Query 018211
Match_columns 359
No_of_seqs 139 out of 1980
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 07:04:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018211.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018211hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0318 CaiC Acyl-CoA syntheta 100.0 2.8E-45 6.2E-50 356.9 28.5 316 1-351 11-340 (534)
2 PTZ00342 acyl-CoA synthetase; 100.0 6E-45 1.3E-49 363.5 29.8 319 2-347 62-505 (746)
3 KOG1177 Long chain fatty acid 100.0 1.3E-44 2.8E-49 323.5 26.7 316 2-352 51-400 (596)
4 COG1022 FAA1 Long-chain acyl-C 100.0 2.8E-44 6E-49 343.9 29.6 320 2-351 17-400 (613)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 1.1E-44 2.3E-49 342.3 24.8 304 7-348 15-335 (528)
6 KOG1176 Acyl-CoA synthetase [L 100.0 8.3E-44 1.8E-48 337.9 28.1 310 10-352 25-349 (537)
7 PLN02736 long-chain acyl-CoA s 100.0 1.9E-43 4.2E-48 352.4 29.2 317 2-347 45-420 (651)
8 PRK07788 acyl-CoA synthetase; 100.0 1.9E-43 4.2E-48 346.3 27.4 311 2-347 50-367 (549)
9 PLN02861 long-chain-fatty-acid 100.0 3.1E-43 6.7E-48 350.8 27.6 315 2-346 44-426 (660)
10 PLN02614 long-chain acyl-CoA s 100.0 4.1E-43 8.8E-48 349.9 27.2 315 2-346 46-429 (666)
11 PLN02860 o-succinylbenzoate-Co 100.0 1.3E-42 2.7E-47 341.4 29.8 311 2-346 8-332 (563)
12 PRK06334 long chain fatty acid 100.0 9.1E-43 2E-47 340.4 28.0 308 2-347 20-344 (539)
13 PRK08314 long-chain-fatty-acid 100.0 3.6E-42 7.9E-47 337.1 28.0 312 1-347 10-349 (546)
14 PRK13295 cyclohexanecarboxylat 100.0 1E-41 2.2E-46 334.0 30.3 312 2-348 25-357 (547)
15 PRK08180 feruloyl-CoA synthase 100.0 8.3E-42 1.8E-46 338.6 29.5 314 2-347 40-384 (614)
16 TIGR02316 propion_prpE propion 100.0 1.5E-41 3.2E-46 337.7 30.5 310 4-346 55-397 (628)
17 PRK07529 AMP-binding domain pr 100.0 1.1E-41 2.5E-46 338.5 28.6 310 2-348 26-378 (632)
18 PLN02654 acetate-CoA ligase 100.0 1.1E-41 2.3E-46 340.1 28.4 312 2-346 88-443 (666)
19 PRK13382 acyl-CoA synthetase; 100.0 1.6E-41 3.4E-46 331.8 28.9 311 2-347 44-356 (537)
20 PRK07656 long-chain-fatty-acid 100.0 1.3E-41 2.8E-46 330.6 27.9 314 1-349 5-328 (513)
21 PLN02387 long-chain-fatty-acid 100.0 1.1E-41 2.4E-46 341.2 28.1 318 2-347 59-464 (696)
22 PF00501 AMP-binding: AMP-bind 100.0 2.7E-42 5.9E-47 326.9 21.3 307 7-347 1-322 (417)
23 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.5E-41 7.7E-46 335.1 29.4 311 4-347 60-405 (625)
24 PRK12582 acyl-CoA synthetase; 100.0 4.4E-41 9.6E-46 334.0 29.1 315 2-345 50-394 (624)
25 PRK06839 acyl-CoA synthetase; 100.0 7.1E-41 1.5E-45 324.1 29.2 303 2-346 3-306 (496)
26 PLN02246 4-coumarate--CoA liga 100.0 5.2E-41 1.1E-45 328.3 28.4 311 1-346 23-342 (537)
27 PTZ00216 acyl-CoA synthetase; 100.0 6E-41 1.3E-45 336.5 28.7 321 2-347 70-471 (700)
28 KOG1256 Long-chain acyl-CoA sy 100.0 4E-41 8.7E-46 318.3 25.3 321 1-350 75-466 (691)
29 PRK05605 long-chain-fatty-acid 100.0 8.4E-41 1.8E-45 329.3 28.3 314 1-349 32-382 (573)
30 PTZ00237 acetyl-CoA synthetase 100.0 1.1E-40 2.3E-45 331.9 27.6 312 4-346 62-423 (647)
31 KOG1179 Very long-chain acyl-C 100.0 8.8E-41 1.9E-45 304.7 24.5 309 2-347 78-400 (649)
32 PRK08279 long-chain-acyl-CoA s 100.0 1.3E-40 2.9E-45 329.5 27.6 308 1-345 37-355 (600)
33 PLN03102 acyl-activating enzym 100.0 2.1E-40 4.5E-45 326.5 28.6 308 2-346 15-342 (579)
34 PRK04319 acetyl-CoA synthetase 100.0 1.4E-40 3E-45 327.4 27.2 307 5-346 47-366 (570)
35 PLN03052 acetate--CoA ligase; 100.0 1.5E-40 3.2E-45 333.4 27.6 308 2-345 175-514 (728)
36 PRK03640 O-succinylbenzoic aci 100.0 2.4E-40 5.2E-45 319.4 28.1 295 1-346 2-296 (483)
37 PLN02430 long-chain-fatty-acid 100.0 1.9E-40 4.2E-45 330.4 28.1 317 2-347 43-427 (660)
38 PRK00174 acetyl-CoA synthetase 100.0 3.7E-40 8E-45 328.4 30.1 309 5-346 71-413 (637)
39 PRK08316 acyl-CoA synthetase; 100.0 4E-40 8.8E-45 320.8 29.4 311 2-347 12-331 (523)
40 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3E-40 6.4E-45 322.2 28.5 308 1-343 23-339 (527)
41 PRK08043 bifunctional acyl-[ac 100.0 5.4E-41 1.2E-45 338.3 23.8 308 1-346 204-522 (718)
42 PRK06187 long-chain-fatty-acid 100.0 3.6E-40 7.7E-45 320.9 28.1 312 1-348 6-326 (521)
43 PRK07514 malonyl-CoA synthase; 100.0 7E-40 1.5E-44 317.9 30.0 306 2-346 4-312 (504)
44 PRK06145 acyl-CoA synthetase; 100.0 5.1E-40 1.1E-44 318.3 28.7 305 1-346 2-308 (497)
45 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 9.5E-40 2E-44 319.5 30.7 311 2-348 23-355 (538)
46 PRK06155 crotonobetaine/carnit 100.0 6.5E-40 1.4E-44 320.7 29.2 309 1-347 21-336 (542)
47 PRK10524 prpE propionyl-CoA sy 100.0 9E-40 2E-44 325.2 29.7 308 4-344 56-396 (629)
48 PRK07786 long-chain-fatty-acid 100.0 1.4E-39 3E-44 318.5 29.9 312 1-349 17-337 (542)
49 PRK05852 acyl-CoA synthetase; 100.0 9.5E-40 2.1E-44 319.2 28.6 312 2-346 17-338 (534)
50 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1E-39 2.2E-44 317.4 28.6 305 3-344 2-316 (515)
51 PRK07638 acyl-CoA synthetase; 100.0 1E-39 2.2E-44 315.5 27.9 298 1-348 1-299 (487)
52 PRK09274 peptide synthase; Pro 100.0 6.8E-40 1.5E-44 321.5 26.2 303 1-346 6-333 (552)
53 PRK06087 short chain acyl-CoA 100.0 2.4E-39 5.3E-44 317.2 29.6 310 2-347 24-345 (547)
54 PRK05677 long-chain-fatty-acid 100.0 2.5E-39 5.4E-44 318.1 29.0 312 2-347 25-370 (562)
55 PRK05857 acyl-CoA synthetase; 100.0 1.6E-39 3.5E-44 317.9 26.0 306 2-345 15-327 (540)
56 PRK10252 entF enterobactin syn 100.0 1.1E-39 2.3E-44 348.8 26.5 301 2-348 459-762 (1296)
57 PRK06060 acyl-CoA synthetase; 100.0 1.7E-39 3.8E-44 326.9 26.4 294 2-345 5-303 (705)
58 PRK07470 acyl-CoA synthetase; 100.0 3.4E-39 7.4E-44 314.8 27.1 310 1-347 7-324 (528)
59 PRK06188 acyl-CoA synthetase; 100.0 4.8E-39 1.1E-43 313.5 27.7 309 2-347 13-325 (524)
60 PRK08315 AMP-binding domain pr 100.0 1E-38 2.2E-43 313.7 29.2 313 1-348 16-361 (559)
61 PLN02574 4-coumarate--CoA liga 100.0 1E-38 2.2E-43 313.5 29.1 306 3-346 42-363 (560)
62 PRK13388 acyl-CoA synthetase; 100.0 9.6E-39 2.1E-43 312.3 28.7 301 2-346 4-306 (540)
63 PLN02330 4-coumarate--CoA liga 100.0 8.1E-39 1.7E-43 313.4 28.2 307 1-346 28-347 (546)
64 PRK13383 acyl-CoA synthetase; 100.0 9.5E-39 2.1E-43 310.8 28.4 300 1-347 35-336 (516)
65 PRK12467 peptide synthase; Pro 100.0 2E-39 4.3E-44 370.7 26.7 298 2-347 3096-3396(3956)
66 PRK07769 long-chain-fatty-acid 100.0 7.4E-39 1.6E-43 318.7 27.4 308 1-348 21-357 (631)
67 TIGR02262 benz_CoA_lig benzoat 100.0 2E-38 4.4E-43 308.0 29.5 309 4-347 7-322 (508)
68 PRK08633 2-acyl-glycerophospho 100.0 5.7E-39 1.2E-43 339.7 27.5 310 2-347 616-942 (1146)
69 PRK07867 acyl-CoA synthetase; 100.0 1.4E-38 3.1E-43 310.2 28.1 301 2-346 6-308 (529)
70 PRK07798 acyl-CoA synthetase; 100.0 2E-38 4.2E-43 309.6 28.8 311 1-346 3-340 (533)
71 PRK03584 acetoacetyl-CoA synth 100.0 2E-38 4.3E-43 316.9 28.5 307 2-345 87-427 (655)
72 PRK06164 acyl-CoA synthetase; 100.0 2.1E-38 4.5E-43 310.1 28.1 310 1-348 10-339 (540)
73 TIGR03443 alpha_am_amid L-amin 100.0 5.6E-39 1.2E-43 344.9 26.2 306 2-346 237-573 (1389)
74 PRK05620 long-chain-fatty-acid 100.0 2.4E-38 5.1E-43 312.0 28.6 311 1-346 10-341 (576)
75 PRK12583 acyl-CoA synthetase; 100.0 4.6E-38 9.9E-43 308.9 29.4 311 2-347 19-362 (558)
76 PRK06018 putative acyl-CoA syn 100.0 2E-38 4.3E-43 310.4 26.6 310 1-347 10-337 (542)
77 TIGR03205 pimA dicarboxylate-- 100.0 5.3E-38 1.2E-42 307.3 29.4 310 2-347 22-356 (541)
78 PRK08008 caiC putative crotono 100.0 4.5E-38 9.8E-43 306.2 28.6 310 2-347 8-331 (517)
79 PRK10946 entE enterobactin syn 100.0 4.5E-38 9.8E-43 307.4 28.6 307 2-343 26-340 (536)
80 PRK07008 long-chain-fatty-acid 100.0 2.7E-38 5.8E-43 309.3 27.0 308 2-345 11-335 (539)
81 PRK12476 putative fatty-acid-- 100.0 3.2E-38 6.8E-43 313.0 27.3 304 1-346 34-366 (612)
82 PRK07787 acyl-CoA synthetase; 100.0 5.1E-38 1.1E-42 302.3 27.7 275 11-346 10-284 (471)
83 PLN02479 acetate-CoA ligase 100.0 1.3E-37 2.8E-42 306.2 30.6 309 1-345 20-351 (567)
84 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.6E-38 3.4E-43 308.2 23.8 297 2-345 1-301 (502)
85 PRK12492 long-chain-fatty-acid 100.0 6.7E-38 1.4E-42 307.9 28.4 314 1-348 24-378 (562)
86 PRK05851 long-chain-fatty-acid 100.0 2.4E-38 5.2E-43 308.5 24.9 298 1-346 1-321 (525)
87 PRK06710 long-chain-fatty-acid 100.0 4.9E-38 1.1E-42 309.0 27.2 310 2-346 25-366 (563)
88 PRK09088 acyl-CoA synthetase; 100.0 5.6E-38 1.2E-42 303.4 27.1 290 8-345 2-293 (488)
89 PRK12467 peptide synthase; Pro 100.0 3.5E-38 7.7E-43 360.5 28.2 301 2-347 1575-1879(3956)
90 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.2E-37 2.5E-42 310.5 28.4 305 2-344 88-427 (652)
91 PRK08751 putative long-chain f 100.0 9.9E-38 2.2E-42 306.7 27.5 313 2-348 26-374 (560)
92 PRK07059 Long-chain-fatty-acid 100.0 1.5E-37 3.2E-42 305.2 28.7 312 2-348 24-372 (557)
93 PRK08162 acyl-CoA synthetase; 100.0 2.4E-37 5.1E-42 303.0 29.6 310 1-347 18-339 (545)
94 PRK04813 D-alanine--poly(phosp 100.0 7.8E-38 1.7E-42 303.4 25.8 299 1-346 2-304 (503)
95 PRK06178 acyl-CoA synthetase; 100.0 1.6E-37 3.5E-42 305.6 28.4 310 1-345 33-370 (567)
96 PRK05691 peptide synthase; Val 100.0 5.5E-38 1.2E-42 361.6 28.4 300 2-347 3721-4028(4334)
97 PRK12316 peptide synthase; Pro 100.0 5.7E-38 1.2E-42 363.9 28.4 300 2-347 2004-2306(5163)
98 PRK05850 acyl-CoA synthetase; 100.0 1.2E-37 2.6E-42 307.2 26.1 303 1-345 1-336 (578)
99 PRK12316 peptide synthase; Pro 100.0 7.6E-38 1.7E-42 362.9 27.8 301 2-348 4552-4855(5163)
100 PRK06814 acylglycerophosphoeth 100.0 2.3E-37 5.1E-42 326.9 28.5 308 2-347 632-951 (1140)
101 PRK08974 long-chain-fatty-acid 100.0 7.8E-37 1.7E-41 300.3 29.6 313 2-348 24-370 (560)
102 PRK13390 acyl-CoA synthetase; 100.0 1.2E-36 2.6E-41 295.1 26.8 301 8-345 4-312 (501)
103 PRK05691 peptide synthase; Val 100.0 5.1E-37 1.1E-41 353.6 28.2 302 2-347 2189-2493(4334)
104 COG1021 EntE Peptide arylation 100.0 1.4E-37 3E-42 272.8 17.6 306 2-342 29-344 (542)
105 PRK07868 acyl-CoA synthetase; 100.0 2.2E-36 4.7E-41 312.6 27.9 300 1-345 447-761 (994)
106 PRK09029 O-succinylbenzoic aci 100.0 2.8E-36 6E-41 289.3 26.4 280 1-346 2-282 (458)
107 PRK09192 acyl-CoA synthetase; 100.0 3E-36 6.5E-41 297.2 27.2 308 1-347 21-349 (579)
108 PRK08308 acyl-CoA synthetase; 100.0 5.4E-36 1.2E-40 283.7 27.5 252 19-344 1-252 (414)
109 PRK13391 acyl-CoA synthetase; 100.0 4.9E-36 1.1E-40 291.5 27.6 304 8-345 4-317 (511)
110 KOG1180 Acyl-CoA synthetase [L 100.0 2.8E-36 6E-41 274.4 21.5 326 2-347 42-446 (678)
111 PRK12406 long-chain-fatty-acid 100.0 2.9E-35 6.3E-40 285.9 28.8 295 18-347 3-315 (509)
112 PRK07445 O-succinylbenzoic aci 100.0 2.1E-35 4.5E-40 282.3 24.6 253 26-346 19-272 (452)
113 PRK07768 long-chain-fatty-acid 100.0 7.5E-35 1.6E-39 285.4 26.3 303 2-346 3-325 (545)
114 PRK08276 long-chain-fatty-acid 100.0 9.2E-35 2E-39 282.0 26.1 294 18-346 3-305 (502)
115 TIGR01733 AA-adenyl-dom amino 100.0 8.1E-35 1.7E-39 274.8 24.6 273 28-345 1-277 (408)
116 PTZ00297 pantothenate kinase; 100.0 3.4E-34 7.3E-39 297.9 25.5 301 2-341 428-791 (1452)
117 TIGR01923 menE O-succinylbenzo 100.0 5.1E-34 1.1E-38 271.8 23.9 263 28-348 1-263 (436)
118 KOG1175 Acyl-CoA synthetase [L 100.0 5.1E-33 1.1E-37 264.0 21.9 305 14-351 78-408 (626)
119 PLN03051 acyl-activating enzym 100.0 1.3E-32 2.9E-37 266.5 20.2 252 75-343 1-278 (499)
120 COG1020 EntF Non-ribosomal pep 100.0 5.3E-27 1.2E-31 234.3 25.8 296 2-345 228-529 (642)
121 TIGR03089 conserved hypothetic 100.0 3E-27 6.5E-32 204.3 19.0 207 7-271 2-227 (227)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.9 5.8E-22 1.3E-26 184.6 15.9 152 170-347 95-249 (386)
123 PRK07824 O-succinylbenzoic aci 99.8 1.1E-19 2.4E-24 168.8 15.4 157 166-345 31-192 (358)
124 KOG3628 Predicted AMP-binding 99.8 5.3E-17 1.2E-21 158.6 24.1 298 2-327 771-1092(1363)
125 TIGR02155 PA_CoA_ligase phenyl 99.8 3.1E-18 6.8E-23 162.6 13.6 159 168-342 73-234 (422)
126 TIGR03335 F390_ftsA coenzyme F 99.7 7.2E-17 1.6E-21 153.9 13.7 156 168-341 84-242 (445)
127 KOG1178 Non-ribosomal peptide 99.5 2E-14 4.3E-19 144.3 10.5 307 4-345 39-370 (1032)
128 COG1541 PaaK Coenzyme F390 syn 99.4 3.9E-12 8.5E-17 117.0 14.5 157 168-343 88-250 (438)
129 KOG3628 Predicted AMP-binding 99.1 2.3E-10 5E-15 113.0 10.5 290 3-326 96-421 (1363)
130 TIGR02304 aden_form_hyp probab 99.0 2.4E-09 5.1E-14 100.7 12.3 148 172-347 101-255 (430)
131 PF04443 LuxE: Acyl-protein sy 97.9 0.00017 3.7E-09 66.6 12.5 168 168-347 87-276 (365)
132 COG1541 PaaK Coenzyme F390 syn 96.1 0.046 9.9E-07 51.3 9.9 94 25-136 108-203 (438)
133 PF03321 GH3: GH3 auxin-respon 92.6 0.087 1.9E-06 51.6 2.8 32 166-197 76-108 (528)
134 PLN02247 indole-3-acetic acid- 90.3 5.3 0.00012 39.6 12.3 29 169-197 88-117 (606)
135 TIGR03335 F390_ftsA coenzyme F 87.8 5.4 0.00012 38.3 10.5 83 25-127 104-188 (445)
136 TIGR02155 PA_CoA_ligase phenyl 87.6 4.9 0.00011 38.1 10.1 89 25-131 93-183 (422)
137 PLN02620 indole-3-acetic acid- 83.0 20 0.00042 35.8 11.6 30 168-197 99-129 (612)
138 TIGR03089 conserved hypothetic 76.9 18 0.00039 31.1 8.5 52 63-116 173-226 (227)
139 COG0031 CysK Cysteine synthase 76.8 46 0.001 30.0 11.0 58 65-123 59-116 (300)
140 PF00501 AMP-binding: AMP-bind 70.5 19 0.00042 33.6 7.8 88 168-275 8-99 (417)
141 PRK09274 peptide synthase; Pro 70.3 38 0.00082 33.2 10.1 98 168-277 19-121 (552)
142 PRK06187 long-chain-fatty-acid 68.8 42 0.00091 32.4 10.0 85 25-130 185-270 (521)
143 KOG1177 Long chain fatty acid 68.8 34 0.00073 32.9 8.5 114 187-312 75-198 (596)
144 PRK07656 long-chain-fatty-acid 66.9 37 0.0008 32.8 9.1 86 25-131 184-271 (513)
145 PRK06334 long chain fatty acid 66.6 71 0.0015 31.4 11.1 97 14-130 181-288 (539)
146 TIGR03590 PseG pseudaminic aci 66.5 64 0.0014 28.7 9.9 105 18-146 2-112 (279)
147 PF06543 Lac_bphage_repr: Lact 64.2 6.2 0.00014 24.3 1.9 26 306-331 22-47 (49)
148 KOG1176 Acyl-CoA synthetase [L 61.8 33 0.00071 33.8 7.5 88 187-286 43-136 (537)
149 PLN03052 acetate--CoA ligase; 61.6 67 0.0015 33.1 10.1 98 168-278 188-289 (728)
150 PRK08316 acyl-CoA synthetase; 59.7 83 0.0018 30.4 10.1 85 188-284 35-123 (523)
151 PRK08315 AMP-binding domain pr 59.3 70 0.0015 31.3 9.6 82 25-126 217-300 (559)
152 PRK07529 AMP-binding domain pr 58.7 67 0.0015 32.3 9.5 96 168-276 38-136 (632)
153 TIGR02188 Ac_CoA_lig_AcsA acet 58.4 62 0.0013 32.4 9.2 97 167-278 69-169 (625)
154 PF02729 OTCace_N: Aspartate/o 58.1 92 0.002 24.6 11.2 77 64-141 35-120 (142)
155 PLN02556 cysteine synthase/L-3 57.6 1.1E+02 0.0024 28.5 10.0 59 65-123 107-165 (368)
156 PLN03102 acyl-activating enzym 57.5 67 0.0015 31.8 9.2 82 189-282 39-124 (579)
157 TIGR03098 ligase_PEP_1 acyl-Co 57.5 63 0.0014 31.2 8.9 83 189-283 25-111 (515)
158 PRK07788 acyl-CoA synthetase; 57.0 60 0.0013 31.8 8.7 83 189-283 74-160 (549)
159 PTZ00237 acetyl-CoA synthetase 56.1 82 0.0018 31.8 9.6 78 188-277 91-172 (647)
160 PRK08008 caiC putative crotono 55.7 1.2E+02 0.0026 29.3 10.5 82 189-282 37-122 (517)
161 PLN02736 long-chain acyl-CoA s 54.8 82 0.0018 31.8 9.4 84 189-284 78-165 (651)
162 PRK00174 acetyl-CoA synthetase 54.7 88 0.0019 31.4 9.6 97 167-278 79-179 (637)
163 PRK08276 long-chain-fatty-acid 54.7 93 0.002 30.0 9.5 83 189-283 11-97 (502)
164 PLN02654 acetate-CoA ligase 54.5 44 0.00095 33.9 7.4 97 168-279 102-202 (666)
165 PLN02330 4-coumarate--CoA liga 54.2 92 0.002 30.5 9.5 96 168-282 41-140 (546)
166 PRK06839 acyl-CoA synthetase; 54.2 1.4E+02 0.0029 28.7 10.5 84 188-283 26-114 (496)
167 PRK03584 acetoacetyl-CoA synth 53.9 92 0.002 31.4 9.6 94 168-277 97-194 (655)
168 PRK05857 acyl-CoA synthetase; 53.8 90 0.0019 30.6 9.3 93 167-278 26-122 (540)
169 cd01445 TST_Repeats Thiosulfat 53.6 41 0.00089 26.3 5.6 43 37-96 81-126 (138)
170 TIGR01923 menE O-succinylbenzo 53.3 76 0.0017 29.8 8.5 83 25-130 129-212 (436)
171 PRK12583 acyl-CoA synthetase; 52.9 1.1E+02 0.0024 29.9 9.9 81 25-125 219-301 (558)
172 PLN02860 o-succinylbenzoate-Co 52.9 1.4E+02 0.003 29.4 10.5 96 14-130 170-275 (563)
173 PRK05605 long-chain-fatty-acid 52.8 91 0.002 30.7 9.2 83 189-283 57-143 (573)
174 PLN02387 long-chain-fatty-acid 52.8 1.5E+02 0.0032 30.3 10.9 86 188-285 105-194 (696)
175 PRK13295 cyclohexanecarboxylat 52.3 1E+02 0.0023 30.1 9.5 95 168-277 37-135 (547)
176 TIGR01139 cysK cysteine syntha 51.8 1.8E+02 0.0039 26.1 10.7 60 65-125 54-113 (298)
177 PRK05677 long-chain-fatty-acid 51.8 1.4E+02 0.003 29.4 10.3 93 168-281 37-134 (562)
178 PLN03051 acyl-activating enzym 51.4 1.1E+02 0.0023 29.7 9.3 68 63-130 155-223 (499)
179 KOG0025 Zn2+-binding dehydroge 51.0 52 0.0011 29.5 6.1 64 63-126 156-220 (354)
180 PLN02249 indole-3-acetic acid- 51.0 6.3 0.00014 39.2 0.7 30 167-196 97-127 (597)
181 TIGR01217 ac_ac_CoA_syn acetoa 50.9 1.1E+02 0.0025 30.8 9.7 93 169-277 98-194 (652)
182 PRK11761 cysM cysteine synthas 50.9 1.8E+02 0.0039 26.2 10.0 58 65-123 60-117 (296)
183 PRK07798 acyl-CoA synthetase; 50.5 1.7E+02 0.0037 28.2 10.7 83 189-283 28-114 (533)
184 PRK06155 crotonobetaine/carnit 50.2 1.1E+02 0.0023 30.1 9.2 84 189-284 46-133 (542)
185 PRK08279 long-chain-acyl-CoA s 50.0 1.7E+02 0.0036 29.1 10.7 96 167-283 49-148 (600)
186 PF09664 DUF2399: Protein of u 49.9 1.3E+02 0.0029 24.0 8.3 79 234-333 63-141 (152)
187 TIGR01733 AA-adenyl-dom amino 49.1 1.4E+02 0.0031 27.5 9.6 88 25-132 138-228 (408)
188 PLN02246 4-coumarate--CoA liga 49.1 86 0.0019 30.6 8.3 82 189-282 50-135 (537)
189 cd00640 Trp-synth-beta_II Tryp 49.1 1.7E+02 0.0038 25.1 10.5 59 67-126 49-107 (244)
190 PRK07638 acyl-CoA synthetase; 49.0 1.4E+02 0.0031 28.5 9.8 86 25-131 161-247 (487)
191 PF00818 Ice_nucleation: Ice n 48.5 8.8 0.00019 17.8 0.6 10 334-343 1-10 (16)
192 PRK07476 eutB threonine dehydr 48.4 1.8E+02 0.0039 26.5 9.7 53 74-126 72-124 (322)
193 PRK03640 O-succinylbenzoic aci 48.3 1.2E+02 0.0027 28.9 9.2 67 63-130 177-244 (483)
194 PRK13388 acyl-CoA synthetase; 48.3 1.5E+02 0.0033 29.0 9.9 82 189-282 26-112 (540)
195 PRK05850 acyl-CoA synthetase; 47.5 1.7E+02 0.0038 28.8 10.3 84 188-284 34-124 (578)
196 PRK04319 acetyl-CoA synthetase 47.3 1.3E+02 0.0027 29.8 9.3 68 63-130 241-310 (570)
197 PRK13391 acyl-CoA synthetase; 47.2 1.7E+02 0.0038 28.2 10.1 96 168-282 10-109 (511)
198 TIGR03443 alpha_am_amid L-amin 46.9 1.1E+02 0.0024 34.1 9.6 98 167-275 248-348 (1389)
199 PRK06188 acyl-CoA synthetase; 46.5 1.5E+02 0.0034 28.6 9.7 84 25-129 186-269 (524)
200 PRK10696 tRNA 2-thiocytidine b 46.5 2E+02 0.0044 25.2 9.8 59 64-122 25-94 (258)
201 cd01563 Thr-synth_1 Threonine 46.4 1.8E+02 0.004 26.3 9.5 59 68-127 70-128 (324)
202 PRK07514 malonyl-CoA synthase; 46.1 1.3E+02 0.0028 29.0 8.9 84 188-283 27-114 (504)
203 PRK08162 acyl-CoA synthetase; 45.9 1.1E+02 0.0023 30.0 8.4 83 189-283 43-129 (545)
204 PRK06164 acyl-CoA synthetase; 45.8 2.3E+02 0.005 27.5 10.8 96 15-131 180-285 (540)
205 PRK13237 tyrosine phenol-lyase 45.7 2E+02 0.0044 27.7 9.7 48 63-115 112-174 (460)
206 PLN02565 cysteine synthase 45.7 2.4E+02 0.0052 25.7 10.7 61 64-124 61-122 (322)
207 PRK13383 acyl-CoA synthetase; 45.5 1.4E+02 0.003 28.9 9.1 83 189-283 60-146 (516)
208 KOG1250 Threonine/serine dehyd 45.3 1.8E+02 0.0039 27.4 8.8 54 74-127 119-172 (457)
209 PLN02574 4-coumarate--CoA liga 44.9 2.4E+02 0.0052 27.7 10.8 97 168-283 52-153 (560)
210 COG0365 Acs Acyl-coenzyme A sy 44.9 1.2E+02 0.0027 29.8 8.4 96 172-283 26-126 (528)
211 TIGR02316 propion_prpE propion 44.7 95 0.0021 31.2 8.0 95 168-277 65-163 (628)
212 KOG0023 Alcohol dehydrogenase, 44.7 1.4E+02 0.003 27.3 7.9 69 63-134 177-245 (360)
213 PLN02861 long-chain-fatty-acid 44.6 1.5E+02 0.0032 30.1 9.4 83 189-283 77-163 (660)
214 PRK08314 long-chain-fatty-acid 44.6 1.4E+02 0.003 29.1 9.0 84 189-284 35-123 (546)
215 TIGR01136 cysKM cysteine synth 44.5 2.3E+02 0.0051 25.3 10.1 58 66-124 56-113 (299)
216 PRK08751 putative long-chain f 44.5 1.2E+02 0.0025 29.8 8.5 93 168-281 38-135 (560)
217 PTZ00342 acyl-CoA synthetase; 44.4 2.6E+02 0.0056 29.0 11.1 117 168-312 74-208 (746)
218 COG0399 WecE Predicted pyridox 43.9 1.8E+02 0.0039 27.3 8.9 72 63-138 69-150 (374)
219 PF01041 DegT_DnrJ_EryC1: DegT 43.4 82 0.0018 29.2 6.8 55 63-121 60-119 (363)
220 PRK09088 acyl-CoA synthetase; 42.9 1.7E+02 0.0037 28.0 9.3 77 189-277 22-102 (488)
221 PLN02614 long-chain acyl-CoA s 41.7 1.8E+02 0.0039 29.6 9.4 83 189-283 79-165 (666)
222 PRK13390 acyl-CoA synthetase; 41.3 2.6E+02 0.0055 26.9 10.2 77 189-277 24-104 (501)
223 PRK12406 long-chain-fatty-acid 41.3 1.7E+02 0.0037 28.2 9.0 83 189-283 11-97 (509)
224 PRK07059 Long-chain-fatty-acid 40.9 1.7E+02 0.0038 28.6 9.1 82 188-281 47-132 (557)
225 COG0318 CaiC Acyl-CoA syntheta 40.8 3.2E+02 0.0069 26.8 10.9 97 14-128 169-277 (534)
226 PRK08043 bifunctional acyl-[ac 40.6 2.6E+02 0.0057 28.6 10.6 92 14-125 363-465 (718)
227 TIGR02379 ECA_wecE TDP-4-keto- 40.6 93 0.002 29.1 6.7 55 63-121 66-125 (376)
228 PRK07470 acyl-CoA synthetase; 40.2 2.1E+02 0.0045 27.7 9.5 67 64-130 202-269 (528)
229 cd07050 BMC_EutL_repeat2 ethan 39.9 55 0.0012 22.9 3.6 35 63-97 10-44 (87)
230 PRK06060 acyl-CoA synthetase; 39.5 1.8E+02 0.0039 29.7 9.2 81 189-281 30-114 (705)
231 PRK08308 acyl-CoA synthetase; 39.3 2.8E+02 0.006 25.9 9.9 86 25-131 119-206 (414)
232 cd01449 TST_Repeat_2 Thiosulfa 39.1 72 0.0016 23.7 4.8 32 63-94 73-104 (118)
233 PF02350 Epimerase_2: UDP-N-ac 39.0 2.6E+02 0.0057 25.7 9.3 82 30-132 50-140 (346)
234 PLN02479 acetate-CoA ligase 38.7 2.2E+02 0.0047 28.1 9.4 82 189-282 45-130 (567)
235 PLN03013 cysteine synthase 38.3 2.6E+02 0.0055 26.8 9.2 60 65-124 171-230 (429)
236 PRK10524 prpE propionyl-CoA sy 38.2 1.3E+02 0.0028 30.2 7.7 95 168-277 66-164 (629)
237 PF01297 TroA: Periplasmic sol 37.8 1.2E+02 0.0027 26.3 6.7 77 70-146 151-231 (256)
238 PRK12492 long-chain-fatty-acid 37.6 1.6E+02 0.0034 29.0 8.2 80 188-279 48-132 (562)
239 TIGR01279 DPOR_bchN light-inde 37.4 3.6E+02 0.0079 25.5 10.4 63 64-127 270-333 (407)
240 PRK06381 threonine synthase; V 37.4 2.3E+02 0.005 25.6 8.7 55 73-127 67-121 (319)
241 PRK13382 acyl-CoA synthetase; 37.3 2.1E+02 0.0045 28.0 8.9 82 189-282 68-153 (537)
242 PRK06178 acyl-CoA synthetase; 37.2 1.9E+02 0.0042 28.4 8.8 84 189-284 58-145 (567)
243 PRK11706 TDP-4-oxo-6-deoxy-D-g 37.0 1.2E+02 0.0026 28.2 6.9 55 63-121 66-125 (375)
244 PRK08633 2-acyl-glycerophospho 36.9 3.5E+02 0.0076 29.3 11.4 97 13-129 779-886 (1146)
245 PRK02261 methylaspartate mutas 36.8 2E+02 0.0044 22.4 7.8 45 79-123 18-62 (137)
246 PRK11493 sseA 3-mercaptopyruva 36.7 67 0.0014 28.6 4.9 52 26-94 201-257 (281)
247 cd01979 Pchlide_reductase_N Pc 36.6 3.7E+02 0.008 25.3 10.4 63 65-128 273-336 (396)
248 cd06448 L-Ser-dehyd Serine deh 36.2 3.2E+02 0.007 24.8 9.4 60 64-124 47-106 (316)
249 cd01519 RHOD_HSP67B2 Member of 36.1 1.1E+02 0.0024 22.1 5.3 32 63-94 61-92 (106)
250 COG1064 AdhP Zn-dependent alco 35.8 1.5E+02 0.0032 27.3 6.9 57 63-123 162-218 (339)
251 PRK09162 hypoxanthine-guanine 35.7 1.1E+02 0.0023 25.3 5.7 51 24-93 14-64 (181)
252 TIGR01138 cysM cysteine syntha 35.2 3.3E+02 0.0071 24.3 10.4 57 66-123 57-113 (290)
253 TIGR03208 cyc_hxne_CoA_lg cycl 34.4 3.1E+02 0.0068 26.6 9.7 79 188-278 52-134 (538)
254 cd01019 ZnuA Zinc binding prot 34.3 3.2E+02 0.007 24.3 8.9 71 68-138 178-252 (286)
255 PRK06382 threonine dehydratase 34.1 2.4E+02 0.0052 26.7 8.4 55 73-127 77-131 (406)
256 COG2236 Predicted phosphoribos 34.1 64 0.0014 27.0 4.0 35 25-76 5-39 (192)
257 PRK06018 putative acyl-CoA syn 33.7 2.1E+02 0.0045 27.9 8.4 81 189-281 39-123 (542)
258 TIGR02262 benz_CoA_lig benzoat 32.9 2.7E+02 0.0059 26.8 8.9 83 189-283 30-116 (508)
259 PRK07786 long-chain-fatty-acid 32.8 2.6E+02 0.0056 27.3 8.8 81 189-281 42-126 (542)
260 TIGR02275 DHB_AMP_lig 2,3-dihy 32.6 4.6E+02 0.0099 25.4 10.5 95 14-129 181-287 (527)
261 PLN02723 3-mercaptopyruvate su 32.3 98 0.0021 28.2 5.3 54 26-96 238-297 (320)
262 TIGR00936 ahcY adenosylhomocys 32.2 2.3E+02 0.0051 26.8 7.8 57 64-120 28-86 (406)
263 PRK06814 acylglycerophosphoeth 32.0 5.1E+02 0.011 28.2 11.6 96 14-129 791-897 (1140)
264 cd01561 CBS_like CBS_like: Thi 31.8 3.7E+02 0.008 23.9 9.8 58 67-125 52-109 (291)
265 PRK05852 acyl-CoA synthetase; 31.5 4.9E+02 0.011 25.2 10.6 87 25-131 194-283 (534)
266 cd01562 Thr-dehyd Threonine de 31.3 2.8E+02 0.006 24.8 8.1 57 69-126 66-122 (304)
267 TIGR01101 V_ATP_synt_F vacuola 31.3 2.4E+02 0.0051 21.5 7.0 66 66-136 3-81 (115)
268 PRK02842 light-independent pro 30.8 4.8E+02 0.01 24.9 10.6 62 65-126 287-349 (427)
269 PRK10411 DNA-binding transcrip 30.5 2E+02 0.0042 25.0 6.7 88 235-348 92-187 (240)
270 TIGR01734 D-ala-DACP-lig D-ala 30.3 2E+02 0.0042 27.6 7.4 78 189-278 25-106 (502)
271 PRK06087 short chain acyl-CoA 30.3 1.9E+02 0.004 28.3 7.4 75 189-275 49-127 (547)
272 PRK12476 putative fatty-acid-- 30.3 3.2E+02 0.007 27.2 9.1 102 168-283 47-156 (612)
273 PLN02430 long-chain-fatty-acid 30.2 3.5E+02 0.0077 27.4 9.5 81 189-281 76-160 (660)
274 PRK12582 acyl-CoA synthetase; 30.2 2.1E+02 0.0045 28.7 7.8 56 188-245 79-137 (624)
275 COG1167 ARO8 Transcriptional r 30.1 1.3E+02 0.0029 29.0 6.0 59 65-124 176-235 (459)
276 PRK07867 acyl-CoA synthetase; 30.0 3.3E+02 0.0073 26.5 9.1 82 189-282 28-114 (529)
277 PF13580 SIS_2: SIS domain; PD 29.8 1.3E+02 0.0028 23.4 5.0 55 28-98 80-136 (138)
278 PRK08974 long-chain-fatty-acid 29.3 2.6E+02 0.0056 27.4 8.2 79 189-279 48-131 (560)
279 PRK06702 O-acetylhomoserine am 29.2 3.1E+02 0.0068 26.2 8.3 55 65-121 97-153 (432)
280 PRK09029 O-succinylbenzoic aci 29.1 2.5E+02 0.0054 26.6 7.9 76 189-275 28-106 (458)
281 PRK07008 long-chain-fatty-acid 29.1 2E+02 0.0042 28.2 7.3 67 63-129 214-281 (539)
282 TIGR02370 pyl_corrinoid methyl 29.0 3.4E+02 0.0074 22.6 10.8 122 188-323 57-185 (197)
283 PTZ00216 acyl-CoA synthetase; 28.9 3.9E+02 0.0084 27.3 9.6 86 187-284 119-208 (700)
284 PLN00011 cysteine synthase 28.9 4.5E+02 0.0097 23.9 11.4 59 65-124 65-124 (323)
285 PRK10946 entE enterobactin syn 28.9 4.5E+02 0.0098 25.5 9.8 85 25-130 200-287 (536)
286 PRK06710 long-chain-fatty-acid 28.7 2.7E+02 0.0059 27.3 8.2 79 189-279 49-131 (563)
287 PRK05620 long-chain-fatty-acid 28.5 3.6E+02 0.0078 26.6 9.1 84 188-283 37-125 (576)
288 PRK09545 znuA high-affinity zi 28.5 4.4E+02 0.0096 23.8 8.9 69 69-139 203-277 (311)
289 PRK15407 lipopolysaccharide bi 27.9 3.8E+02 0.0083 25.7 8.7 55 64-122 107-166 (438)
290 PRK02261 methylaspartate mutas 27.8 3E+02 0.0064 21.5 9.5 46 222-277 16-62 (137)
291 PF02073 Peptidase_M29: Thermo 27.6 1.7E+02 0.0037 27.7 6.2 50 32-96 3-54 (398)
292 COG1022 FAA1 Long-chain acyl-C 27.4 5.7E+02 0.012 25.9 9.9 98 12-130 187-294 (613)
293 PF00455 DeoRC: DeoR C termina 26.7 2.9E+02 0.0063 22.2 6.6 89 234-348 17-114 (161)
294 COG1167 ARO8 Transcriptional r 26.6 1.2E+02 0.0027 29.1 5.2 59 208-281 176-238 (459)
295 PRK10252 entF enterobactin syn 26.5 2.4E+02 0.0051 31.2 8.0 83 189-282 483-568 (1296)
296 PRK11658 UDP-4-amino-4-deoxy-L 26.3 2.9E+02 0.0063 25.7 7.6 54 63-120 68-126 (379)
297 PRK09192 acyl-CoA synthetase; 26.3 4.1E+02 0.0088 26.2 9.0 85 188-284 48-143 (579)
298 PRK07787 acyl-CoA synthetase; 26.0 2.8E+02 0.0061 26.4 7.6 75 189-277 25-100 (471)
299 TIGR01127 ilvA_1Cterm threonin 25.9 4.8E+02 0.01 24.3 8.9 56 72-127 51-106 (380)
300 cd02067 B12-binding B12 bindin 25.7 2.8E+02 0.0062 20.6 7.4 40 83-122 18-57 (119)
301 cd02069 methionine_synthase_B1 25.6 4.2E+02 0.0091 22.5 9.4 98 209-322 87-186 (213)
302 PF08479 POTRA_2: POTRA domain 25.4 1.1E+02 0.0023 20.9 3.4 28 23-50 27-54 (76)
303 PRK04813 D-alanine--poly(phosp 25.3 3E+02 0.0064 26.3 7.7 76 189-276 27-106 (503)
304 PRK07276 DNA polymerase III su 25.2 5E+02 0.011 23.3 8.4 45 66-115 131-175 (290)
305 TIGR01284 alt_nitrog_alph nitr 24.8 6.4E+02 0.014 24.3 10.1 58 66-123 323-381 (457)
306 TIGR03588 PseC UDP-4-keto-6-de 24.5 3.5E+02 0.0077 25.0 7.8 55 63-120 64-126 (380)
307 TIGR02035 D_Ser_am_lyase D-ser 24.0 4.4E+02 0.0095 25.3 8.2 60 71-130 154-213 (431)
308 PRK08180 feruloyl-CoA synthase 24.0 3.4E+02 0.0074 27.1 8.0 93 168-276 52-153 (614)
309 cd01017 AdcA Metal binding pro 23.9 4.7E+02 0.01 23.2 8.1 72 69-140 171-246 (282)
310 cd06447 D-Ser-dehyd D-Serine d 23.9 4.6E+02 0.01 24.8 8.3 58 71-128 136-193 (404)
311 cd02071 MM_CoA_mut_B12_BD meth 23.9 3.2E+02 0.007 20.6 8.2 42 82-123 17-58 (122)
312 PRK08638 threonine dehydratase 23.8 5.7E+02 0.012 23.4 9.2 56 73-128 79-134 (333)
313 KOG1179 Very long-chain acyl-C 23.8 3E+02 0.0064 27.4 6.9 60 63-123 278-339 (649)
314 cd07559 ALDH_ACDHII_AcoD-like 23.5 6.8E+02 0.015 24.2 10.7 35 211-245 137-172 (480)
315 PF00464 SHMT: Serine hydroxym 23.2 2.2E+02 0.0049 26.9 6.0 73 65-137 107-197 (399)
316 PRK05638 threonine synthase; V 23.0 4.1E+02 0.0089 25.4 8.0 57 73-129 116-172 (442)
317 TIGR01137 cysta_beta cystathio 22.7 6.3E+02 0.014 24.1 9.3 57 66-123 60-116 (454)
318 TIGR03205 pimA dicarboxylate-- 22.4 4.3E+02 0.0093 25.7 8.3 76 189-276 46-125 (541)
319 PRK11070 ssDNA exonuclease Rec 22.4 6.5E+02 0.014 25.2 9.3 98 25-146 48-160 (575)
320 TIGR00649 MG423 conserved hypo 22.4 5.5E+02 0.012 24.3 8.7 58 64-121 315-381 (422)
321 CHL00073 chlN photochlorophyll 22.4 7.2E+02 0.016 24.1 9.4 39 67-106 313-351 (457)
322 PRK06721 threonine synthase; R 22.3 5.6E+02 0.012 23.6 8.5 55 73-127 79-134 (352)
323 PRK07048 serine/threonine dehy 22.2 5.9E+02 0.013 23.0 8.9 53 73-125 76-128 (321)
324 TIGR02618 tyr_phenol_ly tyrosi 21.9 7.3E+02 0.016 24.0 9.8 47 63-114 105-166 (450)
325 PLN02238 hypoxanthine phosphor 21.8 2.4E+02 0.0053 23.4 5.4 21 25-45 10-30 (189)
326 COG0135 TrpF Phosphoribosylant 21.8 4.8E+02 0.01 22.2 7.2 67 69-135 24-96 (208)
327 TIGR01747 diampropi_NH3ly diam 21.8 4.7E+02 0.01 24.5 7.9 59 69-127 94-152 (376)
328 TIGR01203 HGPRTase hypoxanthin 21.3 2.8E+02 0.006 22.4 5.6 19 27-45 3-21 (166)
329 cd00615 Orn_deC_like Ornithine 21.3 3.9E+02 0.0084 23.7 7.1 55 65-122 96-161 (294)
330 PRK08198 threonine dehydratase 21.3 4.9E+02 0.011 24.5 8.1 60 68-128 70-129 (404)
331 COG1648 CysG Siroheme synthase 21.2 5.1E+02 0.011 22.0 9.6 46 68-115 12-57 (210)
332 PRK08246 threonine dehydratase 21.1 6.2E+02 0.013 22.8 9.6 60 67-127 67-126 (310)
333 PRK11809 putA trifunctional tr 20.6 7.2E+02 0.016 27.8 9.8 37 209-245 767-804 (1318)
334 COG4009 Uncharacterized protei 20.4 3E+02 0.0065 19.3 4.5 66 26-119 9-77 (88)
335 PF07722 Peptidase_C26: Peptid 20.4 1.3E+02 0.0028 25.7 3.6 29 87-115 32-60 (217)
336 KOG2531 Sugar (pentulose and h 20.3 96 0.0021 29.7 2.8 38 303-341 442-479 (545)
337 PRK07409 threonine synthase; V 20.1 6.1E+02 0.013 23.3 8.3 56 72-127 81-137 (353)
338 PF00389 2-Hacid_dh: D-isomer 20.0 2.4E+02 0.0051 21.6 4.8 74 237-336 18-91 (133)
No 1
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-45 Score=356.90 Aligned_cols=316 Identities=26% Similarity=0.392 Sum_probs=262.6
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCcc--ccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKS--YSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~--~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~ 78 (359)
+++.+.|.++++.+|+++|+++.+.. +||+||.++++++|..|++ .|+++||+|+|+++|+
T Consensus 11 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-----------------~~v~~gdrVail~~N~ 73 (534)
T COG0318 11 LTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQA-----------------LGVKPGDRVAILLPNS 73 (534)
T ss_pred ccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCC
Confidence 46889999999999999999998777 9999999999999999999 6899999999999999
Q ss_pred HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccC-CCCCCC---Cccc
Q 018211 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIP-PVPNVS---SETT 154 (359)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~ 154 (359)
++++++++||+++|++++|+|+.++.+++.++++.++++.++++.+..+.........+....+.. ...... ....
T Consensus 74 ~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (534)
T COG0318 74 PEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEA 153 (534)
T ss_pred HHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHH
Confidence 999999999999999999999999999999999999999999998865665555443322111111 111110 1111
Q ss_pred ccccchhh--hcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc--cCCCceEEEecCchhhHHHHHHH
Q 018211 155 VFDQSQAE--KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 155 ~~~~~~~~--~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~~~~~~~ 230 (359)
........ .....+++|+++|+|||||||.||||++||++++.+.......++ ++++|++++++|++|.+|+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~ 233 (534)
T COG0318 154 LAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGL 233 (534)
T ss_pred HhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHH
Confidence 11111111 111156899999999999999999999999999999999888888 89999999999999999998877
Q ss_pred HHhhhcCcEEEEcC--CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhc-cceE
Q 018211 231 LAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRL 307 (359)
Q Consensus 231 ~~~l~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~-~l~~ 307 (359)
+.++..|+++++.+ .|+++.++.. +.++++|++.++|+++..++.+..... .+++ ++|.
T Consensus 234 ~~~~~~G~~~v~~~~~~f~~~~~~~~----------i~~~~~t~~~~vPt~~~~ll~~~~~~~--------~~~~~~lr~ 295 (534)
T COG0318 234 LAPLLGGGTLVLLSPEPFDPEEVLWL----------IEKYKVTVLSGVPTFLRELLDNPEKDD--------DDLSSSLRL 295 (534)
T ss_pred HHHHHcCCEEEeCCCCCcCHHHHHHH----------HHHhcceEEecchHHHHHHHhCCccCc--------cccccceEE
Confidence 88899999999998 5999999998 777889999999999999988744222 2344 4999
Q ss_pred EEecCCCCCHHHHHHHHHHhC-CcccccccCCcCccccccccccC
Q 018211 308 MMCGSSALPLPVMQQWETITG-HRLLERYGMTEGCTKGRHCWQST 351 (359)
Q Consensus 308 i~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~TE~g~~~~~~~~~~ 351 (359)
+++||++++++++++|++.|+ .++++.||+||++++++.+..++
T Consensus 296 ~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 340 (534)
T COG0318 296 VLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDD 340 (534)
T ss_pred EEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCch
Confidence 999999999999999999997 57999999999998777766554
No 2
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-45 Score=363.49 Aligned_cols=319 Identities=17% Similarity=0.238 Sum_probs=249.0
Q ss_pred hHHHHHHHcCCCCCCceEEeeC-----CccccHHHHHHHHHHHHHHHhhC-CCCCccccccccccccccCCCC-------
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSN-DLKTTSEKTKNENSAVLAGGCG------- 68 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~-----~~~~Ty~el~~~~~~la~~L~~~-~~~~~~~~~~~~~~~~~gv~~g------- 68 (359)
|+.+.|.++++.+|+++|+++. ++++||+|+.++++++|+.|.+. + +|+++|
T Consensus 62 ~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~---------------~Gv~~g~~~~~~~ 126 (746)
T PTZ00342 62 HIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEG---------------KGIPEKKYNEEQN 126 (746)
T ss_pred hHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhh---------------cCCCcCccccccc
Confidence 6789999999999999999862 36899999999999999999961 0 288888
Q ss_pred ----CeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC--ceec
Q 018211 69 ----ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSL 142 (359)
Q Consensus 69 ----d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~ 142 (359)
|+|+|+++|+++|+++++||+++|++.||+++.++.+++.+++++++++++|++.+..+.+.......+. .++.
T Consensus 127 ~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~ 206 (746)
T PTZ00342 127 NGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLII 206 (746)
T ss_pred cccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEE
Confidence 9999999999999999999999999999999999999999999999999999987776666655444332 2222
Q ss_pred cCCCCCC------------------CCc----------------------------------ccccc-----------cc
Q 018211 143 IPPVPNV------------------SSE----------------------------------TTVFD-----------QS 159 (359)
Q Consensus 143 ~~~~~~~------------------~~~----------------------------------~~~~~-----------~~ 159 (359)
++..... ... ..... ..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 286 (746)
T PTZ00342 207 LDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFD 286 (746)
T ss_pred ECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHH
Confidence 2221100 000 00000 00
Q ss_pred h-------hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh--ccCCCceEEEecCchhhHHHHHHH
Q 018211 160 Q-------AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 160 ~-------~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~~~~~~~ 230 (359)
. ........++|++.|+|||||||.||||++||++++..+....... .....|++++++|++|++++.. .
T Consensus 287 ~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~-~ 365 (746)
T PTZ00342 287 DMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI-A 365 (746)
T ss_pred HHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH-H
Confidence 0 0012234678999999999999999999999999999877654432 2335689999999999999964 6
Q ss_pred HHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh----h---H-----------
Q 018211 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM----D---T----------- 292 (359)
Q Consensus 231 ~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~----~---~----------- 292 (359)
+.+++.|+++++.+. ++..+++. +.++++|+++++|.+++++.+..... + .
T Consensus 366 ~~~l~~G~~i~~~~~-~~~~l~~d----------i~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~ 434 (746)
T PTZ00342 366 YLSFMLGGTINIWSK-DINYFSKD----------IYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRK 434 (746)
T ss_pred HHHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 778999999999875 88899998 88899999999999999998642110 0 0
Q ss_pred ----------------HHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 293 ----------------ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 293 ----------------~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
...+.++..+++||.+++||+++++++.++|...+|++++++||+||+++.++..
T Consensus 435 ~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~ 505 (746)
T PTZ00342 435 SNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQ 505 (746)
T ss_pred HhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeec
Confidence 0112223345899999999999999999999988999999999999998765543
No 3
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=323.50 Aligned_cols=316 Identities=20% Similarity=0.258 Sum_probs=261.4
Q ss_pred hHHHHHHHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
|+.+.|...++.-||+.|+++ .+.++||+|+.+.++++|..|.+ +|+++||+|++..||+.
T Consensus 51 Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-----------------lGL~kGDrVgvwgpN~~ 113 (596)
T KOG1177|consen 51 TIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-----------------LGLKKGDRVGVWGPNSY 113 (596)
T ss_pred cHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-----------------hcCCCCCEEEEecCChH
Confidence 577889999999999999987 45679999999999999999999 79999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc-----HHHHHHHhhhc----CCce----------
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKS----GAKF---------- 140 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~----~~~~---------- 140 (359)
+|+...+||.++|.+.+++||.+..+++++.+++.+++++|..+.+ .+.+.++.++. +..+
T Consensus 114 ~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lth 193 (596)
T KOG1177|consen 114 EWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTH 193 (596)
T ss_pred HHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceE
Confidence 9999999999999999999999999999999999999999987643 33344433321 1110
Q ss_pred eccCC-CCCCCC---cccccccch-------hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccC
Q 018211 141 SLIPP-VPNVSS---ETTVFDQSQ-------AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (359)
Q Consensus 141 ~~~~~-~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~ 209 (359)
.++.+ ...... ..+...... ........|+|++.|.|||||||.|||+.+||-+++++.......+++.
T Consensus 194 vi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~ 273 (596)
T KOG1177|consen 194 VILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYN 273 (596)
T ss_pred EEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcC
Confidence 01111 000000 011110000 0112345679999999999999999999999999999999999999999
Q ss_pred CCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhh
Q 018211 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (359)
Q Consensus 210 ~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 288 (359)
.+++++...|++|.+|...+.++++..|+|++++. .|++.+.+++ |.++++|.++.+|++|..+++.
T Consensus 274 e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqa----------i~~ekcT~l~gtPtM~~Dlln~-- 341 (596)
T KOG1177|consen 274 EKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQA----------ISNEKCTTLYGTPTMFVDLLNI-- 341 (596)
T ss_pred cceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHH----------HHhhceEEEecChHHHHHHhcc--
Confidence 99999999999999998889999999999999965 7999999999 8999999999999999999987
Q ss_pred hhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCC-cccccccCCcCccccccccccCc
Q 018211 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEGCTKGRHCWQSTS 352 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~TE~g~~~~~~~~~~~ 352 (359)
+....++++++|-++.||+++|+++.+.+.+..++ .+...||+||++.+.+....+++
T Consensus 342 ------~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~ 400 (596)
T KOG1177|consen 342 ------PQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDP 400 (596)
T ss_pred ------hhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCC
Confidence 34566789999999999999999999999998775 46678999999987776655543
No 4
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.8e-44 Score=343.95 Aligned_cols=320 Identities=23% Similarity=0.302 Sum_probs=250.1
Q ss_pred hHHHHHHHcCCCCCCceEEee----CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC
Q 018211 2 EVFKAAYKKGSMARDSVAIRA----DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~----~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n 77 (359)
++.+++.++++.+|+..|+.. ..+.+||+|+.+++.++|++|.+ .|+..||+|+|++.|
T Consensus 17 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-----------------lg~~~gdrvai~a~n 79 (613)
T COG1022 17 TLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLS-----------------LGIPAGDRVAIFAAN 79 (613)
T ss_pred cHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEEeCC
Confidence 567889999999999999985 46899999999999999999999 789779999999999
Q ss_pred CHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc-cHHHHHHHhhhcCCceecc---C---CCC---
Q 018211 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-YREVLQNVASKSGAKFSLI---P---PVP--- 147 (359)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~---~---~~~--- 147 (359)
+++|+++.+|++.+|++.||++++.+++++.+++++++++++|++.. ..+.+.......+...... + ...
T Consensus 80 r~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (613)
T COG1022 80 RPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAK 159 (613)
T ss_pred CHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchh
Confidence 99999999999999999999999999999999999999999999874 3444444433221100000 0 000
Q ss_pred -----CCCCc-cc---ccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc-cCCCceEEEe
Q 018211 148 -----NVSSE-TT---VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHC 217 (359)
Q Consensus 148 -----~~~~~-~~---~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~ 217 (359)
..... .. ..............++|+|.|+|||||||.||||++||+|+++++..+...+. ..++|+.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~Lsf 239 (613)
T COG1022 160 ALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSF 239 (613)
T ss_pred hccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEe
Confidence 00000 00 01111112224567899999999999999999999999999999999999997 8899999999
Q ss_pred cCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh----hH-
Q 018211 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM----DT- 292 (359)
Q Consensus 218 ~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~----~~- 292 (359)
+|+.|++.+.+.....++.|.++. ...+++.++++ +++++||.+.++|++|+.+.+..... +.
T Consensus 240 LPlaHi~Er~~~~~~~~~~g~~~~--~~~~~~~~~~d----------l~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~ 307 (613)
T COG1022 240 LPLAHIFERAFEGGLALYGGVTVL--FKEDPRTLLED----------LKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAV 307 (613)
T ss_pred CcHHHHHHHHHHHHHHhhcceEEE--ecCCHHHHHHH----------HHHhCCeEEeechHHHHHHHHHHHHHHHhcchh
Confidence 999999999754444444444444 44489999999 78899999999999999988763211 10
Q ss_pred -----------------------------------HHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccC
Q 018211 293 -----------------------------------ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGM 337 (359)
Q Consensus 293 -----------------------------------~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~ 337 (359)
...+.++...+++|++++||+++++++...++. +|+++.++||+
T Consensus 308 ~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~-lGi~i~eGYGl 386 (613)
T COG1022 308 RRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRS-LGIPILEGYGL 386 (613)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHH-cCCCeEEEecc
Confidence 012223445579999999999999999877776 59999999999
Q ss_pred CcCccccccccccC
Q 018211 338 TEGCTKGRHCWQST 351 (359)
Q Consensus 338 TE~g~~~~~~~~~~ 351 (359)
|||+++++.+++..
T Consensus 387 TEts~~~~v~~~~~ 400 (613)
T COG1022 387 TETSAVVSVNPPDR 400 (613)
T ss_pred cccccceEEccccC
Confidence 99999888875443
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.1e-44 Score=342.32 Aligned_cols=304 Identities=21% Similarity=0.277 Sum_probs=243.9
Q ss_pred HHHcCC-CCCCceEEeeCC-----ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 7 AYKKGS-MARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 7 l~~~a~-~~p~~~ai~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+.++.. ..+++.|+++.+ +++||+||.+.++++|+.|++. .|+ +||+|++++|+.+|
T Consensus 15 ~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~----------------~gv-kGDrV~iymp~~pe 77 (528)
T COG0365 15 LDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDL----------------GGV-KGDRVAIYMPNSPE 77 (528)
T ss_pred hhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHh----------------CCC-CCCEEEEEcCCCHH
Confidence 444433 347899999753 6899999999999999999874 478 99999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHh------hhcCCceeccCCCCCCCCccc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVA------SKSGAKFSLIPPVPNVSSETT 154 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 154 (359)
.++++|||+++|++.+|+.+.++++++.+.+++++++++|++.......+... +.... .+++.... ....+
T Consensus 78 ~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~-~iv~~r~~--~~~~~ 154 (528)
T COG0365 78 AVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS-VVVVPRLG--LWYDE 154 (528)
T ss_pred HHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-eEEecccc--ccHHH
Confidence 99999999999999999999999999999999999999998865543222111 11111 22222111 11111
Q ss_pred cccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHH-HhhccCCCceEEEecCchhhHHHHHHHHH
Q 018211 155 VFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (359)
Q Consensus 155 ~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 232 (359)
.... .........+.+|+++|+|||||||+||||+++|.+++....... ..+...++|++++..++.|..|.++.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~ 234 (528)
T COG0365 155 AVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFS 234 (528)
T ss_pred HhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHH
Confidence 1111 111112336779999999999999999999999997766555444 46778899999999999999999999999
Q ss_pred hhhcCcEEEEcCC--C-ChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEE
Q 018211 233 PLYAGATVEFMPK--F-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (359)
Q Consensus 233 ~l~~G~~i~~~~~--~-~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~ 309 (359)
+|..|+++++.+. + +++.+++. ++++++|.++..|+.++.|.+... .+++++++||.+.
T Consensus 235 pL~~Gat~~~~eg~p~~~~~~~~~~----------ie~~~vt~~~tsPT~~R~l~~~g~--------~~~~dlssLr~~~ 296 (528)
T COG0365 235 PLASGATTVLYDGRPFYSPERLWEA----------LEKYKVTIFGTSPTFLRRLMKLGL--------GEPYDLSSLRVLG 296 (528)
T ss_pred HHhcCCeEEEeCCCCCCCHHHHHHH----------HHHhCCceEeeCHHHHHHHHhcCC--------cccccchhheeee
Confidence 9999999998864 2 38889998 899999999999999999998732 3567899999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 310 CGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 310 ~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
+.|||++++.++++.+.+|++|.+.||+||+|++.....
T Consensus 297 SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~ 335 (528)
T COG0365 297 SAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGR 335 (528)
T ss_pred ccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCC
Confidence 999999999999999999999999999999996555543
No 6
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=8.3e-44 Score=337.91 Aligned_cols=310 Identities=25% Similarity=0.339 Sum_probs=258.0
Q ss_pred cCCCCCCc-eEEeeCC---ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHH
Q 018211 10 KGSMARDS-VAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (359)
Q Consensus 10 ~a~~~p~~-~ai~~~~---~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (359)
.+..++++ +.+++.. +.+||.|+++++.++|..|.+.| .|+++||+|++++||++++.+++
T Consensus 25 ~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~---------------~~i~~gDvV~i~~pNs~~~~~~~ 89 (537)
T KOG1176|consen 25 PAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELG---------------LGIKKGDVVGILAPNTPEFVELA 89 (537)
T ss_pred cccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcC---------------CCCCCCCEEEEEcCCCHHHHHHH
Confidence 33334444 6666644 99999999999999999999843 35899999999999999999999
Q ss_pred HHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCccc-------cccc
Q 018211 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETT-------VFDQ 158 (359)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 158 (359)
+||+..|++..++||.+...++.+.++.++++++|+|.+..+.+.+........++.+..........+ ....
T Consensus 90 la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 169 (537)
T KOG1176|consen 90 LAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDL 169 (537)
T ss_pred HHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhc
Confidence 999999999999999999999999999999999999999999888776665544444433211111111 0000
Q ss_pred chh---hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhh
Q 018211 159 SQA---EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLY 235 (359)
Q Consensus 159 ~~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~ 235 (359)
... ........+|++.|.|||||||.||||++||++++.+.......+.++..|+.++.+|++|..|++..+.+++.
T Consensus 170 ~~~~~~~~~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~ 249 (537)
T KOG1176|consen 170 MPEGLPDGIRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLA 249 (537)
T ss_pred cccCCCcccccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHh
Confidence 000 01344566999999999999999999999999999998887777888889999999999999999876666888
Q ss_pred cCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCC
Q 018211 236 AGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSAL 315 (359)
Q Consensus 236 ~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l 315 (359)
.|+++++.+.|+++.+++. +++|++|++.++|.++..|.+.+ ....++++++|.+.+||+++
T Consensus 250 ~~~~ii~~~~f~~~~~~~~----------i~kykvt~~~~vP~~~~~l~~~p--------~~~~~~l~sl~~v~~gga~~ 311 (537)
T KOG1176|consen 250 GGTTIICLRKFDAELFLDL----------IEKYKVTHLFLVPPVLNMLAKSP--------IVKKYDLSSLRSVLSGGAPL 311 (537)
T ss_pred CCceEEECCCCCHHHHHHH----------HHHhCEEEEEcChHHHHHHhcCC--------ccCcccCCccEEEEecCCCC
Confidence 8888988899999999999 89999999999999999999974 23457899999999999999
Q ss_pred CHHHHHHHHHHhC-CcccccccCCcCccccccccccCc
Q 018211 316 PLPVMQQWETITG-HRLLERYGMTEGCTKGRHCWQSTS 352 (359)
Q Consensus 316 ~~~~~~~~~~~~~-~~v~~~YG~TE~g~~~~~~~~~~~ 352 (359)
++++.+++++.++ ..+.++||+||+|+.++.+...++
T Consensus 312 ~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e 349 (537)
T KOG1176|consen 312 SPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE 349 (537)
T ss_pred CHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc
Confidence 9999999999997 899999999999987777766654
No 7
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.9e-43 Score=352.44 Aligned_cols=317 Identities=23% Similarity=0.272 Sum_probs=251.1
Q ss_pred hHHHHHHHcCCCCCCceEEee----C-----CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 018211 2 EVFKAAYKKGSMARDSVAIRA----D-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~----~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (359)
++.+.+.+.++.+|+++|+.+ + .+.+||+||.++++++|+.|.+ +|+++||+|+
T Consensus 45 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 107 (651)
T PLN02736 45 TLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-----------------HGIPKGACVG 107 (651)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEE
Confidence 678899999999999999942 2 2469999999999999999999 7999999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-ceeccCCCCC--C
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVPN--V 149 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~ 149 (359)
|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.......+. ..+++..... .
T Consensus 108 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~ 187 (651)
T PLN02736 108 LYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPL 187 (651)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhh
Confidence 999999999999999999999999999999999999999999999999998766655554333321 1212111000 0
Q ss_pred ---C--------Ccccccccc--hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEE
Q 018211 150 ---S--------SETTVFDQS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLH 216 (359)
Q Consensus 150 ---~--------~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~ 216 (359)
. ...+..+.. .........++|+++|+|||||||.||||++||++++.++......+++.++|++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~ 267 (651)
T PLN02736 188 PSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHIS 267 (651)
T ss_pred hhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEE
Confidence 0 000000000 001112345789999999999999999999999999999888888888999999999
Q ss_pred ecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhh-----
Q 018211 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD----- 291 (359)
Q Consensus 217 ~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~----- 291 (359)
.+|++|.++++ .++.++..|+++++.+. ++..+++. ++++++|+++++|.+++.+.+.....-
T Consensus 268 ~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~----------i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 335 (651)
T PLN02736 268 YLPLAHIYERV-NQIVMLHYGVAVGFYQG-DNLKLMDD----------LAALRPTIFCSVPRLYNRIYDGITNAVKESGG 335 (651)
T ss_pred eCCHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEecchHHHHHHHHHHHHHHhcccH
Confidence 99999999996 57888999999998875 78888888 888999999999999998876531100
Q ss_pred -----------------------------HHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcc
Q 018211 292 -----------------------------TELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCT 342 (359)
Q Consensus 292 -----------------------------~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~ 342 (359)
..+.+.+....+++|.+++||+++++++.+++.+.+|+++++.||+||+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~ 415 (651)
T PLN02736 336 LKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSC 415 (651)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhch
Confidence 000111111226899999999999999999999889999999999999987
Q ss_pred ccccc
Q 018211 343 KGRHC 347 (359)
Q Consensus 343 ~~~~~ 347 (359)
.++..
T Consensus 416 ~~~~~ 420 (651)
T PLN02736 416 VISGM 420 (651)
T ss_pred heecc
Confidence 66544
No 8
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-43 Score=346.30 Aligned_cols=311 Identities=18% Similarity=0.226 Sum_probs=255.8
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.+.+.++.+|+++|++++++++||+||.++++++|+.|.+ .|+++||+|+++++|++++
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~-----------------~gi~~gd~V~i~~~n~~~~ 112 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLA-----------------LGVRAGDGVAVLARNHRGF 112 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHHH
Confidence 46788999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccC-CCC------CCCCccc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIP-PVP------NVSSETT 154 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~ 154 (359)
+++++||+++|++++|+++.++.+++.+++++++++++|++.+..+.+............+.. ... ......+
T Consensus 113 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (549)
T PRK07788 113 VLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDD 192 (549)
T ss_pred HHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHH
Confidence 999999999999999999999999999999999999999998776666554322221111111 100 0001111
Q ss_pred ccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhh
Q 018211 155 VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPL 234 (359)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l 234 (359)
...... ........+++++++|||||||.||+|.++|.++...+......+++..+|+++...|++|..++. .++.++
T Consensus 193 ~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l 270 (549)
T PRK07788 193 LIAGSS-TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWA-HLTLAM 270 (549)
T ss_pred HhcCCC-CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHH-HHHHHH
Confidence 111001 111122356789999999999999999999999999888888888889999999999999999985 477789
Q ss_pred hcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCC
Q 018211 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (359)
Q Consensus 235 ~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~ 314 (359)
..|+++++...+++..+++. ++++++|++.++|+++..+++..... ....++++||.+++||++
T Consensus 271 ~~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~gG~~ 334 (549)
T PRK07788 271 ALGSTVVLRRRFDPEATLED----------IAKHKATALVVVPVMLSRILDLGPEV------LAKYDTSSLKIIFVSGSA 334 (549)
T ss_pred HhCCEEEECCCCCHHHHHHH----------HHHhCCcEEEEHHHHHHHHHhCcccc------cCCCCCCceeEEEEeCCC
Confidence 99999999998999999998 88899999999999999998753210 122457899999999999
Q ss_pred CCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 315 LPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 315 l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++++.++|.+.+|.++++.||+||++.++...
T Consensus 335 l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~ 367 (549)
T PRK07788 335 LSPELATRALEAFGPVLYNLYGSTEVAFATIAT 367 (549)
T ss_pred CCHHHHHHHHHHhCccceeccCcchhchhhccC
Confidence 999999999999999999999999998765543
No 9
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.1e-43 Score=350.83 Aligned_cols=315 Identities=23% Similarity=0.289 Sum_probs=239.9
Q ss_pred hHHHHHHHcCCCCCCceEEee----C-----CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 018211 2 EVFKAAYKKGSMARDSVAIRA----D-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~----~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (359)
|+.+.|.+.++.+|+++|+.. + .+++||+||.++++++|+.|.+ +|+++||+|+
T Consensus 44 t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 106 (660)
T PLN02861 44 SPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-----------------RGVNPGDRCG 106 (660)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 578899999999999999963 1 1479999999999999999999 7999999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC--Cc-eeccCCCCCC
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AK-FSLIPPVPNV 149 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 149 (359)
|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+..+.+........ .. ++.+......
T Consensus 107 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 186 (660)
T PLN02861 107 IYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSE 186 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChh
Confidence 99999999999999999999999999999999999999999999999998766554444332221 11 1111111000
Q ss_pred ------------CCcccccccc-hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc-----cCCC
Q 018211 150 ------------SSETTVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-----YTSA 211 (359)
Q Consensus 150 ------------~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-----~~~~ 211 (359)
.......... .........++|+++|+|||||||.||||++||.+++..+......++ +.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~ 266 (660)
T PLN02861 187 QKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEE 266 (660)
T ss_pred hhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCC
Confidence 0000000000 001122345789999999999999999999999999988776655443 4678
Q ss_pred ceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh-
Q 018211 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM- 290 (359)
Q Consensus 212 d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~- 290 (359)
|++++.+|++|.+++.. .+.+++.|+++++.+ +++..+++. ++++++|+++++|++++.++......
T Consensus 267 d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~~ 334 (660)
T PLN02861 267 DSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMED----------VQALKPTIFCGVPRVYDRIYTGIMQKI 334 (660)
T ss_pred CEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCcEEeechHHHHHHHHHHHHHH
Confidence 99999999999999865 455799999998874 588889988 88899999999999999887531100
Q ss_pred ------------------------------------hHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCC-cccc
Q 018211 291 ------------------------------------DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLE 333 (359)
Q Consensus 291 ------------------------------------~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~ 333 (359)
.....+.++...+++|.+++||+++++++. +|.+.++. ++++
T Consensus 335 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~ 413 (660)
T PLN02861 335 SSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQ 413 (660)
T ss_pred hccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeE
Confidence 000011111222689999999999999985 56666764 7999
Q ss_pred cccCCcCcccccc
Q 018211 334 RYGMTEGCTKGRH 346 (359)
Q Consensus 334 ~YG~TE~g~~~~~ 346 (359)
.||+||+++.++.
T Consensus 414 ~YG~TE~~~~~~~ 426 (660)
T PLN02861 414 GYGLTESCGGCFT 426 (660)
T ss_pred ecchhhhhhceee
Confidence 9999999875544
No 10
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.1e-43 Score=349.89 Aligned_cols=315 Identities=20% Similarity=0.259 Sum_probs=238.9
Q ss_pred hHHHHHHHcCCCCCCceEEeeC----C-----ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD----Q-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~----~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (359)
|+.+.|.+.++.+|+++|+.+. + +++||+||.++++++|+.|.+ +|+++||+|+
T Consensus 46 t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~Gd~Va 108 (666)
T PLN02614 46 SCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-----------------VGVKDEAKCG 108 (666)
T ss_pred cHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 6889999999999999999731 1 358999999999999999999 7999999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC--Cc-eeccCCCCC-
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AK-FSLIPPVPN- 148 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~- 148 (359)
|+++|+++|+++++||+++|+++||+++.++.+++.+++++++++++|++.+....+........ .. ++.+.....
T Consensus 109 i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~ 188 (666)
T PLN02614 109 IYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSRE 188 (666)
T ss_pred EEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChH
Confidence 99999999999999999999999999999999999999999999999998765443322211110 11 111211000
Q ss_pred -----------CCCcccccccch--hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh-----ccCC
Q 018211 149 -----------VSSETTVFDQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-----EYTS 210 (359)
Q Consensus 149 -----------~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~ 210 (359)
............ ........++|+++|+|||||||.||||++||++++..+......+ ++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 268 (666)
T PLN02614 189 QKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTV 268 (666)
T ss_pred HhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCC
Confidence 000000000000 0111234578999999999999999999999999998877655443 4678
Q ss_pred CceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh
Q 018211 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (359)
Q Consensus 211 ~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 290 (359)
+|++++++|++|.+++.. ....+..|+++++.+ +++..+++. +++++||+++++|++++.++......
T Consensus 269 ~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~ 336 (666)
T PLN02614 269 KDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-GDVKLLIED----------LGELKPTIFCAVPRVLDRVYSGLQKK 336 (666)
T ss_pred CcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCeEEEecHHHHHHHHHHHHHH
Confidence 999999999999999864 566788999998875 588899998 88899999999999999987643210
Q ss_pred h-------------------------------------HHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHh-CCccc
Q 018211 291 D-------------------------------------TELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLL 332 (359)
Q Consensus 291 ~-------------------------------------~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~ 332 (359)
- ....+......++||.+++||+++++.+ ++|.+.+ +++++
T Consensus 337 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~ 415 (666)
T PLN02614 337 LSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVL 415 (666)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEE
Confidence 0 0000111112378999999999999875 6676667 59999
Q ss_pred ccccCCcCcccccc
Q 018211 333 ERYGMTEGCTKGRH 346 (359)
Q Consensus 333 ~~YG~TE~g~~~~~ 346 (359)
+.||+||+++.++.
T Consensus 416 ~~YG~TE~~~~~~~ 429 (666)
T PLN02614 416 QGYGLTESCAGTFV 429 (666)
T ss_pred eeCchHhhhhheee
Confidence 99999999875544
No 11
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.3e-42 Score=341.40 Aligned_cols=311 Identities=22% Similarity=0.318 Sum_probs=252.5
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
|+.+.|.+.++.+|+++|++++++.+||+||.++++++|+.|.+ +|+++||+|+++++|++++
T Consensus 8 ~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-----------------~Gv~~gd~V~v~~~n~~~~ 70 (563)
T PLN02860 8 HICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLR-----------------LGLRNGDVVAIAALNSDLY 70 (563)
T ss_pred HHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHHH
Confidence 67899999999999999999988999999999999999999999 7999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhh-hcCC-ceeccCCCCC---------CC
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS-KSGA-KFSLIPPVPN---------VS 150 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~---------~~ 150 (359)
+++++||+++|++++|+++.++.+++.++++++++++++++.+.......... ..+. ...++..... ..
T Consensus 71 ~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (563)
T PLN02860 71 LEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFL 150 (563)
T ss_pred HHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhcc
Confidence 99999999999999999999999999999999999999998765333322211 1111 1111111000 00
Q ss_pred Cccccccc--chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHH
Q 018211 151 SETTVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (359)
Q Consensus 151 ~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 228 (359)
........ ..........++++++|+|||||||.||||.++|.+++.+.......+++.++|+++...|++|..++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~- 229 (563)
T PLN02860 151 TTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 229 (563)
T ss_pred ccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHH-
Confidence 00000000 000111123568999999999999999999999999998877777778899999999999999999985
Q ss_pred HHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEE
Q 018211 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (359)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i 308 (359)
.++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+++.... ......+++||.+
T Consensus 230 ~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~~ 293 (563)
T PLN02860 230 SALAMLMVGACHVLLPKFDAKAALQA----------IKQHNVTSMITVPAMMADLISLTRK------SMTWKVFPSVRKI 293 (563)
T ss_pred HHHHHHHcCceEEecCCCCHHHHHHH----------HHHhCCeeEEeChHHHHHHHHhhhh------hhccccccceeEE
Confidence 57889999999999999999999998 8899999999999999999875211 1112457899999
Q ss_pred EecCCCCCHHHHHHHHHHh-CCcccccccCCcCcccccc
Q 018211 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 309 ~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
++||+++++++.++|.+.| |.++++.||+||+++.++.
T Consensus 294 ~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~ 332 (563)
T PLN02860 294 LNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTF 332 (563)
T ss_pred EeCCCcCCHHHHHHHHHhcCCCceecCCCccccCccccc
Confidence 9999999999999999988 7999999999999876543
No 12
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=9.1e-43 Score=340.38 Aligned_cols=308 Identities=20% Similarity=0.219 Sum_probs=250.4
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC-ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
++.+.|.+.++.+|+++|+.+.+ .++||+||.++++++|+.|.+ .+||+|+++++|+++
T Consensus 20 ~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~--------------------~~gd~Val~~~n~~e 79 (539)
T PRK06334 20 TVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK--------------------YPDQHIGIMMPASAG 79 (539)
T ss_pred cHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh--------------------ccCCeEEEEcCCchH
Confidence 57888999999999999998765 799999999999999999976 379999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhh---cCCceeccCCCCCCCCccccc-
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK---SGAKFSLIPPVPNVSSETTVF- 156 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~- 156 (359)
+++++|||+++|++++|+++.++.+++.++++++++++++++.+..+.+.+.... .+...+.+.............
T Consensus 80 ~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 159 (539)
T PRK06334 80 AYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCR 159 (539)
T ss_pred HHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhh
Confidence 9999999999999999999999999999999999999999998766555443221 111122211100000000000
Q ss_pred -----ccchh-----hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHH
Q 018211 157 -----DQSQA-----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (359)
Q Consensus 157 -----~~~~~-----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 226 (359)
..... .......++++++|+|||||||.||||.+||+++..+.......++.+++|++++.+|++|.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 239 (539)
T PRK06334 160 IGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGF 239 (539)
T ss_pred hhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhh
Confidence 00000 01123467899999999999999999999999999888877778888999999999999999998
Q ss_pred HHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccc
Q 018211 227 FNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (359)
Q Consensus 227 ~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l 305 (359)
...++.++..|+++++.. .+++..+++. ++++++|++.++|++++.+++... ....++++|
T Consensus 240 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l 301 (539)
T PRK06334 240 NSCTLFPLLSGVPVVFAYNPLYPKKIVEM----------IDEAKVTFLGSTPVFFDYILKTAK--------KQESCLPSL 301 (539)
T ss_pred HHHHHHHHHcCCeEEEecCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHHhhh--------hcccccccc
Confidence 767788999999999876 4789999998 888999999999999999987521 223467899
Q ss_pred eEEEecCCCCCHHHHHHHHHHh-CCcccccccCCcCccccccc
Q 018211 306 RLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 306 ~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~~ 347 (359)
|.+++||+++++++.+++.+.+ ++++++.||+||++++++..
T Consensus 302 r~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~ 344 (539)
T PRK06334 302 RFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITIN 344 (539)
T ss_pred cEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEec
Confidence 9999999999999999999988 78999999999998766544
No 13
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-42 Score=337.11 Aligned_cols=312 Identities=24% Similarity=0.335 Sum_probs=259.4
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccc-cCCCCCeEEEEcCCCH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVL-AGGCGARIGIVAKPSF 79 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~-gv~~gd~V~i~~~n~~ 79 (359)
+++.+.|.+.++.+|+++|+.+.++++||+||.+++.++|..|.+ . |+++||+|+++++|++
T Consensus 10 ~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~-----------------~~g~~~g~~V~i~~~~~~ 72 (546)
T PRK08314 10 TSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQ-----------------ECGVRKGDRVLLYMQNSP 72 (546)
T ss_pred CCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHH-----------------hhCCCCCCEEEEECCCCh
Confidence 468899999999999999999999999999999999999999998 6 9999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCC---------C
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV---------S 150 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 150 (359)
+++++++||+++|++++|+++.++.+++.++++.+++++++++.+..+.+............++...... .
T Consensus 73 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (546)
T PRK08314 73 QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVP 152 (546)
T ss_pred HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcc
Confidence 9999999999999999999999999999999999999999999887766655433322111111100000 0
Q ss_pred ------------------CcccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCc
Q 018211 151 ------------------SETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSAD 212 (359)
Q Consensus 151 ------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d 212 (359)
...+..............++++++|+|||||||.||+|.++|.+++.++......+++..+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d 232 (546)
T PRK08314 153 AWLRAEPPLQALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPES 232 (546)
T ss_pred cccccccccccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCc
Confidence 00000000001112234568999999999999999999999999999988888888889999
Q ss_pred eEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhH
Q 018211 213 QFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT 292 (359)
Q Consensus 213 ~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 292 (359)
++++.+|++|..++...++.++..|+++++.+.+++..+++. ++++++|++.++|.++..++....
T Consensus 233 ~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~ll~~~~---- 298 (546)
T PRK08314 233 VVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARL----------IERYRVTHWTNIPTMVVDFLASPG---- 298 (546)
T ss_pred eEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHH----------HHHhcCceecccHHHHHHHHhCCC----
Confidence 999999999999998888899999999999999999999988 888999999999999998876522
Q ss_pred HHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 293 ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 293 ~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
....+++++|.+++||+++++++.++|.+.+|.++++.||+||++..+...
T Consensus 299 ----~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 349 (546)
T PRK08314 299 ----LAERDLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSN 349 (546)
T ss_pred ----ccccCchhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecC
Confidence 122456789999999999999999999999999999999999998765543
No 14
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1e-41 Score=334.02 Aligned_cols=312 Identities=20% Similarity=0.294 Sum_probs=255.4
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC------ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~ 75 (359)
++.+.|.+.++.+|+++|+++.+ +.+||.||.++++++|..|.+ .|+++||+|++++
T Consensus 25 ~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~Val~~ 87 (547)
T PRK13295 25 TINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-----------------LGVGRGDVVSCQL 87 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEC
Confidence 67889999999999999999865 899999999999999999999 6999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc-----HHHHHHHhhhcCC-ceeccCCCCCC
Q 018211 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA-KFSLIPPVPNV 149 (359)
Q Consensus 76 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~ 149 (359)
+|++++++++||++++|++++|+++.++.+++.+++++++++++++++.+ .+.+.++...... ...+.......
T Consensus 88 ~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (547)
T PRK13295 88 PNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGA 167 (547)
T ss_pred CCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCc
Confidence 99999999999999999999999999999999999999999999998754 2223333222211 11111111111
Q ss_pred CCccccc---------ccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCc
Q 018211 150 SSETTVF---------DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPL 220 (359)
Q Consensus 150 ~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl 220 (359)
....... ............++++++|+|||||||.||+|.++|.+++.++......+++.++|++++..|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~ 247 (547)
T PRK13295 168 DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPM 247 (547)
T ss_pred cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCc
Confidence 1110100 0000001122456899999999999999999999999999988888888889999999999999
Q ss_pred hhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHh
Q 018211 221 HHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASAS 300 (359)
Q Consensus 221 ~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 300 (359)
+|..+++..++.++..|+++++.+.+++..+++. ++++++|++.++|.++..+..... ....
T Consensus 248 ~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~--------~~~~ 309 (547)
T PRK13295 248 AHQTGFMYGLMMPVMLGATAVLQDIWDPARAAEL----------IRTEGVTFTMASTPFLTDLTRAVK--------ESGR 309 (547)
T ss_pred hhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHH----------HHHcCCcEEEecHHHHHHHHhccc--------ccCC
Confidence 9999988889999999999999999999999999 888999999999999999887532 1224
Q ss_pred hhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 301 AAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 301 ~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
++++||.+++||+++++++.+++.+.++.++++.||+||++.+.+.++
T Consensus 310 ~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~ 357 (547)
T PRK13295 310 PVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKL 357 (547)
T ss_pred CcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccC
Confidence 578899999999999999999999999999999999999988765544
No 15
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=8.3e-42 Score=338.65 Aligned_cols=314 Identities=19% Similarity=0.267 Sum_probs=243.5
Q ss_pred hHHHHHHHcCCCCCCceEEeeC-----CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
++.+.|.++++.+|+++|+++. ++.+||+||.++++++|+.|.+ +|+++||+|+++++
T Consensus 40 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-----------------~Gv~~gd~Vai~~~ 102 (614)
T PRK08180 40 RLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-----------------RGLSAERPLMILSG 102 (614)
T ss_pred cHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEecC
Confidence 6788999999999999999864 2689999999999999999999 69999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeeeecCCCCC-----HHHHHHHHhhCCceEEEeccc--cHHHHHHHhhhcCCceeccCCCCC-
Q 018211 77 PSFEFVAGVLGTWFSGCIAVPLALSYP-----ESELLHVMHDSDISMVLSTED--YREVLQNVASKSGAKFSLIPPVPN- 148 (359)
Q Consensus 77 n~~~~~~~~lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~- 148 (359)
|+++|++++|||+++|++++|+++.++ .+++.+++++++++++|++.. ....+..... .....+.......
T Consensus 103 n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 181 (614)
T PRK08180 103 NSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP-ADVEVVAVRGAVPG 181 (614)
T ss_pred CCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc-CCceEEEecCCCCC
Confidence 999999999999999999999999998 789999999999999999753 2222222111 1111221111000
Q ss_pred --CCCcccccccch----hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccC--CCceEEEecCc
Q 018211 149 --VSSETTVFDQSQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT--SADQFLHCLPL 220 (359)
Q Consensus 149 --~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl 220 (359)
............ ........++|+++|+|||||||.||||++||+++..+.......++.. .++++++++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl 261 (614)
T PRK08180 182 RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPW 261 (614)
T ss_pred cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecch
Confidence 001111111100 0111234568999999999999999999999999999888777766654 56899999999
Q ss_pred hhhHHHHHHHHHhhhcCcEEEEcC-CCChh---HHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHH
Q 018211 221 HHVHGLFNALLAPLYAGATVEFMP-KFSVR---GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (359)
Q Consensus 221 ~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~---~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~ 296 (359)
+|.+++...++.+++.|+++++.+ .+++. .+++. ++++++|+++++|.++..+++..... ..
T Consensus 262 ~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~----------i~~~~~t~~~~vP~~~~~l~~~~~~~----~~ 327 (614)
T PRK08180 262 NHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRN----------LREISPTVYFNVPKGWEMLVPALERD----AA 327 (614)
T ss_pred HHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHH----------HHHhCCcEEechHHHHHHHHHHHHhc----hh
Confidence 999998777888999999999976 35554 44555 78899999999999999998753211 12
Q ss_pred HHHhhhccceEEEecCCCCCHHHHHHHHHH----hC--CcccccccCCcCccccccc
Q 018211 297 ASASAAKQLRLMMCGSSALPLPVMQQWETI----TG--HRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 297 ~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~----~~--~~v~~~YG~TE~g~~~~~~ 347 (359)
..+.++++||.+++||+++++++.++|.+. +| +++++.||+||++++++..
T Consensus 328 ~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~ 384 (614)
T PRK08180 328 LRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFT 384 (614)
T ss_pred hhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEec
Confidence 234568899999999999999999999875 33 7899999999998766543
No 16
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.5e-41 Score=337.67 Aligned_cols=310 Identities=18% Similarity=0.188 Sum_probs=242.9
Q ss_pred HHHHHHcCCCCCCceEEee------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC
Q 018211 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (359)
Q Consensus 4 ~~~l~~~a~~~p~~~ai~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n 77 (359)
.+.|.++++.+|+++|+++ .++++||+||.++++++|..|.+ +|+++||+|+++++|
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~Gd~V~i~~~n 117 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-----------------LGVGRGDRVLIYMPM 117 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCC
Confidence 3567777888999999987 23689999999999999999999 799999999999999
Q ss_pred CHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc---------HHHHHHHhhhc---CCceeccCC
Q 018211 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (359)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (359)
+++++++++||+++|++++|+++.++.+++.+++++++++++|++... .+.+....... ...++.+..
T Consensus 118 ~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 197 (628)
T TIGR02316 118 IAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDR 197 (628)
T ss_pred CHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999997532 22222221111 122222221
Q ss_pred CCCC--------CCcccccccch--hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHH-HHHHHHHhhccCCCceE
Q 018211 146 VPNV--------SSETTVFDQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSADQF 214 (359)
Q Consensus 146 ~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~ 214 (359)
.... ....+...... ........++++++|+|||||||.||||+++|.+++. ........+++.++|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~ 277 (628)
T TIGR02316 198 GLAPMRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVM 277 (628)
T ss_pred CCCCcCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEE
Confidence 1000 00000000000 0011123568999999999999999999999999764 34445566788899999
Q ss_pred EEecCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh
Q 018211 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (359)
Q Consensus 215 l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 290 (359)
++..|++|..++...++.+|..|+++++.+. +++..+++. ++++++|+++.+|++++.+.+....
T Consensus 278 ~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~- 346 (628)
T TIGR02316 278 FSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSI----------VERYGVRTMFSAPTAIRVLKKQDAA- 346 (628)
T ss_pred EEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCc-
Confidence 9999999999987778999999999999873 467888888 8899999999999999988765211
Q ss_pred hHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 291 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
.....++++||.+++||+++++++.+++++.+|.++++.||+||+|..++.
T Consensus 347 -----~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~ 397 (628)
T TIGR02316 347 -----WLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLA 397 (628)
T ss_pred -----ccccCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeec
Confidence 123356889999999999999999999999899999999999999865443
No 17
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-41 Score=338.49 Aligned_cols=310 Identities=23% Similarity=0.320 Sum_probs=247.8
Q ss_pred hHHHHHHHcCCCCCCceEEee--------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEE
Q 018211 2 EVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGI 73 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~--------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i 73 (359)
++.+.|.+.++.+|+++|+++ ..+++||+||.+++.++|+.|.+ +|+++||+|++
T Consensus 26 t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-----------------~Gi~~gd~V~i 88 (632)
T PRK07529 26 STYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-----------------LGVGPGDVVAF 88 (632)
T ss_pred CHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEE
Confidence 678999999999999999986 34799999999999999999999 79999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc-----HHHHHHHhhhcCC-ce-eccCCC
Q 018211 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA-KF-SLIPPV 146 (359)
Q Consensus 74 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~-~~-~~~~~~ 146 (359)
+++|++++++++|||+++| +++|+++.++.+++.+++++++++++|++... .+.+.......+. +. +.++..
T Consensus 89 ~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 167 (632)
T PRK07529 89 LLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLA 167 (632)
T ss_pred ECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCc
Confidence 9999999999999999999 56999999999999999999999999997643 2223222222211 11 111111
Q ss_pred CCCC-------------------Ccccccccchh---hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH
Q 018211 147 PNVS-------------------SETTVFDQSQA---EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE 204 (359)
Q Consensus 147 ~~~~-------------------~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~ 204 (359)
.... ........... .......++++++|+|||||||.||+|.+||++++.+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~ 247 (632)
T PRK07529 168 RYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL 247 (632)
T ss_pred ccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH
Confidence 1000 00000000000 0112235689999999999999999999999999998877777
Q ss_pred hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC--CC----hhHHHHHHHhhcCCCCCCCCCcceeeecchH
Q 018211 205 AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK--FS----VRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (359)
Q Consensus 205 ~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~--~~----~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (359)
.+++.++|++++.+|++|..+.+..++.++..|+++++.+. +. ...+++. ++++++|++.++|+
T Consensus 248 ~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~ 317 (632)
T PRK07529 248 LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKI----------VERYRINFLSGVPT 317 (632)
T ss_pred hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHH----------HHHhCCeEEEeHHH
Confidence 88889999999999999999998888999999999999863 22 2456676 88899999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 279 MYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 279 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
++..+.+... ...++++||.+++||+++++++.++|++.+|+++++.||+||++.+++.++
T Consensus 318 ~~~~l~~~~~---------~~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~ 378 (632)
T PRK07529 318 VYAALLQVPV---------DGHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNP 378 (632)
T ss_pred HHHHHHhCcc---------cCCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCC
Confidence 9999987521 123678999999999999999999999999999999999999987765544
No 18
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.1e-41 Score=340.09 Aligned_cols=312 Identities=17% Similarity=0.227 Sum_probs=242.3
Q ss_pred hHH-HHHHHcCC-CCCCceEEeeC------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEE
Q 018211 2 EVF-KAAYKKGS-MARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGI 73 (359)
Q Consensus 2 ~i~-~~l~~~a~-~~p~~~ai~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i 73 (359)
|+. +.|.++++ .+|+++|+++. .+++||+||.++++++|+.|++ +|+++||+|++
T Consensus 88 N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrV~i 150 (666)
T PLN02654 88 NICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-----------------VGVKKGDAVVI 150 (666)
T ss_pred eHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEE
Confidence 443 44555554 58999999873 3689999999999999999999 79999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH---------HHHHHhhhcC---C--c
Q 018211 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE---------VLQNVASKSG---A--K 139 (359)
Q Consensus 74 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~---~--~ 139 (359)
+++|++++++++|||+++|++++|+++.++.+++..++++++++++|++..... .+........ . .
T Consensus 151 ~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 230 (666)
T PLN02654 151 YLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVG 230 (666)
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCcc
Confidence 999999999999999999999999999999999999999999999999865321 1211111100 0 0
Q ss_pred -eeccCCCCCC-------CC-----cccccccch-hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHH-HHHHHHH
Q 018211 140 -FSLIPPVPNV-------SS-----ETTVFDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTE 204 (359)
Q Consensus 140 -~~~~~~~~~~-------~~-----~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~ 204 (359)
.......... .. ..+...... ........++|+++|+|||||||.||||+++|.+++. .......
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~ 310 (666)
T PLN02654 231 ICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKY 310 (666)
T ss_pred EEEEecccccccccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHH
Confidence 0010100000 00 000000000 0011124578999999999999999999999999864 4455566
Q ss_pred hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHH
Q 018211 205 AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (359)
Q Consensus 205 ~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~ 280 (359)
.++++++|++++..|++|.+++.+.++.+|+.|+++++.+. +++..+++. ++++++|++..+|+++
T Consensus 311 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~ 380 (666)
T PLN02654 311 AFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDI----------VDKYKVTIFYTAPTLV 380 (666)
T ss_pred hcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHH
Confidence 78899999999999999999987778899999999999874 578889998 8899999999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC---CcccccccCCcCcccccc
Q 018211 281 TRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 281 ~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~---~~v~~~YG~TE~g~~~~~ 346 (359)
+.+.+.... .....++++||.++++|+++++++.+++.+.+| +++.+.||+||+|+....
T Consensus 381 ~~l~~~~~~------~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~ 443 (666)
T PLN02654 381 RSLMRDGDE------YVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMIT 443 (666)
T ss_pred HHHHhhCcc------ccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeec
Confidence 999875321 122356789999999999999999999999997 789999999999976543
No 19
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-41 Score=331.84 Aligned_cols=311 Identities=15% Similarity=0.203 Sum_probs=253.8
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.+.++.+|+++|+.+.++++||+||.++++++|+.|.+ +|+++|++|+++++|++++
T Consensus 44 ~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~-----------------~g~~~g~~V~i~~~n~~~~ 106 (537)
T PRK13382 44 GPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQA-----------------LPIGEPRVVGIMCRNHRGF 106 (537)
T ss_pred CHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEecCcHHH
Confidence 57788999999999999999988999999999999999999998 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-c-eeccCCCCCCCCcccccccc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-K-FSLIPPVPNVSSETTVFDQS 159 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 159 (359)
+++++|++++|++++|+++.++.+++.+++++++++++|++.+....+......... . ...+................
T Consensus 107 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (537)
T PRK13382 107 VEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAH 186 (537)
T ss_pred HHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhcc
Confidence 999999999999999999999999999999999999999998766555443221111 1 11111100000000010000
Q ss_pred hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcE
Q 018211 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~ 239 (359)
. .......+++.++++|||||||.||||.++|.+++.........+....+|+++...|++|..++. .++.++..|++
T Consensus 187 ~-~~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~g~~ 264 (537)
T PRK13382 187 A-GQRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFS-QLVLAASLACT 264 (537)
T ss_pred C-cCCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHH-HHHHHHhcCcE
Confidence 0 011122457889999999999999999999999988888777778888999999999999999984 68888999999
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++.+.++++.+++. ++++++|++.++|++++.+++.... .....+++++|.+++||+++++++
T Consensus 265 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~i~~gG~~l~~~~ 328 (537)
T PRK13382 265 IVTRRRFDPEATLDL----------IDRHRATGLAVVPVMFDRIMDLPAE------VRNRYSGRSLRFAAASGSRMRPDV 328 (537)
T ss_pred EEECCCcCHHHHHHH----------HHHhCCEEEEehHHHHHHHHcCCch------hcccCCccceeEEEEcCCCCCHHH
Confidence 999999999999998 8889999999999999998775211 111234678999999999999999
Q ss_pred HHHHHHHhCCcccccccCCcCccccccc
Q 018211 320 MQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
.+.|.+.+|.++++.||+||++.++..+
T Consensus 329 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~ 356 (537)
T PRK13382 329 VIAFMDQFGDVIYNNYNATEAGMIATAT 356 (537)
T ss_pred HHHHHHHcCCcEEecccccccCcceecC
Confidence 9999999999999999999999876544
No 20
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-41 Score=330.62 Aligned_cols=314 Identities=26% Similarity=0.382 Sum_probs=262.0
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.|.+.++.+|+++|+.++++++||+||++++.++|..|.+ .|+++||+|+++++|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~g~~V~l~~~~~~~ 67 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAA-----------------LGIGKGDRVAIWAPNSPH 67 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChH
Confidence 468899999999999999999999999999999999999999998 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-ceeccCCCCCCC-------Cc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVPNVS-------SE 152 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~ 152 (359)
++++++||+++|++++|+++..+.+++..+++++++++++++................ ...++....... ..
T Consensus 68 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (513)
T PRK07656 68 WVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTF 147 (513)
T ss_pred HHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccH
Confidence 9999999999999999999999999999999999999999988766555443322221 111111111000 00
Q ss_pred ccccccch-hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHH
Q 018211 153 TTVFDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (359)
Q Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~ 231 (359)
........ .........+++++|+|||||||.||+|.++|.++...+......++..++|++++..|++|.+++...++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
T PRK07656 148 TDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVN 227 (513)
T ss_pred HHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHH
Confidence 11111000 11223346689999999999999999999999999998888888889999999999999999999988889
Q ss_pred HhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEec
Q 018211 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (359)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 311 (359)
.++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+..... ...++++|.+++|
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~~--------~~~~~~l~~v~~~ 289 (513)
T PRK07656 228 APLMRGATILPLPVFDPDEVFRL----------IETERITVLPGPPTMYNSLLQHPDRS--------AEDLSSLRLAVTG 289 (513)
T ss_pred HHHHcCceEEecCcCCHHHHHHH----------HHHhCCeEEechHHHHHHHHcCCCcC--------CCCccceeeEEec
Confidence 99999999999988899999999 88899999999999999998864321 2356889999999
Q ss_pred CCCCCHHHHHHHHHHhCC-cccccccCCcCccccccccc
Q 018211 312 SSALPLPVMQQWETITGH-RLLERYGMTEGCTKGRHCWQ 349 (359)
Q Consensus 312 G~~l~~~~~~~~~~~~~~-~v~~~YG~TE~g~~~~~~~~ 349 (359)
|+++++++.++|.+.++. ++++.||+||+|++++.+..
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~ 328 (513)
T PRK07656 290 AASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRL 328 (513)
T ss_pred CCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCc
Confidence 999999999999999998 99999999999888776554
No 21
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.1e-41 Score=341.17 Aligned_cols=318 Identities=21% Similarity=0.272 Sum_probs=241.0
Q ss_pred hHHHHHHHcCCCCCCceEEee------------CC-----------ccccHHHHHHHHHHHHHHHhhCCCCCcccccccc
Q 018211 2 EVFKAAYKKGSMARDSVAIRA------------DQ-----------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~------------~~-----------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~ 58 (359)
|+.+.|.+.++.+|+++|+.+ ++ +.+||+|+.++++++|+.|.+
T Consensus 59 t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~------------- 125 (696)
T PLN02387 59 TLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA------------- 125 (696)
T ss_pred CHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-------------
Confidence 678899999999999999942 11 248999999999999999999
Q ss_pred ccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC
Q 018211 59 NSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA 138 (359)
Q Consensus 59 ~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~ 138 (359)
+|+++||+|+|+++|++||+++++||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.......+.
T Consensus 126 ----lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~ 201 (696)
T PLN02387 126 ----LGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLET 201 (696)
T ss_pred ----hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCC
Confidence 7999999999999999999999999999999999999999999999999999999999998776666555443332
Q ss_pred c--eeccCCCCCCCC-------------ccccccc--chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHH
Q 018211 139 K--FSLIPPVPNVSS-------------ETTVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM 201 (359)
Q Consensus 139 ~--~~~~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~ 201 (359)
. ++.++....... ..++... ..........++|+++|+|||||||.||||++||++++.++..
T Consensus 202 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~ 281 (696)
T PLN02387 202 VKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAG 281 (696)
T ss_pred ceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHH
Confidence 1 222222110000 0000000 0001112345799999999999999999999999999998877
Q ss_pred HHHhh-ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCCh--------hHHHHHHHhhcCCCCCCCCCccee
Q 018211 202 LTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV--------RGIWQRWRESYPVNGNRAGEAITA 272 (359)
Q Consensus 202 ~~~~~-~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~vt~ 272 (359)
....+ ++.++|++++++|++|.+++.. .+.++..|+++.+...... ..++.. ++++++|+
T Consensus 282 ~~~~~~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~----------i~~~~pT~ 350 (696)
T PLN02387 282 VMTVVPKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGD----------ASALKPTL 350 (696)
T ss_pred HHhhcCCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhh----------HHHhCCcE
Confidence 66553 5788999999999999999865 4445777888776543211 223344 77899999
Q ss_pred eecchHHHHHHHhhhhhhhH---------------------------------------HHHHHHHhhhccceEEEecCC
Q 018211 273 FTGVPTMYTRLIQGYEAMDT---------------------------------------ELQAASASAAKQLRLMMCGSS 313 (359)
Q Consensus 273 ~~~~P~~~~~l~~~~~~~~~---------------------------------------~~~~~~~~~~~~l~~i~~~G~ 313 (359)
+.++|.+++.+.+....... ...+.+....+++|.+++||+
T Consensus 351 ~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGa 430 (696)
T PLN02387 351 MTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGA 430 (696)
T ss_pred EEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCC
Confidence 99999999999865321100 001111222378999999999
Q ss_pred CCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 314 ALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 314 ~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
++++++.+.+...+|++++++||+||+++.++..
T Consensus 431 pl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~ 464 (696)
T PLN02387 431 PLSGDTQRFINICLGAPIGQGYGLTETCAGATFS 464 (696)
T ss_pred CCCHHHHHHHHHHcCCCeeEeechhhcccceeec
Confidence 9999998888877899999999999998765544
No 22
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.7e-42 Score=326.89 Aligned_cols=307 Identities=28% Similarity=0.443 Sum_probs=238.3
Q ss_pred HHHcCCCCCCceEEee-CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHH
Q 018211 7 AYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (359)
Q Consensus 7 l~~~a~~~p~~~ai~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (359)
+.++|+.+||++|+++ .++++||+||.++++++|..|.+ +|+++|++|+++++|++++++++
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~-----------------~g~~~~~~V~i~~~n~~~~~~~~ 63 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRK-----------------LGVKKGDRVAILLPNSIEFVVAF 63 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHH-----------------TTSSTTSEEEEEESSSHHHHHHH
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHH-----------------hCCCccccccccCCccceeeeee
Confidence 5678899999999999 99999999999999999999998 79999999999999999999999
Q ss_pred HHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEe----ccccHHHHHHHhhhcC-Cc-eeccCCCCCCCCcccccccc
Q 018211 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS----TEDYREVLQNVASKSG-AK-FSLIPPVPNVSSETTVFDQS 159 (359)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 159 (359)
+||+++|++++|+++.++.+++.++++.++++++|+ +......+........ .. ...++.... ..........
T Consensus 64 ~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 142 (417)
T PF00501_consen 64 LACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDL-PKKEALKSAS 142 (417)
T ss_dssp HHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSC-TTCHHHHHHH
T ss_pred cccccccccccccccccccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccc-cccccccccc
Confidence 999999999999999999999999999999999996 3322233333332211 11 222221111 1111110000
Q ss_pred hhhhcCC--CCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHH--HhhccCCCceEEEecCchhhHHHHHHHHHhhh
Q 018211 160 QAEKMDG--QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT--EAWEYTSADQFLHCLPLHHVHGLFNALLAPLY 235 (359)
Q Consensus 160 ~~~~~~~--~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~--~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~ 235 (359)
....... ..++++++++|||||||.||+|.++|++++..+..+. ..++++ |++++.+|++|.++++..++.++.
T Consensus 143 ~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~ 220 (417)
T PF00501_consen 143 LSDEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALF 220 (417)
T ss_dssp HCHCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHH
T ss_pred cccccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccccccc
Confidence 0000000 1569999999999999999999999999999887754 223333 699999999999999678999999
Q ss_pred cCcEEEEcCCCCh---hHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecC
Q 018211 236 AGATVEFMPKFSV---RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (359)
Q Consensus 236 ~G~~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 312 (359)
.|+++++++.+.. +.+++. ++++++|++.++|.++..++++.+. .. .....++++||.++++|
T Consensus 221 ~G~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~~~-~~---~~~~~~l~~lr~v~~~G 286 (417)
T PF00501_consen 221 SGATLVLPSPFDLFDPESLLEL----------ISRYKPTILFAVPSMLEALLQSPEE-KT---KISKKDLSSLRTVISGG 286 (417)
T ss_dssp CTSEEEEESSHHHHHHHHHHHH----------HHHHTESEEEEEHHHHHHHHHHHHT-TH---HGTTTTGTT-SEEEEES
T ss_pred ccccccccccccccccccchhc----------ccccccccccccccccccccccccc-cc---ccccccccccccccccc
Confidence 9999999997654 556777 7889999999999999999874211 10 11234788899999999
Q ss_pred CCCCHHHHHHHHHHhCC-cccccccCCcCccccccc
Q 018211 313 SALPLPVMQQWETITGH-RLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 313 ~~l~~~~~~~~~~~~~~-~v~~~YG~TE~g~~~~~~ 347 (359)
+++++++.+++++.++. ++++.||+||++++++..
T Consensus 287 ~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~ 322 (417)
T PF00501_consen 287 EPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIR 322 (417)
T ss_dssp ST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEE
T ss_pred ccCChhhccccccccccccceecccccccceeeecc
Confidence 99999999999999987 999999999999988755
No 23
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.5e-41 Score=335.07 Aligned_cols=311 Identities=19% Similarity=0.241 Sum_probs=243.8
Q ss_pred HHHHHHcCCCCCCceEEeeCC------ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC
Q 018211 4 FKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (359)
Q Consensus 4 ~~~l~~~a~~~p~~~ai~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n 77 (359)
.+.|.++++.+|+++|+++.+ +++||+||.+++.++|+.|.+ +|+++||+|+++++|
T Consensus 60 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 122 (625)
T TIGR02188 60 YNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-----------------LGVKKGDRVAIYMPM 122 (625)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 445667788899999998643 589999999999999999999 799999999999999
Q ss_pred CHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc---------HHHHHHHhhhcC--Cc-eeccCC
Q 018211 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSG--AK-FSLIPP 145 (359)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~--~~-~~~~~~ 145 (359)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.+.....+ .. ...+..
T Consensus 123 ~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (625)
T TIGR02188 123 IPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRR 202 (625)
T ss_pred CHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcC
Confidence 999999999999999999999999999999999999999999997643 222333222222 11 122111
Q ss_pred CCCC---C-----Ccccccccc-hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHH-HHHhhccCCCceEE
Q 018211 146 VPNV---S-----SETTVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFL 215 (359)
Q Consensus 146 ~~~~---~-----~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~l 215 (359)
.... . ...+..... .........++++++|+|||||||.||||+++|.+++..... ....+++.++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~ 282 (625)
T TIGR02188 203 TGNPVPWVEGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFW 282 (625)
T ss_pred CCCCcCccccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEE
Confidence 1100 0 000000000 011122345689999999999999999999999998755433 34456888999999
Q ss_pred EecCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhh
Q 018211 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (359)
Q Consensus 216 ~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 291 (359)
+..|++|..+..+.++.+|..|+++++.+. +++..+++. ++++++|++..+|++++.+.+....
T Consensus 283 ~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~-- 350 (625)
T TIGR02188 283 CTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEI----------IEKHKVTIFYTAPTAIRALMRLGDE-- 350 (625)
T ss_pred ECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCc--
Confidence 999999999887778899999999999763 478899998 8899999999999999999875321
Q ss_pred HHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC---CcccccccCCcCccccccc
Q 018211 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 292 ~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~---~~v~~~YG~TE~g~~~~~~ 347 (359)
.....++++||.++++|+++++++.+++.+.++ +++++.||+||+|+.++..
T Consensus 351 ----~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~ 405 (625)
T TIGR02188 351 ----WVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITP 405 (625)
T ss_pred ----ccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeec
Confidence 122356889999999999999999999999885 7999999999999875544
No 24
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-41 Score=334.03 Aligned_cols=315 Identities=19% Similarity=0.202 Sum_probs=239.3
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC------ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~ 75 (359)
++.+.|.++++.+|+++|+++.+ +.+||+||.++++++|..|.+ +|+++||+|++++
T Consensus 50 ~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~ 112 (624)
T PRK12582 50 SIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD-----------------LGLDPGRPVMILS 112 (624)
T ss_pred CHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEec
Confidence 67889999999999999998743 689999999999999999998 6999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeeeecCCCCCH-----HHHHHHHhhCCceEEEecccc--HHHHHHHhhhcCCceeccCCCCC
Q 018211 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPE-----SELLHVMHDSDISMVLSTEDY--REVLQNVASKSGAKFSLIPPVPN 148 (359)
Q Consensus 76 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 148 (359)
+|+++|+++++||+++|++++|+++.++. +++.++++.++++++|++... ...+.... ........+.....
T Consensus 113 ~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 191 (624)
T PRK12582 113 GNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALD-LLDVTVVHVTGPGE 191 (624)
T ss_pred CCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhh-hcCceEEEEcCCCc
Confidence 99999999999999999999999999885 899999999999999998642 12222211 11122222211110
Q ss_pred C---CCcccccccch----hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCC---CceEEEec
Q 018211 149 V---SSETTVFDQSQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS---ADQFLHCL 218 (359)
Q Consensus 149 ~---~~~~~~~~~~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~---~d~~l~~~ 218 (359)
. ........... ........++++++|+|||||||.||||++||++++.+.......+.... .++++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~l 271 (624)
T PRK12582 192 GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWM 271 (624)
T ss_pred ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEec
Confidence 0 00000100000 01112345689999999999999999999999999987766555444443 58999999
Q ss_pred CchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHH
Q 018211 219 PLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (359)
Q Consensus 219 pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (359)
|++|.+++...++.++..|+++++.+. +++..+.+.+.. ++++++|++.++|.++..+.+..... ...
T Consensus 272 Pl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~-------i~~~~~t~~~~vP~~~~~l~~~~~~~----~~~ 340 (624)
T PRK12582 272 PWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRN-------LREISPTVYGNVPAGYAMLAEAMEKD----DAL 340 (624)
T ss_pred hHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHH-------HHhcCCeEEeccCHHHHHHHHHHhhC----HHH
Confidence 999999987777888999999999763 444433333222 78899999999999999887642211 122
Q ss_pred HHhhhccceEEEecCCCCCHHHHHHHHHHh------CCcccccccCCcCccccc
Q 018211 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT------GHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 298 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~------~~~v~~~YG~TE~g~~~~ 345 (359)
...++++||.+++||+++++++.++|.+.+ ++++++.||+||+++++.
T Consensus 341 ~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~ 394 (624)
T PRK12582 341 RRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTT 394 (624)
T ss_pred HHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceee
Confidence 345678999999999999999999998863 368999999999987665
No 25
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.1e-41 Score=324.14 Aligned_cols=303 Identities=24% Similarity=0.349 Sum_probs=254.6
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.++|.+.|+.+|+++|+.++++.+||.||.++++++|..|.++ .|+.+|++|+++++|++++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~----------------~g~~~~~~V~i~~~~~~~~ 66 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYE----------------LNVKKGERIAILSQNSLEY 66 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 467899999999999999999999999999999999999999753 5999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-ceeccCCCCCCCCcccccccch
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVPNVSSETTVFDQSQ 160 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (359)
+++++|++++|++++|+++..+.+++..+++.+++++++++++..+.+......... ....+..... .... .
T Consensus 67 ~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~ 139 (496)
T PRK06839 67 IVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKE------IEDR-K 139 (496)
T ss_pred HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHh------hhcc-C
Confidence 999999999999999999999999999999999999999998776666554433221 1111111110 0000 0
Q ss_pred hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEE
Q 018211 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i 240 (359)
........++++++|+|||||||.||+|.++|.++..........+++..+|+++..+|++|..++...++.++..|+++
T Consensus 140 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~ 219 (496)
T PRK06839 140 IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVI 219 (496)
T ss_pred CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEE
Confidence 11122345588999999999999999999999999877776677778889999999999999999877678899999999
Q ss_pred EEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHH
Q 018211 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (359)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~ 320 (359)
++.+.++++.+++. ++++++|++.++|.+++.++.... ....+++++|.+++||+++++++.
T Consensus 220 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gG~~~~~~~~ 281 (496)
T PRK06839 220 IVPRKFEPTKALSM----------IEKHKVTVVMGVPTIHQALINCSK--------FETTNLQSVRWFYNGGAPCPEELM 281 (496)
T ss_pred EEccCCCHHHHHHH----------HHhhCCeEEEehHHHHHHHHhCcc--------cccCCCcccceEEECCCCCCHHHH
Confidence 99999999999998 889999999999999999987632 122457899999999999999999
Q ss_pred HHHHHHhCCcccccccCCcCcccccc
Q 018211 321 QQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 321 ~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
+.+.+. |+++++.||+||++.++..
T Consensus 282 ~~~~~~-g~~~~~~YG~tE~~~~~~~ 306 (496)
T PRK06839 282 REFIDR-GFLFGQGFGMTETSPTVFM 306 (496)
T ss_pred HHHHHh-CCeeEeeccCCCCCcceEe
Confidence 999886 9999999999999975543
No 26
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=5.2e-41 Score=328.28 Aligned_cols=311 Identities=21% Similarity=0.300 Sum_probs=254.4
Q ss_pred ChHHHHHHHcCCCCCCceEEeeC--CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC
Q 018211 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~ 78 (359)
||+.+.+.++++.+|+++|+++. ++++||.||.++++++|+.|.+ .|+++||+|+++++|+
T Consensus 23 ~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-----------------~g~~~gd~V~i~~~~~ 85 (537)
T PLN02246 23 LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHK-----------------LGIRQGDVVMLLLPNC 85 (537)
T ss_pred CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCC
Confidence 57889999999999999999875 4789999999999999999998 7999999999999999
Q ss_pred HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCC-CCCcccccc
Q 018211 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-VSSETTVFD 157 (359)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 157 (359)
++++++++|++++|++++|+++.++.+++..+++.+++++++++....+.+...........+.++.... .........
T Consensus 86 ~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (537)
T PLN02246 86 PEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQ 165 (537)
T ss_pred hHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHhc
Confidence 9999999999999999999999999999999999999999999987766665543322222222221110 000000000
Q ss_pred cc-hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH----hhccCCCceEEEecCchhhHHHHHHHHH
Q 018211 158 QS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLA 232 (359)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 232 (359)
.. .........++++++++|||||||.||||.++|+++......... .+++..+|+++..+|++|.+++...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 245 (537)
T PLN02246 166 ADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLC 245 (537)
T ss_pred CCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHH
Confidence 00 001112345689999999999999999999999999887665433 4678899999999999999998777888
Q ss_pred hhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecC
Q 018211 233 PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (359)
Q Consensus 233 ~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 312 (359)
++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+... .....++++|.+++||
T Consensus 246 ~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~--------~~~~~~~~lr~~~~gg 307 (537)
T PLN02246 246 GLRVGAAILIMPKFEIGALLEL----------IQRHKVTIAPFVPPIVLAIAKSPV--------VEKYDLSSIRMVLSGA 307 (537)
T ss_pred HHhcCCEEEEeCCCCHHHHHHH----------HHHhCceEEEcchHHHHHHhcCcc--------ccccCccceeEEEEec
Confidence 9999999999999999999998 889999999999999999877532 1223567899999999
Q ss_pred CCCCHHHHHHHHHHh-CCcccccccCCcCcccccc
Q 018211 313 SALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 313 ~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
+++++++.+.+++.+ +..+++.||+||++++++.
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 342 (537)
T PLN02246 308 APLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAM 342 (537)
T ss_pred CcCCHHHHHHHHHHcCCCeEeccccccccCccccc
Confidence 999999999999988 7889999999999876544
No 27
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-41 Score=336.50 Aligned_cols=321 Identities=21% Similarity=0.302 Sum_probs=238.7
Q ss_pred hHHHHHHHcCCCCCCceEEeeC---------------------------CccccHHHHHHHHHHHHHHHhhCCCCCcccc
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD---------------------------QKSYSYDQLASSALRISSLLCSNDLKTTSEK 54 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~---------------------------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~ 54 (359)
|+.+.|.++++.+|+++|+.+. ++++||+||.++++++|..|.+
T Consensus 70 t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~--------- 140 (700)
T PTZ00216 70 NFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE--------- 140 (700)
T ss_pred CHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH---------
Confidence 5789999999999999999862 4789999999999999999999
Q ss_pred ccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhh
Q 018211 55 TKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (359)
Q Consensus 55 ~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (359)
+|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++......+.....
T Consensus 141 --------~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~ 212 (700)
T PTZ00216 141 --------LGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMK 212 (700)
T ss_pred --------hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhh
Confidence 799999999999999999999999999999999999999999999999999999999998765544433222
Q ss_pred h--cC-CceeccCCCCCCC--------Ccccccc-----cchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHH
Q 018211 135 K--SG-AKFSLIPPVPNVS--------SETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ 198 (359)
Q Consensus 135 ~--~~-~~~~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~ 198 (359)
. .+ ..++.++...... ...+... ...........++|+++|+|||||||.||||++||+++++.
T Consensus 213 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 213 SGGMPNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred hccCCceEEEEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 1 11 1222222211100 0000000 00011122345789999999999999999999999999998
Q ss_pred HHHHHHhh----c-cCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceee
Q 018211 199 VQMLTEAW----E-YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273 (359)
Q Consensus 199 ~~~~~~~~----~-~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~ 273 (359)
+......+ + ..++|++++++|++|.+++.. ....+..|+++++. ++..+++.+.. ....+.++++|++
T Consensus 293 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~---~~~~l~~~~~~---~~~~l~~~~pT~~ 365 (700)
T PTZ00216 293 ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG---SPRTLTDTFAR---PHGDLTEFRPVFL 365 (700)
T ss_pred HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC---CHHHhhhhhcc---ccchHHHcCCcEE
Confidence 77665443 2 367899999999999999854 45557888888763 34444442110 0112778999999
Q ss_pred ecchHHHHHHHhhhhhhhHH---------------------------------HHHHHHhhhccceEEEecCCCCCHHHH
Q 018211 274 TGVPTMYTRLIQGYEAMDTE---------------------------------LQAASASAAKQLRLMMCGSSALPLPVM 320 (359)
Q Consensus 274 ~~~P~~~~~l~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~i~~~G~~l~~~~~ 320 (359)
.++|.+++.+.+........ ....+....+++|.+++||+++++++.
T Consensus 366 ~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~ 445 (700)
T PTZ00216 366 IGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQ 445 (700)
T ss_pred EechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 99999999987653211000 001112223789999999999999999
Q ss_pred HHHHHHhCCcccccccCCcCccccccc
Q 018211 321 QQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 321 ~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
++++..++ +++++||+||+++.++..
T Consensus 446 ~~~~~~~~-~l~~~YG~TEt~~~~~~~ 471 (700)
T PTZ00216 446 EFVNVVFG-MVIQGWGLTETVCCGGIQ 471 (700)
T ss_pred HHHHHHhh-hHhhccCccccccccccc
Confidence 88887778 999999999998765543
No 28
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=4e-41 Score=318.33 Aligned_cols=321 Identities=23% Similarity=0.317 Sum_probs=250.8
Q ss_pred ChHHHHHHHcCCCCCCceEEee--------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 018211 1 MEVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~--------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (359)
+|+++.+.+.+..+|+.+++-. ..+++||+|..+++..++..|.. +|+++++.||
T Consensus 75 ~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-----------------lG~~~~~~VG 137 (691)
T KOG1256|consen 75 LTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-----------------LGVKEDSKVG 137 (691)
T ss_pred ccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCceEE
Confidence 4788999999999999999964 24799999999999999999998 7999999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEec-cccHHHHHHHhhh--cC-Cceecc-CCCC
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST-EDYREVLQNVASK--SG-AKFSLI-PPVP 147 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~--~~-~~~~~~-~~~~ 147 (359)
|+..|++||++++.||...|++.||++.+++++.+.+|++.+...++|+| +...+.+.+.... .+ .+.++. ....
T Consensus 138 Iy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~ 217 (691)
T KOG1256|consen 138 IYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPS 217 (691)
T ss_pred EeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCc
Confidence 99999999999999999999999999999999999999999999999999 4555555554442 22 222222 1111
Q ss_pred C------------CCCcccccccc--hhhhc-CCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHH---HHHh---h
Q 018211 148 N------------VSSETTVFDQS--QAEKM-DGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM---LTEA---W 206 (359)
Q Consensus 148 ~------------~~~~~~~~~~~--~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~---~~~~---~ 206 (359)
. +.++.++.+.. ..... ....++|.+.|+|||||||.||||++||+|++..+.. .... .
T Consensus 218 ~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~ 297 (691)
T KOG1256|consen 218 DELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAK 297 (691)
T ss_pred hhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhccccc
Confidence 0 11111111111 11122 4678899999999999999999999999999996543 1111 1
Q ss_pred ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhh
Q 018211 207 EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQG 286 (359)
Q Consensus 207 ~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 286 (359)
....+|++++++||+|++.++...+ .++.|+.+.+.+. |+..+.++ +++.+||.+.++|.+++++...
T Consensus 298 ~~~~~dv~lSyLPLAHi~er~~~~~-~~~~G~~IgF~~g-D~~~l~~d----------lk~lkPT~f~~VPRVl~riye~ 365 (691)
T KOG1256|consen 298 ATVGDDVYLSYLPLAHIFERVVELY-TFYIGAKIGFARG-DILKLTDD----------LKELKPTVFPGVPRVLERIYEG 365 (691)
T ss_pred ccccCceEEEeCcHHHHHHHHHHHh-HhhcccEEEEecC-ChHHHHHH----------HHHhCCcEEeccHhHHHHHHHH
Confidence 2334799999999999999986544 4799999999986 88888787 7788999999999999999876
Q ss_pred hhhhh----------------H---------------------HHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCC
Q 018211 287 YEAMD----------------T---------------------ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH 329 (359)
Q Consensus 287 ~~~~~----------------~---------------------~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~ 329 (359)
.++.- . .+.+.+....+++|.+++|++|+++++.+.++..+|+
T Consensus 366 I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~ 445 (691)
T KOG1256|consen 366 IQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGC 445 (691)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCc
Confidence 43210 0 0112334456889999999999999999999999899
Q ss_pred cccccccCCcCcccccccccc
Q 018211 330 RLLERYGMTEGCTKGRHCWQS 350 (359)
Q Consensus 330 ~v~~~YG~TE~g~~~~~~~~~ 350 (359)
+|+++||+|||++.++...+.
T Consensus 446 ~v~eGYGlTEts~g~~~~~~~ 466 (691)
T KOG1256|consen 446 RVLEGYGLTETSAGTTLTLPG 466 (691)
T ss_pred eeeecccccccCCceEeccCC
Confidence 999999999999655544443
No 29
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.4e-41 Score=329.28 Aligned_cols=314 Identities=22% Similarity=0.277 Sum_probs=252.9
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.+.++++.+|+++|+.++++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~-----------------~gi~~gd~V~l~~~n~~~ 94 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRA-----------------LGVRPGDRVAIVLPNCPQ 94 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCHH
Confidence 468889999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCcee-ccCCCC------------
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFS-LIPPVP------------ 147 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------ 147 (359)
++++++|++++|++++|+++.++.+++.+++++++++++|++......+..+......... .+....
T Consensus 95 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 174 (573)
T PRK05605 95 HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRL 174 (573)
T ss_pred HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccc
Confidence 9999999999999999999999999999999999999999987765555444332221111 110000
Q ss_pred -----------------CCCCcccccccch-h----hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh
Q 018211 148 -----------------NVSSETTVFDQSQ-A----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA 205 (359)
Q Consensus 148 -----------------~~~~~~~~~~~~~-~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~ 205 (359)
............. . ........+++++++|||||||.||+|.++|.++...+......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 254 (573)
T PRK05605 175 PIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAW 254 (573)
T ss_pred ccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhh
Confidence 0000000000000 0 11122456899999999999999999999999998877654433
Q ss_pred hc--cCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHH
Q 018211 206 WE--YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 206 ~~--~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 283 (359)
+. ...++++++.+|++|.+++...++.++..|+++++.+.++++.+++. ++++++|.+.++|.+++.+
T Consensus 255 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l 324 (573)
T PRK05605 255 VPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDA----------MKKHPPTWLPGVPPLYEKI 324 (573)
T ss_pred ccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHH----------HHHhCCEEEEchHHHHHHH
Confidence 32 23478999999999999987778888999999999998999999999 8889999999999999999
Q ss_pred HhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccccc
Q 018211 284 IQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCWQ 349 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~~ 349 (359)
.+.... ...+++++|.+++||+++++++.++|.+.++.++++.||+||++++++....
T Consensus 325 ~~~~~~--------~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~ 382 (573)
T PRK05605 325 AEAAEE--------RGVDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPM 382 (573)
T ss_pred HhCccc--------cCCCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCc
Confidence 876322 1234678999999999999999999999889999999999999987766543
No 30
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-40 Score=331.88 Aligned_cols=312 Identities=17% Similarity=0.140 Sum_probs=234.7
Q ss_pred HHHHHHcCCC--CCCceEEeeC------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc
Q 018211 4 FKAAYKKGSM--ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (359)
Q Consensus 4 ~~~l~~~a~~--~p~~~ai~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~ 75 (359)
.+.|.++++. +|+++|+++. .+++||+||.++++++|+.|++ +|+++||+|++++
T Consensus 62 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GDrV~i~~ 124 (647)
T PTZ00237 62 YNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-----------------LNISKNDNVLIYM 124 (647)
T ss_pred HHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEC
Confidence 3445555543 7999999872 3689999999999999999999 7999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc---------cHHHHHHHhhhcC---Cceecc
Q 018211 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED---------YREVLQNVASKSG---AKFSLI 143 (359)
Q Consensus 76 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~---~~~~~~ 143 (359)
+|++++++++|||+++|++++|+++.++.+++.+++++++++++|++.. ..+.+.+...... ..++.+
T Consensus 125 ~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 204 (647)
T PTZ00237 125 ANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITL 204 (647)
T ss_pred CCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999752 2223332222111 112211
Q ss_pred CCCC--------------CCCC---ccccccc------chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhH-HHHHH
Q 018211 144 PPVP--------------NVSS---ETTVFDQ------SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKS-IDAQV 199 (359)
Q Consensus 144 ~~~~--------------~~~~---~~~~~~~------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~-l~~~~ 199 (359)
.... .... ..+.... ..........++++++|+|||||||.||||+++|.+ +....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~ 284 (647)
T PTZ00237 205 FRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLK 284 (647)
T ss_pred EcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHH
Confidence 1000 0000 0000000 000011234678999999999999999999999998 44433
Q ss_pred HHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC--CC----hhHHHHHHHhhcCCCCCCCCCcceee
Q 018211 200 QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK--FS----VRGIWQRWRESYPVNGNRAGEAITAF 273 (359)
Q Consensus 200 ~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~--~~----~~~~~~~~~~~~~~~~~i~~~~vt~~ 273 (359)
......+....+|++++..|++|..+.. .++.+|+.|+++++.+. +. +..+++. ++++++|++
T Consensus 285 ~~~~~~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~----------i~~~~vt~~ 353 (647)
T PTZ00237 285 YYWRSIIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNT----------IEKHKVTHT 353 (647)
T ss_pred HHHHHhcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEeCCCCCCCCCchHHHHHH----------HHHhCeEEE
Confidence 3334455677789999999999987664 58889999999999764 12 5678888 889999999
Q ss_pred ecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 274 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
.++|++++.+.+...... ......++++||.+++||+++++++.+++++.+|+++++.||+||+++++..
T Consensus 354 ~~~P~~~~~l~~~~~~~~---~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~ 423 (647)
T PTZ00237 354 LTLPKTIRYLIKTDPEAT---IIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLY 423 (647)
T ss_pred EeCHHHHHHHHhhCcccc---ccccccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhc
Confidence 999999999987421100 0012346889999999999999999999999999999999999999976543
No 31
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=8.8e-41 Score=304.75 Aligned_cols=309 Identities=21% Similarity=0.232 Sum_probs=260.3
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC--ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
++.+.+.++++++|+|+|+++.+ +++||+|+.++++++|+.|+. .|++.||.|+++|+|++
T Consensus 78 ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~-----------------~~l~~GD~VAL~men~p 140 (649)
T KOG1179|consen 78 TIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHA-----------------EGLKAGDVVALLMENRP 140 (649)
T ss_pred cHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHH-----------------hhcccCCEEEEecCCCh
Confidence 67899999999999999999976 799999999999999999999 68999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCcee---ccCCCCCCCCccccc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFS---LIPPVPNVSSETTVF 156 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 156 (359)
||+..|++++++|++...||+++..+-+.|.++.++++.+|++.+....+.++.+......+ ...........+++.
T Consensus 141 efv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~ 220 (649)
T KOG1179|consen 141 EFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLL 220 (649)
T ss_pred hHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999988887777443332211 111111111111111
Q ss_pred ---ccc-----hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHH
Q 018211 157 ---DQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (359)
Q Consensus 157 ---~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 228 (359)
+.. +.......+-.++++.+|||||||.||+.+++|..+..........++++++|+++..+|++|..+.+.
T Consensus 221 ~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~il 300 (649)
T KOG1179|consen 221 AKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGIL 300 (649)
T ss_pred HhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHH
Confidence 111 112233445578999999999999999999999999998887888999999999999999999999999
Q ss_pred HHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEE
Q 018211 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (359)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i 308 (359)
++..+|..|+|+++-.+|++..+|++ ..+|++|++.-+--+++.|+..+.+.. ..-+.+|..
T Consensus 301 Gi~~~l~~GaT~VlrkKFSAS~FW~D----------C~k~~~Tv~QYIGElcRYLl~~p~~~~--------er~HkVRla 362 (649)
T KOG1179|consen 301 GIGGCLLHGATVVLRKKFSASNFWDD----------CRKYNVTVIQYIGELCRYLLNQPPSPE--------ERQHKVRLA 362 (649)
T ss_pred HHHHHHhcCceEEEecccchhhhHHH----------HHHhCCeeeehHHHHHHHHHcCCCChh--------hcCceEEEE
Confidence 99999999999999999999999999 788999999999999999999865433 234567776
Q ss_pred EecCCCCCHHHHHHHHHHhCCc-ccccccCCcCccccccc
Q 018211 309 MCGSSALPLPVMQQWETITGHR-LLERYGMTEGCTKGRHC 347 (359)
Q Consensus 309 ~~~G~~l~~~~~~~~~~~~~~~-v~~~YG~TE~g~~~~~~ 347 (359)
+ |.-+.+++++.|.++||++ |.+.||.||......++
T Consensus 363 ~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~ 400 (649)
T KOG1179|consen 363 Y--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNY 400 (649)
T ss_pred e--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeee
Confidence 6 6678999999999999865 99999999998766555
No 32
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-40 Score=329.51 Aligned_cols=308 Identities=22% Similarity=0.255 Sum_probs=251.8
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+|+.+.|.++++.+|+++|++++++.+||+||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 37 ~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~-----------------~g~~~gd~V~i~~~n~~~ 99 (600)
T PRK08279 37 RSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAA-----------------RGVGKGDVVALLMENRPE 99 (600)
T ss_pred ccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCCHH
Confidence 368899999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-ceeccCCCCC---CCCccccc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVPN---VSSETTVF 156 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~ 156 (359)
++++++||+++|++++++++.++.+++.++++.++++++|++.+..+.+......... .......... .....+..
T Consensus 100 ~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (600)
T PRK08279 100 YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLA 179 (600)
T ss_pred HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHh
Confidence 9999999999999999999999999999999999999999998877766655443222 1111111000 00000000
Q ss_pred ---ccch---hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHH
Q 018211 157 ---DQSQ---AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 157 ---~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 230 (359)
.... .........+++++|+|||||||.||||.++|.++..++......++++++|++++.+|++|.+++...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~ 259 (600)
T PRK08279 180 AAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAW 259 (600)
T ss_pred hhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHH
Confidence 0000 0111233568999999999999999999999999999999888889999999999999999999998778
Q ss_pred HHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEe
Q 018211 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (359)
Q Consensus 231 ~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~ 310 (359)
+.++..|+++++.+.+++..+++. ++++++|++.++|.+++.+....... .....++|.+
T Consensus 260 ~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~l~~~l~~~~~~~--------~~~~~~l~~~-- 319 (600)
T PRK08279 260 SSVLAAGATLALRRKFSASRFWDD----------VRRYRATAFQYIGELCRYLLNQPPKP--------TDRDHRLRLM-- 319 (600)
T ss_pred HHHHhcCcEEEEcCCCCHHHHHHH----------HHHhcceEEeehHHHHHHHHhCCCCc--------cccCcceeEE--
Confidence 888999999999999999999998 88899999999999999887652211 1134567754
Q ss_pred cCCCCCHHHHHHHHHHhCC-cccccccCCcCccccc
Q 018211 311 GSSALPLPVMQQWETITGH-RLLERYGMTEGCTKGR 345 (359)
Q Consensus 311 ~G~~l~~~~~~~~~~~~~~-~v~~~YG~TE~g~~~~ 345 (359)
+|+.+++++.++|.+.++. .+++.||+||++....
T Consensus 320 ~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~ 355 (600)
T PRK08279 320 IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFI 355 (600)
T ss_pred ecCCCCHHHHHHHHHHhCcceeeeeecccccceeec
Confidence 4778999999999999976 5999999999986433
No 33
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.1e-40 Score=326.51 Aligned_cols=308 Identities=17% Similarity=0.262 Sum_probs=244.2
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
|+.+.|.+.++.+|+++|+.+++.++||+||.++++++|..|.+ +|+++||+|+|+++|++++
T Consensus 15 ~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~Gl~~gd~Vai~~~n~~e~ 77 (579)
T PLN03102 15 TPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLIS-----------------LNITKNDVVSVLAPNTPAM 77 (579)
T ss_pred cHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCcHHH
Confidence 46778888999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC-------CceeccCCCCCCC----
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-------AKFSLIPPVPNVS---- 150 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~---- 150 (359)
++++|||+++|++++|+++.++.+++.++++.++++++|++.+..+.+........ ...+.++......
T Consensus 78 ~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (579)
T PLN03102 78 YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSS 157 (579)
T ss_pred HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcc
Confidence 99999999999999999999999999999999999999998877666555433211 1222222111000
Q ss_pred ---Ccccccccchh------hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCch
Q 018211 151 ---SETTVFDQSQA------EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (359)
Q Consensus 151 ---~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (359)
...+....... .......++++++|+|||||||.||+|+++|.++..........+.+...+++++.+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 237 (579)
T PLN03102 158 EELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMF 237 (579)
T ss_pred cccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChh
Confidence 00000000000 001123468999999999999999999999999765544444445566778999999999
Q ss_pred hhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhh
Q 018211 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (359)
Q Consensus 222 h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 301 (359)
|..++. ..+.++..|+++++.+.++++.+++. ++++++|++.++|+++..+.+... .....
T Consensus 238 h~~g~~-~~~~~~~~g~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~ 298 (579)
T PLN03102 238 HCNGWT-FTWGTAARGGTSVCMRHVTAPEIYKN----------IEMHNVTHMCCVPTVFNILLKGNS--------LDLSP 298 (579)
T ss_pred hhcchh-HHHHHHHhcCcEEeeccCChHHHHHH----------HHHcCCeEEEeChHHHHHHHhCcc--------cccCC
Confidence 999985 46778889999999998899999998 889999999999999999987521 11123
Q ss_pred hccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 302 AKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 302 ~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
.++++.+++||+++++.+.+++.+ +|.++++.||+||+++.+..
T Consensus 299 ~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~ 342 (579)
T PLN03102 299 RSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLF 342 (579)
T ss_pred cccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccc
Confidence 456788999999999999998875 69999999999999875543
No 34
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-40 Score=327.42 Aligned_cols=307 Identities=22% Similarity=0.245 Sum_probs=246.9
Q ss_pred HHHHHcCC-CCCCceEEeeC----CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 5 KAAYKKGS-MARDSVAIRAD----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 5 ~~l~~~a~-~~p~~~ai~~~----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
+.+.++++ .+|+++|+.+. .+.+||+||.++++++|..|.+ +|+++||+|+++++|++
T Consensus 47 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-----------------~gv~~gd~V~i~~~n~~ 109 (570)
T PRK04319 47 EAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-----------------LGVEKGDRVFIFMPRIP 109 (570)
T ss_pred HHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCH
Confidence 56677665 57999999874 3689999999999999999999 79999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC-Cc-eeccCCCCCC----CCcc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AK-FSLIPPVPNV----SSET 153 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~----~~~~ 153 (359)
++++++||++++|++++|+++.++.+++.++++++++++++++.......... ..+ .+ ...+...... ....
T Consensus 110 ~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (570)
T PRK04319 110 ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD--DLPSLKHVLLVGEDVEEGPGTLDFN 187 (570)
T ss_pred HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh--cCCCceEEEEECCCcCCCcCccCHH
Confidence 99999999999999999999999999999999999999999987654332211 111 11 1122111100 0000
Q ss_pred ccc-ccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHH
Q 018211 154 TVF-DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (359)
Q Consensus 154 ~~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 232 (359)
... ............++++++|+|||||||.||||.++|.+++.++......+++.++|++++..|++|..+....++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~ 267 (570)
T PRK04319 188 ALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFA 267 (570)
T ss_pred HHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHH
Confidence 000 0001111223456899999999999999999999999999888877788888999999999999999988778899
Q ss_pred hhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEec
Q 018211 233 PLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (359)
Q Consensus 233 ~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 311 (359)
++..|+++++.. .+++..+++. ++++++|++.++|++++.+.+.... .....++++||.+++|
T Consensus 268 ~l~~G~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 268 PWLNGATNVIDGGRFSPERWYRI----------LEDYKVTVWYTAPTAIRMLMGAGDD------LVKKYDLSSLRHILSV 331 (570)
T ss_pred HHhcCceEEEECCCCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhcCCc------ccccCCcccceEEEEc
Confidence 999999999875 6899999999 8889999999999999999865211 1123457899999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 312 SSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 312 G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
|+++++++.+++++.+|.++++.||+||+++++..
T Consensus 332 G~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~ 366 (570)
T PRK04319 332 GEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIA 366 (570)
T ss_pred ccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEe
Confidence 99999999999999899999999999999976543
No 35
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-40 Score=333.38 Aligned_cols=308 Identities=20% Similarity=0.161 Sum_probs=237.6
Q ss_pred hHHHH-HHHcCCCCCCceEEeeCC--------ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 018211 2 EVFKA-AYKKGSMARDSVAIRADQ--------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (359)
Q Consensus 2 ~i~~~-l~~~a~~~p~~~ai~~~~--------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (359)
|+.+. |.++...+|+++|+++.+ +++||+||.++++++|+.|++ +|+++||+|+
T Consensus 175 n~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrVa 237 (728)
T PLN03052 175 NVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-----------------LGFEKGDAIA 237 (728)
T ss_pred EHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 44443 444445689999999743 379999999999999999999 7999999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH------HHHHHHhhhcCCceeccCCC
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR------EVLQNVASKSGAKFSLIPPV 146 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~ 146 (359)
++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++... +....+.+......+++...
T Consensus 238 i~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~ 317 (728)
T PLN03052 238 IDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPAD 317 (728)
T ss_pred EEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCC
Confidence 999999999999999999999999999999999999999999999999976432 11222211111122222110
Q ss_pred CC---------CCCcccccccc-----hhhh-cCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCC
Q 018211 147 PN---------VSSETTVFDQS-----QAEK-MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA 211 (359)
Q Consensus 147 ~~---------~~~~~~~~~~~-----~~~~-~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~ 211 (359)
.. .....+..... .... ......+++++|+|||||||.||||+++|.+++.........+++.++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~ 397 (728)
T PLN03052 318 GKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKG 397 (728)
T ss_pred CCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCC
Confidence 00 00011110000 0000 111245899999999999999999999999988776655556788899
Q ss_pred ceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh
Q 018211 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (359)
Q Consensus 212 d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 290 (359)
|++++..|++|+++.+ .++.+|..|+++++.+. +++..+++. ++++++|++..+|++++.+.+...
T Consensus 398 d~~~~~~~l~w~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~----------i~~~~vT~l~~~Pt~l~~l~~~~~-- 464 (728)
T PLN03052 398 DIVCWPTNLGWMMGPW-LVYASLLNGATLALYNGSPLGRGFAKF----------VQDAKVTMLGTVPSIVKTWKNTNC-- 464 (728)
T ss_pred cEEEECCCcHHHhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHH----------HHHHCCCEEEECHHHHHHHHhcCC--
Confidence 9999999999999985 57899999999999874 466778888 888999999999999999876521
Q ss_pred hHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC-CcccccccCCcCccccc
Q 018211 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEGCTKGR 345 (359)
Q Consensus 291 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~TE~g~~~~ 345 (359)
....++++||.++++|++++++..+++.+.++ .++++.||+||+++.+.
T Consensus 465 ------~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~ 514 (728)
T PLN03052 465 ------MAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFV 514 (728)
T ss_pred ------cccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccc
Confidence 12357889999999999999999888888776 58999999999987543
No 36
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-40 Score=319.44 Aligned_cols=295 Identities=24% Similarity=0.342 Sum_probs=248.8
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
||+.+.|.++++.+|+++|+.+.++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~~~~v~i~~~~~~~ 64 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAA-----------------LGVKKGDRVALLMKNGME 64 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 789999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccch
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (359)
+++++||++++|++++|+++..+.+++..+++++++++++++............. .+..... . ....
T Consensus 65 ~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~---~----~~~~ 131 (483)
T PRK03640 65 MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGISV------KFAELMN---G----PKEE 131 (483)
T ss_pred HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhccc------cHHHHhh---c----cccc
Confidence 9999999999999999999999999999999999999999987655443322100 0000000 0 0000
Q ss_pred hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEE
Q 018211 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i 240 (359)
........++++++++|||||||.||+|.++|.++...+......++.+++|++++.+|++|..++. .++.++..|+++
T Consensus 132 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~ 210 (483)
T PRK03640 132 AEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLS-ILMRSVIYGMRV 210 (483)
T ss_pred CCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHH-HHHHHHhcCCEE
Confidence 1111223568999999999999999999999999988877777778899999999999999999985 478889999999
Q ss_pred EEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHH
Q 018211 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (359)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~ 320 (359)
++.+.+++..+++. ++++++|++.++|+++..+.+..... ....++|.+++||+++++.+.
T Consensus 211 ~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~~~---------~~~~~lr~~~~~g~~~~~~~~ 271 (483)
T PRK03640 211 VLVEKFDAEKINKL----------LQTGGVTIISVVSTMLQRLLERLGEG---------TYPSSFRCMLLGGGPAPKPLL 271 (483)
T ss_pred EecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCcCcc---------ccCCcceEEEEcCCCCCHHHH
Confidence 99999999999998 88899999999999999998652210 223689999999999999999
Q ss_pred HHHHHHhCCcccccccCCcCcccccc
Q 018211 321 QQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 321 ~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
+.+.+ +|+++++.||+||+|..++.
T Consensus 272 ~~~~~-~~~~~~~~YG~tE~~~~~~~ 296 (483)
T PRK03640 272 EQCKE-KGIPVYQSYGMTETASQIVT 296 (483)
T ss_pred HHHHH-hCCCeeeeeccCcccccccc
Confidence 98887 49999999999999865443
No 37
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.9e-40 Score=330.36 Aligned_cols=317 Identities=20% Similarity=0.267 Sum_probs=236.2
Q ss_pred hHHHHHHHcCCCCCCceEEeeC----C-----ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD----Q-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~----~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (359)
|+.+.+.+.++.+|+++|+... + +++||+|+.++++++|+.|.+ .|+++||+|+
T Consensus 43 t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~V~ 105 (660)
T PLN02430 43 TAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-----------------SGAEPGSRVG 105 (660)
T ss_pred CHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 6788999999999999999631 1 357999999999999999999 7999999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH-HHHHHHhhhcC-Cc-eeccCCCCCC
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-EVLQNVASKSG-AK-FSLIPPVPNV 149 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~~~ 149 (359)
|+++|++||+++++||+++|+++||+++.++.+++.++++.++++++|++.... +.+.......+ .. ++.+......
T Consensus 106 i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 185 (660)
T PLN02430 106 IYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEE 185 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChH
Confidence 999999999999999999999999999999999999999999999999986532 22222111111 11 1122111100
Q ss_pred ------------CCcccccccch--hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh-----ccCC
Q 018211 150 ------------SSETTVFDQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-----EYTS 210 (359)
Q Consensus 150 ------------~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~ 210 (359)
....++..... ........++|+++|+|||||||.||||++||+++..++....... ++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02430 186 ESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH 265 (660)
T ss_pred HhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC
Confidence 00000000000 0111233578999999999999999999999999998776654321 4678
Q ss_pred CceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh
Q 018211 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (359)
Q Consensus 211 ~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 290 (359)
+|++++++|++|.+++.. .+.++..|+++++... ++..+++. +.++++|++.++|.+++.+.+.....
T Consensus 266 ~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~----------l~~~~pt~~~~vP~~~~~l~~~i~~~ 333 (660)
T PLN02430 266 DDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDD----------LMELKPTLLAGVPRVFERIHEGIQKA 333 (660)
T ss_pred CCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHH----------HHHhCCcEEEecHHHHHHHHHHHHHH
Confidence 999999999999999875 4556899999988764 67788888 78899999999999999887642210
Q ss_pred h-------------------------------------HHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccc
Q 018211 291 D-------------------------------------TELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333 (359)
Q Consensus 291 ~-------------------------------------~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~ 333 (359)
. ....+.+....++||.+++||+++++++.+.++...+.++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~ 413 (660)
T PLN02430 334 LQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQ 413 (660)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeee
Confidence 0 001111222337899999999999999866554432478999
Q ss_pred cccCCcCccccccc
Q 018211 334 RYGMTEGCTKGRHC 347 (359)
Q Consensus 334 ~YG~TE~g~~~~~~ 347 (359)
.||+||++++++..
T Consensus 414 ~YG~TE~~~~~~~~ 427 (660)
T PLN02430 414 GYGLTETLGPTTLG 427 (660)
T ss_pred ecchhhhhhceEee
Confidence 99999998866544
No 38
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-40 Score=328.40 Aligned_cols=309 Identities=19% Similarity=0.243 Sum_probs=241.3
Q ss_pred HHHHHcCCCCCCceEEeeCC------ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC
Q 018211 5 KAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (359)
Q Consensus 5 ~~l~~~a~~~p~~~ai~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~ 78 (359)
+.|.++++.+|+++|+++.+ +++||+||.+++.++|..|.+ +|+++||+|+++++|+
T Consensus 71 ~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n~ 133 (637)
T PRK00174 71 NCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-----------------LGVKKGDRVAIYMPMI 133 (637)
T ss_pred HHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCC
Confidence 45667788899999999633 479999999999999999999 7999999999999999
Q ss_pred HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH---------HHHHHHhhhcC-Cc-eeccCCCC
Q 018211 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR---------EVLQNVASKSG-AK-FSLIPPVP 147 (359)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~-~~-~~~~~~~~ 147 (359)
+++++++|||+++|++++|+++.++.+++.+++++++++++|+++... +.+.......+ .. .+......
T Consensus 134 ~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (637)
T PRK00174 134 PEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTG 213 (637)
T ss_pred HHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCC
Confidence 999999999999999999999999999999999999999999876432 22222222111 11 11111110
Q ss_pred C-C--CC-----ccccccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHH-HHHhhccCCCceEEEe
Q 018211 148 N-V--SS-----ETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLHC 217 (359)
Q Consensus 148 ~-~--~~-----~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~l~~ 217 (359)
. . .. ..+.... ..........++++++|+|||||||.||||+++|.+++.+... ....+++.++|++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~ 293 (637)
T PRK00174 214 GDVDWVEGRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCT 293 (637)
T ss_pred CCcCcCCCCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEc
Confidence 0 0 00 0000000 0011122345689999999999999999999999998765443 3445678889999999
Q ss_pred cCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHH
Q 018211 218 LPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE 293 (359)
Q Consensus 218 ~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 293 (359)
.|++|..++...++.+|..|+++++.+. +++..+++. ++++++|++..+|++++.+.+....
T Consensus 294 ~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~---- 359 (637)
T PRK00174 294 ADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEV----------IDKHKVTIFYTAPTAIRALMKEGDE---- 359 (637)
T ss_pred CCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHH----------HHhcCCeEEeecHHHHHHHHhcCCc----
Confidence 9999999987778999999999999753 478889988 8899999999999999998875321
Q ss_pred HHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC---CcccccccCCcCcccccc
Q 018211 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 294 ~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~---~~v~~~YG~TE~g~~~~~ 346 (359)
.....++++||.++++|+++++++.+++.+.++ +++++.||+||+|+.+..
T Consensus 360 --~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~ 413 (637)
T PRK00174 360 --HPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMIT 413 (637)
T ss_pred --ccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEe
Confidence 112346789999999999999999999998885 799999999999986544
No 39
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-40 Score=320.85 Aligned_cols=311 Identities=23% Similarity=0.249 Sum_probs=258.7
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.+.++.+|+++|+.+.++.+||+||.+++.++|..|.+ .|+++||+|+++++|++++
T Consensus 12 ~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gi~~~~~V~l~~~~~~~~ 74 (523)
T PRK08316 12 TIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLD-----------------LGLKKGDRVAALGHNSDAY 74 (523)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHH
Confidence 57889999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCC-------CCCccc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-------VSSETT 154 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 154 (359)
+++++||+++|++++|+++..+.+++..+++.+++++++++.+....+....+.............. ......
T Consensus 75 ~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (523)
T PRK08316 75 ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFAD 154 (523)
T ss_pred HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHH
Confidence 9999999999999999999999999999999999999999988777665543332211111110000 000000
Q ss_pred ccccc-hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHh
Q 018211 155 VFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (359)
Q Consensus 155 ~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~ 233 (359)
..+.. ..........+++++|+|||||||.||+|.++|.+++.........+++.++|++++.+|++|..++...+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 234 (523)
T PRK08316 155 WAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPY 234 (523)
T ss_pred HHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHH
Confidence 00000 01122344568999999999999999999999999999888888888999999999999999999987666778
Q ss_pred hhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCC
Q 018211 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (359)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~ 313 (359)
+..|+++++.+.++++.+++. ++++++|++.++|.++..+.++.. ....+++++|.+++||+
T Consensus 235 ~~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gg~ 296 (523)
T PRK08316 235 LYVGATNVILDAPDPELILRT----------IEAERITSFFAPPTVWISLLRHPD--------FDTRDLSSLRKGYYGAS 296 (523)
T ss_pred HhcCceEEEecCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHcCcc--------cccCCcccceEEEEcCC
Confidence 999999999988899999998 888999999999999999887632 22346789999999999
Q ss_pred CCCHHHHHHHHHHh-CCcccccccCCcCccccccc
Q 018211 314 ALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 314 ~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++.++.+.+++.+ +.++++.||+||+|.++...
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 331 (523)
T PRK08316 297 IMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVL 331 (523)
T ss_pred cCCHHHHHHHHHHcCCCceeeeecccccCcccccc
Confidence 99999999999988 79999999999999876554
No 40
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=3e-40 Score=322.22 Aligned_cols=308 Identities=19% Similarity=0.220 Sum_probs=250.5
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.+.++++.+|+++|++++++++||.||.++++++|..|.+ .|+++|++|+++++|+++
T Consensus 23 ~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~~~~~ 85 (527)
T TIGR02275 23 KPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTK-----------------LGIGQGDTAVVQLPNIAE 85 (527)
T ss_pred CcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCcHH
Confidence 367889999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH-----HHHHHHhhhcC-CceeccCCCCC-CCCcc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG-AKFSLIPPVPN-VSSET 153 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 153 (359)
++++++|++++|++++++++..+.+++.++++.++++.++++.... +.......... .....+..... .....
T Consensus 86 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (527)
T TIGR02275 86 FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELF 165 (527)
T ss_pred HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhh
Confidence 9999999999999999999999999999999999999999986532 11222211111 11111111000 00000
Q ss_pred c-ccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHH-HHH
Q 018211 154 T-VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALL 231 (359)
Q Consensus 154 ~-~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~ 231 (359)
. ..............++++++|+|||||||.||+|.++|.++..++......+.++.+|+++..+|++|.+++.. .++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~ 245 (527)
T TIGR02275 166 LWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGAL 245 (527)
T ss_pred HHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHH
Confidence 0 00000011123446789999999999999999999999999998888888888999999999999999998864 478
Q ss_pred HhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEec
Q 018211 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (359)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 311 (359)
.++..|+++++.+.+++..+++. ++++++|++..+|.++..+.+... ....+++++|.+++|
T Consensus 246 ~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~--------~~~~~~~~lr~~~~g 307 (527)
T TIGR02275 246 GVFYAGGCVVLAPDPSPTDCFPL----------IERHKVTVTALVPPAVALWMQAAS--------KSRYDLSSLKLLQVG 307 (527)
T ss_pred HHHhcCCeEEECCCCCHHHHHHH----------HHHhCCeEEEecHHHHHHHHhCcc--------ccCCCccceEEEEEc
Confidence 88999999999988899999888 888999999999999998876532 122457889999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCCcCccc
Q 018211 312 SSALPLPVMQQWETITGHRLLERYGMTEGCTK 343 (359)
Q Consensus 312 G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~ 343 (359)
|+++++++.+++.+.+|.++++.||+||++..
T Consensus 308 G~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~ 339 (527)
T TIGR02275 308 GAKFSEAAARRVPAVFGCQLQQVFGMAEGLVN 339 (527)
T ss_pred CCCCCHHHHHHHHHHhCCeEEeeeccCccCcc
Confidence 99999999999999999999999999997644
No 41
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.4e-41 Score=338.25 Aligned_cols=308 Identities=23% Similarity=0.325 Sum_probs=244.7
Q ss_pred ChHHHHHHHcCCCCCC-ceEEeeC-CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC
Q 018211 1 MEVFKAAYKKGSMARD-SVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~-~~ai~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~ 78 (359)
.|+.+.|.+.++.+|+ ++|+.+. ++.+||+||.++++++|+.|.+ . +++||+|+++++|+
T Consensus 204 ~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~-----------------~-~~~gd~Val~~~n~ 265 (718)
T PRK08043 204 ETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEK-----------------Y-SVEGERIGLMLPNA 265 (718)
T ss_pred CCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHH-----------------h-cCCCceEEEEcCCc
Confidence 3678899999999998 6888763 4789999999999999999987 4 58999999999999
Q ss_pred HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH--HHhhhcC-CceeccCCCCCCCCcccc
Q 018211 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ--NVASKSG-AKFSLIPPVPNVSSETTV 155 (359)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 155 (359)
+++++++||++++|++++|+++.++.+++.++++++++++++++.+..+... ....... .....+............
T Consensus 266 ~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (718)
T PRK08043 266 TISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADK 345 (718)
T ss_pred HHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHH
Confidence 9999999999999999999999999999999999999999999876543211 0111111 111111111000000000
Q ss_pred ----cc-cchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHH
Q 018211 156 ----FD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 156 ----~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 230 (359)
.. ...........++|+++|+|||||||.||||++||.++...+......++++++|++++.+|++|.+++...+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~ 425 (718)
T PRK08043 346 LWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGL 425 (718)
T ss_pred HHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHH
Confidence 00 0000011234568999999999999999999999999999888877778899999999999999999987778
Q ss_pred HHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEE
Q 018211 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (359)
Q Consensus 231 ~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~ 309 (359)
+.++..|+++++.+. ++...+++. +.++++|++..+|+++..+.+.. ...++++||.++
T Consensus 426 ~~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~~----------~~~~~~~lr~i~ 485 (718)
T PRK08043 426 FTPLLTGAEVFLYPSPLHYRIVPEL----------VYDRNCTVLFGTSTFLGNYARFA----------NPYDFARLRYVV 485 (718)
T ss_pred HHHHHcCCEEEEeCCcccHHHHHHH----------HHhcCCeEEEchHHHHHHhhhhc----------CcccccceEEEE
Confidence 899999999998875 566677777 78899999999999998775431 124578999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 310 CGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 310 ~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
+||+++++++.+.|++.+|+++++.||+||++++++.
T Consensus 486 ~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~ 522 (718)
T PRK08043 486 AGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSI 522 (718)
T ss_pred EeCccCCHHHHHHHHHHcCCCeecccCcccccceEEe
Confidence 9999999999999999999999999999999876554
No 42
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-40 Score=320.94 Aligned_cols=312 Identities=22% Similarity=0.327 Sum_probs=262.1
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.|.+.++.+|+++|+.+.++.+||+||.+++.++|+.|.+ .|+++|++|+++++|+++
T Consensus 6 ~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~g~~~~~~V~l~~~~~~~ 68 (521)
T PRK06187 6 LTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRA-----------------LGVKKGDRVAVFDWNSHE 68 (521)
T ss_pred CCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 468899999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC--ceeccCCCCC------CCCc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPN------VSSE 152 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~ 152 (359)
++++++||+++|++++++++..+.+++..+++.+++++++++.+..+.+....+..+. .......... ....
T Consensus 69 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (521)
T PRK06187 69 YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEY 148 (521)
T ss_pred HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccH
Confidence 9999999999999999999999999999999999999999999887777666554432 1222211110 0011
Q ss_pred cccccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHH
Q 018211 153 TTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (359)
Q Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~ 231 (359)
.+.... ...........+++++++|||||||.||++.++|.++..........+++.++|++++..|++|..++.. .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~ 227 (521)
T PRK06187 149 EELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL-PY 227 (521)
T ss_pred HHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH-HH
Confidence 111111 1111123445678999999999999999999999999998888888889999999999999999998865 44
Q ss_pred HhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEec
Q 018211 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (359)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 311 (359)
.++..|+++++++.+++..+++. ++++++|.+.++|++++.+.+.... ...+++++|.+++|
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~----------l~~~~~t~l~~~p~~~~~l~~~~~~--------~~~~~~~l~~v~~~ 289 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDL----------IETERVTFFFAVPTIWQMLLKAPRA--------YFVDFSSLRLVIYG 289 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHH----------HHHhCCeEEEchHHHHHHHHcCcCC--------CccCcchhhEEEEc
Confidence 58999999999998899999988 8889999999999999999876432 22457899999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 312 SSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 312 G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
|+++++++.+.|.+.+++++++.||+||+|+++....
T Consensus 290 Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~ 326 (521)
T PRK06187 290 GAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLP 326 (521)
T ss_pred CcCCCHHHHHHHHHHhCcchheeeccCccCcccccCC
Confidence 9999999999999988999999999999998766554
No 43
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=7e-40 Score=317.86 Aligned_cols=306 Identities=31% Similarity=0.474 Sum_probs=254.0
Q ss_pred hHHHHHHHcCCCCCCceEEee-CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
++.+.+..++ .+|+++|+.+ +++.+||.||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 4 ~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~-----------------~g~~~gd~v~i~~~~~~e 65 (504)
T PRK07514 4 NLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVA-----------------LGVKPGDRVAVQVEKSPE 65 (504)
T ss_pred cHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 5788999999 9999999987 67899999999999999999999 799999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCc-eeccCCCCCCCCcccccc-c
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFD-Q 158 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 158 (359)
++++++|++++|++++|+++..+.+++..+++.+++++++++....+.+.......... ...+..... ........ .
T Consensus 66 ~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 144 (504)
T PRK07514 66 ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGT-GSLLEAAAAA 144 (504)
T ss_pred HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCc-ccHHHhhhhc
Confidence 99999999999999999999999999999999999999999987766665554333222 222211100 00000000 0
Q ss_pred chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCc
Q 018211 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (359)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~ 238 (359)
..........++++++|+|||||||.||+|.++|.++...+......++..++|++++.+|++|..++...++.+++.|+
T Consensus 145 ~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 224 (504)
T PRK07514 145 PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGA 224 (504)
T ss_pred CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCc
Confidence 01111233456899999999999999999999999999998888888889999999999999999998878889999999
Q ss_pred EEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHH
Q 018211 239 TVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (359)
Q Consensus 239 ~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~ 318 (359)
++++.+.+++..+++. + .++|++..+|.++..++.... .....++++|.+++||++++++
T Consensus 225 ~~~~~~~~~~~~~~~~----------i--~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gg~~~~~~ 284 (504)
T PRK07514 225 SMIFLPKFDPDAVLAL----------M--PRATVMMGVPTFYTRLLQEPR--------LTREAAAHMRLFISGSAPLLAE 284 (504)
T ss_pred EEEECCCCCHHHHHHH----------H--HhheeeecHHHHHHHHHcCCC--------CCcccccceeeEEecCCCCCHH
Confidence 9999999999999888 5 379999999999999886522 1224567899999999999999
Q ss_pred HHHHHHHHhCCcccccccCCcCcccccc
Q 018211 319 VMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 319 ~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
+.+.|.+.++.++++.||+||++.....
T Consensus 285 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 312 (504)
T PRK07514 285 THREFQERTGHAILERYGMTETNMNTSN 312 (504)
T ss_pred HHHHHHHHhCCcceeecccccccccccC
Confidence 9999999999999999999999865543
No 44
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-40 Score=318.30 Aligned_cols=305 Identities=18% Similarity=0.285 Sum_probs=252.3
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
||+.+.|.++++.+|+++|+.++++.+||.||.++++++|..|.+ .|+++|++|+++++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~-----------------~g~~~~~~v~i~~~~~~~ 64 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHA-----------------RGIGQGDVVALLMKNSAA 64 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 789999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCccccccc-c
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQ-S 159 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 159 (359)
++++++|++++|++++|+++..+.+++.++++.+++++++++.+....... ......++.... ......... .
T Consensus 65 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~ 138 (497)
T PRK06145 65 FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-----ETPKIVIDAAAQ-ADSRRLAQGGL 138 (497)
T ss_pred HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-----ccceEEecCccc-chhHHHhccCC
Confidence 999999999999999999999999999999999999999998765433211 011111111000 000000000 0
Q ss_pred hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcE
Q 018211 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~ 239 (359)
.........++++++++|||||||.||+|.++|.++..........++...+|+++...|++|.+++....+.++..|++
T Consensus 139 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~ 218 (497)
T PRK06145 139 EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGT 218 (497)
T ss_pred CCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCE
Confidence 01112234668999999999999999999999999987766666777889999999999999999987667788999999
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++.+.+++..+++. ++++++|++.++|+++..++.... ....+++++|.+++||+++++++
T Consensus 219 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~ll~~~~--------~~~~~~~~l~~~~~gG~~~~~~~ 280 (497)
T PRK06145 219 LRIHREFDPEAVLAA----------IERHRLTCAWMAPVMLSRVLTVPD--------RDRFDLDSLAWCIGGGEKTPESR 280 (497)
T ss_pred EEECCcCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHcCCC--------ccccccccceEEEecCCCCCHHH
Confidence 999999999999998 888999999999999999887522 12245678999999999999999
Q ss_pred HHHHHHHh-CCcccccccCCcCcccccc
Q 018211 320 MQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
.++|.+.+ +.++++.||+||+++..+.
T Consensus 281 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 308 (497)
T PRK06145 281 IRDFTRVFTRARYIDAYGLTETCSGDTL 308 (497)
T ss_pred HHHHHHHcCCCceEEeecCcccCCccee
Confidence 99999988 6899999999999985443
No 45
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=9.5e-40 Score=319.47 Aligned_cols=311 Identities=22% Similarity=0.281 Sum_probs=253.1
Q ss_pred hHHHHHHHcCCCCCCceEEee------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc
Q 018211 2 EVFKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~ 75 (359)
++.+.+.+.++.+|+++|++. .++.+||.||.++++++|..|.+ .|+++|++|++++
T Consensus 23 ~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~ 85 (538)
T TIGR03208 23 TINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-----------------LGVGRGDVVSFQL 85 (538)
T ss_pred cHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEC
Confidence 677889999999999999985 24689999999999999999998 6999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH-----HHHHHHhhhcCC--ceeccCCCCC
Q 018211 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSGA--KFSLIPPVPN 148 (359)
Q Consensus 76 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~ 148 (359)
+|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.... ............ ..+.... ..
T Consensus 86 ~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 164 (538)
T TIGR03208 86 PNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDG-DG 164 (538)
T ss_pred CCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecC-CC
Confidence 999999999999999999999999999999999999999999999987542 122222221111 1112111 11
Q ss_pred CCCcccccc-----cchh----hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecC
Q 018211 149 VSSETTVFD-----QSQA----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLP 219 (359)
Q Consensus 149 ~~~~~~~~~-----~~~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 219 (359)
......... .... .......++++++|+|||||||.||+|.++|.++...+......++...+|++++.+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p 244 (538)
T TIGR03208 165 DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASP 244 (538)
T ss_pred CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCC
Confidence 000000000 0000 1112345689999999999999999999999999999888888888899999999999
Q ss_pred chhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHH
Q 018211 220 LHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (359)
Q Consensus 220 l~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 299 (359)
++|..++...++.+++.|+++++.+.+++..+++. ++++++|++.++|.++..+..... ...
T Consensus 245 l~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~--------~~~ 306 (538)
T TIGR03208 245 MAHQTGFMYGLMMPLILNATAVLQDIWNPARAAEL----------IRETGVTFTMASTPFLTDLCRAVK--------ESG 306 (538)
T ss_pred chhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHH----------HHHhCCeEEecCHHHHHHHHhchh--------ccC
Confidence 99999988888999999999999999999999999 888999999999999998876421 112
Q ss_pred hhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 300 ~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
.+++++|.+++||+++++++.+++.+.+|+++++.||+||++++....+
T Consensus 307 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 355 (538)
T TIGR03208 307 APVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEP 355 (538)
T ss_pred CCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCc
Confidence 3568899999999999999999999989999999999999988766544
No 46
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=6.5e-40 Score=320.68 Aligned_cols=309 Identities=22% Similarity=0.290 Sum_probs=253.0
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.|.+.++.+|+++|+++.++.+||.||.+++.++|..|.+ .|+++|++|+++++|+++
T Consensus 21 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~-----------------~gi~~g~~V~v~~~n~~~ 83 (542)
T PRK06155 21 RTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAA-----------------AGVKRGDRVALMCGNRIE 83 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChH
Confidence 367899999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhc-C-CceeccCCCCCCC--C-c--c
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKS-G-AKFSLIPPVPNVS--S-E--T 153 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~--~-~--~ 153 (359)
++++++||+++|++++|+++.++.+++..+++++++++++++.+....+....... . .....++...... . . .
T Consensus 84 ~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (542)
T PRK06155 84 FLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTA 163 (542)
T ss_pred HHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchh
Confidence 99999999999999999999999999999999999999999987776665543322 1 1122222111000 0 0 0
Q ss_pred cccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHh
Q 018211 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~ 233 (359)
...............++++++|+|||||||.||+|.++|.++..........+++.+++++++..|++|..++. .++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~-~~~~~ 242 (542)
T PRK06155 164 PLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN-AFFQA 242 (542)
T ss_pred hhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH-HHHHH
Confidence 00000000112234568999999999999999999999999998877777888899999999999999999986 57889
Q ss_pred hhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCC
Q 018211 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (359)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~ 313 (359)
+..|+++++.+.+++..++.. ++++++|++.++|+++..+.+.... .....+++|.++.||
T Consensus 243 l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~~~l~~~~~g~- 303 (542)
T PRK06155 243 LLAGATYVLEPRFSASGFWPA----------VRRHGATVTYLLGAMVSILLSQPAR--------ESDRAHRVRVALGPG- 303 (542)
T ss_pred HHcCceEEeeCCCCHHHHHHH----------HHHhCCcEEEchHHHHHHHHcCcCc--------cccccCceEEEEEcC-
Confidence 999999999999999999999 8889999999999999988775321 123456788877655
Q ss_pred CCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 314 ALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 314 ~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++++.+.|.+.+|+++++.||+||+++++...
T Consensus 304 -~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~ 336 (542)
T PRK06155 304 -VPAALHAAFRERFGVDLLDGYGSTETNFVIAVT 336 (542)
T ss_pred -CCHHHHHHHHHHcCCCEEeeecccccCccccCC
Confidence 678999999998999999999999999876654
No 47
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=9e-40 Score=325.23 Aligned_cols=308 Identities=19% Similarity=0.224 Sum_probs=240.0
Q ss_pred HHHHHHcCCCCCCceEEee------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC
Q 018211 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (359)
Q Consensus 4 ~~~l~~~a~~~p~~~ai~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n 77 (359)
.+.|.++++.+|+++|+++ ..+++||+||.++++++|..|.+ +|+++||+|+++++|
T Consensus 56 ~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 118 (629)
T PRK10524 56 HNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-----------------LGVQRGDRVLIYMPM 118 (629)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 4566677888999999986 23689999999999999999999 799999999999999
Q ss_pred CHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc---------HHHHHHHhhhc---CCceeccCC
Q 018211 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (359)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (359)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.+..... ....+.+..
T Consensus 119 ~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 198 (629)
T PRK10524 119 IAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDR 198 (629)
T ss_pred CHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999987532 23333322211 112222221
Q ss_pred CCC-CC-------Ccccccccch--hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHH-HHHHhhccCCCceE
Q 018211 146 VPN-VS-------SETTVFDQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ-MLTEAWEYTSADQF 214 (359)
Q Consensus 146 ~~~-~~-------~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~d~~ 214 (359)
... .. .......... ........++++++|+|||||||.||||+++|.+++.... .....++..++|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~ 278 (629)
T PRK10524 199 GLAPMARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETF 278 (629)
T ss_pred CCCCcCcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEE
Confidence 100 00 0000000000 0011123568999999999999999999999999765443 34455678899999
Q ss_pred EEecCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh
Q 018211 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (359)
Q Consensus 215 l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 290 (359)
++..|+.|..+..+.++.++..|+++++.+. +++..+++. ++++++|++.++|++++.+.+....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~- 347 (629)
T PRK10524 279 FCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRI----------VEKYKVNRMFSAPTAIRVLKKQDPA- 347 (629)
T ss_pred EEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHH----------HHHcCceEEEeCHHHHHHHHhcCcc-
Confidence 9999999998877778999999999998763 467888888 8899999999999999988764211
Q ss_pred hHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccc
Q 018211 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKG 344 (359)
Q Consensus 291 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~ 344 (359)
.....++++||.+++||+++++++.+++.+.+++++++.||+||+|+.+
T Consensus 348 -----~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~ 396 (629)
T PRK10524 348 -----LLRKHDLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPI 396 (629)
T ss_pred -----cccccChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchh
Confidence 1123467899999999999999999999998999999999999998543
No 48
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-39 Score=318.52 Aligned_cols=312 Identities=22% Similarity=0.297 Sum_probs=253.0
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
||+.+.+.+.++.+|+++|+.+.++.+||.||.++++++|..|.+ .|+++|++|+++++|+++
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~~~~~ 79 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSR-----------------RGVGFGDRVLILMLNRTE 79 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 689999999999999999999999999999999999999999998 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-c-eeccCCC--CCCCCccccc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-K-FSLIPPV--PNVSSETTVF 156 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~ 156 (359)
++++++||+++|++++|+++..+.+++..+++++++++++++....+.+.......+. . .+.+... .......+..
T Consensus 80 ~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (542)
T PRK07786 80 FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLL 159 (542)
T ss_pred HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHh
Confidence 9999999999999999999999999999999999999999998766655444322221 1 1111110 0000011110
Q ss_pred -ccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhcc-CCCceEEEecCchhhHHHHHHHHHhh
Q 018211 157 -DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEY-TSADQFLHCLPLHHVHGLFNALLAPL 234 (359)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~~~~~~~~~~l 234 (359)
.............+++++++|||||||.||+|.++|+++...+......++. ..++++++..|++|.+|+ ..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l 238 (542)
T PRK07786 160 AEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGI-GSMLPGL 238 (542)
T ss_pred hccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHH-HHHHHHH
Confidence 0001111223345789999999999999999999999999888777777776 578999999999999998 4688899
Q ss_pred hcCcEEEEcC--CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecC
Q 018211 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (359)
Q Consensus 235 ~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 312 (359)
..|+++++.+ .+++..+++. ++++++|.+.++|+++..+........ ...++|.+++||
T Consensus 239 ~~G~~~v~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~~~~---------~~~~lr~i~~gg 299 (542)
T PRK07786 239 LLGAPTVIYPLGAFDPGQLLDV----------LEAEKVTGIFLVPAQWQAVCAEQQARP---------RDLALRVLSWGA 299 (542)
T ss_pred HccCEEEEccCCCcCHHHHHHH----------HHHcCCeEEEehHHHHHHHHhCcccCc---------cCcceEEEEECC
Confidence 9999999875 5789999998 888999999999999999987632111 113699999999
Q ss_pred CCCCHHHHHHHHHHh-CCcccccccCCcCccccccccc
Q 018211 313 SALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRHCWQ 349 (359)
Q Consensus 313 ~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~~~~ 349 (359)
+++++++.+.+.+.+ +.++++.||+||++++.+....
T Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~ 337 (542)
T PRK07786 300 APASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLG 337 (542)
T ss_pred CCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCc
Confidence 999999999999988 8999999999999987665443
No 49
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-40 Score=319.16 Aligned_cols=312 Identities=23% Similarity=0.267 Sum_probs=248.2
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC--ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
++.+.|.+.++.+|+++|+++.+ +.+||+||.++++++|+.|.+ .|+++||+|+++++|++
T Consensus 17 ~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~gd~V~i~~~n~~ 79 (534)
T PRK05852 17 RIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTR-----------------SGLLPGDRVALRMGSNA 79 (534)
T ss_pred cHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCcH
Confidence 57789999999999999998743 579999999999999999999 79999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHH-hhhcCCceeccCCC-C-CCC---Ccc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNV-ASKSGAKFSLIPPV-P-NVS---SET 153 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~-~-~~~---~~~ 153 (359)
++++++|||+++|++++++++.++.+++.+++++++++.+|++.......... ....+......... . ... ...
T Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (534)
T PRK05852 80 EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLD 159 (534)
T ss_pred HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccc
Confidence 99999999999999999999999999999999999999999876432211110 00001111110000 0 000 000
Q ss_pred cccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHh
Q 018211 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~ 233 (359)
................++.++|+|||||||.||||.++|.++...+......+++..+|++++..|++|..++...++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 239 (534)
T PRK05852 160 AATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLAT 239 (534)
T ss_pred cccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHH
Confidence 00000000011112246789999999999999999999999999888888888899999999999999999998888999
Q ss_pred hhcCcEEEEcC--CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEec
Q 018211 234 LYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (359)
Q Consensus 234 l~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 311 (359)
++.|+++++++ .+++..+++. ++++++|++.++|.++..+.+..... ....+.+++|.+.++
T Consensus 240 l~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~~ 303 (534)
T PRK05852 240 LASGGAVLLPARGRFSAHTFWDD----------IKAVGATWYTAVPTIHQILLERAATE------PSGRKPAALRFIRSC 303 (534)
T ss_pred HhcCCeEEeCCCcCcCHHHHHHH----------HHHcCCcEEEcChHHHHHHHhhcccc------cccccCCCeeEEEEC
Confidence 99999999865 4788899998 88899999999999999998763211 012346789999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 312 SSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 312 G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
|+++++++.+.|.+.+|.++++.||+||++..++.
T Consensus 304 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 338 (534)
T PRK05852 304 SAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTT 338 (534)
T ss_pred CCCCCHHHHHHHHHHhCCChhhccCccccchhhhc
Confidence 99999999999999999999999999999976654
No 50
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1e-39 Score=317.44 Aligned_cols=305 Identities=24% Similarity=0.370 Sum_probs=252.1
Q ss_pred HHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHH
Q 018211 3 VFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (359)
Q Consensus 3 i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~ 82 (359)
+.+.|.+.++.+|+++|+.+.++++||+||.+++.++|..|.+ .|+++|++|+++++|+++++
T Consensus 2 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~-----------------~g~~~~~~V~i~~~n~~~~~ 64 (515)
T TIGR03098 2 LHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRG-----------------LGLARGERVAIYLDKRLETV 64 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHHHH
Confidence 6788999999999999999999999999999999999999998 69999999999999999999
Q ss_pred HHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC--ceeccCCCCC-------CCCcc
Q 018211 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPN-------VSSET 153 (359)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~ 153 (359)
++++||+++|++++|+++.++.+++..+++++++++++++.+....+......... ..+.+..... .....
T Consensus 65 ~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (515)
T TIGR03098 65 TAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWP 144 (515)
T ss_pred HHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHH
Confidence 99999999999999999999999999999999999999988766555443332211 1112211110 00111
Q ss_pred cccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHh
Q 018211 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~ 233 (359)
................+++++|+|||||||.||+|.+||.++...+......++...+|++++.+|++|..++. .++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~ 223 (515)
T TIGR03098 145 KLLALGDADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFN-QLTTA 223 (515)
T ss_pred HhhccccccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHH-HHHHH
Confidence 11111111112233457899999999999999999999999999888888888888999999999999999985 68899
Q ss_pred hhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCC
Q 018211 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (359)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~ 313 (359)
+..|+++++.+.++++.+++. ++++++|++.++|+++..+.+... ...+++++|.+++||+
T Consensus 224 l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~---------~~~~~~~l~~~~~~g~ 284 (515)
T TIGR03098 224 FYVGATVVLHDYLLPRDVLKA----------LEKHGITGLAAVPPLWAQLAQLDW---------PESAAPSLRYLTNSGG 284 (515)
T ss_pred HHcCCEEEEcCCCCHHHHHHH----------HHHcCCceEecChHHHHHHHhccc---------CCCCccceEEEEecCC
Confidence 999999999999999999998 888999999999999999876411 1135678999999999
Q ss_pred CCCHHHHHHHHHHh-CCcccccccCCcCcccc
Q 018211 314 ALPLPVMQQWETIT-GHRLLERYGMTEGCTKG 344 (359)
Q Consensus 314 ~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~ 344 (359)
++++++.+.+++.+ +..+++.||+||++.+.
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 316 (515)
T TIGR03098 285 AMPRATLSRLRSFLPNARLFLMYGLTEAFRST 316 (515)
T ss_pred cCCHHHHHHHHHHCCCCeEeeeeccccccceE
Confidence 99999999999988 78999999999998644
No 51
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-39 Score=315.46 Aligned_cols=298 Identities=20% Similarity=0.251 Sum_probs=246.7
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
|++.+.|.++++.+|+++|+.+.+.++||.||.++++++|+.|.+ .| .+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~~-~~~~~v~i~~~~~~~ 62 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNE-----------------KE-SKNKTIAILLENRIE 62 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHH-----------------hC-CCCCEEEEEcCCCHH
Confidence 889999999999999999999999999999999999999999998 56 489999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccch
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (359)
+++++|||+++|++++|+++.++.+++.++++.+++++++++......+... ......+...... ......
T Consensus 63 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~ 133 (487)
T PRK07638 63 FLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE----EGRVIEIDEWKRM-----IEKYLP 133 (487)
T ss_pred HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc----cceEEEehhhhhh-----hhhccc
Confidence 9999999999999999999999999999999999999999987654433211 1111111110000 000000
Q ss_pred hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEE
Q 018211 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i 240 (359)
.........+++++|+|||||||.||||.++|.+++..+......+++..+|+++...|++|..++ ..++.+++.|+++
T Consensus 134 ~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~ 212 (487)
T PRK07638 134 TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTV 212 (487)
T ss_pred cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEE
Confidence 111112234678999999999999999999999999988888888889999999999999999877 4688899999999
Q ss_pred EEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHH
Q 018211 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (359)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~ 320 (359)
++.+.+++..+++. ++++++|++.++|+++..+.+... ...+.+.++++|++++.++.
T Consensus 213 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~------------~~~~~~~~~~~G~~l~~~~~ 270 (487)
T PRK07638 213 HLMRKFIPNQVLDK----------LETENISVMYTVPTMLESLYKENR------------VIENKMKIISSGAKWEAEAK 270 (487)
T ss_pred EEcCCCCHHHHHHH----------HHHcCCeEEEeCcHHHHHHHhCcC------------cCCceeEEEEcCCCCCHHHH
Confidence 99999999999999 889999999999999999987511 12355667889999999999
Q ss_pred HHHHHHh-CCcccccccCCcCcccccccc
Q 018211 321 QQWETIT-GHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 321 ~~~~~~~-~~~v~~~YG~TE~g~~~~~~~ 348 (359)
+++.+.+ +.++++.||+||++.++....
T Consensus 271 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 299 (487)
T PRK07638 271 EKIKNIFPYAKLYEFYGASELSFVTALVD 299 (487)
T ss_pred HHHHHHcCCCeEEEEecCCccCceEEecc
Confidence 9999998 789999999999997655443
No 52
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=6.8e-40 Score=321.47 Aligned_cols=303 Identities=20% Similarity=0.280 Sum_probs=237.8
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCc----------cccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCe
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQK----------SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGAR 70 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~----------~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~ 70 (359)
+|+.+.|.+.++.+|+++|+++.+. ++||+||.++++++|..|.+ .|+++||+
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-----------------~g~~~gd~ 68 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-----------------AGIGRGMR 68 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCE
Confidence 5788899999999999999998543 89999999999999999999 79999999
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc--cHHHHHHHhhhcCCceeccCCC--
Q 018211 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED--YREVLQNVASKSGAKFSLIPPV-- 146 (359)
Q Consensus 71 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 146 (359)
|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++.+ ....+...........+.+...
T Consensus 69 V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 148 (552)
T PRK09274 69 AVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLL 148 (552)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccc
Confidence 999999999999999999999999999999999999999999999999998752 1121111100000011111110
Q ss_pred CCCCCccccccc--chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhH
Q 018211 147 PNVSSETTVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (359)
Q Consensus 147 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 224 (359)
............ ..........++++++|+|||||||.||+|.++|+++...+......+++.++|+.++..|++|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 228 (552)
T PRK09274 149 WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALF 228 (552)
T ss_pred cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhh
Confidence 000001111100 001112234568999999999999999999999999999988888888999999999999998754
Q ss_pred HHHHHHHHhhhcCcEEEEcC-------CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHH
Q 018211 225 GLFNALLAPLYAGATVEFMP-------KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (359)
Q Consensus 225 ~~~~~~~~~l~~G~~i~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (359)
++ ..|+++++.+ .+++..+++. ++++++|+++++|++++.+.+... .
T Consensus 229 ~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~--------~ 282 (552)
T PRK09274 229 GP--------ALGMTSVIPDMDPTRPATVDPAKLFAA----------IERYGVTNLFGSPALLERLGRYGE--------A 282 (552)
T ss_pred hh--------hhCCeEEecCcccccccccCHHHHHHH----------HHHcCCeEEeccHHHHHHHHHHhh--------h
Confidence 43 3577777764 4678889988 889999999999999999987521 1
Q ss_pred HHhhhccceEEEecCCCCCHHHHHHHHHHh--CCcccccccCCcCcccccc
Q 018211 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 298 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v~~~YG~TE~g~~~~~ 346 (359)
...++++||.+++||+++++++.++|.+.+ |+++++.||+||+++++..
T Consensus 283 ~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~ 333 (552)
T PRK09274 283 NGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSI 333 (552)
T ss_pred cCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEee
Confidence 234688999999999999999999999998 5799999999999876543
No 53
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.4e-39 Score=317.19 Aligned_cols=310 Identities=22% Similarity=0.346 Sum_probs=250.1
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC-ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
++.+.|.+.++.+|+++|+.+++ +.+||+||.++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 24 ~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~-----------------~G~~~gd~V~i~~~n~~~ 86 (547)
T PRK06087 24 SLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLA-----------------KGIEPGDRVAFQLPGWCE 86 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 57788999999999999999865 799999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc-----HHHHHHHhhhcCC--ceeccCCCCCCC---
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA--KFSLIPPVPNVS--- 150 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~--- 150 (359)
++++++||+++|++++|+++..+.+++.++++.+++++++++... .+.+......... ....+.......
T Consensus 87 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (547)
T PRK06087 87 FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSL 166 (547)
T ss_pred HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCcc
Confidence 999999999999999999999999999999999999999997532 2333333222221 122221111000
Q ss_pred Cccccccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHH
Q 018211 151 SETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNA 229 (359)
Q Consensus 151 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~ 229 (359)
........ ...........+++++|+|||||||.||+|.++|.++......+...+++.++|++++..|++|.++++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 246 (547)
T PRK06087 167 SLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHG 246 (547)
T ss_pred CHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHH
Confidence 00000000 00011223456899999999999999999999999999888887888889999999999999999998888
Q ss_pred HHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEE
Q 018211 230 LLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (359)
Q Consensus 230 ~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~ 309 (359)
++.++..|+++++.+.+++..+++. ++++++|++..+|.++..+++... ....+++++|.++
T Consensus 247 ~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~--------~~~~~~~~lr~i~ 308 (547)
T PRK06087 247 VTAPFLIGARSVLLDIFTPDACLAL----------LEQQRCTCMLGATPFIYDLLNLLE--------KQPADLSALRFFL 308 (547)
T ss_pred HHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCCEEeccHHHHHHHHhccc--------cCCCCCCCeEEEE
Confidence 8999999999999999999999998 788999999988877777766422 1224578999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 310 CGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 310 ~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+||+++++++.+.+.+. |+++++.||+||++++....
T Consensus 309 ~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~ 345 (547)
T PRK06087 309 CGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVN 345 (547)
T ss_pred EcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccC
Confidence 99999999999988764 99999999999999776543
No 54
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-39 Score=318.06 Aligned_cols=312 Identities=20% Similarity=0.291 Sum_probs=246.7
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
|+.+.|.+.++.+|+++|++++++.+||+||.++++++|..|.+. .|+++||+|+++++|++++
T Consensus 25 ~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~----------------~gi~~gd~Vai~~~n~~~~ 88 (562)
T PRK05677 25 NIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQH----------------TDLKPGDRIAVQLPNVLQY 88 (562)
T ss_pred cHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 678899999999999999999889999999999999999999862 4999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCC----------
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSS---------- 151 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 151 (359)
++++||++++|++++|+++.++.+++.+++++++++++|++.+....+.+.......+..++........
T Consensus 89 ~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
T PRK05677 89 PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAV 168 (562)
T ss_pred HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccc
Confidence 9999999999999999999999999999999999999999877665555443322222222111000000
Q ss_pred ------------------cccccccch--hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc--cC
Q 018211 152 ------------------ETTVFDQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YT 209 (359)
Q Consensus 152 ------------------~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~ 209 (359)
..+...... ........++++++|+|||||||.||||.++|+++..++......++ ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 248 (562)
T PRK05677 169 VKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLN 248 (562)
T ss_pred hhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCC
Confidence 000000000 00112235689999999999999999999999999887665555443 33
Q ss_pred -CCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhh
Q 018211 210 -SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (359)
Q Consensus 210 -~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 287 (359)
..+.+++.+|++|..++...++..+..|++.++.+ .+++..+++. ++++++|++.++|.++..+....
T Consensus 249 ~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 318 (562)
T PRK05677 249 EGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKE----------LGKWKFSGFVGLNTLFVALCNNE 318 (562)
T ss_pred CCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHH----------HHHcCceEEecHHHHHHHHHhCc
Confidence 34788999999999998767777888888877665 4688888888 88999999999999999887652
Q ss_pred hhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
. ....+++++|.+++||+++++++.+.|.+.+|+++++.||+||+++++...
T Consensus 319 ~--------~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~ 370 (562)
T PRK05677 319 A--------FRKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVN 370 (562)
T ss_pred c--------cccCChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceeec
Confidence 1 112346789999999999999999999998899999999999998766544
No 55
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-39 Score=317.85 Aligned_cols=306 Identities=19% Similarity=0.256 Sum_probs=236.4
Q ss_pred hHHHHHHHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
++.+.|.+.|+.+|+++|+++ +++.+||+||.++++++|+.|.+ .|+++|++|+++++|++
T Consensus 15 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~~~~ 77 (540)
T PRK05857 15 TVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRA-----------------QSVSRGSRVLVISDNGP 77 (540)
T ss_pred chHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-----------------hCcCCCCEEEEEcCCCH
Confidence 578899999999999999985 34689999999999999999999 79999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhc-CCceeccCCCCCCCCccccccc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKS-GAKFSLIPPVPNVSSETTVFDQ 158 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 158 (359)
++++++|||+++|++++|+++.++.+++.++++.++++.++++.........+.+.. ....+.++..............
T Consensus 78 e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (540)
T PRK05857 78 ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDA 157 (540)
T ss_pred HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccc
Confidence 999999999999999999999999999999999999999999876432222111111 1111111111000000000000
Q ss_pred chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH----hhccCCCceEEEecCchhhHHHHHHHHHhh
Q 018211 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLAPL 234 (359)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l 234 (359)
..........++++++++|||||||.||||.++|+++..+...... .+....+++.+..+|++|..+++ .++.++
T Consensus 158 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l 236 (540)
T PRK05857 158 ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCL 236 (540)
T ss_pred cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHh
Confidence 0001122345689999999999999999999999999876544322 23455688999999999999986 477889
Q ss_pred hcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCC
Q 018211 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (359)
Q Consensus 235 ~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~ 314 (359)
+.|+++++. ..++..+++. ++++++|++..+|+++..+.+.... ...+++++|.+++||++
T Consensus 237 ~~G~~~v~~-~~~~~~~~~~----------i~~~~it~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG~~ 297 (540)
T PRK05857 237 MHGGLCVTG-GENTTSLLEI----------LTTNAVATTCLVPTLLSKLVSELKS--------ANATVPSLRLVGYGGSR 297 (540)
T ss_pred hcceeEEec-CCChhHHHHH----------HHhcCcceEEeChHHHHHHHhcccc--------CCCcCccceEEEEcCcc
Confidence 999998764 4678888888 8999999999999999999875321 12457899999999999
Q ss_pred CCHHHHHHHHHHhCCcccccccCCcCccccc
Q 018211 315 LPLPVMQQWETITGHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 315 l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~ 345 (359)
++....+ +.+.+|+++++.||+||++....
T Consensus 298 ~~~~~~~-~~~~~g~~i~~~YG~TE~~~~~~ 327 (540)
T PRK05857 298 AIAADVR-FIEATGVRTAQVYGLSETGCTAL 327 (540)
T ss_pred CCchhHH-HHHHhCCeeecccCCCcCCceee
Confidence 9988875 55567999999999999986543
No 56
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.1e-39 Score=348.81 Aligned_cols=301 Identities=20% Similarity=0.309 Sum_probs=251.0
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.+.++.+|+++|+++.++.+||+||.++++++|..|.+ .|+++|++|+++++|++++
T Consensus 459 ~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~-----------------~g~~~g~~V~l~~~~~~~~ 521 (1296)
T PRK10252 459 TLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRE-----------------RGVKPGDSVAVALPRSVFL 521 (1296)
T ss_pred CHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 57788999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchh
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
+++++||+++|++++|+++.++.+++.++++++++++++++......+.... .......... ......
T Consensus 522 i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~ 589 (1296)
T PRK10252 522 TLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVP---DLTSLCYNAP---------LAPQGA 589 (1296)
T ss_pred HHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCC---Cceeeecccc---------cccccC
Confidence 9999999999999999999999999999999999999999876544432210 0001100000 000011
Q ss_pred hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEE
Q 018211 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~ 241 (359)
.......++++++|+|||||||.||||+++|+++.+.+......++++++|++++..|++|..+++ .++.+|+.|++++
T Consensus 590 ~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~ 668 (1296)
T PRK10252 590 APLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVW-EFFWPFIAGAKLV 668 (1296)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHH-HHHHHHhCCCEEE
Confidence 111223568999999999999999999999999999999988999999999999999999999985 6889999999999
Q ss_pred EcC---CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHH
Q 018211 242 FMP---KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (359)
Q Consensus 242 ~~~---~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~ 318 (359)
+.+ ..++..+++. ++++++|++.++|+++..+++..... .....++++|.+++||++++++
T Consensus 669 ~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~Ps~l~~l~~~~~~~------~~~~~~~~lr~i~~gGe~l~~~ 732 (1296)
T PRK10252 669 MAEPEAHRDPLAMQQF----------FAEYGVTTTHFVPSMLAAFVASLTPE------GARQSCASLRQVFCSGEALPAD 732 (1296)
T ss_pred ECChhccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhhhccc------cccccCCCccEEEEecCCCCHH
Confidence 986 3578888888 88899999999999999887652111 0112457899999999999999
Q ss_pred HHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 319 VMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 319 ~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
+.+.|.+.+|++++|.||+||++..++...
T Consensus 733 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 762 (1296)
T PRK10252 733 LCREWQQLTGAPLHNLYGPTEAAVDVSWYP 762 (1296)
T ss_pred HHHHHHhcCCCEEEeCCCcchhhheeeeee
Confidence 999999888999999999999987666543
No 57
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-39 Score=326.93 Aligned_cols=294 Identities=20% Similarity=0.234 Sum_probs=239.6
Q ss_pred hHHHHHHHcCCC--CCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSM--ARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~--~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
|+.+.|.++++. +|+++|+++. ..+||+||.++++++|..|.+ +|+++||+|+++++|++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~-----------------~g~~~g~~V~i~~~~~~ 66 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRN-----------------RGLSSGDRVLLCLPDSP 66 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCH
Confidence 577888888875 7999999874 589999999999999999999 69999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS 159 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (359)
+++++++||+++|++++|+++.++.+++.+++++++++++|++......+... ....... .... ... .
T Consensus 67 ~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~---~~~~--~~~-~ 134 (705)
T PRK06060 67 DLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS------RVAEAAE---LMSE--AAR-V 134 (705)
T ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc------ccchhhh---hhhh--ccc-c
Confidence 99999999999999999999999999999999999999999987544332110 0000000 0000 000 0
Q ss_pred hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHH-HhhccCCCceEEEecCchhhHHHHHHHHHhhhcCc
Q 018211 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~ 238 (359)
.........++++++|+|||||||.||||.++|.++...+.... ..+++.+.|++++..|++|..++...++.++..|+
T Consensus 135 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~ 214 (705)
T PRK06060 135 APGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGG 214 (705)
T ss_pred CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCC
Confidence 00011123468899999999999999999999999988776654 45788899999999999999888667888999999
Q ss_pred EEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCH
Q 018211 239 TVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (359)
Q Consensus 239 ~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~ 317 (359)
++++.+ .+++..++.. +.++++|+++++|+++..+.+... ...+++||.+++||+++++
T Consensus 215 ~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~----------~~~~~slr~i~~gGe~l~~ 274 (705)
T PRK06060 215 SAVINSAPVTPEAAAIL----------SARFGPSVLYGVPNFFARVIDSCS----------PDSFRSLRCVVSAGEALEL 274 (705)
T ss_pred EEEEeCCCCCHHHHHHH----------HHhcCCeEEeeHHHHHHHHHHhcc----------cccccceeEEEEecCcCCH
Confidence 999987 4677777776 788999999999999998876421 2346789999999999999
Q ss_pred HHHHHHHHHh-CCcccccccCCcCccccc
Q 018211 318 PVMQQWETIT-GHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 318 ~~~~~~~~~~-~~~v~~~YG~TE~g~~~~ 345 (359)
++.++|.+.+ ++++++.||+||++..+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 303 (705)
T PRK06060 275 GLAERLMEFFGGIPILDGIGSTEVGQTFV 303 (705)
T ss_pred HHHHHHHHHcCCCceEeeeeccccCceEE
Confidence 9999999988 589999999999986543
No 58
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-39 Score=314.84 Aligned_cols=310 Identities=18% Similarity=0.245 Sum_probs=246.4
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
||+.+.+.+.++++|+++|+.++++++||.||.+++.++|..|.+ .|+++|++|+++++|+++
T Consensus 7 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~v~i~~~~~~~ 69 (528)
T PRK07470 7 MNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAA-----------------RGVRKGDRILVHSRNCNQ 69 (528)
T ss_pred CCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHH
Confidence 688999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC--ceeccCCCCCCCCccccccc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSETTVFDQ 158 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 158 (359)
++++++||+++|++++++++..+.+++.++++.++++.++++++..+.+......... ..+.+...............
T Consensus 70 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (528)
T PRK07470 70 MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVAR 149 (528)
T ss_pred HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhc
Confidence 9999999999999999999999999999999999999999998766555444332211 11111111000000101000
Q ss_pred c--hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh--ccCCCceEEEecCchhhHHHHHHHHHhh
Q 018211 159 S--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPL 234 (359)
Q Consensus 159 ~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~~~~~~~~~~l 234 (359)
. .........++++++|+|||||||.||+|.++|.++...+....... +....|+++..+|++|..++. .++ .+
T Consensus 150 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~ 227 (528)
T PRK07470 150 HLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QV 227 (528)
T ss_pred CCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HH
Confidence 0 00112234568999999999999999999999999976554433322 567889999999999999985 344 46
Q ss_pred hcCcEEEEcC--CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecC
Q 018211 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (359)
Q Consensus 235 ~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 312 (359)
+.|++.++.+ .++++.+++. ++++++|++.++|++++.+.+.... ...+++++|.+++||
T Consensus 228 ~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG 289 (528)
T PRK07470 228 ARGAATVLLPSERFDPAEVWAL----------VERHRVTNLFTVPTILKMLVEHPAV--------DRYDHSSLRYVIYAG 289 (528)
T ss_pred hcCceEEEecccCcCHHHHHHH----------HHhcCCeEEechHHHHHHHHhCcCc--------CCCCCcceEEEEEcC
Confidence 7777776665 5788888888 8899999999999999999875321 224578999999999
Q ss_pred CCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 313 SALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++++++.+++.+.+|.++++.||+||+++.++..
T Consensus 290 ~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~ 324 (528)
T PRK07470 290 APMYRADQKRALAKLGKVLVQYFGLGEVTGNITVL 324 (528)
T ss_pred CCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeec
Confidence 99999999999988999999999999998876543
No 59
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-39 Score=313.50 Aligned_cols=309 Identities=24% Similarity=0.284 Sum_probs=253.0
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
|+.+.|.++++++|+++|++++++.+||.||.+++++++..|.+ .|+++|++|+++++|++++
T Consensus 13 ~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~~~~V~i~~~~~~~~ 75 (524)
T PRK06188 13 TYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEA-----------------LGLGTGDAVALLSLNRPEV 75 (524)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHH
Confidence 67889999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc-cHHHHHHHhhhcCC-c-eeccCCCCCCCCcccc-cc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-YREVLQNVASKSGA-K-FSLIPPVPNVSSETTV-FD 157 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~ 157 (359)
+++++||+++|++++|+++..+.+++..+++.++++.++++.. ....+......... . ...+............ ..
T Consensus 76 ~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (524)
T PRK06188 76 LMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAK 155 (524)
T ss_pred HHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhc
Confidence 9999999999999999999999999999999999999999876 33333333222211 1 1111111110000000 00
Q ss_pred cchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcC
Q 018211 158 QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (359)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G 237 (359)
...........++++++|+|||||||.||+|.++|.++...+......++...+|++++..|++|..++. ++.++..|
T Consensus 156 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G 233 (524)
T PRK06188 156 FGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRG 233 (524)
T ss_pred cCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--HHHHHHcC
Confidence 0011111223456799999999999999999999999999988888888999999999999999998874 67889999
Q ss_pred cEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCH
Q 018211 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (359)
Q Consensus 238 ~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~ 317 (359)
+++++.+.+++..+++. ++++++|++.++|+++..+++... ....+++++|.+++||+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~--------~~~~~l~~lr~~~~gg~~~~~ 295 (524)
T PRK06188 234 GTVIVLAKFDPAEVLRA----------IEEQRITATFLVPTMIYALLDHPD--------LRTRDLSSLETVYYGASPMSP 295 (524)
T ss_pred CEEEEcCCCCHHHHHHH----------HHHhCCEEEEehHHHHHHHHhCcC--------ccCCCCcceeEEEEcCCCCCH
Confidence 99999999999999998 888999999999999999987632 122457899999999999999
Q ss_pred HHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 318 PVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 318 ~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+..+.+.+.+|..+++.||+||+++.++..
T Consensus 296 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 325 (524)
T PRK06188 296 VRLAEAIERFGPIFAQYYGQTEAPMVITYL 325 (524)
T ss_pred HHHHHHHHHhCchhhheeCccccCCceeec
Confidence 999999988999999999999997766554
No 60
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1e-38 Score=313.67 Aligned_cols=313 Identities=24% Similarity=0.281 Sum_probs=251.1
Q ss_pred ChHHHHHHHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC
Q 018211 1 MEVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~ 78 (359)
+++.+.|.+.++.+|+++|+.+ .++++||+||.++++++|..|.+ .|+++||+|+++++|+
T Consensus 16 ~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gi~~g~~V~i~~~~~ 78 (559)
T PRK08315 16 QTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLA-----------------LGIEKGDRVGIWAPNV 78 (559)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCC
Confidence 4688999999999999999987 56789999999999999999999 6999999999999999
Q ss_pred HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH-----HHHHHHhhhc-------------CC--
Q 018211 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKS-------------GA-- 138 (359)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-------------~~-- 138 (359)
+++++++|||+++|++++|+++..+.+++..+++++++++++++.... ..+.+..... +.
T Consensus 79 ~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (559)
T PRK08315 79 PEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELR 158 (559)
T ss_pred hHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCce
Confidence 999999999999999999999999999999999999999999986432 2222221111 00
Q ss_pred ceeccCCC--CCCCCccccccc-------chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccC
Q 018211 139 KFSLIPPV--PNVSSETTVFDQ-------SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (359)
Q Consensus 139 ~~~~~~~~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~ 209 (359)
........ ............ ..........++++++++|||||||.||+|.++|.++..++......+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 238 (559)
T PRK08315 159 RVIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLT 238 (559)
T ss_pred eEEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCC
Confidence 00111100 000000000000 000112233567899999999999999999999999999988888888999
Q ss_pred CCceEEEecCchhhHHHHHHHHHhhhcCcEEEE-cCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhh
Q 018211 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEF-MPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (359)
Q Consensus 210 ~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 288 (359)
++|+++...|++|..++...++.++..|+++++ ...+++..+++. ++++++|++.++|+++..++....
T Consensus 239 ~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~~~~~~~ 308 (559)
T PRK08315 239 EEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAA----------VEEERCTALYGVPTMFIAELDHPD 308 (559)
T ss_pred CCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHH----------HHHcCCeEEecchHHHHHHHhCcc
Confidence 999999999999999998888999999999994 456889999988 889999999999999988876522
Q ss_pred hhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCC-cccccccCCcCcccccccc
Q 018211 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~TE~g~~~~~~~ 348 (359)
....++++||.+++||++++.++.+++.+.++. ++++.||+||++.+++.+.
T Consensus 309 --------~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~ 361 (559)
T PRK08315 309 --------FARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTR 361 (559)
T ss_pred --------cCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecC
Confidence 122357889999999999999999999998875 4999999999998766544
No 61
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1e-38 Score=313.54 Aligned_cols=306 Identities=22% Similarity=0.313 Sum_probs=241.4
Q ss_pred HHHHHHHcCCCCCCceEEeeCC--ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 3 VFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 3 i~~~l~~~a~~~p~~~ai~~~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+.+.+... +.+|+++|+++.. ..+||+||.++++++|..|.++ .|+++||+|+++++|+++
T Consensus 42 ~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~----------------~G~~~gd~V~i~~~n~~~ 104 (560)
T PLN02574 42 AVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHV----------------MGVRQGDVVLLLLPNSVY 104 (560)
T ss_pred HHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCcch
Confidence 34455554 6789999999853 4799999999999999999973 499999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCC-------CCCcc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-------VSSET 153 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 153 (359)
+++++|||+++|++++|+++..+.+++.++++.+++++++++.+..+.+... ......+..... .....
T Consensus 105 ~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PLN02574 105 FPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL----GVPVIGVPENYDFDSKRIEFPKFY 180 (560)
T ss_pred HHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc----CCcEEecCcccccccCccCcccHH
Confidence 9999999999999999999999999999999999999999998765554331 111111111000 00000
Q ss_pred cccccc-hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH----hhcc-CCCceEEEecCchhhHHHH
Q 018211 154 TVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEY-TSADQFLHCLPLHHVHGLF 227 (359)
Q Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~-~~~d~~l~~~pl~h~~~~~ 227 (359)
...... .........++++++|+|||||||.||||.++|+++...+..+.. .+.. ..+++++..+|++|..++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 260 (560)
T PLN02574 181 ELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLS 260 (560)
T ss_pred HHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHH
Confidence 000000 111122345689999999999999999999999999987766543 2222 3568899999999999987
Q ss_pred HHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceE
Q 018211 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (359)
Q Consensus 228 ~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 307 (359)
..++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+.... ....+++++|.
T Consensus 261 ~~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~-------~~~~~~~~lr~ 323 (560)
T PLN02574 261 LFVVGLLSLGSTIVVMRRFDASDMVKV----------IDRFKVTHFPVVPPILMALTKKAKG-------VCGEVLKSLKQ 323 (560)
T ss_pred HHHHHHHhcCCEEEEecCCCHHHHHHH----------HHHcCCeEEecCCHHHHHHHhCccc-------cccCccccceE
Confidence 777788899999999999999999999 8899999999999999999876321 12346789999
Q ss_pred EEecCCCCCHHHHHHHHHHh-CCcccccccCCcCcccccc
Q 018211 308 MMCGSSALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 308 i~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
+++||+++++++.++|.+.+ ++++++.||+||++.+++.
T Consensus 324 ~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 363 (560)
T PLN02574 324 VSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTR 363 (560)
T ss_pred EEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeec
Confidence 99999999999999999988 7999999999999876543
No 62
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.6e-39 Score=312.32 Aligned_cols=301 Identities=19% Similarity=0.286 Sum_probs=242.1
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccC-CCCCeEEEEcCCCHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFE 80 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv-~~gd~V~i~~~n~~~ 80 (359)
++.+.|.+++ .|+++|+++.+..+||.||.++++++|..|.+ .|+ ++||+|+++++|+++
T Consensus 4 ~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~-----------------~g~~~~~~~V~i~~~n~~~ 64 (540)
T PRK13388 4 TIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIA-----------------LADPDRPLHVGVLLGNTPE 64 (540)
T ss_pred hHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------hcCCCCCCEEEEECCCCcH
Confidence 5667777765 69999999999999999999999999999999 699 799999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccc-cc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFD-QS 159 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (359)
++++++||+++|++++|+++.++.+++.++++.+++++++++.+....+.... ......+.+.. .. ...... ..
T Consensus 65 ~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~i~~~~-~~---~~~~~~~~~ 139 (540)
T PRK13388 65 MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD-LPGVRVLDVDT-PA---YAELVAAAG 139 (540)
T ss_pred HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc-ccCceEEEccc-hh---hhhhhcccc
Confidence 99999999999999999999999999999999999999999887665554431 01112222211 00 000000 00
Q ss_pred hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcE
Q 018211 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~ 239 (359)
.........++++++++|||||||.||||.++|.++..........+++.++|+++..+|++|..++...++.++..|++
T Consensus 140 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 140 ALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred CcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 01111224568999999999999999999999999998888888888999999999999999999987666678999999
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++.+.+++..+++. ++++++|++..+|..+..+....... .....+++.+ .|++++++.
T Consensus 220 ~v~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~l~~l~~~~~~~--------~~~~~~l~~~--~G~~~~~~~ 279 (540)
T PRK13388 220 VALPAKFSASGFLDD----------VRRYGATYFNYVGKPLAYILATPERP--------DDADNPLRVA--FGNEASPRD 279 (540)
T ss_pred EEECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCCCCc--------cccccceEEE--ECCCCCHHH
Confidence 999988999999998 88899999999999999887653211 1122456643 366778888
Q ss_pred HHHHHHHhCCcccccccCCcCcccccc
Q 018211 320 MQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
.+.|.+.+|.++++.||+||+++++..
T Consensus 280 ~~~~~~~~~~~l~~~YG~tE~~~~~~~ 306 (540)
T PRK13388 280 IAEFSRRFGCQVEDGYGSSEGAVIVVR 306 (540)
T ss_pred HHHHHHHhCCceecccccccccceeec
Confidence 899999899999999999999976654
No 63
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=8.1e-39 Score=313.42 Aligned_cols=307 Identities=17% Similarity=0.219 Sum_probs=244.9
Q ss_pred ChHHHHHHHcCCCCCCceEEeeC--CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC
Q 018211 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~ 78 (359)
+|+.+.|.+.++.+|+++|+.+. ++.+||.||.+++.++|..|.+ .|+++||+|+++++|+
T Consensus 28 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-----------------~g~~~g~~V~i~~~~~ 90 (546)
T PLN02330 28 LTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-----------------LGLRKGQVVVVVLPNV 90 (546)
T ss_pred CcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCc
Confidence 47889999999999999999873 5799999999999999999999 6999999999999999
Q ss_pred HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCC--CCCCccccc
Q 018211 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP--NVSSETTVF 156 (359)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 156 (359)
++++++++||+++|++++|+++..+.+++.+++++++++++++++.....+.... ...+.+.... .........
T Consensus 91 ~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~ 166 (546)
T PLN02330 91 AEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG----LPVIVLGEEKIEGAVNWKELL 166 (546)
T ss_pred hHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC----CcEEEecCCCCCCcccHHHHH
Confidence 9999999999999999999999999999999999999999999987766654431 1222221110 000011110
Q ss_pred ccc----hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc--cCCCceEEEecCchhhHHHHHHH
Q 018211 157 DQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 157 ~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~~~~~~~ 230 (359)
... .........++++++|+|||||||.||||.++|.++..++.......+ ....+..+..+|++|.+++...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 246 (546)
T PLN02330 167 EAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGIC 246 (546)
T ss_pred hhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHH
Confidence 000 001122334688999999999999999999999999876543221111 22356889999999999987677
Q ss_pred HHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhc--cceEE
Q 018211 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK--QLRLM 308 (359)
Q Consensus 231 ~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~--~l~~i 308 (359)
+.++..|+++++.+.+++..+++. ++++++|.+.++|.++..+.+.... ...++. .+|.+
T Consensus 247 ~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~--------~~~~~~~~~l~~i 308 (546)
T PLN02330 247 CATLRNKGKVVVMSRFELRTFLNA----------LITQEVSFAPIVPPIILNLVKNPIV--------EEFDLSKLKLQAI 308 (546)
T ss_pred HHHhhcCCEEEEecccCHHHHHHH----------HHHcCCeeeecCCHHHHHHHhCccc--------cccccchheeeeE
Confidence 888999999999999999999999 8889999999999999999875221 112222 47899
Q ss_pred EecCCCCCHHHHHHHHHHh-CCcccccccCCcCcccccc
Q 018211 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 309 ~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
++||+++++++.++|.+.| |+++++.||+||++.+...
T Consensus 309 ~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 347 (546)
T PLN02330 309 MTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLT 347 (546)
T ss_pred EEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceec
Confidence 9999999999999999998 8999999999999865543
No 64
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.5e-39 Score=310.84 Aligned_cols=300 Identities=20% Similarity=0.283 Sum_probs=243.7
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+|+.+.|.+.++.+|+++|+.++++.+||.|+.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 35 ~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~-----------------~gi~~g~~V~i~~~~~~~ 97 (516)
T PRK13383 35 TNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTR-----------------DGVAPGRAVGVMCRNGRG 97 (516)
T ss_pred CcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCCHH
Confidence 367888999999999999999988999999999999999999998 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccch
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (359)
+++++||++++|++++|+++.++.+++.++++.++++.+++++...+.+..... ....+.... .... ..
T Consensus 98 ~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~----~~~~~~~~~--~~~~----~~- 166 (516)
T PRK13383 98 FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD----AVAVIDPAT--AGAE----ES- 166 (516)
T ss_pred HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc----ceEEeccch--hhhh----cC-
Confidence 999999999999999999999999999999999999999998876655443321 111111100 0000 00
Q ss_pred hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHH--HHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCc
Q 018211 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID--AQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (359)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~--~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~ 238 (359)
.......++.++|+|||||||.||+|.++|.... .........+++..+|+++..+|++|.+++. .++.++..|+
T Consensus 167 --~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~ 243 (516)
T PRK13383 167 --GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGG 243 (516)
T ss_pred --CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCC
Confidence 0011234567899999999999999999997432 1222233456788899999999999999986 4777899999
Q ss_pred EEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHH
Q 018211 239 TVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (359)
Q Consensus 239 ~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~ 318 (359)
++++...++++.+++. ++++++|.+..+|.++..+....... ....+++++|.+++||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~gG~~l~~~ 307 (516)
T PRK13383 244 TVLTHRHFDAEAALAQ----------ASLHRADAFTAVPVVLARILELPPRV------RARNPLPQLRVVMSSGDRLDPT 307 (516)
T ss_pred EEEECCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHhccccc------cccCCCCceEEEEECCCCCCHH
Confidence 9999999999999998 78899999999999999987642211 0113468899999999999999
Q ss_pred HHHHHHHHhCCcccccccCCcCccccccc
Q 018211 319 VMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 319 ~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+.++|.+.+|.++++.||+||+|+.+...
T Consensus 308 ~~~~~~~~~g~~v~~~YG~tE~~~~~~~~ 336 (516)
T PRK13383 308 LGQRFMDTYGDILYNGYGSTEVGIGALAT 336 (516)
T ss_pred HHHHHHHHcCchhhhcccccccccceecc
Confidence 99999999999999999999998765543
No 65
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2e-39 Score=370.70 Aligned_cols=298 Identities=21% Similarity=0.316 Sum_probs=253.7
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++++.+|+++|++++++++||+||+++++++|..|.+ +|+++|++|+|+++|++++
T Consensus 3096 ~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~-----------------~gv~~g~~V~l~~~~s~~~ 3158 (3956)
T PRK12467 3096 LVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIA-----------------IGVGPDVLVGVAVERSVEM 3158 (3956)
T ss_pred cHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHH-----------------cCCCCCCeEEEEeCCCHHH
Confidence 57889999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchh
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
++++|||+++|++++|+++.++.+++.++++++++++++++....+.+... .......++... .......
T Consensus 3159 vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~ 3228 (3956)
T PRK12467 3159 IVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP---AGDTALTLDRLD-------LNGYSEN 3228 (3956)
T ss_pred HHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc---cCCceeeecchh-------hcccCCC
Confidence 999999999999999999999999999999999999999987654433211 111111111110 0011111
Q ss_pred hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEE
Q 018211 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~ 241 (359)
.......++++++|+|||||||.||||+++|+++.+.+......++++++|+++.+.|++|+.+.. .++.+|..|++++
T Consensus 3229 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~ 3307 (3956)
T PRK12467 3229 NPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQE-RFLWTLICGGCLV 3307 (3956)
T ss_pred CCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHH-HHHHHHhCCCEEE
Confidence 122345678999999999999999999999999999999999999999999999999999999974 6899999999999
Q ss_pred EcCC--CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+.+. +++..+++. +.++++|++.++|++++.+.+.. ...++++||.+++||+++++++
T Consensus 3308 i~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~l~~l~~~~----------~~~~~~~lr~~~~gGe~~~~~~ 3367 (3956)
T PRK12467 3308 VRDNDLWDPEELWQA----------IHAHRISIACFPPAYLQQFAEDA----------GGADCASLDIYVFGGEAVPPAA 3367 (3956)
T ss_pred ECCcccCCHHHHHHH----------HHHcCCEEEEcCHHHHHHHHhcc----------cccCCCCceEEEEecCCCCHHH
Confidence 9985 788999998 88999999999999999887641 1235788999999999999999
Q ss_pred HHHHHHHh-CCcccccccCCcCccccccc
Q 018211 320 MQQWETIT-GHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~TE~g~~~~~~ 347 (359)
.++|.+.+ +++++|.||+||+++.++..
T Consensus 3368 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~ 3396 (3956)
T PRK12467 3368 FEQVKRKLKPRGLTNGYGPTEAVVTVTLW 3396 (3956)
T ss_pred HHHHHHhCCCCEEEeCcccchhEeeeEEE
Confidence 99999887 68999999999999766543
No 66
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.4e-39 Score=318.71 Aligned_cols=308 Identities=21% Similarity=0.315 Sum_probs=239.1
Q ss_pred ChHHHHHHHcCCCCCCceEEeeC---------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeE
Q 018211 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V 71 (359)
+|+.+.|.++++.+|+++|+++. .+.+||+||.++++++|+.|.+ . +++||+|
T Consensus 21 ~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~-~~~gd~V 82 (631)
T PRK07769 21 TNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ-----------------V-TKPGDRV 82 (631)
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH-----------------h-cCCCCEE
Confidence 36788999999999999999863 2579999999999999999987 4 7999999
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeeeec-CCCCC--HHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC----CceeccC
Q 018211 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (359)
Q Consensus 72 ~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (359)
+++++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|++.+..+.+.......+ .....+.
T Consensus 83 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PRK07769 83 AILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD 162 (631)
T ss_pred EEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc
Confidence 999999999999999999999999999 45554 6789999999999999999876655544322211 1111111
Q ss_pred CCCCCCCcccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhH
Q 018211 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 224 (359)
.... . . . .........++++++|+|||||||.||||+++|.++..++......+++.++|+++..+|++|.+
T Consensus 163 ~~~~---~--~-~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 163 AVPD---E--V-G--ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred cccc---c--c-c--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCch
Confidence 1110 0 0 0 00011234568999999999999999999999999998888878888889999999999999999
Q ss_pred HHHHHHHHhhhcCcEEEEcCC--C--ChhHHHHHHHhhcCCCCCCCCCcc---eeeecchHHHHHHHhhhhhhhHHHHHH
Q 018211 225 GLFNALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAI---TAFTGVPTMYTRLIQGYEAMDTELQAA 297 (359)
Q Consensus 225 ~~~~~~~~~l~~G~~i~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~v---t~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (359)
|+.. ++.+++.|+++++.+. + ++..+++. +.++++ +++..+|.++..+..... ... ...
T Consensus 235 gl~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~p~~~~~l~~~~~-~~~--~~~ 300 (631)
T PRK07769 235 GLIT-VLLPALLGHYITFMSPAAFVRRPGRWIRE----------LARKPGGTGGTFSAAPNFAFEHAAARG-LPK--DGE 300 (631)
T ss_pred hhHH-HHHHHhhCCeEEEEChHHHHhCHHHHHHH----------HHhhccccCceEeeCCchHHHHHHhhc-cch--hcc
Confidence 9965 5666778999988752 4 78888888 666665 788999998877654210 000 000
Q ss_pred HHhhhccceEEEecCCCCCHHHHHHHHHHh---CC---cccccccCCcCcccccccc
Q 018211 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 298 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~---~~---~v~~~YG~TE~g~~~~~~~ 348 (359)
...++++||.+++||+++++++.++|.+.| |+ .+++.||+||++++++..+
T Consensus 301 ~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~ 357 (631)
T PRK07769 301 PPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTP 357 (631)
T ss_pred cCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccC
Confidence 124688999999999999999999999987 33 5999999999987666543
No 67
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2e-38 Score=307.96 Aligned_cols=309 Identities=24% Similarity=0.317 Sum_probs=247.8
Q ss_pred HHHHHHc-CCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHH
Q 018211 4 FKAAYKK-GSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (359)
Q Consensus 4 ~~~l~~~-a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~ 82 (359)
.+.+.++ ++.+|+++|+++++..+||.||.++++++|..|.+ .|+++|++|+++++|+++++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~-----------------~g~~~g~~v~l~~~~~~~~~ 69 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRR-----------------LGVKREERVLLLMLDGVDFP 69 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHH
Confidence 3455555 57799999999999999999999999999999998 69999999999999999999
Q ss_pred HHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCc-eeccCCCCC--CCCcccccc-c
Q 018211 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPN--VSSETTVFD-Q 158 (359)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~-~ 158 (359)
++++||+++|++++|+++..+.+++.++++.+++++++++....+.+.+.....+.. .++...... ......... .
T Consensus 70 ~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (508)
T TIGR02262 70 IAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATE 149 (508)
T ss_pred HHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcC
Confidence 999999999999999999999999999999999999999987766655543332211 111111100 000000000 0
Q ss_pred chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHH-HHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcC
Q 018211 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (359)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G 237 (359)
..........++++++|+|||||||.||+|.++|+++...+.. ....++++++|+++...|++|..++...++.++..|
T Consensus 150 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G 229 (508)
T TIGR02262 150 SEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVG 229 (508)
T ss_pred CCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcC
Confidence 0111122344689999999999999999999999999887765 455678889999999999999999877788889999
Q ss_pred cEEEEcCC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCC
Q 018211 238 ATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALP 316 (359)
Q Consensus 238 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~ 316 (359)
+++++.+. +++..+++. ++++++|.+.++|.++..+..... ......+++|.+++||++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~~~~~~~--------~~~~~~~~l~~~~~~G~~l~ 291 (508)
T TIGR02262 230 ATTVLMGERPTPDAVFDR----------LRRHQPTIFYGVPTLYAAMLADPN--------LPAEDQVRLRLCTSAGEALP 291 (508)
T ss_pred ceEEEeCCCCCHHHHHHH----------HHHHCCcEEecchHHHHHHhcCcc--------ccccccccceeEEEcCCCCC
Confidence 99998764 688889988 788999999999999988776421 11224578999999999999
Q ss_pred HHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 317 LPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 317 ~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++.+.|.+.+|+++++.||+||+|+++..+
T Consensus 292 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~ 322 (508)
T TIGR02262 292 AEVGQRWQARFGVDIVDGIGSTEMLHIFLSN 322 (508)
T ss_pred HHHHHHHHHHhCCchhhCccccccCceeecC
Confidence 9999999999999999999999999765543
No 68
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.7e-39 Score=339.71 Aligned_cols=310 Identities=24% Similarity=0.347 Sum_probs=253.0
Q ss_pred hHHHHHHHcCCCCCCceEEeeC-CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
++.+.+.++++.+|+++|+++. ++++||+||.++++++|+.|.+ ++++||+|+++++|+++
T Consensus 616 ~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~------------------~~~~g~~V~i~~~n~~~ 677 (1146)
T PRK08633 616 PLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR------------------ELKDEENVGILLPPSVA 677 (1146)
T ss_pred CHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH------------------hCCCCCeEEEECCCchH
Confidence 5678888999999999999974 6899999999999999999986 58999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhh--hcC--CceeccCCCCC-CCCcccc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS--KSG--AKFSLIPPVPN-VSSETTV 155 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~-~~~~~~~ 155 (359)
++++++||+++|++++|+++..+.+++.++++++++++++++++..+.+..... ..+ ........... .......
T Consensus 678 ~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1146)
T PRK08633 678 GALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKL 757 (1146)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHH
Confidence 999999999999999999999999999999999999999999876655442110 011 11111111100 0000000
Q ss_pred cc---c--chh---hh--cCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHH
Q 018211 156 FD---Q--SQA---EK--MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHG 225 (359)
Q Consensus 156 ~~---~--~~~---~~--~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~ 225 (359)
.. . .+. .. .....++|+++|+|||||||.||||.++|+++..++......++..++|++++.+|++|..+
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 837 (1146)
T PRK08633 758 TALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFG 837 (1146)
T ss_pred HHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHh
Confidence 00 0 000 00 13446789999999999999999999999999999888888888999999999999999999
Q ss_pred HHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhcc
Q 018211 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (359)
Q Consensus 226 ~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 304 (359)
+...++.++..|+++++.+ .++++.+++. ++++++|++..+|++++.+.+... ..+.++++
T Consensus 838 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~ 899 (1146)
T PRK08633 838 LTVTLWLPLLEGIKVVYHPDPTDALGIAKL----------VAKHRATILLGTPTFLRLYLRNKK--------LHPLMFAS 899 (1146)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhccc--------cCcccCCC
Confidence 9877889999999999876 4788899988 889999999999999998887521 22346789
Q ss_pred ceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 305 l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+|.+++||+++++++.+++++.+|.++++.||+||++++++..
T Consensus 900 lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~ 942 (1146)
T PRK08633 900 LRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVN 942 (1146)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEe
Confidence 9999999999999999999999999999999999998876544
No 69
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-38 Score=310.24 Aligned_cols=301 Identities=19% Similarity=0.265 Sum_probs=243.3
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.+.+. ++++|+.++++++||.||.++++++|..|.++ .|+++|++|+++++|++++
T Consensus 6 ~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~----------------~~~~~~~~V~i~~~n~~~~ 67 (529)
T PRK07867 6 TVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRAR----------------LDPTRPPHVGVLLDNTPEF 67 (529)
T ss_pred cHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEECCCCHHH
Confidence 56777877775 78999999999999999999999999999983 2789999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccc--cc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFD--QS 159 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 159 (359)
+++++||+++|++++|+++..+.+++.++++++++++++++++..+.+..... ......+.. .. ..+... ..
T Consensus 68 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~--~~~~~~~~~-~~---~~~~l~~~~~ 141 (529)
T PRK07867 68 SLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDP--GVRVINVDS-PA---WADELAAHRD 141 (529)
T ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhcc--CceEEEecc-cc---HHHHhcccCC
Confidence 99999999999999999999999999999999999999999877665544321 111111111 00 000000 00
Q ss_pred hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcE
Q 018211 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~ 239 (359)
.........++++++|+|||||||.||+|+++|.++..........++++++|+++..+|++|..+++..++.++..|++
T Consensus 142 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 221 (529)
T PRK07867 142 AEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGAS 221 (529)
T ss_pred CCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCce
Confidence 01112234568999999999999999999999999998888888888999999999999999999998778888999999
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++.+.+++..+++. ++++++|++.++|+.+..++...+.. ....+++|. ++||+.+++.+
T Consensus 222 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~ll~~~~~~--------~~~~~~lr~-~~gg~~~~~~~ 282 (529)
T PRK07867 222 IALRRKFSASGFLPD----------VRRYGATYANYVGKPLSYVLATPERP--------DDADNPLRI-VYGNEGAPGDI 282 (529)
T ss_pred EEecCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCCcc--------cccccceEE-EecCCCChHHH
Confidence 999999999999998 78899999999999999887653211 112356885 46888887765
Q ss_pred HHHHHHHhCCcccccccCCcCcccccc
Q 018211 320 MQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
++|.+.+|.++++.||+||+++++..
T Consensus 283 -~~~~~~~g~~l~~~YG~TE~~~~~~~ 308 (529)
T PRK07867 283 -ARFARRFGCVVVDGFGSTEGGVAITR 308 (529)
T ss_pred -HHHHHHhCCcEEEeeccccccccccc
Confidence 67777889999999999999876553
No 70
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-38 Score=309.63 Aligned_cols=311 Identities=22% Similarity=0.332 Sum_probs=244.8
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+|+.+.|.+.++++|+++|+.++++.+||.||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~-----------------~g~~~~~~v~v~~~n~~~ 65 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIA-----------------QGLGPGDHVGIYARNRIE 65 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCc--eeccCCCCCCC------Cc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVS------SE 152 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~ 152 (359)
++++++|++++|++++|+++.++.+++.++++++++++++++.+....+.++....... .+.+....... ..
T Consensus 66 ~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (533)
T PRK07798 66 YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDY 145 (533)
T ss_pred HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccH
Confidence 99999999999999999999999999999999999999999987766665553332211 11121111000 01
Q ss_pred ccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---------hcc------CCCceEEEe
Q 018211 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---------WEY------TSADQFLHC 217 (359)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---------~~~------~~~d~~l~~ 217 (359)
.+................+.++|+|||||||.||+|+++|.++.......... ... ..+++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 146 EDALAAGSPERDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHHHhccCCcCCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 11111101111111223456799999999999999999999987655432221 111 467899999
Q ss_pred cCchhhHHHHHHHHHhhhcCcEEEEcC--CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHH-HHhhhhhhhHHH
Q 018211 218 LPLHHVHGLFNALLAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR-LIQGYEAMDTEL 294 (359)
Q Consensus 218 ~pl~h~~~~~~~~~~~l~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~-l~~~~~~~~~~~ 294 (359)
.|++|..+++ .++.+++.|+++++.+ .+++..+++. ++++++|.+..+|..+.. +.....
T Consensus 226 ~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~~------ 288 (533)
T PRK07798 226 PPLMHGAGQW-AAFAALFSGQTVVLLPDVRFDADEVWRT----------IEREKVNVITIVGDAMARPLLDALE------ 288 (533)
T ss_pred cchhhhhhHH-HHHHHHhcCceEEEecCCCcCHHHHHHH----------HHHhCCeEEEechHHHHHHHHHHhc------
Confidence 9999999996 6889999999999999 7899999999 788999999999877654 333211
Q ss_pred HHHHHhhhccceEEEecCCCCCHHHHHHHHHHh-CCcccccccCCcCcccccc
Q 018211 295 QAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 295 ~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
.....+++++|.+++||+++++++.++|.+.+ +.++++.||+||+|.+...
T Consensus 289 -~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 340 (533)
T PRK07798 289 -ARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSG 340 (533)
T ss_pred -ccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeeccccccccccc
Confidence 11234678999999999999999999999988 8899999999999765544
No 71
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-38 Score=316.86 Aligned_cols=307 Identities=18% Similarity=0.191 Sum_probs=235.5
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC-----ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
|+.+.+.++ .+|+++|+++.+ +++||+||.+++.++|..|.+ +|+++||+|+++++
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~ 147 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-----------------LGVGPGDRVAAYLP 147 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 455555543 579999999743 689999999999999999999 79999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc---------HHHHHHHhhhcCC--ceeccCC
Q 018211 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSGA--KFSLIPP 145 (359)
Q Consensus 77 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~--~~~~~~~ 145 (359)
|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.......+. ..+.+..
T Consensus 148 n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (655)
T PRK03584 148 NIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPY 227 (655)
T ss_pred CCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEec
Confidence 9999999999999999999999999999999999999999999997643 2223333222221 1222221
Q ss_pred CCC---------CCCcccccc--cchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHH-HHHHHHHhhccCCCce
Q 018211 146 VPN---------VSSETTVFD--QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSADQ 213 (359)
Q Consensus 146 ~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~d~ 213 (359)
... .....+... ............+++++|+|||||||.||||+++|.+++. ........+++.++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~ 307 (655)
T PRK03584 228 LGPAAAAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDR 307 (655)
T ss_pred CCCcccccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCE
Confidence 110 000001100 0001111234568999999999999999999999998764 4555566678889999
Q ss_pred EEEecCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhh
Q 018211 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (359)
Q Consensus 214 ~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 289 (359)
+++..++.|..+. .++.+|+.|+++++.+. +++..+++. ++++++|++..+|++++.+.+....
T Consensus 308 ~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 308 FFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDL----------AAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred EEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHH----------HHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 9999999987654 36788999999999763 578889988 8889999999999999988764110
Q ss_pred hhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHh--CCcccccccCCcCccccc
Q 018211 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 290 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v~~~YG~TE~g~~~~ 345 (359)
.....++++||.+++||+++++++.++|.+.+ ++++++.||+||+++.+.
T Consensus 376 ------~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~ 427 (655)
T PRK03584 376 ------PGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFV 427 (655)
T ss_pred ------ccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccc
Confidence 11235678999999999999999999999988 478999999999876443
No 72
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-38 Score=310.14 Aligned_cols=310 Identities=19% Similarity=0.228 Sum_probs=247.5
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.|.+.++.+|+++|++++++.+||+||.+++.++|..|.+ .|+++||+|+++++|+++
T Consensus 10 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~n~~~ 72 (540)
T PRK06164 10 DTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAA-----------------QGVRRGDRVAVWLPNCIE 72 (540)
T ss_pred CCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCcHH
Confidence 478899999999999999999988999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH-----HHHHHHhhhc--CC-ceeccC-CCCCCCC
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKS--GA-KFSLIP-PVPNVSS 151 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~--~~-~~~~~~-~~~~~~~ 151 (359)
++++++||+++|++++|+++..+.+++.++++++++++++++.+.. +.+....... .. ....+. .......
T Consensus 73 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (540)
T PRK06164 73 WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPA 152 (540)
T ss_pred HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCC
Confidence 9999999999999999999999999999999999999999986542 2222211110 01 111111 0000000
Q ss_pred cc-----cccccc-hh----hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCch
Q 018211 152 ET-----TVFDQS-QA----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (359)
Q Consensus 152 ~~-----~~~~~~-~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (359)
.. ...... .. .......++++++++|||||||.||+|.++|.++..++......+++..+|++++.+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~ 232 (540)
T PRK06164 153 PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFC 232 (540)
T ss_pred CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCch
Confidence 00 000000 00 001223468899999999999999999999999999988888888999999999999999
Q ss_pred hhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhh
Q 018211 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (359)
Q Consensus 222 h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 301 (359)
|.+|+. .++.++..|+++++.+.+++..+++. ++++++|+++++|.++..+.+. .....+
T Consensus 233 ~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~l~~l~~~---------~~~~~~ 292 (540)
T PRK06164 233 GVFGFS-TLLGALAGGAPLVCEPVFDAARTARA----------LRRHRVTHTFGNDEMLRRILDT---------AGERAD 292 (540)
T ss_pred hHHHHH-HHHHHHhcCceEEecCCCCHHHHHHH----------HHHhCCeeecCCHHHHHHHHHh---------hcccCC
Confidence 999995 68999999999999999999999998 8889999999999999998875 122346
Q ss_pred hccceEEEecC-CCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 302 AKQLRLMMCGS-SALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 302 ~~~l~~i~~~G-~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
+++++.+..+| .+.+.++.+++.+. |+++++.||+||++++++...
T Consensus 293 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~ 339 (540)
T PRK06164 293 FPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQP 339 (540)
T ss_pred CcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccC
Confidence 78899887766 55556666666654 999999999999988765543
No 73
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=5.6e-39 Score=344.91 Aligned_cols=306 Identities=15% Similarity=0.159 Sum_probs=243.1
Q ss_pred hHHHHHHHcCCCCCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEE
Q 018211 2 EVFKAAYKKGSMARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (359)
++.+.+.++++.+|+++|+++ +++++||+||.++++++|..|.+ .|+++|++|+
T Consensus 237 ~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-----------------~gv~~g~~V~ 299 (1389)
T TIGR03443 237 AIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK-----------------TGIKRGDVVM 299 (1389)
T ss_pred cHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEE
Confidence 467889999999999999985 35789999999999999999999 6999999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc---HHHHHHHhhh-c----CCceeccC
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---REVLQNVASK-S----GAKFSLIP 144 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~-~----~~~~~~~~ 144 (359)
++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++... ...+...... . ......+.
T Consensus 300 i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1389)
T TIGR03443 300 IYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQ 379 (1389)
T ss_pred EEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEec
Confidence 99999999999999999999999999999999999999999999999987542 1111111110 0 00001111
Q ss_pred CCCCCC-----Cc-ccccccc----hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceE
Q 018211 145 PVPNVS-----SE-TTVFDQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQF 214 (359)
Q Consensus 145 ~~~~~~-----~~-~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~ 214 (359)
...... .. .+..... .........++++++|+|||||||.||||+++|+++.+.+......+++.++|++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 459 (1389)
T TIGR03443 380 DDGSLVGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKF 459 (1389)
T ss_pred ccccccccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEE
Confidence 000000 00 0000000 0011122457899999999999999999999999999998888888999999999
Q ss_pred EEecCchhhHHHHHHHHHhhhcCcEEEEcCCC---ChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhh
Q 018211 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (359)
Q Consensus 215 l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 291 (359)
+...|++|+.++. .++.+|+.|+++++++.. ++..+++. ++++++|++.++|++++.+....
T Consensus 460 ~~~~~~~~d~~~~-~i~~~L~~G~~l~~~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~---- 524 (1389)
T TIGR03443 460 TMLSGIAHDPIQR-DMFTPLFLGAQLLVPTADDIGTPGRLAEW----------MAKYGATVTHLTPAMGQLLSAQA---- 524 (1389)
T ss_pred EEecCceecchHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhcc----
Confidence 9999999998875 689999999999998753 56677777 88899999999999999886531
Q ss_pred HHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHh-CCcccccccCCcCcccccc
Q 018211 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 292 ~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
...+++||.+++||+++++...+++.+.. +++++|.||+||++..++.
T Consensus 525 -------~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~ 573 (1389)
T TIGR03443 525 -------TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSY 573 (1389)
T ss_pred -------cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEE
Confidence 13478899999999999999999998876 7999999999999876554
No 74
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-38 Score=312.01 Aligned_cols=311 Identities=22% Similarity=0.342 Sum_probs=248.0
Q ss_pred ChHHHHHHHcCCCCCCceEEeeC---CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC
Q 018211 1 MEVFKAAYKKGSMARDSVAIRAD---QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~---~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n 77 (359)
+|+.+.|.+.+..+|+++|+.++ ++.+||.||.++++++|..|.+. .|+++||+|+++++|
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~gd~V~~~~~n 73 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDE----------------LGITGDQRVGSMMYN 73 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEEeCC
Confidence 57889999999999999999874 37999999999999999999852 599999999999999
Q ss_pred CHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-c-eeccCCCCC-------
Q 018211 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-K-FSLIPPVPN------- 148 (359)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~------- 148 (359)
+++++++++||.++|++++++++..+.+++.++++.+++++++++....+.+.+....... . ++.......
T Consensus 74 ~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 153 (576)
T PRK05620 74 CAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHM 153 (576)
T ss_pred CHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhcc
Confidence 9999999999999999999999999999999999999999999998777666655443321 1 111111000
Q ss_pred -----CCCcccccccch-hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHH--HHhhccCCCceEEEecCc
Q 018211 149 -----VSSETTVFDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQML--TEAWEYTSADQFLHCLPL 220 (359)
Q Consensus 149 -----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~--~~~~~~~~~d~~l~~~pl 220 (359)
+.......+... ........++++++++|||||||.||||.++|.++....... ...+++..+|++++.+|+
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl 233 (576)
T PRK05620 154 PEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPI 233 (576)
T ss_pred ccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCCh
Confidence 000000100000 011223456899999999999999999999999987654432 334678889999999999
Q ss_pred hhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHH
Q 018211 221 HHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (359)
Q Consensus 221 ~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 299 (359)
+|.+++. ..+.++..|+++++.+ .+++..+++. ++++++|++.++|.++..++.+... ..
T Consensus 234 ~h~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~ 294 (576)
T PRK05620 234 YHVLSWG-VPLAAFMSGTPLVFPGPDLSAPTLAKI----------IATAMPRVAHGVPTLWIQLMVHYLK--------NP 294 (576)
T ss_pred HHhhhhH-HHHHHHhcCceEEecCCCCCHHHHHHH----------HHHhcCceeeecCHHHHHHHHHhhc--------cC
Confidence 9999985 4778899999999886 5788999888 8889999999999999988764211 11
Q ss_pred hhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 300 ~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
.+..++|.+++||+++++++.++|.+.+|+++++.||+||++.++..
T Consensus 295 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 341 (576)
T PRK05620 295 PERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTV 341 (576)
T ss_pred cccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceee
Confidence 22357999999999999999999999899999999999999976543
No 75
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-38 Score=308.91 Aligned_cols=311 Identities=25% Similarity=0.302 Sum_probs=248.4
Q ss_pred hHHHHHHHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
++.+.|.+.++.+|+++|+++ .++.+||.||.++++++|..|.+ .|+++||+|+++++|++
T Consensus 19 ~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gi~~g~~V~i~~~~~~ 81 (558)
T PRK12583 19 TIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLA-----------------LGVQPGDRVGIWAPNCA 81 (558)
T ss_pred cHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCh
Confidence 678899999999999999987 45789999999999999999998 79999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH-----HHHHHHhhhc-------------CC--c
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKS-------------GA--K 139 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-------------~~--~ 139 (359)
++++++||++++|++++++++..+.+++.++++++++++++++.... ..+....... +. .
T Consensus 82 ~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
T PRK12583 82 EWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRG 161 (558)
T ss_pred HHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceE
Confidence 99999999999999999999999999999999999999999875421 1222211110 00 0
Q ss_pred eeccCCC--CCCCCcccccccc-------hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCC
Q 018211 140 FSLIPPV--PNVSSETTVFDQS-------QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS 210 (359)
Q Consensus 140 ~~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~ 210 (359)
....... ............. .........++++++++|||||||.||+|.++|.++..++......+++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 241 (558)
T PRK12583 162 VVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE 241 (558)
T ss_pred EEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC
Confidence 0000000 0000000000000 001112335688999999999999999999999999998888888889999
Q ss_pred CceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhh
Q 018211 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (359)
Q Consensus 211 ~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 289 (359)
+|++++..|++|..+....++.++..|++++++. .+++..+++. ++++++|++.++|+++..++....
T Consensus 242 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~- 310 (558)
T PRK12583 242 HDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQA----------VEEERCTALYGVPTMFIAELDHPQ- 310 (558)
T ss_pred CCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcccc-
Confidence 9999999999999999888999999999999754 5788888888 888999999999999988776522
Q ss_pred hhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC-CcccccccCCcCccccccc
Q 018211 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 290 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~TE~g~~~~~~ 347 (359)
....+++++|.+++||+++++++.+++.+.++ .++++.||+||+++++..+
T Consensus 311 -------~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~ 362 (558)
T PRK12583 311 -------RGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQT 362 (558)
T ss_pred -------ccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceecc
Confidence 12245789999999999999999999999886 5799999999999876654
No 76
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-38 Score=310.41 Aligned_cols=310 Identities=20% Similarity=0.290 Sum_probs=246.0
Q ss_pred ChHHHHHHHcCCCCCCceEEee--C--CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 1 MEVFKAAYKKGSMARDSVAIRA--D--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~--~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
+++.+.|.++++.+|+++++.. + .+++||.||.++++++|..|.+ .|+++||+|+++++
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-----------------~g~~~gd~v~i~~~ 72 (542)
T PRK06018 10 LLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-----------------DGIKLGDRVATIAW 72 (542)
T ss_pred CCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 4678899999999999999984 2 3789999999999999999999 69999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC-ceec-cCCCCCCCC---
Q 018211 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSL-IPPVPNVSS--- 151 (359)
Q Consensus 77 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~--- 151 (359)
|+++++++++|++++|++++|+++.++.+++.++++.++++.++++.++.+.+.+....... ...+ +........
T Consensus 73 ~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (542)
T PRK06018 73 NTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTL 152 (542)
T ss_pred CchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCc
Confidence 99999999999999999999999999999999999999999999998877776665443321 1111 111100000
Q ss_pred -----cccccccch-hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHH-H-HHHHHHHhhccCCCceEEEecCchhh
Q 018211 152 -----ETTVFDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID-A-QVQMLTEAWEYTSADQFLHCLPLHHV 223 (359)
Q Consensus 152 -----~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~-~-~~~~~~~~~~~~~~d~~l~~~pl~h~ 223 (359)
......... ........++++++|+|||||||.||+|.+||.+.+ . ........+++..+|+++...|++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~ 232 (542)
T PRK06018 153 KNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHA 232 (542)
T ss_pred cccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHH
Confidence 000000000 001123455789999999999999999999999743 2 22233456678899999999999999
Q ss_pred HHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhh
Q 018211 224 HGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAA 302 (359)
Q Consensus 224 ~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 302 (359)
.++.. .+.++..|+++++.. .+++..+++. ++++++|++.++|+++..+.+..... ..++
T Consensus 233 ~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~~--------~~~~ 293 (542)
T PRK06018 233 NSWGI-AFSAPSMGTKLVMPGAKLDGASVYEL----------LDTEKVTFTAGVPTVWLMLLQYMEKE--------GLKL 293 (542)
T ss_pred hhhHH-HHhhhhcCceEEccCcCCCHHHHHHH----------HHhcCCceeecCcHHHHHHHhccccc--------CCCc
Confidence 88754 567789999998875 5788888888 88899999999999999988753211 2346
Q ss_pred ccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 303 KQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 303 ~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++|.++++|+++++++.++|++ +|+++++.||+||++.++..+
T Consensus 294 ~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~ 337 (542)
T PRK06018 294 PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLA 337 (542)
T ss_pred ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccc
Confidence 78999999999999999999999 899999999999999876544
No 77
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=5.3e-38 Score=307.33 Aligned_cols=310 Identities=22% Similarity=0.327 Sum_probs=243.0
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++++.+|+++|+.++++.+||.||.++++++|..|.+ .|+.+||+|+++++|++++
T Consensus 22 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~-----------------~gi~~g~~V~i~~~~~~~~ 84 (541)
T TIGR03205 22 TLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLR-----------------AGYGKDASVALYLGNTPDH 84 (541)
T ss_pred CHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChHH
Confidence 56788999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc--HHHHHHHhhhcCC-ceeccCCCCC--C-------
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY--REVLQNVASKSGA-KFSLIPPVPN--V------- 149 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~--~------- 149 (359)
+++++|++++|++++|+++..+.+++.++++.++++++++++.. .+...+....... ..++...... .
T Consensus 85 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (541)
T TIGR03205 85 PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPI 164 (541)
T ss_pred HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEeccccccccccccccc
Confidence 99999999999999999999999999999999999999988631 1112111111111 1111111000 0
Q ss_pred CC------ccccccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh------ccCCCceEEE
Q 018211 150 SS------ETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW------EYTSADQFLH 216 (359)
Q Consensus 150 ~~------~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~------~~~~~d~~l~ 216 (359)
.. ....... ..........++++++++|||||||.||+|.++|+++....... ..+ .....+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~ 243 (541)
T TIGR03205 165 PADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVIC 243 (541)
T ss_pred CCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEE
Confidence 00 0000000 00011123456899999999999999999999999987654422 221 2234578999
Q ss_pred ecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHH
Q 018211 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (359)
Q Consensus 217 ~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~ 296 (359)
..|++|..++...++.++..|+++++...+++..+++. +.++++|++.++|+++..+.+...
T Consensus 244 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~-------- 305 (541)
T TIGR03205 244 VLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRD----------IEEKRATVFPGVPTMWIALANDPS-------- 305 (541)
T ss_pred eccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCeEeechHHHHHHHHhCcc--------
Confidence 99999999988778889999999999988899999999 888999999999999998876421
Q ss_pred HHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 297 ASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 297 ~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
....+++++|.++.||+++++++.+++.+.+|.++++.||+||++++++..
T Consensus 306 ~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~ 356 (541)
T TIGR03205 306 LEKRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGH 356 (541)
T ss_pred ccccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccC
Confidence 122456789999999999999999999988899999999999999876554
No 78
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=4.5e-38 Score=306.17 Aligned_cols=310 Identities=24% Similarity=0.286 Sum_probs=246.7
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC-----ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
++.+++.+.++++|+++|+.+.+ +.+||.||.++++++|..|.+ +|+++||+|+++++
T Consensus 8 ~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-----------------~g~~~~~~v~i~~~ 70 (517)
T PRK08008 8 HLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-----------------LGIRKGDKVALHLD 70 (517)
T ss_pred cHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 57889999999999999998753 789999999999999999998 69999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC--CceeccCCCC--C---C
Q 018211 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVP--N---V 149 (359)
Q Consensus 77 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~---~ 149 (359)
|+++++++++||+++|++++++++..+.+++.+++++++++.++++.+..+.+.++..... .+...+.... . .
T Consensus 71 n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (517)
T PRK08008 71 NCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGV 150 (517)
T ss_pred CCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999887776665543321 1111111110 0 0
Q ss_pred CCcccccccch--hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHH
Q 018211 150 SSETTVFDQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (359)
Q Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~ 227 (359)
........... ........++++++|+|||||||.||+|.++|.++............+..++++++.+|++|..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (517)
T PRK08008 151 SSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQC 230 (517)
T ss_pred cCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHH
Confidence 00000000000 0112233568999999999999999999999999986554444444577899999999999988877
Q ss_pred HHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceE
Q 018211 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (359)
Q Consensus 228 ~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 307 (359)
..++.++..|+++++.+.++++.+++. ++++++|++.++|.+++.+........ ...++++.
T Consensus 231 ~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~~--------~~~~~l~~ 292 (517)
T PRK08008 231 TAAMAAFSAGATFVLLEKYSARAFWGQ----------VCKYRATITECIPMMIRTLMVQPPSAN--------DRQHCLRE 292 (517)
T ss_pred HHHHHHHhcCcEEEEccccCHHHHHHH----------HHHcCCcEEechHHHHHHHHhCCCccc--------ccccccee
Confidence 778899999999999999999999999 888999999999999998876532111 12356787
Q ss_pred EEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 308 i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+.++ ++++++..+.|.+.+|+++++.||+||+++.++..
T Consensus 293 ~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 331 (517)
T PRK08008 293 VMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGD 331 (517)
T ss_pred eEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccC
Confidence 7775 47899999999998999999999999998755443
No 79
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=4.5e-38 Score=307.41 Aligned_cols=307 Identities=18% Similarity=0.235 Sum_probs=244.6
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.+.++ |+++|++++++.+||.||.++++++|..|.+ .|+++|++|+++++|++++
T Consensus 26 ~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-----------------~g~~~g~~V~v~~~n~~~~ 86 (536)
T PRK10946 26 PLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRR-----------------QGIKPGDTALVQLGNVAEF 86 (536)
T ss_pred cHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCChHHH
Confidence 56788888886 9999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH-----HHHHHHhhhcC-CceeccCCCCCCCCcccc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG-AKFSLIPPVPNVSSETTV 155 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 155 (359)
+++++||+++|++++++.+....+++..+++++++++++++.+.. .....+....+ ..................
T Consensus 87 ~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 166 (536)
T PRK10946 87 YITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDA 166 (536)
T ss_pred HHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHH
Confidence 999999999999988887778888999999999999999876431 12222222221 111111111111011111
Q ss_pred ccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHH-HHHHh
Q 018211 156 FDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALLAP 233 (359)
Q Consensus 156 ~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~~ 233 (359)
... ..........++++++++|||||||.||||+++|+++...+......+++.++|++++.+|++|.+++.. .++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 246 (536)
T PRK10946 167 INHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGV 246 (536)
T ss_pred hhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHH
Confidence 100 0011122345689999999999999999999999999999988888889999999999999999888753 46788
Q ss_pred hhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCC
Q 018211 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (359)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~ 313 (359)
+..|+++++.+.+++..+++. ++++++|++.++|.++..+.+.... ......++++|.+++||+
T Consensus 247 l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 247 FLAGGTVVLAPDPSATLCFPL----------IEKHQVNVTALVPPAVSLWLQAIAE------GGSRAQLASLKLLQVGGA 310 (536)
T ss_pred hhcCcEEEECCCCCHHHHHHH----------HHHhCCcEEEeChHHHHHHHhhhcc------cCccccccceeEEEECCC
Confidence 999999999998999998888 8889999999999999998765211 111234678999999999
Q ss_pred CCCHHHHHHHHHHhCCcccccccCCcCccc
Q 018211 314 ALPLPVMQQWETITGHRLLERYGMTEGCTK 343 (359)
Q Consensus 314 ~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~ 343 (359)
++++++.+.|.+.+|+++++.||+||++..
T Consensus 311 ~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~ 340 (536)
T PRK10946 311 RLSETLARRIPAELGCQLQQVFGMAEGLVN 340 (536)
T ss_pred CCCHHHHHHHHHhcCCeEEEeeccccccee
Confidence 999999999999899999999999997543
No 80
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-38 Score=309.25 Aligned_cols=308 Identities=19% Similarity=0.280 Sum_probs=244.9
Q ss_pred hHHHHHHHcCCCCCCceEEeeC----CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n 77 (359)
++.+.|...++.+|+++++.+. .+.+||.||.++++++|+.|.+ .|+++||+|+++++|
T Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~~d~v~i~~~~ 73 (539)
T PRK07008 11 LISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-----------------LGVEPGDRVGTLAWN 73 (539)
T ss_pred CHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCC
Confidence 3567888889999999888742 2689999999999999999999 699999999999999
Q ss_pred CHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCce--eccCCCCCC------
Q 018211 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF--SLIPPVPNV------ 149 (359)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------ 149 (359)
+++++++++||+++|++++|+++.++.+++.++++.+++++++++.++.+.+.++........ +.+......
T Consensus 74 ~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (539)
T PRK07008 74 GYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTP 153 (539)
T ss_pred cHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcc
Confidence 999999999999999999999999999999999999999999999887666655443322211 111111000
Q ss_pred -CCccccccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHH--HHHHhhccCCCceEEEecCchhhHH
Q 018211 150 -SSETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ--MLTEAWEYTSADQFLHCLPLHHVHG 225 (359)
Q Consensus 150 -~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~--~~~~~~~~~~~d~~l~~~pl~h~~~ 225 (359)
....+.... ..........++++++++|||||||.||+|++||.+++.+.. .....++..++|+++...|++|..+
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~ 233 (539)
T PRK07008 154 LLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNA 233 (539)
T ss_pred cccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhh
Confidence 000000000 011112234568899999999999999999999999875432 2334567888999999999999887
Q ss_pred HHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhcc
Q 018211 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (359)
Q Consensus 226 ~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 304 (359)
+. .++.++..|+++++.+ .++++.+++. ++++++|++.++|+++..+.+.... ...++++
T Consensus 234 ~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~P~~~~~l~~~~~~--------~~~~~~~ 294 (539)
T PRK07008 234 WG-LPYSAPLTGAKLVLPGPDLDGKSLYEL----------IEAERVTFSAGVPTVWLGLLNHMRE--------AGLRFST 294 (539)
T ss_pred HH-HHHHHHhcCceEEEecCCcCHHHHHHH----------HHHcCCEEEEechHHHHHHHhcccc--------cCCCccc
Confidence 64 3577899999999874 6788999888 8889999999999999998875321 2245789
Q ss_pred ceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccc
Q 018211 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 305 l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~ 345 (359)
+|.++++|+++++++.++|.+.+|+++++.||+||+++.+.
T Consensus 295 l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~ 335 (539)
T PRK07008 295 LRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGT 335 (539)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccce
Confidence 99999999999999999999989999999999999997554
No 81
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.2e-38 Score=313.04 Aligned_cols=304 Identities=19% Similarity=0.269 Sum_probs=233.3
Q ss_pred ChHHHHHHHcCCCCCCceEEeeC---------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeE
Q 018211 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V 71 (359)
||+.+.+.++++.+|+++|+++. .+.+||+||.++++++|+.|.+ . +++||+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-----------------~-~~~gd~V 95 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ-----------------V-AGPGDRV 95 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH-----------------h-cCCCCEE
Confidence 47788899999999999999862 1489999999999999999987 4 8999999
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeeeec-CCCCC--HHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC----CceeccC
Q 018211 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (359)
Q Consensus 72 ~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (359)
+++++|+++++++++||+++|++++|+ ++.++ .+++.+++++++++++|++....+.+........ ...+.++
T Consensus 96 ~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 175 (612)
T PRK12476 96 AILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAID 175 (612)
T ss_pred EEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEec
Confidence 999999999999999999999999999 56666 7899999999999999999876665544433221 1122221
Q ss_pred CCCCCCCcccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc-cCCCceEEEecCchhh
Q 018211 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHCLPLHHV 223 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~h~ 223 (359)
.... . ...........++++++|+|||||||.||||.++|+++..++......++ +.+++++++++|++|.
T Consensus 176 ~~~~---~-----~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~ 247 (612)
T PRK12476 176 AIPD---S-----AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHD 247 (612)
T ss_pred cccc---c-----ccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccc
Confidence 1110 0 00001112345689999999999999999999999999988777666677 6788999999999999
Q ss_pred HHHHHHHHHhhhcCcEEEEcC--CC--ChhHHHHHHHhhcCCCCCC--CCCcceeeecchHHHHHHHhhhhhhhHHHHHH
Q 018211 224 HGLFNALLAPLYAGATVEFMP--KF--SVRGIWQRWRESYPVNGNR--AGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (359)
Q Consensus 224 ~~~~~~~~~~l~~G~~i~~~~--~~--~~~~~~~~~~~~~~~~~~i--~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (359)
.++...++..+ .|++.++.. .+ ++..+++. + .++++|.+..+|+++..+....... ...
T Consensus 248 ~g~~~~~~~~~-~gg~~~~~~~~~~~~~p~~~~~~----------i~~~~~~~t~~~~~P~~~~~l~~~~~~~----~~~ 312 (612)
T PRK12476 248 MGLSMIGFPAV-YGGHSTLMSPTAFVRRPQRWIKA----------LSEGSRTGRVVTAAPNFAYEWAAQRGLP----AEG 312 (612)
T ss_pred cchHHHHHHHh-cCCeEEEECHHHHHHHHHHHHHH----------HhhhccCCeEEEeCCcHHHHHHHHhcCh----hhh
Confidence 99865444445 455554443 23 78888887 5 4589999999999988877531100 011
Q ss_pred HHhhhccceEEEecCCCCCHHHHHHHHHHh---CC---cccccccCCcCcccccc
Q 018211 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEGCTKGRH 346 (359)
Q Consensus 298 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~---~~---~v~~~YG~TE~g~~~~~ 346 (359)
...+++++| +++||+++++++.++|.+.| |+ ++++.||+||+++.++.
T Consensus 313 ~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~ 366 (612)
T PRK12476 313 DDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVAT 366 (612)
T ss_pred cCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeec
Confidence 223578899 99999999999999999987 54 48999999999865543
No 82
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-38 Score=302.35 Aligned_cols=275 Identities=33% Similarity=0.502 Sum_probs=233.0
Q ss_pred CCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHH
Q 018211 11 GSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWF 90 (359)
Q Consensus 11 a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 90 (359)
++..++++|++++++++||.||.++++++|..|.. +|+|+++++|+++++++++||++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~----------------------~~~V~l~~~~~~~~~~~~la~~~ 67 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVAG----------------------ARRVAVLATPTLATVLAVVGALI 67 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhcc----------------------CCEEEEECCCCHHHHHHHHHHHh
Confidence 45569999999999999999999999999999964 69999999999999999999999
Q ss_pred hCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchhhhcCCCCCC
Q 018211 91 SGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGE 170 (359)
Q Consensus 91 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
+|++++|+++..+.+++.++++++++++++++.+.. ..... ...+.. .... ........++
T Consensus 68 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~------~~~~~--~~~~~~--~~~~---------~~~~~~~~~~ 128 (471)
T PRK07787 68 AGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDD------PAGLP--HVPVRL--HARS---------WHRYPEPDPD 128 (471)
T ss_pred cCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCcc------ccccc--ceeeec--cccc---------cccCCCCCCC
Confidence 999999999999999999999999999999976310 00000 000000 0000 0011123568
Q ss_pred CcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhH
Q 018211 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250 (359)
Q Consensus 171 ~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~ 250 (359)
++++|+|||||||.||+|.++|.++..++......++..++|++++.+|++|..|++..++.++..|+++++.+.+++..
T Consensus 129 ~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 208 (471)
T PRK07787 129 APALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEA 208 (471)
T ss_pred ceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHH
Confidence 99999999999999999999999999998888888889999999999999999999888999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCc
Q 018211 251 IWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHR 330 (359)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~ 330 (359)
+++. ++ +++|++..+|+++..+.+... ....++++|.++.||+++++++.++|.+.++.+
T Consensus 209 ~~~~----------i~-~~~t~~~~~P~~~~~l~~~~~---------~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~ 268 (471)
T PRK07787 209 YAQA----------LS-EGGTLYFGVPTVWSRIAADPE---------AARALRGARLLVSGSAALPVPVFDRLAALTGHR 268 (471)
T ss_pred HHHH----------Hh-hCceEEEcchHHHHHHHhCcc---------ccccccceeEEEECCCCCCHHHHHHHHHHcCCC
Confidence 9998 78 999999999999999886421 123567899999999999999999999989999
Q ss_pred ccccccCCcCcccccc
Q 018211 331 LLERYGMTEGCTKGRH 346 (359)
Q Consensus 331 v~~~YG~TE~g~~~~~ 346 (359)
+++.||+||+++.++.
T Consensus 269 ~~~~YG~tE~~~~~~~ 284 (471)
T PRK07787 269 PVERYGMTETLITLST 284 (471)
T ss_pred eecccCccccCcceec
Confidence 9999999999875443
No 83
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.3e-37 Score=306.16 Aligned_cols=309 Identities=15% Similarity=0.237 Sum_probs=240.0
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+|+.+.+...++.+|+++|+++++.++||+||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~-----------------~g~~~gd~V~i~~~n~~~ 82 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAK-----------------RSIGPGSTVAVIAPNIPA 82 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCcHH
Confidence 357788889999999999999988999999999999999999999 799999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhc--------C-CceeccCCCCCCC-
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKS--------G-AKFSLIPPVPNVS- 150 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~- 150 (359)
++++++||+++|++++|+++..+.+++.++++.++++++++++...+...+..... . .....+.......
T Consensus 83 ~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (567)
T PLN02479 83 MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPK 162 (567)
T ss_pred HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcc
Confidence 99999999999999999999999999999999999999999987655444332211 0 1111111100000
Q ss_pred -----------Ccccccccchh--hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEe
Q 018211 151 -----------SETTVFDQSQA--EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHC 217 (359)
Q Consensus 151 -----------~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~ 217 (359)
...+....... ........+++++++|||||||.||||.+||.++..........+++..+|++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T PLN02479 163 SLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWT 242 (567)
T ss_pred ccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEe
Confidence 00000000000 00112233467889999999999999999999988766665666788899999999
Q ss_pred cCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHH
Q 018211 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (359)
Q Consensus 218 ~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (359)
.|++|..++...+...+..|.+++ ...+++..+++. ++++++|++..+|.++..+...... .
T Consensus 243 ~p~~h~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~-------~ 304 (567)
T PLN02479 243 LPMFHCNGWCFTWTLAALCGTNIC-LRQVTAKAIYSA----------IANYGVTHFCAAPVVLNTIVNAPKS-------E 304 (567)
T ss_pred cchhhhhhHHHHHHHHhhcCceEe-ccCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhhhhh-------c
Confidence 999999998654445566666654 457899999998 8899999999999999998765211 0
Q ss_pred HHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccc
Q 018211 298 SASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 298 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~ 345 (359)
....+++++.++++|+++++.+.++|.+. +.++++.||+||+++.+.
T Consensus 305 ~~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~ 351 (567)
T PLN02479 305 TILPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPST 351 (567)
T ss_pred ccccccceeEEEEcCCCCCHHHHHHHHhc-CCceeccccccccccccc
Confidence 11246889999999999999999999875 999999999999975433
No 84
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.6e-38 Score=308.22 Aligned_cols=297 Identities=16% Similarity=0.246 Sum_probs=246.6
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
|+.+.|.+.++.+|+++|+.+.++.+||.||.+++.++|..|.+ .|+++|++|+++++|+.++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~-----------------~g~~~~~~V~i~~~~~~~~ 63 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQK-----------------RILPKKSPIIVYGHMEPHM 63 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHH-----------------hCCCCCCeEEEEeCCCHHH
Confidence 57899999999999999999999999999999999999999998 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchh
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
+++++||+++|++++|+++.++.+++.++++..+++.++++.+....... ...+.+...... .......
T Consensus 64 ~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~~~ 132 (502)
T TIGR01734 64 LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG------TQIITLSALEQA-----ETSGGPV 132 (502)
T ss_pred HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC------CceEEchHhhhh-----hhhcCCc
Confidence 99999999999999999999999999999999999999998764322111 111111100000 0000001
Q ss_pred hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEE
Q 018211 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~ 241 (359)
.......++++++|+|||||||.||+|.++|.++...+......++...+++++...|++|..++. .++.++..|++++
T Consensus 133 ~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~ 211 (502)
T TIGR01734 133 SFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLH 211 (502)
T ss_pred cccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHH-HHHHHHHCCCEEE
Confidence 111233568899999999999999999999999999888888888888999999999999999885 6889999999999
Q ss_pred EcCC---CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHH
Q 018211 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (359)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~ 318 (359)
+.+. .++..+++. +.++++|.+..+|.+++.++... ......+++++.++++|++++.+
T Consensus 212 ~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~p~~~~~~l~~~--------~~~~~~~~~l~~~~~~G~~~~~~ 273 (502)
T TIGR01734 212 CLDKDITNNFKLLFEE----------LPKTGLNVWVSTPSFVDMCLLDP--------NFNQENYPHLTHFLFCGEELPVK 273 (502)
T ss_pred EcCHHHhcCHHHHHHH----------HHHcCCeEEEEChhHHHHHHhcc--------ccccccCCcccEEEEcCCcCCHH
Confidence 9875 467888888 78899999999999998776541 11234578999999999999999
Q ss_pred HHHHHHHHh-CCcccccccCCcCccccc
Q 018211 319 VMQQWETIT-GHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 319 ~~~~~~~~~-~~~v~~~YG~TE~g~~~~ 345 (359)
+.+++.+.+ ++++++.||+||+++.++
T Consensus 274 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~ 301 (502)
T TIGR01734 274 TAKALLERFPKATIYNTYGPTEATVAVT 301 (502)
T ss_pred HHHHHHHHCCCcEEEeCccCCcceEEEE
Confidence 999999988 899999999999986544
No 85
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.7e-38 Score=307.92 Aligned_cols=314 Identities=20% Similarity=0.282 Sum_probs=243.9
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.|.+.++.+|+++|+.+.++.+||.||.++++++|+.|.+. .|+++||+|+++++|+++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~gi~~gd~V~i~~~n~~e 87 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQH----------------TDLVPGDRIAVQMPNVLQ 87 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHH
Confidence 3678889999999999999999889999999999999999999872 399999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCC----CCC--------
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPP----VPN-------- 148 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------- 148 (359)
+++++|||+++|++++++++..+.+++.++++++++++++++....+.+................ .+.
T Consensus 88 ~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
T PRK12492 88 YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNT 167 (562)
T ss_pred HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhccc
Confidence 99999999999999999999999999999999999999999876544443322211100000000 000
Q ss_pred -------------CCC---ccccccc-ch-hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc---
Q 018211 149 -------------VSS---ETTVFDQ-SQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--- 207 (359)
Q Consensus 149 -------------~~~---~~~~~~~-~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--- 207 (359)
... ....... .. .........+++++|+|||||||.||||.++|+++..++......+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~ 247 (562)
T PRK12492 168 VVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLG 247 (562)
T ss_pred ccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccc
Confidence 000 0000000 00 00112345578999999999999999999999999887766555442
Q ss_pred ------cCC-CceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHH
Q 018211 208 ------YTS-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (359)
Q Consensus 208 ------~~~-~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~ 279 (359)
+.. +++++..+|++|.+++...++..+..|.+.++.. .+++..+++. ++++++|++..+|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~ 317 (562)
T PRK12492 248 PDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKE----------LGKWRFSALLGLNTL 317 (562)
T ss_pred ccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHH----------HHHhCCceeeCcHHH
Confidence 222 3577899999999998766777788888777664 4678888888 889999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 280 YTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
+..+.+... ....+++++|.+++||+++++++.+.|.+.+|+++++.||+||++++++.+.
T Consensus 318 ~~~l~~~~~--------~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 378 (562)
T PRK12492 318 FVALMDHPG--------FKDLDFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNP 378 (562)
T ss_pred HHHHHhCcC--------cccccccceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecC
Confidence 999887532 1234578999999999999999999999988999999999999998766543
No 86
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.4e-38 Score=308.52 Aligned_cols=298 Identities=19% Similarity=0.239 Sum_probs=228.7
Q ss_pred Ch-HHHHHHHcCCCCCCceEEeeCC----ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc
Q 018211 1 ME-VFKAAYKKGSMARDSVAIRADQ----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (359)
Q Consensus 1 m~-i~~~l~~~a~~~p~~~ai~~~~----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~ 75 (359)
|| +.+.|.+.++.+|+++|+++.+ +++||+||.++++++|..|.+ + ++||+|++++
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-----------------~--~~g~~V~l~~ 61 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-----------------R--DRPGAVGLVG 61 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-----------------c--CCCCeEEEEc
Confidence 78 8899999999999999999875 889999999999999999988 4 7999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeeeecCCC-------CCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCC
Q 018211 76 KPSFEFVAGVLGTWFSGCIAVPLALS-------YPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN 148 (359)
Q Consensus 76 ~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (359)
+|+++++++++|++++|+++++++.. ...+++.++++++++++++++....+.+...... . .+.....
T Consensus 62 ~~~~e~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~----~-~~~~~~~ 136 (525)
T PRK05851 62 EPTVELVAAIQGAWLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS----V-TVHDLAT 136 (525)
T ss_pred CCCHHHHHHHHHHHHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc----c-ccccccc
Confidence 99999999999999999986543211 2234556678999999999987655444332111 0 0100000
Q ss_pred CCCcccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccC-CCceEEEecCchhhHHHH
Q 018211 149 VSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT-SADQFLHCLPLHHVHGLF 227 (359)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~-~~d~~l~~~pl~h~~~~~ 227 (359)
..............++++++|+|||||||.||||+++|.++...+......+++. ++|++++.+|++|.+++.
T Consensus 137 ------~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 210 (525)
T PRK05851 137 ------AAHTNRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLA 210 (525)
T ss_pred ------cccccccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHH
Confidence 0000000011123568999999999999999999999999999988888888888 899999999999999996
Q ss_pred HHHHHhhhcCcEEEEcCC--C--ChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhc
Q 018211 228 NALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK 303 (359)
Q Consensus 228 ~~~~~~l~~G~~i~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 303 (359)
.++.+++.|+++++.+. + ++..+++. +.++++|++..+|.++..+.+... .....+++
T Consensus 211 -~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~p~~~~~~l~~~~~-------~~~~~~l~ 272 (525)
T PRK05851 211 -FLLTAALAGAPLWLAPTTAFSASPFRWLSW----------LSDSRATLTAAPNFAYNLIGKYAR-------RVSDVDLG 272 (525)
T ss_pred -HHHHHHHcCCeEEEcCHHHHHHCHHHHHHH----------HHHhCCeEEeCCcHHHHHHHHhhc-------cccCCCHH
Confidence 57889999999999873 4 56678887 788999987655554444433211 11224578
Q ss_pred cceEEEecCCCCCHHHHHHHHHH---hCC---cccccccCCcCcccccc
Q 018211 304 QLRLMMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEGCTKGRH 346 (359)
Q Consensus 304 ~l~~i~~~G~~l~~~~~~~~~~~---~~~---~v~~~YG~TE~g~~~~~ 346 (359)
+||.+++||+++++++.++|.+. +|. ++++.||+||++..++.
T Consensus 273 ~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~ 321 (525)
T PRK05851 273 ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTV 321 (525)
T ss_pred HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEe
Confidence 89999999999999999999875 454 49999999999865543
No 87
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.9e-38 Score=308.99 Aligned_cols=310 Identities=25% Similarity=0.394 Sum_probs=242.8
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.+.+.+..+|+++|+++.++.+||.||.+++.++|..|.+ .|+++||+|+++++|++++
T Consensus 25 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~-----------------~gv~~gd~V~i~~~~~~~~ 87 (563)
T PRK06710 25 PLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQK-----------------LGVEKGDRVAIMLPNCPQA 87 (563)
T ss_pred cHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChHH
Confidence 57788889999999999999999999999999999999999998 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCC-----------
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS----------- 150 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 150 (359)
++++|||+++|++++|+++..+.+++.++++.++++.+++++.....+.............+.......
T Consensus 88 ~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (563)
T PRK06710 88 VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFV 167 (563)
T ss_pred HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchh
Confidence 999999999999999999999999999999999999999987655443332211111111110000000
Q ss_pred ------------Cc------ccccccchhh-hcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH-hhccC-
Q 018211 151 ------------SE------TTVFDQSQAE-KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYT- 209 (359)
Q Consensus 151 ------------~~------~~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~- 209 (359)
.. .......... .......+++++++|||||||.||+|.++|+++..+...... .++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 247 (563)
T PRK06710 168 QKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKE 247 (563)
T ss_pred hcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCC
Confidence 00 0000000000 011123478999999999999999999999999765433322 23333
Q ss_pred CCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhh
Q 018211 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (359)
Q Consensus 210 ~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 289 (359)
.++++++..|++|.+++...++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+....
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~ 317 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEA----------IKKHKVTLFPGAPTIYIALLNSPLL 317 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcCCcc
Confidence 456889999999999987667778999999999998999999988 8889999999999999998875221
Q ss_pred hhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccc
Q 018211 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 290 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
...+++++|.+++||+++++++.+++.+.+|+++++.||+||++++...
T Consensus 318 --------~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 366 (563)
T PRK06710 318 --------KEYDISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHS 366 (563)
T ss_pred --------ccCChhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCcccccc
Confidence 1234678999999999999999999999889999999999999876543
No 88
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-38 Score=303.40 Aligned_cols=290 Identities=20% Similarity=0.277 Sum_probs=236.3
Q ss_pred HHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHH
Q 018211 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (359)
Q Consensus 8 ~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (359)
..+++.+|+++|+.+ +++.+||.||.++++++|..|.+ .|+.+||+|+++++|++++++++
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-----------------~g~~~~~~v~i~~~~~~~~~~~~ 64 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-----------------RGCVDGERLAVLARNSVWLVALH 64 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHHHHH
Confidence 356778999999986 67899999999999999999998 79999999999999999999999
Q ss_pred HHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchhhhcC
Q 018211 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (359)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
||++++|++++|+++..+.+++.+++++++++++++++...... .....+..... ...........
T Consensus 65 la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------~~~~~~~~~~~------~~~~~~~~~~~ 130 (488)
T PRK09088 65 FACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR--------TDVEDLAAFIA------SADALEPADTP 130 (488)
T ss_pred HHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc--------ccccchhhhhh------hccccccccCC
Confidence 99999999999999999999999999999999999986432210 00000000000 00000001112
Q ss_pred CCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC
Q 018211 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (359)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~ 245 (359)
....+++++++|||||||.||+|.++|+++...+..+........+|++++.+|++|.+++...+..++..|+++++.+.
T Consensus 131 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~ 210 (488)
T PRK09088 131 SIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNG 210 (488)
T ss_pred CCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCC
Confidence 33457899999999999999999999999998877777777788899999999999999998778889999999999998
Q ss_pred CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHH
Q 018211 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWET 325 (359)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~ 325 (359)
+++..++..+. ..++++|++..+|.+++.+..... .....+++||.+++||++++.+..+++.+
T Consensus 211 ~~~~~~~~~~~--------~~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gG~~~~~~~~~~~~~ 274 (488)
T PRK09088 211 FEPKRTLGRLG--------DPALGITHYFCVPQMAQAFRAQPG--------FDAAALRHLTALFTGGAPHAAEDILGWLD 274 (488)
T ss_pred CCHHHHHHHHH--------hhccCCcEEeeHHHHHHHHHhCcC--------cCccccccceEEEecCCCCCHHHHHHHHH
Confidence 89988888732 135899999999999998876521 11234678999999999999999888886
Q ss_pred HhCCcccccccCCcCccccc
Q 018211 326 ITGHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 326 ~~~~~v~~~YG~TE~g~~~~ 345 (359)
. |+++++.||+||+|++..
T Consensus 275 ~-g~~v~~~YG~TE~~~~~~ 293 (488)
T PRK09088 275 D-GIPMVDGFGMSEAGTVFG 293 (488)
T ss_pred h-CCceeeeecccccccccc
Confidence 5 999999999999997643
No 89
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.5e-38 Score=360.47 Aligned_cols=301 Identities=25% Similarity=0.373 Sum_probs=251.3
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++++.+|+++|++++++.+||+||.++++++|..|.+ +|+++|++|+++++|++++
T Consensus 1575 ~~~~~~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~-----------------~Gv~~~~~V~l~~~~s~~~ 1637 (3956)
T PRK12467 1575 LVHQLIEDQAAATPEAVALVFGEQELTYGELNRRANRLAHRLIA-----------------LGVGPEVLVGIAVERSLEM 1637 (3956)
T ss_pred cHHHHHHHHHHhCCCCeEEEeCCcEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEccCCHHH
Confidence 47788999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchh
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
++++||++++|++++|+++.++.+++.++++++++++++++......+... .......++..... .......
T Consensus 1638 vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~ 1709 (3956)
T PRK12467 1638 VVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP---DGLRSLVLDQEDDW-----LEGYSDS 1709 (3956)
T ss_pred HHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc---cCCcEEEeccccch-----hccCCCC
Confidence 999999999999999999999999999999999999999987654332211 11112222111100 0001111
Q ss_pred hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEE
Q 018211 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~ 241 (359)
.......++++++|+|||||||.||||+++|+++.+.+......++++++|+++...|++|+++++ .++.+|+.|++++
T Consensus 1710 ~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 1788 (3956)
T PRK12467 1710 NPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVW-ELFWPLINGARLV 1788 (3956)
T ss_pred CCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHH-HHHHHHhCCCEEE
Confidence 122334578999999999999999999999999999999888889999999999999999999985 6899999999999
Q ss_pred EcCC---CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHH
Q 018211 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (359)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~ 318 (359)
+.+. .++..+++. ++++++|++.++|++++.+.+... ....+++||.+++||++++++
T Consensus 1789 i~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~~---------~~~~~~~lr~v~~gGe~l~~~ 1849 (3956)
T PRK12467 1789 IAPPGAHRDPEQLIQL----------IERQQVTTLHFVPSMLQQLLQMDE---------QVEHPLSLRRVVCGGEALEVE 1849 (3956)
T ss_pred EcChhhcCCHHHHHHH----------HHHcCCeEEECCHHHHHHHHhhcc---------ccccCCCceEEEEccccCCHH
Confidence 9874 468888888 888999999999999999886411 123468899999999999999
Q ss_pred HHHHHHHHh-CCcccccccCCcCccccccc
Q 018211 319 VMQQWETIT-GHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 319 ~~~~~~~~~-~~~v~~~YG~TE~g~~~~~~ 347 (359)
+.+.|.+.+ +.+++|.||+||+++.++..
T Consensus 1850 ~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~ 1879 (3956)
T PRK12467 1850 ALRPWLERLPDTGLFNLYGPTETAVDVTHW 1879 (3956)
T ss_pred HHHHHHHhCCCCeEEeCccCCcCEEeEEEE
Confidence 999999887 57899999999999766543
No 90
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.2e-37 Score=310.54 Aligned_cols=305 Identities=15% Similarity=0.139 Sum_probs=228.9
Q ss_pred hHHHHHHHcCCCCCCceEEeeCC-----ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
|+.+.+.++ +++++|+++.+ +++||+||.+++.++|..|.+ +|+++||+|+++++
T Consensus 88 n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrV~i~~~ 147 (652)
T TIGR01217 88 NYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-----------------LGVRPGDRVSGYLP 147 (652)
T ss_pred eHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 555666553 46889988732 589999999999999999999 79999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc---------HHHHHHHhhhcCC--ceeccCC
Q 018211 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSGA--KFSLIPP 145 (359)
Q Consensus 77 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~--~~~~~~~ 145 (359)
|++++++++|||+++|++++|+++.++.+++.+++++++++++|++... .+.+.+.....+. ..+.+..
T Consensus 148 n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (652)
T TIGR01217 148 NIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPY 227 (652)
T ss_pred CCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeC
Confidence 9999999999999999999999999999999999999999999997643 2333333332221 1222211
Q ss_pred CC----------CCCCccccccc--chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHH-HHHHHHHhhccCCCc
Q 018211 146 VP----------NVSSETTVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSAD 212 (359)
Q Consensus 146 ~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~d 212 (359)
.. ......+.... ...........+++++|+|||||||.||||+++|.+++. ........+++.++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d 307 (652)
T TIGR01217 228 LGPRETEAPKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGD 307 (652)
T ss_pred CCCcccccccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCc
Confidence 00 00000111000 000011223458999999999999999999999998654 444455567888999
Q ss_pred eEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhh
Q 018211 213 QFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (359)
Q Consensus 213 ~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 288 (359)
++++..|+.|.++. .++.+|+.|+++++.+. .++..+++. ++++++|++..+|.+++.+.+...
T Consensus 308 ~~~~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~~~ 375 (652)
T TIGR01217 308 RLFYYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDI----------AERTGATLFGTSAKYVMACRKAGV 375 (652)
T ss_pred EEEEeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHH----------HHHhCCeEEecCHHHHHHHHhcCC
Confidence 99999999998643 35688999999999863 267788888 889999999888887776654210
Q ss_pred hhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC--CcccccccCCcCcccc
Q 018211 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG--HRLLERYGMTEGCTKG 344 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~--~~v~~~YG~TE~g~~~ 344 (359)
......++++||.+++||+++++++.+++.+.++ +.+.+.||+||+++..
T Consensus 376 ------~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~ 427 (652)
T TIGR01217 376 ------HPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCF 427 (652)
T ss_pred ------CccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccc
Confidence 0112356899999999999999999999998885 4677899999975443
No 91
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=9.9e-38 Score=306.67 Aligned_cols=313 Identities=21% Similarity=0.297 Sum_probs=244.9
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.+.++.+|+++|+++.++++||+||.++++++|..|.++ .|+++||+|+++++|++++
T Consensus 26 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 89 (560)
T PRK08751 26 TVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGE----------------LQLKKGDRVALMMPNCLQY 89 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHHH
Confidence 467889999999999999999999999999999999999999632 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCC-------------
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN------------- 148 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 148 (359)
+++++||+++|++++|++|.++.+++.++++++++++++++......+.......+....+......
T Consensus 90 ~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (560)
T PRK08751 90 PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFV 169 (560)
T ss_pred HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhh
Confidence 9999999999999999999999999999999999999999887665555443322221111110000
Q ss_pred ----------C--CCc---ccccccch--hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc----
Q 018211 149 ----------V--SSE---TTVFDQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---- 207 (359)
Q Consensus 149 ----------~--~~~---~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~---- 207 (359)
. ... ........ ........++++++++|||||||.||+|.++|.++...+......++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 249 (560)
T PRK08751 170 VKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGK 249 (560)
T ss_pred hhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccc
Confidence 0 000 00000000 00112345688999999999999999999999999887776555443
Q ss_pred cCC-CceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHh
Q 018211 208 YTS-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285 (359)
Q Consensus 208 ~~~-~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 285 (359)
..+ +++++...|++|.+++....+..+..|++.++.. .+++..+++. +.++++|++..+|.++..+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~ 319 (560)
T PRK08751 250 LEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKE----------LKKTRFTAFTGVNTLFNGLLN 319 (560)
T ss_pred cCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHH----------HHhcceeEecChHHHHHHHHc
Confidence 233 4677889999999998666666777777776654 5688888888 889999999999999999887
Q ss_pred hhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 286 GYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
... ..+.+++++|.+++||+++++.+.+.|++.+|+++++.||+||+++.++.+.
T Consensus 320 ~~~--------~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 374 (560)
T PRK08751 320 TPG--------FDQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINP 374 (560)
T ss_pred CcC--------cCCcchhhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceeccc
Confidence 522 1224577899999999999999999999988999999999999998765543
No 92
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-37 Score=305.24 Aligned_cols=312 Identities=22% Similarity=0.304 Sum_probs=244.5
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.+.++.+|+++|+++.++.+||.||.++++++|..|.+ .|+++||+|+++++|++++
T Consensus 24 ~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~-----------------~gi~~gd~V~i~~~n~~~~ 86 (557)
T PRK07059 24 SLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQS-----------------RGLAKGARVAIMMPNVLQY 86 (557)
T ss_pred CHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCHHH
Confidence 58899999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCC------------
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV------------ 149 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 149 (359)
+++++|++++|++++|+++..+.+++.++++.++++++++++.....+.............+......
T Consensus 87 ~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (557)
T PRK07059 87 PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVV 166 (557)
T ss_pred HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccc
Confidence 99999999999999999999999999999999999999998876655544432222111111100000
Q ss_pred ------------CCcc---ccccc--chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh----cc
Q 018211 150 ------------SSET---TVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EY 208 (359)
Q Consensus 150 ------------~~~~---~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~ 208 (359)
.... ..... ..........++++++|+|||||||.||+|.++|.+++.++......+ ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 246 (557)
T PRK07059 167 RRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEK 246 (557)
T ss_pred ccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccc
Confidence 0000 00000 000112334568999999999999999999999999987654433221 11
Q ss_pred ---CCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHH
Q 018211 209 ---TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 209 ---~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 284 (359)
...+.+++.+|++|.+++....+.++..|++.++.+. .++..+++. ++++++|.+..+|.++..+.
T Consensus 247 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~ 316 (557)
T PRK07059 247 KPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKE----------LKKYQVHIFPAVNTLYNALL 316 (557)
T ss_pred cCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHH----------HHHhCCeeeecCHHHHHHHH
Confidence 1245778899999998876677778888888777664 578888888 88899999999999999988
Q ss_pred hhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 285 QGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
.... ....+++++|.++.||+++++.+.++|.+.+|+++++.||+||++.+++...
T Consensus 317 ~~~~--------~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 372 (557)
T PRK07059 317 NNPD--------FDKLDFSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNP 372 (557)
T ss_pred cCcC--------cCcCCchhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCC
Confidence 7632 1223567899999999999999999999989999999999999998765543
No 93
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-37 Score=303.05 Aligned_cols=310 Identities=18% Similarity=0.245 Sum_probs=242.8
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
|++.+.|.+.++.+|+++|+.+.+..+||+||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~-----------------~g~~~g~~v~i~~~~~~~ 80 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALAR-----------------RGIGRGDTVAVLLPNIPA 80 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCchH
Confidence 567889999999999999999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCc-eeccCCCCCC-C--------
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNV-S-------- 150 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-------- 150 (359)
+++++||++++|++++|++++.+.+++..++++++++.++++.+..+.+.+.....+.. ...+...... .
T Consensus 81 ~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (545)
T PRK08162 81 MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGAL 160 (545)
T ss_pred HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccc
Confidence 99999999999999999999999999999999999999999988776665543332221 2222111100 0
Q ss_pred Ccccccccc-hh-hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHH
Q 018211 151 SETTVFDQS-QA-EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (359)
Q Consensus 151 ~~~~~~~~~-~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 228 (359)
......... +. ......+.+++++|+|||||||.||||+++|.++...+......+++..++++++.+|++|..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~ 240 (545)
T PRK08162 161 DYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCF 240 (545)
T ss_pred cHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHH
Confidence 000000000 00 0111223457899999999999999999999998777666666677888899999999999998865
Q ss_pred HHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEE
Q 018211 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (359)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i 308 (359)
.++..+ .|++.++...+++..+++. ++++++|++.++|.++..+.+.... ....+.+.+.+
T Consensus 241 ~~~~~~-~~g~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~~~~~ 301 (545)
T PRK08162 241 PWTVAA-RAGTNVCLRKVDPKLIFDL----------IREHGVTHYCGAPIVLSALINAPAE--------WRAGIDHPVHA 301 (545)
T ss_pred HHHHHH-HccEEEEeCCCCHHHHHHH----------HHHcCCeEEEechHHHHHHHhCccc--------cccCCccceEE
Confidence 444444 5666666677899999999 8889999999999999999875221 11123456677
Q ss_pred EecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 309 MCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 309 ~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++|+++++++.+.+.+ +++++++.||+||+++.+..+
T Consensus 302 ~~~g~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~ 339 (545)
T PRK08162 302 MVAGAAPPAAVIAKMEE-IGFDLTHVYGLTETYGPATVC 339 (545)
T ss_pred EECCCCCCHHHHHHHHH-hCCceeecccccccCcceeec
Confidence 89999999999998876 599999999999997655443
No 94
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=7.8e-38 Score=303.36 Aligned_cols=299 Identities=19% Similarity=0.259 Sum_probs=247.4
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
||+.+.|.+.++.+|+++|+...++++||.||.++++++|..|.+ .|+++|++|+++++|+.+
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~-----------------~g~~~~~~v~~~~~~~~~ 64 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDS-----------------LKLPDKSPIIVFGHMSPE 64 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHH
Confidence 789999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccch
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (359)
++++++|++++|++++|+++.++.+++..+++..++++++++.+.... ........... ...... ....
T Consensus 65 ~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~--~~~~ 133 (503)
T PRK04813 65 MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLE------ILGIPVITLDE---LKDIFA--TGNP 133 (503)
T ss_pred HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccc------ccCCcEEehHH---hhhhhh--cccc
Confidence 999999999999999999999999999999999999999998754100 00001111000 000000 0001
Q ss_pred hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEE
Q 018211 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i 240 (359)
........++++++++|||||||.||+|.++|+++...+......+++..+++++...|++|..++. .++.++..|+++
T Consensus 134 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~ 212 (503)
T PRK04813 134 YDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVM-DLYPTLASGGTL 212 (503)
T ss_pred ccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHH-HHHHHHhcCCEE
Confidence 1112234568899999999999999999999999999888878888888999999999999999885 578899999999
Q ss_pred EEcCC---CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCH
Q 018211 241 EFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (359)
Q Consensus 241 ~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~ 317 (359)
++.+. +++..+++. ++++++|++..+|++++.+.... ...+.+++++|.++++|+++++
T Consensus 213 v~~~~~~~~~~~~~~~~----------~~~~~~t~~~~~p~~~~~~~~~~--------~~~~~~~~~l~~i~~~G~~l~~ 274 (503)
T PRK04813 213 VALPKDMTANFKQLFET----------LPQLPINVWVSTPSFADMCLLDP--------SFNEEHLPNLTHFLFCGEELPH 274 (503)
T ss_pred EEcChhhhcCHHHHHHH----------HHHcCCeEEEeChHHHHHHHHhh--------ccCcccCCCceEEEEecCcCCH
Confidence 99885 477888888 78899999999999998766541 1223467899999999999999
Q ss_pred HHHHHHHHHh-CCcccccccCCcCcccccc
Q 018211 318 PVMQQWETIT-GHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 318 ~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~ 346 (359)
++.+++.+.+ +.++++.||+||+|..++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~ 304 (503)
T PRK04813 275 KTAKKLLERFPSATIYNTYGPTEATVAVTS 304 (503)
T ss_pred HHHHHHHHHCCCceEEeCcccchheeEEEE
Confidence 9999999998 7899999999999865443
No 95
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-37 Score=305.61 Aligned_cols=310 Identities=21% Similarity=0.259 Sum_probs=248.6
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.|.++++.+|+++|+.+.++.+||.||.++++++|..|.+ .|+++|++|+++++|+++
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~-----------------~g~~~g~~V~i~~~n~~~ 95 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQ-----------------RGVGAGDRVAVFLPNCPQ 95 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCcH
Confidence 467889999999999999999999999999999999999999998 699999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCc--------
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSE-------- 152 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 152 (359)
++++++|++++|++++|+++..+.+++.+++++++++++++++...+.+....+......+.+.........
T Consensus 96 ~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 175 (567)
T PRK06178 96 FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPD 175 (567)
T ss_pred HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccc
Confidence 999999999999999999999999999999999999999999887776666544332222221111000000
Q ss_pred ------------cccccc----chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH-hhccCCCceEE
Q 018211 153 ------------TTVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFL 215 (359)
Q Consensus 153 ------------~~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~d~~l 215 (359)
.+.... ..........++++++|+|||||||.||+|.+||.+++........ .....++|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l 255 (567)
T PRK06178 176 SLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFL 255 (567)
T ss_pred ccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEE
Confidence 000000 0001112345689999999999999999999999999876655443 35677899999
Q ss_pred EecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHH
Q 018211 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQ 295 (359)
Q Consensus 216 ~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 295 (359)
..+|++|..|+..+++.++..|+++++.+.+++..++.. ++++++|.+.++|..+..+.+...
T Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~l~~~~~------- 318 (567)
T PRK06178 256 SFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAA----------VERYRVTRTVMLVDNAVELMDHPR------- 318 (567)
T ss_pred EecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCC-------
Confidence 999999999987778889999999999999999999999 888999999999999998876521
Q ss_pred HHHHhhhccceEEEe--cCCCCCHHHHHHHHHHhCCcccc-cccCCcCccccc
Q 018211 296 AASASAAKQLRLMMC--GSSALPLPVMQQWETITGHRLLE-RYGMTEGCTKGR 345 (359)
Q Consensus 296 ~~~~~~~~~l~~i~~--~G~~l~~~~~~~~~~~~~~~v~~-~YG~TE~g~~~~ 345 (359)
....++++++.+.. .|+.+++++.+.|++.+|..++. .||+||+++.+.
T Consensus 319 -~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~ 370 (567)
T PRK06178 319 -FAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDT 370 (567)
T ss_pred -CCCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccce
Confidence 11234567787644 45899999999999999887775 799999986543
No 96
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.5e-38 Score=361.57 Aligned_cols=300 Identities=19% Similarity=0.296 Sum_probs=252.9
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.+.++++.+|+++|+++.+..+||+||.++++++|..|.+ +|+++|++|+|++++++++
T Consensus 3721 ~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~-----------------~gv~~~~~V~v~~~~s~~~ 3783 (4334)
T PRK05691 3721 SYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRA-----------------AGVGVDQPVALLAERGLDL 3783 (4334)
T ss_pred CHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 46788999999999999999999999999999999999999998 7999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCC----ceeccCCCCCCCCcccccc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA----KFSLIPPVPNVSSETTVFD 157 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 157 (359)
+++++|++++|+++||+++.++.+++.++++++++++++++.........+...... ........ ....
T Consensus 3784 ~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 3856 (4334)
T PRK05691 3784 LGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEV-------QAGE 3856 (4334)
T ss_pred HHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeeccc-------cccc
Confidence 999999999999999999999999999999999999999998765544333222111 11111100 0000
Q ss_pred cchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcC
Q 018211 158 QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (359)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G 237 (359)
...........++++++|+|||||||.||||+++|+++++.+......++++++|+++...+++|+.+++ .++.+|+.|
T Consensus 3857 ~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~-~~~~~l~~G 3935 (4334)
T PRK05691 3857 VASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVW-QFLAAPLFG 3935 (4334)
T ss_pred ccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHH-HHHHHHhCC
Confidence 0011122334678999999999999999999999999999999988999999999999999999999985 699999999
Q ss_pred cEEEEcCC---CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCC
Q 018211 238 ATVEFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (359)
Q Consensus 238 ~~i~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~ 314 (359)
+++++.+. .++..+++. ++++++|++.++|++++.++.. ....+++||.+++||++
T Consensus 3936 ~~l~i~~~~~~~~~~~l~~~----------~~~~~vt~~~~~Ps~~~~l~~~-----------~~~~~~~lr~~~~gGe~ 3994 (4334)
T PRK05691 3936 ARVEIVPNAIAHDPQGLLAH----------VQAQGITVLESVPSLIQGMLAE-----------DRQALDGLRWMLPTGEA 3994 (4334)
T ss_pred CEEEEcCccccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhh-----------ccccCCCceEEEecCCc
Confidence 99999874 467888888 8889999999999999988753 11346789999999999
Q ss_pred CCHHHHHHHHHHh-CCcccccccCCcCccccccc
Q 018211 315 LPLPVMQQWETIT-GHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 315 l~~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++++.++|.+.+ +++++|.||+||++..++..
T Consensus 3995 l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~ 4028 (4334)
T PRK05691 3995 MPPELARQWLQRYPQIGLVNAYGPAECSDDVAFF 4028 (4334)
T ss_pred CCHHHHHHHHHhCCCCeEEeCccCccceeEEEEE
Confidence 9999999998876 78999999999999866544
No 97
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=5.7e-38 Score=363.89 Aligned_cols=300 Identities=24% Similarity=0.310 Sum_probs=251.0
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++++.+|+++|++++++.+||+||.++++++|..|.+ .|+++|++|+++++|++++
T Consensus 2004 ~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~-----------------~gv~~g~~V~l~~~~s~~~ 2066 (5163)
T PRK12316 2004 GVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRA-----------------RGVGPEVRVAIAAERSFEL 2066 (5163)
T ss_pred CHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 57889999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchh
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
++++|||+++|++++|+++.++.+++.++++++++++++++.+....+... .......+... .........
T Consensus 2067 ~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~ 2137 (5163)
T PRK12316 2067 VVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP---AGVARLPLDRD------AEWADYPDT 2137 (5163)
T ss_pred HHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc---cccceEeccch------hhhhccCcc
Confidence 999999999999999999999999999999999999999987654432110 01111111110 001111111
Q ss_pred hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEE
Q 018211 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~ 241 (359)
.......++++++|+|||||||.||||+++|+++.+.+......++++++|+++.+.|++|+.+++ .++.+|+.|++++
T Consensus 2138 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~~~ 2216 (5163)
T PRK12316 2138 APAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHE-QWFHPLLNGARVL 2216 (5163)
T ss_pred CCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHH-HHHHHHhCCCEEE
Confidence 122345679999999999999999999999999999999989999999999999999999998885 6999999999998
Q ss_pred EcCC--CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+.+. +++..+++. ++++++|++.++|++++.+.+... ......+||.+++||+++++++
T Consensus 2217 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~---------~~~~~~~lr~~~~gGe~l~~~~ 2277 (5163)
T PRK12316 2217 IRDDELWDPEQLYDE----------MERHGVTILDFPPVYLQQLAEHAE---------RDGRPPAVRVYCFGGEAVPAAS 2277 (5163)
T ss_pred eCCcccCCHHHHHHH----------HHHcCCeEEEcChHHHHHHHhhhh---------cccCCcceeEEEEecccCCHHH
Confidence 8763 678889998 889999999999999999876521 1122348999999999999999
Q ss_pred HHHHHHHh-CCcccccccCCcCccccccc
Q 018211 320 MQQWETIT-GHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~TE~g~~~~~~ 347 (359)
.++|.+.+ +.+++|.||+||++..++..
T Consensus 2278 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~ 2306 (5163)
T PRK12316 2278 LRLAWEALRPVYLFNGYGPTEAVVTPLLW 2306 (5163)
T ss_pred HHHHHHhCCCcEEEECccchhheeeeeee
Confidence 99999877 68999999999998765543
No 98
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-37 Score=307.22 Aligned_cols=303 Identities=18% Similarity=0.255 Sum_probs=233.8
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCC---------ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeE
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQ---------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~---------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V 71 (359)
|++.+.|.+++..+|+++|+++.+ +++||.||.++++++|..|.+ .| .+||+|
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~-----------------~g-~~gd~V 62 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRR-----------------HG-STGDRA 62 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHH-----------------hC-CCCCEE
Confidence 789999999999999999998632 689999999999999999998 67 689999
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeeeecCC---CCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC---C-ceeccC
Q 018211 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLAL---SYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG---A-KFSLIP 144 (359)
Q Consensus 72 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~-~~~~~~ 144 (359)
+++++|+++++++++||+++|++++|+++ ..+.+++.++++++++++++++.+..+.+........ . .+..++
T Consensus 63 ~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (578)
T PRK05850 63 VILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD 142 (578)
T ss_pred EEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec
Confidence 99999999999999999999999999997 4578899999999999999999877665554322111 0 111111
Q ss_pred CCCCCCCcccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh-c-----cCCCceEEEec
Q 018211 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-E-----YTSADQFLHCL 218 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~-----~~~~d~~l~~~ 218 (359)
... .... .........++++++|+|||||||.||||.++|.+++.++......+ . ...++++++++
T Consensus 143 ~~~-------~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (578)
T PRK05850 143 LLD-------LDSP-RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWL 214 (578)
T ss_pred ccc-------cccC-CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEEC
Confidence 100 0000 00111234568999999999999999999999999998776654432 2 34678999999
Q ss_pred CchhhHHHHHHHHHhhhcCcEEEEcCCC----ChhHHHHHHHhhcCCCCCCCCCcceeeecchHHH-HHHHhhhhhhhHH
Q 018211 219 PLHHVHGLFNALLAPLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY-TRLIQGYEAMDTE 293 (359)
Q Consensus 219 pl~h~~~~~~~~~~~l~~G~~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~-~~l~~~~~~~~~~ 293 (359)
|++|..|++..++.++..|+++++.+.+ ++..+++. +.+++++.. .+|.++ ..+......
T Consensus 215 pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~----------i~~~~~~~~-~~p~~~~~~~~~~~~~---- 279 (578)
T PRK05850 215 PFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQL----------LASNPHAFS-AAPNFAFELAVRKTSD---- 279 (578)
T ss_pred CCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHH----------HHHcCCeEE-eCCcHHHHHHHHhcch----
Confidence 9999999987899999999999998743 57788877 788898865 556554 333322100
Q ss_pred HHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC------CcccccccCCcCccccc
Q 018211 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEGCTKGR 345 (359)
Q Consensus 294 ~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~------~~v~~~YG~TE~g~~~~ 345 (359)
......+++++|.+++||+++++++.++|.+.|+ ..+++.||+||++..+.
T Consensus 280 -~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 336 (578)
T PRK05850 280 -DDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVA 336 (578)
T ss_pred -hhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhhee
Confidence 0112235678999999999999999999988873 36999999999886544
No 99
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=7.6e-38 Score=362.86 Aligned_cols=301 Identities=23% Similarity=0.289 Sum_probs=252.3
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++++.+|+++|++++++++||+||.++++++|..|.+ +|+++|++|+|+++|++++
T Consensus 4552 ~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~~~~lA~~L~~-----------------~gv~~g~~V~i~~~~s~~~ 4614 (5163)
T PRK12316 4552 CVHQLVAERARMTPDAVAVVFDEEKLTYAELNRRANRLAHALIA-----------------RGVGPEVLVGIAMERSAEM 4614 (5163)
T ss_pred cHHHHHHHHHHhCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 46788999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchh
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
++++|||+++|++++|+++.++.+++.+++++++++++|++....+.+... .......++..... ......
T Consensus 4615 iv~~lavl~aG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~~ 4685 (5163)
T PRK12316 4615 MVGLLAVLKAGGAYVPLDPEYPRERLAYMMEDSGAALLLTQSHLLQRLPIP---DGLASLALDRDEDW------EGFPAH 4685 (5163)
T ss_pred HHHHHHHHHhCcEEecCCCCChHHHHHHHHHhcCCCEEEechhhhhhcccc---cCcceEeecchhhc------ccCCcc
Confidence 999999999999999999999999999999999999999987654433110 01111111111100 001111
Q ss_pred hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEE
Q 018211 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~ 241 (359)
.......++++++|+|||||||.||||+++|+++++.+......++++++|++++..|++|+.+.+ .++.+|..|++++
T Consensus 4686 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 4764 (5163)
T PRK12316 4686 DPAVRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPDDRVLQFMSFSFDGSHE-GLYHPLINGASVV 4764 (5163)
T ss_pred CCccCCCCCceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHHhcCCCcCCeEEEecCcchhhHHH-HHHHHHhCCCEEE
Confidence 122344678999999999999999999999999999999988899999999999999999999985 6899999999999
Q ss_pred EcCC--CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++. +++..+++. ++++++|++.++|++++.+.+... ...++++||.+++||+++++++
T Consensus 4765 i~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~~---------~~~~~~~lr~v~~gGe~l~~~~ 4825 (5163)
T PRK12316 4765 IRDDSLWDPERLYAE----------IHEHRVTVLVFPPVYLQQLAEHAE---------RDGEPPSLRVYCFGGEAVAQAS 4825 (5163)
T ss_pred EcCcccCCHHHHHHH----------HHHcCCEEEEcCHHHHHHHHhhhc---------cccCCCCccEEEEecccCCHHH
Confidence 9874 378888888 888999999999999999887521 1125789999999999999999
Q ss_pred HHHHHHHh-CCcccccccCCcCcccccccc
Q 018211 320 MQQWETIT-GHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~TE~g~~~~~~~ 348 (359)
.++|.+.+ ++++++.||+||+++.++...
T Consensus 4826 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 4855 (5163)
T PRK12316 4826 YDLAWRALKPVYLFNGYGPTETTVTVLLWK 4855 (5163)
T ss_pred HHHHHHhCCCCEEEecccCccceEEEEEEE
Confidence 98888776 789999999999998765543
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.3e-37 Score=326.90 Aligned_cols=308 Identities=20% Similarity=0.308 Sum_probs=244.4
Q ss_pred hHHHHHHHcCCCCC-CceEEee-CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSMAR-DSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~~p-~~~ai~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
++.+.+.+.++++| ++.|+.+ +++++||+||.++++++|+.|.+ |+++||+|+++++|++
T Consensus 632 ~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~------------------g~~~gd~V~i~~~n~~ 693 (1140)
T PRK06814 632 TLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK------------------NTPPGENVGVMLPNAN 693 (1140)
T ss_pred CHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh------------------cCCCCCeEEEEcCCch
Confidence 35667777777775 6678776 46899999999999999999975 8999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHH--HHHhhhcC--CceeccCCCCC-CCCccc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL--QNVASKSG--AKFSLIPPVPN-VSSETT 154 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~-~~~~~~ 154 (359)
+++++++||+++|++++|++++.+.+++.++++++++++++++++..+.. ....+..+ ...+.++.... ......
T Consensus 694 ~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 773 (1140)
T PRK06814 694 GAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADK 773 (1140)
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHH
Confidence 99999999999999999999999999999999999999999987654322 11111111 11222211110 000000
Q ss_pred ccc----cchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHH
Q 018211 155 VFD----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 155 ~~~----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 230 (359)
... ..+....+...++|+++|+|||||||.||||.++|+++..+.......++..++|++++.+|++|..++...+
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 853 (1140)
T PRK06814 774 IKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGL 853 (1140)
T ss_pred HHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHH
Confidence 000 0000011134678999999999999999999999999999888888888999999999999999999997788
Q ss_pred HHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEE
Q 018211 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (359)
Q Consensus 231 ~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~ 309 (359)
+.++..|+++++.+. ++.+.+.+. ++++++|++..+|++++.+.+.. ...+++++|.++
T Consensus 854 ~~~l~~G~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~----------~~~~~~~lr~v~ 913 (1140)
T PRK06814 854 VLPLLSGVKVFLYPSPLHYRIIPEL----------IYDTNATILFGTDTFLNGYARYA----------HPYDFRSLRYVF 913 (1140)
T ss_pred HHHHHcCCEEEEecCcccHHHHHHH----------HHhcCCEEEEecHHHHHHHHhhc----------ccccccceeEEE
Confidence 899999999998874 455666666 78899999999999999886541 224578999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 310 CGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 310 ~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+||+++++++.+.|.+.+|+++++.||+||+++.+..+
T Consensus 914 ~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~ 951 (1140)
T PRK06814 914 AGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALN 951 (1140)
T ss_pred EcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEec
Confidence 99999999999999999999999999999999866543
No 101
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.8e-37 Score=300.29 Aligned_cols=313 Identities=22% Similarity=0.303 Sum_probs=245.7
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++++.+|+++|+.++++.+||.||.++++++|..|.+. .|+++|++|+++++|++++
T Consensus 24 ~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 87 (560)
T PRK08974 24 SLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNG----------------LGLKKGDRVALMMPNLLQY 87 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 477889999999999999999999999999999999999999842 5999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCC-CCCCC---------
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPV-PNVSS--------- 151 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------- 151 (359)
++++|||+++|++++|+++..+.+++.++++.+++++++++.+..+.+..+........+..... .....
T Consensus 88 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (560)
T PRK08974 88 PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFV 167 (560)
T ss_pred HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccch
Confidence 99999999999999999999999999999999999999998776655555433222211111000 00000
Q ss_pred ------------cccccc------cchh--hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhc---c
Q 018211 152 ------------ETTVFD------QSQA--EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---Y 208 (359)
Q Consensus 152 ------------~~~~~~------~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~---~ 208 (359)
...... .... .......++++++|+|||||||.||+|.++|.++..++......+. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~ 247 (560)
T PRK08974 168 VKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLH 247 (560)
T ss_pred hhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccC
Confidence 000000 0000 0012235689999999999999999999999999887655443332 3
Q ss_pred CCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhh
Q 018211 209 TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (359)
Q Consensus 209 ~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 287 (359)
..++.++..+|++|.+++....+..+..|+++++.. ..++..+++. ++++++|.+.++|.+++.+....
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 317 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKE----------LKKYPFTAITGVNTLFNALLNNE 317 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHH----------HHhcCcceEcCcHHHHHHHHhCc
Confidence 456788899999999998766777888999877764 4677888888 88899999999999999988752
Q ss_pred hhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccccccc
Q 018211 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~~ 348 (359)
. ....+++++|.+++||+++++.+.++|++.+|+++++.||+||+|.+++.+.
T Consensus 318 ~--------~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~ 370 (560)
T PRK08974 318 E--------FQELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNP 370 (560)
T ss_pred C--------cccCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccC
Confidence 2 1223567899999999999999999999988999999999999997766543
No 102
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-36 Score=295.11 Aligned_cols=301 Identities=19% Similarity=0.220 Sum_probs=229.3
Q ss_pred HHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHH
Q 018211 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (359)
Q Consensus 8 ~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (359)
..+|+.+|+++|+.+ +++.+||+||.++++++|+.|.+ +|+++||+|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-----------------~gv~~gd~V~i~~~n~~~~~~~~ 66 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYD-----------------AGLRTGDVVALLSDNSPEALVVL 66 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHHHHHH
Confidence 456788999999986 36899999999999999999999 79999999999999999999999
Q ss_pred HHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchhhhcC
Q 018211 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (359)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
||++++|++++|+++.++.+++.+++++++++.++++................................... .....
T Consensus 67 la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 143 (501)
T PRK13390 67 WAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALA---GAGPR 143 (501)
T ss_pred HHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhc---ccCCC
Confidence 999999999999999999999999999999999999875443333222111110100000000000000000 00011
Q ss_pred CCCCCCcEEEEecCCCCCCcchhhh--hhhHHHHHH----HHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcE
Q 018211 166 GQRGEDPALIVYTSGTTGKPKGVVH--THKSIDAQV----QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (359)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~--s~~~l~~~~----~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~ 239 (359)
....+++++|+|||||||.||||.+ +|.++.... ......+++..+|++++.+|++|..++... ...+..|++
T Consensus 144 ~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~-~~~~~~g~~ 222 (501)
T PRK13390 144 LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWC-SMVHALGGT 222 (501)
T ss_pred CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHH-HHHHhcCce
Confidence 1122357999999999999999995 555554422 112335678889999999999999987543 345678999
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++.+.+++..+++. ++++++|++.++|+++..+.+.... .....+++++|.++.||+++++++
T Consensus 223 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~l~~v~~~g~~~~~~~ 286 (501)
T PRK13390 223 VVLAKRFDAQATLGH----------VERYRITVTQMVPTMFVRLLKLDAD------VRTRYDVSSLRAVIHAAAPCPVDV 286 (501)
T ss_pred EEEcCCcCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhccch------hcccCChhhhheEEEcCCCCCHHH
Confidence 999999999999999 8889999999999999988764211 011235678999999999999999
Q ss_pred HHHHHHHhCCcccccccCCcCccccc
Q 018211 320 MQQWETITGHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~TE~g~~~~ 345 (359)
.+.+.+.+|.++++.||+||+++++.
T Consensus 287 ~~~~~~~~~~~~~~~YG~tE~~~~~~ 312 (501)
T PRK13390 287 KHAMIDWLGPIVYEYYSSTEAHGMTF 312 (501)
T ss_pred HHHHHHhcCCceeeeecccccCceEE
Confidence 99999988999999999999987543
No 103
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.1e-37 Score=353.57 Aligned_cols=302 Identities=24% Similarity=0.305 Sum_probs=250.0
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++++.+|+++|++++++++||+||.++++++|..|.+ .|+++|++|+++++|++++
T Consensus 2189 ~l~~~~~~~a~~~p~~~Av~~~~~~lTY~eL~~~~~~lA~~L~~-----------------~Gv~~g~~V~l~~~~s~~~ 2251 (4334)
T PRK05691 2189 TLHGLFAAQAARTPQAPALTFAGQTLSYAELDARANRLARALRE-----------------RGVGPQVRVGLALERSLEM 2251 (4334)
T ss_pred chHHHHHHHHHHCCCCeEEEeCCeEEcHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 57889999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchh
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
++++||++++|++++|+++.++.+++.++++++++++++++.+..+.+...... ......... . .........
T Consensus 2252 vv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~--~---~~~~~~~~~ 2324 (4334)
T PRK05691 2252 VVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFEALGELPAG--VARWCLEDD--A---AALAAYSDA 2324 (4334)
T ss_pred HHHHHHHHHhCcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhhhhcccccc--ceeEEeccc--h---hhhhcCCCC
Confidence 999999999999999999999999999999999999999988655544322111 011111100 0 000000111
Q ss_pred hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEE
Q 018211 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~ 241 (359)
.......++++++|+|||||||.||||+++|+++.+.+......++++++|+++...|++|+.+.. .++.+|..|++++
T Consensus 2325 ~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~i~~~L~~G~~lv 2403 (4334)
T PRK05691 2325 PLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMRADDCELHFYSINFDAASE-RLLVPLLCGARVV 2403 (4334)
T ss_pred CCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHH-HHHHHHhCCCEEE
Confidence 111223568999999999999999999999999999998888899999999999999999999985 6899999999999
Q ss_pred EcC--CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 242 FMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 242 ~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+.+ .+++..+++. +.++++|++.++|+++..+..... ......++|.+++||+++++++
T Consensus 2404 l~~~~~~~~~~l~~~----------i~~~~vt~~~~tPs~~~~l~~~~~---------~~~~~~~lr~i~~gGe~l~~~~ 2464 (4334)
T PRK05691 2404 LRAQGQWGAEEICQL----------IREQQVSILGFTPSYGSQLAQWLA---------GQGEQLPVRMCITGGEALTGEH 2464 (4334)
T ss_pred ECCcccCCHHHHHHH----------HHHcCCeEEEcCHHHHHHHHHhhh---------ccccCCCceEEEEccccCCHHH
Confidence 976 3578888888 888999999999999999876521 1223567999999999999999
Q ss_pred HHHHHHHh-CCcccccccCCcCccccccc
Q 018211 320 MQQWETIT-GHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~TE~g~~~~~~ 347 (359)
.++|.+.+ +..++|.||+||+++..+.+
T Consensus 2465 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~ 2493 (4334)
T PRK05691 2465 LQRIRQAFAPQLFFNAYGPTETVVMPLAC 2493 (4334)
T ss_pred HHHHHHhCCCceEEeCcCCCcceEEEEEe
Confidence 99999988 47899999999998654433
No 104
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-37 Score=272.77 Aligned_cols=306 Identities=20% Similarity=0.242 Sum_probs=259.5
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.|.++|+++||++|++++++.+||+||.++++++|..|.+ +|+++||+|.+-.+|..+|
T Consensus 29 ~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~-----------------lGi~~Gd~vlvQLpN~~ef 91 (542)
T COG1021 29 TLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRR-----------------LGIKPGDTVLVQLPNVAEF 91 (542)
T ss_pred cHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCchHHH
Confidence 57889999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc-----ccHHHHHHHhhhcCC-ceeccCCCCCCC--Ccc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE-----DYREVLQNVASKSGA-KFSLIPPVPNVS--SET 153 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~ 153 (359)
++++||++++|+.+|.--|.....|+.+..+.+.++.+|.+. ++.+.+.+....... ...++....+.. .+.
T Consensus 92 ~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~ 171 (542)
T COG1021 92 YITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEA 171 (542)
T ss_pred HHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhh
Confidence 999999999999999999999999999999999999988765 334455545444443 233333222111 111
Q ss_pred ccccc-chhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHH-HHHH
Q 018211 154 TVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF-NALL 231 (359)
Q Consensus 154 ~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~-~~~~ 231 (359)
..... ....+.++.+++++++...+.||||.||.+..+|....-++....+..++++++++++.+|..|-+.+. -+.+
T Consensus 172 ~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~L 251 (542)
T COG1021 172 ALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGAL 251 (542)
T ss_pred hhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchh
Confidence 11111 112234556778899999999999999999999999999999999999999999999999999987763 2577
Q ss_pred HhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEec
Q 018211 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (359)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 311 (359)
+.++.|+++|+.++.+++.-+.. |++++||+..++|.....++++. +..+.+++|||.+-+|
T Consensus 252 Gv~~agG~VVla~~psp~~~F~l----------Ierh~Vt~tALVPpla~LWlqa~--------e~~~~~LsSLrllQVG 313 (542)
T COG1021 252 GVFLAGGTVVLAPDPSPELCFPL----------IERHGVTVTALVPPLASLWLQAA--------EWERADLSSLRLLQVG 313 (542)
T ss_pred heeeeccEEEECCCCCHHHHHHH----------HHHhccceEEeccHHHHHHHHhh--------hcccCCchheeEEeec
Confidence 88999999999999999999998 89999999999999999998873 3356789999999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccCCcCcc
Q 018211 312 SSALPLPVMQQWETITGHRLLERYGMTEGCT 342 (359)
Q Consensus 312 G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~ 342 (359)
|+.+++.+.+++...+|+.+.|.|||.|.-.
T Consensus 314 Garl~~~~Arrv~~~lgC~LQQVFGMAEGLv 344 (542)
T COG1021 314 GARLSATLARRVPAVLGCQLQQVFGMAEGLV 344 (542)
T ss_pred CcccCHHHHhhchhhhCchHHHHhhhhhhhh
Confidence 9999999999999999999999999999754
No 105
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-36 Score=312.61 Aligned_cols=300 Identities=13% Similarity=0.151 Sum_probs=233.9
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
+++.+.|.+.++.+|+++|++++++.+||+||.++++++|+.|.+ +|+++||+|+|+++|+++
T Consensus 447 ~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~-----------------~Gv~~Gd~VaI~~~n~~e 509 (994)
T PRK07868 447 ISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIA-----------------VGVRQGDRVGVLMETRPS 509 (994)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578899999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCC----------CCC
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP----------NVS 150 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 150 (359)
++++++||+++|++++|+++. +++.++++.++++++|++.+..+.+... ...++.+.... ...
T Consensus 510 ~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~----~~~iiv~~~~~~~~~~~~~~~~~~ 582 (994)
T PRK07868 510 ALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL----PGRVLVLGGGESRDLDLPDDADVI 582 (994)
T ss_pred HHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc----CceEEEecCCccccccCCcchhhh
Confidence 999999999999999999985 6899999999999999987665544322 12222221100 000
Q ss_pred Ccccccccchh-h---hcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHH
Q 018211 151 SETTVFDQSQA-E---KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (359)
Q Consensus 151 ~~~~~~~~~~~-~---~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 226 (359)
...+....... . ......++|+++|+|| ||||.||++.++|.+...........+++.++|++++.+|++|.+++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl 661 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGL 661 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHH
Confidence 00000000000 0 0011235899999998 57777777777877765554445556788899999999999999999
Q ss_pred HHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccce
Q 018211 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLR 306 (359)
Q Consensus 227 ~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 306 (359)
...++..+..|+++++.+.++++.+++. ++++++|++.++|++++.+++... ....++++||
T Consensus 662 ~~~l~~~l~gG~~vvl~~~~~~~~~~~~----------I~~~~vT~~~~~Ps~l~~L~~~~~--------~~~~~~~slr 723 (994)
T PRK07868 662 LVSLGGAVVGGSRIALSRGLDPDRFVQE----------VRQYGVTVVSYTWAMLREVVDDPA--------FVLHGNHPVR 723 (994)
T ss_pred HHHHHHHhccceEEEecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCcC--------CccCCCCceE
Confidence 7666677888888888888999999999 889999999999999999987521 1123567899
Q ss_pred EEEecCCCCCHHHHHHHHHHhC-CcccccccCCcCccccc
Q 018211 307 LMMCGSSALPLPVMQQWETITG-HRLLERYGMTEGCTKGR 345 (359)
Q Consensus 307 ~i~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~TE~g~~~~ 345 (359)
.++ | +.+++++.++|.+.++ +++++.||+||++.+..
T Consensus 724 ~~~-g-~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~ 761 (994)
T PRK07868 724 LFI-G-SGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLA 761 (994)
T ss_pred EEe-c-CCCCHHHHHHHHHHhCchheeeeeeccccccccc
Confidence 876 3 3499999999999995 89999999999876543
No 106
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.8e-36 Score=289.31 Aligned_cols=280 Identities=23% Similarity=0.283 Sum_probs=232.1
Q ss_pred ChHHHHHHH-cCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 1 MEVFKAAYK-KGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 1 m~i~~~l~~-~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
|++.+++.+ +++.+|+++|+.++++.+||.||.++++++|..|.+ .|+.+||+|+++++|++
T Consensus 2 ~~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~-----------------~g~~~~~~v~l~~~~~~ 64 (458)
T PRK09029 2 MIFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQ-----------------QGVVEGSGVALRGKNSP 64 (458)
T ss_pred chhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEecCCCH
Confidence 456666644 478899999999999999999999999999999999 69999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS 159 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (359)
+++++++||+++|++++|+++..+.+++..+++++++++++++.+... +..+. ..... ..
T Consensus 65 ~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~------~~~~~-------------~~ 124 (458)
T PRK09029 65 ETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSALT------SLHLQ-------------LV 124 (458)
T ss_pred HHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhcc------ccccc-------------cc
Confidence 999999999999999999999999999999999999999998875422 11100 00000 00
Q ss_pred hhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcE
Q 018211 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~ 239 (359)
.........++++++++|||||||.||||.++|++++..+......++..++|+++..+|++|.+++. .++.++..|++
T Consensus 125 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~ 203 (458)
T PRK09029 125 EGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQG-IVWRWLYAGAT 203 (458)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhH-HHHHHHhCCce
Confidence 00111234568899999999999999999999999999988888888999999999999999999985 56778999999
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++.+. ..+++. + .++|.+..+|+++..+...... ..++|.+++||+++++.+
T Consensus 204 v~~~~~---~~~~~~----------i--~~~t~~~~~P~~~~~l~~~~~~------------~~~l~~i~~gG~~~~~~~ 256 (458)
T PRK09029 204 LVVRDK---QPLEQA----------L--AGCTHASLVPTQLWRLLDNRSE------------PLSLKAVLLGGAAIPVEL 256 (458)
T ss_pred EEeCCh---HHHHHH----------H--hhceeeecChHHHHHHHhcccc------------CCcceEEEECCCCCCHHH
Confidence 998875 445555 4 3789999999999988765211 347999999999999999
Q ss_pred HHHHHHHhCCcccccccCCcCcccccc
Q 018211 320 MQQWETITGHRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~TE~g~~~~~ 346 (359)
.+++.+ +|.++++.||+||++...+.
T Consensus 257 ~~~~~~-~g~~~~~~YG~tE~~~~~~~ 282 (458)
T PRK09029 257 TEQAEQ-QGIRCWCGYGLTEMASTVCA 282 (458)
T ss_pred HHHHHH-cCCcEeccccccccCcceec
Confidence 999876 49999999999999876543
No 107
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-36 Score=297.19 Aligned_cols=308 Identities=16% Similarity=0.227 Sum_probs=238.9
Q ss_pred ChHHHHHHHcCCCCCCceEEeeCC---ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC
Q 018211 1 MEVFKAAYKKGSMARDSVAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (359)
Q Consensus 1 m~i~~~l~~~a~~~p~~~ai~~~~---~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n 77 (359)
+++.+.|...++.+|+..++..++ +.+||.||.+++.++|..|.+ +|+++||+|+++++|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~gi~~gd~V~l~~~n 83 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLA-----------------LGLKPGDRVALIAET 83 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCC
Confidence 468899999999988777664332 679999999999999999998 699999999999999
Q ss_pred CHHHHHHHHHHHHhCCeeeecCCCCC-------HHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCC
Q 018211 78 SFEFVAGVLGTWFSGCIAVPLALSYP-------ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS 150 (359)
Q Consensus 78 ~~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (359)
+++++++++||+++|++++|+++..+ .+++.++++.+++++++++....+.+......... ..+.......
T Consensus 84 ~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 161 (579)
T PRK09192 84 DGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPL--LHVLSHAWFK 161 (579)
T ss_pred chhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccc--cceeehhhhc
Confidence 99999999999999999999976543 68899999999999999998766655543221111 1111000000
Q ss_pred CcccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH-hhccCCCceEEEecCchhhHHHHHH
Q 018211 151 SETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFLHCLPLHHVHGLFNA 229 (359)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~d~~l~~~pl~h~~~~~~~ 229 (359)
... ..........++++++|+|||||||.||||.++|+++..+...... .+++.++|+++.++|++|.+++...
T Consensus 162 ---~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~ 236 (579)
T PRK09192 162 ---ALP--EADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGF 236 (579)
T ss_pred ---ccC--CCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHH
Confidence 000 0001112345689999999999999999999999999998887777 7889999999999999999999877
Q ss_pred HHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccc
Q 018211 230 LLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (359)
Q Consensus 230 ~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l 305 (359)
++.++..|+++++.+. .++..+++. +.++++|.+...|.++..+...... ......+++++
T Consensus 237 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~l~~~~~~~-----~~~~~~~l~~l 301 (579)
T PRK09192 237 LLTPVATQLSVDYLPTRDFARRPLQWLDL----------ISRNRGTISYSPPFGYELCARRVNS-----KDLAELDLSCW 301 (579)
T ss_pred HHHHHHhCCeeEeeCHHHHHHCHHHHHHH----------HHhcCcEEEeCCcHHHHHHHHhhcc-----ccccccchhhh
Confidence 8888999999987763 257777777 8889999877766655554432110 11223567899
Q ss_pred eEEEecCCCCCHHHHHHHHHHhC------CcccccccCCcCccccccc
Q 018211 306 RLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 306 ~~i~~~G~~l~~~~~~~~~~~~~------~~v~~~YG~TE~g~~~~~~ 347 (359)
|.+.+||+++++.+.++|.+.++ ..+++.||+||+++.++..
T Consensus 302 r~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~ 349 (579)
T PRK09192 302 RVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFS 349 (579)
T ss_pred heeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEecc
Confidence 99999999999999999998873 3599999999998766543
No 108
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-36 Score=283.66 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=222.0
Q ss_pred EEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeec
Q 018211 19 AIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL 98 (359)
Q Consensus 19 ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 98 (359)
+++++++++||.||.++++++|..|.. |+++|++|+++++|+++++++++|++++|++++|+
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~~------------------~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l 62 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQF------------------QEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPI 62 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHHc------------------CCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEec
Confidence 467788999999999999999999854 88999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchhhhcCCCCCCCcEEEEec
Q 018211 99 ALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYT 178 (359)
Q Consensus 99 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 178 (359)
++..+.+++..+++++++++++++..... .. . .....++++++++||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~---~---------------~~~~~~~~~~~i~~T 109 (414)
T PRK08308 63 HPDTPKEAAIRMAKRAGCHGLLYGESDFT---------------KL---E---------------AVNYLAEEPSLLQYS 109 (414)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEecCcccc---------------cc---c---------------CCCCCCCCceEEEEC
Confidence 99999999999999999999998763100 00 0 012345789999999
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhh
Q 018211 179 SGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRES 258 (359)
Q Consensus 179 SGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~ 258 (359)
|||||.||+|.++|+++..++..+...++...+|+++..+|++|.+++...++.++..|+++++.+.+++..+++.
T Consensus 110 SGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~---- 185 (414)
T PRK08308 110 SGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNI---- 185 (414)
T ss_pred CCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHH----
Confidence 9999999999999999999888888888888999999999999999988889999999999999999999999988
Q ss_pred cCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCC
Q 018211 259 YPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMT 338 (359)
Q Consensus 259 ~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~T 338 (359)
++++++|.+.++|.++..+.+... ...+++.++++|+++++++.++|++. +.++++.||+|
T Consensus 186 ------l~~~~~t~~~~~P~~~~~l~~~~~------------~~~~l~~~~~~G~~l~~~~~~~~~~~-~~~~~~~YG~t 246 (414)
T PRK08308 186 ------LRNTPQHILYAVPLMLHILGRLLP------------GTFQFHAVMTSGTPLPEAWFYKLRER-TTYMMQQYGCS 246 (414)
T ss_pred ------HHHhCCeEEEcCHHHHHHHHhcCC------------ccccccEEEEccCCCCHHHHHHHHHh-CChhhhccCcc
Confidence 788999999999999999876521 01368899999999999999999886 78999999999
Q ss_pred cCcccc
Q 018211 339 EGCTKG 344 (359)
Q Consensus 339 E~g~~~ 344 (359)
|++.+.
T Consensus 247 E~~~~~ 252 (414)
T PRK08308 247 EAGCVS 252 (414)
T ss_pred ccCCee
Confidence 998644
No 109
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.9e-36 Score=291.47 Aligned_cols=304 Identities=18% Similarity=0.210 Sum_probs=237.7
Q ss_pred HHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHH
Q 018211 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (359)
Q Consensus 8 ~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (359)
..+++.+|+++|+++ .++.+||.||.++++++|+.|.+ .|+++|++|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~-----------------~g~~~~~~V~v~~~~~~~~~~~~ 66 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRS-----------------LGLKRGDHVAIFMENNLRYLEVC 66 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHHHHH
Confidence 356778999999987 56889999999999999999999 69999999999999999999999
Q ss_pred HHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCc--eeccCCCCCCCCcccccccch-hh
Q 018211 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVSSETTVFDQSQ-AE 162 (359)
Q Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~ 162 (359)
+||+++|++++++++..+.+++.++++.++++.++++......+.+........ ..................... ..
T Consensus 67 ~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 67 WAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLP 146 (511)
T ss_pred HHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCC
Confidence 999999999999999999999999999999999999987666555444332211 111111111110000000000 00
Q ss_pred hcCCCCCCCcEEEEecCCCCCCcchhhh--hhhHHHH---HHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcC
Q 018211 163 KMDGQRGEDPALIVYTSGTTGKPKGVVH--THKSIDA---QVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (359)
Q Consensus 163 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~--s~~~l~~---~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G 237 (359)
.......++.+.++|||||||.||||.+ +|.++.. ........+++.+++++++..|++|..++. ..+.++..|
T Consensus 147 ~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g 225 (511)
T PRK13391 147 ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLG 225 (511)
T ss_pred CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcC
Confidence 1111233467899999999999999995 5666543 233345566788899999999999998885 467789999
Q ss_pred cEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCH
Q 018211 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (359)
Q Consensus 238 ~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~ 317 (359)
+++++.+.+++..+++. ++++++|++.++|+++..+.+.... ...+.+++++|.+++||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~~~~gg~~~~~ 289 (511)
T PRK13391 226 GTVIVMEHFDAEQYLAL----------IEEYGVTHTQLVPTMFSRMLKLPEE------VRDKYDLSSLEVAIHAAAPCPP 289 (511)
T ss_pred ceEEECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCchh------hcccCCccceeEEEEccCCCCH
Confidence 99999999999999998 8889999999999999988764211 1123457899999999999999
Q ss_pred HHHHHHHHHhCCcccccccCCcCccccc
Q 018211 318 PVMQQWETITGHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 318 ~~~~~~~~~~~~~v~~~YG~TE~g~~~~ 345 (359)
++.+++.+.+|.++++.||+||+++++.
T Consensus 290 ~~~~~~~~~~g~~v~~~YG~tE~~~~~~ 317 (511)
T PRK13391 290 QVKEQMIDWWGPIIHEYYAATEGLGFTA 317 (511)
T ss_pred HHHHHHHHHcCCceeeeeccccccceEE
Confidence 9999999988999999999999997644
No 110
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-36 Score=274.41 Aligned_cols=326 Identities=20% Similarity=0.266 Sum_probs=246.1
Q ss_pred hHHHHHHHcCCCCCCceEEee-----------------------CCccccHHHHHHHHHHHHHHHhhCCCCCcccccccc
Q 018211 2 EVFKAAYKKGSMARDSVAIRA-----------------------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~-----------------------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~ 58 (359)
|+.+.+.+..+.+.++.++-. +..+.||.|+..++..+|++|.+
T Consensus 42 Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~------------- 108 (678)
T KOG1180|consen 42 TLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVK------------- 108 (678)
T ss_pred cHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHH-------------
Confidence 455666666667777776631 23789999999999999999999
Q ss_pred ccccccCCCCCe-EEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC
Q 018211 59 NSAVLAGGCGAR-IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG 137 (359)
Q Consensus 59 ~~~~~gv~~gd~-V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 137 (359)
.|+++++. |+|+++.+.+|+.+++||++.+.++|.++..+..+.+.+-+++++.+.+|+|....+.+........
T Consensus 109 ----lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~ 184 (678)
T KOG1180|consen 109 ----LGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK 184 (678)
T ss_pred ----hCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC
Confidence 79997776 9999999999999999999999999999999999999999999999999999988887666655444
Q ss_pred C-ce-eccCCCCCCCCcccc----------cccc------hh--hhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHH
Q 018211 138 A-KF-SLIPPVPNVSSETTV----------FDQS------QA--EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA 197 (359)
Q Consensus 138 ~-~~-~~~~~~~~~~~~~~~----------~~~~------~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~ 197 (359)
. +. +.+++.+......+. .+.. .. .++.+..++|+|+|+|||||||.||||+++|+|+++
T Consensus 185 ~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA 264 (678)
T KOG1180|consen 185 TVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVA 264 (678)
T ss_pred ceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHh
Confidence 2 22 222321111111111 1111 11 123344779999999999999999999999999999
Q ss_pred HHHHHHHhh-ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecc
Q 018211 198 QVQMLTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (359)
Q Consensus 198 ~~~~~~~~~-~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 276 (359)
.+....... .+.+.|+++.++||.|++.+.+. +.+++-|+.+-+.+..+.-+--..+ ..--.+.+...+||++.++
T Consensus 265 ~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE-~~~ft~G~~iGY~S~~TLtdts~ki--~kg~kGD~~~lkPTiM~~V 341 (678)
T KOG1180|consen 265 GVTGVGENVPELGPKDRYIAYLPLAHILELTAE-LVCFTWGGRIGYSSPLTLTDTSSKI--KKGCKGDLTELKPTIMAAV 341 (678)
T ss_pred hhhhhcccCcccCCCceEEEechHHHHHHHHHH-HHHHhhCCEeecCCcceecccchhh--ccCCcCccccccchhhhhh
Confidence 888776654 67899999999999999999875 5569999999887642211111000 0011223667899999999
Q ss_pred hHHHHHHHhhhhhhh----------------------------------HHHHHHHHhhhccceEEEecCCCCCHHHHHH
Q 018211 277 PTMYTRLIQGYEAMD----------------------------------TELQAASASAAKQLRLMMCGSSALPLPVMQQ 322 (359)
Q Consensus 277 P~~~~~l~~~~~~~~----------------------------------~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~ 322 (359)
|.++.++.+..-..- ....+.+....++||++++||+|++++..+.
T Consensus 342 pAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF 421 (678)
T KOG1180|consen 342 PAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRF 421 (678)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHH
Confidence 999999876532110 0011234446789999999999999999888
Q ss_pred HHHHhCCcccccccCCcCccccccc
Q 018211 323 WETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 323 ~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+...+.+|+.++||.||+|+..+..
T Consensus 422 ~nic~C~Pv~qGYGLTEtca~~tv~ 446 (678)
T KOG1180|consen 422 MNICFCCPVLQGYGLTETCAAATVL 446 (678)
T ss_pred HHHhccccccccccccchhcccEec
Confidence 8888899999999999999876654
No 111
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-35 Score=285.92 Aligned_cols=295 Identities=24% Similarity=0.308 Sum_probs=230.1
Q ss_pred eEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeee
Q 018211 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (359)
Q Consensus 18 ~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 97 (359)
.|++.+++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++|++++|+++++
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~-----------------~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~ 65 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAA-----------------LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVP 65 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 4677888999999999999999999999 69999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCC------C--------cccccccc-hhh
Q 018211 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS------S--------ETTVFDQS-QAE 162 (359)
Q Consensus 98 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------~~~~~~~~-~~~ 162 (359)
+++..+.+++.+++++++++.++++....+.+....... ...+......... . .....+.. ...
T Consensus 66 l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (509)
T PRK12406 66 VNWHFKPEEIAYILEDSGARVLIAHADLLHGLASALPAG-VTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE 144 (509)
T ss_pred cCcccCHHHHHHHHhccCCcEEEEccchhhhhhhhhhcc-cceeecccccccccccccccccccCCCCccCHHHHhcccC
Confidence 999999999999999999999999887665443322111 1111111000000 0 00000000 001
Q ss_pred hcCCCCCCCcEEEEecCCCCCCcchhhhhhhH---HHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcE
Q 018211 163 KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKS---IDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (359)
Q Consensus 163 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~---l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~ 239 (359)
.......+++++++|||||||.||+|.++|.. +..........+++.+++++++.+|++|..+..+. +.++..|++
T Consensus 145 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~ 223 (509)
T PRK12406 145 PYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYG-LRAGRLGGV 223 (509)
T ss_pred ccCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHH-HHHHhhheE
Confidence 11223468999999999999999999986654 34444445567788899999999999999887654 446889999
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHH
Q 018211 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (359)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~ 319 (359)
+++.+.+++..+++. ++++++|.+..+|+++..++..... .....+++++|.+++||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~~~~~~~ 287 (509)
T PRK12406 224 LVLQPRFDPEELLQL----------IERHRITHMHMVPTMFIRLLKLPEE------VRAKYDVSSLRHVIHAAAPCPADV 287 (509)
T ss_pred EEEccCCCHHHHHHH----------HHHcCCeEEEccHHHHHHHHhCchh------hcccCCCCceeEEEEcCCCCCHHH
Confidence 999988899999998 8899999999999999998764221 112346789999999999999999
Q ss_pred HHHHHHHhCCcccccccCCcCccccccc
Q 018211 320 MQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
.+++.+.++..+++.||+||+++++...
T Consensus 288 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 315 (509)
T PRK12406 288 KRAMIEWWGPVIYEYYGSTESGAVTFAT 315 (509)
T ss_pred HHHHHHHcCCcEEeeccccccCceEecC
Confidence 9999998899999999999999866543
No 112
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.1e-35 Score=282.25 Aligned_cols=253 Identities=19% Similarity=0.241 Sum_probs=206.6
Q ss_pred cccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccC-CCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCH
Q 018211 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPE 104 (359)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~ 104 (359)
-|.|+||.++++++|..|.+ .|+ .+|++|+++++|+++++++++|++++|++++|+++.++.
T Consensus 19 ~~~~~el~~~~~~~a~~L~~-----------------~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~ 81 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQ-----------------LATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQ 81 (452)
T ss_pred ecChHHHHHHHHHHHHHHHH-----------------hcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCH
Confidence 48899999999999999999 677 579999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchhhhcCCCCCCCcEEEEecCCCCCC
Q 018211 105 SELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGK 184 (359)
Q Consensus 105 ~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 184 (359)
+++.++++.+++++++++.+..... .. . . .. ......++++++++|||||||.
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~---~---~----~~----~~~~~~~~~~~~i~~TSGTTG~ 134 (452)
T PRK07445 82 QEWQQVLNLVQPDQIWGLDQLKLSH-------------PP---P---L----PS----QGILPNLETGWIMIPTGGSSGQ 134 (452)
T ss_pred HHHHHHHHhcCCCEEEecCcccccc-------------CC---C---C----Cc----cccCCCCCCcEEEEeCCCCCCC
Confidence 9999999999999999876532110 00 0 0 00 0112345899999999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCC
Q 018211 185 PKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 185 pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~ 264 (359)
||||.+||+++...+......++..+ ++.++.+|++|.+|+. .++.+++.|+++++.+..........
T Consensus 135 PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~---------- 202 (452)
T PRK07445 135 IRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQEL---------- 202 (452)
T ss_pred CcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhh----------
Confidence 99999999999988887777776654 4678899999999985 57889999999999874322222222
Q ss_pred CCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCcccc
Q 018211 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKG 344 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~ 344 (359)
..++++|++.++|.+++.+.+.. ..++++||.+++||+++++++.+++.+ +|+++++.||+||++..+
T Consensus 203 ~~~~~~t~~~~vP~~l~~l~~~~-----------~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~~ 270 (452)
T PRK07445 203 PPNPSDFFLSLVPTQLQRLLQLR-----------PQWLAQFRTILLGGAPAWPSLLEQARQ-LQLRLAPTYGMTETASQI 270 (452)
T ss_pred hhhcCceEEEehHHHHHHHHhhC-----------hhhhhcceEEEECCccCCHHHHHHHHh-cCCeEecCcchhhhcccc
Confidence 44678999999999999987521 124688999999999999999998876 599999999999998655
Q ss_pred cc
Q 018211 345 RH 346 (359)
Q Consensus 345 ~~ 346 (359)
+.
T Consensus 271 ~~ 272 (452)
T PRK07445 271 AT 272 (452)
T ss_pred cc
Confidence 44
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.5e-35 Score=285.37 Aligned_cols=303 Identities=20% Similarity=0.253 Sum_probs=236.2
Q ss_pred hHHHHHHHcCCCCCCceEEee--CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH
Q 018211 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~ 79 (359)
++.+.|..+|..+|+.+++.+ .++.+||.||+++++++|+.|.+ .|+++||+|+++++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-----------------~g~~~gd~V~l~~~~~~ 65 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-----------------AGVGPGDAVAVLAGAPV 65 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCch
Confidence 578889999999999999975 44689999999999999999999 69999999999999999
Q ss_pred HHHHHHHHHHHhCCeeeecCCCCCHHHH-------HHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCc
Q 018211 80 EFVAGVLGTWFSGCIAVPLALSYPESEL-------LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSE 152 (359)
Q Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (359)
+++++++||+++|++++++++..+.+++ .++++.++++.+++++.....+..... .......+..
T Consensus 66 ~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~------- 137 (545)
T PRK07768 66 EIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE-KGIRVLTVAD------- 137 (545)
T ss_pred HHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc-cCCceeehhh-------
Confidence 9999999999999999999988776544 556777899999998765443332211 1111111111
Q ss_pred ccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCC-ceEEEecCchhhHHHHHHHH
Q 018211 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA-DQFLHCLPLHHVHGLFNALL 231 (359)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~-d~~l~~~pl~h~~~~~~~~~ 231 (359)
+...... ......++++++|+|||||||.||+|.++|+++...+......+++..+ |++++.+|++|..+++..++
T Consensus 138 --l~~~~~~-~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 214 (545)
T PRK07768 138 --LLAADPI-DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLT 214 (545)
T ss_pred --hcccCCC-CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHH
Confidence 1000010 1223456899999999999999999999999999988887777888776 89999999999999987777
Q ss_pred HhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceE
Q 018211 232 APLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (359)
Q Consensus 232 ~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 307 (359)
.++..|+++++.+. .++..+++. ++++++|++..+|..+..+........ .....+++++|.
T Consensus 215 ~~l~~g~~~v~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~lr~ 280 (545)
T PRK07768 215 VPMYFGAELVKVTPMDFLRDPLLWAEL----------ISKYRGTMTAAPNFAYALLARRLRRQA----KPGAFDLSSLRF 280 (545)
T ss_pred HHHHCCceEEEeCHHHHHHhHHHHHHH----------HHHhCCEEEECchHHHHHHHHHHhccc----cccCCCchheee
Confidence 88999999988864 256666666 888999998888877766654321100 011246789999
Q ss_pred EEecCCCCCHHHHHHHHHH---hCC---cccccccCCcCcccccc
Q 018211 308 MMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEGCTKGRH 346 (359)
Q Consensus 308 i~~~G~~l~~~~~~~~~~~---~~~---~v~~~YG~TE~g~~~~~ 346 (359)
++++|+++++++.+++.+. +|. .+++.||+||++..++.
T Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~ 325 (545)
T PRK07768 281 ALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSF 325 (545)
T ss_pred EEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEc
Confidence 9999999999999999875 555 49999999999876543
No 114
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.2e-35 Score=281.95 Aligned_cols=294 Identities=20% Similarity=0.230 Sum_probs=228.7
Q ss_pred eEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeee
Q 018211 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (359)
Q Consensus 18 ~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 97 (359)
.++.+.++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~-----------------~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 65 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRA-----------------LGLREGDVVAILLENNPEFFEVYWAARRSGLYYTP 65 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEe
Confidence 5666788999999999999999999999 69999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC--CceeccCCCCCCCCcccccccch-hhhcCCCCCCCcEE
Q 018211 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPNVSSETTVFDQSQ-AEKMDGQRGEDPAL 174 (359)
Q Consensus 98 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 174 (359)
+++..+.+++.++++++++++++++....+.+........ .....+... ............. .........++.++
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 144 (502)
T PRK08276 66 INWHLTAAEIAYIVDDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAG-PVPGFRSYEEALAAQPDTPIADETAGAD 144 (502)
T ss_pred cccccCHHHHHHHHhcCCCCEEEEccchhhHHHHHhhhccccccEEEEeCC-CCCccccHHHHHhcCCCCCCCCCCcceE
Confidence 9999999999999999999999999877665554433322 111222110 0000000000000 01112234567899
Q ss_pred EEecCCCCCCcchhhhhhhHHHHHH------HHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCCh
Q 018211 175 IVYTSGTTGKPKGVVHTHKSIDAQV------QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV 248 (359)
Q Consensus 175 i~~TSGtTG~pK~v~~s~~~l~~~~------~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~ 248 (359)
++|||||||.||+|.++|.++.... ...........++++++..|++|..++.. .+.++..|+++++.+.+++
T Consensus 145 i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 223 (502)
T PRK08276 145 MLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDA 223 (502)
T ss_pred EEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCH
Confidence 9999999999999999887765322 11122222346789999999999999865 4578999999999999999
Q ss_pred hHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC
Q 018211 249 RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG 328 (359)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~ 328 (359)
..+++. ++++++|++.++|+++..+.+..... ....+++++|.+++||++++.++.+++.+.+|
T Consensus 224 ~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~ 287 (502)
T PRK08276 224 EEALAL----------IERYRVTHSQLVPTMFVRMLKLPEEV------RARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG 287 (502)
T ss_pred HHHHHH----------HHHhCCeEEEehHHHHHHHHhCcccc------CCCCCcccceEEEecCCCCCHHHHHHHHHHhC
Confidence 999998 88899999999999999988753211 12346789999999999999999999999889
Q ss_pred CcccccccCCcCcccccc
Q 018211 329 HRLLERYGMTEGCTKGRH 346 (359)
Q Consensus 329 ~~v~~~YG~TE~g~~~~~ 346 (359)
.++++.||+||+++++..
T Consensus 288 ~~~~~~yG~tE~~~~~~~ 305 (502)
T PRK08276 288 PIIHEYYASSEGGGVTVI 305 (502)
T ss_pred cHhhhhcccccccceeEe
Confidence 999999999999985443
No 115
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=8.1e-35 Score=274.82 Aligned_cols=273 Identities=25% Similarity=0.379 Sum_probs=224.3
Q ss_pred cHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHH
Q 018211 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (359)
Q Consensus 28 Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 107 (359)
||.||.+.++++|+.|.+. .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++
T Consensus 1 t~~~l~~~~~~~a~~l~~~----------------~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~ 64 (408)
T TIGR01733 1 TYRELDERANRLARHLRAA----------------GGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERL 64 (408)
T ss_pred CHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHH
Confidence 7999999999999999973 489999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchhhhcCCCCCCCcEEEEecCCCCCCcch
Q 018211 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (359)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 187 (359)
.++++.++++.++++......+..... ....+..... ...... ............+++++++|||||||.||+
T Consensus 65 ~~~l~~~~~~~ii~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~ 137 (408)
T TIGR01733 65 AFILEDAGARLLLTDSALASRLAGLVL----PIILVDPLEL-AALDDA--PAPPPPDAPSGPDDLAYVIYTSGSTGRPKG 137 (408)
T ss_pred HHHHHhcCCCEEEEcCchhhhccccCC----ceEEechhhh-hhcccc--cccccccCCCCCCCcEEEEEcCCCCCCCCE
Confidence 999999999999999876554433211 1111110000 000000 000000111346899999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCCh---hHHHHHHHhhcCCCCC
Q 018211 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV---RGIWQRWRESYPVNGN 264 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~---~~~~~~~~~~~~~~~~ 264 (359)
|.++|.++..........++..++|++++..|++|.+++. .++.++..|+++++.+.... ..+.+.
T Consensus 138 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~---------- 206 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAAL---------- 206 (408)
T ss_pred EEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------
Confidence 9999999999999888888899999999999999999985 68999999999999886543 556555
Q ss_pred CCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhC-CcccccccCCcCccc
Q 018211 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEGCTK 343 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~TE~g~~ 343 (359)
++++++|.+.++|.+++.+.+... ..+++||.+++||+++++++.++|.+.++ +.+++.||+||+|++
T Consensus 207 ~~~~~~t~l~~~p~~~~~l~~~~~-----------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~ 275 (408)
T TIGR01733 207 IAEHPVTVLNLTPSLLALLAAALP-----------PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVW 275 (408)
T ss_pred HHHcCceEEEeCHHHHHHHHHhhh-----------hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEE
Confidence 788899999999999999987621 45789999999999999999999999996 999999999999987
Q ss_pred cc
Q 018211 344 GR 345 (359)
Q Consensus 344 ~~ 345 (359)
+.
T Consensus 276 ~~ 277 (408)
T TIGR01733 276 ST 277 (408)
T ss_pred EE
Confidence 64
No 116
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=3.4e-34 Score=297.91 Aligned_cols=301 Identities=12% Similarity=0.072 Sum_probs=227.6
Q ss_pred hHHHHHHHcCCCCCCceEEeeC---C--ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD---Q--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~---~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
|+.+.|.+.++.+|+++|+... + +++||+|+.++++++|..|.+ +|+++||+|+|+++
T Consensus 428 Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-----------------lGV~~GDrVaIls~ 490 (1452)
T PTZ00297 428 SLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-----------------LGVRPGDVIGVDCE 490 (1452)
T ss_pred CHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 6788999999999999999631 2 689999999999999999999 79999999999999
Q ss_pred CCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCC-----C--
Q 018211 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-----V-- 149 (359)
Q Consensus 77 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-- 149 (359)
|+++|+++++||+++|++.+|+++ +.+++.+++++++++++|++.+..+.+.......-..++.++.... .
T Consensus 491 N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~ 568 (1452)
T PTZ00297 491 ASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVAR 568 (1452)
T ss_pred CCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccc
Confidence 999999999999999999999975 4678999999999999999987766665543321112222221100 0
Q ss_pred ------CCcccccccc---hhhhcCCCCCCCcEEEEe---cCCCCCCcchhhhhhhHHHHHHHHHHHhh---ccCCCceE
Q 018211 150 ------SSETTVFDQS---QAEKMDGQRGEDPALIVY---TSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQF 214 (359)
Q Consensus 150 ------~~~~~~~~~~---~~~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~ 214 (359)
....++.... .........++|++.|+| ||||||.||||++||+|++.++....... ...++|++
T Consensus 569 ~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~ 648 (1452)
T PTZ00297 569 DLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLM 648 (1452)
T ss_pred cCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEE
Confidence 0011111100 011122336788999996 99999999999999999999988766532 35678999
Q ss_pred EEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhH--
Q 018211 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT-- 292 (359)
Q Consensus 215 l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~-- 292 (359)
++++|++|++++. ..+.++..|+++.. ++++.++++ +++++||++.++|++++++.........
T Consensus 649 Ls~LPLaHI~er~-~~~~~l~~G~~I~~---~d~~~lled----------L~~~rPTv~~~VPrv~ekI~~~i~~~~~~~ 714 (1452)
T PTZ00297 649 VHFTPFAMLFNRV-FVLGLFAHGSAVAT---VDAAHLQRA----------FVKFQPTILVAAPSLFSTSRLQLSRANERY 714 (1452)
T ss_pred EEechHHHHHHHH-HHHHHHHcCCEEEe---CCHHHHHHH----------HHHHCCEEEEecHHHHHHHHHHHHHHhhhh
Confidence 9999999999975 46778999999874 468888888 8889999999999999998765422110
Q ss_pred --------------------------------HHHHHHHhhhccceEEEecCC--CCCHHHHHHHHHHhCCcccccccCC
Q 018211 293 --------------------------------ELQAASASAAKQLRLMMCGSS--ALPLPVMQQWETITGHRLLERYGMT 338 (359)
Q Consensus 293 --------------------------------~~~~~~~~~~~~l~~i~~~G~--~l~~~~~~~~~~~~~~~v~~~YG~T 338 (359)
...+.+....+++|++++||+ +++..+ ..++++..+||+|
T Consensus 715 ~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l------~~~i~i~~g~glT 788 (1452)
T PTZ00297 715 SAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL------LEHISVCYVPCLR 788 (1452)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH------hCCceEEEecceE
Confidence 112233445588999999984 444222 2378899999999
Q ss_pred cCc
Q 018211 339 EGC 341 (359)
Q Consensus 339 E~g 341 (359)
|+.
T Consensus 789 E~~ 791 (1452)
T PTZ00297 789 EVF 791 (1452)
T ss_pred Eee
Confidence 953
No 117
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5.1e-34 Score=271.78 Aligned_cols=263 Identities=27% Similarity=0.379 Sum_probs=217.3
Q ss_pred cHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHH
Q 018211 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (359)
Q Consensus 28 Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 107 (359)
||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++|++++|++++|+++..+.+++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-----------------~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~ 63 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-----------------QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENER 63 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHH
Confidence 899999999999999999 699999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCcccccccchhhhcCCCCCCCcEEEEecCCCCCCcch
Q 018211 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (359)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 187 (359)
..++++++++++++++....... ....+.... .. .............+++++++|||||||.||+
T Consensus 64 ~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 64 TNQLEDLDVQLLLTDSLLEEKDF--------QADSLDRIE------AA-GRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred HHHHHhcCCCEEEEcCcccccce--------eecchHhhh------hc-ccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 99999999999999875321100 000000000 00 0000001123345789999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCC
Q 018211 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAG 267 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (359)
|.++|.++...+......++..++|++++..|++|..++. .++.++..|+++++.+.++ .+++. +++
T Consensus 129 v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~~--~~~~~----------l~~ 195 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKFN--QLLEM----------IAN 195 (436)
T ss_pred EEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHH-HHHHHHhcCceEEecchHH--HHHHH----------HHH
Confidence 9999999999988888889999999999999999999885 6889999999999997654 77777 888
Q ss_pred CcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCccccccc
Q 018211 268 EAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 268 ~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+++|++.++|+++..+.+... ..+++|.++++|+++++++.+.+.+ +|+++++.||+||+|+.++..
T Consensus 196 ~~~t~~~~~P~~l~~l~~~~~------------~~~~l~~~~~~G~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~ 262 (436)
T TIGR01923 196 ERVTHISLVPTQLNRLLDEGG------------HNENLRKILLGGSAIPAPLIEEAQQ-YGLPIYLSYGMTETCSQVTTA 262 (436)
T ss_pred hCCeEEEeHHHHHHHHHhCcC------------CCCceEEEEECCCCCCHHHHHHHHH-hCCceeeEecCCccchhccCc
Confidence 999999999999999887521 1167999999999999999998876 599999999999998865544
Q ss_pred c
Q 018211 348 W 348 (359)
Q Consensus 348 ~ 348 (359)
.
T Consensus 263 ~ 263 (436)
T TIGR01923 263 T 263 (436)
T ss_pred C
Confidence 3
No 118
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.1e-33 Score=263.96 Aligned_cols=305 Identities=22% Similarity=0.271 Sum_probs=242.3
Q ss_pred CCCceEEeeC------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHH
Q 018211 14 ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLG 87 (359)
Q Consensus 14 ~p~~~ai~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA 87 (359)
.++++|+++. ...+||.|+.+++.++|..|.. .|+++||+|++++|+.++++++++|
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-----------------~g~~kGD~V~~~mPm~~e~~ia~lA 140 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-----------------CGLKKGDTVAIYMPMIPEAVIAMLA 140 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-----------------cCCCCCcEEEEeccCChHHHHHHHH
Confidence 5888888863 2458999999999999999997 7999999999999999999999999
Q ss_pred HHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHH---------HHHHhhhcCCc------eeccCC-CCCCCC
Q 018211 88 TWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV---------LQNVASKSGAK------FSLIPP-VPNVSS 151 (359)
Q Consensus 88 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~~~~~------~~~~~~-~~~~~~ 151 (359)
|.++|++..++...++.+++...+++++++++++....... ..+........ ...+.. ......
T Consensus 141 ~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 220 (626)
T KOG1175|consen 141 CARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFW 220 (626)
T ss_pred HhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccH
Confidence 99999999999999999999999999999999987543221 11111111100 001110 011111
Q ss_pred cccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHH-HHHHHHHHHhhccCCCceEEEecCchhhHHHHHHH
Q 018211 152 ETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSI-DAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l-~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 230 (359)
........+...+...+.+|+.+|+|||||||.||++.+++... +..+......++.+++|++.+...+.++.+.++.+
T Consensus 221 ~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~ 300 (626)
T KOG1175|consen 221 SLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVL 300 (626)
T ss_pred HHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhh
Confidence 11112222223355667799999999999999999999998874 45555666678899999999999999999999888
Q ss_pred HHhhhcCcEEEEcCC--CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEE
Q 018211 231 LAPLYAGATVEFMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (359)
Q Consensus 231 ~~~l~~G~~i~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i 308 (359)
+++|+.|+++++.+. +++..+++. +.++++|+++..|+.++.+.+..... .....+++||++
T Consensus 301 ~gpl~~Ga~~vl~~g~p~~~~~~~~~----------v~k~~it~l~t~pt~~r~l~~~~~~~------~~~~~~~sLk~~ 364 (626)
T KOG1175|consen 301 YGPLLNGATVVLYEGPPFDPGRIWKI----------LDKYKVTVLYTAPTAYRLLRRLGQED------VTSYSLKSLRTC 364 (626)
T ss_pred hhhhhcCcEEEEEcCCCCChhhhhhh----------HhhcceEEEEeccHHHHHHHHhcccc------ccccccceEEEE
Confidence 899999999999974 588889998 89999999999999999887753322 222345789999
Q ss_pred EecCCCCCHHHHHHHHHHhCC-cccccccCCcCccccccccccC
Q 018211 309 MCGSSALPLPVMQQWETITGH-RLLERYGMTEGCTKGRHCWQST 351 (359)
Q Consensus 309 ~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~TE~g~~~~~~~~~~ 351 (359)
.++|+++.++..+++.+.+|. +|++.||+||+|+.+..+....
T Consensus 365 ~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~ 408 (626)
T KOG1175|consen 365 GSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGK 408 (626)
T ss_pred eecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCC
Confidence 999999999999999999987 7999999999999988877655
No 119
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.3e-32 Score=266.53 Aligned_cols=252 Identities=19% Similarity=0.155 Sum_probs=189.5
Q ss_pred cCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc------HHHHHHHhhhcCCceeccCCCC-
Q 018211 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY------REVLQNVASKSGAKFSLIPPVP- 147 (359)
Q Consensus 75 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 147 (359)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.+.........+++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 1222222211111111111000
Q ss_pred --------CCCCccccc---ccc----hhh-hcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCC
Q 018211 148 --------NVSSETTVF---DQS----QAE-KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA 211 (359)
Q Consensus 148 --------~~~~~~~~~---~~~----~~~-~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~ 211 (359)
......+.. ... ... ......++|+++|+|||||||.||||++||.+++.+.......++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 000111110 000 000 0112245899999999999999999999999988776655666788899
Q ss_pred ceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhh
Q 018211 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (359)
Q Consensus 212 d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 290 (359)
|++++..|++|..++. .++.++..|+++++.+. +++..+++. ++++++|++.++|+++..+++....
T Consensus 161 d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~----------i~~~~vt~~~~vP~~~~~l~~~~~~- 228 (499)
T PLN03051 161 DVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKF----------VQDAGVTVLGLVPSIVKAWRHTGAF- 228 (499)
T ss_pred CEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHH----------HHHhCCcEEEeCHHHHHHHHhcCcc-
Confidence 9999999999999975 68889999999999874 788889988 8899999999999999998764210
Q ss_pred hHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHh--CCcccccccCCcCccc
Q 018211 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEGCTK 343 (359)
Q Consensus 291 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v~~~YG~TE~g~~ 343 (359)
.....++++||.+++||+++++++.+++.+.+ +.++++.||+||+++.
T Consensus 229 -----~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~ 278 (499)
T PLN03051 229 -----AMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASG 278 (499)
T ss_pred -----ccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccce
Confidence 01234678999999999999999998777643 4889999999998753
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=5.3e-27 Score=234.26 Aligned_cols=296 Identities=25% Similarity=0.374 Sum_probs=237.7
Q ss_pred hHHHHHHHcCCCCCCceEEeeCCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH
Q 018211 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~ 81 (359)
++.+.+...+...|++.|+.+.+..+||.|+..+++++|..|.+ .|+.+++.|+++.++++++
T Consensus 228 ~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~-----------------~g~~~~~~V~i~~~rs~~~ 290 (642)
T COG1020 228 TIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLIS-----------------LGVGPGETVAILADRSLEL 290 (642)
T ss_pred hHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCeEEEEcCCCHHH
Confidence 47788999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCCCCCccccc-ccch
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVF-DQSQ 160 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 160 (359)
+++++|++++|+.++|+++.++.+.+.++++++++..+++........... +. ..++ .... ....
T Consensus 291 i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~----~~--~~~~--------~~~~~~~~~ 356 (642)
T COG1020 291 VVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL----PG--LALD--------DALSEIPDT 356 (642)
T ss_pred HHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccC----Cc--cccc--------cccccCCcc
Confidence 999999999999999999999999999999999999999883221110000 00 0000 0000 0000
Q ss_pred hhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEE
Q 018211 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i 240 (359)
........+++.++++|||||||.||||..+|+++.+........++.+..|+++...++++..+.+ .++.++..|+++
T Consensus 357 ~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l 435 (642)
T COG1020 357 DPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVF-EIFGALLEGARL 435 (642)
T ss_pred CcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHH-HHHHHHhCCCEE
Confidence 0002233458999999999999999999999999999777777788999999999999999988875 699999999999
Q ss_pred EEcCC---CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCH
Q 018211 241 EFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (359)
Q Consensus 241 ~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~ 317 (359)
++.+. .++..+.+. +.++++|++..+|.++..+...... .......+.+|.+.+||++++.
T Consensus 436 ~~~~~~~~~~~~~l~~~----------~~~~~vt~~~~~p~~~~~~~~~~~~------~~~~~~~~~lr~~~~gGe~l~~ 499 (642)
T COG1020 436 VLAPALLQVDPAALLEL----------LEAQGITVLLLVPLLLRLLLLAALA------PDLISPCERLRQLLSGGEALPL 499 (642)
T ss_pred EecCccccCCHHHHHHH----------HHHcCCEEEEecHHHHHHHHhchhh------ccccCCcccccEEEEcCCCCCH
Confidence 99984 467777777 7889999999999999998875110 0001112349999999999999
Q ss_pred HHHHHHHHHh--CCcccccccCCcCccccc
Q 018211 318 PVMQQWETIT--GHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 318 ~~~~~~~~~~--~~~v~~~YG~TE~g~~~~ 345 (359)
.+.+.+.... ...+.+.||.||+.....
T Consensus 500 ~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~ 529 (642)
T COG1020 500 ALVQRLLQLAALARRLLNLYGPTEATLDAP 529 (642)
T ss_pred HHHHHHHHhccccceEeeccCccHHhhhee
Confidence 9999998765 468999999999655443
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=3e-27 Score=204.34 Aligned_cols=207 Identities=17% Similarity=0.156 Sum_probs=157.0
Q ss_pred HHHcCCCCCCceEEeeC------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHH
Q 018211 7 AYKKGSMARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (359)
Q Consensus 7 l~~~a~~~p~~~ai~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~ 80 (359)
|...++.+|+++|+++. ++++||+|+.++++++|+.|.+. +|+++||+|+|+++|+++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~Gv~~GdrV~i~~~n~~~ 65 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDE----------------LDAEPGSRVALDLPAHWQ 65 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHH
Confidence 45677889999999742 23699999999999999999961 399999999999999999
Q ss_pred HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcCCceecc-----CCC---CCCCCc
Q 018211 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLI-----PPV---PNVSSE 152 (359)
Q Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~ 152 (359)
++++++|++++|++++|++ .+++++++++.+..+.+... .....+ ... ......
T Consensus 66 ~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T TIGR03089 66 TAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAAGS-----GEVVALSLDPLGRRVAGELPPGV 127 (227)
T ss_pred HHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhcccC-----CceEEEeccccccCCCCCCCCcc
Confidence 9999999999999999995 78899999988766654311 111111 000 000010
Q ss_pred ccccccch---h-hhcC-CCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHH
Q 018211 153 TTVFDQSQ---A-EKMD-GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (359)
Q Consensus 153 ~~~~~~~~---~-~~~~-~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~ 227 (359)
........ . .... ...++|++.|+||||+ +|.+++... ...+++++|+++ .+|++|..|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~ 193 (227)
T TIGR03089 128 IDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFL 193 (227)
T ss_pred cchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHH
Confidence 11111011 0 0111 3456899999999986 566655543 556788999999 99999999998
Q ss_pred HHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcce
Q 018211 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAIT 271 (359)
Q Consensus 228 ~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt 271 (359)
..++.+|..|+++++.++|++..+++. ++++|||
T Consensus 194 ~~~~~~l~~G~t~v~~~rFd~~~~l~~----------i~~~~vT 227 (227)
T TIGR03089 194 ATLLAPLAAGGSLVLVTHPDPARLDQI----------AETERVT 227 (227)
T ss_pred HHHHHHhccCceEEEecCCCHHHHHHH----------HHhhcCC
Confidence 889999999999999999999999999 8888886
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.88 E-value=5.8e-22 Score=184.59 Aligned_cols=152 Identities=22% Similarity=0.312 Sum_probs=127.8
Q ss_pred CCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCC--CceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCC
Q 018211 170 EDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS--ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS 247 (359)
Q Consensus 170 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~--~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~ 247 (359)
+..++++|||||||.||+|.++|+++...+......+++.. .|++++.+|++|..++.+.++.++..|+++++.+.++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 55789999999999999999999999998888777777653 4689999999999998777888999999999999889
Q ss_pred hhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHHHHh
Q 018211 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT 327 (359)
Q Consensus 248 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~ 327 (359)
+..+++. ++.+ |++.++|.+++.+.+.. .++++++. ++||+++++++.+.+.+.
T Consensus 175 ~~~~l~~----------i~~~--t~~~~~P~~l~~l~~~~------------~~l~slr~-i~gGa~l~~~l~~~~~~~- 228 (386)
T TIGR02372 175 ASGIMRH----------ARPG--DLIVGTPFIWEQLADLD------------YRLPGVVG-VSSGAPSTAATWRCLLAA- 228 (386)
T ss_pred hHHHHHh----------hccC--CEEEECcHHHHHHHhhC------------cCCCccee-EecCCCCCHHHHHHHHHh-
Confidence 8888887 4433 88999999999987641 24567876 678999999999999875
Q ss_pred CC-cccccccCCcCccccccc
Q 018211 328 GH-RLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 328 ~~-~v~~~YG~TE~g~~~~~~ 347 (359)
+. ++++.||+||++++.+..
T Consensus 229 g~~~v~~~YG~TEt~~i~~~~ 249 (386)
T TIGR02372 229 GLARLLEVYGATETGGIGLRE 249 (386)
T ss_pred cccchhheecccccccccccc
Confidence 64 799999999999865543
No 123
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.83 E-value=1.1e-19 Score=168.79 Aligned_cols=157 Identities=26% Similarity=0.375 Sum_probs=127.0
Q ss_pred CCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEE---
Q 018211 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF--- 242 (359)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~--- 242 (359)
...++|+++|+|||||||.||+|.++|.++..........+ ...++++..+|++|..++. .++.++..|++.++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHH-HHHHHHHcCCeEEecCc
Confidence 44568999999999999999999999999998877655543 3567899999999999985 57788999999887
Q ss_pred cCCCChhHHHHHHHhhcCCCCCCCCCc--ceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHH
Q 018211 243 MPKFSVRGIWQRWRESYPVNGNRAGEA--ITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (359)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~ 320 (359)
...+++..+++. +++++ .++...+|..+..++.... ...+++++|.+++||+++++++.
T Consensus 108 ~~~~~~~~~~~~----------i~~~~~~~~~~~~~p~~l~~~~~~~~---------~~~~~~~l~~i~~gG~~l~~~~~ 168 (358)
T PRK07824 108 SAGFDPTALPRA----------VAELGGGRRYTSLVPMQLAKALDDPA---------ATAALAELDAVLVGGGPAPAPVL 168 (358)
T ss_pred CCCcCHHHHHHH----------HHHhCCCceEEEecHHHHHHHHhCcc---------ccCCcccceEEEECCCCCCHHHH
Confidence 345788898888 56666 5566778888877665421 12357889999999999999999
Q ss_pred HHHHHHhCCcccccccCCcCccccc
Q 018211 321 QQWETITGHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 321 ~~~~~~~~~~v~~~YG~TE~g~~~~ 345 (359)
+++.+ +|+++++.||+||+++.+.
T Consensus 169 ~~~~~-~~~~v~~~YG~TE~~~~~~ 192 (358)
T PRK07824 169 DAAAA-AGINVVRTYGMSETSGGCV 192 (358)
T ss_pred HHHHh-cCCcEEecccCCccCCCcC
Confidence 98876 5999999999999987543
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.78 E-value=5.3e-17 Score=158.63 Aligned_cols=298 Identities=14% Similarity=0.220 Sum_probs=217.9
Q ss_pred hHHHHHHHcCCCCCCceEEeeC------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc
Q 018211 2 EVFKAAYKKGSMARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (359)
Q Consensus 2 ~i~~~l~~~a~~~p~~~ai~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~ 75 (359)
++.++|+.+++.+|+++|+..- ..++||.++..+|.+++..|..+ --++.||.|++++
T Consensus 771 ~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k----------------~~lk~Gd~V~Lmy 834 (1363)
T KOG3628|consen 771 TILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDK----------------GHLKAGDHVVLMY 834 (1363)
T ss_pred HHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhc----------------ccCCCCCeEEEEc
Confidence 6889999999999999999862 37999999999999999999986 5889999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeeeecCCCCC------HHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC------Cceecc
Q 018211 76 KPSFEFVAGVLGTWFSGCIAVPLALSYP------ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG------AKFSLI 143 (359)
Q Consensus 76 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~------~~~~~~ 143 (359)
+++.|++++++||+.+|++++|+.|... -..+..+++.+++..|+++......+........ ..+...
T Consensus 835 ~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~ 914 (1363)
T KOG3628|consen 835 PPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVL 914 (1363)
T ss_pred CChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcc
Confidence 9999999999999999999999988654 3357888999999999999876655543221111 111111
Q ss_pred CCCCCCCC--cccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCch
Q 018211 144 PPVPNVSS--ETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (359)
Q Consensus 144 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (359)
++.+.... .....+..-..++....++.+|++-+.--++|.--++.++|+.+++-+....+...+.+...++.+.+.+
T Consensus 915 ~~~~~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 915 PKLPETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred cccchhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 11111000 0001111111222334557889999988899999999999999999999998888888888888888888
Q ss_pred hhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHH
Q 018211 222 HVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (359)
Q Consensus 222 h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~ 297 (359)
-+.|+..+-+..++.|.+.++.+. -++.-+++. +++|++.-++.+=..++...+.......++..
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~----------i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~- 1063 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQI----------ISQYKVKDTYPTYSTLNLCQKGLETSVENLSK- 1063 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHH----------HhcccccccchhHHHHHHHHhccccccchhhh-
Confidence 888887777778999998777763 467788888 89999999988888888777654433222222
Q ss_pred HHhhhccceEEEecCCCCCHHHHHHHHHHh
Q 018211 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT 327 (359)
Q Consensus 298 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~ 327 (359)
...+.++ ..++..-+.....++..|.+.+
T Consensus 1064 ~gnn~s~-s~vv~~~~RPr~ali~sf~klf 1092 (1363)
T KOG3628|consen 1064 RGNNTSS-SIVVPAEERPRIALIASFKKLF 1092 (1363)
T ss_pred hhccccc-ceeeecCCccHHHHHHHHHHHH
Confidence 2223333 3344444444456667777665
No 125
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.77 E-value=3.1e-18 Score=162.59 Aligned_cols=159 Identities=20% Similarity=0.165 Sum_probs=125.6
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHH---HhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT---EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
..++++.+++||||||.||++.++|.++........ ..++..++|++++..+..+..+.+...+..+..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 346788899999999999999999999876544333 33578899999887665543333333556788899998888
Q ss_pred CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHH
Q 018211 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (359)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~ 324 (359)
..+++.+++. ++++++|++.++|+++..|.+....... +....++|.++++|+++++++.+.+.
T Consensus 153 ~~~~~~~~~~----------i~~~~~t~l~~~Ps~l~~L~~~~~~~~~------~~~~~~lr~i~~~ge~l~~~~~~~i~ 216 (422)
T TIGR02155 153 GGQTEKQVQL----------IQDFKPDIIMVTPSYMLNLLEELKRMGI------DPAQTSLQVGIFGAEPWTNAMRKEIE 216 (422)
T ss_pred CCCHHHHHHH----------HHHHCCCEEEEcHHHHHHHHHHHHHcCC------CcccCceEEEEEeCCcCCHHHHHHHH
Confidence 7778888888 8889999999999999998765221110 01235899999999999999999999
Q ss_pred HHhCCcccccccCCcCcc
Q 018211 325 TITGHRLLERYGMTEGCT 342 (359)
Q Consensus 325 ~~~~~~v~~~YG~TE~g~ 342 (359)
+.||+++++.||+||+++
T Consensus 217 ~~~g~~v~~~YG~tE~~~ 234 (422)
T TIGR02155 217 ARLGMKATDIYGLSEVIG 234 (422)
T ss_pred HHhCCceEecccchhhcC
Confidence 999999999999999853
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.72 E-value=7.2e-17 Score=153.86 Aligned_cols=156 Identities=21% Similarity=0.188 Sum_probs=121.4
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
..++++.+.+||||||.||++.+||.++.......... .++.++|+++...|..+..+.....+++...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 34678899999999999999999999988766555444 388899999999998877665444456678888876444
Q ss_pred CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHH
Q 018211 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (359)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~ 324 (359)
. ....++. +.++++|.+..+|+.+..+......... .....++|.+++||+++++++.+.+.
T Consensus 164 ~--~~~~~~~----------i~~~~~t~l~~~ps~ll~La~~~~~~g~------~~~~~~lr~ii~gGE~l~~~~r~~ie 225 (445)
T TIGR03335 164 K--CTFPIRI----------IESYRPTGIVASVFKLLRLARRMKAEGI------DPAESSIRRLVVGGESFADESRNYVE 225 (445)
T ss_pred c--hhHHHHH----------HHHhCCCEEEECHHHHHHHHHHHHHcCC------CcccCcceEEEEcCCCCCHHHHHHHH
Confidence 3 2344555 7789999999999988877664221110 01236899999999999999999999
Q ss_pred HHhCCcccccccCCcCc
Q 018211 325 TITGHRLLERYGMTEGC 341 (359)
Q Consensus 325 ~~~~~~v~~~YG~TE~g 341 (359)
+.||+++++.||+||++
T Consensus 226 ~~~g~~v~~~YG~TE~~ 242 (445)
T TIGR03335 226 ELWGCEVYNTYGSTEGT 242 (445)
T ss_pred HHhCCcEEecCChhhhh
Confidence 98999999999999986
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=2e-14 Score=144.29 Aligned_cols=307 Identities=19% Similarity=0.209 Sum_probs=195.1
Q ss_pred HHHHHHcCCCCCCceEEeeC--------CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc
Q 018211 4 FKAAYKKGSMARDSVAIRAD--------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (359)
Q Consensus 4 ~~~l~~~a~~~p~~~ai~~~--------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~ 75 (359)
.+.+.+.+...|.+.+..+. -..+||.+....++.++..|.+ .|...|+.|++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~-----------------~~~~~~~~v~i~~ 101 (1032)
T KOG1178|consen 39 EDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVS-----------------LGSLRGTTVAIYM 101 (1032)
T ss_pred hhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhh-----------------cccccCceEEEec
Confidence 44677778888888877641 2689999999999999999999 6999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeeeecCCCCC----HHHHHHHH---hhCCceEEEeccccHHHHHHHhhhcCCceeccCCCCC
Q 018211 76 KPSFEFVAGVLGTWFSGCIAVPLALSYP----ESELLHVM---HDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN 148 (359)
Q Consensus 76 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~l~~~l---~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (359)
..+.++++..+++++.|..+++++|.++ .+++..+. ......++ .. .............+..+ ....
T Consensus 102 ~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~--~~--l~i~~~~~~~~~~~~sv-~~~~- 175 (1032)
T KOG1178|consen 102 LPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIV--RR--LNIIDILLNSLFPKLSV-ETIA- 175 (1032)
T ss_pred cCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceeh--hh--hhhHHHHhhccccccch-hhcc-
Confidence 9999999999999999999999999999 22211111 11111111 10 11111111110010000 0000
Q ss_pred CCCcccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHH
Q 018211 149 VSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (359)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 228 (359)
+...........+......++..+.+.||||+||.||+|..+|..+..........+.++..+++-.....+..-....
T Consensus 176 -~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~ 254 (1032)
T KOG1178|consen 176 -DSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQK 254 (1032)
T ss_pred -chhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHH
Confidence 0000011111122223344567899999999999999999999999999988888888888887522222222222222
Q ss_pred HHHHhhhcCcEEEEcCCCC---hhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHH-H----Hh
Q 018211 229 ALLAPLYAGATVEFMPKFS---VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA-S----AS 300 (359)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~-~----~~ 300 (359)
.+.+.|+.|+.+..+.... +.++... +++|+++..+.+|++.+++.........++... . ..
T Consensus 255 ~~~~~L~~~~~l~~p~~~~~~~~~~l~~~----------le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~ 324 (1032)
T KOG1178|consen 255 FIGALLFNGNNLLVPTATIKDTPGQLAST----------LERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLT 324 (1032)
T ss_pred HHhhHhhcCceeecccccCccchhhHHHH----------HHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccc
Confidence 2334556666666665433 3444444 889999999999999888876543221111111 0 11
Q ss_pred hhccceEEEecCCCCCHHHHHHHHHHh--CCcccccccCCcCccccc
Q 018211 301 AAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEGCTKGR 345 (359)
Q Consensus 301 ~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v~~~YG~TE~g~~~~ 345 (359)
..++|+....+|++.+.++...+.+.+ +..... |+.+|..+-..
T Consensus 325 ~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~-y~s~~~~~~~s 370 (1032)
T KOG1178|consen 325 KRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLP-YLSTDPTGLVS 370 (1032)
T ss_pred cchhheeeeecCCccchhhhhhhhhcccceeeeec-ccCCCCcccee
Confidence 234799999999999999998777765 333333 77777766443
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.42 E-value=3.9e-12 Score=116.97 Aligned_cols=157 Identities=21% Similarity=0.194 Sum_probs=121.8
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh---ccCCCceEEEecC---chhhHHHHHHHHHhhhcCcEEE
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLP---LHHVHGLFNALLAPLYAGATVE 241 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~p---l~h~~~~~~~~~~~l~~G~~i~ 241 (359)
..+++..|-.||||||+|+.+.++...+...+..+...+ +...+|++..+.- +....++ -+++--.|++++
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~---~~ga~rig~~vi 164 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGL---HYGAERIGATVI 164 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchh---HHHHHhhCEEEE
Confidence 336667788899999999999999999888777766654 6778888765544 2222222 334445777777
Q ss_pred EcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHH
Q 018211 242 FMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQ 321 (359)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~ 321 (359)
-...-+.+.-.+. ++.+++|++.++|+.+..+.+....... ..+=.+||.+++|+|+++++..+
T Consensus 165 p~~~g~~~~~~~l----------~~df~~tvI~~tps~~l~lae~~~~~G~------~~~~~~lk~~i~gaE~~see~R~ 228 (438)
T COG1541 165 PISGGNTERQLEL----------MKDFKPTVIAATPSYLLYLAEEAEEEGI------DPDKLSLKKGIFGAEPWSEEMRK 228 (438)
T ss_pred ccCCccHHHHHHH----------HHhcCCcEEEEChHHHHHHHHHHHHcCC------ChhhcceeEEEEecccCCHHHHH
Confidence 6655466666666 8889999999999999999887543321 12346799999999999999999
Q ss_pred HHHHHhCCcccccccCCcCccc
Q 018211 322 QWETITGHRLLERYGMTEGCTK 343 (359)
Q Consensus 322 ~~~~~~~~~v~~~YG~TE~g~~ 343 (359)
.+.+.||+++++.||+||..+.
T Consensus 229 ~ie~~~g~~~~diYGltE~~g~ 250 (438)
T COG1541 229 VIENRFGCKAFDIYGLTEGFGP 250 (438)
T ss_pred HHHHHhCCceeeccccccccCC
Confidence 9999999999999999999877
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.14 E-value=2.3e-10 Score=113.02 Aligned_cols=290 Identities=19% Similarity=0.177 Sum_probs=202.6
Q ss_pred HHHHHHHcCCCCCCceEEeeCC-----ccccHHHHHHHHHHHHH-HHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 3 VFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISS-LLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 3 i~~~l~~~a~~~p~~~ai~~~~-----~~~Ty~el~~~~~~la~-~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
+...++.+..+++..+|.+.-+ ..+||..+..++.+.|. .|.+ .|+.++|+|.+++.
T Consensus 96 ~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~k-----------------sgl~~~~~vvL~Y~ 158 (1363)
T KOG3628|consen 96 IIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNK-----------------SGLKPGDRVVLYYR 158 (1363)
T ss_pred hHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhc-----------------cCCCCCcEEEEEEE
Confidence 4456666667888888887632 58999999999999999 5555 79999999999988
Q ss_pred CC--HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhhhcC--CceeccCCCCCCCCc
Q 018211 77 PS--FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPNVSSE 152 (359)
Q Consensus 77 n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 152 (359)
.+ .++++..++|...|.+.+|+++..+.+++..+++..+.+++++.......+........ ..+..+.. ..+...
T Consensus 159 ~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t-~~~k~~ 237 (1363)
T KOG3628|consen 159 KCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKT-NDFKGN 237 (1363)
T ss_pred hhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhc-ccccce
Confidence 87 89999999999999999999999999999999999999999988765555443321100 00001100 000000
Q ss_pred ccccccchhhhcCCCCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH--------------------hhccCCCc
Q 018211 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE--------------------AWEYTSAD 212 (359)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~--------------------~~~~~~~d 212 (359)
.. ...... +.-... ..+|-||.+++|.--|++.+|. ++.+.+.... .++....+
T Consensus 238 ~~---~~k~~~-P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~ 311 (1363)
T KOG3628|consen 238 YT---KDKIKK-PRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSED 311 (1363)
T ss_pred ee---hhhccC-Cceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCccc
Confidence 00 001111 111223 7899999999999999999998 6655443321 12344567
Q ss_pred eEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC---CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhh
Q 018211 213 QFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (359)
Q Consensus 213 ~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 289 (359)
.++.....+...|++++++.++.+|.+....++ +.+..+... +-++|.+++..--..+.+....++.
T Consensus 312 ~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l----------~~k~R~~~~ltd~~~Lkq~~~ny~~ 381 (1363)
T KOG3628|consen 312 VLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANL----------ITKYRATWSLTDYAGLKQPVYNYQE 381 (1363)
T ss_pred ceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhh----------hccceeEEEeecccccCcccccccC
Confidence 788888888889999999999999999998886 334433333 7788988877655555555444332
Q ss_pred hhHH---HHHHHHhhhccceEEEecCCCCCHHHHHHHHHH
Q 018211 290 MDTE---LQAASASAAKQLRLMMCGSSALPLPVMQQWETI 326 (359)
Q Consensus 290 ~~~~---~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~ 326 (359)
.+.. ..+.+..++++||.+++.-..+..+..+-...+
T Consensus 382 ~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~ 421 (1363)
T KOG3628|consen 382 DPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDR 421 (1363)
T ss_pred CcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHh
Confidence 2211 123344689999999999999998876555544
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.04 E-value=2.4e-09 Score=100.73 Aligned_cols=148 Identities=10% Similarity=0.065 Sum_probs=99.3
Q ss_pred cEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH-hh--ccCCCceEEEe--cCchhhHHHHHHHHHhhhcCcE-EEEcC-
Q 018211 172 PALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AW--EYTSADQFLHC--LPLHHVHGLFNALLAPLYAGAT-VEFMP- 244 (359)
Q Consensus 172 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~--~~~~~d~~l~~--~pl~h~~~~~~~~~~~l~~G~~-i~~~~- 244 (359)
-..+..||||||.|-.+..+............. .. +...++++... .+. + ++..+..... +...+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~-------ly~~~~~~~~~~~~~~l 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-N-------LYQSVNNRWISLDFFDL 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-h-------HHHHHHhccceeeecCC
Confidence 456778999999999999998876544333222 22 44455554443 222 1 1111111111 22222
Q ss_pred CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHHH
Q 018211 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (359)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~ 324 (359)
..+.+..++. +++++|+.+.+.|+.+..|.+..+... .. .+++.++++||.++++..+.+.
T Consensus 173 ~~~~~~~l~~----------L~~~~P~~L~g~pS~l~~LA~~~~~~~--------l~-~~~k~ii~~~E~l~~~~r~~Ie 233 (430)
T TIGR02304 173 LAPFQAHIKR----------LNQRKPSIIVAPPSVLRALALEVMEGE--------LT-IKPKKVISVAEVLEPQDRELIR 233 (430)
T ss_pred CcCHHHHHHH----------HHHhCCCEEEEcHHHHHHHHHHHHhcC--------CC-CCceEEEEccCCCCHHHHHHHH
Confidence 1345666666 889999999999999999988632111 01 3689999999999999999999
Q ss_pred HHhCCcccccccCCcCccccccc
Q 018211 325 TITGHRLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 325 ~~~~~~v~~~YG~TE~g~~~~~~ 347 (359)
+.||++|++.||+|| |.+++.|
T Consensus 234 ~~fg~~V~~~YG~tE-g~la~eC 255 (430)
T TIGR02304 234 NVFKNTVHQIYQATE-GFLASTC 255 (430)
T ss_pred HHhCCCeeEccCCch-hheEEec
Confidence 999999999999999 6665555
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=97.92 E-value=0.00017 Score=66.60 Aligned_cols=168 Identities=16% Similarity=0.256 Sum_probs=96.1
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh---c-cCCCc-eEEEecCchh----hHHHHHHHHHhhhcCc
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---E-YTSAD-QFLHCLPLHH----VHGLFNALLAPLYAGA 238 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~-~~~~d-~~l~~~pl~h----~~~~~~~~~~~l~~G~ 238 (359)
.++++..++-||||||.|--+.+.+..+..+..++...+ . ..... .++...|-.. ........+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 346678888999999998666666655555544433332 2 22222 2223233321 1111222333445555
Q ss_pred EEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhc-cceEEEecC----
Q 018211 239 TVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRLMMCGS---- 312 (359)
Q Consensus 239 ~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~-~l~~i~~~G---- 312 (359)
.-.+-. .++.+.+...+.+. ..+.++..+++.|.++..++...+.... +..++ ..+.+-.||
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~------~~~~~pv~l~Gftf~~~~~~~~l~~~~~------~~~L~~~s~vi~~GGwK~~ 234 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRA------EHSGEPVLLFGFTFFIWFLLDELEERGI------RFRLPKGSIVIHGGGWKGR 234 (365)
T ss_pred eeeecCCccCHHHHHHHHHHH------HhCCCCEEEECchHHHHHHHHHHHhcCC------cccCCCCCEEEeCCCCCcc
Confidence 534422 36777777665432 3567788999999988877765332111 12233 234444443
Q ss_pred --CCCC-HHHHHHHHHHhCC----cccccccCCcCccccccc
Q 018211 313 --SALP-LPVMQQWETITGH----RLLERYGMTEGCTKGRHC 347 (359)
Q Consensus 313 --~~l~-~~~~~~~~~~~~~----~v~~~YG~TE~g~~~~~~ 347 (359)
+.++ .++.+.+.+.||+ .+++.|||||.....+.+
T Consensus 235 ~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~ 276 (365)
T PF04443_consen 235 RKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYEC 276 (365)
T ss_pred ccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeC
Confidence 3575 4677777888887 799999999987655444
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.13 E-value=0.046 Score=51.29 Aligned_cols=94 Identities=17% Similarity=0.130 Sum_probs=76.4
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHHHHHHHHHHHhCCeeeecCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
--+|+.|+...+..+|+.|.. .|..+||+|.....-+ ..-+-..+|+.++|++++|+++..
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~-----------------~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~ 170 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYS-----------------AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN 170 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHH-----------------ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc
Confidence 479999999999999999999 6999999988876622 122678899999999999998854
Q ss_pred CHHHHHHHHhhCCceEEEeccccHHHHHHHhhhc
Q 018211 103 PESELLHVMHDSDISMVLSTEDYREVLQNVASKS 136 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 136 (359)
.. .-..++++.++.++.+...+...+.+.....
T Consensus 171 ~~-~~~~l~~df~~tvI~~tps~~l~lae~~~~~ 203 (438)
T COG1541 171 TE-RQLELMKDFKPTVIAATPSYLLYLAEEAEEE 203 (438)
T ss_pred HH-HHHHHHHhcCCcEEEEChHHHHHHHHHHHHc
Confidence 44 4466789999999999988877776665544
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=92.61 E-value=0.087 Score=51.59 Aligned_cols=32 Identities=28% Similarity=0.258 Sum_probs=25.3
Q ss_pred CCCCCCcEEEEecCCCCCC-cchhhhhhhHHHH
Q 018211 166 GQRGEDPALIVYTSGTTGK-PKGVVHTHKSIDA 197 (359)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~-pK~v~~s~~~l~~ 197 (359)
...++.+.+...||||||. ||-+.+|...+-.
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 3455778899999999999 9999999987755
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=90.27 E-value=5.3 Score=39.63 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=24.4
Q ss_pred CCCcEEEEecCCCCC-CcchhhhhhhHHHH
Q 018211 169 GEDPALIVYTSGTTG-KPKGVVHTHKSIDA 197 (359)
Q Consensus 169 ~~~~~~i~~TSGtTG-~pK~v~~s~~~l~~ 197 (359)
++.+.+...|||||| ++|-+.+|+..+-.
T Consensus 88 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 117 (606)
T PLN02247 88 AQPITELLTSSGTSGGQPKLMPSTAEELDR 117 (606)
T ss_pred CCCcceeeccCCCCCCceeEeeccHHHHHH
Confidence 567788999999995 89999999887644
No 135
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.81 E-value=5.4 Score=38.25 Aligned_cols=83 Identities=12% Similarity=0.020 Sum_probs=61.8
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH--HHHHHHHHHHHhCCeeeecCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
-.+|.+++...+...+..+.. .|+.+||++.+..+.+. ......+++..+|+..++...
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~-----------------~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~-- 164 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVS-----------------QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK-- 164 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc--
Confidence 467999999888888888877 69999999998876553 233456788899998887643
Q ss_pred CHHHHHHHHhhCCceEEEeccccHH
Q 018211 103 PESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
.+....++++.++.+++.......
T Consensus 165 -~~~~~~~i~~~~~t~l~~~ps~ll 188 (445)
T TIGR03335 165 -CTFPIRIIESYRPTGIVASVFKLL 188 (445)
T ss_pred -hhHHHHHHHHhCCCEEEECHHHHH
Confidence 234466788999998887654433
No 136
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.63 E-value=4.9 Score=38.11 Aligned_cols=89 Identities=15% Similarity=0.206 Sum_probs=65.8
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH--HHHHHHHHHHHhCCeeeecCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
-.+|..++......++..+.. .|+++||++........ ......++....|+..++++...
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~-----------------~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 155 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRA-----------------AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ 155 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHH-----------------cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC
Confidence 356888887777777777776 68999999887655432 22334677888999999887764
Q ss_pred CHHHHHHHHhhCCceEEEeccccHHHHHH
Q 018211 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (359)
.+.+...+++.++.+++........+.+
T Consensus 156 -~~~~~~~i~~~~~t~l~~~Ps~l~~L~~ 183 (422)
T TIGR02155 156 -TEKQVQLIQDFKPDIIMVTPSYMLNLLE 183 (422)
T ss_pred -HHHHHHHHHHHCCCEEEEcHHHHHHHHH
Confidence 4677788999999999988776655443
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=82.97 E-value=20 Score=35.78 Aligned_cols=30 Identities=17% Similarity=0.205 Sum_probs=25.1
Q ss_pred CCCCcEEEEecCCCCC-CcchhhhhhhHHHH
Q 018211 168 RGEDPALIVYTSGTTG-KPKGVVHTHKSIDA 197 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG-~pK~v~~s~~~l~~ 197 (359)
.++.+.+...|||||| ++|-+.+|+..+-.
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 3567778889999997 69999999997665
No 138
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=76.92 E-value=18 Score=31.07 Aligned_cols=52 Identities=17% Similarity=0.119 Sum_probs=42.2
Q ss_pred ccCCCCCeEEEEcCCCH--HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCc
Q 018211 63 LAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDI 116 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 116 (359)
.|+.++|++. ..|-.- .....+++.+..|++.+.. ++++++++-..+++.++
T Consensus 173 ~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 173 AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 5889999999 887663 3445789999999998887 68899988888887765
No 139
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=76.82 E-value=46 Score=29.97 Aligned_cols=58 Identities=12% Similarity=-0.014 Sum_probs=41.6
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
+++|++|. =.-.+---+...+.+...|.-++.+=|..-..+.+.+++..++.+++++.
T Consensus 59 l~pG~tIV-E~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIV-EATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEE-EcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 88888443 33333455555666667798777776666666778899999999999986
No 140
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=70.53 E-value=19 Score=33.63 Aligned_cols=88 Identities=23% Similarity=0.138 Sum_probs=62.7
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++++. -....+|++.+...+..+... .|+.++|++....|-+.. ++..+++++..|+..+..+
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~--~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIE--FVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHH--HHHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccce--eeeeecccccccccccccc
Confidence 456777765 133468888888776665544 477889999988888643 3456899999999999986
Q ss_pred -CCChhHHHHHHHhhcCCCCCCCCCcceeeec
Q 018211 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTG 275 (359)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~ 275 (359)
....+.+... +++.++..++.
T Consensus 78 ~~~~~~~~~~~----------l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHI----------LRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHH----------HHHHTESEEEE
T ss_pred ccccccccccc----------ccccceeEEEE
Confidence 4566666665 67788888885
No 141
>PRK09274 peptide synthase; Provisional
Probab=70.30 E-value=38 Score=33.25 Aligned_cols=98 Identities=18% Similarity=0.170 Sum_probs=63.6
Q ss_pred CCCCcEEEEecCCC-CCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 168 RGEDPALIVYTSGT-TGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 168 ~~~~~~~i~~TSGt-TG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
.++.++++....++ ....+...+|...+...+..+... .+..++|++...++-+... ...+++++..|+..+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEc
Confidence 34556655432222 122333368999998877766554 4788999999998876543 34588999999999988
Q ss_pred CC-CChhHHHHHHHhhcCCCCCCCCCcceeeecch
Q 018211 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (359)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (359)
+. ...+.+... +.+.++..+...+
T Consensus 97 ~~~~~~~~l~~~----------l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQC----------LAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHH----------HHhcCCCEEEecc
Confidence 65 445555444 5666777666543
No 142
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=68.85 E-value=42 Score=32.37 Aligned_cols=85 Identities=11% Similarity=0.018 Sum_probs=62.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH-HHHHHHHHHHHhCCeeeecCCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYP 103 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~ 103 (359)
-.+|++.+...+..... . .+++++|++....+... ..+...++.+..|++.+..+.. +
T Consensus 185 v~~t~~~l~~~~~~~~~---~-----------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~ 243 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---W-----------------LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-D 243 (521)
T ss_pred EEeehHHHHHHHHHHHH---h-----------------hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-C
Confidence 46788888876666544 2 48889999888877553 2233445578889988877664 8
Q ss_pred HHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 104 ESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
.+.+...+++.++.++++.......+.
T Consensus 244 ~~~~~~~l~~~~~t~l~~~p~~~~~l~ 270 (521)
T PRK06187 244 PENLLDLIETERVTFFFAVPTIWQMLL 270 (521)
T ss_pred HHHHHHHHHHhCCeEEEchHHHHHHHH
Confidence 888999999999999998776555444
No 143
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=68.81 E-value=34 Score=32.92 Aligned_cols=114 Identities=15% Similarity=0.105 Sum_probs=74.7
Q ss_pred hhhhhhhHHHHHHHHHHH---hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCC
Q 018211 187 GVVHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (359)
Q Consensus 187 ~v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~ 262 (359)
++..|.+.+...+.+++. .+|+.++|++..+.|-+.-. +.+.+++-.+|..++.... +-.+++.=.
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w--~l~~lA~A~AG~v~v~~NP~Yq~~elr~~-------- 144 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEW--VLCQLACARAGLVLVNLNPAYQSEELRYV-------- 144 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHH--HHHHHHHHHhceEEeccCcccccHHHHHH--------
Confidence 456888888887776654 46899999999999987543 3356788888888887753 332332222
Q ss_pred CCCCCCcceeeecchHHHHH-----HHhhh-hhhhHHHHHHHHhhhccceEEEecC
Q 018211 263 GNRAGEAITAFTGVPTMYTR-----LIQGY-EAMDTELQAASASAAKQLRLMMCGS 312 (359)
Q Consensus 263 ~~i~~~~vt~~~~~P~~~~~-----l~~~~-~~~~~~~~~~~~~~~~~l~~i~~~G 312 (359)
+++.++..++..|.+-.. +.+-. +-....-...+...++.|++++..+
T Consensus 145 --L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 145 --LKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred --HhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 788999999988876443 22211 1000111134556788899988877
No 144
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=66.94 E-value=37 Score=32.77 Aligned_cols=86 Identities=19% Similarity=0.209 Sum_probs=62.5
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH--HHHHHHHHHHHhCCeeeecCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
-.+|+..+...+..+... .+++++|++....+-.. .+...+++++..|+.+++. +..
T Consensus 184 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~ 242 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY--------------------LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVF 242 (513)
T ss_pred EEEecHHHHHHHHHHHHh--------------------hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcC
Confidence 468888887665554322 47788999888777542 3445678889999988775 567
Q ss_pred CHHHHHHHHhhCCceEEEeccccHHHHHH
Q 018211 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (359)
+.+.+...+++.++.++.........+..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 243 DPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred CHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 78888889999999999887765555443
No 145
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=66.57 E-value=71 Score=31.36 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=66.0
Q ss_pred CCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHHH
Q 018211 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (359)
Q Consensus 14 ~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~~ 82 (359)
.|+.+|++. .+-.+|++.+...+..... . .++.++|++....|-. ..+.
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~-----------------~~~~~~d~~l~~~p~~h~~g~~ 240 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---F-----------------FSPKEDDVMMSFLPPFHAYGFN 240 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-----------------cCCCCCceEEEecchHhhhhhH
Confidence 467777764 1357898888765444332 2 4677889888777643 2233
Q ss_pred HHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
...+..+..|+..+.......++.+...+++.++.++.........+.
T Consensus 241 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 288 (539)
T PRK06334 241 SCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYIL 288 (539)
T ss_pred HHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHH
Confidence 345667778988776655677888889999999999988776655443
No 146
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=66.55 E-value=64 Score=28.68 Aligned_cols=105 Identities=14% Similarity=0.198 Sum_probs=63.3
Q ss_pred eEEee-CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeee
Q 018211 18 VAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (359)
Q Consensus 18 ~ai~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 96 (359)
++|+. .+..+-.+.+. |...+|..|.++ |-.|..++.+....+.. .+...|..+.
T Consensus 2 i~ir~Da~~~iG~GHv~-Rcl~LA~~l~~~---------------------g~~v~f~~~~~~~~~~~--~i~~~g~~v~ 57 (279)
T TIGR03590 2 ILFRADASSEIGLGHVM-RCLTLARALHAQ---------------------GAEVAFACKPLPGDLID--LLLSAGFPVY 57 (279)
T ss_pred EEEEecCCccccccHHH-HHHHHHHHHHHC---------------------CCEEEEEeCCCCHHHHH--HHHHcCCeEE
Confidence 44553 34666666665 567888999763 55677776666555433 3357777776
Q ss_pred ecCCCC----CHHHHHHHHhhCCceEEEecccc-HHHHHHHhhhcCCceeccCCC
Q 018211 97 PLALSY----PESELLHVMHDSDISMVLSTEDY-REVLQNVASKSGAKFSLIPPV 146 (359)
Q Consensus 97 ~l~~~~----~~~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~ 146 (359)
.++... ..+++..++++.+++++|+|.-. .............+...+++.
T Consensus 58 ~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 58 ELPDESSRYDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred EecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecC
Confidence 664432 24468888999999999999732 222222222234455555554
No 147
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=64.22 E-value=6.2 Score=24.30 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=22.6
Q ss_pred eEEEecCCCCCHHHHHHHHHHhCCcc
Q 018211 306 RLMMCGSSALPLPVMQQWETITGHRL 331 (359)
Q Consensus 306 ~~i~~~G~~l~~~~~~~~~~~~~~~v 331 (359)
+++-++|.|++.++.+.++..||-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 57889999999999999998887654
No 148
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=61.84 E-value=33 Score=33.82 Aligned_cols=88 Identities=15% Similarity=0.086 Sum_probs=71.3
Q ss_pred hhhhhhhHHHHHHHHHHHhh---c--cCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcC
Q 018211 187 GVVHTHKSIDAQVQMLTEAW---E--YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYP 260 (359)
Q Consensus 187 ~v~~s~~~l~~~~~~~~~~~---~--~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~ 260 (359)
|..+|++.+...+..++..+ + ...+|++....|-+..+.. ..++++..|+.+.-.. .++..++...
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~------ 114 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQ------ 114 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHH------
Confidence 77899999998888777665 2 6789999999999876655 3688899999988776 4677777777
Q ss_pred CCCCCCCCcceeeecchHHHHHHHhh
Q 018211 261 VNGNRAGEAITAFTGVPTMYTRLIQG 286 (359)
Q Consensus 261 ~~~~i~~~~vt~~~~~P~~~~~l~~~ 286 (359)
++..++++++.....+..+...
T Consensus 115 ----~~~s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 115 ----LKDSKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred ----HHhcCCeEEEEcCchHHHHHHH
Confidence 7778999999999888887654
No 149
>PLN03052 acetate--CoA ligase; Provisional
Probab=61.57 E-value=67 Score=33.06 Aligned_cols=98 Identities=19% Similarity=0.180 Sum_probs=68.1
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.+|++.-..+..|.+ ...+|...|...+..+... .|..++|++...+|.+--. +..+++++..|+..+...
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeC
Confidence 457777664433321211 2357888888777665544 5789999999999986543 345889999999988775
Q ss_pred -CCChhHHHHHHHhhcCCCCCCCCCcceeeecchH
Q 018211 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (359)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (359)
.+.++.+... +...++..++....
T Consensus 265 p~~~~~~l~~r----------l~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DSFAPSEIATR----------LKISKAKAIFTQDV 289 (728)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEEcCc
Confidence 5777877777 66677777776554
No 150
>PRK08316 acyl-CoA synthetase; Validated
Probab=59.75 E-value=83 Score=30.39 Aligned_cols=85 Identities=16% Similarity=-0.012 Sum_probs=61.9
Q ss_pred hhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
..+|...+...+..+... .++.++|++....|-+... +..+++++..|+..+..+. +..+.+...
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~--~~~~~a~~~~G~~~v~l~~~~~~~~i~~~--------- 103 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAY--ALLWLACARAGAVHVPVNFMLTGEELAYI--------- 103 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHH---------
Confidence 457888887766665543 4688899999988876643 3458899999999988874 556666555
Q ss_pred CCCCCcceeeecchHHHHHHH
Q 018211 264 NRAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~~~~l~ 284 (359)
+++.++..++..+.....+.
T Consensus 104 -l~~~~~~~ii~~~~~~~~~~ 123 (523)
T PRK08316 104 -LDHSGARAFLVDPALAPTAE 123 (523)
T ss_pred -HHhCCCCEEEEccchHHHHH
Confidence 77788888888777666554
No 151
>PRK08315 AMP-binding domain protein; Validated
Probab=59.30 E-value=70 Score=31.34 Aligned_cols=82 Identities=12% Similarity=0.101 Sum_probs=58.9
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC--CHHHHHHHHHHHHhCCeeeecCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP--SFEFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
-.+|+..+...+..+... .+++++|++....+- ...++..+++.+..|+..+......
T Consensus 217 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 276 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA--------------------MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGF 276 (559)
T ss_pred EEeeHHHHHHHHHHHHHh--------------------cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCC
Confidence 467787776555543322 477889998877765 2445556788888898887566667
Q ss_pred CHHHHHHHHhhCCceEEEeccccH
Q 018211 103 PESELLHVMHDSDISMVLSTEDYR 126 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~ 126 (359)
.+..+...+++.++.+++......
T Consensus 277 ~~~~~~~~l~~~~~t~~~~~P~~~ 300 (559)
T PRK08315 277 DPLATLAAVEEERCTALYGVPTMF 300 (559)
T ss_pred CHHHHHHHHHHcCCeEEecchHHH
Confidence 788888899999999988765433
No 152
>PRK07529 AMP-binding domain protein; Validated
Probab=58.68 E-value=67 Score=32.30 Aligned_cols=96 Identities=16% Similarity=0.071 Sum_probs=63.3
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++++....+.. ..+...+|.+.+...+..+... .|..++|++...+|-+.-. +..+++++..|..+-+-+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCCC
Confidence 456667665533211 1234578999988766665544 4788999999999976543 345788888885433334
Q ss_pred CCChhHHHHHHHhhcCCCCCCCCCcceeeecc
Q 018211 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (359)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 276 (359)
...++.+... +++.++..++..
T Consensus 115 ~~~~~~i~~~----------l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAEL----------LRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHH----------HHhcCCcEEEEe
Confidence 5667777666 666777777664
No 153
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=58.43 E-value=62 Score=32.42 Aligned_cols=97 Identities=16% Similarity=0.126 Sum_probs=67.6
Q ss_pred CCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
..++.++++.... .+|. ...+|.+.+...+..+... .|..++|++...+|.+--. +..+++++..|+..+..
T Consensus 69 ~~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 69 ARPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVV 143 (625)
T ss_pred cCCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEecc
Confidence 3556777664322 1222 3458899888776666554 4788999999999876543 34588999999998877
Q ss_pred C-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchH
Q 018211 244 P-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (359)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (359)
. .+.++.+... ++..++..++..+.
T Consensus 144 ~~~~~~~~l~~~----------l~~~~~~~li~~~~ 169 (625)
T TIGR02188 144 FGGFSAEALADR----------INDAGAKLVITADE 169 (625)
T ss_pred CCCCCHHHHHHH----------HHhcCCCEEEEcCc
Confidence 5 5677777776 66778887776554
No 154
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=58.07 E-value=92 Score=24.59 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=51.1
Q ss_pred cCCCCCeEEEE-cCCC-HHHHHHHHHHHHhCCeeeecCCCC-------CHHHHHHHHhhCCceEEEeccccHHHHHHHhh
Q 018211 64 AGGCGARIGIV-AKPS-FEFVAGVLGTWFSGCIAVPLALSY-------PESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (359)
Q Consensus 64 gv~~gd~V~i~-~~n~-~~~~~~~lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (359)
..-+|..|+++ ..+| .--+-...|+.++|+.++.+++.. +.++...++... +++++.-......+.++.+
T Consensus 35 ~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~D~iv~R~~~~~~~~~~a~ 113 (142)
T PF02729_consen 35 QLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-VDAIVIRHPSHGALEELAE 113 (142)
T ss_dssp TTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-CSEEEEEESSHHHHHHHHH
T ss_pred ccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-hheEEEEeccchHHHHHHH
Confidence 35567766655 5555 455566788999999999988543 355667778888 7777776666666666666
Q ss_pred hcCCcee
Q 018211 135 KSGAKFS 141 (359)
Q Consensus 135 ~~~~~~~ 141 (359)
....+++
T Consensus 114 ~~~vPVI 120 (142)
T PF02729_consen 114 HSSVPVI 120 (142)
T ss_dssp HCSSEEE
T ss_pred hccCCeE
Confidence 5554443
No 155
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=57.59 E-value=1.1e+02 Score=28.53 Aligned_cols=59 Identities=15% Similarity=0.003 Sum_probs=45.8
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
+++|....+....+-.-+...+++...|..+..+-|.....+....++..++++++++.
T Consensus 107 i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 107 ITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 56775545556667788888888899998777776666666778889999999999874
No 156
>PLN03102 acyl-activating enzyme; Provisional
Probab=57.50 E-value=67 Score=31.85 Aligned_cols=82 Identities=12% Similarity=0.011 Sum_probs=61.2
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|.+.+...+..+... .|+.++|++...+|-+-. ++..+++++..|++++..+. ...+.+...
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e--~~~~~la~~~~G~~~vpl~~~~~~~~l~~~---------- 106 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA--MYEMHFAVPMAGAVLNPINTRLDATSIAAI---------- 106 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeeccccCCHHHHHHH----------
Confidence 58888888877776654 478899999999997543 34458899999999988864 456666555
Q ss_pred CCCCcceeeecchHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~ 282 (359)
+++.+++.++..+.....
T Consensus 107 l~~~~~~~ii~~~~~~~~ 124 (579)
T PLN03102 107 LRHAKPKILFVDRSFEPL 124 (579)
T ss_pred HhccCCeEEEEChhhHHH
Confidence 778889888876655443
No 157
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=57.48 E-value=63 Score=31.17 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=60.2
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|++.+...+..+... .+..++|++...++-+...- ..+++++..|+..+..+. ...+.+...
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~~~~~---------- 92 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETV--TAMFGAALAGGVFVPINPLLKAEQVAHI---------- 92 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHhcCEEEEeCCCCCCHHHHHHH----------
Confidence 57888887766555443 46778999999888866543 358899999999988774 566666666
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+++.+++.++..+..+..+
T Consensus 93 l~~~~~~~~i~~~~~~~~~ 111 (515)
T TIGR03098 93 LADCNVRLLVTSSERLDLL 111 (515)
T ss_pred HHcCCCeEEEEccchhhhh
Confidence 7778888887776655443
No 158
>PRK07788 acyl-CoA synthetase; Validated
Probab=57.04 E-value=60 Score=31.79 Aligned_cols=83 Identities=22% Similarity=0.175 Sum_probs=61.3
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|.+.+...+..+... .++.++|++...++-+- ..+..+++++..|+..+..+. ...+.+...
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 141 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEV---------- 141 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHH----------
Confidence 58888888777666554 47888999998887654 334468899999999998875 455555555
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+++.++..++..+.+...+
T Consensus 142 l~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 142 AAREGVKALVYDDEFTDLL 160 (549)
T ss_pred HHhcCCcEEEECchhHHHH
Confidence 7778888888877665554
No 159
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=56.12 E-value=82 Score=31.82 Aligned_cols=78 Identities=15% Similarity=0.067 Sum_probs=60.0
Q ss_pred hhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCC
Q 018211 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~ 263 (359)
..+|.+.+...+..+... .|..++|++...+|.+--.- ..+++++..|+..+... .+.++.+...
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~~--------- 159 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL--IAMLSCARIGATHCVLFDGYSVKSLIDR--------- 159 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEeeCCCCCHHHHHHH---------
Confidence 468999998877766654 48999999999999875433 45889999999987775 5778888777
Q ss_pred CCCCCcceeeecch
Q 018211 264 NRAGEAITAFTGVP 277 (359)
Q Consensus 264 ~i~~~~vt~~~~~P 277 (359)
++..+++.++...
T Consensus 160 -l~~~~~~~li~~~ 172 (647)
T PTZ00237 160 -IETITPKLIITTN 172 (647)
T ss_pred -HHhcCCCEEEEcc
Confidence 6677788777654
No 160
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=55.66 E-value=1.2e+02 Score=29.30 Aligned_cols=82 Identities=6% Similarity=-0.056 Sum_probs=60.3
Q ss_pred hhhhhHHHHHHHHHHH---hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+.. ..+..++|++....+-+...- ..+++++..|+..+..+. +..+.+...
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 104 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPINARLLREESAWI---------- 104 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcCcccCHHHHHHH----------
Confidence 4788888776666554 347889999999988876544 357899999999987764 566666555
Q ss_pred CCCCcceeeecchHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~ 282 (359)
+++.+++.++..+.....
T Consensus 105 l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 105 LQNSQASLLVTSAQFYPM 122 (517)
T ss_pred HHhcCceEEEEecchhHH
Confidence 777888888877765443
No 161
>PLN02736 long-chain acyl-CoA synthetase
Probab=54.83 E-value=82 Score=31.81 Aligned_cols=84 Identities=7% Similarity=-0.157 Sum_probs=62.8
Q ss_pred hhhhhHHHHHHHHHHH---hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|.+.+...+..+.. ..|+.++|++...++-+--.- ..+++++..|+..+... .+.++.+...
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~i---------- 145 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFI---------- 145 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHH----------
Confidence 4788888877666554 458899999998888765433 35788999999998775 4566666666
Q ss_pred CCCCcceeeecchHHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l~ 284 (359)
++..+++.++..+..+..+.
T Consensus 146 l~~~~~~~l~~~~~~~~~~~ 165 (651)
T PLN02736 146 VNHAEVAAIFCVPQTLNTLL 165 (651)
T ss_pred HhccCCCEEEECHHHHHHHH
Confidence 78889999998877665543
No 162
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=54.73 E-value=88 Score=31.42 Aligned_cols=97 Identities=18% Similarity=0.142 Sum_probs=67.1
Q ss_pred CCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
..++.+|++..... + .....+|++.+...+..+... .|..++|++...+|-+-.. +..+++++..|+..+..
T Consensus 79 ~~p~~~Al~~~~~~--~-~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 79 TRGDKVAIIWEGDD--P-GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVV 153 (637)
T ss_pred cCCCCeEEEEECCC--C-CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEec
Confidence 34677777643211 0 123468999998877766654 4788999999998886543 34588999999999888
Q ss_pred C-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchH
Q 018211 244 P-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (359)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (359)
. .+..+.+... ++..++..++....
T Consensus 154 ~~~~~~~~l~~~----------l~~~~~~~li~~~~ 179 (637)
T PRK00174 154 FGGFSAEALADR----------IIDAGAKLVITADE 179 (637)
T ss_pred CCCCCHHHHHHH----------HHhcCCcEEEEcCc
Confidence 6 4566666666 66677777776543
No 163
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.70 E-value=93 Score=29.97 Aligned_cols=83 Identities=11% Similarity=-0.018 Sum_probs=59.5
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..++|++....+-+...- ..+++++..|+..+..+. +....+...
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~~~l~~~~~~~~~~~~---------- 78 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFF--EVYWAARRSGLYYTPINWHLTAAEIAYI---------- 78 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHH----------
Confidence 47778887766655543 47889999999988875543 348899999999998875 445555554
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+++.+++.++..+.....+
T Consensus 79 ~~~~~~~~ii~~~~~~~~~ 97 (502)
T PRK08276 79 VDDSGAKVLIVSAALADTA 97 (502)
T ss_pred HhcCCCCEEEEccchhhHH
Confidence 6777888887777665544
No 164
>PLN02654 acetate-CoA ligase
Probab=54.49 E-value=44 Score=33.92 Aligned_cols=97 Identities=20% Similarity=0.119 Sum_probs=67.4
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.+|++..... .| ....+|...|...+..+... .|..++|++...+|..-- .+..+++++..|+..+...
T Consensus 102 ~~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e--~v~a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 102 NGDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME--LPIAMLACARIGAVHSVVF 176 (666)
T ss_pred CCCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecC
Confidence 4566666532221 11 12358999998877766654 578899999999988653 3446899999999988775
Q ss_pred -CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHH
Q 018211 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (359)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~ 279 (359)
.+.++.+... ++..++..++.....
T Consensus 177 ~~~~~~~l~~~----------l~~~~~~~li~~~~~ 202 (666)
T PLN02654 177 AGFSAESLAQR----------IVDCKPKVVITCNAV 202 (666)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEEcCcc
Confidence 5777777777 667778877765543
No 165
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=54.20 E-value=92 Score=30.49 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=64.6
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++.+-... | ..+|+..+...+..+... .+..++|++...+|-+...- ..+++++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG--IVALGIMAAGGVFSGAN 111 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEeccCC
Confidence 456666653221 2 368999998877776654 47788999999887765443 45789999999988776
Q ss_pred C-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHH
Q 018211 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 282 (359)
. ...+++... +++.++..+...+..+..
T Consensus 112 ~~~~~~~l~~~----------l~~~~~~~~i~~~~~~~~ 140 (546)
T PLN02330 112 PTALESEIKKQ----------AEAAGAKLIVTNDTNYGK 140 (546)
T ss_pred ccCCHHHHHHH----------HHhcCCeEEEEccchhhh
Confidence 4 344555555 666777777666555443
No 166
>PRK06839 acyl-CoA synthetase; Validated
Probab=54.20 E-value=1.4e+02 Score=28.68 Aligned_cols=84 Identities=8% Similarity=-0.077 Sum_probs=62.5
Q ss_pred hhhhhhHHHHHHHHHHHh----hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCC
Q 018211 188 VVHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~ 262 (359)
..+|+..+...+..+... .+..+++++....+-+... ...+++++..|+..+..+. .+..++...
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~~~~~~~~~~~~~~-------- 95 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY--IVLLFAIAKVECIAVPLNIRLTENELIFQ-------- 95 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecCcccCHHHHHHH--------
Confidence 468899988877766554 4678899999988887543 3458899999999998874 556665555
Q ss_pred CCCCCCcceeeecchHHHHHH
Q 018211 263 GNRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 263 ~~i~~~~vt~~~~~P~~~~~l 283 (359)
+++.+++.++..+.....+
T Consensus 96 --l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 96 --LKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred --HHhcCceEEEEcHHHHHHH
Confidence 6677888888877766544
No 167
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=53.86 E-value=92 Score=31.43 Aligned_cols=94 Identities=23% Similarity=0.252 Sum_probs=64.1
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++++.... .|. ...+|...|...+..+... .|..++|++...+|.+--. +..+++++..|+..+...
T Consensus 97 ~~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l~ 170 (655)
T PRK03584 97 RDDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSCS 170 (655)
T ss_pred CCCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEeeC
Confidence 456677664332 121 2358888888877665544 4788999999999876443 346889999999988775
Q ss_pred -CCChhHHHHHHHhhcCCCCCCCCCcceeeecch
Q 018211 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (359)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (359)
.+..+.+... ++..++..++..+
T Consensus 171 ~~~~~~~l~~~----------l~~~~~~~li~~~ 194 (655)
T PRK03584 171 PDFGVQGVLDR----------FGQIEPKVLIAVD 194 (655)
T ss_pred CCCCHHHHHHH----------HHHcCCcEEEEcc
Confidence 5666776666 5556667666544
No 168
>PRK05857 acyl-CoA synthetase; Validated
Probab=53.83 E-value=90 Score=30.58 Aligned_cols=93 Identities=17% Similarity=0.013 Sum_probs=62.5
Q ss_pred CCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
..|+.++++.. .| ...+|...+...+..+... .+..++|++...++-+...- ..+++++..|+..+..
T Consensus 26 ~~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~--~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 26 QQPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETY--LSVLACAKLGAIAVMA 96 (540)
T ss_pred hCCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEec
Confidence 34566666532 22 1358999988877766654 47788999999888765543 4588999999999988
Q ss_pred CC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchH
Q 018211 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (359)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (359)
+. +..+.+... ++..++..++..+.
T Consensus 97 ~~~~~~~~l~~~----------~~~~~~~~ii~~~~ 122 (540)
T PRK05857 97 DGNLPIAAIERF----------CQITDPAAALVAPG 122 (540)
T ss_pred CccCCHHHHHHH----------HHhcCCceEEEecc
Confidence 74 455555555 45556665555543
No 169
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=53.63 E-value=41 Score=26.34 Aligned_cols=43 Identities=9% Similarity=0.039 Sum_probs=34.1
Q ss_pred HHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC---CHHHHHHHHHHHHhCCeee
Q 018211 37 LRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP---SFEFVAGVLGTWFSGCIAV 96 (359)
Q Consensus 37 ~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~~v 96 (359)
..+++.|.+ .|+.+++.|.+++.. +.....+++++..+|..-|
T Consensus 81 ~~~~~~~~~-----------------~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEA-----------------KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHH-----------------cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 367777777 799999999999975 6777788888899996533
No 170
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=53.27 E-value=76 Score=29.78 Aligned_cols=83 Identities=8% Similarity=-0.024 Sum_probs=58.9
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC-HHHHHHHHHHHHhCCeeeecCCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVAGVLGTWFSGCIAVPLALSYP 103 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~ 103 (359)
-.+|++.+...+..+... .+++++|++....+-. ...+..+++.+..|+..+..+..
T Consensus 129 v~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-- 186 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKEN--------------------LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-- 186 (436)
T ss_pred EEEehHHHHHHHHHHHhh--------------------cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--
Confidence 478898888766665443 4778899988777654 22334567888899988877543
Q ss_pred HHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 104 ESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
+.+...+++.++.++.........+.
T Consensus 187 -~~~~~~l~~~~~t~~~~~P~~l~~l~ 212 (436)
T TIGR01923 187 -NQLLEMIANERVTHISLVPTQLNRLL 212 (436)
T ss_pred -HHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 37788899999999988766554443
No 171
>PRK12583 acyl-CoA synthetase; Provisional
Probab=52.94 E-value=1.1e+02 Score=29.86 Aligned_cols=81 Identities=12% Similarity=0.126 Sum_probs=57.6
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCC--CHHHHHHHHHHHHhCCeeeecCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP--SFEFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
-.+|+..+...+..+... .+++++|++....+- ....+...++.+..|+.++......
T Consensus 219 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~ 278 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES--------------------LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAF 278 (558)
T ss_pred EEeeHHHHHHHHHHHHHH--------------------hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCC
Confidence 467888886555444332 477889988776653 2455667788888898887555566
Q ss_pred CHHHHHHHHhhCCceEEEecccc
Q 018211 103 PESELLHVMHDSDISMVLSTEDY 125 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~ 125 (359)
....+...+++.++.+++.....
T Consensus 279 ~~~~~~~~i~~~~~t~l~~~P~~ 301 (558)
T PRK12583 279 DPLATLQAVEEERCTALYGVPTM 301 (558)
T ss_pred CHHHHHHHHHHcCCeEEeccHHH
Confidence 77888888999999998876644
No 172
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=52.89 E-value=1.4e+02 Score=29.42 Aligned_cols=96 Identities=14% Similarity=0.112 Sum_probs=64.6
Q ss_pred CCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC-HHHHH
Q 018211 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVA 83 (359)
Q Consensus 14 ~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~-~~~~~ 83 (359)
.++.+|++. .+-.+|...+...+..... . .++.++|++....|-. ...+.
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~l~~~pl~h~~g~~ 229 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---I-----------------VGYGEDDVYLHTAPLCHIGGLS 229 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---h-----------------cCCCCCCEEEEecCchhhccHH
Confidence 456666653 1247788877654444322 2 4778899887777643 22334
Q ss_pred HHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 84 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
..++.+..|+..+.. +......+...+++.++.++.........+.
T Consensus 230 ~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 230 SALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred HHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 567778889887765 5678888899999999999988776655443
No 173
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.79 E-value=91 Score=30.73 Aligned_cols=83 Identities=16% Similarity=0.086 Sum_probs=61.9
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|+..+...+..+... .++..+|++....|-+... +..+++++..|+..+..+ .+..+.+...
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~---------- 124 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHNPLYTAHELEHP---------- 124 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCcCCCHHHHHHH----------
Confidence 47888888877766654 4688899999998886553 345889999999999776 4566666666
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+.+.++..++..+.....+
T Consensus 125 l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 125 FEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred HhccCCcEEEechhhHHHH
Confidence 7778888888766655443
No 174
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=52.79 E-value=1.5e+02 Score=30.32 Aligned_cols=86 Identities=12% Similarity=0.014 Sum_probs=63.6
Q ss_pred hhhhhhHHHHHHHHHHH---hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCC
Q 018211 188 VVHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~ 263 (359)
..+|.+.+...+..+.. ..|..++|++...++-+.- ++...++++..|+..+... .+.++++...
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 173 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHS--------- 173 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHH---------
Confidence 35788888887766655 4588899999988887643 3345788999999999765 5566666665
Q ss_pred CCCCCcceeeecchHHHHHHHh
Q 018211 264 NRAGEAITAFTGVPTMYTRLIQ 285 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~~~~l~~ 285 (359)
+...++..++..+..+..+..
T Consensus 174 -l~~s~~~~li~~~~~~~~l~~ 194 (696)
T PLN02387 174 -LNETEVTTVICDSKQLKKLID 194 (696)
T ss_pred -HHccCCCEEEECHHHHHHHHH
Confidence 777889998888777666544
No 175
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=52.31 E-value=1e+02 Score=30.12 Aligned_cols=95 Identities=15% Similarity=0.014 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++++....+ .++...+|...+...+..+... .++.++|++...+|-+... ...+++++..|+..+..+
T Consensus 37 ~p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 37 CPDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPLM 111 (547)
T ss_pred CCCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEeccc
Confidence 3466666543222 2333468889888776665554 4788999999998876554 345889999999998776
Q ss_pred C-CChhHHHHHHHhhcCCCCCCCCCcceeeecch
Q 018211 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (359)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (359)
. ...+.+... ++..++..+...+
T Consensus 112 ~~~~~~~l~~~----------l~~~~~~~li~~~ 135 (547)
T PRK13295 112 PIFRERELSFM----------LKHAESKVLVVPK 135 (547)
T ss_pred cccCHHHHHHH----------HHhcCceEEEEec
Confidence 4 445555554 5666777766544
No 176
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=51.80 E-value=1.8e+02 Score=26.06 Aligned_cols=60 Identities=12% Similarity=-0.028 Sum_probs=43.0
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (359)
+.+|++| +....+-.-....+++.+.|..+..+-|...++.....++..++.+++++...
T Consensus 54 ~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 54 LKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred CCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 3667766 45555566666777888899876666565554556778899999999998753
No 177
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=51.75 E-value=1.4e+02 Score=29.39 Aligned_cols=93 Identities=15% Similarity=0.107 Sum_probs=65.2
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh----ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
.++.++++. . +..+|+..+...+..+...+ ++.++|++...+|-+... ...+++++..|+..+..
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNT 105 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeec
Confidence 456666653 1 13579999888777766543 678999999998886543 34588999999999987
Q ss_pred CC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHH
Q 018211 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281 (359)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~ 281 (359)
+. +..+.+... +.+.++..++.......
T Consensus 106 ~~~~~~~~l~~~----------l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 106 NPLYTAREMEHQ----------FNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCCHHHHHHH----------HhccCceEEEEecchhh
Confidence 64 556666666 67777777776554433
No 178
>PLN03051 acyl-activating enzyme; Provisional
Probab=51.44 E-value=1.1e+02 Score=29.74 Aligned_cols=68 Identities=4% Similarity=-0.036 Sum_probs=48.3
Q ss_pred ccCCCCCeEEEEcCCCH-HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 63 LAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
.++.++|++....|-.. ..+..+++.+..|++.+........+.+...+++.++.++..-......+.
T Consensus 155 ~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~ 223 (499)
T PLN03051 155 MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWR 223 (499)
T ss_pred cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHH
Confidence 47778898766655432 123456778889999887765556678888999999999988776555443
No 179
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=51.01 E-value=52 Score=29.49 Aligned_cols=64 Identities=14% Similarity=-0.076 Sum_probs=50.9
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCe-eeecCCCCCHHHHHHHHhhCCceEEEeccccH
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI-AVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (359)
-.+++||.|.=...||.---...--|...|.- .-.+..+-..+++...|+..++..||++++..
T Consensus 156 v~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~ 220 (354)
T KOG0025|consen 156 VQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR 220 (354)
T ss_pred HhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence 57899999999999996665556666666864 44456777889999999999999999998654
No 180
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=51.01 E-value=6.3 Score=39.24 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=25.0
Q ss_pred CCCCCcEEEEecCCCC-CCcchhhhhhhHHH
Q 018211 167 QRGEDPALIVYTSGTT-GKPKGVVHTHKSID 196 (359)
Q Consensus 167 ~~~~~~~~i~~TSGtT-G~pK~v~~s~~~l~ 196 (359)
..++.+.+...||||| |.+|-+.+|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 3456778899999999 89999999996664
No 181
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=50.87 E-value=1.1e+02 Score=30.84 Aligned_cols=93 Identities=25% Similarity=0.240 Sum_probs=64.2
Q ss_pred CCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-
Q 018211 169 GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP- 244 (359)
Q Consensus 169 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~- 244 (359)
+++++++.... +|. ...+|.+.+...+..+... .|..++|++...+|.+--. +..+++++..|+..+...
T Consensus 98 ~~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 98 GTEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCC
Confidence 35566555422 222 2358888888877666554 4888999999999987543 345889999999988776
Q ss_pred CCChhHHHHHHHhhcCCCCCCCCCcceeeecch
Q 018211 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (359)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (359)
.+.++.+... +++.++..++...
T Consensus 172 ~~~~~~l~~~----------l~~~~~k~li~~~ 194 (652)
T TIGR01217 172 DFGARGVLDR----------FQQIEPKLLFTVD 194 (652)
T ss_pred CCCHHHHHHH----------HHhcCCcEEEEcc
Confidence 5677777766 6666777776544
No 182
>PRK11761 cysM cysteine synthase B; Provisional
Probab=50.86 E-value=1.8e+02 Score=26.15 Aligned_cols=58 Identities=12% Similarity=-0.043 Sum_probs=43.7
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
+.+|+.|.. ...+-.-....+++...|..+..+-|...+.+....++..++++++++.
T Consensus 60 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 60 IKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 466776544 4556677777888888998766666665556778889999999999986
No 183
>PRK07798 acyl-CoA synthetase; Validated
Probab=50.49 E-value=1.7e+02 Score=28.23 Aligned_cols=83 Identities=11% Similarity=-0.010 Sum_probs=58.3
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..++|++....+-+-. .+..+++++..|+..+..+. ...+.+...
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~---------- 95 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIE--YVEAMLGAFKARAVPVNVNYRYVEDELRYL---------- 95 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCeEEEecCcCCCHHHHHHH----------
Confidence 57888887766665544 467889999888766543 34457899999999998875 455555554
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+++.++..++..+.....+
T Consensus 96 l~~~~~~~~~~~~~~~~~~ 114 (533)
T PRK07798 96 LDDSDAVALVYEREFAPRV 114 (533)
T ss_pred HhhcCCCEEEEchhhHHHH
Confidence 6777888887766554443
No 184
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=50.19 E-value=1.1e+02 Score=30.09 Aligned_cols=84 Identities=8% Similarity=-0.039 Sum_probs=63.4
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..+++++....|-.... +..+++++..|+..+..+ .+..+.+...
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~---------- 113 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHI---------- 113 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHH----------
Confidence 58888888877776654 4788899999988887654 345899999999999886 4566666666
Q ss_pred CCCCcceeeecchHHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l~ 284 (359)
+++.+++.++..+.....+.
T Consensus 114 l~~~~~~~l~~~~~~~~~~~ 133 (542)
T PRK06155 114 LRNSGARLLVVEAALLAALE 133 (542)
T ss_pred HHhcCceEEEEChhhHHHHH
Confidence 77788888888776665543
No 185
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=49.98 E-value=1.7e+02 Score=29.10 Aligned_cols=96 Identities=10% Similarity=0.005 Sum_probs=66.1
Q ss_pred CCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
..++.++.+.- .-.+|+..+...+..+... .+..++|++...++-+... +..+++++..|+..+..
T Consensus 49 ~~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~--v~~~lA~~~~G~~~v~l 117 (600)
T PRK08279 49 RHPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY--LAAWLGLAKLGAVVALL 117 (600)
T ss_pred hCCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeec
Confidence 34566666641 1357888888776665543 4788899999988776543 34688999999999888
Q ss_pred CC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHH
Q 018211 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 283 (359)
+. ...+.+... +++.++..++........+
T Consensus 118 ~~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 118 NTQQRGAVLAHS----------LNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCCCHHHHHHH----------HHhcCCCEEEEChHHHHHH
Confidence 64 444555555 6777888887776655544
No 186
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=49.86 E-value=1.3e+02 Score=24.02 Aligned_cols=79 Identities=11% Similarity=0.098 Sum_probs=51.9
Q ss_pred hhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCC
Q 018211 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (359)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~ 313 (359)
...|+.+.+..+||++.+.-+-+- ..+|+-+.+...+.-|........ .....++ .-.. .
T Consensus 63 ~~~g~~l~y~GDfDp~Gl~IA~~l-------~~r~~~~~Wrm~~~dY~~~~~~~~-----------~~~~~l~-l~~v-~ 122 (152)
T PF09664_consen 63 AAAGARLYYSGDFDPEGLRIANRL-------IQRYGARPWRMDAEDYLAALSAEP-----------LSGRRLK-LPNV-A 122 (152)
T ss_pred HhCCCEEEEecCCCHHHHHHHHHH-------HHHhCCccccCCHHHHHHhccccC-----------CCCCcCC-cccC-C
Confidence 356889999999999987444221 667787778888888866554311 1112344 3333 6
Q ss_pred CCCHHHHHHHHHHhCCcccc
Q 018211 314 ALPLPVMQQWETITGHRLLE 333 (359)
Q Consensus 314 ~l~~~~~~~~~~~~~~~v~~ 333 (359)
+..+++.+.+++. |..++|
T Consensus 123 p~~~~L~~~m~~~-~~a~~Q 141 (152)
T PF09664_consen 123 PWLPELAEAMRER-GRAVYQ 141 (152)
T ss_pred hhcHHHHHHHHHh-CceeeH
Confidence 7788888888875 776654
No 187
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=49.13 E-value=1.4e+02 Score=27.54 Aligned_cols=88 Identities=15% Similarity=0.115 Sum_probs=64.8
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH-HHHHHHHHHHHhCCeeeecCCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYP 103 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~ 103 (359)
..+|+..+...+..+... .+++++|++....+... -.+..+++.+..|+..+..+....
T Consensus 138 v~~s~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 197 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARR--------------------YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEE 197 (408)
T ss_pred EEeccHHHHHHHHHHHHh--------------------cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhc
Confidence 567888888777766552 36678898888776553 345567778888888777766554
Q ss_pred --HHHHHHHHhhCCceEEEeccccHHHHHHH
Q 018211 104 --ESELLHVMHDSDISMVLSTEDYREVLQNV 132 (359)
Q Consensus 104 --~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (359)
.+.+..++++.++..++........+.+.
T Consensus 198 ~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 198 RDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred cCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 67889999999999999988776665543
No 188
>PLN02246 4-coumarate--CoA ligase
Probab=49.09 E-value=86 Score=30.60 Aligned_cols=82 Identities=12% Similarity=0.105 Sum_probs=57.9
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|+..+...+..+... .+..++|++....+-+- .....+++++..|++.+..+. +..+.+...
T Consensus 50 ~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 117 (537)
T PLN02246 50 VYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTANPFYTPAEIAKQ---------- 117 (537)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCCCCCCHHHHHHH----------
Confidence 58899888776665554 47889999999887764 334468899999999998875 445555554
Q ss_pred CCCCcceeeecchHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~ 282 (359)
++..++..+.........
T Consensus 118 l~~~~~~~li~~~~~~~~ 135 (537)
T PLN02246 118 AKASGAKLIITQSCYVDK 135 (537)
T ss_pred HHhcCCcEEEEccchHHH
Confidence 666777777665544443
No 189
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=49.07 E-value=1.7e+02 Score=25.12 Aligned_cols=59 Identities=14% Similarity=-0.045 Sum_probs=43.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH
Q 018211 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (359)
Q Consensus 67 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (359)
+++.|.. ...+-......+++...|..++.+-|...+......++..+++++.++..+.
T Consensus 49 ~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~ 107 (244)
T cd00640 49 PKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFD 107 (244)
T ss_pred CCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 4555444 4446667777778888998777776666677778889999999999987643
No 190
>PRK07638 acyl-CoA synthetase; Validated
Probab=49.03 E-value=1.4e+02 Score=28.53 Aligned_cols=86 Identities=13% Similarity=0.090 Sum_probs=60.5
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH-HHHHHHHHHHHhCCeeeecCCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYP 103 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~ 103 (359)
-.+|...+...+...+. . .+++++|++....+-.. .++...+..+..|++.+.. +..+
T Consensus 161 v~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~ 219 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---D-----------------FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFI 219 (487)
T ss_pred EEEecHHHHHHHHHHHH---h-----------------cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCC
Confidence 46777777655543332 2 46788998887665443 3355667778889888765 5677
Q ss_pred HHHHHHHHhhCCceEEEeccccHHHHHH
Q 018211 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (359)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (359)
++++...+++.++.++.........+..
T Consensus 220 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 247 (487)
T PRK07638 220 PNQVLDKLETENISVMYTVPTMLESLYK 247 (487)
T ss_pred HHHHHHHHHHcCCeEEEeCcHHHHHHHh
Confidence 8889999999999999988766655543
No 191
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=48.55 E-value=8.8 Score=17.77 Aligned_cols=10 Identities=30% Similarity=0.524 Sum_probs=8.1
Q ss_pred cccCCcCccc
Q 018211 334 RYGMTEGCTK 343 (359)
Q Consensus 334 ~YG~TE~g~~ 343 (359)
+||+|++.+.
T Consensus 1 GYGSTqTA~~ 10 (16)
T PF00818_consen 1 GYGSTQTAGE 10 (16)
T ss_pred CCCcccccCC
Confidence 5999998764
No 192
>PRK07476 eutB threonine dehydratase; Provisional
Probab=48.43 E-value=1.8e+02 Score=26.48 Aligned_cols=53 Identities=8% Similarity=-0.098 Sum_probs=39.7
Q ss_pred EcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH
Q 018211 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (359)
Q Consensus 74 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (359)
....+-.-....+++.+.|..++.+-|...+......++..++++++++..+.
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 72 TASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred EECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 33556677777888889998766666666656677788999999999986543
No 193
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=48.29 E-value=1.2e+02 Score=28.88 Aligned_cols=67 Identities=6% Similarity=0.010 Sum_probs=49.7
Q ss_pred ccCCCCCeEEEEcCCCH-HHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 63 LAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
.++.++|++....|-.. ..+..+++.+..|+..+..+ ..+.+++...+++.++.++.........+.
T Consensus 177 ~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 177 LGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred cCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 47788999988877432 22334567777898877665 567889999999999999998876665544
No 194
>PRK13388 acyl-CoA synthetase; Provisional
Probab=48.27 E-value=1.5e+02 Score=28.99 Aligned_cols=82 Identities=9% Similarity=-0.130 Sum_probs=58.2
Q ss_pred hhhhhHHHHHHHHHHHhh---cc-CCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAW---EY-TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~-~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
.+|+..+...+..+...+ +. .++|++...++-+... +..+++++..|+..+..+. +..+.+...
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~--v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~--------- 94 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM--LFWLAAAALGGYVLVGLNTTRRGAALAAD--------- 94 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH--HHHHHHHHhCCCEEEEecccCChHHHHHH---------
Confidence 678998888777666543 67 6889999888876543 3458899999999998764 455555555
Q ss_pred CCCCCcceeeecchHHHHH
Q 018211 264 NRAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~~~~ 282 (359)
+.+.++..++........
T Consensus 95 -l~~~~~~~~i~~~~~~~~ 112 (540)
T PRK13388 95 -IRRADCQLLVTDAEHRPL 112 (540)
T ss_pred -HHhcCCCEEEEChhhhHH
Confidence 667778777776555443
No 195
>PRK05850 acyl-CoA synthetase; Validated
Probab=47.49 E-value=1.7e+02 Score=28.78 Aligned_cols=84 Identities=11% Similarity=0.031 Sum_probs=59.4
Q ss_pred hhhhhhHHHHHHHHHHHhh---ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC----CChhHHHHHHHhhcC
Q 018211 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYP 260 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~ 260 (359)
..+|+..+...+..+...+ + .++|++...++-+.. ++..+++++..|+..+..+. ...+.+...
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~------ 104 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLE--YIVAFLGALQAGLIAVPLSVPQGGAHDERVSAV------ 104 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCccc--HHHHHHHHHHcCceEEecCCCCccchHHHHHHH------
Confidence 4688888887666655443 4 468999988887643 34468999999999998864 234445444
Q ss_pred CCCCCCCCcceeeecchHHHHHHH
Q 018211 261 VNGNRAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 261 ~~~~i~~~~vt~~~~~P~~~~~l~ 284 (359)
++..++..++..+.....+.
T Consensus 105 ----l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 105 ----LRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred ----HHhcCCCEEEEcHHHHHHHH
Confidence 67788888888777666553
No 196
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=47.31 E-value=1.3e+02 Score=29.75 Aligned_cols=68 Identities=13% Similarity=0.213 Sum_probs=50.3
Q ss_pred ccCCCCCeEEEEcCCCHH--HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
.++.++|++....+.... +....++.+..|++.+......+++.+...+++.++.++.........+.
T Consensus 241 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 241 LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 477788887655554422 24457788889998887777788899999999999999888776555543
No 197
>PRK13391 acyl-CoA synthetase; Provisional
Probab=47.22 E-value=1.7e+02 Score=28.18 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=66.5
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++.+...+| -.+|...+...+..+... .+..+++++....+-+...- ..+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~--~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYL--EVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhccEEeccc
Confidence 4466666654433 248888887776666554 47888999998888865543 35789999999999886
Q ss_pred C-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHH
Q 018211 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 282 (359)
. .....+... +++.++..+...+.....
T Consensus 81 ~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 81 SHLTPAEAAYI----------VDDSGARALITSAAKLDV 109 (511)
T ss_pred cccCHHHHHHH----------HhccCCcEEEEchhhHHH
Confidence 4 455555555 777788888777665543
No 198
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=46.90 E-value=1.1e+02 Score=34.07 Aligned_cols=98 Identities=14% Similarity=0.016 Sum_probs=62.9
Q ss_pred CCCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh---ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
..|+.++++...+...+......+|++.+...+..+...+ |..++|++...++-+... +..+++++..|+..+..
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVI 325 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEecc
Confidence 4567777764322111111234689999988777766544 788999999998887544 34689999999999988
Q ss_pred CCCChhHHHHHHHhhcCCCCCCCCCcceeeec
Q 018211 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTG 275 (359)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~ 275 (359)
+...+..-...+ ++..++..+..
T Consensus 326 dp~~p~~~~~~~---------l~~~~~~~li~ 348 (1389)
T TIGR03443 326 DPAYPPARQTIY---------LSVAKPRALIV 348 (1389)
T ss_pred CCCCcHHHHHHH---------HHhcCCCEEEE
Confidence 754443333332 45555555543
No 199
>PRK06188 acyl-CoA synthetase; Validated
Probab=46.51 E-value=1.5e+02 Score=28.64 Aligned_cols=84 Identities=17% Similarity=0.086 Sum_probs=60.3
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCH
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPE 104 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~ 104 (359)
-.+|+..+...+.... .. .++..+|++....+-+..+...+++.+..|+..+..+ ...+
T Consensus 186 v~~s~~~l~~~~~~~~---~~-----------------~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~ 244 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AE-----------------WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDP 244 (524)
T ss_pred eeeehHHHHHHHHHHH---hh-----------------cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCH
Confidence 4677777776555433 22 4778899998888877555556677788898887765 4567
Q ss_pred HHHHHHHhhCCceEEEeccccHHHH
Q 018211 105 SELLHVMHDSDISMVLSTEDYREVL 129 (359)
Q Consensus 105 ~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (359)
+.+...+++.++.+++........+
T Consensus 245 ~~~~~~i~~~~~t~~~~~P~~l~~l 269 (524)
T PRK06188 245 AEVLRAIEEQRITATFLVPTMIYAL 269 (524)
T ss_pred HHHHHHHHHhCCEEEEehHHHHHHH
Confidence 8888899999999998876554443
No 200
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=46.48 E-value=2e+02 Score=25.15 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=38.7
Q ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHh------C--CeeeecCCCCC---HHHHHHHHhhCCceEEEec
Q 018211 64 AGGCGARIGIVAKPSFEFVAGVLGTWFS------G--CIAVPLALSYP---ESELLHVMHDSDISMVLST 122 (359)
Q Consensus 64 gv~~gd~V~i~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~~~---~~~l~~~l~~~~~~~vi~~ 122 (359)
-+.+|++|+|-..-+.++++.+..+... + ..++.++.+.+ .+.+..+.+..++.+.+.+
T Consensus 25 li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~~ 94 (258)
T PRK10696 25 MIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIEE 94 (258)
T ss_pred CCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEEE
Confidence 5678999999999999999887766443 2 35555555432 3334555566666655544
No 201
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=46.40 E-value=1.8e+02 Score=26.33 Aligned_cols=59 Identities=5% Similarity=-0.095 Sum_probs=39.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH
Q 018211 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 68 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
++.|... ..+-.-....+++...|..+..+-|...+......++..++++++++..+.+
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~~~ 128 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNFDD 128 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcHHH
Confidence 4444443 3445555566788888976666555444556677789999999999875443
No 202
>PRK07514 malonyl-CoA synthase; Validated
Probab=46.07 E-value=1.3e+02 Score=28.97 Aligned_cols=84 Identities=15% Similarity=0.091 Sum_probs=60.3
Q ss_pred hhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
..+|...+...+..+... .+..++|++....+-+.. ....+++++..|+..+..+. .....+...
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e--~~v~~la~~~~G~~~v~l~~~~~~~~~~~~--------- 95 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPE--ALALYLATLRAGAVFLPLNTAYTLAELDYF--------- 95 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEEECCCCCCHHHHHHH---------
Confidence 468888887766665544 478899999998887643 34468899999999988764 455555555
Q ss_pred CCCCCcceeeecchHHHHHH
Q 018211 264 NRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~~~~l 283 (359)
++..+++.+...+.....+
T Consensus 96 -l~~~~~~~ii~~~~~~~~~ 114 (504)
T PRK07514 96 -IGDAEPALVVCDPANFAWL 114 (504)
T ss_pred -HHhCCCcEEEEccchhHHH
Confidence 6777888887776665543
No 203
>PRK08162 acyl-CoA synthetase; Validated
Probab=45.91 E-value=1.1e+02 Score=29.96 Aligned_cols=83 Identities=14% Similarity=0.029 Sum_probs=62.9
Q ss_pred hhhhhHHHHHHHHHHHhh---ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+...+ +..++|++...+|-+... +..+++++..|+..+..+. +..+.+...
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~---------- 110 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM--VEAHFGVPMAGAVLNTLNTRLDAASIAFM---------- 110 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEEeccccccChHHHHHH----------
Confidence 488998888777666544 788999999998887643 3458899999999887764 566666666
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+++.+++.++..+.....+
T Consensus 111 l~~~~~~~i~~~~~~~~~~ 129 (545)
T PRK08162 111 LRHGEAKVLIVDTEFAEVA 129 (545)
T ss_pred HHhCCCeEEEEccchhhHH
Confidence 7778889888877766554
No 204
>PRK06164 acyl-CoA synthetase; Validated
Probab=45.76 E-value=2.3e+02 Score=27.55 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=67.1
Q ss_pred CCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC-HHHHHH
Q 018211 15 RDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVAG 84 (359)
Q Consensus 15 p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~-~~~~~~ 84 (359)
++.++++. .+-.+|...+...+..++..+ ++.+++++...+|-+ ...+..
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~l~~~p~~~~~g~~~ 239 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY--------------------GYDPGAVLLAALPFCGVFGFST 239 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc--------------------CCCCCCEEEEcCCchhHHHHHH
Confidence 46666664 124778888876665554443 667899988887764 333456
Q ss_pred HHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHH
Q 018211 85 VLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (359)
Q Consensus 85 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (359)
+++.+..|+..+.. +......+...+++.++.+++........+..
T Consensus 240 ~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 240 LLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred HHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 77888888887765 45677888889999999999887766554443
No 205
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=45.72 E-value=2e+02 Score=27.74 Aligned_cols=48 Identities=17% Similarity=0.174 Sum_probs=32.0
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHH-HHHhCCeee--------------ecCCCCCHHHHHHHHhhCC
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLG-TWFSGCIAV--------------PLALSYPESELLHVMHDSD 115 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v--------------~l~~~~~~~~l~~~l~~~~ 115 (359)
.++++||.| .+..++.+.-| +...|++++ |.....+.+.++..++..+
T Consensus 112 l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 112 IAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred hCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 689999965 33444444444 788888776 3344568888888887543
No 206
>PLN02565 cysteine synthase
Probab=45.70 E-value=2.4e+02 Score=25.74 Aligned_cols=61 Identities=10% Similarity=-0.070 Sum_probs=46.7
Q ss_pred cC-CCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc
Q 018211 64 AG-GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (359)
Q Consensus 64 gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (359)
|. .+|....+....+-.-+...+++..+|..++.+-|...+......++..++++++++..
T Consensus 61 g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 61 GLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred CCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 53 67866555556666777777888889987777767677777788899999999998853
No 207
>PRK13383 acyl-CoA synthetase; Provisional
Probab=45.46 E-value=1.4e+02 Score=28.93 Aligned_cols=83 Identities=11% Similarity=0.043 Sum_probs=60.5
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..++|++...++-+-. .+..+++++..|+..+..+. +..+.+...
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~v~vpl~~~~~~~~l~~~---------- 127 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG--FVTAVFAVGLLGADVVPISTEFRSDALAAA---------- 127 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEEEcCccCCHHHHHHH----------
Confidence 47888887776666554 478889999988876543 33458889999999998875 455555555
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+++.++..+...+.....+
T Consensus 128 l~~~~~~~ii~~~~~~~~~ 146 (516)
T PRK13383 128 LRAHHISTVVADNEFAERI 146 (516)
T ss_pred HhcCCCCEEEEchhHHHHH
Confidence 7778888888877665544
No 208
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=45.28 E-value=1.8e+02 Score=27.43 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=43.9
Q ss_pred EcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH
Q 018211 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 74 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
.+.-+-....+.+++.++|..+..+=|...+......++..++.+++..++..+
T Consensus 119 asSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 119 ASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred EecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 344445677789999999998888888888888888899999999998876543
No 209
>PLN02574 4-coumarate--CoA ligase-like
Probab=44.92 E-value=2.4e+02 Score=27.71 Aligned_cols=97 Identities=23% Similarity=0.186 Sum_probs=65.1
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHH---h-hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE---A-WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
.++.++++. +.+| ..+|...+...+..+.. . .|+.++|++....+-+... ...+++++..|+..+..
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF--PVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH--HHHHHHHHHhCeEEeCc
Confidence 456666663 2222 24688888776665554 3 5788999999998876433 34578999999999887
Q ss_pred CC-CChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHH
Q 018211 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 283 (359)
+. ...+++... +.+.++..++..+.....+
T Consensus 123 ~p~~~~~~l~~~----------l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKR----------VVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHH----------HHhcCCEEEEECHHHHHHH
Confidence 64 455666665 5667777777766655544
No 210
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=44.85 E-value=1.2e+02 Score=29.81 Aligned_cols=96 Identities=17% Similarity=0.093 Sum_probs=69.3
Q ss_pred cEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHhh----ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CC
Q 018211 172 PALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KF 246 (359)
Q Consensus 172 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~ 246 (359)
-..|+|-+-.++. -.+|.+.|...+..+.+.+ +. ++|++..++|..--.- ..+++++..|+...... .|
T Consensus 26 ~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~--~a~LA~~riGAI~~~vf~~f 99 (528)
T COG0365 26 DTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAV--IALLATARIGAIPAVVSPGL 99 (528)
T ss_pred ceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHH--HHHHHHHHcCCEEeecccCC
Confidence 3445555444333 5788888888776665544 45 8999999999976543 46899999998777664 68
Q ss_pred ChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHH
Q 018211 247 SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 283 (359)
.++.+... +...++.++......++..
T Consensus 100 ~~~al~~R----------i~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 100 SAEAVADR----------IADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CHHHHHHH----------HHccCCCEEEEeccccccc
Confidence 88888888 6777888888777666643
No 211
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=44.73 E-value=95 Score=31.17 Aligned_cols=95 Identities=21% Similarity=0.247 Sum_probs=64.4
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++++... ..+|. .-.+|.+.|...+..+... .|..++|++...+|.+-- .+..+++++..|+..+...
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecC
Confidence 44666665432 22222 1257888888776665544 488999999999998643 3346889999999988775
Q ss_pred -CCChhHHHHHHHhhcCCCCCCCCCcceeeecch
Q 018211 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (359)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (359)
.+..+.+... +...++..++...
T Consensus 140 ~~~~~~~l~~~----------l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALR----------IDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEECC
Confidence 5667777666 5666777766543
No 212
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=44.71 E-value=1.4e+02 Score=27.28 Aligned_cols=69 Identities=12% Similarity=0.166 Sum_probs=52.6
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHHHHhh
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (359)
.|+++|++|+|..--..-++...+|-+. |.-+..++..... -+..++..++...+...+..+...++..
T Consensus 177 ~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~~k--keea~~~LGAd~fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 177 SGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSSKK--KEEAIKSLGADVFVDSTEDPDIMKAIMK 245 (360)
T ss_pred cCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCchh--HHHHHHhcCcceeEEecCCHHHHHHHHH
Confidence 6999999999999999999988888765 8877777766533 3456788999988876655555555543
No 213
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=44.61 E-value=1.5e+02 Score=30.08 Aligned_cols=83 Identities=10% Similarity=-0.114 Sum_probs=60.5
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|.+.+...+..+... .|..++|++...++-+.-. +..+++++..|+..+.... +..+++...
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i---------- 144 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDTLGANAVEFI---------- 144 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHH----------
Confidence 57888888877766554 4788999999988876443 3457899999999887764 455555554
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
++..+++.++........+
T Consensus 145 l~~s~~~~v~~~~~~~~~~ 163 (660)
T PLN02861 145 INHAEVSIAFVQESKISSI 163 (660)
T ss_pred HHcCCCCEEEECHHHHHHH
Confidence 7778888888766554444
No 214
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.57 E-value=1.4e+02 Score=29.13 Aligned_cols=84 Identities=11% Similarity=-0.003 Sum_probs=60.6
Q ss_pred hhhhhHHHHHHHHHHHhh----ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
.+|+..+...+..+...+ +..++|++....+-+- ..+..+++++..|+..+..+. .....+...
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~--------- 103 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHY--------- 103 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHH---------
Confidence 478888877666655433 7889999999888654 344568999999999998864 455555555
Q ss_pred CCCCCcceeeecchHHHHHHH
Q 018211 264 NRAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~~~~l~ 284 (359)
+++.+++.+...+.....+.
T Consensus 104 -l~~~~~~~ii~~~~~~~~~~ 123 (546)
T PRK08314 104 -VTDSGARVAIVGSELAPKVA 123 (546)
T ss_pred -HHhCCCeEEEEccchhhhHH
Confidence 77788888887776655443
No 215
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=44.55 E-value=2.3e+02 Score=25.33 Aligned_cols=58 Identities=14% Similarity=0.049 Sum_probs=42.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc
Q 018211 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (359)
Q Consensus 66 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (359)
.+|+.| +....+-.-....+++.+.|..+..+-|...+......++..++++++++..
T Consensus 56 ~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 56 KPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred CCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 667765 4555566777777788889987666666555556677899999999998764
No 216
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=44.46 E-value=1.2e+02 Score=29.83 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=64.9
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh----hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
.++.++++.. | -.+|+..+...+..+... .+..++|++...+|-... +...+++++..|++.+..
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEecc
Confidence 4566776532 2 247888888777666653 478899999998887644 334588999999999977
Q ss_pred C-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHH
Q 018211 244 P-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281 (359)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~ 281 (359)
+ .+..+.+... +.+.+++.+........
T Consensus 107 ~p~~~~~~~~~~----------l~~~~~~~vi~~~~~~~ 135 (560)
T PRK08751 107 NPLYTPRELKHQ----------LIDSGASVLVVIDNFGT 135 (560)
T ss_pred CccCCHHHHHHH----------HHhcCCeEEEEcchhHH
Confidence 5 4566666666 67778887777655543
No 217
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=44.38 E-value=2.6e+02 Score=28.99 Aligned_cols=117 Identities=15% Similarity=0.061 Sum_probs=76.2
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh------hccCCC-----------ceEEEecCchhhHHHHHHH
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA------WEYTSA-----------DQFLHCLPLHHVHGLFNAL 230 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~------~~~~~~-----------d~~l~~~pl~h~~~~~~~~ 230 (359)
.++.++++....|. + ...+|.+.+...+..+... .|+.++ |++...++-+. ..+...
T Consensus 74 ~p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVAD 147 (746)
T ss_pred cCCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHH
Confidence 45666765332221 1 1357888887766665543 267776 88888887653 334467
Q ss_pred HHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEE
Q 018211 231 LAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (359)
Q Consensus 231 ~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~ 309 (359)
++++..|++.+.+. .+.++++... +...++.+++..+..+..+.... ..++.++.++
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~i----------l~~s~~~~lv~~~~~~~~l~~~~------------~~~~~l~~ii 205 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDI----------LNETKLEWLCLDLDLVEGLLERK------------NELPHLKKLI 205 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHH----------HhcCCCCEEEEcHHHHHHHHHhh------------ccCCCceEEE
Confidence 88999999988776 5666776666 77889999988777766665421 1245677766
Q ss_pred ecC
Q 018211 310 CGS 312 (359)
Q Consensus 310 ~~G 312 (359)
+-+
T Consensus 206 ~~~ 208 (746)
T PTZ00342 206 ILD 208 (746)
T ss_pred EEC
Confidence 654
No 218
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=43.91 E-value=1.8e+02 Score=27.27 Aligned_cols=72 Identities=19% Similarity=0.277 Sum_probs=50.4
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCC-----CCHHHHHHHHhhCCceEEEec-----cccHHHHHHH
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLST-----EDYREVLQNV 132 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~-----~~~~~~~~~~ 132 (359)
+++++||-|.+ .+.-|+...=++...|+.+|.++-+ .+++.++..+... .+.|+.- .-..+.+.++
T Consensus 69 l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~~dm~~i~~l 144 (374)
T COG0399 69 LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQPCDMDAIMAL 144 (374)
T ss_pred cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccCCCCHHHHHHH
Confidence 58999995443 4678889999999999999998654 4788888877764 4544432 2345666666
Q ss_pred hhhcCC
Q 018211 133 ASKSGA 138 (359)
Q Consensus 133 ~~~~~~ 138 (359)
.++.+.
T Consensus 145 a~~~~l 150 (374)
T COG0399 145 AKRHGL 150 (374)
T ss_pred HHHcCC
Confidence 665543
No 219
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=43.42 E-value=82 Score=29.18 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=36.5
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCC-----CCHHHHHHHHhhCCceEEEe
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLS 121 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 121 (359)
+|+++||.|.+- ..-|....-|+..+|+.+|.++-+ .+++.+...++.-. +.|+.
T Consensus 60 l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 60 LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 688999988875 344566778888999988888654 46777877766444 54444
No 220
>PRK09088 acyl-CoA synthetase; Validated
Probab=42.89 E-value=1.7e+02 Score=27.96 Aligned_cols=77 Identities=13% Similarity=-0.041 Sum_probs=54.6
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..++|++...++-+... +..+++++..|+..+..+. ...+.+...
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~---------- 89 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL--VALHFACARVGAIYVPLNWRLSASELDAL---------- 89 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEeeCccCCHHHHHHH----------
Confidence 57888887776665544 4678899999888887653 3457899999999998874 455555555
Q ss_pred CCCCcceeeecch
Q 018211 265 RAGEAITAFTGVP 277 (359)
Q Consensus 265 i~~~~vt~~~~~P 277 (359)
+++.+++.++...
T Consensus 90 ~~~~~~~~ii~~~ 102 (488)
T PRK09088 90 LQDAEPRLLLGDD 102 (488)
T ss_pred HHhCCCCEEEEcc
Confidence 5666777665544
No 221
>PLN02614 long-chain acyl-CoA synthetase
Probab=41.69 E-value=1.8e+02 Score=29.57 Aligned_cols=83 Identities=7% Similarity=-0.134 Sum_probs=60.2
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|++.+...+..+... .|..++|++...++-+.- ++...++++..|+..+.... +.++++...
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~i---------- 146 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFI---------- 146 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHH----------
Confidence 46888887776665543 578899999999887654 33458899999999988864 455555555
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+...++..++.....+..+
T Consensus 147 l~~~~~~~vi~~~~~~~~~ 165 (666)
T PLN02614 147 ISHSEVSIVFVEEKKISEL 165 (666)
T ss_pred HhccCCCEEEECHHHHHHH
Confidence 7778888888776654443
No 222
>PRK13390 acyl-CoA synthetase; Provisional
Probab=41.31 E-value=2.6e+02 Score=26.90 Aligned_cols=77 Identities=9% Similarity=-0.008 Sum_probs=54.5
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..++|++....+-+...- ..+++++..|+..+..+. +.+..+-..
T Consensus 24 ~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~--~~~la~~~~Ga~~~~l~~~~~~~~~~~~---------- 91 (501)
T PRK13390 24 QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL--VVLWAALRSGLYITAINHHLTAPEADYI---------- 91 (501)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH--HHHHHHHHhCCEEeccccCCCHHHHHHH----------
Confidence 58999888877766654 47889999999888876543 458899999999887764 444444444
Q ss_pred CCCCcceeeecch
Q 018211 265 RAGEAITAFTGVP 277 (359)
Q Consensus 265 i~~~~vt~~~~~P 277 (359)
+...++..+....
T Consensus 92 ~~~~~~~~~i~~~ 104 (501)
T PRK13390 92 VGDSGARVLVASA 104 (501)
T ss_pred HHhcCCcEEEEcc
Confidence 5556666665544
No 223
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=41.28 E-value=1.7e+02 Score=28.24 Aligned_cols=83 Identities=12% Similarity=0.057 Sum_probs=59.3
Q ss_pred hhhhhHHHHHHHHHHH---hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+.. ..+..++|++....|-.... ...+++++..|+..+..+. ...+.+...
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~~~~~---------- 78 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAF--FEAAYAAMRLGAYAVPVNWHFKPEEIAYI---------- 78 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCcccCHHHHHHH----------
Confidence 4677777666555544 35788999999998887543 3458899999999998875 445555555
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+++.+++.++........+
T Consensus 79 l~~~~~~~i~~~~~~~~~~ 97 (509)
T PRK12406 79 LEDSGARVLIAHADLLHGL 97 (509)
T ss_pred HhccCCcEEEEccchhhhh
Confidence 7778888888776665544
No 224
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=40.95 E-value=1.7e+02 Score=28.60 Aligned_cols=82 Identities=16% Similarity=0.072 Sum_probs=59.1
Q ss_pred hhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
..+|+..+...+..+... .+..++|++...++-+...- ..+++++..|+..+..+. +....+...
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~--~~~la~~~~G~~~v~v~~~~~~~~~~~~--------- 115 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYP--VAIAAVLRAGYVVVNVNPLYTPRELEHQ--------- 115 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH--HHHHHHHhcCeEEeccCcccCHHHHHHH---------
Confidence 368999998877666554 47888999999888765433 357899999999997764 445555555
Q ss_pred CCCCCcceeeecchHHHH
Q 018211 264 NRAGEAITAFTGVPTMYT 281 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~~~ 281 (359)
+++.+++.+.....+..
T Consensus 116 -~~~~~~~~vi~~~~~~~ 132 (557)
T PRK07059 116 -LKDSGAEAIVVLENFAT 132 (557)
T ss_pred -HHccCceEEEEchhhHH
Confidence 67778887777665543
No 225
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.76 E-value=3.2e+02 Score=26.80 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=69.9
Q ss_pred CCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHHH
Q 018211 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (359)
Q Consensus 14 ~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~~ 82 (359)
.|+.+|++. .+..+|+..+...+..+...+.. ++++.|++...+|-. .-+.
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~------------------~~~~~d~~l~~lPl~H~~Gl~ 230 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG------------------GLTPDDVVLSWLPLFHIFGLI 230 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc------------------cCCCCceEEEecChHHHHHHH
Confidence 467777764 23688999999887777766643 278888877776654 4555
Q ss_pred HHHHHHHHhCCeeeecCC-CCCHHHHHHHHhhCCceEEEeccccHHH
Q 018211 83 AGVLGTWFSGCIAVPLAL-SYPESELLHVMHDSDISMVLSTEDYREV 128 (359)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (359)
..+++.+..|+..+...+ .+.++.+...+.+.++.++..-......
T Consensus 231 ~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ 277 (534)
T COG0318 231 VGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRE 277 (534)
T ss_pred HHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHH
Confidence 667777888988887775 6888888888888887777666554444
No 226
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=40.63 E-value=2.6e+02 Score=28.62 Aligned_cols=92 Identities=11% Similarity=0.096 Sum_probs=61.8
Q ss_pred CCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHHH
Q 018211 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (359)
Q Consensus 14 ~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~~ 82 (359)
.++.+|++. .+-.+|+..+...+..+.. . .++.++|++...+|-. ..+.
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~-----------------~~~~~~d~~l~~~Pl~h~~g~~ 422 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---I-----------------ADFTPNDRFMSALPLFHSFGLT 422 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-----------------hCCCccCeEEEcCcchhhhhhH
Confidence 456666653 1357888888776655442 2 4778899988877742 3344
Q ss_pred HHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc
Q 018211 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (359)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (359)
..+++.+..|++.+..+.......+...+++.++.++......
T Consensus 423 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 423 VGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred HHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHH
Confidence 5677888899988866544455666777888888888765543
No 227
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=40.63 E-value=93 Score=29.07 Aligned_cols=55 Identities=13% Similarity=0.124 Sum_probs=34.3
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCC-----CCHHHHHHHHhhCCceEEEe
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLS 121 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 121 (359)
+++++||.|.+-.+ .+.....++...|+.++.++.+ .+.+++...++. +.+.|+.
T Consensus 66 l~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 66 LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred cCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 46889998877544 3444455666778877776543 345666666543 5666654
No 228
>PRK07470 acyl-CoA synthetase; Validated
Probab=40.17 E-value=2.1e+02 Score=27.74 Aligned_cols=67 Identities=13% Similarity=0.070 Sum_probs=46.0
Q ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeec-CCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 64 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
+..++|++....+-...+-...+..+..|+..+.+ ....+.+++...+++.++.++.........+.
T Consensus 202 ~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 202 GTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 56778888888876644333333445556655544 34678888999999999999998876665543
No 229
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=39.88 E-value=55 Score=22.90 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=30.8
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeee
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 97 (359)
.|+++|+.++.+..+..|.+.++=|.+++.-+-+.
T Consensus 10 agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~ 44 (87)
T cd07050 10 AGIAEGEALAYLIAPPLEAMYGLDAALKAADVELA 44 (87)
T ss_pred cCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeE
Confidence 79999999999999999999999999998855443
No 230
>PRK06060 acyl-CoA synthetase; Validated
Probab=39.48 E-value=1.8e+02 Score=29.68 Aligned_cols=81 Identities=21% Similarity=0.115 Sum_probs=56.5
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCC-ChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (359)
.+|+..+...+..+... .|..++|++...++-+...- ..+++++..|+..+..+.. ....+...
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~--~~~la~~~aG~~~vpi~p~~~~~~l~~~---------- 97 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLV--QLLLACLARGVMAFLANPELHRDDHALA---------- 97 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEecCCCCCHHHHHHH----------
Confidence 47888888776666554 47889999999988876543 4588999999988877643 34444443
Q ss_pred CCCCcceeeecchHHHH
Q 018211 265 RAGEAITAFTGVPTMYT 281 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~ 281 (359)
++..++..++.......
T Consensus 98 l~~~~~~~vi~~~~~~~ 114 (705)
T PRK06060 98 ARNTEPALVVTSDALRD 114 (705)
T ss_pred HhcCCCcEEEEchHHhh
Confidence 56667777766554433
No 231
>PRK08308 acyl-CoA synthetase; Validated
Probab=39.29 E-value=2.8e+02 Score=25.91 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=60.1
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHHHHHHHHHHHhCCeeeecCCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
-.+|++.+...+..+...+ ++..+|++....|-. ..++..++..+..|+..+.... .
T Consensus 119 v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~ 177 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL--------------------NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-K 177 (414)
T ss_pred EEEehHhHHHHHHHHHHhh--------------------CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-C
Confidence 4689888877665554433 556788877776654 3345567888889988776644 5
Q ss_pred CHHHHHHHHhhCCceEEEeccccHHHHHH
Q 018211 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (359)
.++.+...+++.++.+++........+..
T Consensus 178 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 206 (414)
T PRK08308 178 NPKFALNILRNTPQHILYAVPLMLHILGR 206 (414)
T ss_pred CHHHHHHHHHHhCCeEEEcCHHHHHHHHh
Confidence 66777788999999988887665554443
No 232
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=39.07 E-value=72 Score=23.70 Aligned_cols=32 Identities=9% Similarity=-0.066 Sum_probs=27.0
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCe
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (359)
.|+.+++.|.++|..+.....+.+.+..+|..
T Consensus 73 ~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 73 LGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 58889999999999888878888888888863
No 233
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=38.95 E-value=2.6e+02 Score=25.75 Aligned_cols=82 Identities=13% Similarity=0.150 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCC--------
Q 018211 30 DQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-------- 101 (359)
Q Consensus 30 ~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------- 101 (359)
.++......++..|.+ .+-|.|.++.+ ..+.+++.+|+..++..++.+..+
T Consensus 50 ~~~~~~~~~~~~~~~~--------------------~~Pd~Vlv~GD-~~~~la~alaA~~~~ipv~HieaGlRs~d~~~ 108 (346)
T PF02350_consen 50 KSTGLAIIELADVLER--------------------EKPDAVLVLGD-RNEALAAALAAFYLNIPVAHIEAGLRSGDRTE 108 (346)
T ss_dssp HHHHHHHHHHHHHHHH--------------------HT-SEEEEETT-SHHHHHHHHHHHHTT-EEEEES-----S-TTS
T ss_pred HHHHHHHHHHHHHHHh--------------------cCCCEEEEEcC-CchHHHHHHHHHHhCCCEEEecCCCCccccCC
Confidence 5555666677777766 23466665555 899999999999999999999877
Q ss_pred -CCHHHHHHHHhhCCceEEEeccccHHHHHHH
Q 018211 102 -YPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (359)
Q Consensus 102 -~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (359)
.+++..++++.+..--.+...+...+.+.+.
T Consensus 109 g~~de~~R~~i~~la~lhf~~t~~~~~~L~~~ 140 (346)
T PF02350_consen 109 GMPDEINRHAIDKLAHLHFAPTEEARERLLQE 140 (346)
T ss_dssp STTHHHHHHHHHHH-SEEEESSHHHHHHHHHT
T ss_pred CCchhhhhhhhhhhhhhhccCCHHHHHHHHhc
Confidence 5566677777766555555555555555554
No 234
>PLN02479 acetate-CoA ligase
Probab=38.69 E-value=2.2e+02 Score=28.10 Aligned_cols=82 Identities=13% Similarity=0.024 Sum_probs=60.8
Q ss_pred hhhhhHHHHHHHHHHHhh---ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+...+ |..++|++....|-+-.. +..+++++..|+..+..+. +..+.+...
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~~~~~~~~l~~~---------- 112 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM--YEAHFGVPMAGAVVNCVNIRLNAPTIAFL---------- 112 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH--HHHHHHHHhCCcEEEEeccccCHHHHHHH----------
Confidence 478888887777665544 788999999998876433 3457899999999988874 455666555
Q ss_pred CCCCcceeeecchHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~ 282 (359)
+++.++..++..+..+..
T Consensus 113 l~~~~~~~ii~~~~~~~~ 130 (567)
T PLN02479 113 LEHSKSEVVMVDQEFFTL 130 (567)
T ss_pred HhhcCceEEEEchhhhhH
Confidence 778899988887766543
No 235
>PLN03013 cysteine synthase
Probab=38.34 E-value=2.6e+02 Score=26.81 Aligned_cols=60 Identities=8% Similarity=-0.072 Sum_probs=45.8
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (359)
+.+|....+....+-.-+...+++...|..++.+-|...+.+....++..++++++++..
T Consensus 171 l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 171 ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 477865556666677777778888889987666666666677788899999999998754
No 236
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=38.16 E-value=1.3e+02 Score=30.19 Aligned_cols=95 Identities=20% Similarity=0.180 Sum_probs=63.4
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++++.. +..+|. .-.+|.+.|...+..+... .|..++|++...+|.+--. +..+++++..|+..+...
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeC
Confidence 4566665543 222222 2357888888766665543 4888999999999886543 345889999999988775
Q ss_pred -CCChhHHHHHHHhhcCCCCCCCCCcceeeecch
Q 018211 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (359)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (359)
.+..+.+... +...++..++...
T Consensus 141 ~~~~~~~l~~~----------l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAAR----------IDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHH----------HHhcCCcEEEEcc
Confidence 5666666666 5666777666543
No 237
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=37.76 E-value=1.2e+02 Score=26.35 Aligned_cols=77 Identities=16% Similarity=0.377 Sum_probs=46.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHH---HHHHHhhCCceEEEeccccHH-HHHHHhhhcCCceeccCC
Q 018211 70 RIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESE---LLHVMHDSDISMVLSTEDYRE-VLQNVASKSGAKFSLIPP 145 (359)
Q Consensus 70 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~ 145 (359)
+..+..++...++.-.+++-..+..-.--....++++ +...+++.+++++|++..... .+..+.+..+.++..++.
T Consensus 151 ~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~e~~~~~~~~~~la~~~g~~vv~ld~ 230 (256)
T PF01297_consen 151 RPVVVYHDAFQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKVKCIFTEPQFSSKLAEALAKETGVKVVYLDP 230 (256)
T ss_dssp GEEEEEESTTHHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT-SEEEEETTS-THHHHHHHHCCT-EEEESST
T ss_pred CeEEEEChHHHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCCcEEEecCCCChHHHHHHHHHcCCcEEEeCC
Confidence 6778888899999888877776655111123345555 455568889999999875544 344455555655555544
Q ss_pred C
Q 018211 146 V 146 (359)
Q Consensus 146 ~ 146 (359)
.
T Consensus 231 l 231 (256)
T PF01297_consen 231 L 231 (256)
T ss_dssp T
T ss_pred C
Confidence 4
No 238
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=37.61 E-value=1.6e+02 Score=28.98 Aligned_cols=80 Identities=13% Similarity=0.129 Sum_probs=57.4
Q ss_pred hhhhhhHHHHHHHHHHHhh----ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCC
Q 018211 188 VVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~ 262 (359)
..+|...+...+..+...+ +..++|++...++-+-. ....+++++..|+..+.... +..+.+...
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~~~~~~~~~~l~~~-------- 117 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ--YPIAVFGALRAGLIVVNTNPLYTAREMRHQ-------- 117 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeccCccCCHHHHHHH--------
Confidence 3578888887776666543 67899999998887654 33468899999999987764 455666555
Q ss_pred CCCCCCcceeeecchHH
Q 018211 263 GNRAGEAITAFTGVPTM 279 (359)
Q Consensus 263 ~~i~~~~vt~~~~~P~~ 279 (359)
+++.++..+...+.+
T Consensus 118 --l~~~~~~~~i~~~~~ 132 (562)
T PRK12492 118 --FKDSGARALVYLNMF 132 (562)
T ss_pred --HhccCceEEEecccc
Confidence 667777777665543
No 239
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=37.41 E-value=3.6e+02 Score=25.49 Aligned_cols=63 Identities=10% Similarity=-0.072 Sum_probs=38.1
Q ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCC-HHHHHHHHhhCCceEEEeccccHH
Q 018211 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYP-ESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 64 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~-~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
..-.|.+|+++.+....+-++-+-.- +|+.++.+..... .+.....++.......+.+.....
T Consensus 270 ~~l~Gkrv~i~gd~~~~~~l~~~L~e-lGm~~v~~~t~~~~~~~~~~~~~~l~~~~~v~~~~d~~ 333 (407)
T TIGR01279 270 QLLRGKKIFFFGDNLLELPLARFLKR-CGMEVVECGTPYIHRRFHAAELALLEGGVRIVEQPDFH 333 (407)
T ss_pred HhcCCCEEEEECCchHHHHHHHHHHH-CCCEEEEecCCCCChHHHHHHHhhcCCCCeEEeCCCHH
Confidence 33469999999987665555554444 8998888866554 333355555554444444443333
No 240
>PRK06381 threonine synthase; Validated
Probab=37.41 E-value=2.3e+02 Score=25.63 Aligned_cols=55 Identities=13% Similarity=-0.005 Sum_probs=40.6
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
+....+-.-+...+++...|..+..+-|...+......++..++++++++..+.+
T Consensus 67 v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~~ 121 (319)
T PRK06381 67 TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYEE 121 (319)
T ss_pred EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHHH
Confidence 4455677778888888999986666555555555667899999999999876443
No 241
>PRK13382 acyl-CoA synthetase; Provisional
Probab=37.27 E-value=2.1e+02 Score=28.00 Aligned_cols=82 Identities=15% Similarity=0.079 Sum_probs=58.6
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCC-ChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..++|++...++-+-. .+..+++++..|+..+..+.. ....+-..
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~---------- 135 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEV---------- 135 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHH----------
Confidence 57888887766665554 478899999999887654 345689999999999988754 44444444
Q ss_pred CCCCcceeeecchHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~ 282 (359)
+.+.+++.++....+...
T Consensus 136 l~~~~~~~vi~~~~~~~~ 153 (537)
T PRK13382 136 VTREGVDTVIYDEEFSAT 153 (537)
T ss_pred HHhcCCCEEEEchhhHHH
Confidence 677888888776555443
No 242
>PRK06178 acyl-CoA synthetase; Validated
Probab=37.23 E-value=1.9e+02 Score=28.35 Aligned_cols=84 Identities=12% Similarity=0.051 Sum_probs=60.9
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..+++++....|-+...- ..+++++..|+..+..+. .....+...
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~p~~~~~~~~~~---------- 125 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH--IVFFGILKLGAVHVPVSPLFREHELSYE---------- 125 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH--HHHHHHHHhCeEEeecCCCCCHHHHHHH----------
Confidence 57888888776665553 47788999999888876543 458889999999887764 455555555
Q ss_pred CCCCcceeeecchHHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l~ 284 (359)
+++.++..++..+.....+.
T Consensus 126 l~~~~~~~ii~~~~~~~~l~ 145 (567)
T PRK06178 126 LNDAGAEVLLALDQLAPVVE 145 (567)
T ss_pred HHhcCCcEEEEccchHHHHH
Confidence 77788888888777665443
No 243
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=36.96 E-value=1.2e+02 Score=28.20 Aligned_cols=55 Identities=9% Similarity=0.039 Sum_probs=34.7
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCC-----CCHHHHHHHHhhCCceEEEe
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLS 121 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 121 (359)
.++++||.|.+-.+..+ ...-++...|+.++.++.+ .+.+++...++. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 46788998877655433 3345566778877776532 456777776654 5666653
No 244
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=36.92 E-value=3.5e+02 Score=29.32 Aligned_cols=97 Identities=12% Similarity=0.048 Sum_probs=66.5
Q ss_pred CCCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHH
Q 018211 13 MARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEF 81 (359)
Q Consensus 13 ~~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~ 81 (359)
..++.+|++. ++-.+|...+...+...... .++.++|++...+|-. ..+
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~p~~h~~g~ 838 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV--------------------FNLRNDDVILSSLPFFHSFGL 838 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh--------------------cCCCCCCEEEEcCcHHHHHhH
Confidence 3467777763 13578888887766554332 4667888877666532 223
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHH
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (359)
....++.+..|+..+......+.+.+...+++.++.++.........+
T Consensus 839 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 839 TVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 334567778898888776667888889999999999998877655444
No 245
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=36.84 E-value=2e+02 Score=22.43 Aligned_cols=45 Identities=11% Similarity=0.073 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
.-..+....+...|.-++-+..+.+.+++...+.+.++++|..+.
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344455566778899999999999999999999999999998764
No 246
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=36.70 E-value=67 Score=28.61 Aligned_cols=52 Identities=8% Similarity=-0.003 Sum_probs=40.9
Q ss_pred cccHHHHHH-----HHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCe
Q 018211 26 SYSYDQLAS-----SALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (359)
Q Consensus 26 ~~Ty~el~~-----~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (359)
.+.|.++.. ....+...|.+ .|+.+++.|.++|.++...-.+++++..+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~-----------------~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFG-----------------RGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHh-----------------cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 566777653 13556566666 69999999999999999999999999999975
No 247
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=36.58 E-value=3.7e+02 Score=25.30 Aligned_cols=63 Identities=13% Similarity=-0.024 Sum_probs=38.4
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCC-CHHHHHHHHhhCCceEEEeccccHHH
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY-PESELLHVMHDSDISMVLSTEDYREV 128 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (359)
.-.|.+|+|+......+-++-+..- +|+.++.+.... ..+.....++.......+.+......
T Consensus 273 ~l~Gkrv~i~g~~~~~~~la~~L~e-lGm~vv~~~t~~~~~~~~~~~~~~l~~~~~v~~~~d~~~ 336 (396)
T cd01979 273 LLRGKSIFFMGDNLLEIPLARFLTR-CGMIVVEVGTPYLDKRFQAAELELLPPMVRIVEKPDNYR 336 (396)
T ss_pred hhcCCEEEEECCchHHHHHHHHHHH-CCCEEEeeCCCcCChHHHHHHHHhcCCCCeEEECCCHHH
Confidence 3468899999887755555555554 999988886554 33333445555544555555433333
No 248
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=36.19 E-value=3.2e+02 Score=24.75 Aligned_cols=60 Identities=7% Similarity=-0.011 Sum_probs=44.5
Q ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc
Q 018211 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (359)
Q Consensus 64 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (359)
|..+++.|.... .+-.-....+++...|..++.+-|...+......++..++++++++..
T Consensus 47 g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 47 GLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred hcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 334456655544 466677778888899987777766666677788899999999998765
No 249
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=36.07 E-value=1.1e+02 Score=22.12 Aligned_cols=32 Identities=9% Similarity=-0.150 Sum_probs=26.7
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCe
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (359)
.+..+++.|.++|.++.....+...+..+|..
T Consensus 61 ~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 61 PKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred cCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 47778899999999998877788888888864
No 250
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=35.78 E-value=1.5e+02 Score=27.32 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=44.3
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
.++++|++|+|+.--..-++...+|-.. |+.++-++.+.. .....++.+++.++...
T Consensus 162 ~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~~---K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 162 ANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSEE---KLELAKKLGADHVINSS 218 (339)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCChH---HHHHHHHhCCcEEEEcC
Confidence 5899999999998888988888888755 587777766533 34456788888888765
No 251
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=35.71 E-value=1.1e+02 Score=25.26 Aligned_cols=51 Identities=8% Similarity=-0.067 Sum_probs=35.2
Q ss_pred CccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCC
Q 018211 24 QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGC 93 (359)
Q Consensus 24 ~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 93 (359)
+..+||.|+.+.+.++|..+.+. ....+.+.+...++-..++..+|- .+|.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~------------------~~~~~~viV~i~~gg~~~A~~La~-~l~~ 64 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD------------------LADENPLVLCVMGGGLVFTGQLLP-RLDF 64 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH------------------cCCCCeEEEEECCCcHHHHHHHHH-HcCC
Confidence 55689999999999999999872 222223556666676666666664 3453
No 252
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=35.22 E-value=3.3e+02 Score=24.33 Aligned_cols=57 Identities=16% Similarity=0.001 Sum_probs=42.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 66 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
.+|+.|+. ...+..-....+++.+.|..+..+-|...+......++..++++++++.
T Consensus 57 ~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 57 KPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 66776544 5556777777888888998776666665556667789999999999875
No 253
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=34.35 E-value=3.1e+02 Score=26.64 Aligned_cols=79 Identities=15% Similarity=0.078 Sum_probs=54.2
Q ss_pred hhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
..+|...+...+..+... .+..++|++....+-+... ...+++++..|+..+..+. ...+.+...
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~--------- 120 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEF--TALYLACARIGAVLNPLMPIFRERELSFM--------- 120 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCEEEeccCcccCHHHHHHH---------
Confidence 357888887766665544 4788899999888875433 3457899999999887764 445555544
Q ss_pred CCCCCcceeeecchH
Q 018211 264 NRAGEAITAFTGVPT 278 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~ 278 (359)
++..+++.++..+.
T Consensus 121 -l~~~~~~~li~~~~ 134 (538)
T TIGR03208 121 -LNHADSKVFVVPSV 134 (538)
T ss_pred -HHhcCCeEEEEccc
Confidence 55667776665443
No 254
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=34.26 E-value=3.2e+02 Score=24.32 Aligned_cols=71 Identities=11% Similarity=0.234 Sum_probs=41.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHH---HHHHhhCCceEEEeccccH-HHHHHHhhhcCC
Q 018211 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL---LHVMHDSDISMVLSTEDYR-EVLQNVASKSGA 138 (359)
Q Consensus 68 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l---~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~ 138 (359)
..+..+...+...++.-.+++-..+..-+--...-++.++ ...+++.++++||++.... +.+..+.+..+.
T Consensus 178 ~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 178 KTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred CCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 3566777888888887777655444221111223355544 5556688899999977543 344444444443
No 255
>PRK06382 threonine dehydratase; Provisional
Probab=34.10 E-value=2.4e+02 Score=26.69 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=40.0
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
+....+-......+++...|..+..+-|...+......++..+++++++...+.+
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 3444466667778889999986666666655566677799999999998875443
No 256
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=34.07 E-value=64 Score=27.01 Aligned_cols=35 Identities=6% Similarity=-0.002 Sum_probs=29.1
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~ 76 (359)
.-+||.++.+.+..+|..+.+ .|.+|.-.|+|--.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~-----------------s~~~PDvIiaiaRG 39 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRA-----------------SGFKPDVIVAIARG 39 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHH-----------------cCCCCCEEEEEcCC
Confidence 468999999999999999998 57788777776533
No 257
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=33.71 E-value=2.1e+02 Score=27.93 Aligned_cols=81 Identities=12% Similarity=-0.086 Sum_probs=57.1
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .+..++|++....|-....- ..+++++..|+..+..+. +..+.+...
T Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 106 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL--EAWYGIMGIGAICHTVNPRLFPEQIAWI---------- 106 (542)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH--HHHHHHHhcCeEeeccccccCHHHHHHH----------
Confidence 57888887776666554 47888999998887765443 357889999999988864 445555555
Q ss_pred CCCCcceeeecchHHHH
Q 018211 265 RAGEAITAFTGVPTMYT 281 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~ 281 (359)
+++.++..++....+..
T Consensus 107 l~~~~~~~i~~~~~~~~ 123 (542)
T PRK06018 107 INHAEDRVVITDLTFVP 123 (542)
T ss_pred HhccCCCEEEEccccHH
Confidence 66677777776554443
No 258
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=32.90 E-value=2.7e+02 Score=26.78 Aligned_cols=83 Identities=12% Similarity=0.033 Sum_probs=57.9
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|..++...+..+... .+..+++++...++-.. ..+..+++++..|+..+..+. ++...+...
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~---------- 97 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGV--DFPIAFLGAIRAGIVPVALNTLLTADDYAYM---------- 97 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeeccCCCCHHHHHHH----------
Confidence 47888887766655543 47788899888776654 444568899999999988864 455555555
Q ss_pred CCCCcceeeecchHHHHHH
Q 018211 265 RAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~~l 283 (359)
+.+.+++.++..+.....+
T Consensus 98 ~~~~~~~~~i~~~~~~~~~ 116 (508)
T TIGR02262 98 LEDSRARVVFVSGELLPVI 116 (508)
T ss_pred HHhcCCeEEEEchhhHHHH
Confidence 6677888887766554433
No 259
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.76 E-value=2.6e+02 Score=27.29 Aligned_cols=81 Identities=15% Similarity=0.067 Sum_probs=57.1
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|+..+...+..+... .+..++|++....+-.-. .+..+++++..|++.+..+. ....++...
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~---------- 109 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE--FVESVLAANMLGAIAVPVNFRLTPPEIAFL---------- 109 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEEcCccCCHHHHHHH----------
Confidence 58888888776665544 378889999888776544 34468899999999998764 455555555
Q ss_pred CCCCcceeeecchHHHH
Q 018211 265 RAGEAITAFTGVPTMYT 281 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~ 281 (359)
+++.++..++..+....
T Consensus 110 l~~~~~~~ii~~~~~~~ 126 (542)
T PRK07786 110 VSDCGAHVVVTEAALAP 126 (542)
T ss_pred HHhCCCcEEEEccchHH
Confidence 66677777766655443
No 260
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=32.63 E-value=4.6e+02 Score=25.41 Aligned_cols=95 Identities=12% Similarity=0.079 Sum_probs=63.3
Q ss_pred CCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHH-
Q 018211 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVA- 83 (359)
Q Consensus 14 ~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~- 83 (359)
.++.+|++. .+..+|...+...+..... . .++.++|++....|....+-.
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~l~~~P~~h~~~~~ 240 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-----------------CWLTQQTRYLCALPAAHNYPLS 240 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---h-----------------cCCCcCCEEEECCChHhhhhhh
Confidence 456666653 1357788887766554432 2 477889988887775432221
Q ss_pred --HHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHH
Q 018211 84 --GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (359)
Q Consensus 84 --~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (359)
..++++..|++.+.. +...+..+...+++.++.++.........+
T Consensus 241 ~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 241 SPGALGVFYAGGCVVLA-PDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred HHHHHHHHhcCCeEEEC-CCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 356778889887664 445667777888999999998877655444
No 261
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=32.27 E-value=98 Score=28.20 Aligned_cols=54 Identities=15% Similarity=0.028 Sum_probs=41.0
Q ss_pred cccHHHHHHH------HHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeee
Q 018211 26 SYSYDQLASS------ALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (359)
Q Consensus 26 ~~Ty~el~~~------~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 96 (359)
.+.|.++.+. ...+...+.+ +|+.+++.|.++|..+.....+++++..+|..-+
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~-----------------~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQ-----------------EGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHh-----------------cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 3556655432 3556666766 6999999999999999999999999999997534
No 262
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=32.19 E-value=2.3e+02 Score=26.85 Aligned_cols=57 Identities=12% Similarity=0.021 Sum_probs=47.2
Q ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeec--CCCCCHHHHHHHHhhCCceEEE
Q 018211 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL--ALSYPESELLHVMHDSDISMVL 120 (359)
Q Consensus 64 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi 120 (359)
.--+|-+|+.+.+-.++..+....+...|+-+... ||-.+.+++...|.+.++.+.-
T Consensus 28 ~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a 86 (406)
T TIGR00936 28 KPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFA 86 (406)
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEE
Confidence 33568999999999999999999999999976655 7777788888888888888664
No 263
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=32.04 E-value=5.1e+02 Score=28.21 Aligned_cols=96 Identities=10% Similarity=0.109 Sum_probs=64.3
Q ss_pred CCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHHH
Q 018211 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (359)
Q Consensus 14 ~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~~ 82 (359)
.|+.+|.+. ++-.+|.+.+...+...... .+++++|++...+|-. ..+.
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~~ 850 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR--------------------IDFSPEDKVFNALPVFHSFGLT 850 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh--------------------hCCCCcCEEEEecchHHHHHHH
Confidence 456666653 12467888887666655433 3667899988877643 2333
Q ss_pred HHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHH
Q 018211 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (359)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (359)
...+..+..|+..+..+.....+.+...+++.++.++.........+
T Consensus 851 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 851 GGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred HHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 45666777898887766555666777788899999888776554443
No 264
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=31.78 E-value=3.7e+02 Score=23.88 Aligned_cols=58 Identities=10% Similarity=-0.014 Sum_probs=43.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc
Q 018211 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (359)
Q Consensus 67 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (359)
+|+.|+. ...+-......+++.+.|..+..+-|...+......++..++++++++...
T Consensus 52 ~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 52 PGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred CCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 4565544 666777778888899999877666665555666778899999999998754
No 265
>PRK05852 acyl-CoA synthetase; Validated
Probab=31.49 E-value=4.9e+02 Score=25.23 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=59.1
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCC--HHHHHHHHHHHHhCCeeee-cCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVP-LALS 101 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~-l~~~ 101 (359)
-.+|+..+...+..+... .+++++|++....+.. ..++..+++.+..|.+.+. -...
T Consensus 194 v~~~~~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 253 (534)
T PRK05852 194 VPWTHANIASSVRAIITG--------------------YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGR 253 (534)
T ss_pred EEecHHHHHHHHHHHHHH--------------------hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcC
Confidence 467888877666555432 4667899887776654 3455567777777776543 2335
Q ss_pred CCHHHHHHHHhhCCceEEEeccccHHHHHH
Q 018211 102 YPESELLHVMHDSDISMVLSTEDYREVLQN 131 (359)
Q Consensus 102 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (359)
.++..+...+++.++.+++........+..
T Consensus 254 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 283 (534)
T PRK05852 254 FSAHTFWDDIKAVGATWYTAVPTIHQILLE 283 (534)
T ss_pred cCHHHHHHHHHHcCCcEEEcChHHHHHHHh
Confidence 667788888999999988887766555443
No 266
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=31.35 E-value=2.8e+02 Score=24.78 Aligned_cols=57 Identities=11% Similarity=0.027 Sum_probs=40.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccH
Q 018211 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (359)
Q Consensus 69 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (359)
+.|+.. ..+-.-....++|.+.|..++.+-|...+.+....++..++++++++.++.
T Consensus 66 ~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~ 122 (304)
T cd01562 66 KGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFD 122 (304)
T ss_pred CcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 344443 456777777788888997666665555556667789999999999987543
No 267
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=31.27 E-value=2.4e+02 Score=21.46 Aligned_cols=66 Identities=17% Similarity=0.281 Sum_probs=42.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHhCCee---------eecCCCCCHHHHHHH----HhhCCceEEEeccccHHHHHHH
Q 018211 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIA---------VPLALSYPESELLHV----MHDSDISMVLSTEDYREVLQNV 132 (359)
Q Consensus 66 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~---------v~l~~~~~~~~l~~~----l~~~~~~~vi~~~~~~~~~~~~ 132 (359)
..+..|+++.+ .+.+.. ...+|.-. ..++...+.+++... +.+-+.-+++.++...+.+...
T Consensus 3 ~~~~~IaVIGD--~Dtv~G---F~LaGi~~~~~~~~~nf~~v~~~t~~eei~~~~~~~l~~~digIIlIte~~a~~i~~~ 77 (115)
T TIGR01101 3 EKGKLIAVIGD--EDTVVG---FLLGGIGEINKNRHPNFLVVDKNTTVSEIEDCFNRFLKRDDIAIILINQHIAEMIRHA 77 (115)
T ss_pred CCCcEEEEEec--HHHHHH---HHHhCCCccccccccceeeecCCCCHHHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHH
Confidence 35778999998 666544 44556532 335555555665544 5556788888888777777665
Q ss_pred hhhc
Q 018211 133 ASKS 136 (359)
Q Consensus 133 ~~~~ 136 (359)
....
T Consensus 78 I~~~ 81 (115)
T TIGR01101 78 VDAH 81 (115)
T ss_pred HHhc
Confidence 5443
No 268
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=30.78 E-value=4.8e+02 Score=24.86 Aligned_cols=62 Identities=11% Similarity=-0.003 Sum_probs=37.9
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHH-HHHHHhhCCceEEEeccccH
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESE-LLHVMHDSDISMVLSTEDYR 126 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~-l~~~l~~~~~~~vi~~~~~~ 126 (359)
.-.|.+|+|+......+-++-+-.-.+|..++.+......++ +...++.......+.+....
T Consensus 287 ~l~Gkrvai~g~~~~~~~la~~L~eelGm~~v~v~t~~~~~~~~~~~~~~l~~~~~v~~~~D~ 349 (427)
T PRK02842 287 LLRGKRVFFLPDSQLEIPLARFLSRECGMELVEVGTPYLNRRFLAAELALLPDGVRIVEGQDV 349 (427)
T ss_pred hcCCcEEEEECCchhHHHHHHHHHHhCCCEEEEeCCCCCCHHHHHHHHHhccCCCEEEECCCH
Confidence 346889999988765665555533339999988876655333 24444555445455544333
No 269
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=30.50 E-value=2e+02 Score=25.01 Aligned_cols=88 Identities=10% Similarity=0.108 Sum_probs=52.1
Q ss_pred hcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCC
Q 018211 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (359)
Q Consensus 235 ~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~ 314 (359)
--|.++.+-.+.....+.+. +....+|++.-.+.....+... ++++.++.||..
T Consensus 92 ~~gd~Ifld~GtT~~~l~~~----------L~~~~ltVvTNs~~ia~~l~~~----------------~~~~vil~GG~~ 145 (240)
T PRK10411 92 EEGMVIALDASSTCWYLARQ----------LPDINIQVFTNSHPICQELGKR----------------ERIQLISSGGTL 145 (240)
T ss_pred CCCCEEEEcCcHHHHHHHHh----------hCCCCeEEEeCCHHHHHHHhcC----------------CCCEEEEECCEE
Confidence 34555555545455555555 4333577777667777666543 457788888864
Q ss_pred CC-------HHHHHHHHHHh-CCcccccccCCcCcccccccc
Q 018211 315 LP-------LPVMQQWETIT-GHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 315 l~-------~~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~~~ 348 (359)
-+ +...+.+.+.. +.-++..-|.++.+|+....+
T Consensus 146 ~~~~~~~~G~~a~~~l~~~~~d~afis~~gi~~~~G~~~~~~ 187 (240)
T PRK10411 146 ERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSGALWDSNA 187 (240)
T ss_pred eCCCCceECHHHHHHHHhcCCCEEEEeceeECCCCCcccCCH
Confidence 33 23444454432 667888888886666655544
No 270
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=30.32 E-value=2e+02 Score=27.64 Aligned_cols=78 Identities=9% Similarity=-0.063 Sum_probs=53.6
Q ss_pred hhhhhHHHHHHHHHHHhh---ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCC-ChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+...+ +..++|++....+.+-..- ..+++++..|+..+..+.. ..+.+...
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~---------- 92 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHML--VAFLGSIKSGHAYIPVDTSIPSERIEMI---------- 92 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHH--HHHHHHHHhCCEEeCCCCcChHHHHHHH----------
Confidence 588888888777666543 6778888888888765443 3588999999998877654 44444444
Q ss_pred CCCCcceeeecchH
Q 018211 265 RAGEAITAFTGVPT 278 (359)
Q Consensus 265 i~~~~vt~~~~~P~ 278 (359)
+++.++..+...+.
T Consensus 93 ~~~~~~~~ii~~~~ 106 (502)
T TIGR01734 93 IEAAGPELVIHTAE 106 (502)
T ss_pred HHhcCCCEEEeccc
Confidence 55566666665443
No 271
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=30.28 E-value=1.9e+02 Score=28.29 Aligned_cols=75 Identities=16% Similarity=0.017 Sum_probs=53.2
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .|..++|++...+|-+-. .+..+++++..|+..+..+. +..+.+...
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~---------- 116 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE--FTIIYLACLKVGAVSVPLLPSWREAELVWV---------- 116 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccchhcCHHHHHHH----------
Confidence 57888888766665554 478899999998877643 33468899999999987764 455555554
Q ss_pred CCCCcceeeec
Q 018211 265 RAGEAITAFTG 275 (359)
Q Consensus 265 i~~~~vt~~~~ 275 (359)
++..++..++.
T Consensus 117 l~~~~~~~l~~ 127 (547)
T PRK06087 117 LNKCQAKMFFA 127 (547)
T ss_pred HHhcCCeEEEE
Confidence 55566666654
No 272
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=30.26 E-value=3.2e+02 Score=27.23 Aligned_cols=102 Identities=11% Similarity=0.068 Sum_probs=65.4
Q ss_pred CCCCcEEEEec--CCCCCCcchhhhhhhHHHHHHHHHHHhh--ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEc
Q 018211 168 RGEDPALIVYT--SGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (359)
Q Consensus 168 ~~~~~~~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~ 243 (359)
.++.++++... .+++|. ...+|...+...+..+...+ ...++|++...++-+.- ++..+++++..|+..+..
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEec
Confidence 45666665432 112232 23578888887776665544 25789999999988754 345688999999998866
Q ss_pred -CC-CC--hhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHH
Q 018211 244 -PK-FS--VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 244 -~~-~~--~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 283 (359)
+. .. .+.+... ++..++..++..+.....+
T Consensus 123 ~~~~~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 123 FAPELPGHAERLDTA----------LRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCCcchhHHHHHHH----------HHhCCCCEEEEcHHHHHHH
Confidence 22 22 3444444 6777888888776655443
No 273
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=30.24 E-value=3.5e+02 Score=27.39 Aligned_cols=81 Identities=9% Similarity=-0.168 Sum_probs=58.5
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+... .|..++|++...++-+.- .+...++++..|+..+.... +.++++...
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~i---------- 143 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYI---------- 143 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHH----------
Confidence 36888888877666554 478899999988887654 33457889999999887764 555655555
Q ss_pred CCCCcceeeecchHHHH
Q 018211 265 RAGEAITAFTGVPTMYT 281 (359)
Q Consensus 265 i~~~~vt~~~~~P~~~~ 281 (359)
+...+++.++.....+.
T Consensus 144 l~~~~~~~v~~~~~~~~ 160 (660)
T PLN02430 144 VDHAEIDFVFVQDKKIK 160 (660)
T ss_pred HhccCCCEEEECHHHHH
Confidence 77788888887665433
No 274
>PRK12582 acyl-CoA synthetase; Provisional
Probab=30.22 E-value=2.1e+02 Score=28.71 Aligned_cols=56 Identities=14% Similarity=-0.006 Sum_probs=42.8
Q ss_pred hhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC
Q 018211 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~ 245 (359)
-.+|++.+...+..+... .|..++|++...++-+. .....+++++..|+..+..+.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccC
Confidence 368899888877766654 47889999999988654 334468899999999988764
No 275
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=30.06 E-value=1.3e+02 Score=28.99 Aligned_cols=59 Identities=14% Similarity=0.060 Sum_probs=41.5
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCC-CCCHHHHHHHHhhCCceEEEeccc
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-SYPESELLHVMHDSDISMVLSTED 124 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~vi~~~~ 124 (359)
..+||+|++=-| +.......+-...+..+.||++. ....+.+...+++.+++++++...
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 357888876555 55555565655555566666643 678899999999989999987643
No 276
>PRK07867 acyl-CoA synthetase; Validated
Probab=29.99 E-value=3.3e+02 Score=26.49 Aligned_cols=82 Identities=9% Similarity=-0.147 Sum_probs=58.5
Q ss_pred hhhhhHHHHHHHHHHHhh----ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
.+|...+...+..+...+ +..+++++...+|-+- .....+++++..|+.++..+. ..++.+...
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~--------- 96 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARD--------- 96 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHH---------
Confidence 478888888777666544 4567788888887654 334458899999999997764 556666555
Q ss_pred CCCCCcceeeecchHHHHH
Q 018211 264 NRAGEAITAFTGVPTMYTR 282 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~~~~ 282 (359)
+++.++..++........
T Consensus 97 -l~~~~~~~li~~~~~~~~ 114 (529)
T PRK07867 97 -IAHADCQLVLTESAHAEL 114 (529)
T ss_pred -HHhCCCeEEEECHhHHHH
Confidence 777888888887766553
No 277
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=29.81 E-value=1.3e+02 Score=23.42 Aligned_cols=55 Identities=9% Similarity=-0.033 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEc--CCCHHHHHHHHHHHHhCCeeeec
Q 018211 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA--KPSFEFVAGVLGTWFSGCIAVPL 98 (359)
Q Consensus 28 Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~--~n~~~~~~~~lA~~~~G~~~v~l 98 (359)
....-.+.-..+++.+... +.+++||.+.++. .|++..+-+...+...|+..+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~----------------~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 80 AISNDLEYDEGFARQLLAL----------------YDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHHTTGGGTHHHHHHHH----------------TT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhcccchhhHHHHHHHHH----------------cCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 4444445556667666653 5689999877775 56688898999999999887765
No 278
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.26 E-value=2.6e+02 Score=27.41 Aligned_cols=79 Identities=16% Similarity=0.164 Sum_probs=55.7
Q ss_pred hhhhhHHHHHHHHHHHh----hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (359)
.+|...+...+..+... .+..++|++....+-... +...+++++..|+..+..+. ...+.+...
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~--------- 116 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQ--YPIALFGILRAGMIVVNVNPLYTPRELEHQ--------- 116 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccCccCCHHHHHHH---------
Confidence 57888887776666554 467788999888776533 34468899999999998865 444555454
Q ss_pred CCCCCcceeeecchHH
Q 018211 264 NRAGEAITAFTGVPTM 279 (359)
Q Consensus 264 ~i~~~~vt~~~~~P~~ 279 (359)
+++.+++.+...+.+
T Consensus 117 -l~~~~~~~ii~~~~~ 131 (560)
T PRK08974 117 -LNDSGAKAIVIVSNF 131 (560)
T ss_pred -HHhcCceEEEEeccc
Confidence 667777777665543
No 279
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=29.17 E-value=3.1e+02 Score=26.25 Aligned_cols=55 Identities=9% Similarity=0.090 Sum_probs=27.4
Q ss_pred CCCCCeEEEEcCCCHHHHHHH--HHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEe
Q 018211 65 GGCGARIGIVAKPSFEFVAGV--LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS 121 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~--lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 121 (359)
+++||.|.+. ++.+.....+ ..+.+.|+.+..++...+.++++..++. +.++|+.
T Consensus 97 l~~GD~VI~~-~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 97 CSSGDHLLCS-STVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred cCCCCEEEEC-CCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 5666665442 2333222222 2245566666666665555666665543 4455554
No 280
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=29.14 E-value=2.5e+02 Score=26.59 Aligned_cols=76 Identities=14% Similarity=-0.037 Sum_probs=52.3
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i 265 (359)
.+|+..+...+..+... .+..++|++....+-....- ..+++++..|+..+..+...+.+.++.+ +
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~---------~ 96 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETL--LAYLALLQCGARVLPLNPQLPQPLLEEL---------L 96 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH--HHHHHHHHcCCEEeecCCCCCHHHHHHH---------H
Confidence 58888888877776654 36788999998887765443 3578999999999988754443333332 4
Q ss_pred CCCcceeeec
Q 018211 266 AGEAITAFTG 275 (359)
Q Consensus 266 ~~~~vt~~~~ 275 (359)
.+.++..+..
T Consensus 97 ~~~~~~~~i~ 106 (458)
T PRK09029 97 PSLTLDFALV 106 (458)
T ss_pred HhcCCCEEEE
Confidence 5556655554
No 281
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.11 E-value=2e+02 Score=28.15 Aligned_cols=67 Identities=7% Similarity=-0.064 Sum_probs=48.3
Q ss_pred ccCCCCCeEEEEcCCCHH-HHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHH
Q 018211 63 LAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (359)
.++.++|++....|-.-. .....++.+..|+..+...+....+.+...+++.++.++.........+
T Consensus 214 ~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l 281 (539)
T PRK07008 214 MGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGL 281 (539)
T ss_pred cCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHH
Confidence 577889988877654321 1223467778999888777777888999999999999988776554443
No 282
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=29.00 E-value=3.4e+02 Score=22.63 Aligned_cols=122 Identities=13% Similarity=0.076 Sum_probs=0.0
Q ss_pred hhhhhhHHHHHHHHHHHhhc----cCCCceEEEecCc--hhhHHHHHHHHHhhhcCcEEE-EcCCCChhHHHHHHHhhcC
Q 018211 188 VVHTHKSIDAQVQMLTEAWE----YTSADQFLHCLPL--HHVHGLFNALLAPLYAGATVE-FMPKFSVRGIWQRWRESYP 260 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~~----~~~~d~~l~~~pl--~h~~~~~~~~~~~l~~G~~i~-~~~~~~~~~~~~~~~~~~~ 260 (359)
+.+.-..+-..+..+...+. .....+++...+. .|..|....-..-=..|-.++ +..+..++++.+.
T Consensus 57 ~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~------ 130 (197)
T TIGR02370 57 VMMSADAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEK------ 130 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHH------
Q ss_pred CCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHHH
Q 018211 261 VNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQW 323 (359)
Q Consensus 261 ~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~ 323 (359)
+++.++..+.++-.+...+... .......++.....==.+++||.++.+++.+.+
T Consensus 131 ----~~~~~pd~v~lS~~~~~~~~~~----~~~i~~l~~~~~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 131 ----VKKEKPLMLTGSALMTTTMYGQ----KDINDKLKEEGYRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred ----HHHcCCCEEEEccccccCHHHH----HHHHHHHHHcCCCCCCEEEEEChhcCHHHHHHh
No 283
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=28.93 E-value=3.9e+02 Score=27.31 Aligned_cols=86 Identities=5% Similarity=-0.079 Sum_probs=61.4
Q ss_pred hhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCC
Q 018211 187 GVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVN 262 (359)
Q Consensus 187 ~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~ 262 (359)
...+|.+.+...+..+... .|..++|++...++-+. .++...++++..|+..+... .+.++.+...
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~i-------- 188 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYA-------- 188 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhh--------
Confidence 4578999888877766554 47889999999888764 34456888999998887665 4555555444
Q ss_pred CCCCCCcceeeecchHHHHHHH
Q 018211 263 GNRAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 263 ~~i~~~~vt~~~~~P~~~~~l~ 284 (359)
+...++..++.....+..+.
T Consensus 189 --l~~s~~~~lv~~~~~~~~l~ 208 (700)
T PTZ00216 189 --LRETECKAIVCNGKNVPNLL 208 (700)
T ss_pred --hhccCccEEEECHHHHHHHH
Confidence 77778888887766555443
No 284
>PLN00011 cysteine synthase
Probab=28.92 E-value=4.5e+02 Score=23.92 Aligned_cols=59 Identities=10% Similarity=-0.089 Sum_probs=44.1
Q ss_pred CCCC-CeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccc
Q 018211 65 GGCG-ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (359)
Q Consensus 65 v~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (359)
+.+| +.|. ....+-.-....+++..+|..+..+-|...++.....++..++.+++++..
T Consensus 65 ~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 65 ITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 5667 5554 466677777788888999987666656555567778899999999998853
No 285
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=28.89 E-value=4.5e+02 Score=25.54 Aligned_cols=85 Identities=9% Similarity=0.049 Sum_probs=58.7
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH---HHHHHHHHHhCCeeeecCCC
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF---VAGVLGTWFSGCIAVPLALS 101 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~---~~~~lA~~~~G~~~v~l~~~ 101 (359)
-.+|...+...+..... . .++.++|++...+|-.-.+ ....++++..|+..+.. +.
T Consensus 200 V~~s~~~l~~~~~~~~~---~-----------------~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~ 258 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---I-----------------CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PD 258 (536)
T ss_pred EEEehHHHHHHHHHHHH---h-----------------cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CC
Confidence 57888888876665433 2 4778899888777654322 22467788889887765 44
Q ss_pred CCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 102 YPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 102 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
.....+...+++.++.++.........+.
T Consensus 259 ~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 287 (536)
T PRK10946 259 PSATLCFPLIEKHQVNVTALVPPAVSLWL 287 (536)
T ss_pred CCHHHHHHHHHHhCCcEEEeChHHHHHHH
Confidence 46667777889999998888766554443
No 286
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.69 E-value=2.7e+02 Score=27.27 Aligned_cols=79 Identities=13% Similarity=0.081 Sum_probs=55.7
Q ss_pred hhhhhHHHHHHHHHHHhh---ccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+...+ +...+|++...++-+... +..+++++..|+..+..+. +..+.+...
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~---------- 116 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQ---------- 116 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHH----------
Confidence 478888887777666543 677889999988886553 3458899999988887764 445555555
Q ss_pred CCCCcceeeecchHH
Q 018211 265 RAGEAITAFTGVPTM 279 (359)
Q Consensus 265 i~~~~vt~~~~~P~~ 279 (359)
++..+++.+...+..
T Consensus 117 l~~~~~~~ii~~~~~ 131 (563)
T PRK06710 117 LHDSGAKVILCLDLV 131 (563)
T ss_pred HhccCCeEEEEeccc
Confidence 666777777665543
No 287
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.53 E-value=3.6e+02 Score=26.57 Aligned_cols=84 Identities=18% Similarity=0.121 Sum_probs=60.1
Q ss_pred hhhhhhHHHHHHHHHHHh----hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCC
Q 018211 188 VVHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~ 262 (359)
-.+|...+...+..+... .+..++|++...++-+.-. +..+++++..|+..+..+. ...+.+...
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~-------- 106 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEH--LEVLFAVACMGAVFNPLNKQLMNDQIVHI-------- 106 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCCEEeecccccCHHHHHHH--------
Confidence 357888887766665553 4777899999888876543 3457889999999988864 455555555
Q ss_pred CCCCCCcceeeecchHHHHHH
Q 018211 263 GNRAGEAITAFTGVPTMYTRL 283 (359)
Q Consensus 263 ~~i~~~~vt~~~~~P~~~~~l 283 (359)
++..++..++..+.....+
T Consensus 107 --l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 107 --INHAEDEVIVADPRLAEQL 125 (576)
T ss_pred --HhccCCcEEEEChhhHHHH
Confidence 7778888888777655544
No 288
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=28.52 E-value=4.4e+02 Score=23.85 Aligned_cols=69 Identities=12% Similarity=0.202 Sum_probs=42.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCC--CHHH---HHHHHhhCCceEEEeccccHH-HHHHHhhhcCCc
Q 018211 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY--PESE---LLHVMHDSDISMVLSTEDYRE-VLQNVASKSGAK 139 (359)
Q Consensus 69 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~--~~~~---l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~ 139 (359)
.+..+..++...++.-.+++-..|.. -+.+.. ++.+ +...+++.++++||++....+ .+..+.+..+.+
T Consensus 203 ~~~~i~~H~af~Yf~~~ygl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~e~g~~ 277 (311)
T PRK09545 203 GKGYFVFHDAYGYFEKHYGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVIESVAKGTSVR 277 (311)
T ss_pred CCcEEEECchHHHHHHhCCCceeeee--ccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCe
Confidence 45566788888888777777666532 233322 4555 455556788999999875533 444454444443
No 289
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=27.88 E-value=3.8e+02 Score=25.65 Aligned_cols=55 Identities=16% Similarity=0.043 Sum_probs=34.1
Q ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCC-----CCHHHHHHHHhhCCceEEEec
Q 018211 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLST 122 (359)
Q Consensus 64 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 122 (359)
++++||.|.+-.+.. .....++...|+.+++++.. .+.+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 778999887665443 34445666778887766542 356666666643 45656543
No 290
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=27.76 E-value=3e+02 Score=21.51 Aligned_cols=46 Identities=17% Similarity=-0.093 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecch
Q 018211 222 HVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (359)
Q Consensus 222 h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (359)
|..|....-..--..|..++... ...++++.+. +.++++..+.++-
T Consensus 16 H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~----------a~~~~~d~V~lS~ 62 (137)
T PRK02261 16 HAVGNKILDRALTEAGFEVINLGVMTSQEEFIDA----------AIETDADAILVSS 62 (137)
T ss_pred hHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH----------HHHcCCCEEEEcC
Confidence 77776543333346777777776 4567888888 7778888776543
No 291
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=27.63 E-value=1.7e+02 Score=27.65 Aligned_cols=50 Identities=20% Similarity=0.131 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCH-HHH-HHHHHHHHhCCeee
Q 018211 32 LASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFV-AGVLGTWFSGCIAV 96 (359)
Q Consensus 32 l~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~-~~~-~~~lA~~~~G~~~v 96 (359)
...+-+++|+.|.+.| .++++|+.|.|..+-.. +++ ...-.+.++|+-.+
T Consensus 3 ~~~~l~kyA~llV~~g---------------lnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v 54 (398)
T PF02073_consen 3 FDERLEKYAELLVKYG---------------LNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYV 54 (398)
T ss_dssp HHHHHHHHHHHHHHTT---------------T---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCE
T ss_pred chHHHHHHHHHHHHhc---------------cCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCce
Confidence 4567888999998866 58999999999988773 333 34446788898333
No 292
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=27.38 E-value=5.7e+02 Score=25.86 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=66.8
Q ss_pred CCCCCceEEee---------CCccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHH
Q 018211 12 SMARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (359)
Q Consensus 12 ~~~p~~~ai~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~ 82 (359)
...|+..|.+. .+-.+||+-+...+..+...+. -++++|++.-++|-.--+=
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-------------------~~~~~d~~LsfLPlaHi~E 247 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-------------------PIGPGDRVLSFLPLAHIFE 247 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-------------------CCCCCcEEEEeCcHHHHHH
Confidence 45677777763 2478999999999988876662 1678999999998653222
Q ss_pred HHH-HHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 83 AGV-LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 83 ~~~-lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
-++ .++...|.+.+. ...+.+.+..-+...+|.+++.-.+..+.+.
T Consensus 248 r~~~~~~~~~~g~~~~--~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 248 RAFEGGLALYGGVTVL--FKEDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred HHHHHHHHhhcceEEE--ecCCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 222 444444443332 3446677888899999999998776555443
No 293
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=26.68 E-value=2.9e+02 Score=22.16 Aligned_cols=89 Identities=10% Similarity=0.122 Sum_probs=57.2
Q ss_pred hhcCcEEEEcCCCChhHHHHHHHhhcCCCCCCCCC-cceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecC
Q 018211 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGE-AITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (359)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 312 (359)
+-.|.++.+-.+.....+.+. +.+. ++|++.-.......+.+. +..+.++.||
T Consensus 17 I~~~~~Ifld~GtT~~~la~~----------L~~~~~ltVvTnsl~ia~~l~~~----------------~~~~vi~~GG 70 (161)
T PF00455_consen 17 IEDGDTIFLDSGTTTLELAKY----------LPDKKNLTVVTNSLPIANELSEN----------------PNIEVILLGG 70 (161)
T ss_pred CCCCCEEEEECchHHHHHHHH----------hhcCCceEEEECCHHHHHHHHhc----------------CceEEEEeCC
Confidence 445666666666666777777 3343 788887777777777654 3678888888
Q ss_pred CCCCH-------HHHHHHHHHh-CCcccccccCCcCcccccccc
Q 018211 313 SALPL-------PVMQQWETIT-GHRLLERYGMTEGCTKGRHCW 348 (359)
Q Consensus 313 ~~l~~-------~~~~~~~~~~-~~~v~~~YG~TE~g~~~~~~~ 348 (359)
..-+. ...+.+++.. +.-++..-|.++-+|+.....
T Consensus 71 ~~~~~~~~~~G~~a~~~l~~~~~d~afi~~~gi~~~~G~~~~~~ 114 (161)
T PF00455_consen 71 EVNPKSLSFVGPIALEALRQFRFDKAFIGADGISEEGGLTTSDE 114 (161)
T ss_pred EEEcCCCcEECchHHHHHHhhccceEEecccEecCCCccccchH
Confidence 65443 3445554432 667778888887666555443
No 294
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=26.63 E-value=1.2e+02 Score=29.15 Aligned_cols=59 Identities=20% Similarity=0.019 Sum_probs=41.4
Q ss_pred cCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC----CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHH
Q 018211 208 YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP----KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281 (359)
Q Consensus 208 ~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~ 281 (359)
..++|.++.--|-++..-.. + -..|..++-.+ ..+++.+-+. +++.+|..++.+|++-+
T Consensus 176 ~~pGd~v~vE~PtY~~~~~~---~--~~~g~~~~~vp~d~~G~~~e~le~~----------~~~~~~k~~y~~P~~qN 238 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQA---L--EALGARVIPVPVDEDGIDPEALEEA----------LAQWKPKAVYVTPTFQN 238 (459)
T ss_pred CCCCCEEEEcCCCcHHHHHH---H--HHcCCcEEecCCCCCCCCHHHHHHH----------HhhcCCcEEEECCCCCC
Confidence 45899999999988764432 2 34566666554 3577777777 66678889998887643
No 295
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=26.50 E-value=2.4e+02 Score=31.22 Aligned_cols=83 Identities=16% Similarity=0.024 Sum_probs=59.6
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCCChhHHHHHHHhhcCCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i 265 (359)
.+|++.+...+..+... .+..++|++...++-+... +..+++++..|+..+..+...+..-++.+ +
T Consensus 483 ~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~--i~~~la~~~~G~~~vpld~~~p~~~~~~~---------l 551 (1296)
T PRK10252 483 QFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFL--TLALHAIVEAGAAWLPLDTGYPDDRLKMM---------L 551 (1296)
T ss_pred cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEecCccCHHHHHHHH---------H
Confidence 47888888776666554 3788899999988876543 44689999999999988865555544443 6
Q ss_pred CCCcceeeecchHHHHH
Q 018211 266 AGEAITAFTGVPTMYTR 282 (359)
Q Consensus 266 ~~~~vt~~~~~P~~~~~ 282 (359)
+..++..+...+.....
T Consensus 552 ~~~~~~~~i~~~~~~~~ 568 (1296)
T PRK10252 552 EDARPSLLITTADQLPR 568 (1296)
T ss_pred HhCCCCEEEECcchhhh
Confidence 66777777766554443
No 296
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=26.34 E-value=2.9e+02 Score=25.70 Aligned_cols=54 Identities=11% Similarity=0.126 Sum_probs=33.0
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCC-----CCHHHHHHHHhhCCceEEE
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVL 120 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 120 (359)
.++++||.|.+-.+. +.....++...|+.++.++.+ .+.+.+...++. +.+.|+
T Consensus 68 l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 68 LGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred cCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 467889987765432 333344566788877776532 356677766643 456555
No 297
>PRK09192 acyl-CoA synthetase; Validated
Probab=26.28 E-value=4.1e+02 Score=26.22 Aligned_cols=85 Identities=12% Similarity=0.054 Sum_probs=58.3
Q ss_pred hhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CC-------hhHHHHHHH
Q 018211 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FS-------VRGIWQRWR 256 (359)
Q Consensus 188 v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~-------~~~~~~~~~ 256 (359)
-.+|...+...+..+... .++.++|++....+.+-..- ..+++++..|+..+..+. +. .+++...
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~-- 123 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFV--EAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM-- 123 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHH--HHHHHHHHcCCeeEeccCCcccccchHHHHHHHHH--
Confidence 457888887766655544 47889999999998864433 458899999999988852 11 3444444
Q ss_pred hhcCCCCCCCCCcceeeecchHHHHHHH
Q 018211 257 ESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (359)
Q Consensus 257 ~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 284 (359)
+++.++..+.........+.
T Consensus 124 --------i~~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 124 --------LASAQPAAIITPDELLPWVN 143 (579)
T ss_pred --------HHhcCCCEEEeChHHHHHHH
Confidence 66778888777666554433
No 298
>PRK07787 acyl-CoA synthetase; Validated
Probab=26.01 E-value=2.8e+02 Score=26.39 Aligned_cols=75 Identities=17% Similarity=0.132 Sum_probs=52.6
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAG 267 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~ 267 (359)
.+|...+...+..+...+. +.|++....+-+- ..+..+++++..|+..+..+. +..+.+... +++
T Consensus 25 ~~Ty~el~~~~~~~a~~L~--~~~~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~----------l~~ 90 (471)
T PRK07787 25 VLSRSDLAGAATAVAERVA--GARRVAVLATPTL--ATVLAVVGALIAGVPVVPVPPDSGVAERRHI----------LAD 90 (471)
T ss_pred EEEHHHHHHHHHHHHHHhc--cCCEEEEECCCCH--HHHHHHHHHHhcCcEEeecCCCCChHHHHHH----------HHh
Confidence 4788888888877777654 5688877777653 444568999999999998875 444555444 566
Q ss_pred Ccceeeecch
Q 018211 268 EAITAFTGVP 277 (359)
Q Consensus 268 ~~vt~~~~~P 277 (359)
.++..+...+
T Consensus 91 ~~~~~il~~~ 100 (471)
T PRK07787 91 SGAQAWLGPA 100 (471)
T ss_pred cCCCEEEecC
Confidence 6776666543
No 299
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=25.89 E-value=4.8e+02 Score=24.31 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=41.0
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH
Q 018211 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 72 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
.+....+-......+++.+.|..+..+=|...+......++..++.+++++..+.+
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 106 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDYDE 106 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCHHH
Confidence 34445566777778888999986666666666666777899999999998765433
No 300
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.68 E-value=2.8e+02 Score=20.59 Aligned_cols=40 Identities=13% Similarity=0.168 Sum_probs=32.4
Q ss_pred HHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEec
Q 018211 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST 122 (359)
Q Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 122 (359)
.....+...|.-++-+....+.+++...+.+.+|++|..+
T Consensus 18 ~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS 57 (119)
T cd02067 18 IVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLS 57 (119)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEe
Confidence 3444455678888888999999999999999999988765
No 301
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=25.61 E-value=4.2e+02 Score=22.50 Aligned_cols=98 Identities=10% Similarity=-0.005 Sum_probs=0.0
Q ss_pred CCCceEEEecCch-hhHHHHHHHHHhhhcCcEEEEcC-CCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhh
Q 018211 209 TSADQFLHCLPLH-HVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQG 286 (359)
Q Consensus 209 ~~~d~~l~~~pl~-h~~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 286 (359)
..+.+++.+.+-- |..|....-..--..|-.++... +..++++.+. +.+.++.++.++-.+-..+...
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~----------~~~~~~~~V~lS~~~~~~~~~~ 156 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEA----------AKEHKADIIGLSGLLVPSLDEM 156 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHH----------HHHcCCCEEEEccchhccHHHH
Q ss_pred hhhhhHHHHHHHHhhhccceEEEecCCCCCHHHHHH
Q 018211 287 YEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQ 322 (359)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~ 322 (359)
..+-+.-+.....++ +++||.+++++..+.
T Consensus 157 -----~~~i~~L~~~~~~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 157 -----VEVAEEMNRRGIKIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred -----HHHHHHHHhcCCCCe-EEEEChhcCHHHHhh
No 302
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=25.36 E-value=1.1e+02 Score=20.93 Aligned_cols=28 Identities=11% Similarity=0.053 Sum_probs=23.6
Q ss_pred CCccccHHHHHHHHHHHHHHHhhCCCCC
Q 018211 23 DQKSYSYDQLASSALRISSLLCSNDLKT 50 (359)
Q Consensus 23 ~~~~~Ty~el~~~~~~la~~L~~~~~~~ 50 (359)
.++.+|.++|.+.++++.+.+.++|+..
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY~~ 54 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGYIT 54 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-TT
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCceE
Confidence 4789999999999999999999988764
No 303
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=25.34 E-value=3e+02 Score=26.31 Aligned_cols=76 Identities=8% Similarity=-0.017 Sum_probs=51.2
Q ss_pred hhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCCC-ChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (359)
.+|+..+...+..+... .+..+++++....+.+.. ....+++++..|+..+..+.. ..+.+...
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~--~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~---------- 94 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE--MLATFLGAVKAGHAYIPVDVSSPAERIEMI---------- 94 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEecCCCCChHHHHHHH----------
Confidence 47888888776666544 467778999988886544 334688999999999877753 44444444
Q ss_pred CCCCcceeeecc
Q 018211 265 RAGEAITAFTGV 276 (359)
Q Consensus 265 i~~~~vt~~~~~ 276 (359)
++..++..++..
T Consensus 95 ~~~~~~~~~~~~ 106 (503)
T PRK04813 95 IEVAKPSLIIAT 106 (503)
T ss_pred HHhcCCCEEEec
Confidence 445555555543
No 304
>PRK07276 DNA polymerase III subunit delta'; Validated
Probab=25.24 E-value=5e+02 Score=23.32 Aligned_cols=45 Identities=13% Similarity=-0.002 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCC
Q 018211 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSD 115 (359)
Q Consensus 66 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 115 (359)
.+...+.|+.-++++. ++...+..+..+++.+ +.+++..++.+.+
T Consensus 131 Pp~~t~~iL~t~~~~~---lLpTI~SRcq~i~f~~--~~~~~~~~L~~~g 175 (290)
T PRK07276 131 PQSEIYIFLLTNDENK---VLPTIKSRTQIFHFPK--NEAYLIQLLEQKG 175 (290)
T ss_pred CCCCeEEEEEECChhh---CchHHHHcceeeeCCC--cHHHHHHHHHHcC
Confidence 3444666666666553 3567778888888754 5666666666544
No 305
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=24.79 E-value=6.4e+02 Score=24.33 Aligned_cols=58 Identities=9% Similarity=-0.023 Sum_probs=37.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCC-CHHHHHHHHhhCCceEEEecc
Q 018211 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY-PESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 66 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~ 123 (359)
-.|.+|+|+.+....+..+-+..-.+|+.++.+.... +.+++..+++......++.+.
T Consensus 323 L~GkrvaI~~~~~~~~~l~~~l~~ElGmevv~~~~~~~~~~~~~~~~~~~~~~~~~i~d 381 (457)
T TIGR01284 323 LRGKKVWVWSGGPKLWHWPRPLEDELGMEVVAVSTKFGHEDDYEKIIARVREGTVIIDD 381 (457)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEEEEeCCHHHHHHHHHhcCCCeEEEeC
Confidence 3588999998876555555444446999887775543 466777777776655444443
No 306
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=24.53 E-value=3.5e+02 Score=25.01 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=34.6
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCC-----CCCHHHHHHHHhh---CCceEEE
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHD---SDISMVL 120 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi 120 (359)
+++++||.|.+-.+. +....-++...|+.++.++. ..+.+++...+++ -++++++
T Consensus 64 l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 64 LGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred cCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 467889987776554 33334556678887766543 2466777777763 3556665
No 307
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=24.00 E-value=4.4e+02 Score=25.28 Aligned_cols=60 Identities=8% Similarity=-0.090 Sum_probs=43.7
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHHH
Q 018211 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (359)
Q Consensus 71 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (359)
-.+....+-.-+...+++..+|..+..+=|...+......++..++++++++.++.+...
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~ 213 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVE 213 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHH
Confidence 445556667777778888888976666555556666677899999999999877655433
No 308
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=23.96 E-value=3.4e+02 Score=27.09 Aligned_cols=93 Identities=13% Similarity=-0.005 Sum_probs=60.6
Q ss_pred CCCCcEEEEecCCCCCCcchhhhhhhHHHHHHHHHHHh---hccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcC
Q 018211 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (359)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~ 244 (359)
.++.++++... ..| ....+|...+...+..+... .|..++|++...++-+.-. +..+++++..|+..+..+
T Consensus 52 ~p~~~a~~~~~--~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~ 125 (614)
T PRK08180 52 APDRVFLAERG--ADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEH--ALLALAAMYAGVPYAPVS 125 (614)
T ss_pred CCCCceeeecc--CCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCeEeeec
Confidence 44666665421 112 12457889888877766654 4788999999998887543 345889999999999886
Q ss_pred C-CC-----hhHHHHHHHhhcCCCCCCCCCcceeeecc
Q 018211 245 K-FS-----VRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (359)
Q Consensus 245 ~-~~-----~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 276 (359)
. +. .+.+... ++..++..++..
T Consensus 126 ~~~~~~~~~~~~l~~~----------l~~~~~~~li~~ 153 (614)
T PRK08180 126 PAYSLVSQDFGKLRHV----------LELLTPGLVFAD 153 (614)
T ss_pred cccccccCCHHHHHHH----------HhcCCCcEEEEc
Confidence 4 33 3444444 556666666654
No 309
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=23.93 E-value=4.7e+02 Score=23.15 Aligned_cols=72 Identities=17% Similarity=0.318 Sum_probs=42.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHH---HHHHHhhCCceEEEeccccH-HHHHHHhhhcCCce
Q 018211 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESE---LLHVMHDSDISMVLSTEDYR-EVLQNVASKSGAKF 140 (359)
Q Consensus 69 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~~~ 140 (359)
.+..+..++...++.-.+++-..+..-.--...-++.+ +...+++.++++||++.... +.+..+.+..+.++
T Consensus 171 ~~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v 246 (282)
T cd01017 171 GKTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAKL 246 (282)
T ss_pred CCeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCcE
Confidence 34566777788888777766655532111122334544 45556778899999987554 34444444444433
No 310
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=23.92 E-value=4.6e+02 Score=24.85 Aligned_cols=58 Identities=9% Similarity=-0.094 Sum_probs=43.2
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHH
Q 018211 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (359)
Q Consensus 71 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (359)
-.+....+-.-+...+++...|..+..+=|...+.+....++..++++++++.++.+.
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a 193 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKA 193 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHH
Confidence 3455556677788888999999866666565666667778899999999998765444
No 311
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=23.86 E-value=3.2e+02 Score=20.60 Aligned_cols=42 Identities=10% Similarity=0.045 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 82 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
..+...+...|.-++.+.+..+.+++.....+.++++++.+.
T Consensus 17 ~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 17 KVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 344445667788999999999999999999999999988664
No 312
>PRK08638 threonine dehydratase; Validated
Probab=23.83 E-value=5.7e+02 Score=23.42 Aligned_cols=56 Identities=7% Similarity=0.030 Sum_probs=40.4
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHH
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (359)
+....+-.-....+++...|..+..+-|...+......++..++++++++....+.
T Consensus 79 v~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 134 (333)
T PRK08638 79 VACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDT 134 (333)
T ss_pred EEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHH
Confidence 34455667777788889999866666565555666778899999999997654433
No 313
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=23.81 E-value=3e+02 Score=27.40 Aligned_cols=60 Identities=12% Similarity=0.139 Sum_probs=48.5
Q ss_pred ccCCCCCeEEEEcC--CCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 63 LAGGCGARIGIVAK--PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 63 ~gv~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
.|+++.|+|-+.+| .+.-.++.+-+|+..|+++| |..++|....-.-..+.++.++-.-.
T Consensus 278 ~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QYIG 339 (649)
T KOG1179|consen 278 FGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQYIG 339 (649)
T ss_pred hCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeehHH
Confidence 69999999999887 45677888889999999876 68899988877777778877776543
No 314
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=23.52 E-value=6.8e+02 Score=24.24 Aligned_cols=35 Identities=23% Similarity=0.174 Sum_probs=24.6
Q ss_pred CceEEEecCchhhHHHH-HHHHHhhhcCcEEEEcCC
Q 018211 211 ADQFLHCLPLHHVHGLF-NALLAPLYAGATVEFMPK 245 (359)
Q Consensus 211 ~d~~l~~~pl~h~~~~~-~~~~~~l~~G~~i~~~~~ 245 (359)
--+++...|+.+-..+. ..+..+|..|.++++-+.
T Consensus 137 ~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs 172 (480)
T cd07559 137 LGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPA 172 (480)
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECc
Confidence 34667777877655543 235678999999998875
No 315
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=23.22 E-value=2.2e+02 Score=26.89 Aligned_cols=73 Identities=11% Similarity=0.123 Sum_probs=38.1
Q ss_pred CCCCCeEEEEcCCCHHHHHHH----H-----HHHHhCCeeeecCC---CCCHHHHHHHHhhCCceEEEecccc------H
Q 018211 65 GGCGARIGIVAKPSFEFVAGV----L-----GTWFSGCIAVPLAL---SYPESELLHVMHDSDISMVLSTEDY------R 126 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~----l-----A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~------~ 126 (359)
+++||+|..+-...=.++-.- . .......+..++++ ....+++..++++.+|++|+++... .
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~ 186 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDF 186 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---H
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCH
Confidence 467888777655443222111 1 22223345556663 4468889999999999999987632 4
Q ss_pred HHHHHHhhhcC
Q 018211 127 EVLQNVASKSG 137 (359)
Q Consensus 127 ~~~~~~~~~~~ 137 (359)
+.+.++....+
T Consensus 187 ~~~reIad~vg 197 (399)
T PF00464_consen 187 KRFREIADEVG 197 (399)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 55666655544
No 316
>PRK05638 threonine synthase; Validated
Probab=23.02 E-value=4.1e+02 Score=25.45 Aligned_cols=57 Identities=16% Similarity=-0.007 Sum_probs=38.4
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHHH
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (359)
+....+-........+.++|..+..+-|...+......++..+++++.++.++.+..
T Consensus 116 v~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~~~~~~ 172 (442)
T PRK05638 116 IVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGESVDEAI 172 (442)
T ss_pred EEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCCHHHHH
Confidence 335556666666677778887555554444455556688999999999987654443
No 317
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=22.74 E-value=6.3e+02 Score=24.08 Aligned_cols=57 Identities=12% Similarity=0.017 Sum_probs=42.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecc
Q 018211 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (359)
Q Consensus 66 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (359)
.+|+.|.- ...+-.-....++|.+.|..+..+-|...+++....++..++++++++.
T Consensus 60 ~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 60 KPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 56766544 4667777888889999998776666655556677788999999999875
No 318
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=22.43 E-value=4.3e+02 Score=25.69 Aligned_cols=76 Identities=14% Similarity=0.079 Sum_probs=53.4
Q ss_pred hhhhhHHHHHHHHHHH---hhccCCCceEEEecCchhhHHHHHHHHHhhhcCcEEEEcCC-CChhHHHHHHHhhcCCCCC
Q 018211 189 VHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (359)
Q Consensus 189 ~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (359)
.+|...+...+..+.. ..++.++|++...++-+... ...+++++..|+..+..+. .....+...
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 113 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDH--PINFFGALKAGARVVHLSPLDGERALSHK---------- 113 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHhcCeEEEecCCCCCHHHHHHH----------
Confidence 4788888776655554 34788999999988876543 3357888999999987765 445555555
Q ss_pred CCCCcceeeecc
Q 018211 265 RAGEAITAFTGV 276 (359)
Q Consensus 265 i~~~~vt~~~~~ 276 (359)
++..++..++..
T Consensus 114 i~~~~~~~vi~~ 125 (541)
T TIGR03205 114 LSDSGARLLITS 125 (541)
T ss_pred HhhcCceEEEEe
Confidence 666777776654
No 319
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=22.42 E-value=6.5e+02 Score=25.23 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=62.0
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHH----HHHHHHHHHhCC--eeeec
Q 018211 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF----VAGVLGTWFSGC--IAVPL 98 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~----~~~~lA~~~~G~--~~v~l 98 (359)
......++.+.+.+++..+.+ +++|.|+.+-..+- .+...++-++|+ +...+
T Consensus 48 ~P~~l~~m~~a~~ri~~ai~~----------------------~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~I 105 (575)
T PRK11070 48 PWQQLSGIEKAVELLYNALRE----------------------GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLV 105 (575)
T ss_pred ChHHhhCHHHHHHHHHHHHHC----------------------CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEe
Confidence 346678888888888888876 88999999877544 344566777887 22333
Q ss_pred CC------CCCHHHHHHHHhhCCceEEEecccc---HHHHHHHhhhcCCceeccCCC
Q 018211 99 AL------SYPESELLHVMHDSDISMVLSTEDY---REVLQNVASKSGAKFSLIPPV 146 (359)
Q Consensus 99 ~~------~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~~~~~~~~~~~~ 146 (359)
+. .++.+.+..+.+ .+++++|+-.-- .+.+.. ....+..+++.++.
T Consensus 106 P~R~~eGYGl~~~~i~~~~~-~~~~LiItvD~Gi~~~e~i~~-a~~~gidvIVtDHH 160 (575)
T PRK11070 106 PNRFEDGYGLSPEVVDQAHA-RGAQLIVTVDNGISSHAGVAH-AHALGIPVLVTDHH 160 (575)
T ss_pred CCCCcCCCCCCHHHHHHHHh-cCCCEEEEEcCCcCCHHHHHH-HHHCCCCEEEECCC
Confidence 32 567777777654 477888875422 233322 23345666666543
No 320
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=22.41 E-value=5.5e+02 Score=24.35 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=39.0
Q ss_pred cCCCCCeEEEEcCCCH--H--HHHHHH--HHHHhCCee---eecCCCCCHHHHHHHHhhCCceEEEe
Q 018211 64 AGGCGARIGIVAKPSF--E--FVAGVL--GTWFSGCIA---VPLALSYPESELLHVMHDSDISMVLS 121 (359)
Q Consensus 64 gv~~gd~V~i~~~n~~--~--~~~~~l--A~~~~G~~~---v~l~~~~~~~~l~~~l~~~~~~~vi~ 121 (359)
-+++||.|.+..+..+ + ....++ .+.+.|+.+ +-.+..-+.+++..+++..+|+.+|-
T Consensus 315 ~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ip 381 (422)
T TIGR00649 315 RIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIP 381 (422)
T ss_pred EeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEe
Confidence 4458899888874443 3 112223 366788744 34566678899999999999998873
No 321
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=22.39 E-value=7.2e+02 Score=24.08 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHH
Q 018211 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESE 106 (359)
Q Consensus 67 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 106 (359)
.|.+|++..++...+-++-+-.- +|+.++.+......++
T Consensus 313 ~GKrvai~Gdp~~~i~LarfL~e-lGmevV~vgt~~~~~~ 351 (457)
T CHL00073 313 RGKSVFFMGDNLLEISLARFLIR-CGMIVYEIGIPYMDKR 351 (457)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-CCCEEEEEEeCCCChh
Confidence 69999988887777776666555 9998888866554333
No 322
>PRK06721 threonine synthase; Reviewed
Probab=22.35 E-value=5.6e+02 Score=23.62 Aligned_cols=55 Identities=7% Similarity=-0.058 Sum_probs=37.4
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCC-CHHHHHHHHhhCCceEEEeccccHH
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSY-PESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
+....+-.-....+++...|..+..+-|.. .+......++..++++++++..+.+
T Consensus 79 V~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 79 ICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFDD 134 (352)
T ss_pred EEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 334455666777778889998666655543 3444555788999999999875443
No 323
>PRK07048 serine/threonine dehydratase; Validated
Probab=22.21 E-value=5.9e+02 Score=23.02 Aligned_cols=53 Identities=9% Similarity=-0.080 Sum_probs=39.8
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEecccc
Q 018211 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (359)
Q Consensus 73 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (359)
+....+-......+++...|..+..+-|...+++....++..++.+++++...
T Consensus 76 v~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~~ 128 (321)
T PRK07048 76 VTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRYT 128 (321)
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 33445777888888999999866666555555667788999999999998643
No 324
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=21.89 E-value=7.3e+02 Score=23.97 Aligned_cols=47 Identities=13% Similarity=0.079 Sum_probs=32.5
Q ss_pred ccCCCCCeEEEEcCCCHHHHHHHHH-HHHhCCeeeec--C------------CCCCHHHHHHHHhhC
Q 018211 63 LAGGCGARIGIVAKPSFEFVAGVLG-TWFSGCIAVPL--A------------LSYPESELLHVMHDS 114 (359)
Q Consensus 63 ~gv~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l--~------------~~~~~~~l~~~l~~~ 114 (359)
.++++||.| .+..++.+.-+ +...|++++=+ + ...+.+.++..++..
T Consensus 105 l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 105 IAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred hCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 689999976 34566666666 67788866666 2 234788888888754
No 325
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=21.83 E-value=2.4e+02 Score=23.40 Aligned_cols=21 Identities=5% Similarity=0.259 Sum_probs=19.3
Q ss_pred ccccHHHHHHHHHHHHHHHhh
Q 018211 25 KSYSYDQLASSALRISSLLCS 45 (359)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~ 45 (359)
.-+||.|+.+++.++|..+.+
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~ 30 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIAS 30 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999987
No 326
>COG0135 TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
Probab=21.81 E-value=4.8e+02 Score=22.15 Aligned_cols=67 Identities=15% Similarity=0.198 Sum_probs=36.1
Q ss_pred CeEEEEcCC-CHHHHHHHHHHHHhC----CeeeecCCCCCHHHHHHHHhhCCceEEEecc-ccHHHHHHHhhh
Q 018211 69 ARIGIVAKP-SFEFVAGVLGTWFSG----CIAVPLALSYPESELLHVMHDSDISMVLSTE-DYREVLQNVASK 135 (359)
Q Consensus 69 d~V~i~~~n-~~~~~~~~lA~~~~G----~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~-~~~~~~~~~~~~ 135 (359)
|.+++++.. |+..+-..-|.-.+. ...|.+..+.+.+++..+++..++.+|=.+. +..+.+..+...
T Consensus 24 d~iG~If~~~SpR~Vs~~~a~~i~~~v~~~~~VgVf~n~~~~~i~~i~~~~~ld~VQlHG~e~~~~~~~l~~~ 96 (208)
T COG0135 24 DYIGFIFVPKSPRYVSPEQAREIASAVPKVKVVGVFVNESIEEILEIAEELGLDAVQLHGDEDPEYIDQLKEE 96 (208)
T ss_pred CEEEEEEcCCCCCcCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhh
Confidence 445555433 544443333332222 2345666667777777777777777775543 444555555444
No 327
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=21.76 E-value=4.7e+02 Score=24.47 Aligned_cols=59 Identities=10% Similarity=-0.051 Sum_probs=42.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH
Q 018211 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 69 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
..-.+....+-.-....+++...|..++.+-|...+......++..++++++++..+.+
T Consensus 94 ~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 94 QATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 44456666677777788888899986666555555556677788999999999875544
No 328
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=21.33 E-value=2.8e+02 Score=22.43 Aligned_cols=19 Identities=5% Similarity=0.160 Sum_probs=18.1
Q ss_pred ccHHHHHHHHHHHHHHHhh
Q 018211 27 YSYDQLASSALRISSLLCS 45 (359)
Q Consensus 27 ~Ty~el~~~~~~la~~L~~ 45 (359)
+||.|+.+.+.++|..+.+
T Consensus 3 is~~~i~~~i~~lA~~I~~ 21 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITE 21 (166)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999987
No 329
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=21.30 E-value=3.9e+02 Score=23.73 Aligned_cols=55 Identities=22% Similarity=0.231 Sum_probs=32.6
Q ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCC----------CCCHHHHHHHHhh-CCceEEEec
Q 018211 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL----------SYPESELLHVMHD-SDISMVLST 122 (359)
Q Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~vi~~ 122 (359)
+++||.|.+.-+.... ..-++...|+.++.+.+ ..+.+++...+++ .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5678887776543322 23345567877666544 3467778777764 456655543
No 330
>PRK08198 threonine dehydratase; Provisional
Probab=21.26 E-value=4.9e+02 Score=24.48 Aligned_cols=60 Identities=12% Similarity=0.030 Sum_probs=41.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHHH
Q 018211 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (359)
Q Consensus 68 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (359)
++.|.. ...+-......+++...|..+..+=|...+.+....++..++++++++..+.+.
T Consensus 70 ~~~vv~-aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~~~~~ 129 (404)
T PRK08198 70 ARGVVA-ASAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDVYDEA 129 (404)
T ss_pred CCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 334433 344666777778899999876666665566666677899999999997654443
No 331
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=21.20 E-value=5.1e+02 Score=21.96 Aligned_cols=46 Identities=13% Similarity=0.153 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCC
Q 018211 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSD 115 (359)
Q Consensus 68 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 115 (359)
|..|++++. +-....=.--+...|+.+..+.+.. .+++....++.+
T Consensus 12 ~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~-~~el~~~~~~~~ 57 (210)
T COG1648 12 GKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF-EPELKALIEEGK 57 (210)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc-cHHHHHHHHhcC
Confidence 445555554 5555555666778888888888888 666777666665
No 332
>PRK08246 threonine dehydratase; Provisional
Probab=21.05 E-value=6.2e+02 Score=22.82 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=42.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCCCHHHHHHHHhhCCceEEEeccccHH
Q 018211 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 67 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
+++.|. ....+-.-....+++.+.|..+..+-|...++.....++..++++++++..+.+
T Consensus 67 ~~~~vv-~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 126 (310)
T PRK08246 67 PAAGVV-AASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYAD 126 (310)
T ss_pred cCCeEE-EeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHHH
Confidence 355543 344467777778888899976666655555566677899999999999875443
No 333
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=20.60 E-value=7.2e+02 Score=27.83 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=28.0
Q ss_pred CCCceEEEecCchhhHHHH-HHHHHhhhcCcEEEEcCC
Q 018211 209 TSADQFLHCLPLHHVHGLF-NALLAPLYAGATVEFMPK 245 (359)
Q Consensus 209 ~~~d~~l~~~pl~h~~~~~-~~~~~~l~~G~~i~~~~~ 245 (359)
.+--++++..|+.+-..+. ..+..+|..|.++++-+.
T Consensus 767 ~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPs 804 (1318)
T PRK11809 767 RPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPA 804 (1318)
T ss_pred ecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCC
Confidence 3556888999998866554 345578999999998875
No 334
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.44 E-value=3e+02 Score=19.28 Aligned_cols=66 Identities=14% Similarity=0.068 Sum_probs=50.0
Q ss_pred cccHHHHHHHHHHHHH---HHhhCCCCCccccccccccccccCCCCCeEEEEcCCCHHHHHHHHHHHHhCCeeeecCCCC
Q 018211 26 SYSYDQLASSALRISS---LLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY 102 (359)
Q Consensus 26 ~~Ty~el~~~~~~la~---~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 102 (359)
..||+||.+.-+.+++ .|.. ..++..|-|+|+.=++... .-++.++...
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k-----------------~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~ 60 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAK-----------------VDLNDDDELAIFNIEGTSS-----------YYVVFLEEVE 60 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcc-----------------cccCCCCcEEEEEecCcee-----------EEEEEEeccC
Confidence 5789999988887775 3444 5778889999998776532 3567778888
Q ss_pred CHHHHHHHHhhCCceEE
Q 018211 103 PESELLHVMHDSDISMV 119 (359)
Q Consensus 103 ~~~~l~~~l~~~~~~~v 119 (359)
+.++++..+++.++++=
T Consensus 61 s~eev~~ele~mga~in 77 (88)
T COG4009 61 SEEEVERELEDMGAEIN 77 (88)
T ss_pred CHHHHHHHHHHhCchhc
Confidence 99999998888877653
No 335
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=20.37 E-value=1.3e+02 Score=25.66 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=21.5
Q ss_pred HHHHhCCeeeecCCCCCHHHHHHHHhhCC
Q 018211 87 GTWFSGCIAVPLALSYPESELLHVMHDSD 115 (359)
Q Consensus 87 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 115 (359)
++..+|+.+++|++..+.+++..+++..+
T Consensus 32 ~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 32 AIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 56778999999999999999999998764
No 336
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=20.32 E-value=96 Score=29.67 Aligned_cols=38 Identities=11% Similarity=0.182 Sum_probs=32.3
Q ss_pred ccceEEEecCCCCCHHHHHHHHHHhCCcccccccCCcCc
Q 018211 303 KQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEGC 341 (359)
Q Consensus 303 ~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~YG~TE~g 341 (359)
+..|.+++||+--...+.+.+.+.||++|++. +..|.+
T Consensus 442 ~~~rilvtGGAS~N~~Ilq~iadVf~apVy~~-~~~~sa 479 (545)
T KOG2531|consen 442 PPTRILVTGGASRNEAILQIIADVFGAPVYTI-EGPNSA 479 (545)
T ss_pred CCceEEEecCccccHHHHHHHHHHhCCCeEee-cCCchh
Confidence 56899999999999999999999999999887 444443
No 337
>PRK07409 threonine synthase; Validated
Probab=20.13 E-value=6.1e+02 Score=23.33 Aligned_cols=56 Identities=11% Similarity=-0.074 Sum_probs=37.1
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeeeecCCCC-CHHHHHHHHhhCCceEEEeccccHH
Q 018211 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSY-PESELLHVMHDSDISMVLSTEDYRE 127 (359)
Q Consensus 72 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (359)
.+....+-.-....+++...|..+..+-|.. .+.+....++..++++++++..+.+
T Consensus 81 iv~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~~~~ 137 (353)
T PRK07409 81 VICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGNFDD 137 (353)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCCHHH
Confidence 3444555566778888899998655554443 3444455678899999999875433
No 338
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=20.03 E-value=2.4e+02 Score=21.56 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=43.1
Q ss_pred CcEEEEcCCCChhHHHHHHHhhcCCCCCCCCCcceeeecchHHHHHHHhhhhhhhHHHHHHHHhhhccceEEEecCCCCC
Q 018211 237 GATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALP 316 (359)
Q Consensus 237 G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~ 316 (359)
|..+.+.+..+.+++.+. +....+-.....+.+-..+++. +++||+|...|.-++
T Consensus 18 ~~~v~~~~~~~~~~~~~~----------l~~~d~ii~~~~~~~~~~~l~~---------------~~~Lk~I~~~~~G~d 72 (133)
T PF00389_consen 18 GFEVEFCDSPSEEELAER----------LKDADAIIVGSGTPLTAEVLEA---------------APNLKLISTAGAGVD 72 (133)
T ss_dssp TSEEEEESSSSHHHHHHH----------HTTESEEEESTTSTBSHHHHHH---------------HTT-SEEEESSSSCT
T ss_pred CceEEEeCCCCHHHHHHH----------hCCCeEEEEcCCCCcCHHHHhc---------------cceeEEEEEcccccC
Confidence 456666666677777776 4444444443333122222221 367999999998888
Q ss_pred HHHHHHHHHHhCCccccccc
Q 018211 317 LPVMQQWETITGHRLLERYG 336 (359)
Q Consensus 317 ~~~~~~~~~~~~~~v~~~YG 336 (359)
.=..+.+.+. |+.|.+.=|
T Consensus 73 ~id~~~a~~~-gI~V~n~~g 91 (133)
T PF00389_consen 73 NIDLEAAKER-GIPVTNVPG 91 (133)
T ss_dssp TB-HHHHHHT-TSEEEE-TT
T ss_pred cccHHHHhhC-eEEEEEeCC
Confidence 7666677664 888877544
Done!