHHHHHH
Confidence 6889988766531 1 11 1000 00 011111111 122222222
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
. ...++|+|++|.||+++++ +.+.|.||+.+.
T Consensus 123 H--------~~~i~H~~l~p~nil~~~~-~~~~l~dfg~~~ 154 (266)
T cd06651 123 H--------SNMIVHRDIKGANILRDSA-GNVKLGDFGASK 154 (266)
T ss_pred H--------hCCeeeCCCCHHHEEECCC-CCEEEccCCCcc
Confidence 1 2358999999999999876 789999998765
No 245
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.35 E-value=0.0016 Score=59.97 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=47.7
Q ss_pred EEecCCcceeEEEEEeCCC---CCCCCcEEEEEEeCCCc--ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 42 IPVKGAMTNEVFQIKWLTK---TETFSHKVLLRVYGEGV--EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~---~~~~~~~~vlRi~~~~~--~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
+.|+.|....+|++..... ....+..+++|+..... ....+...|..+++.+..+.-..+++..... .+++
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 100 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 100 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEE
Confidence 6677788899998864211 01123468888875431 1112234688888887555445555554432 3899
Q ss_pred EeecCCCC
Q 018207 113 EFINARTL 120 (359)
Q Consensus 113 e~i~G~~l 120 (359)
||++|.+|
T Consensus 101 e~~~~~~L 108 (304)
T cd05101 101 EYASKGNL 108 (304)
T ss_pred ecCCCCcH
Confidence 99988654
No 246
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.35 E-value=0.0022 Score=58.29 Aligned_cols=142 Identities=12% Similarity=0.124 Sum_probs=78.4
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEe--C--C--ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRF--H--N--GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~--g~v 111 (359)
.++.|+.|....+|.+.........+..+++|+...... .......|..+++.+...++. +++... . . .++
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV-KYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEe-eEEEEEecCCCceEEEE
Confidence 446677788888987653211112356788898754321 111123577788777544443 344432 1 1 278
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|.++.. .. +.... . ...+..+.. .+...+..|.
T Consensus 87 ~e~~~~~~l~~-------~~----------~~~~l------~-~~~~~~i~~-----------------~l~~~l~~lH- 124 (283)
T cd05080 87 MEYVPLGSLRD-------YL----------PKHKL------N-LAQLLLFAQ-----------------QICEGMAYLH- 124 (283)
T ss_pred ecCCCCCCHHH-------HH----------HHcCC------C-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998865431 11 00000 0 111111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|++|.||+++++ +.+.+.||+.+...
T Consensus 125 -------~~~i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~ 157 (283)
T cd05080 125 -------SQHYIHRDLAARNVLLDND-RLVKIGDFGLAKAV 157 (283)
T ss_pred -------HCCeeccccChheEEEcCC-CcEEEeeccccccc
Confidence 2268999999999999886 78899999987643
No 247
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.34 E-value=0.003 Score=56.50 Aligned_cols=138 Identities=15% Similarity=0.124 Sum_probs=75.2
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC---ceEEEeecC
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN---GRVEEFINA 117 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~---g~v~e~i~G 117 (359)
.|+.|....+|+......+ ..+..+++|........ ......|..+++.+...++ .+++....+ .++++|++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~v~e~~~~ 79 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKS-GKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCI-VRLIGVCKGEPLMLVMELAPL 79 (257)
T ss_pred ccCccCceeEEEeEeeccC-CCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCe-eeEEEEEcCCceEEEEEeCCC
Confidence 3566777889887643221 12367888987644321 1112356677766654333 334444432 378999887
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCC
Q 018207 118 RTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRND 197 (359)
Q Consensus 118 ~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 197 (359)
.++. ..+.+-+ .. + ...+..+.. .+...+..|.
T Consensus 80 ~~L~--------------~~l~~~~--~~-----~--~~~~~~~~~-----------------qi~~~l~~lh------- 112 (257)
T cd05060 80 GPLL--------------KYLKKRR--EI-----P--VSDLKELAH-----------------QVAMGMAYLE------- 112 (257)
T ss_pred CcHH--------------HHHHhCC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHh-------
Confidence 6542 1111111 00 0 111111211 1112222221
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||+.+..
T Consensus 113 -~~~i~H~di~p~nili~~~-~~~kl~df~~~~~ 144 (257)
T cd05060 113 -SKHFVHRDLAARNVLLVNR-HQAKISDFGMSRA 144 (257)
T ss_pred -hcCeeccCcccceEEEcCC-CcEEeccccccce
Confidence 2358999999999999986 7899999987764
No 248
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.00084 Score=61.84 Aligned_cols=32 Identities=28% Similarity=0.578 Sum_probs=29.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..+||+|++|.|+|+|.+++.+.|-||.-|..
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 58999999999999999988899999988764
No 249
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.34 E-value=0.0013 Score=61.27 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.|||++++ +.+.|+||..+..
T Consensus 116 givH~dikp~NIll~~~-~~~kl~Dfg~~~~ 145 (323)
T cd05575 116 NIIYRDLKPENILLDSQ-GHVVLTDFGLCKE 145 (323)
T ss_pred CeEeCCCCHHHeEECCC-CcEEEeccCCCcc
Confidence 69999999999999886 7899999987653
No 250
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.34 E-value=0.0016 Score=60.01 Aligned_cols=29 Identities=28% Similarity=0.513 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.|.||..+.
T Consensus 158 ~ivH~dlkp~Nill~~~-~~~kl~DfG~~~ 186 (304)
T cd05096 158 NFVHRDLATRNCLVGEN-LTIKIADFGMSR 186 (304)
T ss_pred CccccCcchhheEEcCC-ccEEECCCccce
Confidence 58999999999999986 789999998775
No 251
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.34 E-value=0.0012 Score=60.15 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=74.7
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-cc-ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EV-FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i 115 (359)
+.|+.|....+|++.... .+..+++|...... .. .....+|..+++.+....+ ++++... .+ .+++||+
T Consensus 7 ~~ig~g~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 7 DELGKGNYGSVYKVLHRP----TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYI-VDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhcccCCeEEEEEEEcC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcH-HhhhhheecCCeEEEEEeec
Confidence 456778888999997642 36788888764321 11 1112357777776643333 2333322 22 3799999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.++.. + + +.... .. ......+..+.. .+...+..|.
T Consensus 82 ~~~~l~~-------~-------~---~~~~~-~~--~~~~~~~~~~~~-----------------~i~~~l~~LH----- 119 (286)
T cd06622 82 DAGSLDK-------L-------Y---AGGVA-TE--GIPEDVLRRITY-----------------AVVKGLKFLK----- 119 (286)
T ss_pred CCCCHHH-------H-------H---Hhccc-cC--CCCHHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 9875431 1 1 00000 00 000111111111 1112222221
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
....++|+|++|.||+++.+ +.+.++||..+.
T Consensus 120 --~~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 151 (286)
T cd06622 120 --EEHNIIHRDVKPTNVLVNGN-GQVKLCDFGVSG 151 (286)
T ss_pred --hcCCEeeCCCCHHHEEECCC-CCEEEeecCCcc
Confidence 12369999999999999985 789999998764
No 252
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.33 E-value=0.00095 Score=62.28 Aligned_cols=29 Identities=28% Similarity=0.441 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 116 giiHrDlkp~Nili~~~-~~~kl~DfG~a~ 144 (325)
T cd05602 116 NIVYRDLKPENILLDSQ-GHIVLTDFGLCK 144 (325)
T ss_pred CeEecCCCHHHeEECCC-CCEEEccCCCCc
Confidence 69999999999999886 789999998764
No 253
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.33 E-value=0.0025 Score=57.26 Aligned_cols=30 Identities=27% Similarity=0.531 Sum_probs=26.1
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|.||..+..
T Consensus 126 ~ivH~di~p~nil~~~~-~~~~l~dfg~~~~ 155 (267)
T cd06628 126 GIIHRDIKGANILVDNK-GGIKISDFGISKK 155 (267)
T ss_pred CcccccCCHHHEEEcCC-CCEEecccCCCcc
Confidence 58999999999999886 7899999987653
No 254
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.33 E-value=0.0011 Score=60.86 Aligned_cols=30 Identities=30% Similarity=0.595 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++++ +.+.|.||..+..
T Consensus 136 ~i~H~dl~p~nili~~~-~~~kl~dfg~~~~ 165 (302)
T cd07864 136 NFLHRDIKCSNILLNNK-GQIKLADFGLARL 165 (302)
T ss_pred CeecCCCCHHHEEECCC-CcEEeCccccccc
Confidence 68999999999999986 7889999987764
No 255
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.33 E-value=0.0025 Score=57.31 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=75.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e 113 (359)
+.++.|..+.+|++.... .+..+++|...... ....+...|..+++.+...++. +++... .+ .+++|
T Consensus 8 ~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 8 KKIGRGQFSEVYRATCLL----DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVI-KYLDSFIEDNELNIVLE 82 (267)
T ss_pred eeeccCCCeeEEEEEEeC----CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCccee-eeeeeEEECCeEEEEEE
Confidence 456778888999997542 36788888654211 1111224577777766544433 333332 22 38899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++. .+...+.. .. .......+..+.. .+...+..|.
T Consensus 83 ~~~~~~L~-----------~~~~~~~~-------~~-~~~~~~~~~~~~~-----------------~i~~~l~~LH--- 123 (267)
T cd08228 83 LADAGDLS-----------QMIKYFKK-------QK-RLIPERTVWKYFV-----------------QLCSAVEHMH--- 123 (267)
T ss_pred ecCCCcHH-----------HHHHHhhh-------cc-CCCCHHHHHHHHH-----------------HHHHHHHHHh---
Confidence 99886542 11111100 00 0000111111111 1111222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||+.+..
T Consensus 124 -----~~~i~H~dl~~~nil~~~~-~~~~l~d~g~~~~ 155 (267)
T cd08228 124 -----SRRVMHRDIKPANVFITAT-GVVKLGDLGLGRF 155 (267)
T ss_pred -----hCCeeCCCCCHHHEEEcCC-CCEEECcccccee
Confidence 2378999999999999886 7899999997764
No 256
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.33 E-value=0.0031 Score=57.47 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=26.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 130 ~iiH~dlkp~Nil~~~~-~~~kl~Dfg~~~~ 159 (290)
T cd07862 130 RVVHRDLKPQNILVTSS-GQIKLADFGLARI 159 (290)
T ss_pred CeeeCCCCHHHEEEcCC-CCEEEccccceEe
Confidence 68999999999999986 7899999987753
No 257
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.32 E-value=0.00082 Score=63.51 Aligned_cols=30 Identities=27% Similarity=0.524 Sum_probs=26.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++++ +.+.|+||..+..
T Consensus 139 givHrDikp~Nill~~~-~~~kl~Dfg~~~~ 168 (355)
T cd07874 139 GIIHRDLKPSNIVVKSD-CTLKILDFGLART 168 (355)
T ss_pred CcccCCCChHHEEECCC-CCEEEeeCccccc
Confidence 68999999999999886 7899999998764
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.32 E-value=0.0018 Score=58.00 Aligned_cols=139 Identities=16% Similarity=0.161 Sum_probs=77.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-cc-ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
.+.++.|....+|++.... .+..+++|+..... .. ..+...|...++.+....+ ++++.... + .+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 6 IEVIGVGATAVVYAAICLP----NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-VKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred eeeecCCCCeEEEEEEEcC----CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-EEEEEEEeeCCEEEEEEec
Confidence 3556677788999997643 36788899876432 11 1223467777766654333 33443332 2 378999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++. ..+...+. .. ......+..+.. .+...+..|.
T Consensus 81 ~~~~~l~--------------~~~~~~~~---~~---~~~~~~~~~~~~-----------------ql~~al~~lh---- 119 (267)
T cd06610 81 LSGGSLL--------------DIMKSSYP---RG---GLDEAIIATVLK-----------------EVLKGLEYLH---- 119 (267)
T ss_pred cCCCcHH--------------HHHHHhcc---cC---CCCHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9886542 11111111 00 000111111211 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 120 ----~~~i~h~~l~p~ni~~~~~-~~~~l~df~~~~ 150 (267)
T cd06610 120 ----SNGQIHRDIKAGNILLGED-GSVKIADFGVSA 150 (267)
T ss_pred ----hCCeecCCCCHHhEEEcCC-CCEEEcccchHH
Confidence 2368999999999999986 789999998764
No 259
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.31 E-value=0.0023 Score=57.55 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=76.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i 115 (359)
.+.++.|....+|++.... .+..+++|+...... .......|..+++.+...++. +++... .+ .+++||+
T Consensus 14 ~~~lg~g~~g~vy~~~~~~----~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii-~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLH----TGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIV-AYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hheeecCCCeEEEEEEECC----CCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCee-eeeEEEEeCCEEEEEEeCC
Confidence 3566778888999997542 357788888754321 111123577777666544443 333332 22 3789998
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.++.. . +|... +. + ......+.. .+.+.+..+.
T Consensus 89 ~~~~L~~-------~----------~~~~~-~~---~--~~~~~~~~~-----------------qi~~~l~~lH----- 123 (267)
T cd06646 89 GGGSLQD-------I----------YHVTG-PL---S--ELQIAYVCR-----------------ETLQGLAYLH----- 123 (267)
T ss_pred CCCcHHH-------H----------HHhcC-CC---C--HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8765431 1 11100 00 0 111111111 1112222221
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||..+..
T Consensus 124 ---~~~i~H~dl~p~nill~~~-~~~~l~dfg~~~~ 155 (267)
T cd06646 124 ---SKGKMHRDIKGANILLTDN-GDVKLADFGVAAK 155 (267)
T ss_pred ---HCCccccCCCHHHEEECCC-CCEEECcCcccee
Confidence 2368999999999999876 6799999998764
No 260
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.31 E-value=0.00086 Score=61.60 Aligned_cols=134 Identities=16% Similarity=0.187 Sum_probs=75.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-cchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-FDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i~ 116 (359)
+.++.|..+.+|+..... .+..+++|......... .....|..+++.+...++ ++++... .+ .+++||++
T Consensus 26 ~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 26 IKIGEGSTGIVCIATVKS----SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-VEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred HHcCCCCCeEEEEEEEcC----CCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcch-hheeeEEEeCCEEEEEEecCC
Confidence 457778888999987542 36788888764332111 112356777776654333 3343332 22 38999999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. . +. + ... . ......+.. .+...+..+.
T Consensus 101 ~~~L~~-------~-------~~--~-~~~------~-~~~~~~~~~-----------------ql~~~l~~lH------ 133 (292)
T cd06657 101 GGALTD-------I-------VT--H-TRM------N-EEQIAAVCL-----------------AVLKALSVLH------ 133 (292)
T ss_pred CCcHHH-------H-------Hh--c-CCC------C-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 876531 1 10 0 000 0 111111111 1112222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|||++|.||+++++ +.+.++||+.+.
T Consensus 134 --~~givH~dl~p~Nilv~~~-~~~~l~dfg~~~ 164 (292)
T cd06657 134 --AQGVIHRDIKSDSILLTHD-GRVKLSDFGFCA 164 (292)
T ss_pred --HCCeecCCCCHHHEEECCC-CCEEEcccccce
Confidence 1268999999999999986 679999999764
No 261
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.31 E-value=0.0014 Score=59.57 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=77.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--------C--ceE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--------N--GRV 111 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--------~--g~v 111 (359)
+.++.|....+|++.... .+..+.+|+.............|..+++.+..+.-..+++..+. + .++
T Consensus 22 ~~lg~g~~~~v~~~~~~~----~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 97 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVK----TGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLV 97 (282)
T ss_pred eeeccCCCeEEEEEEEcC----CCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEE
Confidence 567778889999987642 36788899875432211122456677776655443444444331 1 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||++|.++.. ... . +. ....+ ...+..+.. .+...+..|.
T Consensus 98 ~e~~~~~~L~~-------~~~-------~-~~----~~~~~--~~~~~~~~~-----------------qi~~al~~LH- 138 (282)
T cd06636 98 MEFCGAGSVTD-------LVK-------N-TK----GNALK--EDWIAYICR-----------------EILRGLAHLH- 138 (282)
T ss_pred EEeCCCCcHHH-------HHH-------H-cc----CCCCC--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998865431 111 0 00 00000 011111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 139 -------~~~ivH~dl~~~nili~~~-~~~~l~dfg~~~~ 170 (282)
T cd06636 139 -------AHKVIHRDIKGQNVLLTEN-AEVKLVDFGVSAQ 170 (282)
T ss_pred -------HCCcccCCCCHHHEEECCC-CCEEEeeCcchhh
Confidence 2368999999999999986 7899999987653
No 262
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.30 E-value=0.003 Score=56.57 Aligned_cols=137 Identities=18% Similarity=0.200 Sum_probs=74.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEeec
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFIN 116 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i~ 116 (359)
.+.++.|....+|...... +..+.+|..........+-..|..+++.+...++ ++++..... .+++||++
T Consensus 9 ~~~lg~G~~~~vy~~~~~~-----~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRG-----QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL-VQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred eeEecCcccceEEEEEecC-----CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCe-eeEEEEEccCCCcEEEEEcCC
Confidence 4567778888999987531 3457888765432111112357777766653333 455554432 38899988
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+.. . + +..... .. ...+..+.. .+...+..+.
T Consensus 83 ~~~l~~-------~-------i---~~~~~~----~~-~~~~~~~~~-----------------~i~~~l~~lH------ 117 (256)
T cd05113 83 NGCLLN-------Y-------L---REHGKR----FQ-PSQLLEMCK-----------------DVCEGMAYLE------ 117 (256)
T ss_pred CCcHHH-------H-------H---HhcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 755421 1 1 110000 00 111111111 1112222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 118 --~~~i~H~dl~p~nili~~~-~~~kl~d~g~~~~ 149 (256)
T cd05113 118 --SKQFIHRDLAARNCLVDDQ-GCVKVSDFGLSRY 149 (256)
T ss_pred --hCCeeccccCcceEEEcCC-CCEEECCCcccee
Confidence 2368999999999999886 7899999987653
No 263
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.30 E-value=0.0046 Score=55.87 Aligned_cols=133 Identities=15% Similarity=0.146 Sum_probs=75.6
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeecCC
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFINAR 118 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~G~ 118 (359)
.++.|....+|++.... .+..+++|+....... ..|....+.+.++.-.++++..+. + .+|+||++|.
T Consensus 23 ~lg~g~~g~v~~~~~~~----~~~~~~~k~~~~~~~~----~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 94 (267)
T PHA03390 23 KLIDGKFGKVSVLKHKP----TQKLFVQKIIKAKNFN----AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDG 94 (267)
T ss_pred eecCCCceEEEEEEEcC----CCcEEEEEEEehhhcc----hhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCC
Confidence 37888889999997643 3678999997643111 124444444444444556665543 2 3899999886
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCC
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQ 198 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 198 (359)
+|.. . +. ... +-....+..+..+ +.+.+..+.
T Consensus 95 ~L~~-------~-------l~---~~~------~l~~~~~~~~~~q-----------------i~~~l~~lH-------- 126 (267)
T PHA03390 95 DLFD-------L-------LK---KEG------KLSEAEVKKIIRQ-----------------LVEALNDLH-------- 126 (267)
T ss_pred cHHH-------H-------HH---hcC------CCCHHHHHHHHHH-----------------HHHHHHHHH--------
Confidence 5421 1 10 100 0001122222211 112222222
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+++.+.++||+.+..
T Consensus 127 ~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~ 159 (267)
T PHA03390 127 KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI 159 (267)
T ss_pred hCCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence 125899999999999998733799999987653
No 264
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.30 E-value=0.0013 Score=58.78 Aligned_cols=31 Identities=32% Similarity=0.558 Sum_probs=27.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
.++|+|++|.||+++++ +.+.++||..+...
T Consensus 113 ~i~H~di~~~nil~~~~-~~~~l~dfg~~~~~ 143 (265)
T cd05579 113 GIIHRDLKPDNILIDSN-GHLKLTDFGLSKVG 143 (265)
T ss_pred CeecCCCCHHHeEEcCC-CCEEEEecccchhc
Confidence 68999999999999986 78999999876643
No 265
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.29 E-value=0.0038 Score=56.97 Aligned_cols=136 Identities=13% Similarity=0.152 Sum_probs=76.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccccc-chHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFF-DRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEF 114 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~ 114 (359)
..+.|+.|....+|++.... .+..+++|.......... ....|..+++.+...++. +++... .+ ..+++|
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv-~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 23 NFVKIGEGSTGIVCIATDKS----TGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV-EMYSSYLVGDELWVVMEF 97 (285)
T ss_pred cceEeccCCCeEEEEEEECC----CCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChh-eEEEEEEcCCeEEEEEec
Confidence 46788889899999987532 357888887643211100 113466666665543333 343332 22 388999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. .+.+ + .. . ...+..+.. .+...+..+.
T Consensus 98 ~~~~~L~~--------------~~~~-~--~~------~-~~~~~~~~~-----------------ql~~~l~~lH---- 132 (285)
T cd06648 98 LEGGALTD--------------IVTH-T--RM------N-EEQIATVCL-----------------AVLKALSFLH---- 132 (285)
T ss_pred cCCCCHHH--------------HHHh-C--CC------C-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865431 1111 0 00 0 111111211 1112222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 133 ----~~~i~H~dl~p~Nil~~~~-~~~~l~d~g~~~ 163 (285)
T cd06648 133 ----AQGVIHRDIKSDSILLTSD-GRVKLSDFGFCA 163 (285)
T ss_pred ----hCCeecCCCChhhEEEcCC-CcEEEcccccch
Confidence 2368999999999999986 789999998654
No 266
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.29 E-value=0.0032 Score=58.37 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=46.8
Q ss_pred EEEecCCcceeEEEEEeCCCC---CCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKT---ETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~---~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
.+.++.|....+|++...... ......+.+|+...... ...+...|..+++.+..+.-..+++..+.. .++
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVI 96 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEE
Confidence 466777888999998642110 01235677888654321 111224577777766544444556654432 378
Q ss_pred EEeecCCCC
Q 018207 112 EEFINARTL 120 (359)
Q Consensus 112 ~e~i~G~~l 120 (359)
+||++|.+|
T Consensus 97 ~e~~~~g~L 105 (314)
T cd05099 97 VEYAAKGNL 105 (314)
T ss_pred EecCCCCcH
Confidence 999988765
No 267
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.29 E-value=0.0013 Score=59.43 Aligned_cols=30 Identities=27% Similarity=0.420 Sum_probs=26.5
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++++ +.+.++||..+.
T Consensus 131 ~~i~H~dikp~nili~~~-~~~kl~dfgl~~ 160 (270)
T cd05047 131 KQFIHRDLAARNILVGEN-YVAKIADFGLSR 160 (270)
T ss_pred CCEeecccccceEEEcCC-CeEEECCCCCcc
Confidence 478999999999999986 788899999764
No 268
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.29 E-value=0.0021 Score=57.80 Aligned_cols=139 Identities=17% Similarity=0.164 Sum_probs=75.5
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--c--cccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--E--VFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e 113 (359)
+.|+.|....+|++.... ++..+++|...... . ...+...|..+++.+...++.+ ++..+ .+ ..+++
T Consensus 8 ~~ig~g~~g~v~~~~~~~----~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~~v~e 82 (267)
T cd08229 8 KKIGRGQFSEVYRATCLL----DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK-YYASFIEDNELNIVLE 82 (267)
T ss_pred hhhcccCCeEEEEEeecC----CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhh-hhheeEeCCeEEEEEE
Confidence 446677788999987542 36788888654321 1 1111235777777665444433 33222 22 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. .+...... .. .........+.. .+.+.+..|.
T Consensus 83 ~~~~~~L~~--------------~~~~~~~~---~~--~~~~~~~~~~~~-----------------~i~~~l~~LH--- 123 (267)
T cd08229 83 LADAGDLSR--------------MIKHFKKQ---KR--LIPEKTVWKYFV-----------------QLCSALEHMH--- 123 (267)
T ss_pred ecCCCCHHH--------------HHHHhhcc---CC--CCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998876531 11111100 00 000111111111 1222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.+.||..+.
T Consensus 124 -----~~~i~H~dl~p~nili~~~-~~~~l~dfg~~~ 154 (267)
T cd08229 124 -----SRRVMHRDIKPANVFITAT-GVVKLGDLGLGR 154 (267)
T ss_pred -----HCCeecCCCCHHHEEEcCC-CCEEECcchhhh
Confidence 2368999999999999886 789999998654
No 269
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.29 E-value=0.0016 Score=58.35 Aligned_cols=136 Identities=18% Similarity=0.219 Sum_probs=77.7
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc---cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE---VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~---~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
+.|+.|....+|++.... .+..+++|+...... .......|..+++.+...++ .+++..+.+ .+++||
T Consensus 6 ~~lg~G~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLD----TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL-VKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred eEeecCCCcEEEEEEECC----CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh-hheeeeEecCCEEEEEEec
Confidence 567778888999987542 367889998764422 11122457777777654433 344444322 378999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. . + +.... .. ......+.. .+...+..|.
T Consensus 81 ~~~~~L~~-------~-------~---~~~~~-----~~-~~~~~~i~~-----------------~i~~~l~~lh---- 116 (264)
T cd06626 81 CSGGTLEE-------L-------L---EHGRI-----LD-EHVIRVYTL-----------------QLLEGLAYLH---- 116 (264)
T ss_pred CCCCcHHH-------H-------H---hhcCC-----CC-hHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865531 1 1 11000 00 111111111 1112222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.|.||..+..
T Consensus 117 ----~~~i~H~dl~~~nil~~~~-~~~kl~d~g~~~~ 148 (264)
T cd06626 117 ----SHGIVHRDIKPANIFLDHN-GVIKLGDFGCAVK 148 (264)
T ss_pred ----HCCcccCCCCHHHEEECCC-CCEEEcccccccc
Confidence 2258999999999999985 7899999987765
No 270
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.28 E-value=0.0026 Score=60.31 Aligned_cols=133 Identities=16% Similarity=0.113 Sum_probs=75.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEee
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFI 115 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i 115 (359)
-++.|+.|....+|++.... .+..+++|+...... ..|..+++.+...++. +++.... + .+|++++
T Consensus 70 ~~~~lg~G~~g~Vy~~~~~~----~~~~valK~~~~~~~-----~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 70 VIKTLTPGSEGRVFVATKPG----QPDPVVLKIGQKGTT-----LIEAMLLQNVNHPSVI-RMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred EEEEecCCCCeEEEEEEECC----CCceEEEEeCCcccc-----HHHHHHHHhCCCCCCc-ChhheEEeCCeeEEEEEcc
Confidence 45677888889999997642 357888998543221 2588888877654443 3443332 2 3678877
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
.|.- ... +. .... +........+.. .+...+..|.
T Consensus 140 ~~~l-----------~~~----l~---~~~~-----~~~~~~~~~i~~-----------------qi~~aL~~LH----- 174 (357)
T PHA03209 140 SSDL-----------YTY----LT---KRSR-----PLPIDQALIIEK-----------------QILEGLRYLH----- 174 (357)
T ss_pred CCcH-----------HHH----HH---hccC-----CCCHHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 5521 111 11 0000 000111111111 1222222222
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.|||++.+ +.+.|+||..+..
T Consensus 175 ---~~~ivHrDlkp~Nill~~~-~~~kl~DfG~a~~ 206 (357)
T PHA03209 175 ---AQRIIHRDVKTENIFINDV-DQVCIGDLGAAQF 206 (357)
T ss_pred ---HCCeecCCCCHHHEEECCC-CCEEEecCccccc
Confidence 2268999999999999886 7899999998763
No 271
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.28 E-value=0.0041 Score=56.79 Aligned_cols=137 Identities=15% Similarity=0.107 Sum_probs=76.3
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-c-ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-V-FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
-.+.|+.|..+.+|++.... .+..+++|+...... . .....+|..+++.+...++ ++++....+ .+|+|
T Consensus 9 ~~~~ig~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 9 NLEKLGEGSYATVYKGISRI----NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI-VLLHDIIHTKETLTFVFE 83 (291)
T ss_pred EEEEEEecCCEEEEEEEEcC----CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCE-eEEEEEEecCCeEEEEEe
Confidence 45677788889999987542 367899998754321 1 1122467777777754443 344443322 27888
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|..+ .. +..... . .+ ...+..+.. ++...+..|.
T Consensus 84 ~~~~~l~-----------~~-------~~~~~~--~-~~--~~~~~~~~~-----------------qi~~~L~~lH--- 120 (291)
T cd07870 84 YMHTDLA-----------QY-------MIQHPG--G-LH--PYNVRLFMF-----------------QLLRGLAYIH--- 120 (291)
T ss_pred cccCCHH-----------HH-------HHhCCC--C-CC--HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 8865211 00 000000 0 00 111111111 1111222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 121 -----~~~i~H~dlkp~Nil~~~~-~~~~l~Dfg~~~ 151 (291)
T cd07870 121 -----GQHILHRDLKPQNLLISYL-GELKLADFGLAR 151 (291)
T ss_pred -----hCCcccCCCChHHEEEcCC-CcEEEecccccc
Confidence 2368999999999999886 789999999765
No 272
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.28 E-value=0.0047 Score=55.67 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=77.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc----------c-chHHHHHHHHHHhcCCCCceeEEEeCC-
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF----------F-DRNDEIRTFEFMSKHGQGPRLLGRFHN- 108 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~----------~-dr~~E~~~l~~l~~~gl~P~~~~~~~~- 108 (359)
.+.++.|....+|+..... .+..+++|......... . ....|..+++.+...+ .++++.....
T Consensus 6 ~~~lg~g~~~~vy~~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~ 80 (272)
T cd06629 6 GELIGKGTYGRVYLALNVT----TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLN-IVQYLGFETTE 80 (272)
T ss_pred cceecccCceEEEEEeecC----CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCC-cceEEEEeccC
Confidence 3568888889999986432 36788888764321100 0 0124666666664333 4456655432
Q ss_pred ---ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHH
Q 018207 109 ---GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEE 185 (359)
Q Consensus 109 ---g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 185 (359)
.+|+||++|.++.. .+.+-. .. + ...+..+.. .+...
T Consensus 81 ~~~~lv~e~~~~~~L~~--------------~l~~~~--~l-----~--~~~~~~~~~-----------------qi~~~ 120 (272)
T cd06629 81 EYLSIFLEYVPGGSIGS--------------CLRTYG--RF-----E--EQLVRFFTE-----------------QVLEG 120 (272)
T ss_pred CceEEEEecCCCCcHHH--------------HHhhcc--CC-----C--HHHHHHHHH-----------------HHHHH
Confidence 37899999876531 111100 00 0 011111111 11112
Q ss_pred HHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 186 ISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 186 ~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
+..+. ...++|||++|+||+++++ +.+.+.||..+...
T Consensus 121 l~~lH--------~~~i~H~dl~~~nil~~~~-~~~~l~d~~~~~~~ 158 (272)
T cd06629 121 LAYLH--------SKGILHRDLKADNLLVDAD-GICKISDFGISKKS 158 (272)
T ss_pred HHHHh--------hCCeeecCCChhhEEEcCC-CeEEEeeccccccc
Confidence 22221 2368999999999999986 78999999987653
No 273
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.28 E-value=0.0017 Score=60.32 Aligned_cols=30 Identities=33% Similarity=0.582 Sum_probs=26.1
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++++ +.+.++||+.+..
T Consensus 145 ~i~H~dL~p~Nil~~~~-~~~kl~dfg~~~~ 174 (317)
T cd06635 145 NMIHRDIKAGNILLTEP-GQVKLADFGSASI 174 (317)
T ss_pred CcccCCCCcccEEECCC-CCEEEecCCCccc
Confidence 68999999999999886 7899999986643
No 274
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.28 E-value=0.0016 Score=59.06 Aligned_cols=134 Identities=15% Similarity=0.058 Sum_probs=72.9
Q ss_pred cCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEeec
Q 018207 45 KGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEFIN 116 (359)
Q Consensus 45 ~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~i~ 116 (359)
+.|....+|++.... .+..+.+|+..... ........|..+++.+. +...++++..+. + .+|+||++
T Consensus 2 g~g~~g~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~ 76 (277)
T cd05577 2 GKGGFGEVCACQVKA----TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMN 76 (277)
T ss_pred CCCCceeEEEEEEcC----CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCC
Confidence 446667899987542 36788889875421 11111135777777775 333344444432 2 38999999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. .+.+-.. . +.....+..+.. .+...+..+.
T Consensus 77 ~~~L~~--------------~l~~~~~---~----~~~~~~~~~~~~-----------------ql~~~l~~lH------ 112 (277)
T cd05577 77 GGDLKY--------------HIYNVGE---P----GFPEARAIFYAA-----------------QIICGLEHLH------ 112 (277)
T ss_pred CCcHHH--------------HHHHcCc---C----CCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865531 1110000 0 000111111111 1112222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|||++|.||+++++ +.+.++||..+.
T Consensus 113 --~~~i~H~di~p~Nil~~~~-~~~~l~dfg~~~ 143 (277)
T cd05577 113 --QRRIVYRDLKPENVLLDDH-GNVRISDLGLAV 143 (277)
T ss_pred --hCCcccCCCCHHHEEECCC-CCEEEccCcchh
Confidence 2368999999999999986 789999998664
No 275
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.27 E-value=0.0026 Score=58.29 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=75.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc----ccc--hHHHHHHHHHHhcCCCCceeEEEe-CC--ceEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV----FFD--RNDEIRTFEFMSKHGQGPRLLGRF-HN--GRVE 112 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~----~~d--r~~E~~~l~~l~~~gl~P~~~~~~-~~--g~v~ 112 (359)
+.|+.|....+|++.... .+..+++|........ ... -..|..+++.+...++.+-.-... .+ .+|+
T Consensus 6 ~~lg~g~~~~vy~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 6 KKLGEGTYAVVYKARDKE----TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred eeeeeccccEEEEEEECC----CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 457778888999997542 3678999988644211 111 124677777766545544322222 22 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||+ +..+. +.+ +....+ .. ...+..+.. .+.+.+..|.
T Consensus 82 e~~-~~~L~--------------~~i---~~~~~~----~~-~~~~~~~~~-----------------qi~~al~~lH-- 119 (298)
T cd07841 82 EFM-ETDLE--------------KVI---KDKSIV----LT-PADIKSYML-----------------MTLRGLEYLH-- 119 (298)
T ss_pred ccc-CCCHH--------------HHH---hccCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 998 43321 111 111100 01 111111111 1222222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 120 ------~~~i~H~dl~p~nill~~~-~~~~l~dfg~~~~ 151 (298)
T cd07841 120 ------SNWILHRDLKPNNLLIASD-GVLKLADFGLARS 151 (298)
T ss_pred ------hCCeeecCCChhhEEEcCC-CCEEEccceeeee
Confidence 1258999999999999986 7899999987753
No 276
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.27 E-value=0.0022 Score=57.56 Aligned_cols=140 Identities=16% Similarity=0.180 Sum_probs=76.7
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--c-c-ccchHHHHHHHHHHhcCCCCceeEEEe-C-C--ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--E-V-FFDRNDEIRTFEFMSKHGQGPRLLGRF-H-N--GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~-~-~~dr~~E~~~l~~l~~~gl~P~~~~~~-~-~--g~v~e 113 (359)
+.++.|....+|++.... .+..+++|...... + . ......|..+++.+...++. +++... . + .+++|
T Consensus 8 ~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~-~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 8 KKIGKGQFSVVYKAICLL----DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVI-KYLASFIENNELNIVLE 82 (267)
T ss_pred eeeccCCceEEEEEEEcC----CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCee-eeeeeeecCCeEEEEEe
Confidence 557778888999997642 36788888764321 1 1 11123577777766544433 333222 2 2 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. . +... ..... +.....+..|.. .+.+.+..|.
T Consensus 83 ~~~~~~L~~-------~-------l~~~---~~~~~--~~~~~~~~~~~~-----------------~l~~~l~~lh--- 123 (267)
T cd08224 83 LADAGDLSR-------M-------IKHF---KKQKR--LIPERTIWKYFV-----------------QLCSALEHMH--- 123 (267)
T ss_pred cCCCCCHHH-------H-------HHHh---cccCC--CcCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998865431 1 1110 00000 001112222221 1122222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||+.+..
T Consensus 124 -----~~~i~h~dl~p~nil~~~~-~~~~l~d~~~~~~ 155 (267)
T cd08224 124 -----SKRIMHRDIKPANVFITAT-GVVKLGDLGLGRF 155 (267)
T ss_pred -----hCCEecCCcChhhEEECCC-CcEEEeccceeee
Confidence 2378999999999999886 7889999987654
No 277
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.27 E-value=0.0036 Score=58.09 Aligned_cols=143 Identities=16% Similarity=0.236 Sum_probs=76.0
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cc-cchHHHHHHHHHHhcCCCCceeEEEeCC---ceEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VF-FDRNDEIRTFEFMSKHGQGPRLLGRFHN---GRVEEF 114 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~~---g~v~e~ 114 (359)
.++.|+.|....+|++...........++.+|+...... .. .....|..+++.+....+ .++++.... ..+++|
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~g~~~~~~~~~v~e~ 89 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-CRLLGICLTSTVQLITQL 89 (316)
T ss_pred eeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCC-CeEEEEEcCCCceeeeec
Confidence 456677788899999875321100123578888754321 11 112346666666644444 345554432 378888
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
+++..+.. . ++.... ... ...+..+.. .+...++.|.
T Consensus 90 ~~~g~l~~-------~----------l~~~~~----~~~-~~~~~~~~~-----------------qi~~~L~~LH---- 126 (316)
T cd05108 90 MPFGCLLD-------Y----------VREHKD----NIG-SQYLLNWCV-----------------QIAKGMNYLE---- 126 (316)
T ss_pred CCCCCHHH-------H----------HHhccc----cCC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 87644320 0 111000 000 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 127 ----~~~iiH~dlkp~Nill~~~-~~~kl~DfG~a~~ 158 (316)
T cd05108 127 ----ERRLVHRDLAARNVLVKTP-QHVKITDFGLAKL 158 (316)
T ss_pred ----hcCeeccccchhheEecCC-CcEEEcccccccc
Confidence 2358999999999999886 7899999998763
No 278
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.27 E-value=0.0014 Score=60.16 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++++ +.+.++||..+..
T Consensus 149 ~i~H~dlkp~Nill~~~-~~~kl~dfg~~~~ 178 (295)
T cd05097 149 NFVHRDLATRNCLVGNH-YTIKIADFGMSRN 178 (295)
T ss_pred CeeccccChhhEEEcCC-CcEEecccccccc
Confidence 68999999999999876 6799999987753
No 279
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.26 E-value=0.0052 Score=56.18 Aligned_cols=138 Identities=19% Similarity=0.156 Sum_probs=75.4
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccc-cchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVF-FDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
...|+.|....+|++.... .+..+++|...... ... -....|..+++.+... -.++++....+ .+|+|
T Consensus 7 ~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRV----TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred EEEecCCCCEEEEEEEecC----CCcEEEEEehhhccccccchHHHHHHHHHHHhccCC-CEeeEEEEEecCCeEEEEEe
Confidence 4567778889999997542 36789999875331 111 1123577777777533 33445544432 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|+++. + ... +..-. ... .. ...+..+.. .+...+..|.
T Consensus 82 ~~~~~-l----------~~~----~~~~~-----~~~-~~-~~~~~~~~~-----------------qi~~aL~~LH--- 119 (294)
T PLN00009 82 YLDLD-L----------KKH----MDSSP-----DFA-KN-PRLIKTYLY-----------------QILRGIAYCH--- 119 (294)
T ss_pred ccccc-H----------HHH----HHhCC-----CCC-cC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 98542 1 111 11000 000 00 111111111 1112222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++++.+.+.||+.+.
T Consensus 120 -----~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 120 -----SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred -----hCCeeCCCCCcceEEEECCCCEEEEccccccc
Confidence 12689999999999998654678899999775
No 280
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.25 E-value=0.0048 Score=55.97 Aligned_cols=139 Identities=18% Similarity=0.160 Sum_probs=77.1
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccc-hHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFD-RNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~d-r~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
.++.++.|....+|++.... .+..+++|........ ... ...|..+++.+...+ .++++.... + .+|+|
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRT----TGEIVALKEIHLDAEEGTPSTAIREISLMKELKHEN-IVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred EeeeeccCCceEEEEEEECC----CCeEEEEEEecccccccchHHHHHHHHHHHhhcCCC-EeeeeeeEeeCCcEEEEEe
Confidence 34677788888999997642 3678889977543211 111 135788888875433 445554432 2 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++| .+. +. +. -+.... +-.......+.. .+...+..|.
T Consensus 79 ~~~~-~l~-------~~-------~~-~~~~~~-----~~~~~~~~~~~~-----------------qi~~~l~~lH--- 117 (284)
T cd07836 79 YMDK-DLK-------KY-------MD-THGVRG-----ALDPNTVKSFTY-----------------QLLKGIAFCH--- 117 (284)
T ss_pred cCCc-cHH-------HH-------HH-hcCCCC-----CcCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 9876 211 00 10 011000 000111111111 1112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.+.||..+.
T Consensus 118 -----~~~i~h~dl~p~ni~~~~~-~~~~l~d~g~~~ 148 (284)
T cd07836 118 -----ENRVLHRDLKPQNLLINKR-GELKLADFGLAR 148 (284)
T ss_pred -----HCCeeeCCCCHHHEEECCC-CcEEEeecchhh
Confidence 2268999999999999886 789999998764
No 281
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.25 E-value=0.0023 Score=61.51 Aligned_cols=134 Identities=17% Similarity=0.182 Sum_probs=74.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEee
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFI 115 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i 115 (359)
-+..|+.|....+|++..... ..+.++++|...... ...+|..+++.+....+.+ ++..+. + .+++++.
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~--~~~~~v~vK~~~~~~----~~~~E~~il~~l~h~~iv~-~~~~~~~~~~~~lv~e~~ 168 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGD--EQRKKVIVKAVTGGK----TPGREIDILKTISHRAIIN-LIHAYRWKSTVCMVMPKY 168 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCC--ccceeEEEEeccccc----cHHHHHHHHHhcCCCCccc-eeeeEeeCCEEEEEehhc
Confidence 346677888899999864321 124678888764322 2247888998886544443 443332 2 2667766
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
.|. +...+ .+-. +........+.. .+...+..|.
T Consensus 169 ~~~-----------l~~~l----~~~~---------~l~~~~~~~i~~-----------------ql~~aL~~LH----- 202 (392)
T PHA03207 169 KCD-----------LFTYV----DRSG---------PLPLEQAITIQR-----------------RLLEALAYLH----- 202 (392)
T ss_pred CCC-----------HHHHH----HhcC---------CCCHHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 441 11111 1000 000111111111 1222222222
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 203 ---~~givHrDlkp~Nill~~~-~~~~l~DfG~a~ 233 (392)
T PHA03207 203 ---GRGIIHRDVKTENIFLDEP-ENAVLGDFGAAC 233 (392)
T ss_pred ---HCCccccCCCHHHEEEcCC-CCEEEccCcccc
Confidence 2368999999999999986 789999998764
No 282
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.24 E-value=0.0043 Score=58.12 Aligned_cols=147 Identities=14% Similarity=0.165 Sum_probs=85.2
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC--cccc-cchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG--VEVF-FDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~--~~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~ 114 (359)
+.|+.|...+||+-.... .+..+.+|.-... .... .....|+.+|+.+..-.++ .++... ++ ++||||
T Consensus 16 ~~iG~GsfavVykg~h~~----~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV-~l~d~~~~~~~i~lVMEy 90 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKK----SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIV-RLLDCIEDDDFIYLVMEY 90 (429)
T ss_pred hhccCcceEEEEEeEecc----CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCccee-eEEEEEecCCeEEEEEEe
Confidence 448889999999998764 2466667655433 1111 1234788888888733222 222222 23 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
.+|-.|+. .+..-+ .. + ....+.++.+ +...++.|.
T Consensus 91 C~gGDLs~-------yi~~~~---------~l-----~--e~t~r~Fm~Q-----------------LA~alq~L~---- 126 (429)
T KOG0595|consen 91 CNGGDLSD-------YIRRRG---------RL-----P--EATARHFMQQ-----------------LASALQFLH---- 126 (429)
T ss_pred CCCCCHHH-------HHHHcC---------CC-----C--HHHHHHHHHH-----------------HHHHHHHHH----
Confidence 99866541 111111 01 0 0122333332 222233332
Q ss_pred cCCCceeEEeccCCCCCeeEeCC-CC----ceEEEEEeeccCCchHHhHHHH
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEV-TK----SITLIDYEYASYNPVAYDIANH 241 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~-~~----~v~lIDwE~a~~~~~~~Dla~~ 241 (359)
...++|+|++|.|||+... .. .+.|=||.+|..-.+..-...+
T Consensus 127 ----~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tl 174 (429)
T KOG0595|consen 127 ----ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETL 174 (429)
T ss_pred ----HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHh
Confidence 2379999999999999763 12 3569999999987765555444
No 283
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.24 E-value=0.0024 Score=57.91 Aligned_cols=137 Identities=17% Similarity=0.122 Sum_probs=76.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-cchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-FDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~ 116 (359)
+.++.|....+|++.... .+..+++|+........ .+...|..+++.+. +...++++.... + ++++||++
T Consensus 11 ~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 11 GELGDGAFGKVYKAQHKE----TGLFAAAKIIQIESEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred HHhcCCCCceEEEEEEcC----CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEeeccC
Confidence 345667788999997642 36788899875432211 12235777777666 333455554432 2 38999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+.. .+.. . .... + ...+..+.. .+...+..|.
T Consensus 86 ~~~L~~-------~~~~-------~-~~~l-----~--~~~~~~~~~-----------------ql~~~l~~lh------ 120 (280)
T cd06611 86 GGALDS-------IMLE-------L-ERGL-----T--EPQIRYVCR-----------------QMLEALNFLH------ 120 (280)
T ss_pred CCcHHH-------HHHH-------h-cCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865531 1110 0 0000 0 011111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||..+..
T Consensus 121 --~~~i~h~dl~p~nili~~~-~~~~l~d~g~~~~ 152 (280)
T cd06611 121 --SHKVIHRDLKAGNILLTLD-GDVKLADFGVSAK 152 (280)
T ss_pred --HCCcccCCCChhhEEECCC-CCEEEccCccchh
Confidence 2258999999999999886 7899999976543
No 284
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.24 E-value=0.0041 Score=55.82 Aligned_cols=136 Identities=14% Similarity=0.136 Sum_probs=74.2
Q ss_pred ecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-cc-chHHHHHHHHHHhcCCCCceeEEEeCC---ceEEEeecCC
Q 018207 44 VKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FF-DRNDEIRTFEFMSKHGQGPRLLGRFHN---GRVEEFINAR 118 (359)
Q Consensus 44 l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~-dr~~E~~~l~~l~~~gl~P~~~~~~~~---g~v~e~i~G~ 118 (359)
|+.|....+|+....... .+..+.+|+....... .. ....|..+++.+...++. +++..... .+|+||++|.
T Consensus 3 ig~G~~g~v~~~~~~~~~--~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii-~~~~~~~~~~~~lv~e~~~~~ 79 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRK--KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIV-RMIGVCEAEALMLVMEMASGG 79 (257)
T ss_pred cCCCCcccEEEEEEecCC--CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeE-EEEEEEcCCCeEEEEEeCCCC
Confidence 566777889987543211 2446788887544221 11 124677888777544433 34444332 3899999987
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCC
Q 018207 119 TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQ 198 (359)
Q Consensus 119 ~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 198 (359)
++.. . +.. +.... + ...+..+.. .+...+..+.
T Consensus 80 ~L~~-------~-------l~~-~~~~~-----~--~~~~~~~~~-----------------~i~~~l~~lH-------- 112 (257)
T cd05115 80 PLNK-------F-------LSG-KKDEI-----T--VSNVVELMH-----------------QVSMGMKYLE-------- 112 (257)
T ss_pred CHHH-------H-------HHh-CCCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH--------
Confidence 6531 1 110 00000 0 111111111 1222222222
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|+||+++++ +.+.++||..+.
T Consensus 113 ~~~i~H~dlkp~nil~~~~-~~~kl~dfg~~~ 143 (257)
T cd05115 113 GKNFVHRDLAARNVLLVNQ-HYAKISDFGLSK 143 (257)
T ss_pred hcCeeecccchheEEEcCC-CcEEeccCCccc
Confidence 2268999999999999886 778999998765
No 285
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.23 E-value=0.0021 Score=58.14 Aligned_cols=136 Identities=14% Similarity=0.053 Sum_probs=77.0
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccccchHHHHHHHHHHhcCCCCceeEEEe-CC--ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVFFDRNDEIRTFEFMSKHGQGPRLLGRF-HN--GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~~--g~v~e~i~ 116 (359)
..++.|..+.+|++.... .+..+++|+..... ........|..+++.+....+.+-.-... .. .+++||++
T Consensus 7 ~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 82 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKR----TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG 82 (274)
T ss_pred hhhcCCCCeEEEEEEECC----CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence 446667788999987542 36889999876432 11122346777777776444444322222 22 38999998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|.++.. .+ +.... + ...+..+.. .+...+..+.
T Consensus 83 ~~~L~~--------------~~---~~~~~-----~--~~~~~~~~~-----------------ql~~~l~~lh------ 115 (274)
T cd06609 83 GGSCLD--------------LL---KPGKL-----D--ETYIAFILR-----------------EVLLGLEYLH------ 115 (274)
T ss_pred CCcHHH--------------HH---hhcCC-----C--HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865421 01 11111 0 111111111 1111222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 116 --~~~i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~ 147 (274)
T cd06609 116 --EEGKIHRDIKAANILLSEE-GDVKLADFGVSGQ 147 (274)
T ss_pred --hCCcccCCCCHHHEEECCC-CCEEEccccccee
Confidence 1358999999999999986 7899999986644
No 286
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.23 E-value=0.0023 Score=57.70 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=76.2
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--------C--ceE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--------N--GRV 111 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--------~--g~v 111 (359)
+.++.|....+|++.... .+..+++|+.............|..++..+..+.-..+++..+. . .++
T Consensus 12 ~~lg~g~~g~vy~~~~~~----~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 87 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVK----TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 87 (272)
T ss_pred HheeecCCeEEEEEEEcC----CCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence 446667778899987542 35788888875432221223467777777754433344443321 1 278
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|..+.. .+.. +. .. +.....+..+. ..+...+..|.
T Consensus 88 ~e~~~~~~L~~--------------~l~~-~~----~~--~l~~~~~~~~~-----------------~qi~~~l~~LH- 128 (272)
T cd06637 88 MEFCGAGSVTD--------------LIKN-TK----GN--TLKEEWIAYIC-----------------REILRGLSHLH- 128 (272)
T ss_pred EEcCCCCcHHH--------------HHHh-cc----CC--CCCHHHHHHHH-----------------HHHHHHHHHHH-
Confidence 89888765421 1111 00 00 00011111111 11222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 129 -------~~~ivh~dl~~~nili~~~-~~~~l~Dfg~~~~ 160 (272)
T cd06637 129 -------QHKVIHRDIKGQNVLLTEN-AEVKLVDFGVSAQ 160 (272)
T ss_pred -------HCCCccCCCCHHHEEECCC-CCEEEccCCCcee
Confidence 1268999999999999986 7899999998753
No 287
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.23 E-value=0.0017 Score=58.82 Aligned_cols=137 Identities=17% Similarity=0.208 Sum_probs=75.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccc-cchHHHHHHHHHHhcCCCCceeEEEe--C--C--ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVF-FDRNDEIRTFEFMSKHGQGPRLLGRF--H--N--GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~--g~v 111 (359)
++.++.|..+.+|++.... .+..+++|...... ... .+...|..+++.+....+.+ ++... . + .+|
T Consensus 4 ~~~l~~g~~~~vy~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~~~lv 78 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKK----TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVR-LKEIVTSKGKGSIYMV 78 (287)
T ss_pred eEEeccCCCeEEEEEEECC----CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeee-heeeEecCCCCcEEEE
Confidence 3567778889999997642 35788898886542 111 12235777787776444433 22222 2 1 278
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
++|+++ .+. ..+ +..... .. ......+.. .+.+.+..|.
T Consensus 79 ~e~~~~-~l~--------------~~~---~~~~~~----~~-~~~~~~i~~-----------------~i~~al~~LH- 117 (287)
T cd07840 79 FEYMDH-DLT--------------GLL---DSPEVK----FT-ESQIKCYMK-----------------QLLEGLQYLH- 117 (287)
T ss_pred eccccc-cHH--------------HHH---hccCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 888865 211 111 110000 00 111111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.+.||..+..
T Consensus 118 -------~~~~~h~dl~p~nil~~~~-~~~~l~d~g~~~~ 149 (287)
T cd07840 118 -------SNGILHRDIKGSNILINND-GVLKLADFGLARP 149 (287)
T ss_pred -------HCCceeccCcHHHeEEcCC-CCEEEccccceee
Confidence 1268999999999999986 7899999987664
No 288
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.23 E-value=0.0051 Score=55.54 Aligned_cols=80 Identities=20% Similarity=0.202 Sum_probs=48.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCC-CCCcEEEEEEeCCCccc-cc-chHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTE-TFSHKVLLRVYGEGVEV-FF-DRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~-~~~~~~vlRi~~~~~~~-~~-dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
.++.++.|..+.+|++....... .....+.+|........ .. ....|..+++.+...++ ++++..+.+ .+++
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ 87 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV-VRLLGLCREAEPHYMIL 87 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcce-eeeEEEECCCCcceEEE
Confidence 45667778889999997542211 12456778877543222 11 22468888888765444 355555432 4899
Q ss_pred EeecCCCC
Q 018207 113 EFINARTL 120 (359)
Q Consensus 113 e~i~G~~l 120 (359)
||++|.+|
T Consensus 88 e~~~~~~L 95 (275)
T cd05046 88 EYTDLGDL 95 (275)
T ss_pred EecCCCcH
Confidence 99987554
No 289
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.23 E-value=0.0027 Score=57.07 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=26.3
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 126 ~i~H~dl~p~nil~~~~-~~~~l~Dfg~~~~ 155 (265)
T cd06652 126 MIVHRDIKGANILRDSV-GNVKLGDFGASKR 155 (265)
T ss_pred CEecCCCCHHHEEecCC-CCEEECcCccccc
Confidence 58999999999999986 7899999987764
No 290
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.22 E-value=0.004 Score=56.91 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=26.9
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 141 ~~~i~H~dlkp~Nil~~~~-~~~~l~dfg~a~ 171 (291)
T cd05094 141 SQHFVHRDLATRNCLVGAN-LLVKIGDFGMSR 171 (291)
T ss_pred hCCeeecccCcceEEEccC-CcEEECCCCccc
Confidence 3378999999999999986 788999999775
No 291
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.22 E-value=0.0019 Score=58.99 Aligned_cols=139 Identities=14% Similarity=0.057 Sum_probs=77.2
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-c--c-ccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-E--V-FFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~--~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~ 112 (359)
++.|+.|....+|++.... .+..+.+|+..... . . .....+|..+++.+....+.+ ++.... + .+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~ 79 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS-LAYAYETKDALCLVL 79 (285)
T ss_pred EEEEecCCCeEEEEEEEcC----CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEee-eeeeecCCCeEEEEE
Confidence 4567778889999997542 35788888775321 1 0 011135777777775444443 333332 2 3899
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|..+.. .+........ + ......+.. .+...+..+.+
T Consensus 80 e~~~~~~L~~--------------~~~~~~~~~~-----~--~~~~~~~~~-----------------qi~~~l~~lH~- 120 (285)
T cd05605 80 TLMNGGDLKF--------------HIYNMGNPGF-----D--EERAVFYAA-----------------EITCGLEDLHR- 120 (285)
T ss_pred eccCCCcHHH--------------HHHhcCcCCC-----C--HHHHHHHHH-----------------HHHHHHHHHHH-
Confidence 9998865431 0111000000 1 111111111 12222222221
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|++|.||+++++ +.+.++||..+..
T Consensus 121 -------~~ivH~dlkp~Nil~~~~-~~~~l~Dfg~~~~ 151 (285)
T cd05605 121 -------ERIVYRDLKPENILLDDY-GHIRISDLGLAVE 151 (285)
T ss_pred -------CCcEecCCCHHHEEECCC-CCEEEeeCCCcee
Confidence 268999999999999886 7899999987754
No 292
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.22 E-value=0.0034 Score=57.31 Aligned_cols=149 Identities=15% Similarity=0.134 Sum_probs=76.9
Q ss_pred EEEecCCcceeEEEEEeCCC-CCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTK-TETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~-~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
.+.|+.|....+|++...+. .+..+..+.+|........ ...-..|..+++.+... -.++++..... .+++|
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e 89 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVME 89 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCC-CeeeEEEEEcCCCCcEEEEe
Confidence 46678888899999864321 1112457888875433211 11112455566555432 24555554432 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcc-cchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIV-RLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
|++|.+|.. .+.+...........+ .....+..+. ..+...+..+.
T Consensus 90 ~~~~g~L~~--------------~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~l~~~l~~lH-- 136 (288)
T cd05061 90 LMAHGDLKS--------------YLRSLRPEAENNPGRPPPTLQEMIQMA-----------------AEIADGMAYLN-- 136 (288)
T ss_pred CCCCCCHHH--------------HHHHhccccccCCCCCCCCHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 998866531 1111111000000001 0011111111 11222222221
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 137 ------~~~i~H~dikp~nili~~~-~~~~L~Dfg~~~ 167 (288)
T cd05061 137 ------AKKFVHRDLAARNCMVAHD-FTVKIGDFGMTR 167 (288)
T ss_pred ------hCCCcCCCCChheEEEcCC-CcEEECcCCccc
Confidence 2368999999999999986 789999998765
No 293
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.22 E-value=0.0024 Score=57.82 Aligned_cols=29 Identities=28% Similarity=0.425 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 139 ~~vH~dlkp~Nil~~~~-~~~~l~dfg~~~ 167 (277)
T cd05062 139 KFVHRDLAARNCMVAED-FTVKIGDFGMTR 167 (277)
T ss_pred CcccCCcchheEEEcCC-CCEEECCCCCcc
Confidence 68999999999999986 789999998765
No 294
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.21 E-value=0.0031 Score=59.40 Aligned_cols=30 Identities=30% Similarity=0.598 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 138 gi~H~dlkp~Nill~~~-~~~kl~dfg~~~~ 167 (343)
T cd07880 138 GIIHRDLKPGNLAVNED-CELKILDFGLARQ 167 (343)
T ss_pred CeecCCCCHHHEEEcCC-CCEEEeecccccc
Confidence 68999999999999986 7899999997753
No 295
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.21 E-value=0.0015 Score=59.74 Aligned_cols=31 Identities=19% Similarity=0.445 Sum_probs=26.8
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|++|.||+++++ +.+.|.||..+..
T Consensus 146 ~~ivH~dikp~nill~~~-~~~kl~dfg~~~~ 176 (290)
T cd05045 146 MKLVHRDLAARNVLVAEG-RKMKISDFGLSRD 176 (290)
T ss_pred CCeehhhhhhheEEEcCC-CcEEecccccccc
Confidence 478999999999999886 7889999987753
No 296
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.21 E-value=0.0033 Score=59.90 Aligned_cols=142 Identities=19% Similarity=0.233 Sum_probs=81.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC-c--cc--cc-chHHHHHHHHHHhcCCCCceeEEEe--CC--c
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG-V--EV--FF-DRNDEIRTFEFMSKHGQGPRLLGRF--HN--G 109 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~-~--~~--~~-dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g 109 (359)
--+.++.|....++...... .+..+.+|+.... . .. .. ...+|..+++.+..+.-.-+++... +. .
T Consensus 21 ~~~~lG~GsfgkV~~a~~~~----t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 21 LGRTLGSGSFGKVKLAKHRL----TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY 96 (370)
T ss_pred eeeeecCCCCeeEEEeeecc----CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence 34667778889999986542 2588888876543 1 11 11 1246888888887443222232222 22 4
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
+||||..|..| ... +.+ +. .. .. ...+.++.+ +-..++.
T Consensus 97 ivmEy~~gGdL----------~~~----i~~-~g-~l-----~E--~~ar~~F~Q-----------------lisav~y- 135 (370)
T KOG0583|consen 97 IVMEYCSGGDL----------FDY----IVN-KG-RL-----KE--DEARKYFRQ-----------------LISAVAY- 135 (370)
T ss_pred EEEEecCCccH----------HHH----HHH-cC-CC-----Ch--HHHHHHHHH-----------------HHHHHHH-
Confidence 89999887221 111 111 00 00 00 112222221 1111121
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
-...+++|+||+|.|||++++.+.+.|+||+++...+
T Consensus 136 -------~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 136 -------CHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred -------HHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 2234899999999999999854689999999998765
No 297
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.20 E-value=0.0043 Score=55.85 Aligned_cols=29 Identities=31% Similarity=0.410 Sum_probs=25.9
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 120 ~ivH~dlkp~Nill~~~-~~~kl~dfg~~~ 148 (269)
T cd05042 120 DFIHSDLALRNCQLTAD-LSVKIGDYGLAL 148 (269)
T ss_pred CEecccccHhheEecCC-CcEEEecccccc
Confidence 58999999999999986 789999998764
No 298
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.19 E-value=0.0039 Score=56.57 Aligned_cols=138 Identities=19% Similarity=0.221 Sum_probs=76.8
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccc-hHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFD-RNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~d-r~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
+..+..|..+.+|++.... .+..+++|....... .... ...|..+++.+....+. +++.... . .+++|
T Consensus 6 ~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRE----TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLV-NLIEVFRRKRKLHLVFE 80 (286)
T ss_pred eeeecccCCeEEEEEEECC----CCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEe-eeeeEEeeCCEEEEEEe
Confidence 3567778889999987642 367899998753321 1111 13577777776543333 3333332 2 37899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|..+. .+ +. . ... .. ......+.. .+.+.+..|.+
T Consensus 81 ~~~~~~l~-----------~~---~~---~---~~~--~~-~~~~~~~~~-----------------ql~~~l~~LH~-- 118 (286)
T cd07847 81 YCDHTVLN-----------EL---EK---N---PRG--VP-EHLIKKIIW-----------------QTLQAVNFCHK-- 118 (286)
T ss_pred ccCccHHH-----------HH---Hh---C---CCC--CC-HHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 99874332 11 00 0 000 00 111111111 12222222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
..++|+|++|.||+++++ +.+.|+||..+..-
T Consensus 119 ------~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~ 150 (286)
T cd07847 119 ------HNCIHRDVKPENILITKQ-GQIKLCDFGFARIL 150 (286)
T ss_pred ------CCceecCCChhhEEEcCC-CcEEECccccceec
Confidence 357999999999999986 78999999887653
No 299
>PTZ00284 protein kinase; Provisional
Probab=97.18 E-value=0.0051 Score=60.60 Aligned_cols=53 Identities=9% Similarity=-0.044 Sum_probs=33.9
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCC
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHG 97 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~g 97 (359)
+..|+.|....||++.... .+..+.+|+.........+...|.++++.+....
T Consensus 134 ~~~lG~G~fg~V~~a~~~~----~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~ 186 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRK----RKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQAD 186 (467)
T ss_pred EEEEEeccCEEEEEEEEcC----CCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcC
Confidence 3467778889999997542 2577889987532211112346788887776544
No 300
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.18 E-value=0.0043 Score=56.63 Aligned_cols=80 Identities=18% Similarity=0.185 Sum_probs=46.2
Q ss_pred EEEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCc-c-cccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGV-E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~-~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e 113 (359)
.+.++.|....+|++...... ......+.+|...... . ...+...|..+++.+.++....+++.... + .+++|
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e 96 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE 96 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence 456677888899998754211 0123567888775431 1 11122357777777744433344554443 2 37999
Q ss_pred eecCCCC
Q 018207 114 FINARTL 120 (359)
Q Consensus 114 ~i~G~~l 120 (359)
|++|.++
T Consensus 97 ~~~~~~L 103 (293)
T cd05053 97 YAAHGNL 103 (293)
T ss_pred eCCCCcH
Confidence 9988654
No 301
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.17 E-value=0.0034 Score=55.90 Aligned_cols=136 Identities=15% Similarity=0.123 Sum_probs=75.9
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc------cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE------VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~------~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
+.|+.|....+|++.... .+..+++|....... .......|..+++.+...++ .+++....+ .++
T Consensus 6 ~~ig~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv 80 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLD----DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI-VQYLGTEREEDNLYIF 80 (258)
T ss_pred ceeeecCCceEEEEEEcC----CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCc-hheeeeEecCCeEEEE
Confidence 456667778999987542 367899998753221 11112356666666644333 334444332 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|.++.. .+.+.+. . . ......+.. .+.+.+..|.
T Consensus 81 ~e~~~~~~L~~--------------~~~~~~~--~------~-~~~~~~~~~-----------------~i~~~l~~lH- 119 (258)
T cd06632 81 LELVPGGSLAK--------------LLKKYGS--F------P-EPVIRLYTR-----------------QILLGLEYLH- 119 (258)
T ss_pred EEecCCCcHHH--------------HHHhcCC--C------C-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999865431 1111100 0 0 111111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.|+||..+..
T Consensus 120 -------~~~i~H~dl~~~ni~~~~~-~~~kl~d~~~~~~ 151 (258)
T cd06632 120 -------DRNTVHRDIKGANILVDTN-GVVKLADFGMAKQ 151 (258)
T ss_pred -------HCCcccCCCCHHHEEECCC-CCEEEccCcccee
Confidence 1268999999999999886 7899999987654
No 302
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.17 E-value=0.0016 Score=58.98 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=26.3
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|+||+++++ +.+.+.||..+.
T Consensus 120 ~~ivH~dl~p~ni~i~~~-~~~~l~dfg~~~ 149 (277)
T cd06642 120 ERKIHRDIKAANVLLSEQ-GDVKLADFGVAG 149 (277)
T ss_pred CCeeccCCChheEEEeCC-CCEEEccccccc
Confidence 368999999999999986 789999998765
No 303
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.16 E-value=0.0013 Score=63.11 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=79.9
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEE---EEeCCCcccccchHHHHHHHHHHhcCCCCc-eeEEEeC-C---ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLL---RVYGEGVEVFFDRNDEIRTFEFMSKHGQGP-RLLGRFH-N---GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vl---Ri~~~~~~~~~dr~~E~~~l~~l~~~gl~P-~~~~~~~-~---g~v 111 (359)
++..|+.|.-..||+..... .++-+-+ |+-+......+-..+|+.+|+.|..-.+.. .-+.... . .+|
T Consensus 121 ki~kIGeGTyg~VYkAr~~~----tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 121 KIEKIGEGTYGQVYKARDLE----TGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHhcCcchhheeEeeecc----cCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 56778889999999997542 2333444 333322333344468999999988765532 2222222 2 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||.+..-.. -++.-.+.. .. ..+..++.++ ..
T Consensus 197 FeYMdhDL~G------------------Ll~~p~vkf-t~----~qIKc~mkQL------------------------l~ 229 (560)
T KOG0600|consen 197 FEYMDHDLSG------------------LLSSPGVKF-TE----PQIKCYMKQL------------------------LE 229 (560)
T ss_pred Eecccchhhh------------------hhcCCCccc-Ch----HHHHHHHHHH------------------------HH
Confidence 9998753110 011100100 01 1233333322 11
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
-+. .-+...+.|+|++..|||+|++ +.+.|=||..|..
T Consensus 230 Gl~-~cH~~gvlHRDIK~SNiLidn~-G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 230 GLE-YCHSRGVLHRDIKGSNILIDNN-GVLKIADFGLARF 267 (560)
T ss_pred HHH-HHhhcCeeeccccccceEEcCC-CCEEeccccceee
Confidence 111 1234589999999999999986 8899999999983
No 304
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.15 E-value=0.0035 Score=57.85 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=26.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
.++|+|++|+||+++++ +.+.+.||..+...
T Consensus 135 ~i~H~dl~p~nIl~~~~-~~~kL~dfg~~~~~ 165 (307)
T cd06607 135 ERIHRDIKAGNILLTEP-GTVKLADFGSASLV 165 (307)
T ss_pred CceecCCCcccEEECCC-CCEEEeecCcceec
Confidence 57999999999999986 78999999877543
No 305
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.14 E-value=0.0021 Score=59.10 Aligned_cols=30 Identities=27% Similarity=0.451 Sum_probs=26.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++++ +.+.++||..+..
T Consensus 135 ~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~ 164 (311)
T cd07866 135 HILHRDIKAANILIDNQ-GILKIADFGLARP 164 (311)
T ss_pred CeecCCCCHHHEEECCC-CCEEECcCccchh
Confidence 68999999999999986 7899999987764
No 306
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.14 E-value=0.004 Score=56.01 Aligned_cols=29 Identities=21% Similarity=0.438 Sum_probs=25.6
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 127 ~i~H~dlkp~Nili~~~-~~~kl~dfg~~~ 155 (268)
T cd05063 127 NYVHRDLAARNILVNSN-LECKVSDFGLSR 155 (268)
T ss_pred CeeccccchhhEEEcCC-CcEEECCCccce
Confidence 58999999999999986 778999998765
No 307
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.13 E-value=0.0028 Score=57.56 Aligned_cols=136 Identities=18% Similarity=0.168 Sum_probs=74.2
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--c-cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
++.++.|....+|++.... .+..+++|...... . .......|..+++.+....+. +++.... + .+++|
T Consensus 5 ~~~l~~g~~~~vy~~~~~~----~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRE----THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV-RLYDVLHSDKKLTLVFE 79 (284)
T ss_pred EEEecccCCeEEEEEEECC----CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCee-eHHHHhccCCceEEEEe
Confidence 3567778888999997643 36778888765321 1 111224688888777543332 2222222 1 37888
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|. +. .. ++.... +.....+..+.. .+.+.+..|.
T Consensus 80 ~~~~~-l~----------~~-------~~~~~~-----~~~~~~~~~~~~-----------------qi~~al~~LH--- 116 (284)
T cd07839 80 YCDQD-LK----------KY-------FDSCNG-----DIDPEIVKSFMF-----------------QLLKGLAFCH--- 116 (284)
T ss_pred cCCCC-HH----------HH-------HHhcCC-----CCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 88651 10 00 111100 000111111111 1222222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|+||+++.+ +.+.|+||+.+.
T Consensus 117 -----~~~i~H~dl~~~nil~~~~-~~~~l~dfg~~~ 147 (284)
T cd07839 117 -----SHNVLHRDLKPQNLLINKN-GELKLADFGLAR 147 (284)
T ss_pred -----HCCEecCCCCHHHEEEcCC-CcEEECccchhh
Confidence 1268999999999999986 789999998765
No 308
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.13 E-value=0.0064 Score=56.17 Aligned_cols=72 Identities=11% Similarity=0.039 Sum_probs=42.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe---CC---ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF---HN---GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~---~~---g~v~e~i 115 (359)
..|+.|....+|++..... ..+..+.+|...... ......+|..+++.+....+.+ ++... .+ .++++|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~--~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDG--KDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIA-LQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCC--CccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeee-EEEEEeccCCCeEEEEEeee
Confidence 4577888899999975421 134678888764321 1112346888888776544433 22222 12 2788988
Q ss_pred cC
Q 018207 116 NA 117 (359)
Q Consensus 116 ~G 117 (359)
++
T Consensus 83 ~~ 84 (317)
T cd07867 83 EH 84 (317)
T ss_pred CC
Confidence 76
No 309
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.12 E-value=0.0023 Score=58.15 Aligned_cols=80 Identities=16% Similarity=0.098 Sum_probs=45.0
Q ss_pred EEEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
...++.|....+|++...... ...+..+.+|........ ..+...|..+++.+...++. +++....+ .+++||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIV-RFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCc-eEEEEEecCCceEEEEec
Confidence 455676788899998643211 112345666665433211 12234677777777544443 44444432 388999
Q ss_pred ecCCCCC
Q 018207 115 INARTLS 121 (359)
Q Consensus 115 i~G~~l~ 121 (359)
.+|.++.
T Consensus 89 ~~~~~L~ 95 (280)
T cd05092 89 MRHGDLN 95 (280)
T ss_pred CCCCCHH
Confidence 9887653
No 310
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.12 E-value=0.0016 Score=59.13 Aligned_cols=79 Identities=14% Similarity=0.077 Sum_probs=44.4
Q ss_pred EEEecCCcceeEEEEEeCCCCC-CCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC----CceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTE-TFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH----NGRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~-~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~----~g~v~e 113 (359)
.+.|+.|....+|++......+ ..+..+.+|........ ..+...|..+++.+...++. +++..+. ..+++|
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e 89 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIV-RLIGVSFERLPRFILLE 89 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEe-eEEEEEccCCCcEEEEe
Confidence 4567788889999987642110 02457778876533211 11223466666666543333 4444332 238999
Q ss_pred eecCCCC
Q 018207 114 FINARTL 120 (359)
Q Consensus 114 ~i~G~~l 120 (359)
|.+|.+|
T Consensus 90 ~~~g~~L 96 (277)
T cd05036 90 LMAGGDL 96 (277)
T ss_pred cCCCCCH
Confidence 9988654
No 311
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.12 E-value=0.0011 Score=60.03 Aligned_cols=29 Identities=28% Similarity=0.603 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|+||+++++ +.+.|.||..+.
T Consensus 119 ~i~H~dl~~~ni~i~~~-~~~~l~d~~~~~ 147 (283)
T cd07830 119 GFFHRDLKPENLLVSGP-EVVKIADFGLAR 147 (283)
T ss_pred CcccCCCChhhEEEcCC-CCEEEeecccce
Confidence 68999999999999986 789999998765
No 312
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.11 E-value=0.004 Score=56.30 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=75.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc---ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV---FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~---~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~ 114 (359)
+.++.|..+.+|++.... .+..+++|........ ......|..+++.+...++. +++... .+ ..++||
T Consensus 5 ~~i~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 5 GKIGEGTYGVVYKARDKL----TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNII-KLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred eeeecCCCceEEEEEcCC----CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcc-hHHHhhccCCCEEEEEec
Confidence 457777788999997542 3678889887543211 11224577777777643333 233222 22 378898
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
.++ .+. .. +.+ +.... . ......+.. .+.+.+..|.
T Consensus 80 ~~~-~l~----------~~----l~~-~~~~~------~-~~~~~~~~~-----------------~i~~~l~~LH---- 115 (283)
T cd05118 80 MDT-DLY----------KL----IKD-RQRGL------P-ESLIKSYLY-----------------QLLQGLAFCH---- 115 (283)
T ss_pred cCC-CHH----------HH----HHh-hcccC------C-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 876 221 11 110 00000 0 111111111 1112222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
...++|+|++|.||+++++ +.+.++||+.+.....
T Consensus 116 ----~~~i~H~dl~p~nili~~~-~~~~l~df~~~~~~~~ 150 (283)
T cd05118 116 ----SHGILHRDLKPENLLINTE-GVLKLADFGLARSFGS 150 (283)
T ss_pred ----HCCeeecCcCHHHEEECCC-CcEEEeeeeeeEecCC
Confidence 2368999999999999986 7899999998765433
No 313
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.10 E-value=0.0029 Score=58.39 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=47.3
Q ss_pred EEEecCCcceeEEEEEeCCCCC---CCCcEEEEEEeCCCc--ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTE---TFSHKVLLRVYGEGV--EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~---~~~~~~vlRi~~~~~--~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
.+.|+.|....+|++....... .....+++|+..... ....+...|..+++.+.++.-.++++..... .++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 102 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 3677778888999986432110 113468888876432 1111223577777777555445555554432 389
Q ss_pred EEeecCCCC
Q 018207 112 EEFINARTL 120 (359)
Q Consensus 112 ~e~i~G~~l 120 (359)
+||++|..|
T Consensus 103 ~e~~~~~~L 111 (307)
T cd05098 103 VEYASKGNL 111 (307)
T ss_pred EecCCCCcH
Confidence 999987654
No 314
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.10 E-value=0.0047 Score=55.43 Aligned_cols=135 Identities=15% Similarity=0.133 Sum_probs=74.4
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-------cchHHHHHHHHHHhcCCCCceeEEEeC-C---ce
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-------FDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GR 110 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-------~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~ 110 (359)
..++.|..+.+|++... .+..+++|......... .....|..+++.+...++ ++++.... + .+
T Consensus 6 ~~ig~g~~~~v~~~~~~-----~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~l 79 (265)
T cd06631 6 EVLGKGAYGTVYCGLTN-----QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI-VQYLGTCLDDNTISI 79 (265)
T ss_pred ceEeccCCeEEEEEEEc-----CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCE-eeEeeEeecCCeEEE
Confidence 44667778899998643 25778888764322110 112346666666654333 34444432 2 37
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
++||++|.++. ..+.+-+. . + ...+..+..+ +...++.+.
T Consensus 80 v~e~~~~~~L~--------------~~l~~~~~--~-----~--~~~~~~~~~q-----------------i~~~l~~lH 119 (265)
T cd06631 80 FMEFVPGGSIS--------------SILNRFGP--L-----P--EPVFCKYTKQ-----------------ILDGVAYLH 119 (265)
T ss_pred EEecCCCCcHH--------------HHHHhcCC--C-----C--HHHHHHHHHH-----------------HHHHHHHHH
Confidence 99999986543 11111110 0 0 1112222211 112222221
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 120 --------~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~ 151 (265)
T cd06631 120 --------NNCVVHRDIKGNNVMLMPN-GIIKLIDFGCARR 151 (265)
T ss_pred --------hCCcccCCcCHHhEEECCC-CeEEeccchhhHh
Confidence 1258999999999999876 7899999987654
No 315
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.10 E-value=0.0094 Score=51.60 Aligned_cols=138 Identities=20% Similarity=0.199 Sum_probs=78.1
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEe-C---CceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRF-H---NGRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~-~---~g~v~e~i 115 (359)
+.++.|....+|++.... .+..+++|........ ..+...|...++.+...++.+ ++... . ...+++|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~-~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 5 KKLGEGAFGKVYLARDKG----TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVK-LYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred eEeecCCCeEEEEEEEcC----CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhh-heeeeecCCceEEEEecc
Confidence 556677788999998652 2578999998754321 222346777777775444333 33322 2 24789999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.++.. .+..... . .. ......+.. .+...+..+.
T Consensus 80 ~~~~L~~--------------~~~~~~~---~----~~-~~~~~~~~~-----------------~l~~~l~~lh----- 115 (225)
T smart00221 80 EGGDLFD--------------YLRKKGG---K----LS-EEEARFYLR-----------------QILEALEYLH----- 115 (225)
T ss_pred CCCCHHH--------------HHHhccc---C----CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8764321 1111000 0 00 011111111 1111112221
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...++|+|+++.||+++++ +.+.++||+.+...
T Consensus 116 ---~~~i~h~di~~~ni~v~~~-~~~~l~d~g~~~~~ 148 (225)
T smart00221 116 ---SLGIVHRDLKPENILLGMD-GLVKLADFGLARFI 148 (225)
T ss_pred ---hCCeecCCCCHHHEEEcCC-CCEEEeeCceeeEe
Confidence 1288999999999999986 78999999977754
No 316
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.10 E-value=0.0035 Score=58.51 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 123 ~ivH~dlkp~NIll~~~-~~~kL~Dfg~~~ 151 (338)
T cd07859 123 NVFHRDLKPKNILANAD-CKLKICDFGLAR 151 (338)
T ss_pred CeecCCCCHHHeEECCC-CcEEEccCcccc
Confidence 69999999999999986 789999998775
No 317
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.09 E-value=0.0068 Score=54.57 Aligned_cols=139 Identities=17% Similarity=0.156 Sum_probs=74.2
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-c-ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-V-FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i 115 (359)
+.++.|....+|++..... +..+..+.+|+...... . ......|..+++.+.... ..+++....+ .+++||+
T Consensus 10 ~~lg~g~~g~vy~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLP-GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN-IIHLEGVVTKSRPVMIITEFM 87 (269)
T ss_pred eEecCCCCCeEEEEEEecC-CCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcC-cceEEEEECCCCceEEEEecC
Confidence 4566677889999876431 11124688888754311 1 112235666666664333 3344444332 3789999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.++.. .+.. .. .. .. ...+..+.. .+...+..+.
T Consensus 88 ~~~~L~~--------------~l~~---~~--~~--~~-~~~~~~i~~-----------------~l~~al~~lH----- 123 (269)
T cd05065 88 ENGALDS--------------FLRQ---ND--GQ--FT-VIQLVGMLR-----------------GIAAGMKYLS----- 123 (269)
T ss_pred CCCcHHH--------------HHhh---CC--CC--CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8865421 1110 00 00 00 111111111 1112222221
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 124 ---~~g~~H~dl~p~nili~~~-~~~kl~dfg~~~ 154 (269)
T cd05065 124 ---EMNYVHRDLAARNILVNSN-LVCKVSDFGLSR 154 (269)
T ss_pred ---HCCEeecccChheEEEcCC-CcEEECCCcccc
Confidence 2378999999999999876 688899998764
No 318
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.08 E-value=0.0044 Score=56.82 Aligned_cols=29 Identities=28% Similarity=0.575 Sum_probs=25.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 135 ~i~H~dl~p~nill~~~-~~~kL~dfg~~~ 163 (296)
T cd06618 135 GVIHRDVKPSNILLDAS-GNVKLCDFGISG 163 (296)
T ss_pred CEecCCCcHHHEEEcCC-CCEEECccccch
Confidence 68999999999999876 789999998764
No 319
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.08 E-value=0.0063 Score=56.13 Aligned_cols=138 Identities=13% Similarity=0.120 Sum_probs=77.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--c-cccchHHHHHHHHHHhcCCCCceeEEEe--C--C--ce
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--E-VFFDRNDEIRTFEFMSKHGQGPRLLGRF--H--N--GR 110 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~--g~ 110 (359)
.+..|+.|....+|++.... .+..+++|...... . ......+|..+++.+...++.+ ++... . + .+
T Consensus 11 ~~~~ig~g~~~~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~-~~~~~~~~~~~~~~l 85 (309)
T cd07845 11 KLNRIGEGTYGIVYRARDTT----SGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVE-LKEVVVGKHLDSIFL 85 (309)
T ss_pred EeeeeeecCCEEEEEEEECC----CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcc-eEEEEecCCCCeEEE
Confidence 34567778889999997642 36788888775321 1 1122246888888887655543 33322 2 1 37
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
|+||.+| .+. ..+.+.+ . +-....+..+.. .+.+.+..|.
T Consensus 86 v~e~~~~-~l~--------------~~l~~~~---~-----~l~~~~~~~~~~-----------------qi~~~l~~lH 125 (309)
T cd07845 86 VMEYCEQ-DLA--------------SLLDNMP---T-----PFSESQVKCLML-----------------QLLRGLQYLH 125 (309)
T ss_pred EEecCCC-CHH--------------HHHHhcc---c-----CCCHHHHHHHHH-----------------HHHHHHHHHH
Confidence 8888765 111 1111111 0 000111111111 1222222222
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.|+||..+..
T Consensus 126 --------~~~i~H~dl~p~nil~~~~-~~~kL~dfg~~~~ 157 (309)
T cd07845 126 --------ENFIIHRDLKVSNLLLTDK-GCLKIADFGLART 157 (309)
T ss_pred --------hCCeecCCCCHHHEEECCC-CCEEECccceeee
Confidence 1258999999999999986 7899999987764
No 320
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.07 E-value=0.0024 Score=56.59 Aligned_cols=133 Identities=17% Similarity=0.134 Sum_probs=73.5
Q ss_pred cCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc---cc-chHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEeec
Q 018207 45 KGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV---FF-DRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFIN 116 (359)
Q Consensus 45 ~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~---~~-dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i~ 116 (359)
+.|....+|++.... .+..+++|+....... .. ....|..+++.+...++.+ ++... .+ .++++|++
T Consensus 2 g~G~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~v~e~~~ 76 (250)
T cd05123 2 GKGSFGKVLLVRKKD----TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVK-LHYAFQTEEKLYLVLEYAP 76 (250)
T ss_pred CCCCceEEEEEEECC----CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHH-HHHHeecCCeeEEEEecCC
Confidence 446667899887542 3678999987654211 11 1245777777776444433 33222 22 37899998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+. +.+.+... . + ...+..+.. .+.+.+..+.
T Consensus 77 ~~~L~--------------~~l~~~~~--l-----~--~~~~~~~~~-----------------qi~~~l~~lh------ 110 (250)
T cd05123 77 GGELF--------------SHLSKEGR--F-----S--EERARFYAA-----------------EIVLALEYLH------ 110 (250)
T ss_pred CCcHH--------------HHHHhcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 75542 11111100 0 0 111111111 1222222222
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++.+ +.+.++||+.+..
T Consensus 111 --~~~~~H~~l~p~ni~~~~~-~~~~l~d~~~~~~ 142 (250)
T cd05123 111 --SLGIIYRDLKPENILLDAD-GHIKLTDFGLAKE 142 (250)
T ss_pred --HCCceecCCCcceEEEcCC-CcEEEeecCccee
Confidence 1468999999999999986 7889999987754
No 321
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.07 E-value=0.0061 Score=55.46 Aligned_cols=136 Identities=17% Similarity=0.172 Sum_probs=75.5
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cc-cchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VF-FDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i 115 (359)
+.|+.|..+.+|++.... .+..+.+|+...... .. .....|.++++.+...++ ++++.... + .+++||+
T Consensus 11 ~~ig~g~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIP----TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYI-VSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHcCCCCCeEEEEEEEcC----CCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCc-ceEeeeEecCCEEEEEEecC
Confidence 456778889999987542 257788887653321 11 112357777777654344 33443332 2 3899999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|..+.. . +.+ .. +........+.. .+...+..|.+
T Consensus 86 ~~~~L~~-------~-------~~~---~~------~~~~~~~~~~~~-----------------~i~~~l~~LH~---- 121 (284)
T cd06620 86 DCGSLDR-------I-------YKK---GG------PIPVEILGKIAV-----------------AVVEGLTYLYN---- 121 (284)
T ss_pred CCCCHHH-------H-------HHh---cc------CCCHHHHHHHHH-----------------HHHHHHHHHHH----
Confidence 9875531 1 111 00 000111111111 11122222221
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 122 ---~~~i~H~dl~p~nil~~~~-~~~~l~d~gl~~ 152 (284)
T cd06620 122 ---VHRIMHRDIKPSNILVNSR-GQIKLCDFGVSG 152 (284)
T ss_pred ---hcCeeccCCCHHHEEECCC-CcEEEccCCccc
Confidence 1258999999999999886 789999998764
No 322
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=97.07 E-value=0.007 Score=59.77 Aligned_cols=38 Identities=24% Similarity=0.493 Sum_probs=30.2
Q ss_pred ceeEEeccCCCCCeeEeCC-CCceEEEEEeeccCCchHH
Q 018207 199 HIGFCHNDLQYGNIMIDEV-TKSITLIDYEYASYNPVAY 236 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~-~~~v~lIDwE~a~~~~~~~ 236 (359)
...+||+||+|.|||+.+- ...|.||||.-|+.-....
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v 345 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV 345 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc
Confidence 3489999999999999652 3578899999998765443
No 323
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.07 E-value=0.0061 Score=56.42 Aligned_cols=72 Identities=13% Similarity=0.066 Sum_probs=43.4
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe--C-C---ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF--H-N---GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~-~---g~v~e~i 115 (359)
..|+.|....||++..... ..+..+.+|...... ......+|..+++.+....+.. ++..+ . + .++++|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~--~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDG--KDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVIS-LQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred cccccCCCeEEEEEEEccC--CCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcc-eeeeEecCCCcEEEEEEecc
Confidence 4577888899999975321 135778888765321 1122347888888886655543 22222 1 2 2678887
Q ss_pred cC
Q 018207 116 NA 117 (359)
Q Consensus 116 ~G 117 (359)
++
T Consensus 83 ~~ 84 (317)
T cd07868 83 EH 84 (317)
T ss_pred CC
Confidence 65
No 324
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.07 E-value=0.0051 Score=55.82 Aligned_cols=136 Identities=19% Similarity=0.186 Sum_probs=74.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccc-cchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVF-FDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~ 114 (359)
+.++.|....+|++.... .+..+++|+..... ... .....|..+++.+....+ ++++.... + .++++|
T Consensus 5 ~~l~~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-v~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 5 EKIGEGTYGVVYKARDKL----TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI-VRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred eEecCCCCeEEEEEEEcC----CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCc-cCHhheeccCCeEEEEEec
Confidence 557778888999987542 36889999875432 111 112357777777653333 34443332 2 278888
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
+++ ++. ..+ +.... .. .. ......+.. .+.+.+..|.
T Consensus 80 ~~~-~l~--------------~~~---~~~~~--~~-~~-~~~~~~~~~-----------------~i~~~L~~lH---- 116 (283)
T cd07835 80 LDL-DLK--------------KYM---DSSPL--TG-LD-PPLIKSYLY-----------------QLLQGIAYCH---- 116 (283)
T ss_pred cCc-CHH--------------HHH---hhCCC--CC-CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 753 221 001 11100 00 00 111111111 1112222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 117 ----~~~~~H~dl~p~nil~~~~-~~~~l~df~~~~ 147 (283)
T cd07835 117 ----SHRVLHRDLKPQNLLIDRE-GALKLADFGLAR 147 (283)
T ss_pred ----HCCeeCCCCCHHHEEEcCC-CcEEEeeccccc
Confidence 1368999999999999985 789999998875
No 325
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.07 E-value=0.00094 Score=61.30 Aligned_cols=135 Identities=15% Similarity=0.165 Sum_probs=74.0
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i 115 (359)
...|+.|....+|++.... .+..+++|........ ......|..+++.+...++.+ ++... .+ .+++||+
T Consensus 27 ~~~lg~g~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~-~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKH----TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVD-MYNSYLVGDELWVVMEFL 101 (292)
T ss_pred hhcccCCCCeEEEEEEECC----CCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHH-HHHheecCCeEEEEEeCC
Confidence 4557778888999987542 3678888876533211 111235666666664433322 22222 22 3899999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|..+.. . +. .... . ......+.. .+...+..|.+
T Consensus 102 ~~~~L~~-------~-------~~---~~~l------~-~~~~~~~~~-----------------qi~~~l~~LH~---- 136 (292)
T cd06658 102 EGGALTD-------I-------VT---HTRM------N-EEQIATVCL-----------------SVLRALSYLHN---- 136 (292)
T ss_pred CCCcHHH-------H-------Hh---cCCC------C-HHHHHHHHH-----------------HHHHHHHHHHH----
Confidence 8865421 1 10 0000 0 111111111 11122222221
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 137 ----~~ivH~dlkp~Nill~~~-~~~kL~dfg~~~ 166 (292)
T cd06658 137 ----QGVIHRDIKSDSILLTSD-GRIKLSDFGFCA 166 (292)
T ss_pred ----CCEeecCCCHHHEEEcCC-CCEEEccCcchh
Confidence 258999999999999886 789999999764
No 326
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.06 E-value=0.0035 Score=59.01 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=46.8
Q ss_pred EEEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEe--CC---ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN---GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~---g~v~ 112 (359)
.+.|+.|....+|++...... ...++.+.+|+...... .......|..++..+..+....+++... .+ .+++
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEE
Confidence 456777888999998632110 01256788888754321 1111236888887775543344455432 22 3789
Q ss_pred EeecCCCC
Q 018207 113 EFINARTL 120 (359)
Q Consensus 113 e~i~G~~l 120 (359)
||++|..|
T Consensus 92 ey~~~g~L 99 (343)
T cd05103 92 EFCKFGNL 99 (343)
T ss_pred eccCCCcH
Confidence 99998665
No 327
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.06 E-value=0.0017 Score=60.03 Aligned_cols=30 Identities=33% Similarity=0.510 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.+.||+.+..
T Consensus 135 ~i~H~dl~p~nil~~~~-~~~kl~dfg~~~~ 164 (308)
T cd06634 135 NMIHRDVKAGNILLSEP-GLVKLGDFGSASI 164 (308)
T ss_pred CcccCCCCHHhEEECCC-CcEEECCccccee
Confidence 68999999999999886 7899999987664
No 328
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.06 E-value=0.0047 Score=55.23 Aligned_cols=29 Identities=21% Similarity=0.417 Sum_probs=25.6
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.+.||..+.
T Consensus 115 ~i~H~dlkp~nill~~~-~~~kl~Dfg~~~ 143 (257)
T cd05116 115 NFVHRDLAARNVLLVTQ-HYAKISDFGLSK 143 (257)
T ss_pred CEeecccchhhEEEcCC-CeEEECCCcccc
Confidence 58999999999999986 678899998765
No 329
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.06 E-value=0.0044 Score=56.20 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=26.4
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||+.+..
T Consensus 144 ~i~H~dlkp~Nil~~~~-~~~~L~dfg~~~~ 173 (283)
T cd05048 144 HFVHRDLAARNCLVGEG-LTVKISDFGLSRD 173 (283)
T ss_pred CeeccccccceEEEcCC-CcEEECCCcceee
Confidence 68999999999999986 7789999987754
No 330
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.05 E-value=0.0021 Score=57.83 Aligned_cols=29 Identities=28% Similarity=0.434 Sum_probs=25.1
Q ss_pred eEEeccCCCCCeeEeCCCC-----ceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTK-----SITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~-----~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ + .+.++||..+.
T Consensus 126 ~i~H~dl~p~nil~~~~-~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 126 HFIHRDLAARNCLVSEK-GYDADRVVKIGDFGLAR 159 (269)
T ss_pred CcccCCCChheEEEecC-CCCCCcceEECCccccc
Confidence 58999999999999875 4 68899998775
No 331
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.05 E-value=0.0046 Score=56.21 Aligned_cols=30 Identities=30% Similarity=0.387 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.+.||..+..
T Consensus 144 ~i~H~dlkp~nili~~~-~~~kl~dfg~~~~ 173 (283)
T cd05090 144 FFVHKDLAARNILIGEQ-LHVKISDLGLSRE 173 (283)
T ss_pred CeehhccccceEEEcCC-CcEEecccccccc
Confidence 69999999999999986 6789999997754
No 332
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.04 E-value=0.0045 Score=55.20 Aligned_cols=32 Identities=19% Similarity=0.121 Sum_probs=26.1
Q ss_pred eeEEeccCCCCCeeEeCCCC------ceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTK------SITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~------~v~lIDwE~a~~ 231 (359)
..++|+|++|.||+++.++. .+.+.||..+..
T Consensus 120 ~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 120 KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred CCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 36899999999999987521 488999998765
No 333
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.04 E-value=0.0025 Score=59.74 Aligned_cols=30 Identities=20% Similarity=0.420 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 126 ~ivH~dlkp~Nill~~~-~~~kl~dfg~~~~ 155 (336)
T cd07849 126 NVLHRDLKPSNLLLNTN-CDLKICDFGLARI 155 (336)
T ss_pred CeeccCCCHHHEEECCC-CCEEECcccceee
Confidence 58999999999999986 7899999987643
No 334
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.03 E-value=0.0058 Score=55.48 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=75.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cc-cchHHHHHHHHHHhcCCCCceeEEEeCC----ceEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VF-FDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVE 112 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~ 112 (359)
.++.++.|....+|++.... .+..+++|....... .. .....|.++++.+...++. +++....+ .+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKL----TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV-KLLDVIHTENKLYLVF 78 (284)
T ss_pred eeeeecCCCceEEEEEEECC----CCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCc-chhhhcccCCcEEEEe
Confidence 35667888889999997542 367888887753321 11 1224688888777544333 33333221 3788
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||+++ .+. .. ++.... .. .. ......+.. .+...+..|.
T Consensus 79 e~~~~-~l~--------------~~---~~~~~~--~~-l~-~~~~~~~~~-----------------~i~~~l~~lh-- 117 (284)
T cd07860 79 EFLHQ-DLK--------------KF---MDASPL--SG-IP-LPLIKSYLF-----------------QLLQGLAFCH-- 117 (284)
T ss_pred ecccc-CHH--------------HH---HHhCCC--CC-CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 88754 221 01 111110 00 00 111111211 1122222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.+.||..+.
T Consensus 118 ------~~~i~H~~l~p~nill~~~-~~~~l~dfg~~~ 148 (284)
T cd07860 118 ------SHRVLHRDLKPQNLLINTE-GAIKLADFGLAR 148 (284)
T ss_pred ------HCCeecCCCCHHHEEECCC-CCEEEeeccchh
Confidence 2268999999999999986 789999998764
No 335
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.03 E-value=0.011 Score=52.79 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=77.5
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--c-cccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--E-VFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~-~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
++.++.|..+.+|.+.... .+..+++|...... . .......|..+++.+...++ ++++..... .+++|
T Consensus 5 ~~~lg~g~~g~~~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKE----DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI-VQYQESFEENGNLYIVMD 79 (256)
T ss_pred EEEeccCCceEEEEEEEcC----CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCe-eeeEeeecCCCeEEEEEe
Confidence 4667778888999987542 36788888764321 1 11112356677776654333 344444432 27899
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|.++.. .+. ... ....+ ......|..+ +...+..+.
T Consensus 80 ~~~~~~l~~--------------~~~---~~~--~~~~~--~~~~~~~~~~-----------------l~~~l~~lh--- 118 (256)
T cd08218 80 YCEGGDLYK--------------KIN---AQR--GVLFP--EDQILDWFVQ-----------------ICLALKHVH--- 118 (256)
T ss_pred cCCCCcHHH--------------HHH---hcc--CCCCC--HHHHHHHHHH-----------------HHHHHHHHH---
Confidence 998865421 111 000 00001 1112222211 112222221
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 119 -----~~~i~h~~l~~~nil~~~~-~~~~l~d~~~~~~ 150 (256)
T cd08218 119 -----DRKILHRDIKSQNIFLTKD-GTIKLGDFGIARV 150 (256)
T ss_pred -----hCCEecCCCCHHHEEEcCC-CCEEEeeccceee
Confidence 2368999999999999886 7899999988764
No 336
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.02 E-value=0.0046 Score=56.67 Aligned_cols=30 Identities=23% Similarity=0.454 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 150 ~i~H~dlkp~Nili~~~-~~~~l~dfg~~~~ 179 (296)
T cd05095 150 NFVHRDLATRNCLVGKN-YTIKIADFGMSRN 179 (296)
T ss_pred CeecccCChheEEEcCC-CCEEeccCccccc
Confidence 68999999999999876 7899999988763
No 337
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.02 E-value=0.0058 Score=54.91 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=73.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc-ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV-FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~i~ 116 (359)
+.|+.|....+|++.... .+..+++|+....... ......|..+++.+...++.+ ++... .+ .+++||++
T Consensus 15 ~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~-~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 15 QRIGSGTYGDVYKARNVN----TGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVA-YFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHhCCCCCeEEEEEEEcC----CCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeee-EEEEEEeCCEEEEEEeccC
Confidence 345667788899987542 3678889887543211 111235666666664333333 33222 22 37899998
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+.. .+ .. .. . .+ ...+.... ..+...+..+.
T Consensus 90 ~~~L~~-------~~-------~~---~~----~-~~-~~~~~~~~-----------------~~i~~~l~~lH------ 123 (267)
T cd06645 90 GGSLQD-------IY-------HV---TG----P-LS-ESQIAYVS-----------------RETLQGLYYLH------ 123 (267)
T ss_pred CCcHHH-------HH-------Hh---cC----C-CC-HHHHHHHH-----------------HHHHHHHHHHH------
Confidence 865531 11 00 00 0 00 01111111 01112222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++.+ +.+.++||..+.
T Consensus 124 --~~~i~H~dlkp~nili~~~-~~~~l~dfg~~~ 154 (267)
T cd06645 124 --SKGKMHRDIKGANILLTDN-GHVKLADFGVSA 154 (267)
T ss_pred --HCCeecCCCCHHHEEECCC-CCEEECcceeee
Confidence 1268999999999999876 789999998765
No 338
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.99 E-value=0.0061 Score=57.03 Aligned_cols=80 Identities=15% Similarity=0.188 Sum_probs=46.3
Q ss_pred EEEecCCcceeEEEEEeCCCCC---CCCcEEEEEEeCCCc-cc-ccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTE---TFSHKVLLRVYGEGV-EV-FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~---~~~~~~vlRi~~~~~-~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v 111 (359)
.+.|+.|....+|.+....... .....+.+|+..... .. ......|..+++.+..+....+++..+. + .++
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVL 96 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEE
Confidence 4567778888999986432110 112367788765432 11 1122467888887755544445555443 2 378
Q ss_pred EEeecCCCC
Q 018207 112 EEFINARTL 120 (359)
Q Consensus 112 ~e~i~G~~l 120 (359)
+||++|.+|
T Consensus 97 ~e~~~~g~L 105 (334)
T cd05100 97 VEYASKGNL 105 (334)
T ss_pred EecCCCCcH
Confidence 999987554
No 339
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=96.98 E-value=0.0029 Score=57.88 Aligned_cols=29 Identities=21% Similarity=0.423 Sum_probs=25.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.++||+.+.
T Consensus 126 ~i~H~dl~p~nili~~~-~~~~l~d~g~~~ 154 (293)
T cd07843 126 WILHRDLKTSNLLLNNR-GILKICDFGLAR 154 (293)
T ss_pred CeeeccCCHHHEEECCC-CcEEEeecCcee
Confidence 58999999999999986 788999998665
No 340
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=96.97 E-value=0.00071 Score=61.01 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=75.7
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cccc--hHHHHHHHHHHhcCCCCceeEEEeCC---ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VFFD--RNDEIRTFEFMSKHGQGPRLLGRFHN---GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~~d--r~~E~~~l~~l~~~gl~P~~~~~~~~---g~v~e~i 115 (359)
-.++.|....+|+++..+ .|+-+-+|.+-+..+ ..+. .-+|+++|+.|..-.++--+-..-.. -+|+||+
T Consensus 8 gkvGEGSYGvV~KCrnk~----TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~ 83 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKD----TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC 83 (396)
T ss_pred hccccCcceEEEEeccCC----cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence 346779999999998653 356666777754422 2222 13688888888765443211111111 1677777
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+-..|+. |-.. |.. .| .+.+.+++-+ +.+.+..
T Consensus 84 dhTvL~e------------------Le~~--p~G-~~--~~~vk~~l~Q-----------------~l~ai~~------- 116 (396)
T KOG0593|consen 84 DHTVLHE------------------LERY--PNG-VP--SELVKKYLYQ-----------------LLKAIHF------- 116 (396)
T ss_pred chHHHHH------------------HHhc--cCC-CC--HHHHHHHHHH-----------------HHHHhhh-------
Confidence 6543321 0000 100 01 0122222211 1111111
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
-...-++|+|++|.|||++.+ +.+.+-||.+|..
T Consensus 117 -cHk~n~IHRDIKPENILit~~-gvvKLCDFGFAR~ 150 (396)
T KOG0593|consen 117 -CHKNNCIHRDIKPENILITQN-GVVKLCDFGFART 150 (396)
T ss_pred -hhhcCeecccCChhheEEecC-CcEEeccchhhHh
Confidence 122358999999999999986 7889999999863
No 341
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=96.96 E-value=0.011 Score=53.58 Aligned_cols=142 Identities=17% Similarity=0.232 Sum_probs=76.6
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC---CceEEEee
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH---NGRVEEFI 115 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~---~g~v~e~i 115 (359)
.+.|+.|....+|+.............+.+|........ ......|..+++.+...++.+ ++.... ...++||.
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~v~e~~ 90 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR-LLGICLSSQVQLITQLM 90 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcce-EEEEEecCceEEEEecC
Confidence 356777888999998754211001235777776543211 111235777777665444433 333322 24789998
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
+|.++.. . ++..... .. ...+..|.. .+...+..|.
T Consensus 91 ~~g~L~~-------~----------l~~~~~~----~~-~~~~~~~~~-----------------qi~~~l~~LH----- 126 (279)
T cd05057 91 PLGCLLD-------Y----------VRNHKDN----IG-SQYLLNWCV-----------------QIAKGMSYLE----- 126 (279)
T ss_pred CCCcHHH-------H----------HHhccCC----CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8765431 0 1111000 00 111222221 1222222222
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.|+||..+..
T Consensus 127 ---~~~i~H~di~p~nil~~~~-~~~kL~dfg~~~~ 158 (279)
T cd05057 127 ---EKRLVHRDLAARNVLVKTP-QHVKITDFGLAKL 158 (279)
T ss_pred ---hCCEEecccCcceEEEcCC-CeEEECCCccccc
Confidence 1478999999999999876 7889999998764
No 342
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.96 E-value=0.01 Score=53.73 Aligned_cols=137 Identities=15% Similarity=0.198 Sum_probs=74.9
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccccchHHHHHHHHHHhcCCCCceeEEEe--C--C--ceEE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVFFDRNDEIRTFEFMSKHGQGPRLLGRF--H--N--GRVE 112 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~--g~v~ 112 (359)
+..++.|..+.+|++.... .+..+.+|...... ........|...+..+..+.-.++++... . + .+|+
T Consensus 4 ~~~lg~g~~~~v~~~~~~~----~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRK----TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred EeeccccccceEEEEEEcC----CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 3556777788999997542 36788888875431 11122335666666665444444455443 2 1 2788
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||.+|..+ ..+ ..... +.....+..+.. .+...+..|.
T Consensus 80 e~~~~~l~-----------~~l-------~~~~~-----~~~~~~~~~~~~-----------------qi~~~L~~LH-- 117 (282)
T cd07831 80 ELMDMNLY-----------ELI-------KGRKR-----PLPEKRVKSYMY-----------------QLLKSLDHMH-- 117 (282)
T ss_pred ecCCccHH-----------HHH-------HhccC-----CCCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 88865211 111 10000 000111111111 1112222222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||++++ +.+.+.||..+..
T Consensus 118 ------~~~i~H~dl~p~ni~l~~--~~~kl~dfg~~~~ 148 (282)
T cd07831 118 ------RNGIFHRDIKPENILIKD--DILKLADFGSCRG 148 (282)
T ss_pred ------HCCceecccCHHHEEEcC--CCeEEEecccccc
Confidence 226899999999999987 6899999987753
No 343
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=96.96 E-value=0.0092 Score=55.00 Aligned_cols=142 Identities=13% Similarity=0.130 Sum_probs=76.8
Q ss_pred EEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCcc-c-ccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVE-V-FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
+.|+.|....+|++...... ...+..+.+|....... . ......|..+++.+..+.-..+++..+. + .+++||
T Consensus 41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 120 (302)
T cd05055 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEY 120 (302)
T ss_pred ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEc
Confidence 45666778899988642110 11245677887654321 1 1112468888888855444455554442 2 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
.+|.+|.. .+ +...... .. ...+..+.. .+...+..+.
T Consensus 121 ~~~~~L~~--------------~i---~~~~~~~---l~-~~~~~~i~~-----------------~i~~~l~~lH---- 158 (302)
T cd05055 121 CCYGDLLN--------------FL---RRKRESF---LT-LEDLLSFSY-----------------QVAKGMAFLA---- 158 (302)
T ss_pred CCCCcHHH--------------HH---HhCCCCC---CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865421 11 1110000 00 111111111 1222222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 159 ----~~~ivH~dlkp~Nil~~~~-~~~~l~dfg~~~ 189 (302)
T cd05055 159 ----SKNCIHRDLAARNVLLTHG-KIVKICDFGLAR 189 (302)
T ss_pred ----HCCeehhhhccceEEEcCC-CeEEECCCcccc
Confidence 2268999999999999875 678899998775
No 344
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.96 E-value=0.0068 Score=56.68 Aligned_cols=29 Identities=31% Similarity=0.439 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|+||+++++ +.+.+.||..+.
T Consensus 139 ~i~H~dl~~~nill~~~-~~~kl~dfg~~~ 167 (335)
T PTZ00024 139 YFMHRDLSPANIFINSK-GICKIADFGLAR 167 (335)
T ss_pred CeecccccHHHeEECCC-CCEEECCcccee
Confidence 68999999999999886 788999998775
No 345
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=96.94 E-value=0.0039 Score=58.58 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=27.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|++|.|||++++ +.+.|+||..+..
T Consensus 192 ~~ivHrDikp~Nill~~~-~~vkL~DfG~a~~ 222 (337)
T cd05054 192 RKCIHRDLAARNILLSEN-NVVKICDFGLARD 222 (337)
T ss_pred CCeecCCCCcceEEEeCC-CcEEEeccccchh
Confidence 478999999999999986 7899999997753
No 346
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=96.94 E-value=0.0091 Score=54.78 Aligned_cols=30 Identities=23% Similarity=0.422 Sum_probs=26.1
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 138 ~~ivH~dlkp~Nill~~~-~~~kl~dfg~~~ 167 (297)
T cd05089 138 KQFIHRDLAARNVLVGEN-LASKIADFGLSR 167 (297)
T ss_pred CCcccCcCCcceEEECCC-CeEEECCcCCCc
Confidence 378999999999999886 788999998764
No 347
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.94 E-value=0.0033 Score=61.06 Aligned_cols=140 Identities=14% Similarity=0.193 Sum_probs=79.8
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC----cccccchHHHHHHHHHHhcCCCC---ceeEEEeCCceEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG----VEVFFDRNDEIRTFEFMSKHGQG---PRLLGRFHNGRVE 112 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~----~~~~~dr~~E~~~l~~l~~~gl~---P~~~~~~~~g~v~ 112 (359)
..+.++.|.|..+|...-.. .+..+.+|..... .+.++ +|..+++-+....++ -..+..++-|.||
T Consensus 277 ~~~kigqgaSG~vy~A~~~~----~~~~VaiK~m~l~~Q~~keLil---nEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 277 DFKKIGQGATGGVYVARKIS----TKQEVAIKRMDLRKQPKKELLL---NEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred chhhhccccccceeeeeecc----CCceEEEEEEEeccCCchhhhH---HHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 56778889999999886432 2344555544321 12333 577777655543332 1112223457999
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++|-.|+.- +. ... .+ -..+. ..+ .+ ..+.++.|
T Consensus 350 Eym~ggsLTDv-Vt---------------------~~~-~~-E~qIA-------~Ic---------re-~l~aL~fL--- 385 (550)
T KOG0578|consen 350 EYMEGGSLTDV-VT---------------------KTR-MT-EGQIA-------AIC---------RE-ILQGLKFL--- 385 (550)
T ss_pred eecCCCchhhh-hh---------------------ccc-cc-HHHHH-------HHH---------HH-HHHHHHHH---
Confidence 99999877521 00 000 00 00010 000 00 11112222
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHH
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAY 236 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~ 236 (359)
....++|+|++.+|||.+.+ +.+.|.||.+|+...+..
T Consensus 386 -----H~~gIiHrDIKSDnILL~~~-g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 386 -----HARGIIHRDIKSDNILLTMD-GSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred -----HhcceeeeccccceeEeccC-CcEEEeeeeeeecccccc
Confidence 23489999999999999987 789999999998766544
No 348
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=96.92 E-value=0.01 Score=52.76 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 123 ~i~h~~l~~~ni~~~~~-~~~kl~d~g~~~~ 152 (256)
T cd08530 123 KILHRDLKSANILLVAN-DLVKIGDLGISKV 152 (256)
T ss_pred CcccCCCCcceEEEecC-CcEEEeeccchhh
Confidence 68999999999999986 7899999987654
No 349
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=96.91 E-value=0.0056 Score=56.54 Aligned_cols=142 Identities=20% Similarity=0.276 Sum_probs=81.1
Q ss_pred CCeEE-EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--c--cccchHHHHHHHHHHhcCCCCceeEEEeCCc--
Q 018207 37 NSLQV-IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--E--VFFDRNDEIRTFEFMSKHGQGPRLLGRFHNG-- 109 (359)
Q Consensus 37 ~~~~i-~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g-- 109 (359)
+++++ +.|+.|.-..||.|+..+ .++-|-+|+-.+.. + ..-....|..++..+. +-+--++++.++++
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~d----t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKD----TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEK 99 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcc----cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCe
Confidence 44554 556678899999998653 35777787765421 0 0111235777776622 22334566666643
Q ss_pred --eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHH
Q 018207 110 --RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEIS 187 (359)
Q Consensus 110 --~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 187 (359)
+|++|+.|-.|-. .|.+ .+. .. -+..+-|+ .++.-.+.
T Consensus 100 LylVld~~~GGeLf~-----------------hL~~---eg~--F~-E~~arfYl-----------------aEi~lAL~ 139 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFY-----------------HLQR---EGR--FS-EDRARFYL-----------------AEIVLALG 139 (357)
T ss_pred EEEEEeccCCccHHH-----------------HHHh---cCC--cc-hhHHHHHH-----------------HHHHHHHH
Confidence 8999998843310 0000 000 00 01112222 11222222
Q ss_pred HHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 188 TLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 188 ~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
.| ....++|+|++|.|||++.+ |-+.|-||..|..+
T Consensus 140 ~L--------H~~gIiyRDlKPENILLd~~-GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 140 YL--------HSKGIIYRDLKPENILLDEQ-GHIKLTDFGLCKED 175 (357)
T ss_pred HH--------HhCCeeeccCCHHHeeecCC-CcEEEeccccchhc
Confidence 22 23489999999999999997 78999999988743
No 350
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=96.89 E-value=0.01 Score=53.42 Aligned_cols=144 Identities=13% Similarity=0.140 Sum_probs=76.1
Q ss_pred CeEE-EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cc-cchHHHHHHHHHHhcCCCCceeEEEeCC----ce
Q 018207 38 SLQV-IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VF-FDRNDEIRTFEFMSKHGQGPRLLGRFHN----GR 110 (359)
Q Consensus 38 ~~~i-~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~ 110 (359)
.+++ +.|+.|....+|+....... ..+..+.+|....... .. .....|...+..+.. .-.+++++.... .+
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~-~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPS-KRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH-SNIVRLEGVITRGNTMMI 83 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCC-CceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC-CCcCeEEEEEecCCCcEE
Confidence 3444 45677888899987643211 1245677777654321 11 112356666655532 224556655432 38
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
||||++|..+.. . +.+ +.... . ...+..+.. .+...+..|.
T Consensus 84 v~e~~~~~~L~~-------~-------l~~-~~~~l------~-~~~~~~~~~-----------------~i~~al~~lH 124 (266)
T cd05064 84 VTEYMSNGALDS-------F-------LRK-HEGQL------V-AGQLMGMLP-----------------GLASGMKYLS 124 (266)
T ss_pred EEEeCCCCcHHH-------H-------HHh-CCCCC------C-HHHHHHHHH-----------------HHHHHHHHHH
Confidence 999999875531 1 111 10000 0 111212221 1222222232
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++++ +.+.+.||..+..
T Consensus 125 --------~~~iiH~dikp~nili~~~-~~~~l~dfg~~~~ 156 (266)
T cd05064 125 --------EMGYVHKGLAAHKVLVNSD-LVCKISGFRRLQE 156 (266)
T ss_pred --------HCCEeeccccHhhEEEcCC-CcEEECCCccccc
Confidence 2258999999999999886 6788999875443
No 351
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.88 E-value=0.0081 Score=56.18 Aligned_cols=136 Identities=17% Similarity=0.168 Sum_probs=74.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccchHHHHHHHHHHhcCCCCceeEEEe-C-C---ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFDRNDEIRTFEFMSKHGQGPRLLGRF-H-N---GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~l~~l~~~gl~P~~~~~~-~-~---g~v 111 (359)
-.+.|+.|....+|++.... .+..+++|...... ........|..+++.+...++.+ ++..+ . + .++
T Consensus 14 ~~~~ig~g~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~-~~~~~~~~~~~~~lv 88 (328)
T cd07856 14 DLQPVGMGAFGLVCSARDQL----TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIIS-LSDIFISPLEDIYFV 88 (328)
T ss_pred EEEeecccCCeEEEEEEECC----CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeee-EeeeEecCCCcEEEE
Confidence 45677788889999997542 36788888754321 11112235778887776555544 33322 2 2 267
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
++|.++ .+. ..+ +..+. + ......+.. .+.+.+..|.
T Consensus 89 ~e~~~~-~L~--------------~~~---~~~~~-----~--~~~~~~~~~-----------------ql~~aL~~LH- 125 (328)
T cd07856 89 TELLGT-DLH--------------RLL---TSRPL-----E--KQFIQYFLY-----------------QILRGLKYVH- 125 (328)
T ss_pred eehhcc-CHH--------------HHH---hcCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 887643 111 111 11010 0 011111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 126 -------~~~iiH~dl~p~Nili~~~-~~~~l~dfg~~~~ 157 (328)
T cd07856 126 -------SAGVVHRDLKPSNILINEN-CDLKICDFGLARI 157 (328)
T ss_pred -------hCCcccCCCCHHHEeECCC-CCEEeCccccccc
Confidence 2368999999999999886 7899999987653
No 352
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=96.87 E-value=0.0049 Score=56.69 Aligned_cols=29 Identities=21% Similarity=0.503 Sum_probs=25.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 137 ~ivH~dl~p~Nill~~~-~~~kL~dfg~~~ 165 (297)
T cd06659 137 GVIHRDIKSDSILLTLD-GRVKLSDFGFCA 165 (297)
T ss_pred CeecCCCCHHHeEEccC-CcEEEeechhHh
Confidence 58999999999999986 789999998764
No 353
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=96.86 E-value=0.008 Score=55.48 Aligned_cols=29 Identities=21% Similarity=0.473 Sum_probs=25.6
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|+||+++.+ +.+.+.||+.+.
T Consensus 121 ~ivH~dlk~~Nili~~~-~~~kl~d~~~~~ 149 (314)
T cd08216 121 GFIHRSVKASHILLSGD-GKVVLSGLRYSV 149 (314)
T ss_pred CeecCCCCcceEEEecC-CceEEecCccce
Confidence 58999999999999986 788999998764
No 354
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=96.85 E-value=0.011 Score=55.81 Aligned_cols=30 Identities=27% Similarity=0.524 Sum_probs=26.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 138 gi~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~ 167 (353)
T cd07850 138 GIIHRDLKPSNIVVKSD-CTLKILDFGLART 167 (353)
T ss_pred CeeeCCCCHHHEEECCC-CCEEEccCcccee
Confidence 68999999999999986 7899999988764
No 355
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=96.85 E-value=0.01 Score=53.32 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=26.3
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 133 ~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~ 162 (273)
T cd05035 133 NFIHRDLAARNCMLRED-MTVCVADFGLSKK 162 (273)
T ss_pred CeeccccchheEEECCC-CeEEECCccceee
Confidence 68999999999999886 7899999987653
No 356
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.84 E-value=0.0069 Score=55.52 Aligned_cols=136 Identities=13% Similarity=0.128 Sum_probs=73.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccccc-chHHHHHHHHHHhcCCCCceeEEEe--CC--ceEEEe
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFF-DRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRVEEF 114 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v~e~ 114 (359)
-++.++.|....+|++.... .+..+++|.......... ....|..+++.+...++ ++++... .+ .+|+||
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 23 RFEKIGQGASGTVYTAIDVA----TGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNI-VNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred eeeEecCCCCeEEEEEEEcC----CCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCe-eehhheeeeCCcEEEEEec
Confidence 34667778888999986432 357788888753211111 11345666655543333 2233222 22 489999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|.++.. . +.+ .. .. ...+.... ..+...+..|.
T Consensus 98 ~~~~~L~~-------~-------~~~---~~------l~-~~~~~~i~-----------------~~l~~al~~LH---- 132 (293)
T cd06647 98 LAGGSLTD-------V-------VTE---TC------MD-EGQIAAVC-----------------RECLQALEFLH---- 132 (293)
T ss_pred CCCCcHHH-------H-------Hhh---cC------CC-HHHHHHHH-----------------HHHHHHHHHHH----
Confidence 98865431 1 110 00 00 11111111 11112222221
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 133 ----~~gi~H~dL~p~Nili~~~-~~~kL~dfg~~~ 163 (293)
T cd06647 133 ----SNQVIHRDIKSDNILLGMD-GSVKLTDFGFCA 163 (293)
T ss_pred ----hCCEeeccCCHHHEEEcCC-CCEEEccCccee
Confidence 2258999999999999986 789999998664
No 357
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.83 E-value=0.012 Score=53.53 Aligned_cols=29 Identities=28% Similarity=0.338 Sum_probs=25.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++.+ +.+.++||..+.
T Consensus 117 ~i~H~di~p~nili~~~-~~~kl~dfg~~~ 145 (278)
T cd05606 117 FVVYRDLKPANILLDEH-GHVRISDLGLAC 145 (278)
T ss_pred CEEcCCCCHHHEEECCC-CCEEEccCcCcc
Confidence 59999999999999886 789999998764
No 358
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.83 E-value=0.016 Score=53.34 Aligned_cols=73 Identities=10% Similarity=0.065 Sum_probs=44.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccc-cchHHHHHHHHHHhcCCCCceeEEEe--C--C--ceE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVF-FDRNDEIRTFEFMSKHGQGPRLLGRF--H--N--GRV 111 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~-~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~--g~v 111 (359)
..|+.|....+|++..... +.+..+.+|+..... ... .....|..++..+...++.+ ++... . + .+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~~lv 82 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNG--KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS-LVEVFLEHADKSVYLL 82 (316)
T ss_pred EEeccCCcEEEEEEEecCC--CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccc-eEEEEeCCCCceEEEE
Confidence 4577788899999986421 136889999886532 111 11235777777776555544 33322 2 1 278
Q ss_pred EEeecC
Q 018207 112 EEFINA 117 (359)
Q Consensus 112 ~e~i~G 117 (359)
+||+++
T Consensus 83 ~e~~~~ 88 (316)
T cd07842 83 FDYAEH 88 (316)
T ss_pred EeCCCc
Confidence 998865
No 359
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=96.80 E-value=0.013 Score=56.68 Aligned_cols=79 Identities=13% Similarity=0.081 Sum_probs=47.0
Q ss_pred EEecCCcceeEEEEEeCCCC-CCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeC-C---ceEEEe
Q 018207 42 IPVKGAMTNEVFQIKWLTKT-ETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFH-N---GRVEEF 114 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~-~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~-~---g~v~e~ 114 (359)
+.|+.|....||++...... ...+..+.+|+....... ......|..++..+..+.-..++++.+. + .+|+||
T Consensus 43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~ 122 (401)
T cd05107 43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEY 122 (401)
T ss_pred hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEec
Confidence 56788889999999753110 012457889987643211 1112357777777754433445555443 2 389999
Q ss_pred ecCCCC
Q 018207 115 INARTL 120 (359)
Q Consensus 115 i~G~~l 120 (359)
++|..|
T Consensus 123 ~~~g~L 128 (401)
T cd05107 123 CRYGDL 128 (401)
T ss_pred cCCCcH
Confidence 987654
No 360
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=96.80 E-value=0.014 Score=52.39 Aligned_cols=136 Identities=14% Similarity=0.121 Sum_probs=76.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc------ccccchHHHHHHHHHHhcCCCCceeEEEe--C-C---c
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV------EVFFDRNDEIRTFEFMSKHGQGPRLLGRF--H-N---G 109 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~------~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~-~---g 109 (359)
+.++.|....+|++.... .+..+.+|...... ........|..+++.+...++.+ ++... . + .
T Consensus 8 ~~lg~g~~g~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~-~~~~~~~~~~~~~~ 82 (264)
T cd06653 8 KLLGRGAFGEVYLCYDAD----TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ-YYGCLRDPEEKKLS 82 (264)
T ss_pred eeEccCCCeEEEEEEEcC----CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcce-EEEEEEcCCCCEEE
Confidence 456667788999987542 36788898763211 01112245777888776555543 33332 2 2 2
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
+++||++|.++.. .+.. .. +........+.. .+...+..+
T Consensus 83 ~v~e~~~~~~L~~--------------~~~~---~~------~l~~~~~~~~~~-----------------~i~~al~~L 122 (264)
T cd06653 83 IFVEYMPGGSIKD--------------QLKA---YG------ALTENVTRRYTR-----------------QILQGVSYL 122 (264)
T ss_pred EEEEeCCCCcHHH--------------HHHH---cC------CCCHHHHHHHHH-----------------HHHHHHHHH
Confidence 6889998865421 1110 00 000111111211 111222222
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
. ...++|+|++|+||+++++ +.+.+.||..+..
T Consensus 123 H--------~~~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~ 155 (264)
T cd06653 123 H--------SNMIVHRDIKGANILRDSA-GNVKLGDFGASKR 155 (264)
T ss_pred H--------hCCEecCCCCHHHEEEcCC-CCEEECccccccc
Confidence 1 2268999999999999886 7889999987764
No 361
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.80 E-value=0.017 Score=51.94 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=74.8
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-c-ccchHHHHHHHHHHhcCCCCceeEEEeCC---ceEEEeec
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-V-FFDRNDEIRTFEFMSKHGQGPRLLGRFHN---GRVEEFIN 116 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~l~~l~~~gl~P~~~~~~~~---g~v~e~i~ 116 (359)
+.++.|....+|+....... .....+++|.+..... . ......|..+++.+....+ .+++....+ .+++||.+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~-~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~lv~e~~~ 89 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPE-NEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI-VKLIGVITENPVWIVMELAP 89 (270)
T ss_pred eeeCCccceeEEEEEEecCC-CCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch-hceeEEEcCCCcEEEEEcCC
Confidence 46677778899988653211 1234677887754321 1 1112357777776654333 334444332 48889888
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
|..+.. .+.+ . .. .........+. ..+...+..+.
T Consensus 90 ~~~L~~--------------~l~~---~---~~--~~~~~~~~~~~-----------------~~l~~~l~~lH------ 124 (270)
T cd05056 90 LGELRS--------------YLQV---N---KY--SLDLASLILYS-----------------YQLSTALAYLE------ 124 (270)
T ss_pred CCcHHH--------------HHHh---C---CC--CCCHHHHHHHH-----------------HHHHHHHHHHH------
Confidence 755421 1110 0 00 00011111111 11222222221
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.||+++.+ +.+.++||+.+..
T Consensus 125 --~~~~~H~dl~p~nili~~~-~~~~l~d~g~~~~ 156 (270)
T cd05056 125 --SKRFVHRDIAARNVLVSSP-DCVKLGDFGLSRY 156 (270)
T ss_pred --hCCeeccccChheEEEecC-CCeEEccCceeee
Confidence 2368999999999999986 7899999987754
No 362
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=96.79 E-value=0.013 Score=53.32 Aligned_cols=29 Identities=28% Similarity=0.499 Sum_probs=25.4
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++.+ +.+.++||..+.
T Consensus 128 ~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~ 156 (288)
T cd06616 128 KIIHRDVKPSNILLDRN-GNIKLCDFGISG 156 (288)
T ss_pred CeeccCCCHHHEEEccC-CcEEEeecchhH
Confidence 58999999999999876 678999998654
No 363
>PHA02988 hypothetical protein; Provisional
Probab=96.78 E-value=0.012 Score=53.68 Aligned_cols=73 Identities=12% Similarity=0.243 Sum_probs=46.1
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc---cc-chHHHHHHHHHHhcCCCCceeEEEe----CC----c
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV---FF-DRNDEIRTFEFMSKHGQGPRLLGRF----HN----G 109 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~---~~-dr~~E~~~l~~l~~~gl~P~~~~~~----~~----g 109 (359)
..++.|....+|+.... ++.+++|........ .+ ...+|..++..+....+. ++++.. ++ .
T Consensus 26 ~~i~~g~~~~v~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNIL-KIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEEC------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEE-EEeeeEEecccCCCceE
Confidence 45667778899998753 688999987643211 11 124688888887654433 444432 11 2
Q ss_pred eEEEeecCCCCC
Q 018207 110 RVEEFINARTLS 121 (359)
Q Consensus 110 ~v~e~i~G~~l~ 121 (359)
+++||++|..|.
T Consensus 99 lv~Ey~~~g~L~ 110 (283)
T PHA02988 99 LILEYCTRGYLR 110 (283)
T ss_pred EEEEeCCCCcHH
Confidence 799999987653
No 364
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.78 E-value=0.021 Score=50.26 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=47.3
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEee
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEFI 115 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~i 115 (359)
-++.|+.|.-..+|.-.... .+.++-+|+....... .....|..+.+.|..--=-|.+.+...+ -+||+-+
T Consensus 19 lvrkiGsGSFGdIy~~~~i~----~ge~VAiK~Es~~a~h-pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 19 LVRKIGSGSFGDIYLGISIT----SGEEVAIKLESSKAKH-PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred EEEeecCCchhheeeeeecc----CCceEEEEeecccCCC-cchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence 46788889999999876542 4789999997655322 1223799999988753224777665543 2666654
No 365
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.78 E-value=0.01 Score=55.70 Aligned_cols=30 Identities=30% Similarity=0.593 Sum_probs=26.6
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++.+ +.+.|+||+.+..
T Consensus 137 ~i~H~dlkp~NIll~~~-~~~kL~dfg~~~~ 166 (342)
T cd07879 137 GIIHRDLKPGNLAVNED-CELKILDFGLARH 166 (342)
T ss_pred CcccCCCCHHHEEECCC-CCEEEeeCCCCcC
Confidence 68999999999999986 7899999987754
No 366
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=96.78 E-value=0.0081 Score=54.87 Aligned_cols=29 Identities=24% Similarity=0.486 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.+.||..+.
T Consensus 150 ~i~H~dlkp~Nili~~~-~~~~l~dfg~~~ 178 (296)
T cd05051 150 NFVHRDLATRNCLVGKN-YTIKIADFGMSR 178 (296)
T ss_pred CccccccchhceeecCC-CceEEcccccee
Confidence 68999999999999986 788999998765
No 367
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.76 E-value=0.01 Score=55.48 Aligned_cols=29 Identities=28% Similarity=0.469 Sum_probs=25.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 127 ~i~H~dl~p~nill~~~-~~~kl~d~g~~~ 155 (337)
T cd07852 127 NVIHRDLKPSNILLNSD-CRVKLADFGLAR 155 (337)
T ss_pred CeecCCCCHHHEEEcCC-CcEEEeeccchh
Confidence 68999999999999986 789999998664
No 368
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=96.76 E-value=0.022 Score=51.40 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=26.3
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++++ +.+.+.||..+.
T Consensus 138 ~~i~H~di~p~nill~~~-~~~kl~dfg~~~ 167 (277)
T cd05032 138 KKFVHRDLAARNCMVAED-LTVKIGDFGMTR 167 (277)
T ss_pred CCccccccChheEEEcCC-CCEEECCcccch
Confidence 368999999999999986 788999998765
No 369
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=96.75 E-value=0.0048 Score=55.21 Aligned_cols=29 Identities=34% Similarity=0.555 Sum_probs=25.9
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 118 ~i~H~dlk~~nili~~~-~~~kl~dfg~~~ 146 (262)
T cd05058 118 KFVHRDLAARNCMLDES-FTVKVADFGLAR 146 (262)
T ss_pred CccccccCcceEEEcCC-CcEEECCccccc
Confidence 68999999999999986 678899998775
No 370
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.75 E-value=0.019 Score=53.23 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=75.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc----ccchHHHHHHHHHHhcCCCCceeEEEe--CC--ceE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV----FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN--GRV 111 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~----~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~--g~v 111 (359)
.+..++.|....+|++.... .+..+++|+....... ..+...|..+++.+...++ ++++... .+ .++
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv 99 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSH----TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-IEYKGCYLKEHTAWLV 99 (313)
T ss_pred cceeeccCCCeEEEEEEECC----CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCC-ccEEEEEEeCCEEEEE
Confidence 34568888889999997542 3678888887533211 1112356777776654333 3344333 22 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
+||++|.... . +. -+..+. + ......+.. .+...+..|.
T Consensus 100 ~e~~~~~l~~--------~-------l~-~~~~~l-----~--~~~~~~~~~-----------------qi~~al~~LH- 138 (313)
T cd06633 100 MEYCLGSASD--------L-------LE-VHKKPL-----Q--EVEIAAITH-----------------GALQGLAYLH- 138 (313)
T ss_pred EecCCCCHHH--------H-------HH-hcCCCC-----C--HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 9998762110 0 00 000000 0 111111111 1222222222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 139 -------~~gi~H~dl~p~nili~~~-~~~kL~dfg~~~~ 170 (313)
T cd06633 139 -------SHNMIHRDIKAGNILLTEP-GQVKLADFGSASK 170 (313)
T ss_pred -------HCCeecCCCChhhEEECCC-CCEEEeecCCCcc
Confidence 1268999999999999886 7899999987653
No 371
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=96.72 E-value=0.0088 Score=56.23 Aligned_cols=139 Identities=15% Similarity=0.151 Sum_probs=74.9
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--------cccchHHHHHHHHHHhcCCCCceeEEEe--CC-
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--------VFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN- 108 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--------~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~- 108 (359)
-.+.++.|.-..+-+..-. ..++.+-+|+.+.... ...+..+|..+++.|+.-+++ ++...+ ++
T Consensus 176 i~~~LGsGafg~Vkla~e~----~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV-~~~d~f~~~ds 250 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEK----KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIV-RIKDFFEVPDS 250 (475)
T ss_pred eeeeecCCceeEEEEEEEc----ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEE-EEeeeeecCCc
Confidence 3455555655555444322 1378888998865411 112336899999888754332 222222 22
Q ss_pred -ceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHH
Q 018207 109 -GRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEIS 187 (359)
Q Consensus 109 -g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 187 (359)
++|+||++|-.|- ..++. | .. +.+...+. -+.++...+.
T Consensus 251 ~YmVlE~v~GGeLf----------d~vv~-----n-----k~----l~ed~~K~----------------~f~Qll~avk 290 (475)
T KOG0615|consen 251 SYMVLEYVEGGELF----------DKVVA-----N-----KY----LREDLGKL----------------LFKQLLTAVK 290 (475)
T ss_pred eEEEEEEecCccHH----------HHHHh-----c-----cc----cccchhHH----------------HHHHHHHHHH
Confidence 5999999985431 11111 0 00 00000000 0112222333
Q ss_pred HHHHHHhcCCCceeEEeccCCCCCeeEeCCC--CceEEEEEeeccC
Q 018207 188 TLEKALYRNDQHIGFCHNDLQYGNIMIDEVT--KSITLIDYEYASY 231 (359)
Q Consensus 188 ~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~--~~v~lIDwE~a~~ 231 (359)
.|. ..++||+|++|.|||+..+. -.+.+-||..|..
T Consensus 291 YLH--------~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 291 YLH--------SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred HHH--------HcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 332 34899999999999997642 2355999998876
No 372
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=96.71 E-value=0.01 Score=54.07 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=26.4
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++++ +.+.++||..+.
T Consensus 149 ~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 178 (288)
T cd05050 149 RKFVHRDLATRNCLVGEN-MVVKIADFGLSR 178 (288)
T ss_pred CCeecccccHhheEecCC-CceEECccccce
Confidence 379999999999999886 788999998765
No 373
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=96.70 E-value=0.031 Score=50.57 Aligned_cols=30 Identities=23% Similarity=0.425 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++++ +.+.|+||..+..
T Consensus 127 ~i~h~~l~~~nili~~~-~~~~l~dfg~~~~ 156 (287)
T cd07838 127 RIVHRDLKPQNILVTSD-GQVKIADFGLARI 156 (287)
T ss_pred CeeeccCChhhEEEccC-CCEEEeccCccee
Confidence 58999999999999987 7899999987644
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.69 E-value=0.012 Score=54.91 Aligned_cols=29 Identities=24% Similarity=0.507 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|+||+++++ +.+.|+||..+.
T Consensus 125 givH~dlkp~Nili~~~-~~~kl~Dfg~a~ 153 (332)
T cd07857 125 NVLHRDLKPGNLLVNAD-CELKICDFGLAR 153 (332)
T ss_pred CcccCCCCHHHeEEcCC-CCEEeCcCCCce
Confidence 68999999999999986 789999998775
No 375
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=96.63 E-value=0.028 Score=59.74 Aligned_cols=76 Identities=17% Similarity=0.106 Sum_probs=46.6
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--cc-ccchHHHHHHHHHHhcCCCCceeEEEe--C-C---ce
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EV-FFDRNDEIRTFEFMSKHGQGPRLLGRF--H-N---GR 110 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~-~~dr~~E~~~l~~l~~~gl~P~~~~~~--~-~---g~ 110 (359)
-+..|+.|....||++.... .+..+++|+..... .. ......|+.+++.|....+++ ++..+ . + .+
T Consensus 17 Il~kLG~GgFGtVYLAkdk~----tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVr-l~d~f~de~~~~lyI 91 (1021)
T PTZ00266 17 VIKKIGNGRFGEVFLVKHKR----TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVR-YIDRFLNKANQKLYI 91 (1021)
T ss_pred EEEEEecCCCeEEEEEEECC----CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCe-EEEEEEecCCCEEEE
Confidence 35667778889999998653 25677778764321 11 111235788888776555543 34332 2 2 37
Q ss_pred EEEeecCCCC
Q 018207 111 VEEFINARTL 120 (359)
Q Consensus 111 v~e~i~G~~l 120 (359)
||||++|.+|
T Consensus 92 VMEY~~gGSL 101 (1021)
T PTZ00266 92 LMEFCDAGDL 101 (1021)
T ss_pred EEeCCCCCcH
Confidence 9999998665
No 376
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.60 E-value=0.025 Score=51.87 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++.+ +.+.+.||+.+..
T Consensus 139 ~i~H~dl~p~nil~~~~-~~~kl~dfg~~~~ 168 (310)
T cd07865 139 KILHRDMKAANILITKD-GILKLADFGLARA 168 (310)
T ss_pred CeeccCCCHHHEEECCC-CcEEECcCCCccc
Confidence 68999999999999986 7889999997753
No 377
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.57 E-value=0.023 Score=51.49 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=26.4
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 144 gi~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~ 173 (283)
T cd05091 144 HVVHKDLATRNVLVFDK-LNVKISDLGLFRE 173 (283)
T ss_pred CccccccchhheEecCC-CceEecccccccc
Confidence 68999999999999986 7899999997653
No 378
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=96.56 E-value=0.018 Score=51.82 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=23.8
Q ss_pred eeEEeccCCCCCeeEeCCCC------ceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTK------SITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~------~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++.++. .+.++||..+.
T Consensus 124 ~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 124 KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred CCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 36899999999999976421 26788988664
No 379
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.56 E-value=0.031 Score=55.57 Aligned_cols=29 Identities=21% Similarity=0.415 Sum_probs=25.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 163 ~IiHrDLKP~NILl~~~-~~vkL~DFGls~ 191 (496)
T PTZ00283 163 HMIHRDIKSANILLCSN-GLVKLGDFGFSK 191 (496)
T ss_pred CEecCCCCHHHEEEeCC-CCEEEEecccCe
Confidence 68999999999999986 789999998753
No 380
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.55 E-value=0.027 Score=51.85 Aligned_cols=31 Identities=19% Similarity=0.422 Sum_probs=26.8
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|++|.||+++++ +.+.|+||..+..
T Consensus 128 ~~ivH~dikp~Nill~~~-~~~kL~Dfg~~~~ 158 (303)
T cd05110 128 RRLVHRDLAARNVLVKSP-NHVKITDFGLARL 158 (303)
T ss_pred cCeeccccccceeeecCC-CceEEcccccccc
Confidence 368999999999999876 6799999987764
No 381
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=96.55 E-value=0.03 Score=50.46 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=25.4
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.|||++.+ +.+.++||..+.
T Consensus 119 ~i~H~dikp~nil~~~~-~~~~l~Dfg~~~ 147 (268)
T cd05086 119 NFLHSDLALRNCFLTSD-LTVKVGDYGIGP 147 (268)
T ss_pred CeeccCCccceEEEcCC-ccEEeccccccc
Confidence 58999999999999886 778999998764
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=96.52 E-value=0.019 Score=50.02 Aligned_cols=33 Identities=33% Similarity=0.476 Sum_probs=28.8
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
.++|||++|+||+++++ +.+.++||+.+.....
T Consensus 107 ~i~h~~i~~~ni~~~~~-~~~~l~d~~~~~~~~~ 139 (244)
T smart00220 107 GIIHRDLKPENILLDED-GHVKLADFGLARQLDP 139 (244)
T ss_pred CeecCCcCHHHeEECCC-CcEEEccccceeeecc
Confidence 78999999999999986 7899999998876544
No 383
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.51 E-value=0.0014 Score=56.95 Aligned_cols=41 Identities=27% Similarity=0.487 Sum_probs=33.5
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHh
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYD 237 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~D 237 (359)
-...++.|+|.+|.|+|++....++.+|||..|-.-.|..|
T Consensus 148 CHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e 188 (338)
T KOG0668|consen 148 CHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188 (338)
T ss_pred HHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce
Confidence 34568999999999999998778899999998876555433
No 384
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.50 E-value=0.013 Score=54.54 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=27.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
.++|+|++|.||+++++ +.+.|+||..+...
T Consensus 123 gi~H~dlkp~nili~~~-~~~~L~dfg~~~~~ 153 (330)
T cd07834 123 NVIHRDLKPSNILVNSN-CDLKICDFGLARGV 153 (330)
T ss_pred CeecCCCCHHHEEEcCC-CCEEEcccCceEee
Confidence 68999999999999986 78999999877643
No 385
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=96.47 E-value=0.044 Score=52.01 Aligned_cols=137 Identities=16% Similarity=0.233 Sum_probs=77.5
Q ss_pred ecCCcceeEEEEEeCCCCCCCCcE-EEEEEeCCCc-cc--ccchHHHHHHHHHHhcCCCCceeEEEe--CC---ceEEEe
Q 018207 44 VKGAMTNEVFQIKWLTKTETFSHK-VLLRVYGEGV-EV--FFDRNDEIRTFEFMSKHGQGPRLLGRF--HN---GRVEEF 114 (359)
Q Consensus 44 l~gG~~N~~y~v~~~~~~~~~~~~-~vlRi~~~~~-~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~---g~v~e~ 114 (359)
++.|.-..+|+.... +.. +.+|+..... .. .-+..+|+.++..|..-.++. +++.. +. ++|+||
T Consensus 49 iG~G~~g~V~~~~~~------g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~-f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWR------GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQ-FYGACTSPPGSLCIVTEY 121 (362)
T ss_pred cccCCceeEEEEEeC------CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCCceEEEEEe
Confidence 666888999998864 445 7788876542 11 112246888887766544443 55544 22 489999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
++|-.|.. -+|... . ..... ...-.|.- ++.+-+..|.
T Consensus 122 ~~~GsL~~-----------------~l~~~~--~-~~l~~-~~~l~~al-----------------diArGm~YLH---- 159 (362)
T KOG0192|consen 122 MPGGSLSV-----------------LLHKKR--K-RKLPL-KVRLRIAL-----------------DIARGMEYLH---- 159 (362)
T ss_pred CCCCcHHH-----------------HHhhcc--c-CCCCH-HHHHHHHH-----------------HHHHHHHHHh----
Confidence 99876531 112110 0 00111 11111111 1112222222
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
...+ ++|+||++.|||++.+...+.|=||..+..-
T Consensus 160 -~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 160 -SEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred -cCCC--eeecccChhhEEEcCCCCEEEECCCccceee
Confidence 1223 9999999999999986226789999988543
No 386
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.47 E-value=0.0092 Score=57.05 Aligned_cols=140 Identities=20% Similarity=0.204 Sum_probs=82.9
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc----cccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE----VFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e 113 (359)
+.++.|.-..+|++.... .++.+-+|+-..... ..-+..+|.++++.++.+...-.+...++ + .+|||
T Consensus 41 ~~lG~G~Fg~v~~~~~~~----tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmE 116 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKS----TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVME 116 (382)
T ss_pred hhhCCCCceEEEEEEecC----CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEE
Confidence 467789999999998653 267777776543311 11234689999999986433333333332 2 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
.+.|-.| ...+.+. | .. +.+ ..... ..+...+..+
T Consensus 117 L~~GGeL----------fd~i~~~----~---~s---E~d----a~~~~-----------------~~il~av~~l---- 151 (382)
T KOG0032|consen 117 LCEGGEL----------FDRIVKK----H---YS---ERD----AAGII-----------------RQILEAVKYL---- 151 (382)
T ss_pred ecCCchH----------HHHHHHc----c---CC---HHH----HHHHH-----------------HHHHHHHHHH----
Confidence 9987433 2333333 2 10 000 00000 1111222222
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCC---CceEEEEEeeccCCch
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVT---KSITLIDYEYASYNPV 234 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~---~~v~lIDwE~a~~~~~ 234 (359)
+..+++|+|++|.|+|+.... +.+.++||..|....+
T Consensus 152 ----H~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 152 ----HSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred ----HhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 126999999999999997642 3689999999988776
No 387
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=96.46 E-value=0.016 Score=54.50 Aligned_cols=30 Identities=23% Similarity=0.452 Sum_probs=26.3
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 140 ~ivH~dlkp~NIll~~~-~~~kl~dfg~~~~ 169 (345)
T cd07877 140 DIIHRDLKPSNLAVNED-CELKILDFGLARH 169 (345)
T ss_pred CeeecCCChHHEEEcCC-CCEEEeccccccc
Confidence 68999999999999986 7899999987653
No 388
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=96.43 E-value=0.029 Score=50.88 Aligned_cols=30 Identities=20% Similarity=0.391 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 129 ~iiH~dlkp~nili~~~-~~~kl~Dfg~~~~ 158 (279)
T cd05111 129 RMVHRNLAARNILLKSD-SIVQIADFGVADL 158 (279)
T ss_pred CEeccccCcceEEEcCC-CcEEEcCCcccee
Confidence 58999999999999886 7889999987753
No 389
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.42 E-value=0.013 Score=54.71 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=25.9
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++++ +.+.|.||..+.
T Consensus 127 ~ivH~dlkp~Nil~~~~-~~~kl~dfg~~~ 155 (334)
T cd07855 127 NVIHRDLKPSNLLVNED-CELRIGDFGMAR 155 (334)
T ss_pred CeecCCCCHHHEEEcCC-CcEEecccccce
Confidence 58999999999999986 789999998764
No 390
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.40 E-value=0.0096 Score=58.00 Aligned_cols=28 Identities=32% Similarity=0.619 Sum_probs=24.9
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
+++|.||+|.|+|+-. |.+.||||.-|.
T Consensus 480 gIVHSDLKPANFLlVk--G~LKLIDFGIA~ 507 (677)
T KOG0596|consen 480 GIVHSDLKPANFLLVK--GRLKLIDFGIAN 507 (677)
T ss_pred ceeecCCCcccEEEEe--eeEEeeeechhc
Confidence 8999999999999986 799999998544
No 391
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=96.37 E-value=0.0084 Score=59.92 Aligned_cols=141 Identities=18% Similarity=0.222 Sum_probs=77.2
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-ccccch-HHHHHHHHHHhcCCCC-------ceeEEEeC--Cce
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EVFFDR-NDEIRTFEFMSKHGQG-------PRLLGRFH--NGR 110 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~~~dr-~~E~~~l~~l~~~gl~-------P~~~~~~~--~g~ 110 (359)
+.++.|.+..||+-+... .|+.+-+|..+... ....+| -+|+++++.|....++ +...+... .-+
T Consensus 19 e~LG~Ga~g~V~rgrnke----tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKE----TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred hhhcCCccceeeeecccc----cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 567778889999987542 36778888876532 111222 2688888888743332 11111111 127
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
+|||..|..|... +.+|+. ...-|. . .++..+ ..+...+..|+
T Consensus 95 vmEyC~gGsL~~~-L~~PEN-----------------~~GLpE--~---e~l~lL--------------~d~~~al~~Lr 137 (732)
T KOG4250|consen 95 VMEYCSGGSLRKV-LNSPEN-----------------AYGLPE--S---EFLDLL--------------SDLVSALRHLR 137 (732)
T ss_pred EEeecCCCcHHHH-hcCccc-----------------ccCCCH--H---HHHHHH--------------HHHHHHHHHHH
Confidence 8999988765421 222211 111111 0 011111 11222233332
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCC--CCceE-EEEEeeccC
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEV--TKSIT-LIDYEYASY 231 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~--~~~v~-lIDwE~a~~ 231 (359)
...+||+|++|+||+.-.. +..++ |+||.+|.-
T Consensus 138 --------En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 138 --------ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred --------HcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 3489999999999998542 23454 999998863
No 392
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.34 E-value=0.01 Score=55.76 Aligned_cols=31 Identities=23% Similarity=0.369 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|+||+++.++..+.++||..+..
T Consensus 134 givH~dikp~Nili~~~~~~~kl~dfg~~~~ 164 (342)
T cd07854 134 NVLHRDLKPANVFINTEDLVLKIGDFGLARI 164 (342)
T ss_pred CcccCCCCHHHEEEcCCCceEEECCccccee
Confidence 6899999999999986545678999988753
No 393
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.33 E-value=0.017 Score=52.16 Aligned_cols=30 Identities=30% Similarity=0.425 Sum_probs=26.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|||++|.||+++++ +.+.|.||..+..
T Consensus 118 ~i~H~~l~~~ni~~~~~-~~~~l~d~g~~~~ 147 (282)
T cd07829 118 RILHRDLKPQNILINRD-GVLKLADFGLARA 147 (282)
T ss_pred CcccCCCChheEEEcCC-CCEEEecCCcccc
Confidence 58999999999999986 7899999987653
No 394
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=96.26 E-value=0.0052 Score=56.43 Aligned_cols=44 Identities=23% Similarity=0.386 Sum_probs=36.2
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeec---------cCCchHHhHHHHHHHH
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYA---------SYNPVAYDIANHFCEM 245 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a---------~~~~~~~Dla~~~~e~ 245 (359)
..-+|||||.+.+|+.+ +...+||||-- ....|.-|+|-++..+
T Consensus 284 l~RvHGDLHLgQVLvt~--g~~~liDFEGEPsRpl~err~~~sPlrDvAgllRS~ 336 (438)
T COG3281 284 LQRVHGDLHLGQVLVTP--GRALLIDFEGEPSRPLDERRAPDSPLRDVAGLLRSF 336 (438)
T ss_pred HHHHhccceehheeeeC--CcEEEEecCCCCCCChhhccCCCCchHHHHHHHHHh
Confidence 45689999999999997 68999999842 3467889999888654
No 395
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=96.24 E-value=0.038 Score=56.39 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=31.4
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHH
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAY 236 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~ 236 (359)
..+.=++|+||+-.|||+..+ +..+|-||.-|+--.+..
T Consensus 162 ~~~pPiIHRDLKiENvLls~~-g~~KLCDFGSatt~~~~~ 200 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSAD-GNYKLCDFGSATTKILSP 200 (738)
T ss_pred cCCCccchhhhhhhheEEcCC-CCEEeCcccccccccCCC
Confidence 345568999999999999986 789999999887544433
No 396
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=96.23 E-value=0.055 Score=50.40 Aligned_cols=26 Identities=19% Similarity=0.393 Sum_probs=22.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEe
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYE 227 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE 227 (359)
.++|+|++|.||+++.+ +.+.+.|+.
T Consensus 121 ~iiH~dlkp~Nil~~~~-~~~~l~~~~ 146 (327)
T cd08227 121 GYVHRSVKASHILISVD-GKVYLSGLR 146 (327)
T ss_pred CEecCCCChhhEEEecC-CcEEEcccc
Confidence 58999999999999986 678888874
No 397
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.22 E-value=0.035 Score=49.06 Aligned_cols=29 Identities=31% Similarity=0.432 Sum_probs=25.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++.+ +.+.++||..+.
T Consensus 105 ~i~H~dlkp~Nil~~~~-~~~~l~df~~~~ 133 (237)
T cd05576 105 GIVCRDLNPNNILLDDR-GHIQLTYFSRWS 133 (237)
T ss_pred CeeccCCCHHHEEEcCC-CCEEEecccchh
Confidence 69999999999999986 789999998653
No 398
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.10 E-value=0.033 Score=52.15 Aligned_cols=30 Identities=20% Similarity=0.408 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 128 ~i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~ 157 (337)
T cd07858 128 NVLHRDLKPSNLLLNAN-CDLKICDFGLART 157 (337)
T ss_pred CEecCCCCHHHEEEcCC-CCEEECcCccccc
Confidence 68999999999999886 7899999997764
No 399
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=96.06 E-value=0.12 Score=46.68 Aligned_cols=30 Identities=27% Similarity=0.407 Sum_probs=26.5
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++++ +.+.++||..+.
T Consensus 136 ~~i~H~di~p~nil~~~~-~~~kl~d~g~~~ 165 (280)
T cd05043 136 RGVIHKDIAARNCVIDEE-LQVKITDNALSR 165 (280)
T ss_pred CCEeecccCHhhEEEcCC-CcEEECCCCCcc
Confidence 368999999999999886 788999999875
No 400
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.06 E-value=0.036 Score=55.33 Aligned_cols=138 Identities=16% Similarity=0.192 Sum_probs=86.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccc-----hHHHHHHHHHHhcCCCCceeEEEeCC----ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFD-----RNDEIRTFEFMSKHGQGPRLLGRFHN----GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-----r~~E~~~l~~l~~~gl~P~~~~~~~~----g~v 111 (359)
+..++.|.-..|++++... .++.|-+|+-.++. .+.+ ...|.+++..+.++-.--.++..+.. ..|
T Consensus 373 l~vLGkGsFGkV~lae~k~----~~e~yAIK~LKK~~-Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKG----TNEYYAIKVLKKGD-ILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred EEEeccCcCceEEEEEEcC----CCcEEEEEEeeccc-eeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 4566779999999998764 36788899987652 1111 24689999888866555556666643 389
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||+.|-.+.. -..... .+ -.+.+-|-. .+--.++.|
T Consensus 448 mey~~Ggdm~~--------------------~~~~~~---F~-e~rarfyaA-----------------ev~l~L~fL-- 484 (694)
T KOG0694|consen 448 MEYVAGGDLMH--------------------HIHTDV---FS-EPRARFYAA-----------------EVVLGLQFL-- 484 (694)
T ss_pred EEecCCCcEEE--------------------EEeccc---cc-HHHHHHHHH-----------------HHHHHHHHH--
Confidence 99999854321 100000 00 001111111 011111222
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
....++++||+.+|||++.+ |-+.|.||..|.-|-
T Consensus 485 ------H~~~IIYRDlKLdNiLLD~e-Gh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 485 ------HENGIIYRDLKLDNLLLDTE-GHVKIADFGLCKEGM 519 (694)
T ss_pred ------HhcCceeeecchhheEEccc-CcEEecccccccccC
Confidence 23489999999999999997 789999999987665
No 401
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.01 E-value=0.04 Score=54.99 Aligned_cols=139 Identities=17% Similarity=0.204 Sum_probs=78.9
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc----ccccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV----EVFFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
+.++.|.++.+=..+... .|+...+|+-.... ......++|+.+++.+....+- .+|....+ ++|.|
T Consensus 18 kTLG~Gstg~vrlakh~~----TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl-~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAE----TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVL-RLYDVWENKQHLYLVLE 92 (786)
T ss_pred ccccCCCCceehhhhccc----ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCee-eeeeeeccCceEEEEEE
Confidence 346778899887776442 37888888865431 1123346899999887754322 22222221 38999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
|++|-.|- + .+ . ..+ +.+. ..-.+|+. +.+.-+
T Consensus 93 yv~gGELF-----d--yl---v----------~kG-~l~e--~eaa~ff~--------------------QIi~gv---- 125 (786)
T KOG0588|consen 93 YVPGGELF-----D--YL---V----------RKG-PLPE--REAAHFFR--------------------QILDGV---- 125 (786)
T ss_pred ecCCchhH-----H--HH---H----------hhC-CCCC--HHHHHHHH--------------------HHHHHH----
Confidence 99874331 0 00 0 000 0011 11111221 111111
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
..-....+||+||+|.|+|++.. +.+.|=||.+|..-.+
T Consensus 126 -~yCH~~~icHRDLKpENlLLd~~-~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 126 -SYCHAFNICHRDLKPENLLLDVK-NNIKIADFGMASLEVP 164 (786)
T ss_pred -HHHhhhcceeccCCchhhhhhcc-cCEeeeccceeecccC
Confidence 11234589999999999999987 5699999999876433
No 402
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=95.99 E-value=0.0039 Score=53.44 Aligned_cols=33 Identities=21% Similarity=0.480 Sum_probs=29.4
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
....++|+|.+|+|||++-+ ++|.+-||.-+|+
T Consensus 166 ~kL~vIHRDvKPsNiLIn~~-GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 166 SKLSVIHRDVKPSNILINYD-GQVKICDFGISGY 198 (282)
T ss_pred HHhhhhhccCCcceEEEccC-CcEEEccccccee
Confidence 34578999999999999997 8999999998886
No 403
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=95.99 E-value=0.053 Score=48.67 Aligned_cols=144 Identities=19% Similarity=0.240 Sum_probs=77.5
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCccc--ccchHHHHHHHHHHhcCCCCceeEEEeCC----ceEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEV--FFDRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEEF 114 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e~ 114 (359)
...|+.|....+|+++........+..+++|+....... ..+...|...++.+ ++.-..++++.... .+|+||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccccc
Confidence 356778888899999876211123578889998653211 11223567777666 33334556665532 389999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHh
Q 018207 115 INARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALY 194 (359)
Q Consensus 115 i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 194 (359)
.++.+|.. .|..- . .. ..+ ......|.. .+...+..|.+
T Consensus 83 ~~~g~L~~--------------~L~~~---~--~~-~~~-~~~~~~i~~-----------------~i~~~l~~Lh~--- 121 (259)
T PF07714_consen 83 CPGGSLDD--------------YLKSK---N--KE-PLS-EQQRLSIAI-----------------QIAEALSYLHS--- 121 (259)
T ss_dssp -TTEBHHH--------------HHHHT---C--TT-TSB-HHHHHHHHH-----------------HHHHHHHHHHH---
T ss_pred cccccccc--------------ccccc---c--cc-ccc-ccccccccc-----------------ccccccccccc---
Confidence 98755431 11111 0 00 011 111111221 12222333322
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
. .++|||+++.||+++++ +.+.|-||.++...
T Consensus 122 -~----~iiH~~l~~~nill~~~-~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 122 -N----NIIHGNLSPSNILLDSN-GQVKLSDFGLSRPI 153 (259)
T ss_dssp -T----TEEEST-SGGGEEEETT-TEEEEESTTTGEET
T ss_pred -c----ccccccccccccccccc-cccccccccccccc
Confidence 1 38999999999999986 78899999776643
No 404
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=95.95 E-value=0.12 Score=53.22 Aligned_cols=139 Identities=15% Similarity=0.257 Sum_probs=84.3
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEe----CC-----ceE
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRF----HN-----GRV 111 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~----~~-----g~v 111 (359)
++.+..|....+|++...+ .+....+||-....+.-...+.|..+++.++.+.-.++.|+.+ ++ |+|
T Consensus 24 ~evig~Gtygkv~k~k~~~----~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVK----TGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred EEEEeeccceeEEEEeeee----cCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence 3445667777899997543 3566777876544332222357888999988888888888764 21 489
Q ss_pred EEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHH
Q 018207 112 EEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEK 191 (359)
Q Consensus 112 ~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 191 (359)
|||..|-+.+ .+.+.+. +.+ +. ..|+..+ +.+.+.-+..
T Consensus 100 MEfC~gGSVT-----------DLVKn~~--------g~r---l~---E~~IaYI----------------~re~lrgl~H 138 (953)
T KOG0587|consen 100 MEFCGGGSVT-----------DLVKNTK--------GNR---LK---EEWIAYI----------------LREILRGLAH 138 (953)
T ss_pred eeccCCccHH-----------HHHhhhc--------ccc---hh---hHHHHHH----------------HHHHHHHHHH
Confidence 9999886543 1111111 000 00 1112111 1111111111
Q ss_pred HHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 192 ALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 192 ~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
-...-++|+|.+-.|||++.+ ++|.++||.-+.
T Consensus 139 -----LH~nkviHRDikG~NiLLT~e-~~VKLvDFGvSa 171 (953)
T KOG0587|consen 139 -----LHNNKVIHRDIKGQNVLLTEN-AEVKLVDFGVSA 171 (953)
T ss_pred -----HhhcceeeecccCceEEEecc-CcEEEeeeeeee
Confidence 234478999999999999997 899999998654
No 405
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.89 E-value=0.089 Score=49.12 Aligned_cols=63 Identities=11% Similarity=0.014 Sum_probs=40.7
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccc-cchHHHHHHHHHHhc---CCCCceeEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVF-FDRNDEIRTFEFMSK---HGQGPRLLGRF 106 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~l~~l~~---~gl~P~~~~~~ 106 (359)
...|+.|..+.+|.+..... ....+++|+........ .....|..++..+.. ..-.|.++...
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~---~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G 89 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSE---KNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHG 89 (322)
T ss_pred eeeccccCCceEEEEEecCC---CCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEec
Confidence 45678899999999985421 13478888876432111 123479999998885 22367777665
No 406
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.74 E-value=0.038 Score=50.98 Aligned_cols=97 Identities=24% Similarity=0.376 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhcCCC-CceeEEEeCCceEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHH
Q 018207 84 NDEIRTFEFMSKHGQ-GPRLLGRFHNGRVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWL 162 (359)
Q Consensus 84 ~~E~~~l~~l~~~gl-~P~~~~~~~~g~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~ 162 (359)
++|...|..+.++|+ +|.++....+-+||.||....+....+.+ +... + ..+..
T Consensus 333 EkEmhNL~RMq~~GlpcP~vV~lkkhvLVMsFiGd~~~aAPkLK~----------------v~l~-----d--~E~~~-- 387 (531)
T KOG2269|consen 333 EKEMHNLSRMQKHGLPCPQVVKLKKHVLVMSFIGDQGLAAPKLKN----------------VELT-----D--DERRN-- 387 (531)
T ss_pred HHHHHHHHHHHhcCCCCCceeeeecceEEEEeecCCCCCCccccc----------------cccC-----h--HHHHH--
Confidence 567888888899999 68888888899999999765443222221 0000 0 00100
Q ss_pred HHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 163 IATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
..+++...+.+|.. ...++|.|+.--|+|+.+ ++|++||---+
T Consensus 388 ---------------aY~q~~~~M~~lY~-------Ec~LVHADlSEyN~Lw~~--gKvw~IDVsQs 430 (531)
T KOG2269|consen 388 ---------------AYDQVQSIMCRLYK-------ECLLVHADLSEYNLLWTP--GKVWVIDVSQS 430 (531)
T ss_pred ---------------HHHHHHHHHHHHHH-------hhheeecchhhhhheecC--CceEEEechhc
Confidence 01122223333332 347899999999999998 58999996543
No 407
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=95.48 E-value=0.01 Score=53.08 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=30.0
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.+....++|+|.+|+|||+++. +.+.|-||.-+|.
T Consensus 207 LKeKH~viHRDvKPSNILlDe~-GniKlCDFGIsGr 241 (391)
T KOG0983|consen 207 LKEKHGVIHRDVKPSNILLDER-GNIKLCDFGISGR 241 (391)
T ss_pred HHHhcceeecccCccceEEccC-CCEEeecccccce
Confidence 3556699999999999999996 8899999987663
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=95.46 E-value=0.018 Score=56.97 Aligned_cols=37 Identities=27% Similarity=0.406 Sum_probs=30.3
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchH
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVA 235 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~ 235 (359)
..+++|+||+|+|||++++.+.+.|+||.++..-.+.
T Consensus 433 ~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 433 EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 3699999999999999533367999999998866554
No 409
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=95.43 E-value=0.027 Score=55.52 Aligned_cols=141 Identities=13% Similarity=0.211 Sum_probs=79.4
Q ss_pred CCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---ccccchHHHHHHHHHHhcCCCCceeEEEe--CC-ce
Q 018207 37 NSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFFDRNDEIRTFEFMSKHGQGPRLLGRF--HN-GR 110 (359)
Q Consensus 37 ~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~~-g~ 110 (359)
+..--.+|+.|.-.+||+-.+ .+.+-||+.+-.. +.+...+.|..+++.=....+. -..++. ++ .+
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~w-------hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIl-LFMG~~~~p~~AI 464 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRW-------HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENIL-LFMGACMNPPLAI 464 (678)
T ss_pred Hhhccceeccccccceeeccc-------ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhhe-eeehhhcCCceee
Confidence 334457788899999999976 3678888886432 2222234677777654332221 011111 11 37
Q ss_pred EEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHH
Q 018207 111 VEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLE 190 (359)
Q Consensus 111 v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 190 (359)
|+.|.+|.+|-. -+|..... .+ |..-++.++ ++.+-+..
T Consensus 465 iTqwCeGsSLY~-----------------hlHv~etk----fd----m~~~idIAq--------------QiaqGM~Y-- 503 (678)
T KOG0193|consen 465 ITQWCEGSSLYT-----------------HLHVQETK----FD----MNTTIDIAQ--------------QIAQGMDY-- 503 (678)
T ss_pred eehhccCchhhh-----------------hccchhhh----hh----HHHHHHHHH--------------HHHHhhhh--
Confidence 888888877642 12322110 11 111111110 11111222
Q ss_pred HHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 191 KALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 191 ~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
| ...-++|.||+.+||+++++ +.|+|=||..++.--
T Consensus 504 --L----HAK~IIHrDLKSnNIFl~~~-~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 504 --L----HAKNIIHRDLKSNNIFLHED-LKVKIGDFGLATVKT 539 (678)
T ss_pred --h----hhhhhhhhhccccceEEccC-CcEEEecccceeeee
Confidence 2 23478999999999999986 789999999887643
No 410
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=95.42 E-value=0.039 Score=49.27 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=25.4
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+|+.|.||++++ +.+.++||..+..
T Consensus 125 ~~i~h~~l~~~nili~~--~~~~l~d~g~~~~ 154 (260)
T cd08222 125 RRILHRDLKAKNIFLKN--NLLKIGDFGVSRL 154 (260)
T ss_pred cCccccCCChhheEeec--CCEeecccCceee
Confidence 37899999999999986 4689999987653
No 411
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=95.40 E-value=0.21 Score=46.51 Aligned_cols=26 Identities=19% Similarity=0.441 Sum_probs=22.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEe
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYE 227 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE 227 (359)
.++|+|++|.||+++.+ +.+.+.||.
T Consensus 121 ~ivHrDlkp~Nill~~~-~~~~~~~~~ 146 (328)
T cd08226 121 GYIHRNIKASHILISGD-GLVSLSGLS 146 (328)
T ss_pred CeecCCCCHHHEEEeCC-CcEEEechH
Confidence 68999999999999986 678888874
No 412
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=95.31 E-value=0.1 Score=47.18 Aligned_cols=29 Identities=21% Similarity=0.289 Sum_probs=22.1
Q ss_pred eEEeccCCCCCeeEeCCC------CceEEEEEeec
Q 018207 201 GFCHNDLQYGNIMIDEVT------KSITLIDYEYA 229 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~------~~v~lIDwE~a 229 (359)
.++|+|++|.||++++.+ ..+.+.||..+
T Consensus 137 ~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~ 171 (274)
T cd05076 137 NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVS 171 (274)
T ss_pred CccCCCCCcccEEEeccCcccCccceeeecCCccc
Confidence 689999999999997531 13568888754
No 413
>PHA02882 putative serine/threonine kinase; Provisional
Probab=95.30 E-value=0.013 Score=53.75 Aligned_cols=29 Identities=41% Similarity=0.606 Sum_probs=26.1
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.|||++++ +.+.|+||..|.
T Consensus 146 ~iiHrDiKp~Nill~~~-~~~~l~DFGla~ 174 (294)
T PHA02882 146 GISHGDIKPENIMVDGN-NRGYIIDYGIAS 174 (294)
T ss_pred CeecCCCCHHHEEEcCC-CcEEEEEcCCce
Confidence 68999999999999876 788999999875
No 414
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=95.28 E-value=0.06 Score=52.04 Aligned_cols=138 Identities=21% Similarity=0.256 Sum_probs=77.1
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeec
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFIN 116 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~ 116 (359)
++.|+.|.-..|+...... ..++-+|.-..++-..-+..+|++++..|....++- +++... + .+|+||++
T Consensus 211 ~~~LG~G~FG~V~~g~~~~-----~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~-l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNG-----STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVK-LYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHhcCCccceEEEEEEcC-----CCcccceEEeccccChhHHHHHHHHHHhCcccCeEE-EEEEEecCCceEEEEEecc
Confidence 3456778888888887653 224444443333211112237999999988765543 444443 3 38999997
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcC
Q 018207 117 ARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRN 196 (359)
Q Consensus 117 G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 196 (359)
--.|- ..|+. |.-.. .. ...+..|.. ++.+-++.|++
T Consensus 285 ~GsLl--------------~yLr~-~~~~~-----l~-~~~Ll~~a~-----------------qIaeGM~YLes----- 321 (468)
T KOG0197|consen 285 KGSLL--------------DYLRT-REGGL-----LN-LPQLLDFAA-----------------QIAEGMAYLES----- 321 (468)
T ss_pred cCcHH--------------HHhhh-cCCCc-----cc-hHHHHHHHH-----------------HHHHHHHHHHh-----
Confidence 43321 11221 11000 00 011111111 12222333332
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..++|+||-..|||++++ ..+.|=||..|..
T Consensus 322 ---~~~IHRDLAARNiLV~~~-~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 322 ---KNYIHRDLAARNILVDED-LVVKISDFGLARL 352 (468)
T ss_pred ---CCccchhhhhhheeeccC-ceEEEcccccccc
Confidence 378999999999999986 6788999999884
No 415
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=95.15 E-value=0.055 Score=45.43 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=27.2
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...-+.|+|++|.|++++.+ +.+.+-||..|.
T Consensus 118 hshnvlhrdlkpqnllin~n-gelkladfglar 149 (292)
T KOG0662|consen 118 HSHNVLHRDLKPQNLLINRN-GELKLADFGLAR 149 (292)
T ss_pred hhhhhhhccCCcceEEeccC-CcEEecccchhh
Confidence 33456789999999999986 899999999875
No 416
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=95.14 E-value=0.19 Score=49.06 Aligned_cols=33 Identities=30% Similarity=0.572 Sum_probs=27.8
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|.|++|+|||+++....+.|-||..|+.
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCccccc
Confidence 358999999999999999756667999987764
No 417
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.88 E-value=0.31 Score=46.66 Aligned_cols=79 Identities=9% Similarity=0.107 Sum_probs=44.8
Q ss_pred CCCCeEE-EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC--cccccchHHHHHHHHHHhcCCCCceeEEEe--C--
Q 018207 35 DRNSLQV-IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG--VEVFFDRNDEIRTFEFMSKHGQGPRLLGRF--H-- 107 (359)
Q Consensus 35 ~~~~~~i-~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~--~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~-- 107 (359)
+.+..++ ..|+-|.+-.+|+..+.+. +..+-+|+..-. ...+-...+|.+++..+..-.+.+ .+..+ +
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~----~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~-~~~sFvv~~~ 98 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPT----NEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVT-YHCSFVVDSE 98 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeeccc----CCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcce-EEEEEEecce
Confidence 4455554 4567799999999988742 466778876532 111222346777776554433322 22222 2
Q ss_pred CceEEEeecCC
Q 018207 108 NGRVEEFINAR 118 (359)
Q Consensus 108 ~g~v~e~i~G~ 118 (359)
=|.||.|..|-
T Consensus 99 LWvVmpfMa~G 109 (516)
T KOG0582|consen 99 LWVVMPFMAGG 109 (516)
T ss_pred eEEeehhhcCC
Confidence 25788888764
No 418
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=94.86 E-value=0.028 Score=52.87 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=30.4
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
-...+++|+|++|+|++++...++-.||||..|..
T Consensus 148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred hhccCccccCCCccccccccccCCceEEechhHHH
Confidence 44569999999999999998878888999998873
No 419
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.82 E-value=0.41 Score=47.35 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=78.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc---cccc-chHHHHHHHHHHhcCCCCceeEEEeCC----ceEEE
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV---EVFF-DRNDEIRTFEFMSKHGQGPRLLGRFHN----GRVEE 113 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~---~~~~-dr~~E~~~l~~l~~~gl~P~~~~~~~~----g~v~e 113 (359)
..|+.|..-.+|.++..+ .+..|-+|+-.... .... ...+|+++.+.|+...++ +++..+++ .+|.|
T Consensus 24 ~~LGkGgFA~cYe~~~~~----tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV-~f~~~FEDs~nVYivLE 98 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLD----TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIV-QFYHFFEDSNNVYIVLE 98 (592)
T ss_pred eeeccCcceEEEEEEEcC----CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEE-eeeeEeecCCceEEEEE
Confidence 456778889999998642 36788888865421 1111 124688888877754332 35555543 26666
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHH
Q 018207 114 FINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKAL 193 (359)
Q Consensus 114 ~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 193 (359)
..+-+. |..||....+.. +| ..+.++.++- .-+..|
T Consensus 99 LC~~~s------------------L~el~Krrk~lt-Ep----Eary~l~QIv-----------------~GlkYL---- 134 (592)
T KOG0575|consen 99 LCHRGS------------------LMELLKRRKPLT-EP----EARYFLRQIV-----------------EGLKYL---- 134 (592)
T ss_pred ecCCcc------------------HHHHHHhcCCCC-cH----HHHHHHHHHH-----------------HHHHHH----
Confidence 664332 223333211111 11 2233333221 111122
Q ss_pred hcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 194 YRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 194 ~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
....++|+||+.||++++++ -.|.|=||..|+.
T Consensus 135 ----H~~~IiHRDLKLGNlfL~~~-~~VKIgDFGLAt~ 167 (592)
T KOG0575|consen 135 ----HSLGIIHRDLKLGNLFLNEN-MNVKIGDFGLATQ 167 (592)
T ss_pred ----HhcCceecccchhheeecCc-CcEEecccceeee
Confidence 22369999999999999986 6899999998875
No 420
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=94.80 E-value=0.17 Score=54.53 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=44.1
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCCCceeEEEeC--C--ceEEEeecC
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQGPRLLGRFH--N--GRVEEFINA 117 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~--~--g~v~e~i~G 117 (359)
..++.|....+|+..... .+..+++|....... ....|.+.++.+.... ..++++... + .+||||++|
T Consensus 696 ~~ig~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~---~~~~~~~~l~~l~Hpn-Iv~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 696 NVISRGKKGASYKGKSIK----NGMQFVVKEINDVNS---IPSSEIADMGKLQHPN-IVKLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred cEEccCCCeeEEEEEECC----CCcEEEEEEccCCcc---ccHHHHHHHhhCCCCC-cceEEEEEEcCCCCEEEEeCCCC
Confidence 457778889999997542 367888887643221 1124566666553323 455666543 2 389999998
Q ss_pred CCC
Q 018207 118 RTL 120 (359)
Q Consensus 118 ~~l 120 (359)
..+
T Consensus 768 g~L 770 (968)
T PLN00113 768 KNL 770 (968)
T ss_pred CcH
Confidence 655
No 421
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=94.70 E-value=0.022 Score=57.58 Aligned_cols=31 Identities=32% Similarity=0.485 Sum_probs=27.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.|||++++.+.+.|+||..|.
T Consensus 274 ~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~ 304 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAA 304 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCCcEEEEeCCCcc
Confidence 3799999999999998654679999999885
No 422
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=94.69 E-value=0.023 Score=53.34 Aligned_cols=30 Identities=27% Similarity=0.530 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 138 ~ivHrdikp~Nil~~~~-~~~kl~Dfg~~~~ 167 (343)
T cd07878 138 GIIHRDLKPSNVAVNED-CELRILDFGLARQ 167 (343)
T ss_pred CeecccCChhhEEECCC-CCEEEcCCcccee
Confidence 68999999999999986 7899999987653
No 423
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=94.60 E-value=0.018 Score=51.50 Aligned_cols=41 Identities=22% Similarity=0.358 Sum_probs=35.3
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHH
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANH 241 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~ 241 (359)
.-++|+||+|.|||.+++ .++.+-||.+|+.-.|+--|-.+
T Consensus 142 ~~IVHRDLKpENILlddn-~~i~isDFGFa~~l~~GekLrel 182 (411)
T KOG0599|consen 142 RNIVHRDLKPENILLDDN-MNIKISDFGFACQLEPGEKLREL 182 (411)
T ss_pred hhhhhcccChhheeeccc-cceEEeccceeeccCCchhHHHh
Confidence 368999999999999986 78999999999988887766554
No 424
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=94.32 E-value=0.031 Score=49.89 Aligned_cols=32 Identities=22% Similarity=0.450 Sum_probs=28.2
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
..-++|+|.+|+|||++.. |.|.|-||.-||.
T Consensus 186 ~lkiIHRDvKPSNILldr~-G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 186 ELKIIHRDVKPSNILLDRH-GDVKLCDFGICGQ 217 (361)
T ss_pred HhhhhhccCChhheEEecC-CCEeeecccchHh
Confidence 3478999999999999986 8899999998875
No 425
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=94.31 E-value=0.027 Score=50.62 Aligned_cols=30 Identities=27% Similarity=0.473 Sum_probs=26.3
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.++||..+..
T Consensus 132 ~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~ 161 (272)
T cd05075 132 SFIHRDLAARNCMLNEN-MNVCVADFGLSKK 161 (272)
T ss_pred CeeccccchhheEEcCC-CCEEECCCCcccc
Confidence 68999999999999886 7899999987664
No 426
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=94.30 E-value=0.02 Score=52.89 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=31.1
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
.-.++|+||+|+|++++.+ ..+.+-||.+|+..+.
T Consensus 143 SAnViHRDLKPsNll~n~~-c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 143 SANVIHRDLKPSNLLLNAD-CDLKICDFGLARYLDK 177 (359)
T ss_pred cccccccccchhheeeccC-CCEEeccccceeeccc
Confidence 3489999999999999987 7899999999998764
No 427
>PHA03210 serine/threonine kinase US3; Provisional
Probab=94.18 E-value=0.028 Score=55.92 Aligned_cols=29 Identities=28% Similarity=0.385 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 287 gIiHrDLKP~NILl~~~-~~vkL~DFGla~ 315 (501)
T PHA03210 287 KLIHRDIKLENIFLNCD-GKIVLGDFGTAM 315 (501)
T ss_pred CeecCCCCHHHEEECCC-CCEEEEeCCCce
Confidence 68999999999999986 789999998774
No 428
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.77 E-value=0.23 Score=47.46 Aligned_cols=39 Identities=18% Similarity=0.257 Sum_probs=32.1
Q ss_pred cCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 195 RNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 195 ~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
..+..+.+.|+|+++.|||+..+ +...|=|...|-.-+-
T Consensus 330 GTqgKPaIAHRDlKSKNILVKkn-~~C~IADLGLAv~h~~ 368 (513)
T KOG2052|consen 330 GTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDS 368 (513)
T ss_pred cCCCCchhhccccccccEEEccC-CcEEEeeceeeEEecc
Confidence 45677899999999999999886 7888999988765443
No 429
>PRK10345 hypothetical protein; Provisional
Probab=93.72 E-value=0.21 Score=43.57 Aligned_cols=59 Identities=10% Similarity=0.141 Sum_probs=35.2
Q ss_pred EEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc-cccchHHHHHHHHHHhcCCC----CceeEEEe
Q 018207 41 VIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE-VFFDRNDEIRTFEFMSKHGQ----GPRLLGRF 106 (359)
Q Consensus 41 i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~-~~~dr~~E~~~l~~l~~~gl----~P~~~~~~ 106 (359)
.+.|+.|..-.+|. .+. .+.+ ++|+...... ..-+..+|+..++.+...+. .+++++..
T Consensus 7 ~~~LG~G~~~~Vy~--hp~----~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~ 70 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPE----DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTV 70 (210)
T ss_pred cceecCCCceEEEE--CCC----CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEE
Confidence 46788898899995 332 2344 5776543311 11123579999999865332 46677655
No 430
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=93.64 E-value=0.076 Score=48.91 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=30.6
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeecc-CCch
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS-YNPV 234 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~-~~~~ 234 (359)
..-++|+||+++|+|++.. |.+.+-||..|+ ||.|
T Consensus 195 ~~wilHRDLK~SNLLm~~~-G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 195 DNWILHRDLKTSNLLLSHK-GILKIADFGLAREYGSP 230 (419)
T ss_pred hceeEecccchhheeeccC-CcEEecccchhhhhcCC
Confidence 4578999999999999986 889999999987 6666
No 431
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=93.52 E-value=0.059 Score=57.27 Aligned_cols=33 Identities=30% Similarity=0.489 Sum_probs=29.3
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
+..+++|+||+|.||+++++ +.|.|.||..|..
T Consensus 714 H~~giIHRDLKP~NIFLd~~-~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSR-NSVKIGDFGLATD 746 (1351)
T ss_pred HhCceeeccCCcceeEEcCC-CCeeecccccchh
Confidence 44579999999999999986 7899999998876
No 432
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=93.40 E-value=0.061 Score=47.53 Aligned_cols=33 Identities=24% Similarity=0.482 Sum_probs=28.6
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
-+.|+|++|+||++.++ +.++++||.-+...+-
T Consensus 149 ~yAH~DiKP~NILls~~-~~~vl~D~GS~~~a~i 181 (302)
T KOG2345|consen 149 PYAHRDIKPANILLSDS-GLPVLMDLGSATQAPI 181 (302)
T ss_pred cccccCCCcceeEecCC-CceEEEeccCccccce
Confidence 68999999999999985 7899999998776543
No 433
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.20 E-value=0.055 Score=57.04 Aligned_cols=32 Identities=25% Similarity=0.508 Sum_probs=25.3
Q ss_pred ceeEEeccCCCCCeeEeC------CCCceEEEEEeecc
Q 018207 199 HIGFCHNDLQYGNIMIDE------VTKSITLIDYEYAS 230 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~------~~~~v~lIDwE~a~ 230 (359)
...+||||++|+|+|+.. +...++||||.++-
T Consensus 812 ~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 812 AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred hcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 348999999999999953 23568899998653
No 434
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=93.12 E-value=0.056 Score=48.21 Aligned_cols=140 Identities=14% Similarity=0.221 Sum_probs=79.5
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC-cccccch--HHHHHHHHHHhcCCCCceeEEEeCC--c--eEE
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG-VEVFFDR--NDEIRTFEFMSKHGQGPRLLGRFHN--G--RVE 112 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~-~~~~~dr--~~E~~~l~~l~~~gl~P~~~~~~~~--g--~v~ 112 (359)
..+.++.|.-..+|+..... .++.+-+|--..+ ....+++ -+|++.|+.+....+ -.++..++. + +|+
T Consensus 6 ~~~~lGEG~~gvVyka~d~~----t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nI-i~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTE----TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNI-IELIDVFPHKSNLSLVF 80 (318)
T ss_pred hhhhhcCcceEEEEEEEecC----CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcch-hhhhhhccCCCceEEEE
Confidence 45678889999999987542 3566666543322 2222333 479999988874322 223333332 2 789
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||++.. + +.+. . ....+-....+..|+.... +-+..+.
T Consensus 81 Efm~td------L------e~vI------k-----d~~i~l~pa~iK~y~~m~L-----------------kGl~y~H-- 118 (318)
T KOG0659|consen 81 EFMPTD------L------EVVI------K-----DKNIILSPADIKSYMLMTL-----------------KGLAYCH-- 118 (318)
T ss_pred Eecccc------H------HHHh------c-----ccccccCHHHHHHHHHHHH-----------------HHHHHHH--
Confidence 998652 1 0000 0 0001111234555553321 1112221
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
..-+.|+|++|.|+|++.+ +.+.+=||..|+...
T Consensus 119 ------~~~IlHRDlKPnNLLis~~-g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 119 ------SKWILHRDLKPNNLLISSD-GQLKIADFGLARFFG 152 (318)
T ss_pred ------hhhhhcccCCccceEEcCC-CcEEeecccchhccC
Confidence 2357999999999999987 889999999887543
No 435
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=93.10 E-value=0.51 Score=45.44 Aligned_cols=147 Identities=17% Similarity=0.228 Sum_probs=83.0
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHH--HHHHHHHhcCCCCceeEEEeC----Cc----
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDE--IRTFEFMSKHGQGPRLLGRFH----NG---- 109 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E--~~~l~~l~~~gl~P~~~~~~~----~g---- 109 (359)
.++.++.|.....+.+.... ++..||+|.-.-. ...+++++ .+-...+++ -.-|-++.+-+ ++
T Consensus 8 ~~~~iG~GafG~a~lvrhk~----~~~~~vlK~I~l~--~~t~~~r~~A~~E~~lis~-~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 8 VLRQVGRGAFGSALLVRHKS----DDKLYVLKKINLE--KLTEPERRSAIQEMDLLSK-LLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred hhhhcCccccchhhhhhhcc----CCceEEEEEEecc--ccCchhhHHHHHHHHHHHh-ccCCCeeeeccchhcCCceEE
Confidence 34567778888888887542 4678888765422 11222221 122223333 23566665432 22
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
++|+|.+|-.+. +.+.+-..... | .+++..|+-++. -.+..+
T Consensus 81 Ivm~Y~eGg~l~--------------~~i~~~k~~~f-----~--E~~i~~~~~Q~~-----------------~av~yl 122 (426)
T KOG0589|consen 81 IVMEYCEGGDLA--------------QLIKEQKGVLF-----P--EERILKWFVQIL-----------------LAVNYL 122 (426)
T ss_pred EEEeecCCCCHH--------------HHHHHHhhccc-----c--HHHHHHHHHHHH-----------------HHHHHH
Confidence 789999996543 11111111111 1 234555554321 112222
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHH
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIAN 240 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~ 240 (359)
. ...+.|+|+++.||+.+.+ +.|.+=||+.|..--+-.++|.
T Consensus 123 H--------~~~iLHRDlK~~Nifltk~-~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 123 H--------ENRVLHRDLKCANIFLTKD-KKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred H--------hhhhhcccchhhhhhcccc-CceeecchhhhhhcCCchhhhh
Confidence 1 3378999999999999997 7789999998886655555554
No 436
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=92.96 E-value=0.081 Score=52.55 Aligned_cols=30 Identities=27% Similarity=0.534 Sum_probs=26.4
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 328 ~~ivHrDLKp~NILl~~~-~~~kL~DFGla~ 357 (507)
T PLN03224 328 IGIVHRDIKPENLLVTVD-GQVKIIDFGAAV 357 (507)
T ss_pred CCeecCCCchHhEEECCC-CcEEEEeCcCcc
Confidence 368999999999999986 789999999874
No 437
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=92.91 E-value=0.087 Score=47.31 Aligned_cols=30 Identities=27% Similarity=0.480 Sum_probs=26.2
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ ..+.++||..+..
T Consensus 133 ~i~H~dikp~nili~~~-~~~kl~dfg~~~~ 162 (273)
T cd05074 133 NFIHRDLAARNCMLNEN-MTVCVADFGLSKK 162 (273)
T ss_pred CEeecccchhhEEEcCC-CCEEECccccccc
Confidence 68999999999999876 7889999987663
No 438
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=92.21 E-value=0.18 Score=48.30 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=51.2
Q ss_pred CCCceeEEeccCCCCCeeEeCC-CCceE--EEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCC---HHHHH
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEV-TKSIT--LIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPD---LEERH 269 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~-~~~v~--lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~---~~~~~ 269 (359)
...+.|+++||+|.+|+=.-.+ .+.++ +=|||.+..|++.|||-.+......--. . ..++. .+..+
T Consensus 39 ~~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si~laa~-----~---~gl~~~~~~~~~~ 110 (385)
T PF10009_consen 39 PSGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSIVLAAR-----E---NGLSDKDARKAVR 110 (385)
T ss_pred CCCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHHHHHHH-----H---cCCCHHHHHHHHH
Confidence 4678899999999999865322 24444 6789999999999999887655432110 0 12221 23467
Q ss_pred HHHHHHhhc
Q 018207 270 RFLHAYLSS 278 (359)
Q Consensus 270 ~fl~~Y~~~ 278 (359)
.|+++|...
T Consensus 111 ~~~~~Y~~~ 119 (385)
T PF10009_consen 111 AFLEGYREA 119 (385)
T ss_pred HHHHHHHHH
Confidence 888999863
No 439
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=92.17 E-value=0.094 Score=49.25 Aligned_cols=30 Identities=30% Similarity=0.537 Sum_probs=26.6
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.++|+|++|.||+++++ +.+.|+||..+..
T Consensus 138 gi~H~dlkp~Nill~~~-~~~kL~dfg~~~~ 167 (343)
T cd07851 138 GIIHRDLKPSNIAVNED-CELKILDFGLARH 167 (343)
T ss_pred CeecCCCCHHHeEECCC-CCEEEcccccccc
Confidence 68999999999999986 7899999987753
No 440
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=92.13 E-value=0.078 Score=48.48 Aligned_cols=37 Identities=22% Similarity=0.442 Sum_probs=31.7
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchH
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVA 235 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~ 235 (359)
...+++|+||+|.||+++.+ ..+.+.||.+|.-.++.
T Consensus 135 hs~~IihRdLkPsnivv~~~-~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 135 HSAGIIHRDLKPSNIVVNSD-CTLKILDFGLARTEDTD 171 (369)
T ss_pred HhcceeecccCcccceecch-hheeeccchhhcccCcc
Confidence 34589999999999999986 77889999999877665
No 441
>PLN00181 protein SPA1-RELATED; Provisional
Probab=91.97 E-value=0.18 Score=53.17 Aligned_cols=32 Identities=9% Similarity=0.227 Sum_probs=25.9
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
...++|+|++|.|||++.. +.+.++||..+..
T Consensus 98 ~~gIvHrDlKP~NiLl~~~-~~~k~~d~~~~~~ 129 (793)
T PLN00181 98 SQGIVVHNVRPSCFVMSSF-NHVSFIESASCSD 129 (793)
T ss_pred hCCeeeccCCchhEEEccc-CcEEEeeccccCc
Confidence 3579999999999999875 6788888866643
No 442
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.72 E-value=0.44 Score=43.44 Aligned_cols=76 Identities=9% Similarity=0.150 Sum_probs=52.3
Q ss_pred CCCceeEEeccCCCCCeeE--eCCCCceE--EEEEeeccCCchHHhHHHHHHHHhhccCCCCCCCCCCCCCCCHHHHHHH
Q 018207 196 NDQHIGFCHNDLQYGNIMI--DEVTKSIT--LIDYEYASYNPVAYDIANHFCEMAADYHTETPHLMDYSKYPDLEERHRF 271 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~--~~~~~~v~--lIDwE~a~~~~~~~Dla~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~f 271 (359)
.+.|.+++-||+|.+|+=- +.+ +.|+ +=|||.+-.|++.+||-.+......--.++ .+. .-......+.|
T Consensus 54 p~~p~tw~cGD~HLgN~ga~~~~~-G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a~Rs~---~L~--d~d~~~~~~~~ 127 (410)
T COG4320 54 PKTPFTWLCGDAHLGNFGAARNSK-GNVVFKIADFDEGHLGQYIWDLVRLAVSLVLAGRSN---GLN--DADIEKAIKIM 127 (410)
T ss_pred CCCCceEEecccccccchhhccCC-CceEEEecccchhhccchHHHHHHHHHHHHHHhhcc---CCC--chhHHHHHHHH
Confidence 4678899999999999843 333 4454 789999999999999998876654321111 111 11113467889
Q ss_pred HHHHhh
Q 018207 272 LHAYLS 277 (359)
Q Consensus 272 l~~Y~~ 277 (359)
+++|..
T Consensus 128 v~~Y~~ 133 (410)
T COG4320 128 VQAYKM 133 (410)
T ss_pred HHHHHH
Confidence 999954
No 443
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.40 E-value=0.11 Score=46.47 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=28.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
-.+.|+|++|||+|++.+ -.+.|-||..|+.-++
T Consensus 175 A~ILHRDIKPGNLLVNSN-CvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 175 ANILHRDIKPGNLLVNSN-CILKICDFGLARTWDQ 208 (449)
T ss_pred cchhhccCCCccEEeccC-ceEEecccccccccch
Confidence 378999999999999975 5667999998876443
No 444
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=91.30 E-value=0.089 Score=47.79 Aligned_cols=40 Identities=20% Similarity=0.399 Sum_probs=30.7
Q ss_pred eeEEeccCCCCCeeEeCC--CCceEEEEEeeccCCchHHhHH
Q 018207 200 IGFCHNDLQYGNIMIDEV--TKSITLIDYEYASYNPVAYDIA 239 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~--~~~v~lIDwE~a~~~~~~~Dla 239 (359)
.-+.|+|++|.|+|+... +-.+.|-||.+|.....-.||-
T Consensus 180 ~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 180 MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred cchhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 367899999999999763 2346699999998877555543
No 445
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=91.29 E-value=2.2 Score=39.67 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=25.6
Q ss_pred ceeEEeccCCCCCeeEeC----CCCceEEEEEeecc
Q 018207 199 HIGFCHNDLQYGNIMIDE----VTKSITLIDYEYAS 230 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~----~~~~v~lIDwE~a~ 230 (359)
..-++=+|++|.|+|+.. +.+.+++|||..|.
T Consensus 142 ~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 142 EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 447899999999999953 22567899999876
No 446
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=91.28 E-value=1.7 Score=42.78 Aligned_cols=139 Identities=16% Similarity=0.190 Sum_probs=76.3
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC---cccccchHHHHHHHHHHhcCCCCc-eeEEEeCC--ceEEEee
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG---VEVFFDRNDEIRTFEFMSKHGQGP-RLLGRFHN--GRVEEFI 115 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~---~~~~~dr~~E~~~l~~l~~~gl~P-~~~~~~~~--g~v~e~i 115 (359)
+.++.|.-..+|--.... .|+.+-+|+-.+- +...-...+|.++|+.+..-|++- .+-...++ +.|||-+
T Consensus 570 evLGSGQFG~VYgg~hRk----tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl 645 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRK----TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL 645 (888)
T ss_pred hhccCCcceeeecceecc----cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh
Confidence 346667778888665442 3677777664321 111111247999999888877643 22222222 4788888
Q ss_pred cCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhc
Q 018207 116 NARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYR 195 (359)
Q Consensus 116 ~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 195 (359)
.|..|.- | | +.. ..+-| +++.+++ ..++...++.|
T Consensus 646 ~GDMLEM-----------I---L----SsE--kgRL~---er~TkFl----------------vtQIL~ALr~L------ 680 (888)
T KOG4236|consen 646 HGDMLEM-----------I---L----SSE--KGRLP---ERITKFL----------------VTQILVALRYL------ 680 (888)
T ss_pred cchHHHH-----------H---H----Hhh--cccch---HHHHHHH----------------HHHHHHHHHHh------
Confidence 8865421 0 0 000 00111 2222222 11121122222
Q ss_pred CCCceeEEeccCCCCCeeEeCCC--CceEEEEEeeccC
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVT--KSITLIDYEYASY 231 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~--~~v~lIDwE~a~~ 231 (359)
....++|+||+|.|||+.... .++.|-||.||++
T Consensus 681 --H~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 681 --HFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred --hhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence 234789999999999997642 4688999999875
No 447
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=91.17 E-value=2.8 Score=35.87 Aligned_cols=106 Identities=18% Similarity=0.192 Sum_probs=65.0
Q ss_pred HHHHHHHHHhcCCCCceeEEEeCCceEEEeecCC-CCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHH
Q 018207 85 DEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINAR-TLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLI 163 (359)
Q Consensus 85 ~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~-~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~ 163 (359)
.|..+++.+......|++++......+.|+++.. ..+. +. +...... ..|..
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~~~v~E~~~~~~~~~~-------------------~~-~l~~~~~-------~~w~~ 60 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGRFYVVEYVGAGSLYGI-------------------YR-PLSQFLQ-------SPWEQ 60 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCCEEEEEeecCcccccc-------------------cc-ccccccc-------cCHHH
Confidence 5888999999888999999999999999999853 3321 00 0000000 01111
Q ss_pred HhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 164 ATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
+++ .....++.+.. +....... +--.|++++|+-++++ +.+++||-|.+..-+.
T Consensus 61 R~~--------------iA~~lL~~l~~-l~~~~~~~-~~lcDv~~~nfgv~~~-~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 61 RAK--------------IALQLLELLEE-LDHGPLGF-FYLCDVSPDNFGVNDD-GRLKLIDLDDVFVEDK 114 (188)
T ss_pred HHH--------------HHHHHHHHHHH-HhcCCCCc-EEEeecchHHeEEeCC-CcEEEEechhcchhHH
Confidence 111 01112222222 22223333 7777999999999986 7899999998776544
No 448
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=90.54 E-value=0.36 Score=47.99 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=27.9
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..+-++|+||+++||+++++.|.|.|=|...|.
T Consensus 162 ~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt 194 (632)
T KOG0584|consen 162 QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT 194 (632)
T ss_pred CCCCccccccccceEEEcCCcCceeecchhHHH
Confidence 444789999999999999988999999976554
No 449
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=90.53 E-value=6.7 Score=33.89 Aligned_cols=69 Identities=19% Similarity=0.287 Sum_probs=41.6
Q ss_pred EEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-----------------ccccchHHHHHHHHHHh-cCCC----C
Q 018207 42 IPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-----------------EVFFDRNDEIRTFEFMS-KHGQ----G 99 (359)
Q Consensus 42 ~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-----------------~~~~dr~~E~~~l~~l~-~~gl----~ 99 (359)
.+++.|..=.+|.-- ++...++|+..... ...-...+|..-...+. ..+. .
T Consensus 7 ~~i~~G~~R~cy~HP-------~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i 79 (199)
T PF10707_consen 7 DLIAQGGERDCYQHP-------DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHI 79 (199)
T ss_pred cccccCCCceEEECC-------CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccc
Confidence 456677655555541 25677888876543 00111235777777777 5554 4
Q ss_pred ceeEEEeCC----ceEEEeecC
Q 018207 100 PRLLGRFHN----GRVEEFINA 117 (359)
Q Consensus 100 P~~~~~~~~----g~v~e~i~G 117 (359)
|++++..+. |.|+|-|-.
T Consensus 80 ~r~~G~veT~~G~Glv~e~I~d 101 (199)
T PF10707_consen 80 PRFYGFVETNLGLGLVVELIRD 101 (199)
T ss_pred ccEeEEEecCCceEEEEEEEEC
Confidence 788887642 589998853
No 450
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=90.33 E-value=0.28 Score=45.45 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=77.2
Q ss_pred EEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc-ccccchHHHHHHHHHHhcCCCCceeEEEeC------C--c-
Q 018207 40 QVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV-EVFFDRNDEIRTFEFMSKHGQGPRLLGRFH------N--G- 109 (359)
Q Consensus 40 ~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~-~~~~dr~~E~~~l~~l~~~gl~P~~~~~~~------~--g- 109 (359)
.-+.++.|....+|.....+ .+...-+|...... ...-..++|..+|..|. .|.++.... + .
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~----~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~----~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKK----TGELMAVKSVELEDSPTSESLEREIRILSRLN----HPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred hhccccCccceEEEEEEecC----CCcceeeeeeecccchhHHHHHHHHHHHHhCC----CCCEEeeCCccccccCeeeE
Confidence 34667889999999998653 14555566543221 11111357777777766 454443322 1 2
Q ss_pred eEEEeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHH
Q 018207 110 RVEEFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTL 189 (359)
Q Consensus 110 ~v~e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 189 (359)
++|||++|..+. +.+.+.-. .. | -..+..|..++ .+-+..|
T Consensus 93 i~mEy~~~GsL~--------------~~~~~~g~-~l-----~--E~~v~~ytr~i-----------------L~GL~yl 133 (313)
T KOG0198|consen 93 IFMEYAPGGSLS--------------DLIKRYGG-KL-----P--EPLVRRYTRQI-----------------LEGLAYL 133 (313)
T ss_pred eeeeccCCCcHH--------------HHHHHcCC-CC-----C--HHHHHHHHHHH-----------------HHHHHHH
Confidence 688999886553 12221111 11 1 11233333221 1112222
Q ss_pred HHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 190 EKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 190 ~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
+...++|+|++|.|||+++.++.+.|-||..+..
T Consensus 134 --------Hs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 134 --------HSKGIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred --------HhCCEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 1348999999999999998336889999986653
No 451
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.16 E-value=0.13 Score=50.96 Aligned_cols=37 Identities=30% Similarity=0.402 Sum_probs=32.4
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhH
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDI 238 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dl 238 (359)
..||+|++.||||+.+. +.|.|-||..|++.+|+--+
T Consensus 146 ~~IHRDiKAGNILLse~-g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 146 NRIHRDIKAGNILLSEP-GLVKLADFGSASIMAPANSF 182 (948)
T ss_pred hHHhhhccccceEecCC-CeeeeccccchhhcCchhcc
Confidence 56999999999999985 78889999999988887544
No 452
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=90.12 E-value=0.16 Score=45.80 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=27.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
-.+.|+|++|+||+++.+ +.|.|=||..+..
T Consensus 147 ~~VmHRDIKPaNIFl~~~-gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 147 GTVMHRDIKPANIFLTAN-GVVKLGDFGLGRF 177 (375)
T ss_pred cceeeccCcchheEEcCC-CceeeccchhHhH
Confidence 479999999999999986 7888999987654
No 453
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=90.01 E-value=0.19 Score=48.44 Aligned_cols=32 Identities=16% Similarity=0.375 Sum_probs=28.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccCC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN 232 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~ 232 (359)
..++|+|++|.|+|++++ +.|.|=||.-+...
T Consensus 229 QgiiHRDIKPsNLLl~~~-g~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 229 QGIIHRDIKPSNLLLSSD-GTVKISDFGVSNEF 260 (576)
T ss_pred cCeeccccchhheEEcCC-CcEEeeccceeeec
Confidence 489999999999999997 88999999877633
No 454
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.49 E-value=0.26 Score=47.44 Aligned_cols=32 Identities=34% Similarity=0.562 Sum_probs=27.3
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
+..++-|+|++|.|||+... ..+.|=||..|+
T Consensus 127 Hk~GfFHRDlKPENiLi~~~-~~iKiaDFGLAR 158 (538)
T KOG0661|consen 127 HKHGFFHRDLKPENILISGN-DVIKIADFGLAR 158 (538)
T ss_pred HhcCcccccCChhheEeccc-ceeEeccccccc
Confidence 45699999999999999963 578899999876
No 455
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=88.80 E-value=0.58 Score=43.94 Aligned_cols=57 Identities=23% Similarity=0.344 Sum_probs=38.1
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCC-------------------CCceEEEEEeeccCCch
Q 018207 177 FRLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEV-------------------TKSITLIDYEYASYNPV 234 (359)
Q Consensus 177 ~~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~-------------------~~~v~lIDwE~a~~~~~ 234 (359)
+..+.++....+|-+.+. .-....++|-||+|.|||+-++ +-.|.+|||..|...+-
T Consensus 189 fpi~~ir~m~~QL~~sv~-fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e 264 (415)
T KOG0671|consen 189 FPIDHIRHMGYQLLESVA-FLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE 264 (415)
T ss_pred cchHHHHHHHHHHHHHHH-HHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc
Confidence 455556555555554442 2456689999999999998542 12477999998776443
No 456
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=88.52 E-value=0.51 Score=42.01 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=23.6
Q ss_pred eEEeccCCCCCeeEeCCCCc-------eEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKS-------ITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~-------v~lIDwE~a~ 230 (359)
.++|+|++|.||+++.++.. +.+.||..+.
T Consensus 120 ~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 120 GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 68999999999999875322 5688887654
No 457
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=88.27 E-value=0.22 Score=52.81 Aligned_cols=30 Identities=27% Similarity=0.637 Sum_probs=26.3
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
..+++|+|++|+|||++.. |-+.|=||..|
T Consensus 193 ~mgyVHRDiKPDNvLld~~-GHikLADFGsC 222 (1317)
T KOG0612|consen 193 SMGYVHRDIKPDNVLLDKS-GHIKLADFGSC 222 (1317)
T ss_pred hccceeccCCcceeEeccc-CcEeeccchhH
Confidence 4589999999999999987 78999999765
No 458
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=87.90 E-value=0.38 Score=47.59 Aligned_cols=34 Identities=29% Similarity=0.549 Sum_probs=29.4
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
-....++|+|++-.|++++.+ |-+.+|||.-|.+
T Consensus 686 lh~~~ivhrdikdenvivd~~-g~~klidfgsaa~ 719 (772)
T KOG1152|consen 686 LHDQGIVHRDIKDENVIVDSN-GFVKLIDFGSAAY 719 (772)
T ss_pred ccccCceecccccccEEEecC-CeEEEeeccchhh
Confidence 455699999999999999986 7888999997765
No 459
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=87.40 E-value=0.65 Score=44.80 Aligned_cols=44 Identities=14% Similarity=0.188 Sum_probs=34.5
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHH
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANH 241 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~ 241 (359)
..++.+.|+|++..|||+..| ....|=||..|..-.|..--+..
T Consensus 332 ~~Kp~IaHRDlkSkNVLvK~D-lTccIaDFGLAl~~~p~~~~~d~ 375 (534)
T KOG3653|consen 332 HHKPPIAHRDLKSKNVLVKND-LTCCIADFGLALRLEPGKPQGDT 375 (534)
T ss_pred CCCCccccccccccceEEccC-CcEEeeccceeEEecCCCCCcch
Confidence 455699999999999999886 67889999998865554444433
No 460
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=87.27 E-value=0.74 Score=43.46 Aligned_cols=43 Identities=30% Similarity=0.454 Sum_probs=35.5
Q ss_pred CCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHH
Q 018207 196 NDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIAN 240 (359)
Q Consensus 196 ~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~ 240 (359)
.....-+-|+|++-+|||+++ |.|.||||-.|+...+.-++.+
T Consensus 337 lekkf~fehrnlt~~niLId~--GnvtLIDfklsRl~~~q~~isy 379 (488)
T COG5072 337 LEKKFPFEHRNLTLDNILIDE--GNVTLIDFKLSRLSYSQGIISY 379 (488)
T ss_pred hhhcCCcccccccccceeeec--CceEEEEeeeeecccCCceeec
Confidence 455667899999999999994 7899999999998777666544
No 461
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=86.61 E-value=0.39 Score=42.72 Aligned_cols=50 Identities=24% Similarity=0.387 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 178 RLDAIEEEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 178 ~~~~l~~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
....+++.++.|..-+. .-.+.-++|+|.++.|+|++.+ +.+.+-||..+
T Consensus 122 sls~Ikk~Mk~Lm~GL~-~iHr~kilHRDmKaaNvLIt~d-gilklADFGla 171 (376)
T KOG0669|consen 122 SLSEIKKVMKGLMNGLY-YIHRNKILHRDMKAANVLITKD-GILKLADFGLA 171 (376)
T ss_pred cHHHHHHHHHHHHHHHH-HHHHhhHHhhcccHhhEEEcCC-ceEEeeccccc
Confidence 34445555554443321 1234468999999999999987 78889999988
No 462
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=86.52 E-value=0.38 Score=48.17 Aligned_cols=30 Identities=30% Similarity=0.482 Sum_probs=26.5
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
-++|+||+.||||++-+ |.+.|-||.-+.-
T Consensus 150 ~iIHRDLKAGNiL~Tld-GdirLADFGVSAK 179 (1187)
T KOG0579|consen 150 NIIHRDLKAGNILLTLD-GDIRLADFGVSAK 179 (1187)
T ss_pred chhhhhccccceEEEec-CcEeeeccccccc
Confidence 68999999999999987 8899999986653
No 463
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=86.13 E-value=0.46 Score=43.58 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=24.1
Q ss_pred eEEeccCCCCCeeEeCC---CCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEV---TKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~---~~~v~lIDwE~a~ 230 (359)
=+.|+||+|.|||+..+ .|.|.|=|+.+|+
T Consensus 152 WvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR 184 (438)
T KOG0666|consen 152 WVLHRDLKPANILVMGDGPERGRVKIADLGLAR 184 (438)
T ss_pred heeeccCCcceEEEeccCCccCeeEeecccHHH
Confidence 57899999999999875 2567788877665
No 464
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=85.85 E-value=0.59 Score=41.10 Aligned_cols=29 Identities=28% Similarity=0.354 Sum_probs=24.5
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEE
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDY 226 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDw 226 (359)
.....++|||.+|.|||.+.. |-+.++|-
T Consensus 159 ~~~~~~lHGD~np~NiM~D~~-G~lKlVDP 187 (308)
T PF07387_consen 159 SENQHCLHGDCNPDNIMCDKF-GYLKLVDP 187 (308)
T ss_pred ccCCCeecCCCChhheeecCC-CCEEecCh
Confidence 456689999999999999986 77888873
No 465
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=83.88 E-value=0.75 Score=45.65 Aligned_cols=44 Identities=23% Similarity=0.508 Sum_probs=33.7
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhh
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAA 247 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~ 247 (359)
...+||+||+..|++++.+ -.+.|-||+++.. ||.+.++-.+++
T Consensus 173 ~k~ivHrdLk~eNilL~~~-mnikIaDfgfS~~----~~~~~~lqt~cg 216 (596)
T KOG0586|consen 173 SKNIVHRDLKAENILLDEN-MNIKIADFGFSTF----FDYGLMLQTFCG 216 (596)
T ss_pred hcceeccccchhhcccccc-cceeeecccccee----ecccccccccCC
Confidence 4589999999999999986 5688999999875 444445444444
No 466
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=83.32 E-value=0.94 Score=43.52 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=27.4
Q ss_pred CCceeEEeccCCCCCeeEeCC--CCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEV--TKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~--~~~v~lIDwE~a~~ 231 (359)
....-++|-||+|+|||+-+. -+.+.|-||..+.+
T Consensus 586 EikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 586 EIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 344468999999999999653 26788999988764
No 467
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=83.04 E-value=0.54 Score=43.05 Aligned_cols=31 Identities=23% Similarity=0.400 Sum_probs=22.2
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
.+++|||+++.|++++++ |.+.|=||+....
T Consensus 164 ~GlVHgdi~~~nfll~~~-G~v~Lg~F~~~~r 194 (288)
T PF14531_consen 164 YGLVHGDIKPENFLLDQD-GGVFLGDFSSLVR 194 (288)
T ss_dssp TTEEEST-SGGGEEE-TT-S-EEE--GGGEEE
T ss_pred cceEecccceeeEEEcCC-CCEEEcChHHHee
Confidence 379999999999999997 8899999976553
No 468
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=82.07 E-value=1 Score=42.76 Aligned_cols=46 Identities=20% Similarity=0.413 Sum_probs=34.3
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHHHhhc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCEMAAD 248 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e~~~~ 248 (359)
....++|+||+..|||++++ +.+.|-||..+.+ |-=..|+..+|+.
T Consensus 170 HknrVvHRDLKLENILLD~N-~NiKIADFGLSNl----y~~~kfLqTFCGS 215 (668)
T KOG0611|consen 170 HKNRVVHRDLKLENILLDQN-NNIKIADFGLSNL----YADKKFLQTFCGS 215 (668)
T ss_pred hhccceecccchhheeecCC-CCeeeeccchhhh----hccccHHHHhcCC
Confidence 34588999999999999986 7899999987654 2223455555554
No 469
>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.
Probab=81.35 E-value=2.4 Score=37.82 Aligned_cols=58 Identities=12% Similarity=0.171 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHhHHHHHHH
Q 018207 184 EEISTLEKALYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYDIANHFCE 244 (359)
Q Consensus 184 ~~~~~l~~~l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~Dla~~~~e 244 (359)
..+..|.........|..++|||+. +|+|+.+. ....|||+-- ..-+..|=-|..+..
T Consensus 158 ~l~~~l~~lrrpv~~p~QlvHgDl~-gt~lF~g~-~~P~itDi~p-ywRP~~waaAvvvVD 215 (272)
T TIGR02569 158 DLINQIAGLLKPIKSPNQVVHADMY-ATTLYAGT-QPPGVTDLVP-VWRPAGWTAAVAIVD 215 (272)
T ss_pred HHHHHHHHHhcccCCCcceeeeecc-cceeecCC-CCCceeeccc-ccCcchhhhHHHHHH
Confidence 3445555555556788899999998 68999885 6789999862 334566666655543
No 470
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.14 E-value=9 Score=39.38 Aligned_cols=31 Identities=13% Similarity=0.369 Sum_probs=25.0
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
..-++|+|++.+|+|++--.|.+.|=||..+
T Consensus 693 en~IVHRDIKGDNVLvNTySGvlKISDFGTs 723 (1226)
T KOG4279|consen 693 ENKIVHRDIKGDNVLVNTYSGVLKISDFGTS 723 (1226)
T ss_pred hcceeeccccCCcEEEeeccceEEecccccc
Confidence 3478999999999999875566778888754
No 471
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.08 E-value=2.2 Score=41.56 Aligned_cols=55 Identities=15% Similarity=0.029 Sum_probs=37.3
Q ss_pred CCCeEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCC---cccccchHHHHHHHHHHhcCC
Q 018207 36 RNSLQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEG---VEVFFDRNDEIRTFEFMSKHG 97 (359)
Q Consensus 36 ~~~~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~---~~~~~dr~~E~~~l~~l~~~g 97 (359)
....-++.|+.|.-.+||++-... ..+.+-+||-... ++..+ .|+.+|+.+++..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq----~~r~VAlKVvKSAqhYtEaAl---DEIklL~~v~~~D 135 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQ----NKRYVALKVVKSAQHYTEAAL---DEIKLLQQVREGD 135 (590)
T ss_pred ceEEEEEeccccccceeEEEeecc----CCeEEEEEEEehhhHHHHHHH---HHHHHHHHHHhcC
Confidence 445567888999999999996442 2345558886532 22223 4899999888765
No 472
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=80.92 E-value=2 Score=39.68 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=26.1
Q ss_pred CCceeEEeccCCCCCeeEeCCC--CceEEEEEeecc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVT--KSITLIDYEYAS 230 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~--~~v~lIDwE~a~ 230 (359)
-...++.|+|++|.|||...-+ ..|.|-|||.++
T Consensus 192 lH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 192 LHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred HhhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence 3456899999999999997531 346799998755
No 473
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=80.28 E-value=1.6 Score=42.92 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=27.1
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
....++|+||+|.|+.+=+..|-|.|-||.++.
T Consensus 135 HqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 135 HQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSN 167 (864)
T ss_pred hhhhhhcccCCcceeEEeeecCceEeeeccccc
Confidence 345789999999999987765778899999864
No 474
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=77.76 E-value=2.1 Score=43.68 Aligned_cols=40 Identities=25% Similarity=0.478 Sum_probs=33.7
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCchHHh
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPVAYD 237 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~~~D 237 (359)
....++.|+|+++.|+++... +.+.++||.-+...-..++
T Consensus 436 ~h~~GiahrdlK~enll~~~~-g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 436 LHSMGLAHRDLKLENLLVTEN-GILKIIDFGAASVFRYPWE 475 (601)
T ss_pred HHhcCceeccCccccEEEecC-CceEEeecCcceeeccCcc
Confidence 345699999999999999986 7889999998887666555
No 475
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=76.98 E-value=2 Score=38.26 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=27.0
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
...++.=||=|++|||++.++|.+.-|||.++
T Consensus 134 ~~YilglgDRH~~NIli~~~tG~v~HIDfg~~ 165 (235)
T cd05172 134 SHWILGIGDRHLSNFLVDLETGGLVGIDFGHA 165 (235)
T ss_pred HhheeeccCCCcccEEEECCCCcEEEEeeHhh
Confidence 35588889999999999965689999999854
No 476
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=76.27 E-value=2.8 Score=37.90 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=27.2
Q ss_pred CCceeEEeccCCCCCeeEe-CCCCceEEEEEeeccC
Q 018207 197 DQHIGFCHNDLQYGNIMID-EVTKSITLIDYEYASY 231 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~-~~~~~v~lIDwE~a~~ 231 (359)
....-++|+|++..|||+= .+-.+|.|-||.....
T Consensus 137 MHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 137 MHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred hhccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 4455789999999999983 3335788999987654
No 477
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=75.85 E-value=2.2 Score=37.43 Aligned_cols=35 Identities=26% Similarity=0.171 Sum_probs=27.8
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccCCch
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNPV 234 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~~ 234 (359)
.++.=||=|++|||++..+|.+.-|||.++--..+
T Consensus 128 YilglgDRh~~NIli~~~~G~~~hIDfg~~~~~~~ 162 (219)
T cd00142 128 YILGIGDRHPDNIMIDLDTGKLFHIDFGFIFGKRK 162 (219)
T ss_pred HHhccCCCCCccEEEECCCCeEEEEeeHHhhCcCc
Confidence 36667899999999998558999999997644333
No 478
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=75.06 E-value=2.3 Score=39.46 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=27.2
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
...++.=||-|++|||++..+|.+.-|||..+
T Consensus 207 ~~yilglgDRh~~NIli~~~tG~v~hiDf~~~ 238 (307)
T cd05170 207 IGYVIGLGDRHLDNVLIDLKTGEVVHIDYNVC 238 (307)
T ss_pred HHHHccCCCCCCccEEEEcCCCcEEEEeeHhh
Confidence 34578889999999999976689999999864
No 479
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=74.88 E-value=2.2 Score=38.96 Aligned_cols=32 Identities=31% Similarity=0.279 Sum_probs=27.2
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
...++.=||-||+||+++..+|.+.-|||..+
T Consensus 179 ~~yilglgDRh~~NIll~~~tG~v~hiDf~~~ 210 (279)
T cd05171 179 VGYILGLGDRHANNILIDEKTAEVVHIDLGIA 210 (279)
T ss_pred HHHhhccCCCCcccEEEEcCcCcEEEEechhh
Confidence 34577889999999999976689999999875
No 480
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=74.64 E-value=2.3 Score=37.88 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=26.3
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
..++-=||=|++|||++..+|.+.-|||.++-
T Consensus 138 ~YilgigDRh~~NIli~~~tG~~~HIDfg~~~ 169 (237)
T cd00892 138 GYILGLGDRHGENILFDSNTGDVVHVDFNCLF 169 (237)
T ss_pred HHHhccCCCCcccEEEEcCCCcEEEEehHhhh
Confidence 34667789999999999855899999998643
No 481
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=74.61 E-value=2 Score=42.71 Aligned_cols=31 Identities=23% Similarity=0.411 Sum_probs=27.1
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
...+.|+|++|.|||+.+. +.+.+-||.+|.
T Consensus 118 s~rilhrd~kPqniLl~~~-~~~KlcdFg~Ar 148 (808)
T KOG0597|consen 118 SNRILHRDMKPQNILLEKG-GTLKLCDFGLAR 148 (808)
T ss_pred hcCcccccCCcceeeecCC-Cceeechhhhhh
Confidence 3478999999999999985 788999998876
No 482
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
Probab=74.40 E-value=3 Score=37.55 Aligned_cols=31 Identities=16% Similarity=0.049 Sum_probs=26.4
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
..++.=||-||+||+++.++|.+.-|||..+
T Consensus 153 gYilglgdRh~~nili~~~tG~v~hiDf~~~ 183 (253)
T cd05163 153 TYILSINNRNPDKIFISRDTGNVYQSDLLPS 183 (253)
T ss_pred HHHhcCCCCCchhEEEEcCCCcEEEEeeeee
Confidence 3467779999999999987799999999843
No 483
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=73.27 E-value=0.98 Score=41.20 Aligned_cols=27 Identities=30% Similarity=0.513 Sum_probs=23.3
Q ss_pred EeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 203 CHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 203 ~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
+|+|++.||||++-+ +-..|-||.-||
T Consensus 151 IHRDIKAGNILLNT~-G~AKLADFGVAG 177 (502)
T KOG0574|consen 151 IHRDIKAGNILLNTD-GIAKLADFGVAG 177 (502)
T ss_pred HHhhcccccEEEccc-chhhhhhccccc
Confidence 799999999999876 666799998776
No 484
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=73.17 E-value=1.8 Score=38.34 Aligned_cols=36 Identities=14% Similarity=0.356 Sum_probs=29.6
Q ss_pred CCceeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 197 DQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
-....++|+|++|.|+|..-. +.+.+=||..+-..+
T Consensus 140 ~h~k~VIhRdiKpenlLlg~~-~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 140 CHLKRVIHRDIKPENLLLGSA-GELKIADFGWSVHAP 175 (281)
T ss_pred hccCCcccCCCCHHHhccCCC-CCeeccCCCceeecC
Confidence 344588999999999999876 788899998877654
No 485
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=72.97 E-value=1.6 Score=42.73 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=27.4
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
+...++-+||+|.|+|++.+ +-+.|+||.+|.
T Consensus 537 H~k~iIYRDLKPENllLd~~-Gy~KLVDFGFAK 568 (732)
T KOG0614|consen 537 HRKGIIYRDLKPENLLLDNR-GYLKLVDFGFAK 568 (732)
T ss_pred HhcCceeccCChhheeeccC-CceEEeehhhHH
Confidence 34588999999999999986 788999998764
No 486
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=72.41 E-value=1.1 Score=47.86 Aligned_cols=29 Identities=31% Similarity=0.682 Sum_probs=22.8
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEe
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYE 227 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE 227 (359)
+...+||||++..|||++.- +-+.|-||-
T Consensus 137 H~~gVcHGDIKsENILiTSW-NW~~LtDFA 165 (1431)
T KOG1240|consen 137 HKLGVCHGDIKSENILITSW-NWLYLTDFA 165 (1431)
T ss_pred HHcCccccccccceEEEeee-chhhhhccc
Confidence 44589999999999999873 556677763
No 487
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=72.06 E-value=2 Score=38.53 Aligned_cols=30 Identities=33% Similarity=0.631 Sum_probs=25.7
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+|++|.||+++.....+.++||..+.
T Consensus 121 ~~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred CeeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 499999999999999862258899999887
No 488
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=71.82 E-value=14 Score=38.07 Aligned_cols=142 Identities=14% Similarity=0.162 Sum_probs=75.1
Q ss_pred EecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcc--cccchHHHHHHHHHHhcCCCCceeEEEeCCceEEEeecCCCC
Q 018207 43 PVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVE--VFFDRNDEIRTFEFMSKHGQGPRLLGRFHNGRVEEFINARTL 120 (359)
Q Consensus 43 ~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~l~~l~~~gl~P~~~~~~~~g~v~e~i~G~~l 120 (359)
.|+.|.-..|.+-.+....+ ..-.+-||+-+.+.. .+-|.-+|+.++-.|..-.+ -++| |..+
T Consensus 117 ~LG~GsFgvV~rg~Wt~psg-k~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hl-iRLy-------------GvVl 181 (1039)
T KOG0199|consen 117 LLGEGSFGVVKRGTWTQPSG-KHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHL-IRLY-------------GVVL 181 (1039)
T ss_pred HhcCcceeeEeeccccCCCC-cEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcce-eEEe-------------eeec
Confidence 34556666677666554221 223555777765532 22334467776655543211 1222 2222
Q ss_pred CCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHHHhcCCCce
Q 018207 121 SASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKALYRNDQHI 200 (359)
Q Consensus 121 ~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 200 (359)
+...+.- ..+.-+|..|.+||....+ +.+...+-.|..+ +.+.+..|+. .
T Consensus 182 ~qp~mMV-~ELaplGSLldrLrka~~~----~llv~~Lcdya~Q-----------------iA~aM~YLes--------k 231 (1039)
T KOG0199|consen 182 DQPAMMV-FELAPLGSLLDRLRKAKKA----ILLVSRLCDYAMQ-----------------IAKAMQYLES--------K 231 (1039)
T ss_pred cchhhHH-hhhcccchHHHHHhhcccc----ceeHHHHHHHHHH-----------------HHHHHHHHhh--------h
Confidence 2110000 1135677888889883322 1222334333322 2233333322 3
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++|+||-..|+++-.. ..|.|-||....
T Consensus 232 rlvHRDLAARNlllasp-rtVKI~DFGLmR 260 (1039)
T KOG0199|consen 232 RLVHRDLAARNLLLASP-RTVKICDFGLMR 260 (1039)
T ss_pred hhhhhhhhhhhheeccc-ceeeeeccccee
Confidence 78999999999999764 678899998765
No 489
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=71.40 E-value=8.2 Score=37.30 Aligned_cols=29 Identities=31% Similarity=0.356 Sum_probs=20.1
Q ss_pred eEEeccCCCCCeeEeCCC---CceEEEEEeec
Q 018207 201 GFCHNDLQYGNIMIDEVT---KSITLIDYEYA 229 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~---~~v~lIDwE~a 229 (359)
-++|+|+|||||++.... +...++|=|-+
T Consensus 365 NFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~ 396 (565)
T KOG1236|consen 365 NFVHADLHPGNVLIRFNKTEDNLRGVHKAEKA 396 (565)
T ss_pred cceecccCCCcEEEEecCCCccccccccchhh
Confidence 589999999999996532 22346665544
No 490
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=71.38 E-value=41 Score=30.54 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=12.3
Q ss_pred cCCCCCeeEeCC--CCceEEEEEeeccCCchHHhHHH
Q 018207 206 DLQYGNIMIDEV--TKSITLIDYEYASYNPVAYDIAN 240 (359)
Q Consensus 206 Dl~~~Nil~~~~--~~~v~lIDwE~a~~~~~~~Dla~ 240 (359)
.=++.|||+.+. +.-+..||-...+.++..||.+.
T Consensus 183 ~gN~~Nil~~~~p~~~~~~~i~~~i~~i~~~~f~~~~ 219 (275)
T PF09192_consen 183 EGNPSNILFYEKPNGWYFSLIDSNITCIDNSSFTIGY 219 (275)
T ss_dssp ---GGGEEEESB--TT-EEE-S-------SS------
T ss_pred CCChhheEEecccccceeeecccccccccchhhhhhH
Confidence 377889999764 12266888888888777777753
No 491
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=71.26 E-value=2.8 Score=38.33 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=27.0
Q ss_pred CceeEEeccCCCCCeeEeCCCCceEEEEEeec
Q 018207 198 QHIGFCHNDLQYGNIMIDEVTKSITLIDYEYA 229 (359)
Q Consensus 198 ~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a 229 (359)
...++-=||=|++|||++..+|.+.=|||..+
T Consensus 179 ~~YilglgDRH~~NIll~~~tG~v~HIDfg~~ 210 (280)
T cd05169 179 VGYILGLGDRHPSNIMIDRLTGKVIHIDFGDC 210 (280)
T ss_pred HHhheeccCCCcceEEEEcCCCCEEEEecHHH
Confidence 44578889999999999986689999999743
No 492
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=70.89 E-value=3 Score=36.76 Aligned_cols=31 Identities=26% Similarity=0.288 Sum_probs=25.8
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.++.=||-||+||+++..+|.+.=|||.++-
T Consensus 131 YvlglgDRh~~NIli~~~tG~v~hIDf~~~~ 161 (222)
T cd05164 131 YILGLGDRHLDNILIDRETGEVVHIDFGCIF 161 (222)
T ss_pred HHhccCCCCCceEEEECCCCcEEEEccHHhh
Confidence 4667789999999999966889899998653
No 493
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=70.60 E-value=3.4 Score=35.78 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=26.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeeccCCc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYASYNP 233 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~~ 233 (359)
.++-=||-|++||++++ +|.+.=|||.++--..
T Consensus 101 YilglgDRh~~NIli~~-~G~v~hIDfg~~~~~~ 133 (202)
T smart00146 101 YILGLGDRHNDNIMLDK-TGHLFHIDFGFILGNG 133 (202)
T ss_pred HHhcCCCCCCCcEEEeC-CCCEEEEechhhhCcc
Confidence 35566899999999996 5899999998765433
No 494
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=68.69 E-value=3 Score=43.20 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=24.4
Q ss_pred eeEEeccCCCCCeeEeC---C-CCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDE---V-TKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~---~-~~~v~lIDwE~a~ 230 (359)
..++|+||+|.|||+.. + ...+.|=||..|.
T Consensus 625 l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 625 LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred cccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 68999999999999976 2 1345588998775
No 495
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=67.62 E-value=2.6 Score=41.95 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=25.0
Q ss_pred eEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 201 GFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 201 vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
-+||+||+..|||+.-+ ..|.|-||..+.
T Consensus 232 KIIHRDLKSPNiLIs~~-d~VKIsDFGTS~ 260 (904)
T KOG4721|consen 232 KIIHRDLKSPNILISYD-DVVKISDFGTSK 260 (904)
T ss_pred hHhhhccCCCceEeecc-ceEEeccccchH
Confidence 57999999999999876 678899998654
No 496
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=67.55 E-value=51 Score=29.21 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=30.0
Q ss_pred eEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCcccccchHHHHHHHHHHhcCCC-Cce
Q 018207 39 LQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGVEVFFDRNDEIRTFEFMSKHGQ-GPR 101 (359)
Q Consensus 39 ~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~l~~l~~~gl-~P~ 101 (359)
++...+++|.+--...++. +...+|+|.... +..|.-..+...-.|+ .|.
T Consensus 2 ie~i~~s~s~~~~~~F~~s------~~~a~ViK~s~t-------i~~E~~~~~La~~LgVpiPq 52 (238)
T cd05124 2 IKAIDLSDSGVFGALFVES------ESGAIVVKSSPN-------IASEYFLSKLAKILGLPIPQ 52 (238)
T ss_pred ceEEEecCCceEEEEEEcC------CCcEEEEEcCcc-------HHHHHHHHHHHHHhCCCCCc
Confidence 4556677766544444432 247889987531 2467777777777777 463
No 497
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=66.84 E-value=2.9 Score=41.78 Aligned_cols=30 Identities=27% Similarity=0.520 Sum_probs=27.0
Q ss_pred eeEEeccCCCCCeeEeCCCCceEEEEEeecc
Q 018207 200 IGFCHNDLQYGNIMIDEVTKSITLIDYEYAS 230 (359)
Q Consensus 200 ~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~ 230 (359)
.-++|+|+.+.|+|++++ ..+++-||.+++
T Consensus 656 ~nfVHrd~a~rNcLv~~e-~~iKiadfgmsR 685 (807)
T KOG1094|consen 656 LNFVHRDLATRNCLVDGE-FTIKIADFGMSR 685 (807)
T ss_pred hchhhccccccceeecCc-ccEEecCccccc
Confidence 478999999999999987 788999998776
No 498
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=63.62 E-value=4.7 Score=43.99 Aligned_cols=48 Identities=23% Similarity=0.249 Sum_probs=35.0
Q ss_pred ceeEEeccCCCCCeeEeCCCCceEEEEEeeccCC-chHHhHHHHHHHHhh
Q 018207 199 HIGFCHNDLQYGNIMIDEVTKSITLIDYEYASYN-PVAYDIANHFCEMAA 247 (359)
Q Consensus 199 ~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~~-~~~~Dla~~~~e~~~ 247 (359)
..+++|+|++|.||+++.+ +-+.+.||..|..- .++.|+..-+.+++|
T Consensus 1352 ~~gIVHRDIK~aNI~Ld~~-g~iK~~DFGsa~ki~~~~~~~~~el~~~~G 1400 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFN-GLIKYGDFGSAVKIKNNAQTMPGELQSMMG 1400 (1509)
T ss_pred hcCceecCCCccceeeecC-CcEEeecccceeEecCchhcCCHHHHhhcC
Confidence 4489999999999999986 78889999988743 233355544444443
No 499
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=62.97 E-value=5.9 Score=38.06 Aligned_cols=139 Identities=13% Similarity=0.120 Sum_probs=75.6
Q ss_pred eEEEEecCCcceeEEEEEeCCCCCCCCcEEEEEEeCCCc--ccccchHHHHHHHHHHhcCCCCceeEEEe--C--CceEE
Q 018207 39 LQVIPVKGAMTNEVFQIKWLTKTETFSHKVLLRVYGEGV--EVFFDRNDEIRTFEFMSKHGQGPRLLGRF--H--NGRVE 112 (359)
Q Consensus 39 ~~i~~l~gG~~N~~y~v~~~~~~~~~~~~~vlRi~~~~~--~~~~dr~~E~~~l~~l~~~gl~P~~~~~~--~--~g~v~ 112 (359)
..+..|+.|.-..||+..... .++.+-+|+-.-.. +.+-|.+.|..++..+.... .-+.|+.. . =+.+|
T Consensus 16 ~~~~~IgrGsfG~Vyk~~d~~----t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~-it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 16 TKLELIGRGSFGEVYKAIDNK----TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPN-ITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccchhccccccceeeeeeecc----ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcch-HHhhhhheeecccHHHHH
Confidence 355778888899999987542 25666688765332 22345567777776655411 11223222 1 14788
Q ss_pred EeecCCCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCcccchHHHHHHHHHhhcCCChhhhhhcCHHHHHHHHHHHHHH
Q 018207 113 EFINARTLSASDIRDPEISALIAAKLKEFHDLDMPGQKIVRLWDRSRNWLIATKNLSPPEEARAFRLDAIEEEISTLEKA 192 (359)
Q Consensus 113 e~i~G~~l~~~~l~~~~~~~~la~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 192 (359)
||+.|-.+... +. .+ ... .+..+- .-...+...+..+
T Consensus 91 ey~~gGsv~~l-L~-------~~----------~~~-~E~~i~---------------------~ilre~l~~l~yl--- 127 (467)
T KOG0201|consen 91 EYCGGGSVLDL-LK-------SG----------NIL-DEFEIA---------------------VILREVLKGLDYL--- 127 (467)
T ss_pred HHhcCcchhhh-hc-------cC----------CCC-ccceee---------------------eehHHHHHHhhhh---
Confidence 88887543210 00 00 000 000000 0000111111111
Q ss_pred HhcCCCceeEEeccCCCCCeeEeCCCCceEEEEEeeccC
Q 018207 193 LYRNDQHIGFCHNDLQYGNIMIDEVTKSITLIDYEYASY 231 (359)
Q Consensus 193 l~~~~~~~vl~HgDl~~~Nil~~~~~~~v~lIDwE~a~~ 231 (359)
....-+|+|+++.||++..+ +.+.+-||..++.
T Consensus 128 -----H~~~kiHrDIKaanil~s~~-g~vkl~DfgVa~q 160 (467)
T KOG0201|consen 128 -----HSEKKIHRDIKAANILLSES-GDVKLADFGVAGQ 160 (467)
T ss_pred -----hhcceecccccccceeEecc-CcEEEEecceeee
Confidence 22366999999999999987 8899999998764
No 500
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=59.65 E-value=8.3 Score=36.34 Aligned_cols=21 Identities=33% Similarity=0.377 Sum_probs=17.4
Q ss_pred CCceeEEeccCCCCCeeEeCC
Q 018207 197 DQHIGFCHNDLQYGNIMIDEV 217 (359)
Q Consensus 197 ~~~~vl~HgDl~~~Nil~~~~ 217 (359)
+...-++|.|++|+|||+=++
T Consensus 295 p~c~nF~H~DLKPdNILiFds 315 (434)
T PF05445_consen 295 PCCTNFLHVDLKPDNILIFDS 315 (434)
T ss_pred CCcceeeecccCcCcEEEecC
Confidence 445689999999999999654
Done!