Query 018217
Match_columns 359
No_of_seqs 264 out of 1706
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 11:46:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 2.9E-35 1E-39 276.9 10.8 177 2-189 95-273 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 7.6E-34 2.6E-38 263.9 -0.1 166 2-178 87-255 (256)
3 2eqx_A Kelch repeat and BTB do 99.9 1.9E-22 6.4E-27 162.5 6.4 96 43-151 4-99 (105)
4 3htm_A Speckle-type POZ protei 99.4 1.9E-14 6.5E-19 124.6 2.2 84 2-92 88-171 (172)
5 3hqi_A Speckle-type POZ protei 99.3 9.2E-13 3.1E-17 125.0 1.6 84 2-92 228-311 (312)
6 4eoz_A Speckle-type POZ protei 99.0 2.7E-11 9.2E-16 101.6 -0.8 66 2-73 79-144 (145)
7 2z8h_A Transcription regulator 98.6 4.8E-09 1.6E-13 87.6 0.2 49 2-52 89-137 (138)
8 3m5b_A Zinc finger and BTB dom 98.5 2.1E-08 7E-13 81.8 1.5 43 2-45 75-117 (119)
9 2yy9_A Zinc finger and BTB dom 98.5 2.2E-08 7.6E-13 83.3 0.5 48 2-51 75-122 (135)
10 3b84_A Zinc finger and BTB dom 98.4 4.2E-08 1.4E-12 79.7 0.3 43 2-45 74-116 (119)
11 2vpk_A Myoneurin; transcriptio 98.4 5.8E-08 2E-12 78.3 0.8 43 2-45 74-116 (116)
12 2q81_A MIZ-1 protein; BTB/POZ 98.4 7E-08 2.4E-12 78.4 0.8 43 2-45 76-118 (119)
13 2vkp_A BTB/POZ domain-containi 98.3 5.3E-08 1.8E-12 77.4 -0.2 43 2-45 65-107 (109)
14 3ga1_A Nucleus accumbens-assoc 98.3 4.3E-08 1.5E-12 80.7 -2.1 43 2-45 84-126 (129)
15 1r29_A B-cell lymphoma 6 prote 98.3 1.3E-07 4.6E-12 77.4 0.9 43 2-45 83-125 (127)
16 1buo_A POZ domain, protein (pr 98.2 1.1E-07 3.8E-12 77.3 -0.3 43 2-45 77-119 (121)
17 2if5_A Zinc finger and BTB dom 98.2 1.7E-07 5.9E-12 75.9 0.8 42 2-44 79-120 (120)
18 2ihc_A Transcription regulator 98.2 6.5E-08 2.2E-12 79.1 -2.6 42 2-44 82-123 (124)
19 3ohu_A Transcription regulator 98.2 7.4E-08 2.5E-12 78.7 -3.2 41 2-43 85-125 (125)
20 3ii7_A Kelch-like protein 7; p 98.0 3.2E-05 1.1E-09 71.6 10.8 54 199-258 4-64 (306)
21 2xn4_A Kelch-like protein 2; s 97.8 0.00023 7.7E-09 65.6 12.6 56 197-258 4-70 (302)
22 2vpj_A Kelch-like protein 12; 97.7 7.7E-05 2.6E-09 68.7 8.5 59 195-259 3-72 (301)
23 2ast_A S-phase kinase-associat 97.7 7E-06 2.4E-10 70.1 0.8 60 2-62 56-143 (159)
24 2zwa_A Leucine carboxyl methyl 97.6 1.4E-05 4.7E-10 83.7 1.7 118 126-259 315-461 (695)
25 4asc_A Kelch repeat and BTB do 97.5 0.0008 2.7E-08 62.4 11.8 39 216-258 116-157 (315)
26 2p1m_A SKP1-like protein 1A; F 97.5 3.2E-05 1.1E-09 66.1 1.6 50 12-63 91-143 (160)
27 1zgk_A Kelch-like ECH-associat 97.3 0.0012 4.2E-08 61.0 10.2 47 208-258 25-79 (308)
28 2vpj_A Kelch-like protein 12; 97.2 0.003 1E-07 57.8 12.0 47 208-258 113-168 (301)
29 4asc_A Kelch repeat and BTB do 97.2 0.0011 3.8E-08 61.5 8.6 37 218-258 68-107 (315)
30 2xn4_A Kelch-like protein 2; s 97.1 0.0016 5.6E-08 59.8 9.1 39 216-258 123-164 (302)
31 2woz_A Kelch repeat and BTB do 97.1 0.003 1E-07 58.6 10.9 38 217-258 127-167 (318)
32 3ii7_A Kelch-like protein 7; p 97.1 0.0018 6.2E-08 59.6 9.1 39 216-258 117-158 (306)
33 1zgk_A Kelch-like ECH-associat 97.0 0.0023 8E-08 59.1 9.3 48 208-259 122-178 (308)
34 2woz_A Kelch repeat and BTB do 97.0 0.0023 8E-08 59.3 9.2 34 219-252 80-116 (318)
35 1fs1_B SKP1, cyclin A/CDK2-ass 96.9 6.7E-05 2.3E-09 62.7 -2.1 45 12-58 87-131 (141)
36 2uvk_A YJHT; unknown function, 96.8 0.004 1.4E-07 58.5 8.8 47 208-258 20-74 (357)
37 3ivv_A Speckle-type POZ protei 96.7 0.0022 7.5E-08 53.2 5.8 113 245-359 28-144 (145)
38 2uvk_A YJHT; unknown function, 96.6 0.01 3.5E-07 55.7 10.4 39 216-258 167-209 (357)
39 2zwa_A Leucine carboxyl methyl 96.2 0.0063 2.1E-07 63.5 7.1 40 216-259 467-510 (695)
40 1k3i_A Galactose oxidase precu 96.2 0.016 5.5E-07 59.6 10.0 44 208-251 254-303 (656)
41 3hqi_A Speckle-type POZ protei 95.6 0.014 4.7E-07 54.5 5.7 112 245-358 24-139 (312)
42 2foj_A Ubiquitin carboxyl-term 94.1 0.13 4.6E-06 42.6 7.3 111 246-358 33-148 (155)
43 1k3i_A Galactose oxidase precu 93.8 0.043 1.5E-06 56.4 4.4 36 216-251 487-527 (656)
44 3drz_A BTB/POZ domain-containi 91.3 0.037 1.3E-06 43.6 -0.1 44 2-45 63-106 (107)
45 3v7d_A Suppressor of kinetocho 89.3 0.27 9.2E-06 41.9 3.7 45 13-58 100-146 (169)
46 2f1z_A Ubiquitin carboxyl-term 83.6 1.9 6.5E-05 42.9 7.0 110 247-358 46-160 (522)
47 4gjh_A TNF receptor-associated 83.4 0.48 1.7E-05 40.4 2.1 28 331-358 146-173 (178)
48 3i3n_A Kelch-like protein 11; 82.1 4.2 0.00014 36.7 8.1 95 14-112 139-251 (279)
49 3drx_A BTB/POZ domain-containi 79.2 0.4 1.4E-05 42.0 0.1 43 3-45 70-112 (202)
50 1ca9_A TRAF2, protein (TNF rec 79.1 0.9 3.1E-05 39.1 2.4 34 322-358 157-190 (192)
51 2eqx_A Kelch repeat and BTB do 77.9 1.4 4.8E-05 34.0 2.9 37 10-48 4-40 (105)
52 1s1g_A Potassium voltage-gated 73.3 0.38 1.3E-05 38.8 -1.6 40 2-41 66-106 (124)
53 1d00_A Tumor necrosis factor r 72.7 1.6 5.6E-05 36.3 2.2 34 322-358 133-166 (168)
54 2vkp_A BTB/POZ domain-containi 68.1 2.8 9.5E-05 31.9 2.5 33 47-83 76-108 (109)
55 1nn7_A Potassium channel KV4.2 65.8 0.48 1.7E-05 37.0 -2.4 39 2-40 53-92 (105)
56 2nz0_B Potassium voltage-gated 61.4 0.52 1.8E-05 38.8 -3.1 39 2-40 88-127 (140)
57 2jmb_A AGR_L_42P, hypothetical 61.1 4.2 0.00014 29.6 2.0 39 305-351 31-70 (79)
58 1lb6_A TNF receptor-associated 60.4 39 0.0013 27.4 8.4 27 333-359 127-157 (160)
59 3hve_A Gigaxonin; ubiquitin, c 60.2 2.9 0.0001 37.2 1.4 31 14-45 131-161 (256)
60 1r29_A B-cell lymphoma 6 prote 54.3 8.7 0.0003 30.0 3.2 33 47-83 94-126 (127)
61 2yy9_A Zinc finger and BTB dom 53.1 5 0.00017 32.0 1.5 38 47-88 86-123 (135)
62 1flk_A TNF receptor associated 50.8 50 0.0017 28.8 7.9 27 332-358 193-223 (228)
63 4ghu_A TNF receptor-associated 50.7 14 0.00048 31.8 4.1 26 333-358 158-187 (198)
64 1t1d_A Protein (potassium chan 50.4 3.9 0.00013 31.5 0.4 39 2-40 55-95 (100)
65 2z8h_A Transcription regulator 49.5 4.8 0.00016 32.2 0.8 35 47-85 100-134 (138)
66 2vpk_A Myoneurin; transcriptio 44.6 13 0.00045 28.4 2.7 31 47-81 85-115 (116)
67 3b84_A Zinc finger and BTB dom 44.3 9.2 0.00032 29.6 1.7 44 36-83 72-117 (119)
68 2q81_A MIZ-1 protein; BTB/POZ 42.2 16 0.00055 28.2 2.9 43 35-81 73-117 (119)
69 3kvt_A Potassium channel prote 41.1 2.1 7.1E-05 33.9 -2.6 34 3-36 60-93 (115)
70 1buo_A POZ domain, protein (pr 39.0 21 0.00071 27.5 3.1 32 47-82 88-119 (121)
71 2if5_A Zinc finger and BTB dom 36.9 26 0.00088 26.8 3.3 30 47-80 90-119 (120)
72 2gkw_A TNF receptor-associated 36.4 71 0.0024 26.9 6.4 26 333-358 158-187 (192)
73 1pd7_B MAD1; PAH2, SIN3, eukar 35.7 10 0.00036 21.5 0.5 14 18-31 3-16 (26)
74 3htm_A Speckle-type POZ protei 27.2 33 0.0011 27.8 2.5 33 47-83 99-131 (172)
75 4eoz_A Speckle-type POZ protei 23.1 26 0.0009 27.5 1.1 34 47-84 90-123 (145)
76 2ast_A S-phase kinase-associat 23.0 2.3E+02 0.0077 22.9 7.0 52 47-112 93-145 (159)
77 3gbw_A E3 ubiquitin-protein li 23.0 39 0.0013 28.3 2.1 38 217-257 6-45 (164)
78 2ysb_A Salvador homolog 1 prot 22.1 51 0.0018 21.6 2.2 29 319-347 1-31 (49)
79 2fnj_C Transcription elongatio 21.0 34 0.0012 25.6 1.3 15 18-32 82-96 (96)
80 3m5b_A Zinc finger and BTB dom 20.2 52 0.0018 25.4 2.2 42 37-82 74-117 (119)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=2.9e-35 Score=276.89 Aligned_cols=177 Identities=20% Similarity=0.399 Sum_probs=169.2
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChhhHHHHHHhccccccccChHHHHHHHHHHHh
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 81 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~ 81 (359)
.+|+|||||++.++. +||.+++.+|++||++.+++.|++||.+ .++++||++++.+|+.| ++.+|.+.|.+||.
T Consensus 95 ~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~ 168 (279)
T 3i3n_A 95 AVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY----TLSQLALKAADMIR 168 (279)
T ss_dssp HHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHH
T ss_pred HHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc----CcHHHHHHHHHHHH
Confidence 478999999999998 9999999999999999999999999999 89999999999999966 99999999999999
Q ss_pred cchhhhhcccccccccCHHHHHHHhcCCCcccCChHHHHHHHHHhhhhcCCChHHHHHHHhHhhhccccCCCCCHHHHHh
Q 018217 82 SRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKK 161 (359)
Q Consensus 82 ~nf~~v~~~~~eFl~L~~~~l~~lL~sd~L~V~sE~~Vf~avl~Wv~~d~~~~~~R~~~l~~~LL~~VRf~ll~~~~L~~ 161 (359)
+||.++.+ +++|++||.+.+..||++|+|+|.+|++||+|+++|++|+ +++|.+++ ++||++||||+|++++|.+
T Consensus 169 ~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ll~~VRf~l~~~~~L~~ 243 (279)
T 3i3n_A 169 RNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLSQMKPTYLTR 243 (279)
T ss_dssp HTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HHHHTTSCGGGSCHHHHHH
T ss_pred HHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhcCCCCCCHHHHHH
Confidence 99999999 9999999999999999999999999999999999999999 89999999 8999999999999999999
Q ss_pred hhccCCCCc--hhHHHHHHHHHHhhhcCcc
Q 018217 162 VLTCNDFDH--DVASKLVLEALFFKAEAPH 189 (359)
Q Consensus 162 ~~~~~~l~~--~~c~~li~ea~~~~~~~~~ 189 (359)
.+++++++. +.|++++.+|++||..|.+
T Consensus 244 ~v~~~~l~~~~~~c~~~l~ea~~~~~~~~e 273 (279)
T 3i3n_A 244 HVKPERLVANNEVCVKLVADAVERHALRAE 273 (279)
T ss_dssp TTTTSHHHHTCHHHHHHHHHHHHHHHHTTC
T ss_pred HhhccchhcCCHHHHHHHHHHHHhccCchh
Confidence 999888874 6899999999999998643
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=7.6e-34 Score=263.87 Aligned_cols=166 Identities=17% Similarity=0.370 Sum_probs=143.2
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChhhHHHHHHhccccccccChHHHHHHHHHHHh
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 81 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~ 81 (359)
.+|+|||||++.++. +|+.+++.+|++||++.+++.|++||.+ .++++||++++.+|+.| ++.+|.+.|.+||.
T Consensus 87 ~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~ 160 (256)
T 3hve_A 87 EILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRDFALHY----CLHHVHYLATEYLE 160 (256)
T ss_dssp HHHHHHHHSCCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHHHHHHT----TCHHHHHHHHHHHH
T ss_pred HHHhhccCCCCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHHHHHHc----CcHHHHHHHHHHHH
Confidence 478999999999998 9999999999999999999999999999 89999999999999966 99999999999999
Q ss_pred cchhhhhcccccccccCHHHHHHHhcCCCcccCChHHHHHHHHHhhhhcCCChHHHHHHHhHhhhccccCCCCCHHHHHh
Q 018217 82 SRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKK 161 (359)
Q Consensus 82 ~nf~~v~~~~~eFl~L~~~~l~~lL~sd~L~V~sE~~Vf~avl~Wv~~d~~~~~~R~~~l~~~LL~~VRf~ll~~~~L~~ 161 (359)
+||.++.+ +++|++||.+.+..||++|+|+|.+|++||+|+++|++|+ +++|.+++ ++||++||||+|++++|.+
T Consensus 161 ~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---~~~R~~~~-~~ll~~VRf~~l~~~~l~~ 235 (256)
T 3hve_A 161 THFRDVSS-TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---TEIRKVHM-KDVMSALWVSGLDSSYLRE 235 (256)
T ss_dssp HHHHHHTT-CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----CCSTTTH-HHHHHHHHHHTTCC-CHHH
T ss_pred HHHHHHhC-CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhCCCCCCCHHHHHH
Confidence 99999999 9999999999999999999999999999999999999999 88899999 8999999999999999999
Q ss_pred hhccCCCCc---hhHHHHHH
Q 018217 162 VLTCNDFDH---DVASKLVL 178 (359)
Q Consensus 162 ~~~~~~l~~---~~c~~li~ 178 (359)
.++++|++. ++|++++.
T Consensus 236 ~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 236 QMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp HHHTSTTHHHHHCC------
T ss_pred HHhcChHHHhhHHHHHHHhh
Confidence 999999984 25888765
No 3
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.9e-22 Score=162.54 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=91.5
Q ss_pred ccCCCCChhhHHHHHHhccccccccChHHHHHHHHHHHhcchhhhhcccccccccCHHHHHHHhcCCCcccCChHHHHHH
Q 018217 43 LRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDF 122 (359)
Q Consensus 43 L~~~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~nf~~v~~~~~eFl~L~~~~l~~lL~sd~L~V~sE~~Vf~a 122 (359)
+.+ +|+++||++++.+|+.| +|++|.++|.+||.+||.+|.+ +++|++||.++|..||++| |.+|++||+|
T Consensus 4 ~~~-~L~~~NCl~i~~~A~~~----~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~a 74 (105)
T 2eqx_A 4 GSS-GVQVGNCLQVMWLADRH----SDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEA 74 (105)
T ss_dssp CCC-CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHH
T ss_pred hhc-cCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHH
Confidence 456 79999999999999966 9999999999999999999999 9999999999999999997 7899999999
Q ss_pred HHHhhhhcCCChHHHHHHHhHhhhccccC
Q 018217 123 VLKWARAQYPRVEERREVLGSRLARFIRF 151 (359)
Q Consensus 123 vl~Wv~~d~~~~~~R~~~l~~~LL~~VRf 151 (359)
|++|++|| +++|.+++ ++||++||+
T Consensus 75 v~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 75 IEAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 99999999 89999999 999999995
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.44 E-value=1.9e-14 Score=124.61 Aligned_cols=84 Identities=21% Similarity=0.315 Sum_probs=74.1
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChhhHHHHHHhccccccccChHHHHHHHHHHHh
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 81 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~ 81 (359)
.+|+|||||++.++. +++.+++.+|++|+++.+++.|++||.+ .++++||+.++.+|..| ++++|.+.|.+||.
T Consensus 88 ~~l~~~Yt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~A~~~----~~~~L~~~~~~~i~ 161 (172)
T 3htm_A 88 EMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFIN 161 (172)
T ss_dssp HHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHH
Confidence 478999999999987 9999999999999999999999999999 89999999999999976 99999999999999
Q ss_pred cchhhhhcccc
Q 018217 82 SRYKDMTKFQD 92 (359)
Q Consensus 82 ~nf~~v~~~~~ 92 (359)
+||.++.+ ++
T Consensus 162 ~~~~~v~~-s~ 171 (172)
T 3htm_A 162 YHATDVLE-TS 171 (172)
T ss_dssp HTC--------
T ss_pred HHHHHHHc-CC
Confidence 99999987 54
No 5
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.25 E-value=9.2e-13 Score=125.02 Aligned_cols=84 Identities=21% Similarity=0.315 Sum_probs=74.0
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChhhHHHHHHhccccccccChHHHHHHHHHHHh
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 81 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~ 81 (359)
.+|+|||||++.++. +++.++|.+|++|+++.|++.|++||.+ .++++||+.++.+|+.| ++.+|.++|.+||.
T Consensus 228 ~~L~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~----~~~~L~~~~~~~i~ 301 (312)
T 3hqi_A 228 EMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFIN 301 (312)
T ss_dssp HHHHHHHHSCCTTHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCChH-HHHHHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHh----CCHHHHHHHHHHHH
Confidence 478999999999987 9999999999999999999999999999 89999999999999976 99999999999999
Q ss_pred cchhhhhcccc
Q 018217 82 SRYKDMTKFQD 92 (359)
Q Consensus 82 ~nf~~v~~~~~ 92 (359)
.||.+|.+ ++
T Consensus 302 ~~~~~v~~-s~ 311 (312)
T 3hqi_A 302 YHATDVLE-TS 311 (312)
T ss_dssp HTC--------
T ss_pred HHHHHHhh-CC
Confidence 99999987 65
No 6
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.00 E-value=2.7e-11 Score=101.64 Aligned_cols=66 Identities=24% Similarity=0.340 Sum_probs=38.4
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChhhHHHHHHhccccccccChHHHH
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLT 73 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~Ncl~i~~~A~~~~~~~~~~~L~ 73 (359)
.+|+|+|||++.++. +++.+++.+|++|+++.+++.|++||.+ .++++||+.++.+|+.| ++.+|+
T Consensus 79 ~~l~~~Y~~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A~~~----~~~~Lk 144 (145)
T 4eoz_A 79 EMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLK 144 (145)
T ss_dssp HHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHCC-------------------------------
T ss_pred HHHHhhccCccCCcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CHHHhc
Confidence 478999999999987 9999999999999999999999999999 89999999999999976 777665
No 7
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.61 E-value=4.8e-09 Score=87.59 Aligned_cols=49 Identities=16% Similarity=0.285 Sum_probs=46.6
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChhh
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPES 52 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~N 52 (359)
.+|+|||||++.++. +||.+++.+|++||++.|++.|++||.+ +++.+|
T Consensus 89 ~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sn 137 (138)
T 2z8h_A 89 PLIQFAYTAKLILSK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDST 137 (138)
T ss_dssp HHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCC
T ss_pred HHHHHhcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hccccc
Confidence 478999999999998 9999999999999999999999999999 899887
No 8
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=98.52 E-value=2.1e-08 Score=81.83 Aligned_cols=43 Identities=28% Similarity=0.369 Sum_probs=39.5
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|||||++.++. +||++++.+|++||++.|++.|++++.+
T Consensus 75 ~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 75 QLLNFVYGESVELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHTTCCEEECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 478999999999998 9999999999999999999999999876
No 9
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.47 E-value=2.2e-08 Score=83.30 Aligned_cols=48 Identities=25% Similarity=0.429 Sum_probs=40.6
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChh
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPE 51 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~ 51 (359)
.+|+|||||++.++. +||.+++.+|++||++.|++.|++||.+ ++...
T Consensus 75 ~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~~ 122 (135)
T 2yy9_A 75 LLLDFFYTGHLALTS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVGQ 122 (135)
T ss_dssp HHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred HHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccCC
Confidence 479999999999998 9999999999999999999999999999 66543
No 10
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.39 E-value=4.2e-08 Score=79.67 Aligned_cols=43 Identities=28% Similarity=0.478 Sum_probs=39.5
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|||||++.++. +|+.+++.+|++|+++.|++.|++||.+
T Consensus 74 ~ll~~iYtg~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 74 LLLDFFYTGHLALTS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred HHHHHHcCCCCccCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 478999999999998 9999999999999999999999999987
No 11
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.37 E-value=5.8e-08 Score=78.29 Aligned_cols=43 Identities=26% Similarity=0.464 Sum_probs=40.1
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|||||++.++. +|+.+++.+|++||++.|++.|++||.+
T Consensus 74 ~ll~~~Yt~~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 74 KLLEFIYTGTLNLDS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp HHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHHcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 478999999999998 9999999999999999999999999864
No 12
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.35 E-value=7e-08 Score=78.36 Aligned_cols=43 Identities=28% Similarity=0.444 Sum_probs=40.4
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|||||++.++. +|+.+++.+|++||++.|++.|++||.-
T Consensus 76 ~ll~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~l 118 (119)
T 2q81_A 76 QVLEFMYTAKLSLSP-ENVDDVLAVATFLQMQDIITACHALKSL 118 (119)
T ss_dssp HHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 478999999999998 9999999999999999999999999863
No 13
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.34 E-value=5.3e-08 Score=77.45 Aligned_cols=43 Identities=33% Similarity=0.565 Sum_probs=41.0
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|+|||++.++. +|+.+++.+|++|+++.|++.|++||.+
T Consensus 65 ~~l~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 65 ILLKYMYSDEIDLEA-DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp HHHHHHHHCCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 478999999999998 9999999999999999999999999986
No 14
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.28 E-value=4.3e-08 Score=80.70 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=34.6
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|||||++.++. +|+.+++.+|++||++.|++.|++||.+
T Consensus 84 ~ll~~iYtg~~~i~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 84 QILSFCYTGRLSMNV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HHHHHHHHSEEECCT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred HHHHHHhCCccccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 478999999999998 9999999999999999999999999987
No 15
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.28 E-value=1.3e-07 Score=77.37 Aligned_cols=43 Identities=21% Similarity=0.502 Sum_probs=40.9
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|||||++.++. +|+.+++.+|++|+++.|++.|++||.+
T Consensus 83 ~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 83 ILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 478999999999998 9999999999999999999999999986
No 16
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.25 E-value=1.1e-07 Score=77.32 Aligned_cols=43 Identities=30% Similarity=0.538 Sum_probs=40.8
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.+|+|+|||++.++. +|+.+++.+|++|+++.+++.|++||.+
T Consensus 77 ~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 77 QILEYAYTATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHHHHHHSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCcCCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 478999999999997 9999999999999999999999999976
No 17
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.25 E-value=1.7e-07 Score=75.88 Aligned_cols=42 Identities=31% Similarity=0.578 Sum_probs=39.7
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHcc
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 44 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~ 44 (359)
.+|+|||||++.++. +|+.+++.+|++|+++.|++.|++||.
T Consensus 79 ~ll~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 79 ALMDFAYTATLTVST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHHHHHHSCCCCCG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 478999999999997 999999999999999999999999984
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.21 E-value=6.5e-08 Score=79.13 Aligned_cols=42 Identities=19% Similarity=0.355 Sum_probs=39.3
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHcc
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 44 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~ 44 (359)
.+|+|||||++.++. +||.+++.+|++||++.|++.|++||+
T Consensus 82 ~lL~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 82 PLIQFAYTAKLILSK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHSEEEEET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHhcCCCcccCH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 478999999999998 999999999999999999999999985
No 19
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.16 E-value=7.4e-08 Score=78.72 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=39.0
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHc
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLL 43 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL 43 (359)
.+|+|||||++.++. +|+.+++.+|++||++.|++.|++||
T Consensus 85 ~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 85 PLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHhHcCCceEECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 478999999999998 99999999999999999999999986
No 20
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.99 E-value=3.2e-05 Score=71.59 Aligned_cols=54 Identities=20% Similarity=0.204 Sum_probs=40.7
Q ss_pred cccCCCcce-eEEEEecC---CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 199 SVTLNRRFV-ERAYKYRP---VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 199 ~~p~~R~~~-~~i~v~~~---~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
++| |+.. +.||+.++ .+.+..|||.+++|.. ||.+|.+|+++++++.||+ +||.
T Consensus 4 ~~p--r~~~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv----~GG~ 64 (306)
T 3ii7_A 4 TRP--RRKKHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYI----LGGS 64 (306)
T ss_dssp --------CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEE----ECCB
T ss_pred ccC--CccccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEE----EeCC
Confidence 445 5544 67776332 6789999999999999 8889999999999999998 7774
No 21
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.78 E-value=0.00023 Score=65.63 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=39.7
Q ss_pred cccccCCCcce---eEEEEecC-----CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 197 EESVTLNRRFV---ERAYKYRP-----VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 197 ~~~~p~~R~~~---~~i~v~~~-----~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
++++| |... +.||+.++ .+.+++|||.+++|.. ||.+|.+|+++++++.||+ +||.
T Consensus 4 ~~~~~--r~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv----~GG~ 70 (302)
T 2xn4_A 4 VRTRL--RTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFA----VGGF 70 (302)
T ss_dssp -------------CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE----ESCB
T ss_pred CcccC--CcccCCCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEE----EeCc
Confidence 44556 6542 56777333 4689999999999998 8899999999999999999 6663
No 22
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.73 E-value=7.7e-05 Score=68.71 Aligned_cols=59 Identities=22% Similarity=0.254 Sum_probs=40.7
Q ss_pred cccccccCCCcce-eEEEEecC-------CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCcc
Q 018217 195 AAEESVTLNRRFV-ERAYKYRP-------VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG 259 (359)
Q Consensus 195 ~~~~~~p~~R~~~-~~i~v~~~-------~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~~ 259 (359)
+.++++| |... +.||+.++ .+.+..|||.+++|.. +|.+|.+|++++.++.||+ +||..
T Consensus 3 ~~~~~~p--r~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v----~GG~~ 72 (301)
T 2vpj_A 3 QGPRTRA--RLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYV----IGGYD 72 (301)
T ss_dssp ------------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE----ECCBC
T ss_pred CCccccc--cccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEE----EcCCC
Confidence 3455677 7543 56777333 4689999999999999 7889999999999999998 77753
No 23
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=97.69 E-value=7e-06 Score=70.14 Aligned_cols=60 Identities=15% Similarity=0.339 Sum_probs=49.1
Q ss_pred ceeeeEeeCe--------------------------EeeCCcchHHHHHHHhhccChhhHHHHHHHHccCC--CCChhhH
Q 018217 2 ELLNFMYSNT--------------------------LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNM--PMTPESA 53 (359)
Q Consensus 2 ~lL~y~YTg~--------------------------i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~--~l~~~Nc 53 (359)
.||+|+|+++ +.++. +++++|+.||++|+|..|+++||+|+.++ +.+++.+
T Consensus 56 kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eei 134 (159)
T 2ast_A 56 KVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEI 134 (159)
T ss_dssp HHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 3788999988 78887 99999999999999999999999999551 4566666
Q ss_pred HHHHHhccc
Q 018217 54 LLYLELPSS 62 (359)
Q Consensus 54 l~i~~~A~~ 62 (359)
-.++.++..
T Consensus 135 r~~f~I~~d 143 (159)
T 2ast_A 135 RKTFNIKND 143 (159)
T ss_dssp HHHTTCCCC
T ss_pred HHHcCCCCC
Confidence 666666554
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.61 E-value=1.4e-05 Score=83.67 Aligned_cols=118 Identities=9% Similarity=0.012 Sum_probs=76.4
Q ss_pred hhhhcCCChHHHHHHHhHhhhccccCCCCCHHHHHhhhccCCCCc--h---hHHHHHHHHHHhhhcCcccc--ccccccc
Q 018217 126 WARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDH--D---VASKLVLEALFFKAEAPHRQ--RTLAAEE 198 (359)
Q Consensus 126 Wv~~d~~~~~~R~~~l~~~LL~~VRf~ll~~~~L~~~~~~~~l~~--~---~c~~li~ea~~~~~~~~~~~--~~l~~~~ 198 (359)
|+.++ ...|.+.+ +.|++.++|++|.+.|+......++... + .|.++... .|+... .....+.
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 384 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEI------NLTVDEDYQLLECEC 384 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----C------CCEECSSEEEEECCC
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccc------cCCCCCceeEeccCC
Confidence 99888 67788899 8999999999998888877666655442 2 23222210 000000 0111122
Q ss_pred cccCCCcce------eEEEEecC-----CCeEEEeeCCCCceEe---------ccCCCcceEEEee--CCcEEEeeeeeC
Q 018217 199 SVTLNRRFV------ERAYKYRP-----VKVVEFERPRQQCVVY---------LDLKREECENLFP--SGRVYSQAFHLG 256 (359)
Q Consensus 199 ~~p~~R~~~------~~i~v~~~-----~~~v~~ydp~~~~W~~---------m~~~R~~~~v~v~--~g~iY~~~f~~g 256 (359)
..+ |+.. +.||+.|+ .+.+.+|||.+++|.. ||.+|.+|+++++ +|.||+ +|
T Consensus 385 ~p~--rr~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv----~G 458 (695)
T 2zwa_A 385 PIN--RKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLL----IG 458 (695)
T ss_dssp TTC--CBSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEE----EC
T ss_pred CCC--CceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEE----Ec
Confidence 222 3332 45666333 4689999999999997 3467999999999 999999 77
Q ss_pred Ccc
Q 018217 257 GQG 259 (359)
Q Consensus 257 G~~ 259 (359)
|..
T Consensus 459 G~~ 461 (695)
T 2zwa_A 459 GRK 461 (695)
T ss_dssp CBS
T ss_pred CCC
Confidence 753
No 25
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.48 E-value=0.0008 Score=62.43 Aligned_cols=39 Identities=18% Similarity=-0.008 Sum_probs=35.1
Q ss_pred CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 216 VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 216 ~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
.+.++.|||.+++|.. ||.+|.+|++++++++||+ +||.
T Consensus 116 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv----~GG~ 157 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYV----IGGK 157 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE----ECCB
T ss_pred cceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEE----EeCC
Confidence 3689999999999999 8889999999999999999 6664
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=97.45 E-value=3.2e-05 Score=66.09 Aligned_cols=50 Identities=12% Similarity=0.329 Sum_probs=35.4
Q ss_pred EeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCC---ChhhHHHHHHhcccc
Q 018217 12 LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM---TPESALLYLELPSSV 63 (359)
Q Consensus 12 i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l---~~~Ncl~i~~~A~~~ 63 (359)
+.++. +++.+|+.||++|+|..|+++||+++.. .| +++++-.++..+..+
T Consensus 91 l~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f~I~nd~ 143 (160)
T 2p1m_A 91 MKIDQ-ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTFNIKNDF 143 (160)
T ss_dssp -----------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHTTCCCCC
T ss_pred HcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcCCCCCC
Confidence 56877 8999999999999999999999999998 57 888888888776543
No 27
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.26 E-value=0.0012 Score=61.03 Aligned_cols=47 Identities=19% Similarity=0.327 Sum_probs=39.9
Q ss_pred eEEEEec-----CCCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 208 ERAYKYR-----PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 208 ~~i~v~~-----~~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
+.||+.+ ..+.+..|||.+++|.. ||.+|.+++++++++.||+ +||.
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv----~GG~ 79 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYA----VGGR 79 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE----ECCE
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEE----ECCC
Confidence 5677733 35789999999999998 7889999999999999999 6664
No 28
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.19 E-value=0.003 Score=57.81 Aligned_cols=47 Identities=23% Similarity=0.287 Sum_probs=39.5
Q ss_pred eEEEEecC------CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 208 ERAYKYRP------VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 208 ~~i~v~~~------~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
+.||+.++ .+.++.|||.+++|.. ||.+|..++++++++.||+ +||.
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv----~GG~ 168 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYC----LGGY 168 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEE----ECCB
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEE----ECCC
Confidence 45666332 5689999999999998 8899999999999999999 6664
No 29
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.16 E-value=0.0011 Score=61.49 Aligned_cols=37 Identities=14% Similarity=-0.080 Sum_probs=33.4
Q ss_pred eEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 218 VVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 218 ~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
.+..|||.+++|.. ||.+|.+|+++++++.||+ +||.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv----~GG~ 107 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYV----VGGR 107 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEE----ECCE
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEECCEEEE----EeCC
Confidence 48999999999998 8889999999999999999 6663
No 30
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.09 E-value=0.0016 Score=59.77 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=35.4
Q ss_pred CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 216 VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 216 ~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
.+.++.|||.+++|.. ||.+|..+++++++++||+ +||.
T Consensus 123 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv----~GG~ 164 (302)
T 2xn4_A 123 LSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYA----VGGY 164 (302)
T ss_dssp EEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE----ECCE
T ss_pred CceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEE----EeCC
Confidence 3589999999999999 8889999999999999999 7775
No 31
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.09 E-value=0.003 Score=58.59 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=34.4
Q ss_pred CeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 217 KVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 217 ~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
+.+++|||.+++|.. ||.+|.+|++++.+|.||+ +||.
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv----~GG~ 167 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYC----LGGK 167 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEE----ECCE
T ss_pred ceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEE----EcCC
Confidence 579999999999998 8889999999999999999 6664
No 32
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.06 E-value=0.0018 Score=59.56 Aligned_cols=39 Identities=18% Similarity=0.202 Sum_probs=35.4
Q ss_pred CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 216 VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 216 ~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
.+.++.|||.+++|.. ||.+|..|++++++++||+ +||.
T Consensus 117 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv----~GG~ 158 (306)
T 3ii7_A 117 LYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYV----CGGS 158 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE----ECCE
T ss_pred eeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEE----ECCC
Confidence 4689999999999999 8889999999999999999 7775
No 33
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.01 E-value=0.0023 Score=59.09 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=40.3
Q ss_pred eEEEEecC------CCeEEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEeeeeeCCcc
Q 018217 208 ERAYKYRP------VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG 259 (359)
Q Consensus 208 ~~i~v~~~------~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~f~~gG~~ 259 (359)
+.||+.++ .+.++.|||.+++|.. ||.+|..++++++++.||+ +||..
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv----~GG~~ 178 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYA----VGGFD 178 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE----ECCBC
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEE----EeCCC
Confidence 45776332 5689999999999999 7889999999999999999 77753
No 34
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.99 E-value=0.0023 Score=59.31 Aligned_cols=34 Identities=15% Similarity=-0.184 Sum_probs=31.5
Q ss_pred EEEeeCCCCceEe---ccCCCcceEEEeeCCcEEEee
Q 018217 219 VEFERPRQQCVVY---LDLKREECENLFPSGRVYSQA 252 (359)
Q Consensus 219 v~~ydp~~~~W~~---m~~~R~~~~v~v~~g~iY~~~ 252 (359)
+..|||.+++|.. ||.+|..|++++++++||+.|
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 116 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVA 116 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEc
Confidence 8899999999999 888999999999999999944
No 35
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=96.89 E-value=6.7e-05 Score=62.73 Aligned_cols=45 Identities=11% Similarity=0.238 Sum_probs=37.3
Q ss_pred EeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCCChhhHHHHHH
Q 018217 12 LSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLE 58 (359)
Q Consensus 12 i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l~~~Ncl~i~~ 58 (359)
+.++. +++.+|+.||++|+|..|++.||+++.+ .|...+.-+|+.
T Consensus 87 ~~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeiR~ 131 (141)
T 1fs1_B 87 LKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTPEEIRK 131 (141)
T ss_dssp TCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCHHHHHH
T ss_pred HhCCH-HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCHHHHHH
Confidence 66776 9999999999999999999999999988 565555555543
No 36
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.76 E-value=0.004 Score=58.53 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=38.7
Q ss_pred eEEEEecC--CCeEEEeeCC--CCceEe---cc-CCCcceEEEeeCCcEEEeeeeeCCc
Q 018217 208 ERAYKYRP--VKVVEFERPR--QQCVVY---LD-LKREECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 208 ~~i~v~~~--~~~v~~ydp~--~~~W~~---m~-~~R~~~~v~v~~g~iY~~~f~~gG~ 258 (359)
+.||+.++ .+.+..||+. +++|.. || .+|.+|++++++|+||+ +||.
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv----~GG~ 74 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYV----FGGI 74 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEE----ECCE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEE----EcCC
Confidence 46777333 4589999998 499998 78 79999999999999999 7776
No 37
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=96.70 E-value=0.0022 Score=53.24 Aligned_cols=113 Identities=17% Similarity=0.261 Sum_probs=71.6
Q ss_pred CCcEEEeeeeeCCc---ccccccccccCCCCCceeeeeEEeeeccCceeeEEEeeeeeccCccccccc-ccceeEEeeCC
Q 018217 245 SGRVYSQAFHLGGQ---GFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVS-KYKGNYTFTGG 320 (359)
Q Consensus 245 ~g~iY~~~f~~gG~---~~~l~~~c~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 320 (359)
+..+|+..|.+||. ...+....+-+.........++|-+.....-++.+.|.+..-.+....... .....|.|..+
T Consensus 28 g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~w~v~a~f~l~llnq~~~~~~~~~~~~~~~F~~~ 107 (145)
T 3ivv_A 28 GEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQG 107 (145)
T ss_dssp TCCEECCCEEESGGGCEEEEEEEETTCSSGGGTTEEEEEEEEEECSSSEEEEEEEEEEECTTSCEEEEEECSSCEEEETT
T ss_pred CCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCCeEEEEEEEcCCCCCcEEEEEEEEEEecCCCceeeecccceEEecCC
Confidence 56788889999995 333433221111112245677776644333346666666544432222221 22357888877
Q ss_pred cccccccCCCCCCceeeeCCCceeecceEEEEeeeeeeC
Q 018217 321 KAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH 359 (359)
Q Consensus 321 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (359)
.++|+..+ ++|..+.+..+.|-.||.|-++++++|+.
T Consensus 108 ~~wG~~~F--i~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 108 KDWGFKKF--IRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp CEEEEEEE--EEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred CCcCHHHe--EEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 78888766 78888877778899999999999999974
No 38
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.60 E-value=0.01 Score=55.70 Aligned_cols=39 Identities=13% Similarity=0.093 Sum_probs=33.6
Q ss_pred CCeEEEeeCCCCceEe---ccCCCc-ceEEEeeCCcEEEeeeeeCCc
Q 018217 216 VKVVEFERPRQQCVVY---LDLKRE-ECENLFPSGRVYSQAFHLGGQ 258 (359)
Q Consensus 216 ~~~v~~ydp~~~~W~~---m~~~R~-~~~v~v~~g~iY~~~f~~gG~ 258 (359)
.+.++.|||.+++|.. ||.+|. +++++++++.||+ +||.
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv----~GG~ 209 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWL----INGE 209 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEE----ECCE
T ss_pred cccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEE----Eeee
Confidence 4789999999999998 776554 5999999999999 7775
No 39
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.23 E-value=0.0063 Score=63.48 Aligned_cols=40 Identities=18% Similarity=0.034 Sum_probs=35.9
Q ss_pred CCeEEEeeCCCCceEe---ccCCCcceEEEee-CCcEEEeeeeeCCcc
Q 018217 216 VKVVEFERPRQQCVVY---LDLKREECENLFP-SGRVYSQAFHLGGQG 259 (359)
Q Consensus 216 ~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~-~g~iY~~~f~~gG~~ 259 (359)
++.++.||+.+++|.. ||.+|.+|+++++ +|+||+ +||..
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv----~GG~~ 510 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLI----LGGVT 510 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEE----ECCBC
T ss_pred cccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEE----ECCCC
Confidence 5689999999999999 8899999999997 999999 77753
No 40
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.21 E-value=0.016 Score=59.62 Aligned_cols=44 Identities=11% Similarity=0.088 Sum_probs=37.0
Q ss_pred eEEEEecC--CCeEEEeeCCCCceEe---ccCCCcceEEEee-CCcEEEe
Q 018217 208 ERAYKYRP--VKVVEFERPRQQCVVY---LDLKREECENLFP-SGRVYSQ 251 (359)
Q Consensus 208 ~~i~v~~~--~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~-~g~iY~~ 251 (359)
+.||+.++ ...++.|||.+++|.. |+.+|..|+++++ +|+||++
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTI 303 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEE
T ss_pred CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEE
Confidence 45777443 3489999999999999 8889999999998 9999993
No 41
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=95.59 E-value=0.014 Score=54.51 Aligned_cols=112 Identities=17% Similarity=0.257 Sum_probs=68.7
Q ss_pred CCcEEEeeeeeCCc---ccccccccccCCCCCceeeeeEEeeeccCceeeEEEeeeeeccCccccccc-ccceeEEeeCC
Q 018217 245 SGRVYSQAFHLGGQ---GFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVS-KYKGNYTFTGG 320 (359)
Q Consensus 245 ~g~iY~~~f~~gG~---~~~l~~~c~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 320 (359)
+..+++..|.+||. ...+....+=+..+.....++++-+......++.+.+.+.--.+....... .....|+|+.+
T Consensus 24 ~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~~lslyL~~~~~~~~~v~a~~~~~l~~~~~~~~~~~~~~~~~~F~~~ 103 (312)
T 3hqi_A 24 GEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQG 103 (312)
T ss_dssp TCCEECCCBCC--CCCCEEEEEEETTCCC--CTTEEEEEEEEEECCC-CEEEEEEEEEECTTSCEEEEEECSSCEEECTT
T ss_pred CCeEeeCCcccCCCCCceEEEEEECCCCCccCCCcEEEEEEEcCCCCCcEEEEEEEEEEeCCCCcccccccCCceeCCCC
Confidence 56788888999994 333322221111112234667776644333345666666544432222222 22567899888
Q ss_pred cccccccCCCCCCceeeeCCCceeecceEEEEeeeeee
Q 018217 321 KAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 321 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
.++|+..+ ++|..+.+..+.|-.||.|-++++++|+
T Consensus 104 ~~wG~~~F--i~~~~L~~~~~~yl~dD~l~i~~~v~v~ 139 (312)
T 3hqi_A 104 KDWGFKKF--IRRGFLLDEANGLLPDDKLTLFCEVSVV 139 (312)
T ss_dssp CEEEEEEE--EEHHHHTCGGGCCCGGGCEEEEEEEEEE
T ss_pred CCcCHHHh--ccHHHhhccccCeecCCEEEEEEEEEEE
Confidence 78988777 8888888777789999999999999986
No 42
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=94.08 E-value=0.13 Score=42.64 Aligned_cols=111 Identities=10% Similarity=0.119 Sum_probs=66.1
Q ss_pred CcEEEeeeeeCCcccccccccccCCC-CCceeeeeEEeeeccCc---eeeEEEeeeeeccCcccccccccceeEEeeC-C
Q 018217 246 GRVYSQAFHLGGQGFFLSAHCNMDQQ-SSFHCFGLFLGMQEKGS---VSFAVDYEFAARSKPTEEFVSKYKGNYTFTG-G 320 (359)
Q Consensus 246 g~iY~~~f~~gG~~~~l~~~c~~~~~-~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 320 (359)
..+|+..|..||..-.+....+=+.. +.....+++|-+..... -++.++|.+.--.+.....-...+..++|.. +
T Consensus 33 ~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l~~~~~~~~~~~~~~~~~F~~~~ 112 (155)
T 2foj_A 33 ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKE 112 (155)
T ss_dssp SCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEECCSSCGGGCEEEEEEEEEETTB
T ss_pred CceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEEEcCCCCcceEEeccEEEeCCCC
Confidence 57888888999975444333211110 12345778876643211 1355566664433221121112355777875 5
Q ss_pred cccccccCCCCCCceeeeCCCceeecceEEEEeeeeee
Q 018217 321 KAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 321 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
.++|+..+ ++|..+.+..+.|.+||.|-++|+++|.
T Consensus 113 ~~wG~~~F--i~~~~L~~~~~~yl~dD~l~Ie~~V~V~ 148 (155)
T 2foj_A 113 NDWGFSNF--MAWSEVTDPEKGFIDDDKVTFEVFVQAD 148 (155)
T ss_dssp CEEEEEEE--EEHHHHTCTTTSSCBTTBEEEEEEEEEC
T ss_pred CCEeECCe--EEHHHhcCcCCCceECCEEEEEEEEEEe
Confidence 56887666 7888887666779999999999999985
No 43
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.78 E-value=0.043 Score=56.39 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=32.1
Q ss_pred CCeEEEeeCCCCceEe---ccCCCcceEEEee--CCcEEEe
Q 018217 216 VKVVEFERPRQQCVVY---LDLKREECENLFP--SGRVYSQ 251 (359)
Q Consensus 216 ~~~v~~ydp~~~~W~~---m~~~R~~~~v~v~--~g~iY~~ 251 (359)
...++.|||.+++|.. |+.+|..|+++++ +|+||+.
T Consensus 487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~ 527 (656)
T 1k3i_A 487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNG 527 (656)
T ss_dssp CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEE
T ss_pred ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEec
Confidence 4679999999999998 7889999998888 9999983
No 44
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=91.28 E-value=0.037 Score=43.58 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=36.4
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
.||+|+.||++.+...-....+++-|++|++++|++.|.+-+.+
T Consensus 63 ~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 63 PVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 37899999999885423468899999999999999999987653
No 45
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=89.32 E-value=0.27 Score=41.88 Aligned_cols=45 Identities=13% Similarity=0.285 Sum_probs=33.7
Q ss_pred eeCCcchHHHHHHHhhccChhhHHHHHHHHccCC--CCChhhHHHHHH
Q 018217 13 STTAAPALLDVLMAADKFEVASCMRYCSRLLRNM--PMTPESALLYLE 58 (359)
Q Consensus 13 ~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~--~l~~~Ncl~i~~ 58 (359)
.++. +.+.+|+.||+||+|..|++.||+.+..+ +-+++---.++.
T Consensus 100 ~vd~-~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~ 146 (169)
T 3v7d_A 100 KVDQ-EMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFN 146 (169)
T ss_dssp CSCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred cCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcC
Confidence 4665 89999999999999999999999998441 444444333333
No 46
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=83.61 E-value=1.9 Score=42.92 Aligned_cols=110 Identities=11% Similarity=0.135 Sum_probs=65.2
Q ss_pred cEEEeeeeeCCcccccccccccCCC-CCceeeeeEEeeeccC-ce--eeEEEeeeeeccCcccccccccceeEEeeC-Cc
Q 018217 247 RVYSQAFHLGGQGFFLSAHCNMDQQ-SSFHCFGLFLGMQEKG-SV--SFAVDYEFAARSKPTEEFVSKYKGNYTFTG-GK 321 (359)
Q Consensus 247 ~iY~~~f~~gG~~~~l~~~c~~~~~-~~~~~~~~~~g~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 321 (359)
.+|+..|.+||..-.+.....-+.. +......++|-+.... +. .+.+.+.+.--....+..-...+..+.|.. +.
T Consensus 46 ~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l~n~~~~~~~~~~~~~~~F~~~~~ 125 (522)
T 2f1z_A 46 SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKEN 125 (522)
T ss_dssp CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEECCTTCGGGCEEEECCEEECGGGC
T ss_pred ceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEEEcCCCCccceeccceeEecCCCC
Confidence 7888889999975444332211100 0234567887663321 11 155556554433222222222356677764 56
Q ss_pred ccccccCCCCCCceeeeCCCceeecceEEEEeeeeee
Q 018217 322 AVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 322 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++|+..+ ++|+.+.+..+.|..||.+-++++++|.
T Consensus 126 ~wG~~~F--i~~~~L~~~~~g~L~nD~l~i~~~V~v~ 160 (522)
T 2f1z_A 126 DWGFSNF--MAWSEVTDPEKGFIDDDKVTFEVFVQAD 160 (522)
T ss_dssp EEEESSS--SBHHHHSCGGGSSCBTTBEEEEEEEEEC
T ss_pred Ccchhhe--eEhhHhcCcccCcccCCcEEEEEEeecc
Confidence 7899876 7999998766778889999999998874
No 47
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=83.43 E-value=0.48 Score=40.37 Aligned_cols=28 Identities=11% Similarity=0.353 Sum_probs=20.3
Q ss_pred CCCceeeeCCCceeecceEEEEeeeeee
Q 018217 331 IPWTSFMADDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 331 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++|+.+-+.++.|-.||.|-++++++|.
T Consensus 146 i~~~~L~~~~~~yL~dD~l~I~~~V~i~ 173 (178)
T 4gjh_A 146 VSHSTLENSKNTYIKDDTLFLKVAVDLT 173 (178)
T ss_dssp EEHHHHHCTTCCSSBTTBEEEEEEECCT
T ss_pred eEHHHhhccccCcCcCCEEEEEEEEEec
Confidence 4444443334779999999999999875
No 48
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=82.08 E-value=4.2 Score=36.72 Aligned_cols=95 Identities=6% Similarity=0.083 Sum_probs=67.0
Q ss_pred eCCcchHHHHHHHhhccChhhHHHHHHHHccCC-----------CCChhhHHHHHHhccccccccChHHHHHHHHHHHhc
Q 018217 14 TTAAPALLDVLMAADKFEVASCMRYCSRLLRNM-----------PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLAS 82 (359)
Q Consensus 14 i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~-----------~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~ 82 (359)
++. +|+..++..|+.++.+.|.+.|.+|+.+. .|+.+.-..++.--. . ....-.++.+++.+|+..
T Consensus 139 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~-L-~v~sE~~vf~av~~W~~~ 215 (279)
T 3i3n_A 139 LHL-SNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLE-I-TVDSEEVLFETVLKWVQR 215 (279)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSS-C-CCSCHHHHHHHHHHHHHT
T ss_pred CCc-chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcC-C-CCCCHHHHHHHHHHHHHc
Confidence 565 89999999999999999999999998761 234444444443211 0 011345788899999875
Q ss_pred c-------hhhhhcccccccccCHHHHHHHhcCCCcc
Q 018217 83 R-------YKDMTKFQDEVMALPLAGVEAILSSDDLQ 112 (359)
Q Consensus 83 n-------f~~v~~~~~eFl~L~~~~l~~lL~sd~L~ 112 (359)
+ +.++.+ .=-|..+|.+.|..++..+.+-
T Consensus 216 ~~~~r~~~~~~ll~-~VRf~l~~~~~L~~~v~~~~l~ 251 (279)
T 3i3n_A 216 NAEERERYFEELFK-LLRLSQMKPTYLTRHVKPERLV 251 (279)
T ss_dssp THHHHTTTHHHHHT-TSCGGGSCHHHHHHTTTTSHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCHHHHHHHhhccchh
Confidence 4 455665 6678889999998888776553
No 49
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=79.23 E-value=0.4 Score=42.00 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=36.1
Q ss_pred eeeeEeeCeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 3 LLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 3 lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
||+|+-+|++.+...-....+++-|.+|+|+.|++.|.+-|.+
T Consensus 70 ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 70 VLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 7899999999885423457899999999999999999988766
No 50
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=79.11 E-value=0.9 Score=39.06 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=23.7
Q ss_pred ccccccCCCCCCceeeeCCCceeecceEEEEeeeeee
Q 018217 322 AVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 322 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++|+..+ ++|+.+.+ .+.|..||.|.++++++|.
T Consensus 157 ~wG~~~F--i~~~~L~~-~~gyl~dD~l~I~~~V~V~ 190 (192)
T 1ca9_A 157 ASGCPLF--CPVSKMEA-KNSYVRDDAIFIKAIVDLT 190 (192)
T ss_dssp CEEEEEE--EETHHHHS-SCSSCBTTEEEEEEEECCT
T ss_pred CcChhhe--eEHHHhhh-ccCCEeCCEEEEEEEEEec
Confidence 4555443 45555543 4668899999999999985
No 51
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.89 E-value=1.4 Score=34.03 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=32.2
Q ss_pred CeEeeCCcchHHHHHHHhhccChhhHHHHHHHHccCCCC
Q 018217 10 NTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM 48 (359)
Q Consensus 10 g~i~i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~~~l 48 (359)
+.-.++. +|...++..|+.++.+.|.+.|.+|+.+ +.
T Consensus 4 ~~~~L~~-~NCl~i~~~A~~~~~~~L~~~a~~fi~~-nF 40 (105)
T 2eqx_A 4 GSSGVQV-GNCLQVMWLADRHSDPELYTAAKHCAKT-HL 40 (105)
T ss_dssp CCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred hhccCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH-HH
Confidence 3445675 9999999999999999999999999988 55
No 52
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=73.26 E-value=0.38 Score=38.84 Aligned_cols=40 Identities=13% Similarity=0.105 Sum_probs=31.1
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhH-HHHHHH
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASC-MRYCSR 41 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l-~~~C~~ 41 (359)
.||+|+-||++.+...-.+..+++-|++|+|+.+ ++.||.
T Consensus 66 ~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC~ 106 (124)
T 1s1g_A 66 CVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCY 106 (124)
T ss_dssp HHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHHH
T ss_pred HHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHHH
Confidence 3789999999987541357899999999999887 356653
No 53
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=72.68 E-value=1.6 Score=36.32 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=23.0
Q ss_pred ccccccCCCCCCceeeeCCCceeecceEEEEeeeeee
Q 018217 322 AVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 322 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++|+..+ ++|+.+.+. +.|..||.|-++++++|.
T Consensus 133 ~~G~~~F--i~~~~L~~~-~gyl~dD~l~I~~~V~v~ 166 (168)
T 1d00_A 133 ASGCPLF--CPVSKMEAK-NSYVRDDAIFIKAIVDLT 166 (168)
T ss_dssp CEEEEEE--EETTTTTSS-SSSSBTTEEEEEEEECCT
T ss_pred CcCcceE--eEHHHhccc-CCceeCCEEEEEEEEEec
Confidence 4555443 555555432 258899999999999885
No 54
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=68.10 E-value=2.8 Score=31.87 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=29.7
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhcc
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 83 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~n 83 (359)
.++.+|+..++.+|+.| .++.|.+.|.+|+.+|
T Consensus 76 ~~~~~~~~~ll~~A~~~----~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKY----IVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHhh
Confidence 57889999999999976 9999999999999875
No 55
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=65.84 E-value=0.48 Score=36.98 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=29.5
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhH-HHHHH
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASC-MRYCS 40 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l-~~~C~ 40 (359)
.||+|+-||++.+...-.+..+++-|++|+|+.+ ++.||
T Consensus 53 ~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 53 HILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred HHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence 3789999999887541347889999999999875 35555
No 56
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=61.35 E-value=0.52 Score=38.85 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=30.3
Q ss_pred ceeeeEeeCeEeeCCcchHHHHHHHhhccChhhH-HHHHH
Q 018217 2 ELLNFMYSNTLSTTAAPALLDVLMAADKFEVASC-MRYCS 40 (359)
Q Consensus 2 ~lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l-~~~C~ 40 (359)
.||+|+-||++.+...-.+..+++-|++|+|+.+ ++.||
T Consensus 88 ~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC 127 (140)
T 2nz0_B 88 CVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 127 (140)
T ss_dssp HHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTT
T ss_pred HHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 3789999999987541357899999999999886 44554
No 57
>2jmb_A AGR_L_42P, hypothetical protein ATU4866; structural genomics, ontario centre for structural proteomic unknown function; NMR {Agrobacterium tumefaciens str}
Probab=61.09 E-value=4.2 Score=29.56 Aligned_cols=39 Identities=33% Similarity=0.601 Sum_probs=28.6
Q ss_pred cccccccceeEEeeCCcccccccCCCCCCceeeeCCCceeec-ceEEE
Q 018217 305 EEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFIN-GILHL 351 (359)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~ 351 (359)
|...+-+.|.|.+||.. ..|.|= +.|.||.. |+| ||||=
T Consensus 31 G~r~sAYqGrY~v~G~~-I~Y~DD-----tGFtAdG~--f~d~~vL~H 70 (79)
T 2jmb_A 31 GNRKSAYQGRYEVRGAH-INYWDD-----TGFTADGD--FVSANELHH 70 (79)
T ss_dssp TTEEEEEEEEEEEETTE-EEEBCT-----TSCBCCEE--CCSSSEEEE
T ss_pred CCccccceEEEEEeCce-EEEEcC-----CCceEeee--eccCCEEee
Confidence 45556678999999984 555443 56788776 899 99983
No 58
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=60.36 E-value=39 Score=27.39 Aligned_cols=27 Identities=22% Similarity=0.506 Sum_probs=19.5
Q ss_pred Cceeee----CCCceeecceEEEEeeeeeeC
Q 018217 333 WTSFMA----DDSLYFINGILHLRAELTIRH 359 (359)
Q Consensus 333 w~~~~~----~~~~~~~~~~~~~~~~~~~~~ 359 (359)
|+.||. ..+.|-.||.|.++++++|+.
T Consensus 127 ~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 127 YVTFMHLEALRQRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp EEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred EeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence 455655 346688899999999999873
No 59
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=60.20 E-value=2.9 Score=37.22 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=28.3
Q ss_pred eCCcchHHHHHHHhhccChhhHHHHHHHHccC
Q 018217 14 TTAAPALLDVLMAADKFEVASCMRYCSRLLRN 45 (359)
Q Consensus 14 i~~~~nV~~lL~aA~~lqv~~l~~~C~~fL~~ 45 (359)
++. +|+..++..|+.++.+.+.+.|.+|+.+
T Consensus 131 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~ 161 (256)
T 3hve_A 131 IAA-ENCIGIRDFALHYCLHHVHYLATEYLET 161 (256)
T ss_dssp CCS-STTHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCH-hhHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 455 8999999999999999999999999876
No 60
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=54.34 E-value=8.7 Score=29.99 Aligned_cols=33 Identities=6% Similarity=0.259 Sum_probs=29.2
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhcc
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 83 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~n 83 (359)
.++.+|...++..|+.| .++.|.+.|.+|+.+|
T Consensus 94 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYL----QMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhc
Confidence 57888999999999976 8999999999999764
No 61
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=53.13 E-value=5 Score=32.04 Aligned_cols=38 Identities=8% Similarity=0.052 Sum_probs=28.5
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhcchhhhh
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMT 88 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~nf~~v~ 88 (359)
.++.+|...++..|+.| .++.|.+.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKEL----RVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHhccCCC
Confidence 57889999999999976 899999999999999887644
No 62
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=50.79 E-value=50 Score=28.81 Aligned_cols=27 Identities=11% Similarity=0.328 Sum_probs=20.6
Q ss_pred CCceeee----CCCceeecceEEEEeeeeee
Q 018217 332 PWTSFMA----DDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 332 ~w~~~~~----~~~~~~~~~~~~~~~~~~~~ 358 (359)
-|+.||. .++.|-.||.|.++++++|.
T Consensus 193 G~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~ 223 (228)
T 1flk_A 193 GCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 223 (228)
T ss_dssp SEEEEEEHHHHSSSTTCCSSEEEEEEECCCT
T ss_pred CHHHeeEHHHHccCCCccCCEEEEEEEEEcc
Confidence 3556666 34668889999999999874
No 63
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=50.74 E-value=14 Score=31.78 Aligned_cols=26 Identities=12% Similarity=0.361 Sum_probs=19.9
Q ss_pred Cceeee----CCCceeecceEEEEeeeeee
Q 018217 333 WTSFMA----DDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 333 w~~~~~----~~~~~~~~~~~~~~~~~~~~ 358 (359)
|+.||. .++.|..||.|-++++++|.
T Consensus 158 ~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~ 187 (198)
T 4ghu_A 158 CPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (198)
T ss_dssp EEEEEEHHHHHHTTSCBTTBEEEEEEECCT
T ss_pred chhEeEHHHhhhcCCeeCCEEEEEEEEEec
Confidence 455665 24668889999999999885
No 64
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=50.44 E-value=3.9 Score=31.47 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=29.4
Q ss_pred ceeeeEee-CeEeeCCcchHHHHHHHhhccChhhH-HHHHH
Q 018217 2 ELLNFMYS-NTLSTTAAPALLDVLMAADKFEVASC-MRYCS 40 (359)
Q Consensus 2 ~lL~y~YT-g~i~i~~~~nV~~lL~aA~~lqv~~l-~~~C~ 40 (359)
.||+|+-| |++.+...-.+..+++-|++++|+++ ++.|.
T Consensus 55 ~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 55 AILYFYQSGGRLRRPVNVPLDVFSEEIKFYELGENAFERYR 95 (100)
T ss_dssp HHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 37889998 89987542357889999999999774 44444
No 65
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=49.55 E-value=4.8 Score=32.23 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=30.9
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhcchh
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYK 85 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~nf~ 85 (359)
.++.+|...++..|+.| .++.|.+.|.+|+.+++.
T Consensus 100 ~i~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFL----SVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCCTTTHHHHHHHHHHH----TCGGGHHHHHHHTTCCCS
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhcc
Confidence 57889999999999976 899999999999988764
No 66
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=44.59 E-value=13 Score=28.40 Aligned_cols=31 Identities=3% Similarity=0.006 Sum_probs=27.7
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHh
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 81 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~ 81 (359)
.++.+|...++..|+.| .++.|.+.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYL----KVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57888999999999976 89999999999985
No 67
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=44.26 E-value=9.2 Score=29.60 Aligned_cols=44 Identities=7% Similarity=0.085 Sum_probs=31.4
Q ss_pred HHHHHHHccC--CCCChhhHHHHHHhccccccccChHHHHHHHHHHHhcc
Q 018217 36 MRYCSRLLRN--MPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 83 (359)
Q Consensus 36 ~~~C~~fL~~--~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~n 83 (359)
.+..-+|+-. ..++.+|...++..|+.| .++.|.+.|.+|+.++
T Consensus 72 f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 72 FGLLLDFFYTGHLALTSGNRDQVLLAAREL----RVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHHHHSCCCCCTTTHHHHHHHHHHT----TCHHHHHHHHHCC---
T ss_pred HHHHHHHHcCCCCccCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHc
Confidence 3344455432 257888999999999976 8999999999998765
No 68
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=42.19 E-value=16 Score=28.16 Aligned_cols=43 Identities=12% Similarity=0.196 Sum_probs=32.7
Q ss_pred HHHHHHHHccC--CCCChhhHHHHHHhccccccccChHHHHHHHHHHHh
Q 018217 35 CMRYCSRLLRN--MPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 81 (359)
Q Consensus 35 l~~~C~~fL~~--~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~ 81 (359)
..+..-+|+-. ..++.+|...++..|+.+ .++.|.+.|.+|+.
T Consensus 73 ~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l----~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 73 GLGQVLEFMYTAKLSLSPENVDDVLAVATFL----QMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHHHHHSCCCCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 34444555532 257888999999999876 89999999999985
No 69
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=41.07 E-value=2.1 Score=33.92 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=27.7
Q ss_pred eeeeEeeCeEeeCCcchHHHHHHHhhccChhhHH
Q 018217 3 LLNFMYSNTLSTTAAPALLDVLMAADKFEVASCM 36 (359)
Q Consensus 3 lL~y~YTg~i~i~~~~nV~~lL~aA~~lqv~~l~ 36 (359)
||+|+-||++.+...-.+..+++-|.+|+|++..
T Consensus 60 ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~ 93 (115)
T 3kvt_A 60 IINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQ 93 (115)
T ss_dssp HHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGG
T ss_pred HHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHH
Confidence 7899999999886423578999999999997754
No 70
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=38.97 E-value=21 Score=27.52 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=28.4
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhc
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLAS 82 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~ 82 (359)
.++.+|...++..|+.| .++.|.+.|.+|+.+
T Consensus 88 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEIL----EIEYLEEQCLKMLET 119 (121)
T ss_dssp CCCGGGHHHHHHHHHHH----TCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHH
Confidence 57889999999999976 899999999999865
No 71
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=36.93 E-value=26 Score=26.80 Aligned_cols=30 Identities=7% Similarity=0.111 Sum_probs=26.7
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHH
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYL 80 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi 80 (359)
.++.+|...++..|+.| .++.|.+.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~----~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLL----EIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHh
Confidence 57889999999999976 8999999999887
No 72
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=36.39 E-value=71 Score=26.89 Aligned_cols=26 Identities=12% Similarity=0.361 Sum_probs=19.3
Q ss_pred Cceeee----CCCceeecceEEEEeeeeee
Q 018217 333 WTSFMA----DDSLYFINGILHLRAELTIR 358 (359)
Q Consensus 333 w~~~~~----~~~~~~~~~~~~~~~~~~~~ 358 (359)
|+.||. .++.|-.||.|.++++++|.
T Consensus 158 ~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~ 187 (192)
T 2gkw_A 158 CPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (192)
T ss_dssp EEEEEEHHHHHHTTSCBTTEEEEEEEECCT
T ss_pred hHHEeEHHHhCcCCCeeCCEEEEEEEEEcC
Confidence 445555 23568889999999999875
No 73
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=35.74 E-value=10 Score=21.51 Aligned_cols=14 Identities=36% Similarity=0.294 Sum_probs=12.4
Q ss_pred chHHHHHHHhhccC
Q 018217 18 PALLDVLMAADKFE 31 (359)
Q Consensus 18 ~nV~~lL~aA~~lq 31 (359)
.||+-+|+||.+|.
T Consensus 3 ~nvq~LLeAAeyLE 16 (26)
T 1pd7_B 3 MNIQMLLEAADYLE 16 (26)
T ss_dssp CSTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 58999999999986
No 74
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=27.22 E-value=33 Score=27.84 Aligned_cols=33 Identities=21% Similarity=0.126 Sum_probs=28.2
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhcc
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 83 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~n 83 (359)
.++.+|...++..|+.| .++.|.+.|.+|+.++
T Consensus 99 ~~~~~~~~~ll~~A~~~----~~~~l~~~c~~~l~~~ 131 (172)
T 3htm_A 99 PNLDKMADDLLAAADKY----ALERLKVMCEDALCSN 131 (172)
T ss_dssp TTGGGTHHHHHHHHHHT----TCHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHh
Confidence 46778999999999876 8999999999998754
No 75
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=23.06 E-value=26 Score=27.52 Aligned_cols=34 Identities=21% Similarity=0.123 Sum_probs=24.7
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhcch
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRY 84 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~nf 84 (359)
.++.+|...++..|+.| .++.|.+.|.+|+.++.
T Consensus 90 ~~~~~~~~~ll~~A~~~----~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 90 PNLDKMADDLLAAADKY----ALERLKVMCEDALCSNL 123 (145)
T ss_dssp TTGGGTHHHHHHHHHHT----TCHHHHHHHHCC-----
T ss_pred CCcHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhC
Confidence 46678899999999876 88999999988887654
No 76
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=23.03 E-value=2.3e+02 Score=22.88 Aligned_cols=52 Identities=10% Similarity=0.139 Sum_probs=38.4
Q ss_pred CCChhhHHHHHHhccccccccChHHHHHHHHHHHhcchhhhhcccccccccCHHHHHHHhcC-CCcc
Q 018217 47 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSS-DDLQ 112 (359)
Q Consensus 47 ~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~nf~~v~~~~~eFl~L~~~~l~~lL~s-d~L~ 112 (359)
.++.++++.++..|..+ .++.|.+.|-+|++..+. .-+++++.+++.- +++.
T Consensus 93 ~id~~~l~eLl~AAnyL----~I~~Lld~~c~~va~~i~----------gkt~eeir~~f~I~~d~t 145 (159)
T 2ast_A 93 KVDQGTLFELILAANYL----DIKGLLDVTCKTVANMIK----------GKTPEEIRKTFNIKNDFT 145 (159)
T ss_dssp CSCHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHS----------SCCHHHHHHHTTCCCCSC
T ss_pred cCCHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHc----------CCCHHHHHHHcCCCCCCC
Confidence 48899999999988744 799999999999865332 2456777777764 3444
No 77
>3gbw_A E3 ubiquitin-protein ligase mycbp2; MYC-binding protein 2, protein associated with MYC, PAM, RPM-1, PHR domain, structural genomics, PSI-2; HET: MSE; 1.32A {Mus musculus}
Probab=23.01 E-value=39 Score=28.30 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=29.3
Q ss_pred CeEEEeeCCCCceEe--ccCCCcceEEEeeCCcEEEeeeeeCC
Q 018217 217 KVVEFERPRQQCVVY--LDLKREECENLFPSGRVYSQAFHLGG 257 (359)
Q Consensus 217 ~~v~~ydp~~~~W~~--m~~~R~~~~v~v~~g~iY~~~f~~gG 257 (359)
+.|.+|+....+|.+ ....+..|.| |..||+.||++-|
T Consensus 6 ~~v~RF~s~~~~W~Y~g~s~DaI~F~V---dr~I~l~G~GLYG 45 (164)
T 3gbw_A 6 SVVNRFESHGGGWGYSAHSVEAIRFSA---DTDILLGGLGLFG 45 (164)
T ss_dssp EEEECEEEECSCBCCCTTCCEEEEEEE---SSCEEEEEEEEEC
T ss_pred cEEecccccCCCcccCCCCcceEEEEe---cCCEEEEEEEeec
Confidence 467888888888999 4345666665 8899999988877
No 78
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=22.15 E-value=51 Score=21.56 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=20.4
Q ss_pred CCcccccccC-CCCCCceeee-CCCceeecc
Q 018217 319 GGKAVGYRNL-FAIPWTSFMA-DDSLYFING 347 (359)
Q Consensus 319 ~~~~~~~~~~-~~~~w~~~~~-~~~~~~~~~ 347 (359)
|+++..|++. ..-.|..-++ +..+||||-
T Consensus 1 ~~~~~~~~~~~LP~gWe~~~~~~Gr~Yy~nh 31 (49)
T 2ysb_A 1 GSSGSSGEDLPLPPGWSVDWTMRGRKYYIDH 31 (49)
T ss_dssp CCSSSCCCCCCCCTTEEEEECSSSCEEEEET
T ss_pred CCCCcCCCCCCCCCCceEEECCCCCEEEEEc
Confidence 5556666663 6778887765 677899984
No 79
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=21.04 E-value=34 Score=25.61 Aligned_cols=15 Identities=33% Similarity=0.505 Sum_probs=13.4
Q ss_pred chHHHHHHHhhccCh
Q 018217 18 PALLDVLMAADKFEV 32 (359)
Q Consensus 18 ~nV~~lL~aA~~lqv 32 (359)
+.+.+|+.||++|++
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 689999999999975
No 80
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=20.16 E-value=52 Score=25.37 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=30.1
Q ss_pred HHHHHHccC--CCCChhhHHHHHHhccccccccChHHHHHHHHHHHhc
Q 018217 37 RYCSRLLRN--MPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLAS 82 (359)
Q Consensus 37 ~~C~~fL~~--~~l~~~Ncl~i~~~A~~~~~~~~~~~L~~~a~~fi~~ 82 (359)
+.--+|+-. ..++.+|...++..|+.+ .++.|.+.|.+++.+
T Consensus 74 ~~ll~fiYtg~~~i~~~~v~~ll~aA~~l----~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 74 AQLLNFVYGESVELQPGELRPLQEAARAL----GVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHTTCCEEECGGGHHHHHHHHHHT----TCHHHHHHHHHHC--
T ss_pred HHHHHHHcCCCcCcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHhh
Confidence 334455532 146788999999999876 899999999988754
Done!