Query 018219
Match_columns 359
No_of_seqs 188 out of 1223
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 07:08:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018219.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018219hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 9E-37 2E-41 282.5 30.2 319 4-334 10-337 (358)
2 PRK11272 putative DMT superfam 100.0 4E-32 8.6E-37 247.4 27.9 278 9-328 10-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 1.2E-31 2.7E-36 245.0 28.2 280 8-328 5-290 (299)
4 PRK10532 threonine and homoser 100.0 7.2E-31 1.6E-35 239.2 29.5 280 4-332 9-288 (293)
5 PRK11689 aromatic amino acid e 100.0 1.8E-31 3.8E-36 243.4 24.7 285 5-328 2-290 (295)
6 TIGR00950 2A78 Carboxylate/Ami 100.0 1.8E-30 3.9E-35 233.0 26.9 259 19-321 1-260 (260)
7 PRK15430 putative chlorampheni 100.0 1.1E-30 2.4E-35 238.2 25.3 281 1-326 1-286 (296)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 5.2E-29 1.1E-33 228.2 25.6 283 11-330 6-298 (302)
9 PF06027 DUF914: Eukaryotic pr 100.0 1.8E-27 3.9E-32 215.9 28.7 301 5-334 11-314 (334)
10 TIGR03340 phn_DUF6 phosphonate 100.0 2.4E-27 5.2E-32 214.9 26.8 275 8-322 2-280 (281)
11 PTZ00343 triose or hexose phos 100.0 4.5E-26 9.8E-31 212.0 25.9 284 5-326 47-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 2.4E-25 5.1E-30 199.3 25.2 248 7-300 2-255 (256)
13 COG5006 rhtA Threonine/homoser 99.9 8.7E-24 1.9E-28 177.9 25.5 275 8-330 13-287 (292)
14 COG0697 RhaT Permeases of the 99.9 1.6E-23 3.5E-28 190.5 28.4 286 1-326 1-288 (292)
15 COG2962 RarD Predicted permeas 99.9 3.5E-22 7.5E-27 172.9 22.3 283 1-328 1-286 (293)
16 KOG4510 Permease of the drug/m 99.9 4.4E-25 9.6E-30 186.8 1.4 294 4-328 35-328 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 9.2E-21 2E-25 172.0 23.2 278 8-325 2-288 (290)
18 PF08449 UAA: UAA transporter 99.9 3.7E-19 8E-24 162.9 26.3 266 36-330 32-302 (303)
19 KOG2765 Predicted membrane pro 99.8 4.3E-18 9.4E-23 151.4 16.7 301 4-331 11-396 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.7 9.3E-18 2E-22 150.7 9.1 275 21-332 31-314 (316)
21 KOG2766 Predicted membrane pro 99.7 4.6E-18 1E-22 143.5 5.5 285 4-326 15-300 (336)
22 COG2510 Predicted membrane pro 99.7 2.7E-16 5.9E-21 119.0 10.2 135 7-149 3-138 (140)
23 KOG2234 Predicted UDP-galactos 99.7 8.5E-14 1.8E-18 124.4 27.3 299 7-330 15-327 (345)
24 PF04142 Nuc_sug_transp: Nucle 99.6 2.2E-14 4.8E-19 126.2 18.8 230 67-316 13-244 (244)
25 KOG1580 UDP-galactose transpor 99.6 2.2E-14 4.9E-19 119.9 17.2 258 36-325 53-313 (337)
26 KOG1444 Nucleotide-sugar trans 99.6 7E-13 1.5E-17 116.9 24.3 292 5-334 10-309 (314)
27 KOG1581 UDP-galactose transpor 99.6 2.7E-14 5.9E-19 124.2 15.2 265 35-329 50-317 (327)
28 KOG1443 Predicted integral mem 99.6 4.1E-13 8.8E-18 116.8 19.2 253 36-324 45-314 (349)
29 COG2510 Predicted membrane pro 99.6 2.2E-13 4.7E-18 103.4 14.5 136 187-325 4-139 (140)
30 PF00892 EamA: EamA-like trans 99.5 3.5E-14 7.7E-19 112.3 9.6 125 17-149 1-125 (126)
31 PF00892 EamA: EamA-like trans 99.4 6.1E-13 1.3E-17 105.2 7.4 125 196-324 1-125 (126)
32 KOG3912 Predicted integral mem 99.4 1.7E-12 3.7E-17 111.5 9.3 278 20-324 16-333 (372)
33 PF06800 Sugar_transport: Suga 99.4 1.9E-10 4E-15 101.1 21.1 222 68-322 42-268 (269)
34 KOG1583 UDP-N-acetylglucosamin 99.4 4.5E-12 9.8E-17 108.8 10.6 265 36-325 33-314 (330)
35 COG5070 VRG4 Nucleotide-sugar 99.3 7.2E-12 1.6E-16 104.2 9.6 262 36-330 37-301 (309)
36 PF05653 Mg_trans_NIPA: Magnes 99.3 1E-10 2.3E-15 106.0 17.3 278 1-327 1-294 (300)
37 PRK13499 rhamnose-proton sympo 99.3 1.8E-09 3.8E-14 98.7 24.3 302 1-325 1-341 (345)
38 TIGR00950 2A78 Carboxylate/Ami 99.3 1.3E-10 2.8E-15 104.2 15.4 132 5-145 126-259 (260)
39 PF13536 EmrE: Multidrug resis 99.2 2.6E-11 5.6E-16 94.2 8.0 104 41-151 2-107 (113)
40 KOG1442 GDP-fucose transporter 99.2 3E-11 6.5E-16 103.6 7.0 278 24-334 45-336 (347)
41 PRK10532 threonine and homoser 99.2 1.8E-09 3.9E-14 98.5 16.8 136 6-151 147-282 (293)
42 PF03151 TPT: Triose-phosphate 99.1 1.3E-09 2.7E-14 89.6 13.3 138 187-325 1-153 (153)
43 PLN00411 nodulin MtN21 family 99.1 4.2E-09 9.1E-14 98.1 16.9 138 6-152 188-330 (358)
44 PRK11272 putative DMT superfam 99.1 3.3E-09 7.1E-14 96.8 15.4 137 6-150 149-285 (292)
45 PRK15430 putative chlorampheni 99.1 1.7E-09 3.7E-14 98.8 12.3 138 183-324 5-144 (296)
46 KOG1582 UDP-galactose transpor 99.0 1.1E-09 2.5E-14 93.9 9.7 259 36-330 75-337 (367)
47 KOG4314 Predicted carbohydrate 99.0 1.1E-09 2.5E-14 89.6 8.3 214 79-327 61-278 (290)
48 TIGR03340 phn_DUF6 phosphonate 99.0 4.9E-09 1.1E-13 95.1 13.3 133 188-325 3-135 (281)
49 PRK11689 aromatic amino acid e 99.0 8.7E-09 1.9E-13 94.1 14.7 133 6-150 155-287 (295)
50 KOG2922 Uncharacterized conser 99.0 1.6E-09 3.4E-14 95.7 8.7 280 1-327 15-308 (335)
51 TIGR00688 rarD rarD protein. T 99.0 5.1E-09 1.1E-13 93.6 11.8 136 186-324 2-141 (256)
52 TIGR00803 nst UDP-galactose tr 98.9 5.2E-09 1.1E-13 91.5 9.7 216 97-323 3-222 (222)
53 PRK11453 O-acetylserine/cystei 98.9 6.7E-08 1.5E-12 88.5 16.0 138 6-150 142-287 (299)
54 PRK02971 4-amino-4-deoxy-L-ara 98.8 6.2E-08 1.3E-12 76.5 11.8 122 186-328 2-125 (129)
55 TIGR00817 tpt Tpt phosphate/ph 98.8 4E-08 8.7E-13 90.1 11.4 139 6-150 144-293 (302)
56 PF13536 EmrE: Multidrug resis 98.8 1.8E-08 4E-13 78.1 7.5 107 221-328 3-109 (113)
57 COG4975 GlcU Putative glucose 98.8 2.5E-09 5.4E-14 90.7 1.3 275 7-324 2-284 (288)
58 PF03151 TPT: Triose-phosphate 98.7 3.7E-07 8.1E-12 74.8 14.0 133 8-147 1-150 (153)
59 PTZ00343 triose or hexose phos 98.7 5.4E-07 1.2E-11 84.2 15.1 138 186-325 49-186 (350)
60 PRK15051 4-amino-4-deoxy-L-ara 98.6 6.6E-07 1.4E-11 68.9 11.8 70 74-149 39-108 (111)
61 TIGR00776 RhaT RhaT L-rhamnose 98.6 7.9E-07 1.7E-11 80.9 13.3 128 6-149 151-287 (290)
62 COG0697 RhaT Permeases of the 98.6 2E-06 4.4E-11 77.9 15.6 133 6-149 153-286 (292)
63 PRK15051 4-amino-4-deoxy-L-ara 98.5 6.5E-07 1.4E-11 68.9 7.6 66 259-324 43-108 (111)
64 PRK02971 4-amino-4-deoxy-L-ara 98.4 6.7E-06 1.5E-10 64.9 12.4 118 7-149 2-121 (129)
65 COG2962 RarD Predicted permeas 98.4 1.6E-06 3.6E-11 76.0 9.6 139 185-326 6-145 (293)
66 PF06027 DUF914: Eukaryotic pr 98.3 1.3E-05 2.7E-10 73.7 13.8 139 4-150 165-305 (334)
67 COG5006 rhtA Threonine/homoser 98.3 1E-05 2.2E-10 69.4 11.5 135 6-149 147-281 (292)
68 PF06379 RhaT: L-rhamnose-prot 98.1 0.0016 3.5E-08 59.0 21.4 303 1-325 1-340 (344)
69 PF08449 UAA: UAA transporter 98.0 9.7E-05 2.1E-09 67.7 13.3 132 197-334 11-145 (303)
70 KOG4510 Permease of the drug/m 98.0 2.8E-06 6E-11 73.3 2.6 137 183-327 35-171 (346)
71 PRK10452 multidrug efflux syst 98.0 2.3E-05 4.9E-10 60.8 6.9 68 260-327 37-105 (120)
72 PF05653 Mg_trans_NIPA: Magnes 97.9 5.1E-05 1.1E-09 69.1 9.3 125 182-330 3-127 (300)
73 PF04657 DUF606: Protein of un 97.9 0.00027 5.9E-09 56.6 11.3 132 187-322 2-138 (138)
74 PRK10650 multidrug efflux syst 97.8 0.00028 6.1E-09 53.7 10.4 64 79-148 42-106 (109)
75 PF06800 Sugar_transport: Suga 97.8 0.0003 6.5E-09 62.3 11.4 117 4-128 135-251 (269)
76 PF04657 DUF606: Protein of un 97.7 0.00093 2E-08 53.5 11.7 130 9-147 3-138 (138)
77 PRK09541 emrE multidrug efflux 97.7 0.00012 2.5E-09 56.1 6.0 68 260-327 37-105 (110)
78 COG2076 EmrE Membrane transpor 97.6 0.00022 4.8E-09 53.4 6.9 66 78-149 36-102 (106)
79 PRK09541 emrE multidrug efflux 97.6 0.00032 6.9E-09 53.7 7.9 68 77-150 35-103 (110)
80 PRK10452 multidrug efflux syst 97.6 0.00021 4.6E-09 55.4 6.9 68 77-150 35-103 (120)
81 PRK11431 multidrug efflux syst 97.6 0.00033 7.2E-09 53.0 7.1 65 79-149 36-101 (105)
82 COG3238 Uncharacterized protei 97.5 0.0012 2.7E-08 52.8 9.8 139 185-326 4-147 (150)
83 KOG1441 Glucose-6-phosphate/ph 97.5 0.00043 9.4E-09 62.9 8.0 138 4-149 160-306 (316)
84 PF10639 UPF0546: Uncharacteri 97.5 0.00032 6.8E-09 53.5 5.9 110 13-148 2-112 (113)
85 COG2076 EmrE Membrane transpor 97.3 0.00045 9.7E-09 51.8 5.3 66 261-326 38-104 (106)
86 PF04142 Nuc_sug_transp: Nucle 97.3 0.00087 1.9E-08 59.2 8.0 79 251-330 16-94 (244)
87 PF07857 DUF1632: CEO family ( 97.3 0.0051 1.1E-07 54.2 12.2 193 8-211 1-208 (254)
88 PRK11431 multidrug efflux syst 97.3 0.00071 1.5E-08 51.2 5.9 65 261-325 37-102 (105)
89 PRK10650 multidrug efflux syst 97.3 0.0029 6.2E-08 48.2 9.1 64 261-324 43-107 (109)
90 KOG2765 Predicted membrane pro 97.1 0.0036 7.8E-08 57.1 9.3 142 4-151 244-391 (416)
91 PF00893 Multi_Drug_Res: Small 97.0 0.0034 7.4E-08 46.6 7.0 56 261-316 37-93 (93)
92 PF00893 Multi_Drug_Res: Small 97.0 0.0059 1.3E-07 45.3 8.0 57 78-140 35-92 (93)
93 KOG2922 Uncharacterized conser 96.7 0.0011 2.3E-08 59.4 2.9 130 181-334 16-145 (335)
94 COG3238 Uncharacterized protei 96.5 0.07 1.5E-06 42.9 11.2 136 6-148 4-144 (150)
95 KOG1581 UDP-galactose transpor 96.4 0.058 1.3E-06 48.1 11.5 139 4-150 169-313 (327)
96 PRK13499 rhamnose-proton sympo 96.4 0.18 4E-06 46.6 15.1 145 4-150 171-341 (345)
97 PF07857 DUF1632: CEO family ( 96.4 0.0058 1.3E-07 53.9 5.0 132 187-330 1-139 (254)
98 COG4975 GlcU Putative glucose 96.2 0.0041 8.9E-08 53.5 3.3 132 187-328 3-139 (288)
99 KOG2234 Predicted UDP-galactos 96.1 0.23 4.9E-06 45.5 14.1 140 189-329 18-168 (345)
100 PF10639 UPF0546: Uncharacteri 96.0 0.037 8E-07 42.3 7.0 109 193-323 3-112 (113)
101 TIGR00803 nst UDP-galactose tr 95.8 0.035 7.6E-07 48.3 7.2 58 83-146 163-220 (222)
102 KOG1580 UDP-galactose transpor 95.3 0.16 3.4E-06 43.7 9.2 138 5-150 170-313 (337)
103 KOG4314 Predicted carbohydrate 95.3 0.016 3.5E-07 48.2 3.0 64 265-328 65-128 (290)
104 KOG1443 Predicted integral mem 94.0 0.51 1.1E-05 42.4 9.4 122 205-327 35-158 (349)
105 KOG1444 Nucleotide-sugar trans 93.4 1.3 2.8E-05 40.1 11.1 131 189-325 15-149 (314)
106 PF06379 RhaT: L-rhamnose-prot 93.0 0.19 4.2E-06 45.8 5.4 147 183-333 4-161 (344)
107 KOG4831 Unnamed protein [Funct 92.4 2.3 5E-05 31.7 9.2 111 11-149 7-124 (125)
108 KOG1442 GDP-fucose transporter 91.1 0.41 8.9E-06 42.2 4.9 142 5-153 183-330 (347)
109 COG5070 VRG4 Nucleotide-sugar 90.8 1.4 3E-05 37.8 7.6 135 9-150 157-296 (309)
110 PRK02237 hypothetical protein; 90.4 0.98 2.1E-05 33.9 5.7 47 282-328 62-108 (109)
111 KOG2766 Predicted membrane pro 89.3 0.18 3.8E-06 44.0 1.2 139 183-329 15-154 (336)
112 PF02694 UPF0060: Uncharacteri 87.6 0.74 1.6E-05 34.5 3.4 44 285-328 63-106 (107)
113 PF07168 Ureide_permease: Urei 86.5 1.1 2.3E-05 40.3 4.3 130 12-148 1-144 (336)
114 COG1742 Uncharacterized conser 85.7 3.5 7.5E-05 30.7 5.9 47 282-328 61-107 (109)
115 KOG3912 Predicted integral mem 85.6 1.4 3E-05 39.2 4.5 66 261-326 94-159 (372)
116 KOG1582 UDP-galactose transpor 79.4 15 0.00032 32.8 8.4 139 6-152 189-334 (367)
117 PF06570 DUF1129: Protein of u 78.5 42 0.0009 28.7 11.4 32 69-101 144-175 (206)
118 PRK02237 hypothetical protein; 75.9 18 0.00038 27.3 6.9 47 98-150 58-105 (109)
119 PF04342 DUF486: Protein of un 71.0 6.1 0.00013 29.6 3.4 31 294-324 77-107 (108)
120 KOG4831 Unnamed protein [Funct 69.9 13 0.00029 27.8 5.0 59 265-323 64-123 (125)
121 PRK06638 NADH:ubiquinone oxido 67.8 77 0.0017 27.0 11.9 24 294-317 133-156 (198)
122 COG1742 Uncharacterized conser 66.7 17 0.00037 27.1 5.0 42 103-150 63-104 (109)
123 PF02694 UPF0060: Uncharacteri 65.5 20 0.00043 27.0 5.2 52 93-150 51-103 (107)
124 PF05297 Herpes_LMP1: Herpesvi 59.9 3 6.4E-05 37.0 0.0 11 184-194 105-115 (381)
125 KOG1583 UDP-N-acetylglucosamin 58.8 1.4E+02 0.003 26.9 11.1 134 6-150 163-314 (330)
126 PF04342 DUF486: Protein of un 57.3 74 0.0016 24.0 6.9 45 96-146 59-104 (108)
127 PF03547 Mem_trans: Membrane t 56.3 1.8E+02 0.0038 27.3 11.7 7 230-236 41-47 (385)
128 COG3169 Uncharacterized protei 54.2 21 0.00046 26.3 3.6 31 294-324 84-114 (116)
129 PRK13108 prolipoprotein diacyl 53.6 2.2E+02 0.0049 27.7 15.9 26 305-330 254-279 (460)
130 COG3247 HdeD Uncharacterized c 53.4 1.4E+02 0.003 25.2 10.4 62 260-324 111-176 (185)
131 PF15102 TMEM154: TMEM154 prot 52.6 15 0.00032 29.4 2.8 24 310-333 66-89 (146)
132 PF15108 TMEM37: Voltage-depen 51.7 82 0.0018 25.5 6.8 76 135-231 92-169 (184)
133 PF10951 DUF2776: Protein of u 48.2 2.1E+02 0.0046 25.9 10.7 124 105-236 80-210 (347)
134 PF03595 SLAC1: Voltage-depend 48.1 1.9E+02 0.0041 26.5 10.0 77 135-235 7-91 (330)
135 PF06166 DUF979: Protein of un 47.5 2.2E+02 0.0048 25.9 11.0 77 214-290 118-195 (308)
136 PF07168 Ureide_permease: Urei 44.7 9 0.00019 34.6 0.6 131 192-324 2-145 (336)
137 COG4657 RnfA Predicted NADH:ub 40.9 1.6E+02 0.0035 24.1 7.0 51 184-234 130-185 (193)
138 COG3086 RseC Positive regulato 40.5 9 0.00019 30.5 -0.1 26 275-300 70-95 (150)
139 PF08507 COPI_assoc: COPI asso 35.1 29 0.00064 27.5 2.1 13 310-322 90-102 (136)
140 PF04550 Phage_holin_2: Phage 34.6 1.4E+02 0.003 21.7 5.1 24 188-211 63-86 (89)
141 PF06123 CreD: Inner membrane 33.2 4.6E+02 0.0099 25.4 13.0 26 186-211 351-376 (430)
142 TIGR02865 spore_II_E stage II 32.8 6.1E+02 0.013 26.7 13.5 44 99-148 11-54 (764)
143 COG2246 Predicted membrane pro 32.1 1.7E+02 0.0037 23.3 6.0 60 66-129 8-69 (139)
144 PF15345 TMEM51: Transmembrane 31.7 43 0.00093 29.0 2.6 23 308-330 9-31 (233)
145 PF00689 Cation_ATPase_C: Cati 30.5 3E+02 0.0065 22.4 10.7 116 34-149 4-143 (182)
146 PRK11715 inner membrane protei 30.5 5.1E+02 0.011 25.1 13.1 26 186-211 357-382 (436)
147 COG2917 Intracellular septatio 29.1 2.7E+02 0.0059 23.1 6.6 58 87-150 11-68 (180)
148 PF11361 DUF3159: Protein of u 29.0 1.7E+02 0.0036 24.7 5.7 43 100-149 28-70 (187)
149 PF01102 Glycophorin_A: Glycop 28.7 31 0.00068 26.8 1.2 17 310-326 74-90 (122)
150 PRK10666 ammonium transporter; 26.8 5.9E+02 0.013 24.6 17.4 24 72-95 220-243 (428)
151 PF05961 Chordopox_A13L: Chord 26.7 41 0.0009 22.9 1.3 20 310-329 7-26 (68)
152 PF09656 PGPGW: Putative trans 26.7 1.9E+02 0.0041 18.9 4.9 44 135-211 6-49 (53)
153 PF10754 DUF2569: Protein of u 26.5 3.4E+02 0.0073 21.7 7.4 30 182-211 117-146 (149)
154 PF08693 SKG6: Transmembrane a 24.6 52 0.0011 20.0 1.4 18 311-328 21-38 (40)
155 COG2271 UhpC Sugar phosphate p 22.7 3.8E+02 0.0082 26.0 7.3 125 195-330 74-210 (448)
156 PRK10435 cadB lysine/cadaverin 22.1 5.6E+02 0.012 24.5 8.8 81 251-333 350-431 (435)
157 COG4854 Predicted membrane pro 21.8 2.7E+02 0.006 21.2 5.0 51 133-211 73-123 (126)
158 PLN00028 nitrate transmembrane 21.5 7.2E+02 0.016 24.0 9.6 14 310-323 417-430 (476)
159 PRK09412 anaerobic C4-dicarbox 20.8 7.7E+02 0.017 23.8 9.9 35 111-153 6-40 (433)
160 PRK10263 DNA translocase FtsK; 20.7 1.2E+03 0.027 26.2 12.8 18 132-149 22-39 (1355)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=9e-37 Score=282.45 Aligned_cols=319 Identities=29% Similarity=0.588 Sum_probs=250.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCCCHHHHHHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER-KQRPKPSFAVMAKIFVLALLGA 82 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 82 (359)
|+.+.+..++...+.++...++.|.+.+.|++|..+.++|+.++++++.++...++| +.+++.+++++..+.+.|+++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g- 88 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG- 88 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence 557889999999999999999999999999999999999999999999999876544 333445678889999999999
Q ss_pred HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhc------ccccccccccccccchhHHHHHHHHHHHhhhccCcc
Q 018219 83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLG------MEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYL 156 (359)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~------~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~ 156 (359)
..++.+++.|++|++++.++++.++.|+++++++++++ +||+++++ ++|++++++|+.++...++...
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~~ 162 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPRV 162 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCccc
Confidence 78888999999999999999999999999999999994 67766666 9999999999999875443211
Q ss_pred cccccccccccccCCCccc-ccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 018219 157 FKSVVEKPLINIYNNNADH-LRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLAL 235 (359)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (359)
..+.. ++..|...+. ....+..+...|+++++.++++|++|++.+|+..++++++...+.+++.++.+...+...
T Consensus 163 ~~~~~----~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l 238 (358)
T PLN00411 163 FVASS----PPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGL 238 (358)
T ss_pred ccccc----cccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000000 001122345679999999999999999999999888766667777888877777766666
Q ss_pred HhcC-CCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHH
Q 018219 236 FFGR-NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAF 314 (359)
Q Consensus 236 ~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~ 314 (359)
..++ +...|..........+++.++. +.++|.+|++++++.+|++++.+.+++|+++++++++++||++++.+++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~ 317 (358)
T PLN00411 239 VVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI 317 (358)
T ss_pred HHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 5443 2223322122234457777755 5689999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhheeeeccCCCCccC
Q 018219 315 FIVAGLYCVLWGKRKDSLAA 334 (359)
Q Consensus 315 li~~gv~l~~~~~~~~~~~~ 334 (359)
+|++|+++..+.++++.|++
T Consensus 318 LIl~Gv~l~~~~~~~~~~~~ 337 (358)
T PLN00411 318 LITLGFYAVMWGKANEEKDQ 337 (358)
T ss_pred HHHHHHHHHHhhhhhhhhhc
Confidence 99999999987766654443
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=4e-32 Score=247.44 Aligned_cols=278 Identities=18% Similarity=0.187 Sum_probs=232.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018219 9 YMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINV 88 (359)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 88 (359)
+++.+...++||.+++++|...+ +++|.+++++|+.++.++++++...++ ++ ..+++++......|.++...++.+
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~--~~~~~~~~~~~~~g~~~~~~~~~~ 85 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRG-HP--LPTLRQWLNAALIGLLLLAVGNGM 85 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhC-CC--CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 56678889999999999999888 599999999999999999888865432 22 235678888888998876788889
Q ss_pred HHHHh-hccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccccccc
Q 018219 89 YYIGM-DYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLIN 167 (359)
Q Consensus 89 ~~~al-~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 167 (359)
++.+. ++++++.++++.++.|+++++++++ +|||+++++ ++|++++++|+.++... +. .
T Consensus 86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~-~~-~----------- 145 (292)
T PRK11272 86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSG-GN-L----------- 145 (292)
T ss_pred HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcC-cc-c-----------
Confidence 99999 9999999999999999999999986 699999998 99999999999988621 11 1
Q ss_pred ccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018219 168 IYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247 (359)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
.....|++++++++++||.|.+..|+..++ ++...+.+++..+.+...+.....+.+... ..
T Consensus 146 --------------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 207 (292)
T PRK11272 146 --------------SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTA--LP 207 (292)
T ss_pred --------------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccc--cC
Confidence 112479999999999999999999997644 345667788888888777776543322111 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219 248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 248 ~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 327 (359)
+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.+
T Consensus 208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33578899999999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred C
Q 018219 328 R 328 (359)
Q Consensus 328 ~ 328 (359)
+
T Consensus 288 ~ 288 (292)
T PRK11272 288 Y 288 (292)
T ss_pred h
Confidence 4
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=1.2e-31 Score=244.99 Aligned_cols=280 Identities=15% Similarity=0.171 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219 8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN 87 (359)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (359)
..++.++++++||.+++++|...++ ++|..++++|+.++++.+.++.. +++ .++ ......|.+.......
T Consensus 5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~~---~~~---~~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RPK---VPL---NLLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CCC---Cch---HHHHHHHHHHHHHHHH
Confidence 3467889999999999999999985 99999999999998776655431 111 112 2344456655456666
Q ss_pred HHHHHhhc-cCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccc
Q 018219 88 VYYIGMDY-VSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLI 166 (359)
Q Consensus 88 ~~~~al~~-~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 166 (359)
+++.+++| .+++.++++.++.|+++.+++++++|||+++++ ++|++++++|+.++.. +...+
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~--~~~~~--------- 137 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIE--DSLNG--------- 137 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcc--ccCCC---------
Confidence 78889998 588999999999999999999999999999999 9999999999998872 11111
Q ss_pred cccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCc--hhHHHHHHHHHHHHHHHHHHHhcCCC---
Q 018219 167 NIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAP--LSMNTLICFFASLQTSFLALFFGRNP--- 241 (359)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--- 241 (359)
......|+++++.++++|+.|.++.|+..++.+++ .....+....+.+.........+.+.
T Consensus 138 --------------~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (299)
T PRK11453 138 --------------QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI 203 (299)
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh
Confidence 11224799999999999999999999987654332 23344444444443333333333211
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhh
Q 018219 242 TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLY 321 (359)
Q Consensus 242 ~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~ 321 (359)
..+...+...|..++++|+++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|++
T Consensus 204 ~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~ 283 (299)
T PRK11453 204 HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLY 283 (299)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHH
Confidence 11112233478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccC
Q 018219 322 CVLWGKR 328 (359)
Q Consensus 322 l~~~~~~ 328 (359)
+..+.++
T Consensus 284 l~~~~~~ 290 (299)
T PRK11453 284 INVFGLR 290 (299)
T ss_pred HHhcchh
Confidence 8876654
No 4
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=7.2e-31 Score=239.18 Aligned_cols=280 Identities=13% Similarity=0.100 Sum_probs=225.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGAT 83 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 83 (359)
++.+++.+++++.++|+.++.+.|+..++ ++|.+++++|++++++++.++... ++ ++.+++++...+..|.+. .
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~ 82 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-G 82 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-H
Confidence 67899999999999999999999999996 999999999999999888776432 11 124568888888888876 8
Q ss_pred HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccc
Q 018219 84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEK 163 (359)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~ 163 (359)
..+.+++++++|+|++.++++.++.|+++.+++. |+.. + ..++.++++|+.++.. .+...+
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~-~~~~~~------ 143 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLP-LGQDVS------ 143 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeee-cCCCcc------
Confidence 8889999999999999999999999999998873 4432 2 5667788999988752 111111
Q ss_pred ccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 018219 164 PLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTI 243 (359)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (359)
.....|+++++.++++|+.|.+..|+..++. ++... .+....+.++..+.....+. .
T Consensus 144 ------------------~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~---~ 200 (293)
T PRK10532 144 ------------------HVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG---E 200 (293)
T ss_pred ------------------cCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC---c
Confidence 1124799999999999999999999998774 55555 45666667666666654321 1
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219 244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV 323 (359)
Q Consensus 244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 323 (359)
.. .+...|..++++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++..
T Consensus 201 ~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 201 AL-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 11 12235666789999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeccCCCCc
Q 018219 324 LWGKRKDSL 332 (359)
Q Consensus 324 ~~~~~~~~~ 332 (359)
.+..+++.|
T Consensus 280 ~~~~~~~~~ 288 (293)
T PRK10532 280 TLTIRREPK 288 (293)
T ss_pred HhcCCCCCC
Confidence 766554433
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=1.8e-31 Score=243.42 Aligned_cols=285 Identities=12% Similarity=0.025 Sum_probs=215.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018219 5 AYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATI 84 (359)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 84 (359)
+.+++++++++.++||.+++..|...+. ++|..+.++|+.++.+++.++.. +++.+ +++++..+.+.+....
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~~----~~~~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRLR----QFPKRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---ccccc----cccHHHHHHHhHHHHH
Confidence 4677889999999999999999999985 99999999999999988877631 11111 1222334455555578
Q ss_pred HHHHHHHHhhc----cCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccc
Q 018219 85 HINVYYIGMDY----VSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSV 160 (359)
Q Consensus 85 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~ 160 (359)
++.+++.+++| .++.+++++.++.|+++++++++++|||+++++ ++|++++++|++++...+ ...+
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~-~~~~--- 143 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGD-NGLS--- 143 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCC-ccch---
Confidence 88888888765 577888899999999999999999999999998 999999999999987321 1111
Q ss_pred cccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC
Q 018219 161 VEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRN 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (359)
. ++ ..++......|+++++.++++||.|+++.|+..++. ++.... ...+.+...+.....+ +
T Consensus 144 ---~---------~~-~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~---~~~~~~~l~~~~~~~~-~ 205 (295)
T PRK11689 144 ---L---------AE-LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLF---FILTALALWIKYFLSP-Q 205 (295)
T ss_pred ---h---------hh-hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHH---HHHHHHHHHHHHHHhc-C
Confidence 0 00 000111234699999999999999999999987764 555432 2233333333333222 1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhh
Q 018219 241 PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGL 320 (359)
Q Consensus 241 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv 320 (359)
. ... .+...|..+++.+ ++++++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+
T Consensus 206 ~-~~~-~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv 282 (295)
T PRK11689 206 P-AMV-FSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGS 282 (295)
T ss_pred c-ccc-CCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhH
Confidence 1 111 2234677777877 578999999999999999999999999999999999999999999999999999999999
Q ss_pred heeeeccC
Q 018219 321 YCVLWGKR 328 (359)
Q Consensus 321 ~l~~~~~~ 328 (359)
.+....++
T Consensus 283 ~~~~~~~~ 290 (295)
T PRK11689 283 LLCWLATR 290 (295)
T ss_pred HHHhhhHh
Confidence 88765443
No 6
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=1.8e-30 Score=233.05 Aligned_cols=259 Identities=22% Similarity=0.368 Sum_probs=219.7
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018219 19 FAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSP 98 (359)
Q Consensus 19 ~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 98 (359)
||.+++..|...+...|+....+.|+..+.+++.++... + .+++++.+....|.++..+++.+++.|++|+++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 899999999988766899999999999998888776443 2 235677788888888889999999999999999
Q ss_pred hhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccc
Q 018219 99 TVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRH 178 (359)
Q Consensus 99 ~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
++++++.++.|+++++++++++|||+++++ ++|+.++++|+.++.. ++. .
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~~--~--------------------- 123 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DGN--L--------------------- 123 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CCc--c---------------------
Confidence 999999999999999999999999999998 9999999999999862 211 1
Q ss_pred cCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHH
Q 018219 179 HGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMY 257 (359)
Q Consensus 179 ~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 257 (359)
.....|+.+++.++++|+.+.+..|+..++.+ ++.....+.+..+.++..+.....+++. .. +...|..+++
T Consensus 124 ---~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~ 196 (260)
T TIGR00950 124 ---SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLY 196 (260)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHH
Confidence 12357999999999999999999999987643 2334555778888888877776543221 11 3347778889
Q ss_pred HHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhh
Q 018219 258 CGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLY 321 (359)
Q Consensus 258 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~ 321 (359)
.+++++.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|++
T Consensus 197 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 197 LGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999863
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.98 E-value=1.1e-30 Score=238.24 Aligned_cols=281 Identities=9% Similarity=0.037 Sum_probs=209.6
Q ss_pred CCC-cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCC--CC-CCHHHHHHHHH
Q 018219 1 MNM-KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQR--PK-PSFAVMAKIFV 76 (359)
Q Consensus 1 M~~-~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~ 76 (359)
|+| ++.+|.++++++.++||..+++.|.. + +++|.+++++|+.++.+++.++...+++++. ++ .+++++.. ..
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence 555 56789999999999999999999975 5 4999999999999999888777554322111 00 12344333 33
Q ss_pred HHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcc
Q 018219 77 LALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYL 156 (359)
Q Consensus 77 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~ 156 (359)
.+.++...++.++++|++++|+++++++.++.|+++++++++++|||+++++ ++|++++++|+.++...++
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~--- 148 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG--- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---
Confidence 6666668999999999999999999999999999999999999999999999 9999999999999863211
Q ss_pred cccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHH
Q 018219 157 FKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLAL 235 (359)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (359)
+ . ..+++.++++|+.|.+..|+..++.. +....+.+....+.+...+.
T Consensus 149 ~------------------------~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 197 (296)
T PRK15430 149 S------------------------L-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI-- 197 (296)
T ss_pred C------------------------c-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH--
Confidence 1 0 14688899999999999988754311 11222333333333222111
Q ss_pred HhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHH
Q 018219 236 FFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFF 315 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~l 315 (359)
.......+...+...+..+...| +.+.++|.++++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++
T Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~g-~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~l 275 (296)
T PRK15430 198 -ADSSTSHMGQNPMSLNLLLIAAG-IVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAF 275 (296)
T ss_pred -ccCCcccccCCcHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 11111111111111233444445 4678999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhheeeec
Q 018219 316 IVAGLYCVLWG 326 (359)
Q Consensus 316 i~~gv~l~~~~ 326 (359)
|++|+.+....
T Consensus 276 I~~~~~v~~~~ 286 (296)
T PRK15430 276 IWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHH
Confidence 99888777644
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=5.2e-29 Score=228.23 Aligned_cols=283 Identities=16% Similarity=0.099 Sum_probs=219.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018219 11 AIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYY 90 (359)
Q Consensus 11 ~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 90 (359)
+..+.-.+-....+..|..++.-.+|..++++|+.++.+.+.+.... ..+++++.++++++.++..|++. ..+..+.+
T Consensus 6 ~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~ 83 (302)
T TIGR00817 6 LFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKRLKISSALLKLLLPVAIVH-TIGHVTSN 83 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 34444444455567889999853669999999999987776555211 22334457789999999999998 99999999
Q ss_pred HHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccC
Q 018219 91 IGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYN 170 (359)
Q Consensus 91 ~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
.+++|++++.++++.++.|+++++++++++|||+++++ ++|++++++|+.+.. .++ .
T Consensus 84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~--~~~-~-------------- 140 (302)
T TIGR00817 84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS--DTE-L-------------- 140 (302)
T ss_pred HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc--CCc-c--------------
Confidence 99999999999999999999999999999999999998 999999999998764 111 1
Q ss_pred CCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhh--hCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc-c--cc
Q 018219 171 NNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFK--EYPAPLSMNTLICFFASLQTSFLALFFGRNPT-I--WK 245 (359)
Q Consensus 171 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~ 245 (359)
+....|++++++++++|++|.+..|+..+ +. +|...+.+++..+.+.+.|.....+.... . +.
T Consensus 141 -----------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 208 (302)
T TIGR00817 141 -----------SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFM 208 (302)
T ss_pred -----------cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHH
Confidence 11246999999999999999999999887 53 67899999999999999988776543111 0 00
Q ss_pred c-----chhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhh
Q 018219 246 L-----DWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGL 320 (359)
Q Consensus 246 ~-----~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv 320 (359)
. .....+......+..+....+.+++.++++.++++.++...++|+++++++++++||+++..+++|++++++|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv 288 (302)
T TIGR00817 209 QAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGV 288 (302)
T ss_pred HhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHH
Confidence 0 00011222223332233333446668999999999999999999999999999999999999999999999999
Q ss_pred heeeeccCCC
Q 018219 321 YCVLWGKRKD 330 (359)
Q Consensus 321 ~l~~~~~~~~ 330 (359)
.++.+.|.++
T Consensus 289 ~l~~~~k~~~ 298 (302)
T TIGR00817 289 FLYSRVKAQK 298 (302)
T ss_pred HHHHHHhccC
Confidence 9998655433
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.8e-27 Score=215.94 Aligned_cols=301 Identities=16% Similarity=0.183 Sum_probs=243.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccC-CCCCCCHHHHHHHHHHHHHHH
Q 018219 5 AYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERK-QRPKPSFAVMAKIFVLALLGA 82 (359)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 82 (359)
..+..++.-+.+++-..+...+..+.+.|.+ |....++.+..-.++..+....++++ ++.+..+++|+++++.+++-
T Consensus 11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D- 89 (334)
T PF06027_consen 11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD- 89 (334)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-
Confidence 4566777788888899999999988776666 88888888888888887776665432 33334457888888899999
Q ss_pred HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccc
Q 018219 83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVE 162 (359)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~ 162 (359)
+.++.+.+.|++|++.+.++++.+++.+++++++++++|+|.++.+ ++|+++++.|+.++...+....+
T Consensus 90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~----- 158 (334)
T PF06027_consen 90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGS----- 158 (334)
T ss_pred HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccccc-----
Confidence 9999999999999999999999999999999999999999999999 99999999999998754422111
Q ss_pred cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCC-
Q 018219 163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNP- 241 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (359)
+..+..+..+|+++++.++++||+++++.++..++. ++........+++.++..+.....+.+.
T Consensus 159 --------------~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i 223 (334)
T PF06027_consen 159 --------------DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGI 223 (334)
T ss_pred --------------cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhh
Confidence 012345678999999999999999999999999984 5678888888888888888877766532
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhh
Q 018219 242 TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLY 321 (359)
Q Consensus 242 ~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~ 321 (359)
...++.+. .+..++ ...++...-|.+....++..+|+...+-..+..+++++++++++|+.+++..++|.++|+.|.+
T Consensus 224 ~~~~w~~~-~~~~~v-~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~v 301 (334)
T PF06027_consen 224 ESIHWTSQ-VIGLLV-GYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFV 301 (334)
T ss_pred hccCCChh-hHHHHH-HHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhh
Confidence 22222222 233222 2235667788888899999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCccC
Q 018219 322 CVLWGKRKDSLAA 334 (359)
Q Consensus 322 l~~~~~~~~~~~~ 334 (359)
++...+++.+++.
T Consensus 302 vy~~~~~~~~~~~ 314 (334)
T PF06027_consen 302 VYNLAESPEEEAR 314 (334)
T ss_pred eEEccCCcccccc
Confidence 9998776554443
No 10
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=2.4e-27 Score=214.91 Aligned_cols=275 Identities=17% Similarity=0.173 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018219 8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLE-RKQRPKPSFAVMAKIFVLALLGATIHI 86 (359)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (359)
.+++.++++++|+..++.+|...++ -++ ..+++.....+.+.++...+. ++.++..+++ ++.....+.++...++
T Consensus 2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 2 ALTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYF 77 (281)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHH
Confidence 3577899999999999999966553 344 347777777777777765532 2233333334 4444444555559999
Q ss_pred HHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccc
Q 018219 87 NVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLI 166 (359)
Q Consensus 87 ~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 166 (359)
.+++.|+++.+++.++++.++.|+++++++++++|||+++++ ++|+.+++.|+.++...+ ..
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~---~~--------- 139 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSR---FA--------- 139 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhccc---cc---------
Confidence 999999999999999999999999999999999999999999 999999999999886311 11
Q ss_pred cccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchh---HHHHHHHHHHHHHHHHHHHhcCCCcc
Q 018219 167 NIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLS---MNTLICFFASLQTSFLALFFGRNPTI 243 (359)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (359)
.....|+.+++.++++|+.|.+..|+..++.++... ...+.+....+...+.....+. ..
T Consensus 140 ---------------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 202 (281)
T TIGR03340 140 ---------------QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG--RS 202 (281)
T ss_pred ---------------ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc--cc
Confidence 112357889999999999999998886544322111 1222222221111111111111 11
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhe
Q 018219 244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYC 322 (359)
Q Consensus 244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l 322 (359)
+.. ....+..+.+.+.+++.++|.+|++++++.+++.++.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus 203 ~~~-~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 203 MFP-YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 111 122455667777788999999999999999999999999999999999999999999999999999999999875
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=4.5e-26 Score=211.98 Aligned_cols=284 Identities=18% Similarity=0.158 Sum_probs=222.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCC--CHHHHHHHHHHHHHH
Q 018219 5 AYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKP--SFAVMAKIFVLALLG 81 (359)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 81 (359)
+.+...+.+..-.+-.......|..++. ++ |..++++|++++.++........ .+++++. .++++...+..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 3455666666667777788899999986 99 99999999999987765554332 2222333 346788899999999
Q ss_pred HHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccc
Q 018219 82 ATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVV 161 (359)
Q Consensus 82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~ 161 (359)
...+...+.|+++++++.++++.++.|+++++++++++|||+++++ +++++++++|+++.+. + +.+
T Consensus 125 -~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~--~-~~~---- 190 (350)
T PTZ00343 125 -LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV--K-ELH---- 190 (350)
T ss_pred -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec--c-cch----
Confidence 5556667899999999999999999999999999999999999998 9999999999999872 1 111
Q ss_pred ccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC------CchhHHHHHHHHHHHHHHHHHH
Q 018219 162 EKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP------APLSMNTLICFFASLQTSFLAL 235 (359)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 235 (359)
....|++++++|+++++.++++.|+..++.+ ++.....++...+.++++|...
T Consensus 191 ---------------------~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~ 249 (350)
T PTZ00343 191 ---------------------FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVL 249 (350)
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1257999999999999999999999887532 3444566668889999998887
Q ss_pred HhcCCC--cccc----cchhhHHHHHHHHHHHHHHHHHHHHHH----HHhccCcceeeechhhHHHHHHHHHHHHhcCCC
Q 018219 236 FFGRNP--TIWK----LDWNVQFLTVMYCGVLNSALVYYLQTW----CISVKGPVFTAMFIPVQLVIVALFSIIAFAERL 305 (359)
Q Consensus 236 ~~~~~~--~~~~----~~~~~~~~~l~~~g~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~ 305 (359)
+.+... ..+. ......+..+.+ .++.+++.+++++. +++++++.+.++...++|+++++++++++||++
T Consensus 250 ~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~l 328 (350)
T PTZ00343 250 FFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQV 328 (350)
T ss_pred HHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCC
Confidence 554311 0110 001112233344 34667888888885 999999999999999999999999999999999
Q ss_pred cchhhHhHHHHhhhhheeeec
Q 018219 306 HLSSLIGAFFIVAGLYCVLWG 326 (359)
Q Consensus 306 ~~~~~~G~~li~~gv~l~~~~ 326 (359)
++.+++|++++++|++++.+-
T Consensus 329 t~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 329 TLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred chHhHHHHHHHHHHHHHHhhc
Confidence 999999999999999988654
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=2.4e-25 Score=199.26 Aligned_cols=248 Identities=9% Similarity=0.014 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCC-----CCCCCHHH-HHHHHHHHHH
Q 018219 7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ-----RPKPSFAV-MAKIFVLALL 80 (359)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~ 80 (359)
+|++++++++++||.++++.|. .+ +++|.+++++|++++.+++.++...+++++ .++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4889999999999999999998 55 499999999999999988877654433211 11122233 4456667777
Q ss_pred HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccc
Q 018219 81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSV 160 (359)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~ 160 (359)
. ..++.+++.|++++++++++++.++.|+++++++++++|||+++++ +++++++++|++++...+ .+
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~---~~--- 146 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLK---GS--- 146 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHc---CC---
Confidence 6 9999999999999999999999999999999999999999999999 999999999999886321 11
Q ss_pred cccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCC
Q 018219 161 VEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRN 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (359)
. . .+++.++++|+.|.+..|+..++ +. ...... .........+.....+.
T Consensus 147 ---------------------~----~-~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~- 196 (256)
T TIGR00688 147 ---------------------L----P-WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYLLQTDF- 196 (256)
T ss_pred ---------------------c----h-HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHHHHhcc-
Confidence 0 0 35788999999999999997653 22 222211 11222222212111111
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHH
Q 018219 241 PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIA 300 (359)
Q Consensus 241 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~ 300 (359)
.......+...|..+.+.|++ +.++|.++++++|+.+++.++.+.+++|+++.+++.+.
T Consensus 197 ~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 197 ATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred CcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 111111222378888888865 88999999999999999999999999999999999754
No 13
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.93 E-value=8.7e-24 Score=177.86 Aligned_cols=275 Identities=16% Similarity=0.103 Sum_probs=229.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219 8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN 87 (359)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (359)
+++.++.+.+.--....+.|.+.+. +.+..++.+|..++++++.++...+ +.++++++|......|+.. ...|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW----RRRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH----HhccChhhhHHHHHHHHHH-HHHHH
Confidence 5788888888888888899999996 9999999999999999998885443 3447889999999999998 99999
Q ss_pred HHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccccccc
Q 018219 88 VYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLIN 167 (359)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 167 (359)
+||.+++.+|.+.+..+.++.|+.+++++. -+.++ .+.+.+++.|+.++.. .+...
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s------Rr~~d------~vwvaLAvlGi~lL~p-~~~~~----------- 142 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS------RRLRD------FVWVALAVLGIWLLLP-LGQSV----------- 142 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc------cchhh------HHHHHHHHHHHHhhee-ccCCc-----------
Confidence 999999999999999999999999888862 12233 8888899999999872 32221
Q ss_pred ccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 018219 168 IYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLD 247 (359)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
...+..|..+++.++.||+.|.+..+|..+.. +...-+..-+.+++++.+|+...... .. ..
T Consensus 143 -------------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag--~~--l~ 204 (292)
T COG5006 143 -------------WSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAG--PA--LF 204 (292)
T ss_pred -------------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcc--hh--hc
Confidence 13346899999999999999999999998763 44667788889999999999984332 11 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219 248 WNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 248 ~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 327 (359)
.+.....-+..+++.+.++|.+-+.++++.+....+.+..+||.++.+.|++++||++|+.||.|++.|+.+..-..+..
T Consensus 205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence 23356666788899999999999999999999999999999999999999999999999999999999999988666554
Q ss_pred CCC
Q 018219 328 RKD 330 (359)
Q Consensus 328 ~~~ 330 (359)
+|+
T Consensus 285 ~~~ 287 (292)
T COG5006 285 RKP 287 (292)
T ss_pred CCC
Confidence 443
No 14
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=1.6e-23 Score=190.54 Aligned_cols=286 Identities=24% Similarity=0.343 Sum_probs=219.9
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHH
Q 018219 1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALL 80 (359)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 80 (359)
|+++...+..+.++..+.|+......|...+...++....+.|...+.+...+..... +...++.. +++....+.+.+
T Consensus 1 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~ 78 (292)
T COG0697 1 MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE-PRGLRPAL-RPWLLLLLLALL 78 (292)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh-cccccccc-cchHHHHHHHHH
Confidence 3456677888999999999999999998877436677777779998888844343221 11111111 224456666666
Q ss_pred HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHH-HhcccccccccccccccchhHHHHHHHHHHHhhhccCccccc
Q 018219 81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAF-LLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKS 159 (359)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~-l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~ 159 (359)
....++.+++.++++++++.++++.++.|+++.++++ ++++||+++++ ++++.+++.|++++...+.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~~~-- 150 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGGGI-- 150 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcchh--
Confidence 6699999999999999999999999999999999997 77799999998 99999999999999732221111
Q ss_pred ccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHH-HHHHHHHHHHHHHHHHhc
Q 018219 160 VVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNT-LICFFASLQTSFLALFFG 238 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (359)
. ...|+.+++.++++++.+.+..|+.. + .++..... +..........+... .
T Consensus 151 ----------------------~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~ 203 (292)
T COG0697 151 ----------------------L-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--S 203 (292)
T ss_pred ----------------------H-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--c
Confidence 1 46899999999999999999999988 4 34455554 333312222222221 1
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhh
Q 018219 239 RNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVA 318 (359)
Q Consensus 239 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~ 318 (359)
. .. .......|..+.+.|++.+++++.++.+++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.
T Consensus 204 ~-~~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~ 280 (292)
T COG0697 204 G-FG--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVL 280 (292)
T ss_pred c-cc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 1 11 12233478888999988888999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeeec
Q 018219 319 GLYCVLWG 326 (359)
Q Consensus 319 gv~l~~~~ 326 (359)
|+.+...+
T Consensus 281 g~~l~~~~ 288 (292)
T COG0697 281 GVLLASLR 288 (292)
T ss_pred HHHHHhcc
Confidence 99998765
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.91 E-value=3.5e-22 Score=172.86 Aligned_cols=283 Identities=14% Similarity=0.124 Sum_probs=226.7
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCC-CC--CCCHHHHHHHHHH
Q 018219 1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQ-RP--KPSFAVMAKIFVL 77 (359)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~-~~--~~~~~~~~~~~~~ 77 (359)
|+++..+|+++.+.+.++||..+...|. ++. .++.++...|..-+..++..+....++.+ .. .-+++.+....+.
T Consensus 1 ~~~~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~ 78 (293)
T COG2962 1 MAKDSRKGILLALLAYLLWGLLPLYFKL-LEP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALT 78 (293)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHH-Hcc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHH
Confidence 6667789999999999999999999995 554 99999999999999888777765543321 11 1234666777777
Q ss_pred HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccc
Q 018219 78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLF 157 (359)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~ 157 (359)
+.+- ..++..|.+|......-++++=++..|++.++++.+++|||+++.| +++++++.+|+....+-.|+ .+
T Consensus 79 a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~-lp 150 (293)
T COG2962 79 ALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS-LP 150 (293)
T ss_pred HHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC-Cc
Confidence 7776 9999999999999999999999999999999999999999999999 99999999999998753332 22
Q ss_pred ccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHh
Q 018219 158 KSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFF 237 (359)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
..++.-++.|+.|....|+.. - ++.+-....+..-....+...++.
T Consensus 151 -------------------------------wval~la~sf~~Ygl~RK~~~-v--~a~~g~~lE~l~l~p~al~yl~~l 196 (293)
T COG2962 151 -------------------------------WVALALALSFGLYGLLRKKLK-V--DALTGLTLETLLLLPVALIYLLFL 196 (293)
T ss_pred -------------------------------HHHHHHHHHHHHHHHHHHhcC-C--chHHhHHHHHHHHhHHHHHHHHHH
Confidence 356666899999999866543 2 335555555555555555555555
Q ss_pred cCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHh
Q 018219 238 GRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIV 317 (359)
Q Consensus 238 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~ 317 (359)
+.........++..+..+...| ..|.++..++..+.|+++-+..+.++|.+|..-.+++.+++||+++..+++..++|.
T Consensus 197 ~~~~~~~~~~~~~~~~LLv~aG-~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW 275 (293)
T COG2962 197 ADSGQFLQQNANSLWLLLVLAG-LVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIW 275 (293)
T ss_pred hcCchhhhcCCchHHHHHHHhh-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 4433212223444777888888 557899999999999999999999999999999999999999999999999999999
Q ss_pred hhhheeeeccC
Q 018219 318 AGLYCVLWGKR 328 (359)
Q Consensus 318 ~gv~l~~~~~~ 328 (359)
.|+.++..+.-
T Consensus 276 ~aL~l~~~d~l 286 (293)
T COG2962 276 LALALFSIDGL 286 (293)
T ss_pred HHHHHHHHHHH
Confidence 99999876543
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.90 E-value=4.4e-25 Score=186.77 Aligned_cols=294 Identities=16% Similarity=0.192 Sum_probs=221.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGAT 83 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 83 (359)
+..+|.++..++ ..+.++.+.++..++ .+|.+..--|++.-.++..+...+.+.... .+.....+++++|+.| .
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~ 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-F 108 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-h
Confidence 345677788888 455555555554554 899999999987777777666555332221 1223344678899999 8
Q ss_pred HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccccc
Q 018219 84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEK 163 (359)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~ 163 (359)
.+..+.|+|++|.+.++++++...+|.++.++++.++||+.++.+ .++..+.+.|++++. +.+...
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv--RPpFlF------ 174 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV--RPPFLF------ 174 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe--cCCccc------
Confidence 888899999999999999999999999999999999999999999 999999999999997 333221
Q ss_pred ccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 018219 164 PLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTI 243 (359)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (359)
..+.+.+ +.+.......|...++.+.++-|--.++.|++.++. |-.....|..+++.+..+......+ ...
T Consensus 175 --G~~t~g~----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig--~~~ 245 (346)
T KOG4510|consen 175 --GDTTEGE----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIG--AVQ 245 (346)
T ss_pred --CCCcccc----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhcc--cee
Confidence 0000000 011234455778889999999888888889998885 4354555666666666655444322 234
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219 244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV 323 (359)
Q Consensus 244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 323 (359)
++.... +|+.+..+|++ +++++.+...++|+..+..++++.+++.+++.+++.++|||.|+++.|.|+++++.+.+..
T Consensus 246 lP~cgk-dr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 246 LPHCGK-DRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred cCcccc-ceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 444443 88888889954 6899999999999999999999999999999999999999999999999999999988777
Q ss_pred eeccC
Q 018219 324 LWGKR 328 (359)
Q Consensus 324 ~~~~~ 328 (359)
...|.
T Consensus 324 a~~kw 328 (346)
T KOG4510|consen 324 ALKKW 328 (346)
T ss_pred HHHHH
Confidence 65443
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.88 E-value=9.2e-21 Score=171.99 Aligned_cols=278 Identities=10% Similarity=0.067 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219 8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN 87 (359)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (359)
+++++++++++||...+..|... +.++.++. |..++.+++..+....+.+ . +..++.+...++.|..- ..++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~-~-~~~~~~~~~g~l~G~~w-~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLP-E-FWALSIFLVGLLSGAFW-ALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCC-c-ccccHHHHHHHHHHHHH-Hhhhh
Confidence 57889999999999999999754 58887775 7777777776665543221 1 11234444455556655 89999
Q ss_pred HHHHHhhccCchhhhhhcc-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccc
Q 018219 88 VYYIGMDYVSPTVATALGN-VVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLI 166 (359)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~-~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 166 (359)
+++.+.++++.+.+.++.+ +.+++..+++.+++||+.++++ ...-++|++++++|++++...+ ..+ .
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~--~~~------~-- 142 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSK--DKS------A-- 142 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecc--ccc------c--
Confidence 9999999999999999977 8889999999999999986652 0001788999999988875221 111 0
Q ss_pred cccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHH---HHHHHHHHHHHHhcCCCcc
Q 018219 167 NIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICF---FASLQTSFLALFFGRNPTI 243 (359)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 243 (359)
+ .++..+..+|+++++.++++|+.|.+..|+.. .+|.+....+.. .++++..+... +. .+
T Consensus 143 -----~-----~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~ 205 (290)
T TIGR00776 143 -----G-----IKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGMVIGGIIFNLGHI---LA-KP 205 (290)
T ss_pred -----c-----cccccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHHHHHHHHHHHHHh---cc-cc
Confidence 0 00002346799999999999999999999763 356777444443 33333322221 11 12
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcceeeechhhHHHHHHHHHHHHhcCCCcchhh----HhHHHHhh
Q 018219 244 WKLDWNVQFLTVMYCGVLNSALVYYLQTWCIS-VKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSL----IGAFFIVA 318 (359)
Q Consensus 244 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~----~G~~li~~ 318 (359)
+ .....|..++ .|++ ..+++.+|..+.+ +.+++.++.+...+|+.+.+++++++||..++.|+ +|+++++.
T Consensus 206 ~--~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~ 281 (290)
T TIGR00776 206 L--KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIII 281 (290)
T ss_pred h--HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHH
Confidence 2 2222444444 7877 6999999999999 99999999999999999999999999999999999 99999999
Q ss_pred hhheeee
Q 018219 319 GLYCVLW 325 (359)
Q Consensus 319 gv~l~~~ 325 (359)
|+.+...
T Consensus 282 ~~~l~~~ 288 (290)
T TIGR00776 282 AANILGI 288 (290)
T ss_pred HHHHHhc
Confidence 9887654
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.86 E-value=3.7e-19 Score=162.90 Aligned_cols=266 Identities=18% Similarity=0.207 Sum_probs=210.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219 36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL 115 (359)
Q Consensus 36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il 115 (359)
|..+++.++....+...+.....+ .++.++..+..++..+++. .++..+.+.|++|+|.+...++.+..|++++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~ 107 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMIL 107 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence 889999999998887777655433 1223345566778888888 888899999999999999999999999999999
Q ss_pred HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219 116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH 195 (359)
Q Consensus 116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~ 195 (359)
+.+++|+|.++++ ++++++..+|+++....+..... .......+...|+++.+.+.
T Consensus 108 ~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~------------------~~~~~~~~~~~G~~ll~~sl 163 (303)
T PF08449_consen 108 GVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSS------------------SSNSSSFSSALGIILLLLSL 163 (303)
T ss_pred HHHhcCccccHHH------HHHHHHHHhhHheeeeccccccc------------------ccccccccchhHHHHHHHHH
Confidence 9999999999999 99999999999999854322211 00011122334999999999
Q ss_pred HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHH--hcCCCccc--ccchhhHHHHHHHHHHHHHHHHHHHH
Q 018219 196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALF--FGRNPTIW--KLDWNVQFLTVMYCGVLNSALVYYLQ 270 (359)
Q Consensus 196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~~~l~ 270 (359)
++.+.....+++..++++ ++.....+...++.+...+.... .++....+ ....+..+..++... +++.+++...
T Consensus 164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i 242 (303)
T PF08449_consen 164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFI 242 (303)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999988654 66789999999998888777776 22211111 112222444444444 5667788888
Q ss_pred HHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219 271 TWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 271 ~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
....++.++...+.+..++.+++++++.+++++++++.+|+|+++++.|..++.+.++|+
T Consensus 243 ~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 243 FYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 889999999999999999999999999999999999999999999999999998776654
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.79 E-value=4.3e-18 Score=151.37 Aligned_cols=301 Identities=13% Similarity=0.197 Sum_probs=222.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHHHHH-------hhhccCCCC----------
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERGL--NQLVFVVYRHVIAMLLLGPFA-------YVLERKQRP---------- 64 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~--~p~~~~~~r~~~a~l~l~~~~-------~~~~~~~~~---------- 64 (359)
+...|+.++++..++|=.+.-+++...+.+- .|+..++..-..-.+-+.++. ....|.+..
T Consensus 11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~ 90 (416)
T KOG2765|consen 11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA 90 (416)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence 3578999999999999999999999987533 388777665433333333221 111110000
Q ss_pred --------------------------------------------------CCCH-----------HHH-HHHHHHHHHHH
Q 018219 65 --------------------------------------------------KPSF-----------AVM-AKIFVLALLGA 82 (359)
Q Consensus 65 --------------------------------------------------~~~~-----------~~~-~~~~~~g~~~~ 82 (359)
...+ ++. ...+....+-
T Consensus 91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW- 169 (416)
T KOG2765|consen 91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW- 169 (416)
T ss_pred hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-
Confidence 0011 133 3344555566
Q ss_pred HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccc
Q 018219 83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVE 162 (359)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~ 162 (359)
+++++.+..|+.+++++..+++.+++.+||..++.++.+||+++.. ++++.+++.|++++...+....+
T Consensus 170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~~~~----- 238 (416)
T KOG2765|consen 170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSKQNS----- 238 (416)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEeccccccc-----
Confidence 8999999999999999999999999999999999999999999997 99999999999999743221111
Q ss_pred cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHH---HHHHHHHHHHhcC
Q 018219 163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFA---SLQTSFLALFFGR 239 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 239 (359)
.........|+++++++++.||+|.++.||-..+.+..+.+.-...++| .+++.|..++.+.
T Consensus 239 ---------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~ 303 (416)
T KOG2765|consen 239 ---------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDF 303 (416)
T ss_pred ---------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 1134556799999999999999999999988776433344333333333 4444444443222
Q ss_pred -CCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhh
Q 018219 240 -NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVA 318 (359)
Q Consensus 240 -~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~ 318 (359)
.......+...+...+++.+.+.++++-++|.+|.-..++..+.+-+.++...+++.+.++-+..+++.+++|.+.|++
T Consensus 304 ~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv 383 (416)
T KOG2765|consen 304 FGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFV 383 (416)
T ss_pred hccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 1223333444467778888899999999999999999999999999999999999999998899999999999999999
Q ss_pred hhheeeeccCCCC
Q 018219 319 GLYCVLWGKRKDS 331 (359)
Q Consensus 319 gv~l~~~~~~~~~ 331 (359)
|.+.++.......
T Consensus 384 ~Fv~vn~~~~~~~ 396 (416)
T KOG2765|consen 384 GFVIVNISSENSK 396 (416)
T ss_pred HHhheeccccccc
Confidence 9999987655443
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.73 E-value=9.3e-18 Score=150.75 Aligned_cols=275 Identities=16% Similarity=0.161 Sum_probs=217.6
Q ss_pred HHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018219 21 GSNILMKIALER-GLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSP 98 (359)
Q Consensus 21 ~~~~~~k~~~~~-~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 98 (359)
......|+.++. +++ |..++.++...+.+.......++..+..+..++..+...+..|+.. .++..+.+.++++.++
T Consensus 31 ~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~V 109 (316)
T KOG1441|consen 31 GVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPV 109 (316)
T ss_pred eeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccch
Confidence 344566777762 243 8888888888887777777665444433333557788889999988 9999999999999999
Q ss_pred hhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccc
Q 018219 99 TVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRH 178 (359)
Q Consensus 99 ~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
+..+.+..++|++++++++++.+|+.++.. ++.++....|+.+.+..+ .
T Consensus 110 sF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e-~------------------------ 158 (316)
T KOG1441|consen 110 SFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTE-L------------------------ 158 (316)
T ss_pred hHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeecc-c------------------------
Confidence 999999999999999999999999999998 999999999999887411 1
Q ss_pred cCccchhhhHHHHHHHHHHHHHHHHHHHHHhh--hC-CCchhHHHHHHHHHHHHHH-HHHHHhcCCCc---ccccchhhH
Q 018219 179 HGKENWIKGSALILTSHIALSSWLILQAKVFK--EY-PAPLSMNTLICFFASLQTS-FLALFFGRNPT---IWKLDWNVQ 251 (359)
Q Consensus 179 ~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~ 251 (359)
.-...|.+.+.++.+..+..+++.++..+ +. -++.....++.-++.+.++ |+....+++.. .. ..+...
T Consensus 159 ---~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~-~~~~~~ 234 (316)
T KOG1441|consen 159 ---SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLT-APWFVT 234 (316)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeec-cccchh
Confidence 12358999999999999999999999984 22 2778999999999988888 87776555332 11 011112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCCC
Q 018219 252 FLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDS 331 (359)
Q Consensus 252 ~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~ 331 (359)
...+.+.. ++....+...+..+.+++|.+.++...+.-++.++.++++|+++.++.+..|+++.++|+.++.+.|.+++
T Consensus 235 ~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 235 FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 33333333 44456667778899999999999999999999999999999999999999999999999999988776554
Q ss_pred c
Q 018219 332 L 332 (359)
Q Consensus 332 ~ 332 (359)
+
T Consensus 314 ~ 314 (316)
T KOG1441|consen 314 K 314 (316)
T ss_pred c
Confidence 3
No 21
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.72 E-value=4.6e-18 Score=143.47 Aligned_cols=285 Identities=14% Similarity=0.147 Sum_probs=224.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGA 82 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 82 (359)
+.++++.+.-+-+++-..+...+....+.+.+ |...+|+.+..-+++..+...+|+ + .-...|..+++.++.-
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~----~~~~~~~hYilla~~D- 88 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR-K----YIKAKWRHYILLAFVD- 88 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh-H----HHHHHHHHhhheeEEe-
Confidence 45667777766777777777777776665554 999999999999999999988743 2 2234455688888888
Q ss_pred HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccc
Q 018219 83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVE 162 (359)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~ 162 (359)
+-++++...|.||++....+++-+...+.+.+++|++++.|.++.+ +.|+++|++|++++.+.+-.. +
T Consensus 89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a-g----- 156 (336)
T KOG2766|consen 89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA-G----- 156 (336)
T ss_pred ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc-c-----
Confidence 8888889999999999999999999999999999999999999998 999999999999998543211 1
Q ss_pred cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 018219 163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPT 242 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (359)
...+.++..+|+.+.++++-+||+.++..+.+.++. +...+.....++|+++...-..+..++..
T Consensus 157 --------------d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~~~~~~~ 221 (336)
T KOG2766|consen 157 --------------DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIFERHHVS 221 (336)
T ss_pred --------------cccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhhcccee
Confidence 123566778999999999999999999999999984 66788888899999998887543332323
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhe
Q 018219 243 IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYC 322 (359)
Q Consensus 243 ~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l 322 (359)
..++.+ .....+ ...++.++-|.+.-..+|..+++...+-..++-.+++++ ..||-..+|..++..+.+..|.++
T Consensus 222 tl~w~~--~i~~yl-~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~Glii 296 (336)
T KOG2766|consen 222 TLHWDS--AIFLYL-RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLII 296 (336)
T ss_pred eEeehH--HHHHHH-HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEE
Confidence 332222 111111 134666677777778889999999999999999999998 467777999999999999999999
Q ss_pred eeec
Q 018219 323 VLWG 326 (359)
Q Consensus 323 ~~~~ 326 (359)
+..+
T Consensus 297 Ys~r 300 (336)
T KOG2766|consen 297 YSTR 300 (336)
T ss_pred eecc
Confidence 8433
No 22
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.68 E-value=2.7e-16 Score=119.00 Aligned_cols=135 Identities=16% Similarity=0.234 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC-CCCHHHHHHHHHHHHHHHHHH
Q 018219 7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-KPSFAVMAKIFVLALLGATIH 85 (359)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 85 (359)
...+++++++++||..+++.|..++ ++||...+++|-.+..+.+..+.....+.+.. ..+.|.|..+.+.|+.+ .++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence 4578999999999999999999999 59999999999999999988887765443222 34789999999999888 999
Q ss_pred HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
+.+||.|++...++.+.++-.++|+++++++++++|||++.++ ++|+++..+|+++++
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999 999999999998875
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.68 E-value=8.5e-14 Score=124.41 Aligned_cols=299 Identities=15% Similarity=0.157 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHhhhccC----CCCCC------CHHHHHH
Q 018219 7 IPYMAIIFNQFAFAGSNILMKIALERG---LNQLVFVVYRHVIAMLLLGPFAYVLERK----QRPKP------SFAVMAK 73 (359)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~---~~p~~~~~~r~~~a~l~l~~~~~~~~~~----~~~~~------~~~~~~~ 73 (359)
.-.+.+++..+.++......|+....+ +.|...+++--.+-.++.....+...|+ ..+.+ .+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 456778888999999999999987655 6688888888877777776666655322 11111 3456777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcc
Q 018219 74 IFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRS 153 (359)
Q Consensus 74 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~ 153 (359)
..+-+++. .+.+.+++.++.+.+++..++..++..+.|+++.++++++|++++| |.+.++.++|+.++.....
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence 77788877 7777899999999999999999999999999999999999999999 9999999999999973222
Q ss_pred CcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 018219 154 GYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFL 233 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (359)
+..+ .......++...|....+.++++.+...++.++..|+...+..+.-.+...-+++....
T Consensus 168 ~~~~-----------------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l 230 (345)
T KOG2234|consen 168 SPTG-----------------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLL 230 (345)
T ss_pred CCCC-----------------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Confidence 2111 00122456778999999999999999999999999885554544444443333333333
Q ss_pred HHHhcC-CCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHh
Q 018219 234 ALFFGR-NPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIG 312 (359)
Q Consensus 234 ~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G 312 (359)
..+..+ +...|...- ..|-...+.-++..+.+=.+....+|+.+-..=.....+..+++.+.++.+++-+||....+|
T Consensus 231 ~~~~~d~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG 309 (345)
T KOG2234|consen 231 TILLQDGEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLG 309 (345)
T ss_pred HHhhccccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHH
Confidence 333222 111111110 122233333334444455556666777777777777788999999999999999999999999
Q ss_pred HHHHhhhhheeeeccCCC
Q 018219 313 AFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 313 ~~li~~gv~l~~~~~~~~ 330 (359)
+.+++.++.++...+.++
T Consensus 310 ~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 310 ALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHhhcCCccc
Confidence 999999999998555443
No 24
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.64 E-value=2.2e-14 Score=126.25 Aligned_cols=230 Identities=19% Similarity=0.203 Sum_probs=167.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 018219 67 SFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSL 146 (359)
Q Consensus 67 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~ 146 (359)
++++..++.+-+++. .+.+.+.+.++++++++..+++.++..++|++++++++|+|++++| |+++.+.++|+.
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence 467888888888887 9999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchh-HHHHHHHH
Q 018219 147 LFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLS-MNTLICFF 225 (359)
Q Consensus 147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~-~~~~~~~~ 225 (359)
++........+ .+++++..+.....+...|.++.++++++.+...++.++..|+.+.+.. ........
T Consensus 86 lv~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~ 154 (244)
T PF04142_consen 86 LVQLSSSQSSD-----------NSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLF 154 (244)
T ss_pred eeecCCccccc-----------cccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 98632221111 0000011111234556799999999999999999999999998654443 44444555
Q ss_pred HHHHHHHHHHHhcCCC-cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCC
Q 018219 226 ASLQTSFLALFFGRNP-TIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAER 304 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~ 304 (359)
+.+..++...+.+.+. .+.. .-+.|-...+.-++...++=.+....+|+.+...=+....++.+.+.+.+.++++.+
T Consensus 155 gi~~~~~~~~~~~~~~~~~~g--~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~ 232 (244)
T PF04142_consen 155 GILFNLLALLLSDGSAISESG--FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFP 232 (244)
T ss_pred HHHHHHHHHhcccccccccCC--chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5555544433322211 1110 011222223333444555666677788999999999999999999999999999999
Q ss_pred CcchhhHhHHHH
Q 018219 305 LHLSSLIGAFFI 316 (359)
Q Consensus 305 ~~~~~~~G~~li 316 (359)
++....+|+.++
T Consensus 233 ~s~~f~lg~~~V 244 (244)
T PF04142_consen 233 PSLSFLLGAALV 244 (244)
T ss_pred CchHHhhheecC
Confidence 999999998753
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.63 E-value=2.2e-14 Score=119.90 Aligned_cols=258 Identities=13% Similarity=0.105 Sum_probs=196.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219 36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL 115 (359)
Q Consensus 36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il 115 (359)
...++|+++....++--++..++.+. +.++-+-+.+..++.-. .+.....+.|+||.|-....+-.+..|+-++++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 45667777777776665554442221 13333344455555544 677777789999999999888899999999999
Q ss_pred HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219 116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH 195 (359)
Q Consensus 116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~ 195 (359)
++++.+++.+|++ ...+.++++|+++...-.+...+ ........|.++.+++-
T Consensus 129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~g---------------------~e~~t~g~GElLL~lSL 181 (337)
T KOG1580|consen 129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVGG---------------------AEDKTFGFGELLLILSL 181 (337)
T ss_pred ehhhhcccccHHH------HHHHHHHHHHHHHhhccccccCC---------------------CcccccchHHHHHHHHH
Confidence 9999999999998 99999999999999842222222 12234568999999999
Q ss_pred HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCC--cccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 018219 196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNP--TIWKLDWNVQFLTVMYCGVLNSALVYYLQTW 272 (359)
Q Consensus 196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~ 272 (359)
..-+.....+.+....+. ....++.++++.+.+.+..-.++.+.-+ ..+....+..|+.+..++ +++.+++.+.+.
T Consensus 182 ~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~a-i~s~LGQ~fIF~ 260 (337)
T KOG1580|consen 182 AMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLA-IASCLGQWFIFK 260 (337)
T ss_pred HhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHH-HHHHhhhHHHHH
Confidence 999988888888776543 3457888999998887776555433211 111112234677778888 678899999999
Q ss_pred HHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 273 CISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 273 a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
.+...+|..-+++..++-+|+++.+.++++++++..||+|.++++.+...=..
T Consensus 261 tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 261 TVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 99999999999999999999999999999999999999999999999776543
No 26
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.60 E-value=7e-13 Score=116.90 Aligned_cols=292 Identities=11% Similarity=0.095 Sum_probs=221.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHH--HHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018219 5 AYIPYMAIIFNQFAFAGSNILMKIALERGLN-QLVFVV--YRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLG 81 (359)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~--~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (359)
...+...++...+.--...+..|..+.. .+ |..+.. ++.+.+.+.+...-..+. -+.++++++..+..+...++.
T Consensus 10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~lf 87 (314)
T KOG1444|consen 10 QSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLLF 87 (314)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHHH
Confidence 3455666777777777778888988874 43 444444 888777777666543321 334557888888999999988
Q ss_pred HHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccccc
Q 018219 82 ATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVV 161 (359)
Q Consensus 82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~ 161 (359)
.+....-..+++|++....+++...+|+++++...+++|.+++++. +.++....+|.......+. ..
T Consensus 88 -~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d~-sf----- 154 (314)
T KOG1444|consen 88 -VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTDL-SF----- 154 (314)
T ss_pred -HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhccccc-ee-----
Confidence 8888889999999999999999999999999999999999998887 8888888887777653221 11
Q ss_pred ccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcC-
Q 018219 162 EKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGR- 239 (359)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (359)
...|..+++...++-+.+.+..|+..+... +...+..|..+.+.........+.++
T Consensus 155 ----------------------~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~ 212 (314)
T KOG1444|consen 155 ----------------------NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGEL 212 (314)
T ss_pred ----------------------cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcch
Confidence 235899999999999999999998876422 44678899999988887777766543
Q ss_pred C---CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHH
Q 018219 240 N---PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFI 316 (359)
Q Consensus 240 ~---~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li 316 (359)
+ .....+.....+..+...+++ +..-.++-.++.+..+++..++++..+...+.+-+.++.+++.++...+|..+-
T Consensus 213 ~~l~~~~~~~~~~~~~~~~~lScv~-gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~ 291 (314)
T KOG1444|consen 213 DALSLNFDNWSDSSVLVVMLLSCVM-GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVG 291 (314)
T ss_pred HHHHhhcccccchhHHHHHHHHHHH-HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHH
Confidence 1 111111223346666666655 445555677899999999999999888888888888888999999999999999
Q ss_pred hhhhheeeeccCCCCccC
Q 018219 317 VAGLYCVLWGKRKDSLAA 334 (359)
Q Consensus 317 ~~gv~l~~~~~~~~~~~~ 334 (359)
+.|-.++.+.+.++++.+
T Consensus 292 ~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 292 FFGGVLYSYATFRKKKQP 309 (314)
T ss_pred hhhhhHHhhhhhhhccCC
Confidence 999999988765554443
No 27
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.60 E-value=2.7e-14 Score=124.16 Aligned_cols=265 Identities=17% Similarity=0.192 Sum_probs=211.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHH
Q 018219 35 NQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFL 114 (359)
Q Consensus 35 ~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i 114 (359)
++..+++.+-+++.++-....-. ++.. ....+.|+.+...++.+ .++..+.+.|++|++-....+-.+.-.+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhc--cccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 47788888888887777444333 3222 23457788888899988 99999999999999999999999999999999
Q ss_pred HHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHH
Q 018219 115 LAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTS 194 (359)
Q Consensus 115 la~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a 194 (359)
+..++.|+|.+..+ .+...++-.|+.+....+.+. + ....++.+...|+.++...
T Consensus 126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~-s------------------~~~~g~~ns~~G~~Ll~~~ 180 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD-S------------------SSKSGRENSPIGILLLFGY 180 (327)
T ss_pred HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC-C------------------ccccCCCCchHhHHHHHHH
Confidence 99999999999998 999999999998887543222 1 1223456778999999999
Q ss_pred HHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc--cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 018219 195 HIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNPTI--WKLDWNVQFLTVMYCGVLNSALVYYLQT 271 (359)
Q Consensus 195 ~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~l~~ 271 (359)
-++-+..+..+.++.+++. ++..++.+.++++.+......+..++.... .-...+..+.-++... .++.+++...+
T Consensus 181 L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s-~~gavGQ~FI~ 259 (327)
T KOG1581|consen 181 LLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS-TCGAVGQLFIF 259 (327)
T ss_pred HHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH-Hhhhhhhheeh
Confidence 9999999999999988654 678899999999888877664432221111 1112234566676776 56678999999
Q ss_pred HHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219 272 WCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK 329 (359)
Q Consensus 272 ~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 329 (359)
+-+++.++...+.++.++-+++++++.+.+|.+++..||.|..+++.|+.+-...+.+
T Consensus 260 ~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 260 YTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999988766555
No 28
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.57 E-value=4.1e-13 Score=116.81 Aligned_cols=253 Identities=17% Similarity=0.220 Sum_probs=187.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCC---CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHH
Q 018219 36 QLVFVVYRHVIAMLLLGPFAYVLERKQR---PKPSFAVMA-KIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSF 111 (359)
Q Consensus 36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~---~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 111 (359)
|..++.++.++-.++-.......+++.. .+.++++.. +....|+.. .....+.+++++|++.+..++..+..++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 8888888877766665555444333222 245666554 445667666 88888888999999999999999999999
Q ss_pred HHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHH
Q 018219 112 TFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALI 191 (359)
Q Consensus 112 ~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~ 191 (359)
+.+++.++.=||.++.- ..-+.+..+|+++++. +.... ...|..+.
T Consensus 124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~-KsTqf---------------------------~i~Gf~lv 169 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTY-KSTQF---------------------------NIEGFFLV 169 (349)
T ss_pred HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEe-cccce---------------------------eehhHHHH
Confidence 99999999999999986 6666667777777763 33322 35899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhCC----CchhHHHHHHHHHHHHHHHHHHHhcCCCcc-----cccchh-hHHHHHHHHHHH
Q 018219 192 LTSHIALSSWLILQAKVFKEYP----APLSMNTLICFFASLQTSFLALFFGRNPTI-----WKLDWN-VQFLTVMYCGVL 261 (359)
Q Consensus 192 l~a~~~~a~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~l~~~g~~ 261 (359)
.++.++.++-..+.+...++.+ +|........-...+.++|..+.+|+.... +...++ ..+..+..++ .
T Consensus 170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l 248 (349)
T KOG1443|consen 170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-L 248 (349)
T ss_pred HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-H
Confidence 9999998888887777776543 788888888888888889988887763211 111111 1233333333 2
Q ss_pred HHHHHHH---HHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 262 NSALVYY---LQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 262 ~~~~~~~---l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
++..++. .-+.-..+++....++.+-..-+.+.+++.++.+|+++...|.|..+...|+.+..
T Consensus 249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 2333333 33345678899999999999999999999999999999999999999999999983
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.56 E-value=2.2e-13 Score=103.38 Aligned_cols=136 Identities=19% Similarity=0.147 Sum_probs=114.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219 187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV 266 (359)
Q Consensus 187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 266 (359)
..++++++++++++..++.|--.++. ||...+..+.....+....+....++ .......++..|..+.+.| ++++.+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSG-la~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSG-LAGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHH-HHHHHH
Confidence 45899999999999999999888874 77888888888877777666665433 2222123445788888888 778999
Q ss_pred HHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 267 YYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 267 ~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
..+|++|++..+++++.++.-++|+++.+++++++||++|..+++|+++|++|.++..+
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999988764
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.54 E-value=3.5e-14 Score=112.34 Aligned_cols=125 Identities=24% Similarity=0.420 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018219 17 FAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYV 96 (359)
Q Consensus 17 ~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 96 (359)
++||...++.|...++ .||...+++|+..+.+ +.++.....++..++.+++++......+.++...++.+++.+++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4799999999999986 9999999999999998 6666555555444567788899999999986699999999999999
Q ss_pred CchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 97 SPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 97 ~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
+++.++++.++.|+++.+++++++||++++++ ++|+++++.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 999999999999874
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.40 E-value=6.1e-13 Score=105.20 Aligned_cols=125 Identities=22% Similarity=0.411 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018219 196 IALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCIS 275 (359)
Q Consensus 196 ~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~ 275 (359)
++||.+.+..|+..++ .+|.....+++..+.+ ..+...+.++.. ....+...+....+.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 4689999999999998 4779999999999987 666666544422 22233447778888888888999999999999
Q ss_pred ccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 276 VKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 276 ~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
+.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988753
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.39 E-value=1.7e-12 Score=111.48 Aligned_cols=278 Identities=17% Similarity=0.173 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHh---cCC----ChHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-------------CHHHHHHHHHHHH
Q 018219 20 AGSNILMKIALE---RGL----NQLVFVVYRHVIAMLLLGPFAYVLERKQRPKP-------------SFAVMAKIFVLAL 79 (359)
Q Consensus 20 g~~~~~~k~~~~---~~~----~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g~ 79 (359)
+.+.+..|++-+ .|- .|+.....-++.-.+++..+..++.|...+.. +.++ ...+.-++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal 94 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPAL 94 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHH
Confidence 456777787532 222 37777777777777777777766654322210 1111 12333556
Q ss_pred HHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccc
Q 018219 80 LGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKS 159 (359)
Q Consensus 80 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~ 159 (359)
+- ..+..+.|.++.+++++..+++.....+|+.+++.-+++++++.++ |+|+....+|++++...+-...+
T Consensus 95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~~~-- 165 (372)
T KOG3912|consen 95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHLVT-- 165 (372)
T ss_pred HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeeccccc--
Confidence 66 7778888999999999999999999999999999999999999999 99999999999988632211111
Q ss_pred ccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhc
Q 018219 160 VVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFG 238 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (359)
...+...+...|+++.+.+-+.-|+..++.+|..++.. +|.....|...+|.++...+.....
T Consensus 166 ----------------~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~ 229 (372)
T KOG3912|consen 166 ----------------DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMY 229 (372)
T ss_pred ----------------CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHh
Confidence 01112355679999999999999999999998887654 8899999999999655555444321
Q ss_pred C-----CCcc-----cc---cc----hhhHHHHHHHHHHHHHHHHHH--HHHHHHhccCcceeeechhhHHHHHHHHHHH
Q 018219 239 R-----NPTI-----WK---LD----WNVQFLTVMYCGVLNSALVYY--LQTWCISVKGPVFTAMFIPVQLVIVALFSII 299 (359)
Q Consensus 239 ~-----~~~~-----~~---~~----~~~~~~~l~~~g~~~~~~~~~--l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~ 299 (359)
. .+.. +. .. ....-..+...|...+ ++++ .=..-.++.++++-.++-.++..+--+++..
T Consensus 230 yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vS-iAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~ 308 (372)
T KOG3912|consen 230 YIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVS-IAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIA 308 (372)
T ss_pred heecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhh-eeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHH
Confidence 1 1110 10 00 0011223333332222 1211 1123347788999999999999999999999
Q ss_pred HhcCCCcchhhHhHHHHhhhhheee
Q 018219 300 AFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 300 ~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
+..|..+..|+.|.++.+.|+++++
T Consensus 309 m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 309 MGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.37 E-value=1.9e-10 Score=101.09 Aligned_cols=222 Identities=16% Similarity=0.106 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 018219 68 FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSL 146 (359)
Q Consensus 68 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~ 146 (359)
.+.+...++.|++- .+++..++.++++...+.+.++ ..++-+.+.++++++++|--+..++ ..=.+++++.++|+.
T Consensus 42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~ 118 (269)
T PF06800_consen 42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVI 118 (269)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHH
Confidence 47888888899988 9999999999999999999999 6888888999999999998777660 000236667777877
Q ss_pred HHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHH
Q 018219 147 LFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFA 226 (359)
Q Consensus 147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
+.+..+++... .++..+...|....+.+.+.|..|...-|... .++.....-+. ++
T Consensus 119 lts~~~~~~~~--------------------~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~---~~~~~~~lPqa-iG 174 (269)
T PF06800_consen 119 LTSYQDKKSDK--------------------SSSKSNMKKGILALLISTIGYWIYSVIPKAFH---VSGWSAFLPQA-IG 174 (269)
T ss_pred Hhccccccccc--------------------cccccchhhHHHHHHHHHHHHHHHHHHHHhcC---CChhHhHHHHH-HH
Confidence 77632221111 11245667899999999999999999966632 25565555444 44
Q ss_pred HHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCc
Q 018219 227 SLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLH 306 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~ 306 (359)
.++.........+. +. .....|.. +..| +.-.+++.++..+.++.+.+..=.+..+.++++.+.+.+++||.-+
T Consensus 175 m~i~a~i~~~~~~~--~~--~~k~~~~n-il~G-~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt 248 (269)
T PF06800_consen 175 MLIGAFIFNLFSKK--PF--FEKKSWKN-ILTG-LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKT 248 (269)
T ss_pred HHHHHHHHhhcccc--cc--cccchHHh-hHHH-HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCc
Confidence 43333333222211 11 11113333 2334 3345788899999999999999999999999999999999999987
Q ss_pred ch----hhHhHHHHhhhhhe
Q 018219 307 LS----SLIGAFFIVAGLYC 322 (359)
Q Consensus 307 ~~----~~~G~~li~~gv~l 322 (359)
.. .++|.++++.|.++
T Consensus 249 ~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 249 KKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hhhHHHHHHHHHHHHHhhhc
Confidence 66 46788888888654
No 34
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.37 E-value=4.5e-12 Score=108.77 Aligned_cols=265 Identities=13% Similarity=0.104 Sum_probs=180.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchhhhhhcchhHHHHHH
Q 018219 36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDY-VSPTVATALGNVVPSFTFL 114 (359)
Q Consensus 36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~i 114 (359)
-..++|.++++-+.--+++.--.. ..+++.+.|++......= +..+.+-++++++ ++...-.++.+-+++.+++
T Consensus 33 gNLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~mF----F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~ 107 (330)
T KOG1583|consen 33 GNLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVAMF----FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI 107 (330)
T ss_pred eeehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehhee----eeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence 356778887777666555532111 223556666665544322 4445555699998 6777778889999999999
Q ss_pred HHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHH
Q 018219 115 LAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTS 194 (359)
Q Consensus 115 la~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a 194 (359)
+++++.|+|.+.+| +.++.+..+|+++.++.+.++.. ...++-+++........+..|+.+...+
T Consensus 108 ~g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~---------~~~~~l~~~~~~~~~~~w~iGi~lL~~a 172 (330)
T KOG1583|consen 108 LGWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGR---------SKLSGLDSGSAQSDFFWWLIGIALLVFA 172 (330)
T ss_pred HHHHhccceeehhh------hhhHHhhhhhheeEEeecCcchh---------hhhcccccCcccccchHHHHHHHHHHHH
Confidence 99999999999999 99999999999999865443322 1111112222223445788999999999
Q ss_pred HHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCC-cc-----------ccc---chhhHHHHHHHH
Q 018219 195 HIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNP-TI-----------WKL---DWNVQFLTVMYC 258 (359)
Q Consensus 195 ~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~---~~~~~~~~l~~~ 258 (359)
.+..|.-.+.++...+++. |+-...+|+-++ .+|..++..++. .+ .+. .-+..|..++.-
T Consensus 173 l~~sa~mgiyqE~~Y~kyGKh~~EalFytH~L----sLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n 248 (330)
T KOG1583|consen 173 LLLSAYMGIYQETTYQKYGKHWKEALFYTHFL----SLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFN 248 (330)
T ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHh----ccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHH
Confidence 9999999999998888764 767777777766 455555433211 00 111 112234433332
Q ss_pred HHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 259 GVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 259 g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
. +..-.+.-..+..-.+.++.+++++..++-+++++++.+.|+.+.+++.|+|..++..|.+++.-
T Consensus 249 ~-L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 249 V-LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred H-HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 22222222333344567888999999999999999999999999999999999999999888753
No 35
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.33 E-value=7.2e-12 Score=104.20 Aligned_cols=262 Identities=13% Similarity=0.135 Sum_probs=188.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219 36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL 115 (359)
Q Consensus 36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il 115 (359)
.+.+.+.+.+.+.+.+...-..+.-+ ++..+...++..+++. +...+.-..+++|++....+++.+++.+.++..
T Consensus 37 nflll~vQSlvcvv~l~iLk~l~~~~----fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpiYTiFKNltII~iAyg 111 (309)
T COG5070 37 NFLLLAVQSLVCVVGLLILKFLRLVE----FRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYG 111 (309)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhh----eehhhhhhhcCHHHHH-HHHHHhcccceeeeeeeHHHHhccceeehhHhh
Confidence 45566777776666665553332212 2223333444455555 555556679999999999999999999999999
Q ss_pred HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219 116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH 195 (359)
Q Consensus 116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~ 195 (359)
..+++|.|++-.+ ....++.+..-+...+.+.+... -..+..+.|.+|+...+
T Consensus 112 Evl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~~---------------------~~~~~lN~GY~Wm~~Nc 164 (309)
T COG5070 112 EVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQASA---------------------FKAQILNPGYLWMFTNC 164 (309)
T ss_pred HHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHHH---------------------HHhcccCCceEEEehhh
Confidence 9999999999998 88887777666665532221111 12245668999999999
Q ss_pred HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc-ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 018219 196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRN-PTIW-KLDWNVQFLTVMYCGVLNSALVYYLQTW 272 (359)
Q Consensus 196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~g~~~~~~~~~l~~~ 272 (359)
+..+.+....|+..+--. .....++|..+++..+++.+..+.++. +... ...++..+.++...| ++++..-++-.+
T Consensus 165 lssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg-l~svgiSy~saW 243 (309)
T COG5070 165 LSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG-LCSVGISYCSAW 243 (309)
T ss_pred HhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH-HHHhhhhhccce
Confidence 999999999887665211 237789999999998888888876541 1111 111222345566666 555566667889
Q ss_pred HHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219 273 CISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 273 a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
+++.++.+..++++.++..-..+.|.++++|+.+...+..+.+-..+..++...+.++
T Consensus 244 cvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k 301 (309)
T COG5070 244 CVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKK 301 (309)
T ss_pred eEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988887777776665543
No 36
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.32 E-value=1e-10 Score=106.02 Aligned_cols=278 Identities=15% Similarity=0.197 Sum_probs=160.7
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC-CCCHHH-HHHHHHHH
Q 018219 1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-KPSFAV-MAKIFVLA 78 (359)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g 78 (359)
||.+...|..+++.++++-+....+.|....+ .+ +...+. +..++. ....++.|
T Consensus 1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~-----------------------~~~~~~~~~~~~~l~~~~W~~G 56 (300)
T PF05653_consen 1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LP-----------------------RGSLRAGSGGRSYLRRPLWWIG 56 (300)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-----------------------cccccccchhhHHHhhHHHHHH
Confidence 78888999999999999999999999987543 10 000000 000111 12334455
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccc
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFK 158 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~ 158 (359)
.+...++..+.+.|+.+.|++..+++..+.-++.++++..++|||+++++ +.|+.++++|..++....+++.+.
T Consensus 57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~~~ 130 (300)
T PF05653_consen 57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEEPI 130 (300)
T ss_pred HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCCCc
Confidence 55557777888999999999999999999999999999999999999999 999999999999876432221110
Q ss_pred cccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH-------HH
Q 018219 159 SVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQ-------TS 231 (359)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 231 (359)
... ++-.+...+..+.....+ ...++..+.....+|..++ +..........+++.- ..
T Consensus 131 ~t~-----------~~l~~~~~~~~fl~y~~~--~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~ 195 (300)
T PF05653_consen 131 HTL-----------DELIALLSQPGFLVYFIL--VLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISI 195 (300)
T ss_pred CCH-----------HHHHHHhcCcceehhHHH--HHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHH
Confidence 000 000000011111111111 1112222222222222221 2221111111222110 00
Q ss_pred HHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhH-HHHHHHHHHHHhcCCCc--c-
Q 018219 232 FLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQ-LVIVALFSIIAFAERLH--L- 307 (359)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~-pv~a~l~~~~~~~e~~~--~- 307 (359)
.+-....+ .+.. ..+..|..++.. +.+........++|+++.+++.+.++.+.. ..++++-+.++++|..+ .
T Consensus 196 ~i~~~~~g-~~~f--~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~ 271 (300)
T PF05653_consen 196 LIKLTFSG-DNQF--TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAW 271 (300)
T ss_pred HHHHHhcC-chhh--hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHH
Confidence 01000111 1111 222345444333 345566667888899999998888777655 45566667778898643 3
Q ss_pred ---hhhHhHHHHhhhhheeeecc
Q 018219 308 ---SSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 308 ---~~~~G~~li~~gv~l~~~~~ 327 (359)
....|+.+++.|+++....|
T Consensus 272 ~~~~~~~G~~~ii~GV~lL~~~~ 294 (300)
T PF05653_consen 272 QIIGFLCGFLIIIIGVFLLSSSK 294 (300)
T ss_pred HHHHHHHHHHHHHHhhheeeccC
Confidence 34678899999999987543
No 37
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.30 E-value=1.8e-09 Score=98.73 Aligned_cols=302 Identities=13% Similarity=0.066 Sum_probs=185.3
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH--Hhhhcc---CCCCCCCHHHHHHHH
Q 018219 1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPF--AYVLER---KQRPKPSFAVMAKIF 75 (359)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~--~~~~~~---~~~~~~~~~~~~~~~ 75 (359)
|+++...|+++.+++.++||+.....|. .+. .+-..+ +.-..+-.-++.++ ..+..+ ......+.+.+...+
T Consensus 1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 1 MSNAIILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred CCchhHHHHHHHHHHHHHhhcccccccc-cCC-CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence 7888899999999999999999999997 442 442222 22111111111111 001011 112235677888888
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhccccc---ccccccccccchhHHHHHHHHHHHhhh
Q 018219 76 VLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKV---KITSGRGRAKVLGTIICVGGSLLFTLW 151 (359)
Q Consensus 76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~---~~~~~~~~~~~ig~~l~~~Gv~l~~~~ 151 (359)
+.|++- ..++..++.++++...+.+.++ ..++-++..++..++++|=- +..+ ...-.+|++++++|+++...-
T Consensus 78 l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 78 LFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHh
Confidence 889888 9999999999999999999988 89999999999999998643 2221 112377888889999888742
Q ss_pred ccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHH-------HHHHHHhhhCCCchhHHHHHHH
Q 018219 152 RSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWL-------ILQAKVFKEYPAPLSMNTLICF 224 (359)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~-------i~~~~~~~~~~~~~~~~~~~~~ 224 (359)
....+. ++. .++.++.+..+|+++++++++.++.|. ...+.......++......+..
T Consensus 155 g~~k~~-----------~~~----~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~ 219 (345)
T PRK13499 155 GQLKER-----------KMG----IKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYV 219 (345)
T ss_pred hhhccc-----------ccc----cccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHH
Confidence 111111 000 000134567899999999999999999 4443322222244433333333
Q ss_pred ---HHHHHHHH-HHHH---hcCCCccccc--chhh----HHHHHHHHHHHHHHHHHHHHHHHHhccCcceeee---ch-h
Q 018219 225 ---FASLQTSF-LALF---FGRNPTIWKL--DWNV----QFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAM---FI-P 287 (359)
Q Consensus 225 ---~~~~~~~~-~~~~---~~~~~~~~~~--~~~~----~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~---~~-~ 287 (359)
.+.++... +..+ .+++...... .+.. .....++.| +.=.+++..+..+.++.+...... +. .
T Consensus 220 ~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G-~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~ 298 (345)
T PRK13499 220 VIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAG-VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMS 298 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCccchHHHHHhcc
Confidence 33333332 2221 1111110111 1111 222223444 333466777777777776554433 33 7
Q ss_pred hHHHHHHHHHHHHhcCCCc------chhhHhHHHHhhhhheeee
Q 018219 288 VQLVIVALFSIIAFAERLH------LSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 288 ~~pv~a~l~~~~~~~e~~~------~~~~~G~~li~~gv~l~~~ 325 (359)
+..+++.+.+. ++||.=+ ..-++|.+++++|..+...
T Consensus 299 ~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 299 FYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 77899999999 5999876 4568999999999887654
No 38
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.28 E-value=1.3e-10 Score=104.18 Aligned_cols=132 Identities=21% Similarity=0.353 Sum_probs=113.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018219 5 AYIPYMAIIFNQFAFAGSNILMKIALERGLNQ--LVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGA 82 (359)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p--~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 82 (359)
...|.+++++++++|+...+..|...++ .++ .....+++.++.+++.++.....+. +..+.+++...+..++++.
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT 202 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence 4679999999999999999999998764 664 4555578899988888886653322 2346678888888888887
Q ss_pred HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHH
Q 018219 83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGS 145 (359)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv 145 (359)
..++.++++++++.+++.++.+.++.|+++++++++++||++++.+ ++|+.+.+.|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999 99999999886
No 39
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.25 E-value=2.6e-11 Score=94.24 Aligned_cols=104 Identities=18% Similarity=0.285 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHH
Q 018219 41 VYRHVIAMLLLGPFAYVLERKQ--RPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFL 118 (359)
Q Consensus 41 ~~r~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l 118 (359)
.+|+..+.+++..+...+++.+ .+..+++++......|.++...++.++++|+++.+ +.++++.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 4788888888888877643321 12234466677777888886699999999999999 58889999999999999999
Q ss_pred hcccccccccccccccchhHHHHHHHHHHHhhh
Q 018219 119 LGMEKVKITSGRGRAKVLGTIICVGGSLLFTLW 151 (359)
Q Consensus 119 ~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~ 151 (359)
++|||+++++ +++++++++|++++...
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence 9999999999 99999999999999853
No 40
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.21 E-value=3e-11 Score=103.63 Aligned_cols=278 Identities=14% Similarity=0.107 Sum_probs=192.4
Q ss_pred HHHHHHHhcC---C-ChHHHHHHHHHHHHHHHHHHHhhhccCC----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018219 24 ILMKIALERG---L-NQLVFVVYRHVIAMLLLGPFAYVLERKQ----RP--KPSFAVMAKIFVLALLGATIHINVYYIGM 93 (359)
Q Consensus 24 ~~~k~~~~~~---~-~p~~~~~~r~~~a~l~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al 93 (359)
...|+.++.. . .|...++.++++...+...+.....+-+ .+ +++.+.........+.. .+...+-++.+
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL 123 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL 123 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence 3456655420 2 3888999999888777666654432211 11 13334444444444444 44444556999
Q ss_pred hccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCc
Q 018219 94 DYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNA 173 (359)
Q Consensus 94 ~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
+|.+++...+=.++..+|++++++.++|+|-+..- ..++.+.+.|-.+=. +.+..
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGv--dqE~~----------------- 178 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGV--DQEGS----------------- 178 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhccccccccc------ceeehhheehheecc--ccccc-----------------
Confidence 99999999999999999999999999999988876 666655555543332 11111
Q ss_pred ccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCC--Ccccccc-hh
Q 018219 174 DHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRN--PTIWKLD-WN 249 (359)
Q Consensus 174 ~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~ 249 (359)
...-...|.+++..|.++-|+..+..|+...... .-...+.|....+.++.+|...+.+.- ...++.. ..
T Consensus 179 ------~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~ 252 (347)
T KOG1442|consen 179 ------TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAI 252 (347)
T ss_pred ------cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHH
Confidence 1122358999999999999999999997665432 335788999999999999998875441 1111222 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219 250 VQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK 329 (359)
Q Consensus 250 ~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 329 (359)
..|..+.+.|+++-.++|. -.+=+|.++|.+-.+-....-..-.+++..+++|..+..-|-|-.++++|...+.+-|..
T Consensus 253 ~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~ 331 (347)
T KOG1442|consen 253 KFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH 331 (347)
T ss_pred HHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence 3566666666544333332 334567889999999888888999999999999999999999999999999999876655
Q ss_pred CCccC
Q 018219 330 DSLAA 334 (359)
Q Consensus 330 ~~~~~ 334 (359)
+.+++
T Consensus 332 em~~~ 336 (347)
T KOG1442|consen 332 EMRKA 336 (347)
T ss_pred HHHhh
Confidence 54443
No 41
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.16 E-value=1.8e-09 Score=98.52 Aligned_cols=136 Identities=12% Similarity=0.078 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH 85 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (359)
..|.++.+.++++|+...+..|...++ .++..... ...++++++.++...... ....+...+...+..|+++..++
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999988764 78877654 445666666666554322 12244566666678888888999
Q ss_pred HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhh
Q 018219 86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLW 151 (359)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~ 151 (359)
+.++++++++.+++.++++.++.|+++.++++++++|+++..+ ++|.++.++|++.....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 99999999999988743
No 42
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.13 E-value=1.3e-09 Score=89.56 Aligned_cols=138 Identities=19% Similarity=0.181 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh------CCCchhHHHHHHHHHHHHHHHHHHHhcCCCccc-----cc---c-hhhH
Q 018219 187 GSALILTSHIALSSWLILQAKVFKE------YPAPLSMNTLICFFASLQTSFLALFFGRNPTIW-----KL---D-WNVQ 251 (359)
Q Consensus 187 G~~l~l~a~~~~a~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~-~~~~ 251 (359)
|.++++.+.++.+++.++.|+..++ ..++..+..+....+.+.+.|...+.+...... .. . .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999998776 338889999999999999999988866532111 00 0 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 252 FLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 252 ~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
+..++..| +.....+...+..+++.+|...++...+..+..++.+++++||+++..+++|+++.++|.+++.|
T Consensus 81 ~~~~~~~~-~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSG-LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 55555555 44567788888999999999999999999999999999999999999999999999999998864
No 43
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.10 E-value=4.2e-09 Score=98.13 Aligned_cols=138 Identities=9% Similarity=0.099 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHHHHHHHHhhhccCCC----CCCCHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQ-LVFVVYRHVIAMLLLGPFAYVLERKQR----PKPSFAVMAKIFVLALL 80 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p-~~~~~~r~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 80 (359)
..|..+++.++++|+...+..|...+. .++ ...+++...++.+.+.+......+... ...+.. ....+..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 347889999999999999999987765 654 466677777766666555544332211 112222 2223344554
Q ss_pred HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhc
Q 018219 81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWR 152 (359)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~ 152 (359)
. .+++.++++++++.+++.++++.++.|++++++++++++|++++.+ ++|.++++.|+.++...+
T Consensus 266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGK 330 (358)
T ss_pred H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhh
Confidence 4 6788899999999999999999999999999999999999999999 999999999999987543
No 44
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.09 E-value=3.3e-09 Score=96.75 Aligned_cols=137 Identities=20% Similarity=0.155 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH 85 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (359)
..|.++.++++++|+......|...+ -++...+.++..++.+.+.++............+...|......++++...+
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999997543 3455667788888888877776543222111235678888888999887899
Q ss_pred HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
+.+|++++++.+++.++++.++.|+++++++++++||+++..+ ++|.++.+.|+.+...
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 9999999999998863
No 45
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.06 E-value=1.7e-09 Score=98.83 Aligned_cols=138 Identities=9% Similarity=0.084 Sum_probs=109.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cchhhHHHHHHHHHH
Q 018219 183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWK--LDWNVQFLTVMYCGV 260 (359)
Q Consensus 183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~ 260 (359)
+..+|.+++++++++|+...+..|.. .+ -+|.....+++.++.++..+......+ ..... ......+. ....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence 44689999999999999999999765 44 368999999999998877766543321 11110 01122232 233555
Q ss_pred HHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 261 LNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 261 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
+..+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.++|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6677889999999999999999999999999999999999999999999999999999998875
No 46
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.05 E-value=1.1e-09 Score=93.91 Aligned_cols=259 Identities=13% Similarity=0.102 Sum_probs=187.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHH
Q 018219 36 QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLL 115 (359)
Q Consensus 36 p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il 115 (359)
.+.+++.++++-..+.+.-....+ .+++. -.|+.+..++.+. .....+..-++.|++-..-.++.++.-+-+++.
T Consensus 75 GWylTlvQf~~Ysg~glie~~~~~-~k~r~---iP~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmig 149 (367)
T KOG1582|consen 75 GWYLTLVQFLVYSGFGLIELQLIQ-TKRRV---IPWRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIG 149 (367)
T ss_pred chHHHHHHHHHHHhhhheEEEeec-cccee---cchhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhhhhhhe
Confidence 356677777666544444433322 22222 3355566677777 777777889999999888888899988889999
Q ss_pred HHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHH
Q 018219 116 AFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSH 195 (359)
Q Consensus 116 a~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~ 195 (359)
+.++-+.|..+.+ .++..+..+|+++..+.+.+... .-...|+...-.|-
T Consensus 150 gifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~~sP------------------------NF~~~Gv~mIsgAL 199 (367)
T KOG1582|consen 150 GIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQTSP------------------------NFNLIGVMMISGAL 199 (367)
T ss_pred eeeeccccccHHH------HHHHHHHHHHHHhhhhcccccCC------------------------CcceeeHHHHHHHH
Confidence 9999999999998 99999999999999864432211 22347888777777
Q ss_pred HHHHHHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc---hhhHHHHHHHHHHHHHHHHHHHHH
Q 018219 196 IALSSWLILQAKVFKEYP-APLSMNTLICFFASLQTSFLALFFGRNPTIWKLD---WNVQFLTVMYCGVLNSALVYYLQT 271 (359)
Q Consensus 196 ~~~a~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~l~~ 271 (359)
++-|.-.-.+++..+..+ +.-.+.+++..++.+.++........-+..|+.- +........+.+ +.+.++.....
T Consensus 200 l~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s-~~gylG~~~VL 278 (367)
T KOG1582|consen 200 LADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS-LAGYLGIVFVL 278 (367)
T ss_pred HHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH-HHhHhhHHHHH
Confidence 788866666666666544 3356778888888887777666554433444321 112344444444 44566666777
Q ss_pred HHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219 272 WCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 272 ~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
.-++..++..++.+...+--+++++++++|..++|....-|..+++.|+++-.+.++.+
T Consensus 279 alI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 279 ALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred HHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 77888999999999999999999999999999999999999999999999999887433
No 47
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.02 E-value=1.1e-09 Score=89.56 Aligned_cols=214 Identities=13% Similarity=0.125 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccc
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFK 158 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~ 158 (359)
++. .+.++.|..|++.++++.++.+..+...|+.+++++++++|+.-.+ +++.++++.|++++...+..
T Consensus 61 i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN~---- 129 (290)
T KOG4314|consen 61 IFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADNE---- 129 (290)
T ss_pred EEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccch----
Confidence 344 7788999999999999999999999999999999999999999987 99999999999988732221
Q ss_pred cccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHH----HHHHHHHH
Q 018219 159 SVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFA----SLQTSFLA 234 (359)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 234 (359)
..+...|+.+++.++...++|-+..|+...+. +--...-++..++ .+...|..
T Consensus 130 ----------------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA-n~Gdaa~FmS~LGF~NL~~~~~~~l 186 (290)
T KOG4314|consen 130 ----------------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNA-NFGDAAHFMSCLGFFNLCFISFPAL 186 (290)
T ss_pred ----------------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccC-cchhHHHHHHHHHHHHHHHHhhhHH
Confidence 13346899999999999999999999887652 2112222222222 12222222
Q ss_pred HHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHH
Q 018219 235 LFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAF 314 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~ 314 (359)
.........|.......|..+...+.+ +..-+.+.+.++..+.|...++-+.+...--...+.++-+-..+...+.|..
T Consensus 187 IL~~T~VE~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~ 265 (290)
T KOG4314|consen 187 ILAFTGVEHLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATC 265 (290)
T ss_pred HHHHhchHHHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 221112233432233467777666644 3345566778888889988888888888888888875444456788899999
Q ss_pred HHhhhhheeeecc
Q 018219 315 FIVAGLYCVLWGK 327 (359)
Q Consensus 315 li~~gv~l~~~~~ 327 (359)
+|+.|.++.....
T Consensus 266 iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 266 IICIGFILIIIPE 278 (290)
T ss_pred HHHHhHHheeccc
Confidence 9999998887554
No 48
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.02 E-value=4.9e-09 Score=95.11 Aligned_cols=133 Identities=11% Similarity=0.148 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHH
Q 018219 188 SALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVY 267 (359)
Q Consensus 188 ~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 267 (359)
.++.+.++++++...+..|+..++ +++ ...+.+..+.++..|....... ...++.... .+......+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 468899999999999999988776 333 3456666666666666654211 123332233 33334444546677889
Q ss_pred HHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 268 YLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 268 ~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
.++.+++++.+++.++++.+++|+++.+++++++||+++.++++|+.+++.|+.+...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988764
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.01 E-value=8.7e-09 Score=94.10 Aligned_cols=133 Identities=17% Similarity=0.162 Sum_probs=104.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH 85 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (359)
..|.++++.++++|+...+..|...++ .++....+ ....+.+.+.... ........+...|...+..++.. .++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~t-~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAAAAM-GFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHHHHH-HHH
Confidence 458899999999999999999987653 77765432 2233333332222 22212235667777777777554 889
Q ss_pred HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
+.++++++++.+++.++.+.++.|++.+++++++++|+++..+ ++|+++++.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999999 9999999999988863
No 50
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.00 E-value=1.6e-09 Score=95.72 Aligned_cols=280 Identities=15% Similarity=0.153 Sum_probs=168.5
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHH
Q 018219 1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALL 80 (359)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 80 (359)
|+.+...|.++++.+.++.|.+..+.|....+ ... .. .+......+. .++ +.+..|.+
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra~~gg~~y-l~~--~~Ww~G~l 72 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRAGEGGYGY-LKE--PLWWAGML 72 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccccCCCcch-hhh--HHHHHHHH
Confidence 56678899999999999999999999988764 110 00 1111111111 122 44567777
Q ss_pred HHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccc
Q 018219 81 GATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSV 160 (359)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~ 160 (359)
.+.++...-|.|+.+.|++..+++.+++-++.++++..+++|++++.. .+|+.++++|-.++.. ..+..+ +.
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~-haP~e~-~i 144 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVI-HAPKEQ-EI 144 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEE-ecCccc-cc
Confidence 778888888999999999999999999999999999999999999999 9999999999998874 222221 00
Q ss_pred cccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH-----HHHHHH
Q 018219 161 VEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQ-----TSFLAL 235 (359)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 235 (359)
++ . .+-.+...+..+..-..+.+. .++ +-....+. .....+++.......+.|++- .+-.++
T Consensus 145 ~t-~--------~el~~~~~~~~Fliy~~~iil-~~~--il~~~~~p-~~g~tnilvyi~i~s~iGS~tV~svKalg~ai 211 (335)
T KOG2922|consen 145 ES-V--------EEVWELATEPGFLVYVIIIIL-IVL--ILIFFYAP-RYGQTNILVYIGICSLIGSLTVMSVKALGIAI 211 (335)
T ss_pred cc-H--------HHHHHHhcCccHHHHHHHHHH-HHH--HHheeecc-cccccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence 00 0 000000011111111111111 111 11111111 111124444444444444111 111111
Q ss_pred --HhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhh-HHHHHHHHHHHHhcCCCcc-----
Q 018219 236 --FFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPV-QLVIVALFSIIAFAERLHL----- 307 (359)
Q Consensus 236 --~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~a~l~~~~~~~e~~~~----- 307 (359)
-..+ ..+. ..+..|..++... .+......-.++|++..+++.++++.+. -..++++-+.++|+|.-..
T Consensus 212 klt~~g-~~ql--~~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i 287 (335)
T KOG2922|consen 212 KLTFSG-NNQL--FYPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI 287 (335)
T ss_pred HHHhcC-Cccc--ccHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 1111 1122 2223566555554 4445566677889999988887776654 5677888888999986532
Q ss_pred -hhhHhHHHHhhhhheeeecc
Q 018219 308 -SSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 308 -~~~~G~~li~~gv~l~~~~~ 327 (359)
....|+..++.|+++....|
T Consensus 288 ~~~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 288 AGELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred HHHHHhHHHhhheeeEeeeec
Confidence 35789999999999986443
No 51
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.98 E-value=5.1e-09 Score=93.63 Aligned_cols=136 Identities=12% Similarity=0.180 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCC---cccccc-hhhHHHHHHHHHHH
Q 018219 186 KGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNP---TIWKLD-WNVQFLTVMYCGVL 261 (359)
Q Consensus 186 ~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~l~~~g~~ 261 (359)
+|..+.++++++|+...+..|.. .+ -+|.++.+++++++.+++.+......+.. ...+.. ....+..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 48899999999999999999984 44 47899999999999887776654432210 011111 11123445555543
Q ss_pred HHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 262 NSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 262 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
....+.++++++++.+++.++.+.++.|+++.+++.++++|+++..+++|..+.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999988764
No 52
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.93 E-value=5.2e-09 Score=91.52 Aligned_cols=216 Identities=13% Similarity=0.098 Sum_probs=130.1
Q ss_pred CchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCccccc--ccccccccccCCCcc
Q 018219 97 SPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKS--VVEKPLINIYNNNAD 174 (359)
Q Consensus 97 ~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 174 (359)
+........+..++++++..+...++|.+..+ +++.++...|+......+.+..... ..... ..+.+...+
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~-~~~~~~~~~ 75 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVA-IVQMVQSSA 75 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHe-eeecCCCCc
Confidence 34455667888899999999999999988776 9999999888876543322110000 00000 000000000
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcC-CC-cccccchhhHH
Q 018219 175 HLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR-NP-TIWKLDWNVQF 252 (359)
Q Consensus 175 ~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~ 252 (359)
......+...|....+.+.++.+...++.++..++.+............-.++.......... +. ..+... ..+
T Consensus 76 --~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 151 (222)
T TIGR00803 76 --KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGY 151 (222)
T ss_pred --cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCC
Confidence 001123556788888888888888888888877664322222122221111111111111111 10 011100 001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219 253 LTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV 323 (359)
Q Consensus 253 ~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 323 (359)
....+.-++...++..+..+.+++.++...+....++++++.+++.+++||+++..++.|+.+++.|+.++
T Consensus 152 ~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 152 PTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred chHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 11111222445667778899999999999999999999999999999999999999999999999998764
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.89 E-value=6.7e-08 Score=88.45 Aligned_cols=138 Identities=16% Similarity=0.251 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh---HHHHHHHHHHHHHHHHHHHhhhccCC-----CCCCCHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQ---LVFVVYRHVIAMLLLGPFAYVLERKQ-----RPKPSFAVMAKIFVL 77 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p---~~~~~~r~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 77 (359)
..|.+++++++++|+...+..|...+. .++ ....++...++.+.+........+.. ....+...|...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 468999999999999999999987553 332 23334444444333333322222211 123567888889999
Q ss_pred HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
|++...+.+.+++.++++.++..++.+..+.|++..++++++++|+++..+ ++|.++.++|+.+...
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence 999889999999999999999999999999999999999999999999999 9999999999988763
No 54
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.84 E-value=6.2e-08 Score=76.46 Aligned_cols=122 Identities=17% Similarity=0.146 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHH
Q 018219 186 KGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSAL 265 (359)
Q Consensus 186 ~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 265 (359)
.|.++.+.+.++.+...++.|+-.++.++ ...... . . ...... .+ . ...++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~~-----------~~--p-~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLAF-----------GL--A-LRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHHH-----------hc--c-HHHHHHHHHHHHH
Confidence 47789999999999999999988877432 221111 0 0 000011 00 1 1245778888999
Q ss_pred HHHHHHHHHhccCcceeeechhhHHHHHHHHHHH--HhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219 266 VYYLQTWCISVKGPVFTAMFIPVQLVIVALFSII--AFAERLHLSSLIGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 266 ~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~--~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 328 (359)
++.+|.+++++.+.+.+.++....++...+.++. ++||++|+.+++|+++|++|+++..+.++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999998888888875 79999999999999999999999875443
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.81 E-value=4e-08 Score=90.07 Aligned_cols=139 Identities=19% Similarity=0.293 Sum_probs=107.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhccCCCCC---------CCH-HHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALER-GLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPK---------PSF-AVMAKI 74 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~---------~~~-~~~~~~ 74 (359)
..|.+++++++++|+...+..|...+. +.+|...+++....+.+.+.|+........... ... ..+...
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 569999999999999999999987651 389999999999999998888876533211000 000 111112
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 75 FVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
+..+.......+.+++.+++++++..+++...+.|++++++++++++|+++..+ ++|.++++.|+.+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence 233332324445677789999999999999999999999999999999999999 9999999999998863
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.80 E-value=1.8e-08 Score=78.14 Aligned_cols=107 Identities=21% Similarity=0.377 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHH
Q 018219 221 LICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIA 300 (359)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~ 300 (359)
++...+.+..........+.....+......+......|++....++.++.++.++.+ ..++.+..++|+++.+++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666655554333212222222235566667676666689999999999999 588899999999999999999
Q ss_pred hcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219 301 FAERLHLSSLIGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 301 ~~e~~~~~~~~G~~li~~gv~l~~~~~~ 328 (359)
++|+++..+++|++++++|+.+..+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999876544
No 57
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.75 E-value=2.5e-09 Score=90.70 Aligned_cols=275 Identities=15% Similarity=0.149 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018219 7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHI 86 (359)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (359)
..++.+++-++.||+.+...-.. |=.|.+.+.-.-+-+.++-..+++. ..|.++.+.+...++.|.+- ..++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence 45788999999999988765432 4566666554444444433333333 22336678888888888888 9999
Q ss_pred HHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchh---HHHHHHHHHHHhhhccCcccccccc
Q 018219 87 NVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLG---TIICVGGSLLFTLWRSGYLFKSVVE 162 (359)
Q Consensus 87 ~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig---~~l~~~Gv~l~~~~~~~~~~~~~~~ 162 (359)
..++.|.++...+.+.++ ..++-+-+.+++++.+||--+..+ .++| +++.++|+.+-+. ++.
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~-~~~-------- 139 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSK-QDR-------- 139 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeee-ecc--------
Confidence 999999999999999999 778888899999999999877765 2222 2233333333321 110
Q ss_pred cccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 018219 163 KPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPT 242 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (359)
+ +.+.++.++...|....+.+.+.|-.|.+..+...-+ .++.. .-...+.++.....-..+.
T Consensus 140 -------~----nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~sai-LPqAiGMv~~ali~~~~~~--- 201 (288)
T COG4975 140 -------N----NKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAI-LPQAIGMVIGALILGFFKM--- 201 (288)
T ss_pred -------c----cccccChHhhhhheeeeeeeccceeeeEeeecccccc---chhhh-hHHHHHHHHHHHHHhhccc---
Confidence 0 0112245667889999999999999999987766532 22222 2233333333322222221
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchh----hHhHHHHhh
Q 018219 243 IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSS----LIGAFFIVA 318 (359)
Q Consensus 243 ~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~----~~G~~li~~ 318 (359)
-+......|..+ ..|++ =.+++..+..+.++.+..+.=.+..+..+++.+-+.++++|+-|..+ ++|++++++
T Consensus 202 -~~~~~K~t~~ni-i~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivv 278 (288)
T COG4975 202 -EKRFNKYTWLNI-IPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVV 278 (288)
T ss_pred -ccchHHHHHHHH-hhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHH
Confidence 111222233333 33433 35788888889999999988888999999999999999999988765 678888888
Q ss_pred hhheee
Q 018219 319 GLYCVL 324 (359)
Q Consensus 319 gv~l~~ 324 (359)
|..+..
T Consensus 279 gai~lg 284 (288)
T COG4975 279 GAILLG 284 (288)
T ss_pred Hhhhhh
Confidence 876654
No 58
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.74 E-value=3.7e-07 Score=74.76 Aligned_cols=133 Identities=23% Similarity=0.351 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHhhhccCCCCC----C-------CHHH
Q 018219 8 PYMAIIFNQFAFAGSNILMKIALER------GLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPK----P-------SFAV 70 (359)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~k~~~~~------~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~----~-------~~~~ 70 (359)
|.++++.+.++.+...+..|...+. +.++..+..+....+.+.+.+.....+..+..+ . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5788999999999999999998765 589999999999999999999877765533110 0 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHH
Q 018219 71 MAKIFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLL 147 (359)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l 147 (359)
+..++..|++. ...+...+..++++++...++......+.+.++++++++|+++..+ ++|++++++|+.+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 55566667777 8999999999999999999999999999999999999999999999 9999999999875
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.69 E-value=5.4e-07 Score=84.21 Aligned_cols=138 Identities=18% Similarity=0.154 Sum_probs=104.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHH
Q 018219 186 KGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSAL 265 (359)
Q Consensus 186 ~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 265 (359)
.-..+.+.=-.+...+++..|...+..+.|..++.+++.++.+..........+...... ....+|..++.+|++. ..
T Consensus 49 ~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~-~~ 126 (350)
T PTZ00343 49 KLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCH-LF 126 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHH-HH
Confidence 334444444555566788889888887558999999999997765544332111111111 1233677788888554 44
Q ss_pred HHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 266 VYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 266 ~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
.+...+.++++.+++.++++..++|+++++++.++++|+++..++.|.+++++|+.+...
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 577777999999999999999999999999999999999999999999999999998864
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.64 E-value=6.6e-07 Score=68.86 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 74 IFVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 74 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
....+.+++.++..++..+++..|.+.+..+.++.++++++++++++|||+++++ ++|+.++++|++++.
T Consensus 39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 3344556778899999999999999999999889999999999999999999999 999999999999885
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.61 E-value=7.9e-07 Score=80.91 Aligned_cols=128 Identities=12% Similarity=0.119 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH----HHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHV----IAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLG 81 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~----~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (359)
.+|+++.+++.+.++......|.. +.+|...++.... .+.+++.++ + +.++ .+.+..+..++.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKP-LKKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccc-hHHHHHHHHHHHHHHH
Confidence 679999999999999999999965 3888888666655 333333332 1 1122 2345555566688886
Q ss_pred HHHHHHHHHHHhh-ccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccc----hhHHHHHHHHHHHh
Q 018219 82 ATIHINVYYIGMD-YVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKV----LGTIICVGGSLLFT 149 (359)
Q Consensus 82 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~----ig~~l~~~Gv~l~~ 149 (359)
...+.+|+.+.+ +.+++.++++.+..|+...+++++++||+.++++ + +|.++.+.|+.+..
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG 287 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999 9 99999999998875
No 62
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.59 E-value=2e-06 Score=77.86 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVV-YRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATI 84 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~-~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 84 (359)
..|.++.+.+.++|+...+..|... . .++..... +..........+.... ... .....+.+......|+++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFLS--GFG-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHhc--ccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999766 3 66766666 4443222222222211 111 335678899999999999668
Q ss_pred HHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 85 HINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 85 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
++.+++.+++..++...+++..+.|++..++++++++|+++..+ ++|+++.+.|+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~ 286 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 999999999998886
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.47 E-value=6.5e-07 Score=68.90 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 259 GVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 259 g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
++++.+.++.++..++++.+.+.+-.+.++.++++.+++++++||++++.+++|++++++|+.+..
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 346667899999999999999999999999999999999999999999999999999999988764
No 64
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.42 E-value=6.7e-06 Score=64.90 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018219 7 IPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHI 86 (359)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (359)
.++++++++.++-+..-++.|...++ .+........ ...+ .. . ......+..|+..+.++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~~--~~~~----~~-~-----------~~p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWDF--IAAL----LA-F-----------GLALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhHH--HHHH----HH-H-----------hccHHHHHHHHHHHHHHH
Confidence 47888999999989999999988764 5433322111 0000 00 0 001125678888889999
Q ss_pred HHHHHHhhccCchhhhhhcchhHHHHHHHHHH--hcccccccccccccccchhHHHHHHHHHHHh
Q 018219 87 NVYYIGMDYVSPTVATALGNVVPSFTFLLAFL--LGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 87 ~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l--~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
.++..+++..|++.+.++.+..+.++.+.++. ++||++++.+ ++|+++.++|++++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence 99999999999999999999999888888885 8999999999 999999999999986
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.42 E-value=1.6e-06 Score=76.01 Aligned_cols=139 Identities=14% Similarity=0.128 Sum_probs=112.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc-cchhhHHHHHHHHHHHHH
Q 018219 185 IKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWK-LDWNVQFLTVMYCGVLNS 263 (359)
Q Consensus 185 ~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~ 263 (359)
..|+++++.|-+.|+.--.+.|-+.+. ++..+..++...+............+...-+. ...+..+......+++ .
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 479999999999999988887776544 56789999999988877776665543222221 2233466666676654 4
Q ss_pred HHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeec
Q 018219 264 ALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWG 326 (359)
Q Consensus 264 ~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~ 326 (359)
.....++.+|.++..+..+|.-.+++|.+.+++|.++++|+++..|+++.++..+|+....+.
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 578889999999999999999999999999999999999999999999999999999887654
No 66
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.33 E-value=1.3e-05 Score=73.68 Aligned_cols=139 Identities=14% Similarity=0.141 Sum_probs=112.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCC--CHHHHHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKP--SFAVMAKIFVLALLG 81 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 81 (359)
+..+|-++++.+++++|.+++.-+...++ .++.++..+-.+.+.++..+.....+++...+. +.+....++..+++.
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l 243 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCL 243 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence 56889999999999999999999999885 899999888888888888887776677655444 334333333333333
Q ss_pred HHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 82 ATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
+..+.+.-..+++.++....+=.-++.++.+++..+++|+++++.. ++|.+++++|.++...
T Consensus 244 -f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 244 -FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNL 305 (334)
T ss_pred -HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEc
Confidence 6666667788889998888777888899999999999999999998 9999999999998864
No 67
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.30 E-value=1e-05 Score=69.42 Aligned_cols=135 Identities=13% Similarity=0.058 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH 85 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (359)
-.|..+++.+..+|+..-+..|..-+. .+.-.-+..-+.+++++.+|+-........ +++.-....+..+++...+.
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~l--~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPAL--FSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchhh--cChHHHHHHHHHHHHhcccc
Confidence 578899999999999999999987653 666777888899999999999765333322 45566777788999999999
Q ss_pred HHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 86 INVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
+.+-..+++..|......+.++.|.+.++.+++++||+++..| |+++...+.+.+=.+
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~ 281 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGST 281 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999 999998887766443
No 68
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=98.09 E-value=0.0016 Score=59.03 Aligned_cols=303 Identities=13% Similarity=0.142 Sum_probs=179.6
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcc-CC----CCCCCHHHHHHHH
Q 018219 1 MNMKAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER-KQ----RPKPSFAVMAKIF 75 (359)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~-~~----~~~~~~~~~~~~~ 75 (359)
|++....|+++..++.++-|+..+-.|..- +.+-...=....+++.++ .|+...... +. ....+...+....
T Consensus 1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkvk--~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~ 77 (344)
T PF06379_consen 1 MNSAIILGIIFHAIGGFASGSFYVPFKKVK--GWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTF 77 (344)
T ss_pred CCchHHHHHHHHHHHHHHhhhhccchhhcC--CccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHH
Confidence 888889999999999999999999999653 255444444444444443 343322111 11 1223556777788
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccc-cccccccccchhHHHHHHHHHHHhhhcc
Q 018219 76 VLALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVK-ITSGRGRAKVLGTIICVGGSLLFTLWRS 153 (359)
Q Consensus 76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~-~~~~~~~~~~ig~~l~~~Gv~l~~~~~~ 153 (359)
+.|++- ..+...|-.+.+|+..+..+-+ ..+...+-.++-.++.++--. ..+.-+..-++|++++++|+.+.... |
T Consensus 78 l~G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G 155 (344)
T PF06379_consen 78 LFGVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA-G 155 (344)
T ss_pred HHHHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH-H
Confidence 899988 8899999999999998877755 777777777776666442100 01112333489999999999999632 2
Q ss_pred CcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHH-------hhhCCCchh----HHHHH
Q 018219 154 GYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKV-------FKEYPAPLS----MNTLI 222 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~-------~~~~~~~~~----~~~~~ 222 (359)
...+ ++ . ..+....+..+|+++++.+++..+..++-...- .+...+|+. .....
T Consensus 156 ~~Ke----------~~--~---~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv 220 (344)
T PF06379_consen 156 SMKE----------KE--L---GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVV 220 (344)
T ss_pred Hhhh----------hh--h---ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhh
Confidence 1111 00 0 001123567799999999999998887755321 111123332 22233
Q ss_pred HHHHHHHHHHHHHHhc---CCCc---ccccchh---hHHHHHHHHHHHHHHHHHHHHHHHHhccCc----ceeeechhhH
Q 018219 223 CFFASLQTSFLALFFG---RNPT---IWKLDWN---VQFLTVMYCGVLNSALVYYLQTWCISVKGP----VFTAMFIPVQ 289 (359)
Q Consensus 223 ~~~~~~~~~~~~~~~~---~~~~---~~~~~~~---~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~----~~~s~~~~~~ 289 (359)
+.-+.+.-...+++.. ++.. +.....+ ......++.|++ =...++.|..+-.+.+. .--.+.+.+.
T Consensus 221 ~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~ 299 (344)
T PF06379_consen 221 LWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALI 299 (344)
T ss_pred hhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHH
Confidence 3344555556665532 2221 1111111 122333333322 23445555556566664 3345667788
Q ss_pred HHHHHHHHHHHhcCCCc------chhhHhHHHHhhhhheeee
Q 018219 290 LVIVALFSIIAFAERLH------LSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 290 pv~a~l~~~~~~~e~~~------~~~~~G~~li~~gv~l~~~ 325 (359)
.+++-+++. .++|.-. ..-+.|+++++.++.++-+
T Consensus 300 vl~snvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 300 VLFSNVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHHHHHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 889999997 5777432 3347888888888776543
No 69
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.04 E-value=9.7e-05 Score=67.73 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhhhC-CC--chhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 018219 197 ALSSWLILQAKVFKEY-PA--PLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWC 273 (359)
Q Consensus 197 ~~a~~~i~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a 273 (359)
++..+.+.++++.++. .. |..++..++....+...+.......+ . .....+......+ +...++..+.+.+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~~a 84 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--K---SRKIPLKKYAILS-FLFFLASVLSNAA 84 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--C---CCcChHHHHHHHH-HHHHHHHHHHHHH
Confidence 3445667778877653 23 67888888888887777666543311 1 1112344444555 4456788889999
Q ss_pred HhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCCCccC
Q 018219 274 ISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAA 334 (359)
Q Consensus 274 ~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~~~ 334 (359)
+++.+.....+.....|+..++++.+++|++.+..++.+.+++.+|+.+....+.++.++.
T Consensus 85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~ 145 (303)
T PF08449_consen 85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS 145 (303)
T ss_pred HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence 9999999999999999999999999999999999999999999999999987765544443
No 70
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.03 E-value=2.8e-06 Score=73.31 Aligned_cols=137 Identities=12% Similarity=0.144 Sum_probs=101.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHH
Q 018219 183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLN 262 (359)
Q Consensus 183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 262 (359)
..+.|..+..++ ..+...++..++.... +|.......++.-.++..|..++..+. -+.... .-.++++=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g--~R~~LiLRg~m- 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEG--KRKWLILRGFM- 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCC--cEEEEEeehhh-
Confidence 456898888888 7777888888887765 567767677666566666555543221 111111 11222333433
Q ss_pred HHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219 263 SALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 263 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 327 (359)
+..+.++.++++++.+-+.+.++...+|++++++++++++|+.|.....|..+.+.|++++.+..
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 34677888899999999999999999999999999999999999999999999999999998653
No 71
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.00 E-value=2.3e-05 Score=60.75 Aligned_cols=68 Identities=21% Similarity=0.370 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhccCcceeeec-hhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219 260 VLNSALVYYLQTWCISVKGPVFTAMF-IPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 260 ~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 327 (359)
+++.+++++++..++|+.+.+.+=.+ ..+.-+.+.+.+++++||++++.+++|+.+|++|++......
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 45557899999999999998775444 568899999999999999999999999999999999886544
No 72
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.94 E-value=5.1e-05 Score=69.07 Aligned_cols=125 Identities=19% Similarity=0.224 Sum_probs=90.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHH
Q 018219 182 ENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVL 261 (359)
Q Consensus 182 ~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 261 (359)
.++..|..+++.++++.+....++|+...+.+. .....- ....++ ...+ .| +.|.+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~-----------------~~~~~~-l~~~-~W----~~G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAG-----------------SGGRSY-LRRP-LW----WIGLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccc-----------------chhhHH-HhhH-HH----HHHHH
Confidence 346799999999999999999999987665321 000000 000000 0111 22 22333
Q ss_pred HHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219 262 NSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 262 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
...++..+...|+...+++.++++..+..++..+++..++||+++..++.|+.+++.|..+......++
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~ 127 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE 127 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence 345666778889999999999999999999999999999999999999999999999998876554433
No 73
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.87 E-value=0.00027 Score=56.56 Aligned_cols=132 Identities=17% Similarity=0.169 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219 187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV 266 (359)
Q Consensus 187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 266 (359)
..++++.++++-++...++.++.++..+|...+...+..+.+.......+.++. ........+|+... |-+.+...
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l--GG~lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL--GGLLGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc--cHHHHHHH
Confidence 357889999999999999999999876789999999999998888877766543 22212222333322 33555677
Q ss_pred HHHHHHHHhccCcceeeech-hhHHHHHHHHHHH----HhcCCCcchhhHhHHHHhhhhhe
Q 018219 267 YYLQTWCISVKGPVFTAMFI-PVQLVIVALFSII----AFAERLHLSSLIGAFFIVAGLYC 322 (359)
Q Consensus 267 ~~l~~~a~~~~~~~~~s~~~-~~~pv~a~l~~~~----~~~e~~~~~~~~G~~li~~gv~l 322 (359)
..+....+++.+++....+. .-+-+.+.+++.+ .-++++++.+++|.+++++|+.+
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77888889999987765554 4456677777775 24567899999999999999864
No 74
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.84 E-value=0.00028 Score=53.70 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLF 148 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~ 148 (359)
..++..++++...+++++|.+.+..+ .....+.+++++++++||++++.+ ++|+.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 34447888899999999999999877 779999999999999999999999 99999999999876
No 75
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.80 E-value=0.0003 Score=62.25 Aligned_cols=117 Identities=12% Similarity=0.002 Sum_probs=89.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGAT 83 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 83 (359)
+..++++.++++.+.+....++.|.. +.+|....+-+..-..+.-.++.... ++. +..|..++-++.|++. .
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~---~~~k~~~~nil~G~~w-~ 206 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KKP---FFEKKSWKNILTGLIW-G 206 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-ccc---ccccchHHhhHHHHHH-H
Confidence 34679999999999999999998863 48887777655433333333333322 221 2234555667788888 9
Q ss_pred HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhccccccccc
Q 018219 84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITS 128 (359)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~ 128 (359)
.++.+++.+.+....+.+..+.++.+++..+.+.+++||+-++++
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke 251 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE 251 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence 999999999999999999999999999999999999999987776
No 76
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.69 E-value=0.00093 Score=53.49 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219 9 YMAIIFNQFAFAGSNILMKIALERGLN-QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN 87 (359)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (359)
.++++++..+-+....+.....++ .. |...+++.+..+.+++..+....+++..+..+..+|+. ..-|+++ ...-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHH-HHHHH
Confidence 466777778888888887777765 65 99999999999999998888776554333332223333 3477777 88888
Q ss_pred HHHHHhhccCchhhhhhcch-hHHHHHHHHHH----hcccccccccccccccchhHHHHHHHHHH
Q 018219 88 VYYIGMDYVSPTVATALGNV-VPSFTFLLAFL----LGMEKVKITSGRGRAKVLGTIICVGGSLL 147 (359)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~-~pi~~~ila~l----~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l 147 (359)
+.......++++.+..+.-+ +-+...++..+ .-++++++.+ ++|+++.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence 88999999999988877444 44455666654 2457777776 9999999999864
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.67 E-value=0.00012 Score=56.07 Aligned_cols=68 Identities=22% Similarity=0.380 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHhccCccee-eechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219 260 VLNSALVYYLQTWCISVKGPVFT-AMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 260 ~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 327 (359)
+++..+++.++..++++.+.+.+ +....+.-+.+.+.++++|+|++++.+++|+.++++|+++.+...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 34557888999999999888764 444667888899999999999999999999999999999986543
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.64 E-value=0.00022 Score=53.43 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 78 ALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
..+++..++.+...|++++|.+.+..+ .....+.+++.++++++|+++..+ ++|+.+.++|++.+-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence 344457888899999999999999877 899999999999999999999998 999999999998874
No 79
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.63 E-value=0.00032 Score=53.65 Aligned_cols=68 Identities=15% Similarity=0.263 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 77 LALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 77 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
..+.++.++..++..+++.+|.+.+..+ .....+.++++++++++|++++.+ ++|+.+.++|++++-.
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 3455558888889999999999999988 778999999999999999999999 9999999999999853
No 80
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.62 E-value=0.00021 Score=55.37 Aligned_cols=68 Identities=22% Similarity=0.237 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 77 LALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 77 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
..+..+..+.+++..+++++|.+.+..+ ....-+.++++++++++|++++.+ ++|+.+.++|++++-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence 4455558899999999999999999988 579999999999999999999999 9999999999988853
No 81
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.56 E-value=0.00033 Score=53.00 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
+.++..++++...+++.+|.+.+..+ .....+.+++++++++||++++.+ ++|+.+.++|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 44558889999999999999999877 779999999999999999999999 999999999999874
No 82
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.49 E-value=0.0012 Score=52.81 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=94.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHH
Q 018219 185 IKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSA 264 (359)
Q Consensus 185 ~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 264 (359)
....+.+++++++..+..-...++.+...+|.......+..+.+++..+.++.++. ..+.......|+.. +|-+...
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~--~GG~lGa 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAW--IGGLLGA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHH--Hccchhh
Confidence 36778899999999999999999999877899999999999988888777774332 22221122233322 2223333
Q ss_pred HHHHHHHHHHhccCcc-eeeechhhHHHHHHHHHHHHhc----CCCcchhhHhHHHHhhhhheeeec
Q 018219 265 LVYYLQTWCISVKGPV-FTAMFIPVQLVIVALFSIIAFA----ERLHLSSLIGAFFIVAGLYCVLWG 326 (359)
Q Consensus 265 ~~~~l~~~a~~~~~~~-~~s~~~~~~pv~a~l~~~~~~~----e~~~~~~~~G~~li~~gv~l~~~~ 326 (359)
+--+.......+.+++ .......-+-+.+++++.+=+. .+++...+.|++++++|+++..+.
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 3444445556666664 4555566677778888876443 467999999999999997666543
No 83
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.48 E-value=0.00043 Score=62.91 Aligned_cols=138 Identities=19% Similarity=0.293 Sum_probs=113.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHHH-HHHhhhccCCC----C-CCCHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALE---RGLNQLVFVVYRHVIAMLLLG-PFAYVLERKQR----P-KPSFAVMAKI 74 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~---~~~~p~~~~~~r~~~a~l~l~-~~~~~~~~~~~----~-~~~~~~~~~~ 74 (359)
-...|.+.++.+.+..+...++.|..+. .+++++......--++...++ |+.....+... . ..+...+. .
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-L 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-H
Confidence 3578999999999999999999999883 348899999888888888888 88776555332 1 22333333 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 75 FVLALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
....++. .+.+...|..+..+++-.-++....--.++.+.+++++++++++.+ ..|++++++|+.+-.
T Consensus 239 ~~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 239 LLNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHH
Confidence 3444666 8888999999999999999999999889999999999999999999 999999999998876
No 84
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.47 E-value=0.00032 Score=53.53 Aligned_cols=110 Identities=15% Similarity=0.248 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018219 13 IFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHINVYYIG 92 (359)
Q Consensus 13 l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 92 (359)
++..++||.++++.|...+ +.++..-.. |..-.... .+ ..|.+ .+ ++...-.+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~-----Ll-----------~n~~y-~i-pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF-----LL-----------LNPKY-II-PFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH-----HH-----------HhHHH-HH-HHHHHHHHHHHHHHH
Confidence 3567899999999999876 355433331 21111111 01 11222 22 333336677888999
Q ss_pred hhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 018219 93 MDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLF 148 (359)
Q Consensus 93 l~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~ 148 (359)
+...+.+.+.++ +++.=++|++.++++.+|..+++. ++|+.+.+.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 999999999999 589999999999888888888888 99999999998764
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.35 E-value=0.00045 Score=51.80 Aligned_cols=66 Identities=26% Similarity=0.417 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeec
Q 018219 261 LNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWG 326 (359)
Q Consensus 261 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~ 326 (359)
++...+|.+...++|+.+.+. .++..-...+.+.+.++++|+|++++.+++|..++++|++..+..
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 334678899999999988754 677788888999999999999999999999999999999987654
No 86
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.34 E-value=0.00087 Score=59.22 Aligned_cols=79 Identities=23% Similarity=0.301 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCC
Q 018219 251 QFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 251 ~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
+...+..-+ +...+.+.+.+.++++.+|+...++..+..+++.+++.++++.+++..||.+..++++|+.+........
T Consensus 16 ~~~~~~vPA-~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 16 DTLKLAVPA-LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 445555666 3467888999999999999999999999999999999999999999999999999999999998766554
No 87
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.30 E-value=0.0051 Score=54.24 Aligned_cols=193 Identities=12% Similarity=0.037 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018219 8 PYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIHIN 87 (359)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (359)
|+++++++.+++|++++-.|.. +. -|++.+-++......++-+.+.... ..++ -+...++-|.+- +.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~---~~p~----f~p~amlgG~lW-~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLIL---GFPP----FYPWAMLGGALW-ATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhc---CCCc----ceeHHHhhhhhh-hcCce
Confidence 5778999999999999999953 43 6787777777655555555554442 2222 233455566666 88999
Q ss_pred HHHHHhhccCchhhhhhcchhHHHH-HHHHHH-hcccccccccccccccchhHHHHHHHHHHHhhhccCccc-cccc--c
Q 018219 88 VYYIGMDYVSPTVATALGNVVPSFT-FLLAFL-LGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLF-KSVV--E 162 (359)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~~pi~~-~ila~l-~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~-~~~~--~ 162 (359)
+-.-.++.+..+....+-++.-+.+ -..+++ +++++.+.. +.....++|++++++|..+..+.+.+... .+++ +
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 9999999999999999966644333 333333 444433322 12233478888888888887654332211 0111 1
Q ss_pred cccccccCCC-cc----cccc-----cCccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018219 163 KPLINIYNNN-AD----HLRH-----HGKENWIKGSALILTSHIALSSWLILQAKVFKE 211 (359)
Q Consensus 163 ~~~~~~~~~~-~~----~~~~-----~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~ 211 (359)
....+..++. ++ +..+ ....+...|..+++++++.|+...+=...+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 1111101111 11 0000 112357789999999999999988877777665
No 88
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.29 E-value=0.00071 Score=51.22 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 261 LNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 261 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
++...++++...++|+.+.+. .++...+..+.+.+.+++++||++++.+++|+.++++|++..+.
T Consensus 37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 445789999999999988855 56777788899999999999999999999999999999998753
No 89
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.28 E-value=0.0029 Score=48.23 Aligned_cols=64 Identities=14% Similarity=0.168 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 261 LNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 261 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
.+..+++++...++|+.+.+. .++...+..+.+.+.+++++||++++.+++|+.+++.|+...+
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 445689999999999998865 5667778889999999999999999999999999999998764
No 90
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.10 E-value=0.0036 Score=57.12 Aligned_cols=142 Identities=15% Similarity=0.230 Sum_probs=113.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHhhhcc---CCCCCCCHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALERG---LNQLVFVVYRHVIAMLLLGPFAYVLER---KQRPKPSFAVMAKIFVL 77 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~---~~p~~~~~~r~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 77 (359)
+...|-++++++++++|...++.|.-.+.+ .+--.+--+-.++..++++|..++... .+..-++..+....+..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 457899999999999999999999876432 444444445556666677655544333 22223455666777888
Q ss_pred HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhh
Q 018219 78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLW 151 (359)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~ 151 (359)
++++.+++.++|..|.-.+++-.+++-..++....++.-.++.++++++.. ++|.+.+++|-+++...
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS 391 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence 999999999999999999999999999999999999999999999999998 99999999999988743
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.99 E-value=0.0034 Score=46.58 Aligned_cols=56 Identities=23% Similarity=0.366 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhccCccee-eechhhHHHHHHHHHHHHhcCCCcchhhHhHHHH
Q 018219 261 LNSALVYYLQTWCISVKGPVFT-AMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFI 316 (359)
Q Consensus 261 ~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li 316 (359)
.+..++++++..++|+.+.+.+ ++...+..+...+.+.+++||++|+.+++|+.+|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3567889999999999999887 5556799999999999999999999999999876
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.96 E-value=0.0059 Score=45.32 Aligned_cols=57 Identities=16% Similarity=0.165 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHH
Q 018219 78 ALLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTII 140 (359)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l 140 (359)
.+..+..+..++..+++++|.+.+..+ ..+..+.+.+++.+++||+++..+ ++|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 344558888999999999999999877 679999999999999999999998 998865
No 93
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.74 E-value=0.0011 Score=59.39 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=99.9
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHH
Q 018219 181 KENWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGV 260 (359)
Q Consensus 181 ~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 260 (359)
..++..|..+++.+.+..+...++.|+..++... . ..-......... . -...+.|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~--------------~~ra~~gg~~yl---~---~~~Ww~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----S--------------GLRAGEGGYGYL---K---EPLWWAGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----h--------------cccccCCCcchh---h---hHHHHHHH
Confidence 3456789999999999999999998887766311 0 000011111111 1 12335677
Q ss_pred HHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCCCCccC
Q 018219 261 LNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRKDSLAA 334 (359)
Q Consensus 261 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~~~ 334 (359)
+...++..+.+.|....+++.++++..++.+++.+++..+++|.+++...+|+++.++|..+...+.+++++..
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~ 145 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE 145 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence 77788999999999999999999999999999999999999999999999999999999988887766655443
No 94
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.45 E-value=0.07 Score=42.88 Aligned_cols=136 Identities=13% Similarity=0.100 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATIH 85 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (359)
...++..+.+..+-.....+...+.+..-+|....++.+..+..++..+.+...++......++.-++.+.-|.++ ..+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~ 82 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF 82 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence 4556677777777777777777666652359999999999999998888777444333322233334445556666 666
Q ss_pred HHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhc-c---cccccccccccccchhHHHHHHHHHHH
Q 018219 86 INVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLG-M---EKVKITSGRGRAKVLGTIICVGGSLLF 148 (359)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~-~---e~~~~~~~~~~~~~ig~~l~~~Gv~l~ 148 (359)
-..-........++....+ ..-+.+...++..+=. + ++++.. |++|+++.++|+.++
T Consensus 83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 5555666666766666555 4444555555554322 2 444444 499999999995554
No 95
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.42 E-value=0.058 Score=48.12 Aligned_cols=139 Identities=14% Similarity=0.157 Sum_probs=111.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC-----CCCHHHHHHHHHH
Q 018219 4 KAYIPYMAIIFNQFAFAGSNILMKIALE-RGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-----KPSFAVMAKIFVL 77 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~-~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 77 (359)
+...|+.++....++=|.++..-....+ ..+++..+.+.-.+..++.-...... ....++ +.+++-++-+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~-qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLIL-QGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhc-CCCCchHHHHHHcChhHHHHHHHH
Confidence 4578999999999988888776665553 44889999988888887776666433 222222 2356777888889
Q ss_pred HHHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 78 ALLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
+.++ ..++.+.++-++.-.+-..+.++.+--++..+++.++++.+++..| |+|+.+.+.|+.+=..
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHH
Confidence 9999 9999999999999888888888888899999999999999999999 9999999999887654
No 96
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.37 E-value=0.18 Score=46.63 Aligned_cols=145 Identities=11% Similarity=0.027 Sum_probs=92.3
Q ss_pred cchHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCChHHHHHHHHH---HHHHHH-HHHHhhhcc--CCC-----CC
Q 018219 4 KAYIPYMAIIFNQFAFAGSN-------ILMKIALERGLNQLVFVVYRHV---IAMLLL-GPFAYVLER--KQR-----PK 65 (359)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~-------~~~k~~~~~~~~p~~~~~~r~~---~a~l~l-~~~~~~~~~--~~~-----~~ 65 (359)
+..+|++.++++.+..+... +..+...+.+.++.....-.+. ++..+. ..++.++.+ ++. ++
T Consensus 171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~ 250 (345)
T PRK13499 171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS 250 (345)
T ss_pred chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence 34789999999999998888 5565544456676655554444 333332 223332211 221 11
Q ss_pred CC----HHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhh---hc-chhHHHHHHHHHHhcccccccccccccccchh
Q 018219 66 PS----FAVMAKIFVLALLGATIHINVYYIGMDYVSPTVATA---LG-NVVPSFTFLLAFLLGMEKVKITSGRGRAKVLG 137 (359)
Q Consensus 66 ~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig 137 (359)
.+ .+......+.|++- .+.+.+|..+-+..+...... +. ++..++..+.+. ++||+-+..+|..+.-++|
T Consensus 251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G 328 (345)
T PRK13499 251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG 328 (345)
T ss_pred ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence 12 23333336666666 788888888888876554444 54 666677777776 6999988555566667889
Q ss_pred HHHHHHHHHHHhh
Q 018219 138 TIICVGGSLLFTL 150 (359)
Q Consensus 138 ~~l~~~Gv~l~~~ 150 (359)
+++.++|..++..
T Consensus 329 ~vliI~g~~lig~ 341 (345)
T PRK13499 329 CVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988864
No 97
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.35 E-value=0.0058 Score=53.90 Aligned_cols=132 Identities=13% Similarity=0.014 Sum_probs=77.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219 187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV 266 (359)
Q Consensus 187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 266 (359)
|.+.+++|+++++...+=.|+.... |+.....+++....+.......+.+.+ .+ . .+..+|-..=..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f--~------p~amlgG~lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF--Y------PWAMLGGALWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc--e------eHHHhhhhhhhcC
Confidence 5678899999999998888876654 667766666665555555544433221 11 0 0111111112234
Q ss_pred HHHHHHHHhccCcceee-echhhHHHHHHHHHHH-HhcCCC-----cchhhHhHHHHhhhhheeeeccCCC
Q 018219 267 YYLQTWCISVKGPVFTA-MFIPVQLVIVALFSII-AFAERL-----HLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 267 ~~l~~~a~~~~~~~~~s-~~~~~~pv~a~l~~~~-~~~e~~-----~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
+.+-.-.+|..+-...- +....+.+.+...+.+ +||+.+ .+..++|++++++|..+...-|...
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 44444455555544332 2234466777777664 454432 4568999999999988887655444
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.23 E-value=0.0041 Score=53.54 Aligned_cols=132 Identities=19% Similarity=0.145 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 018219 187 GSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALV 266 (359)
Q Consensus 187 G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 266 (359)
..++++.=++.|+..-....+... .|..-+.-+.+-+.++.+.+.++ ..+... ...+..-...| +.=.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~-~~p~~T-----~~~~iv~~isG-~~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLF-VSPELT-----LTIFIVGFISG-AFWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHhee-ecCccc-----hhhHHHHHHhh-hHhhhh
Confidence 467888889999987777666543 34544444444444444444432 111111 11233233333 334578
Q ss_pred HHHHHHHHhccCcceeeechh-hHHHHHHHHHHHHhcCCCcchh----hHhHHHHhhhhheeeeccC
Q 018219 267 YYLQTWCISVKGPVFTAMFIP-VQLVIVALFSIIAFAERLHLSS----LIGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 267 ~~l~~~a~~~~~~~~~s~~~~-~~pv~a~l~~~~~~~e~~~~~~----~~G~~li~~gv~l~~~~~~ 328 (359)
+...+++++..+.+.+.++.. ++.+-+.+++.+.|||..+..+ .++.++++.|+.+..+.++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 889999999999999988764 6778889999999999998875 4567888899998876554
No 99
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.14 E-value=0.23 Score=45.49 Aligned_cols=140 Identities=17% Similarity=0.101 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCC---CchhHHHHHHHHHHHHHHHHHHHhcCC-----C---cccccchhhHHHHHHH
Q 018219 189 ALILTSHIALSSWLILQAKVFKEYP---APLSMNTLICFFASLQTSFLALFFGRN-----P---TIWKLDWNVQFLTVMY 257 (359)
Q Consensus 189 ~l~l~a~~~~a~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~l~~ 257 (359)
+..+...+-++......|...++.. .|.+.....-..-.++.....+..++. . .......+.....+..
T Consensus 18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v 97 (345)
T KOG2234|consen 18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV 97 (345)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence 4444455556666666666554421 334455555545455555455443211 0 1111111112233333
Q ss_pred HHHHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219 258 CGVLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK 329 (359)
Q Consensus 258 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 329 (359)
-+ +...+-+.+++.+..+.++++..+...+..+.+.++..++++++++..||...++...|+.+.+.....
T Consensus 98 Pa-~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 98 PA-LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred HH-HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 33 234566678999999999999999999999999999999999999999999999999999999854443
No 100
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.96 E-value=0.037 Score=42.32 Aligned_cols=109 Identities=11% Similarity=0.030 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 018219 193 TSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNSALVYYLQTW 272 (359)
Q Consensus 193 ~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~ 272 (359)
+.+++|+..+-+.|+..+..++.-.- . + ...-... ++. .|...+ .......+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~-~~~~~~~----Ll~-------------n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-Q-LLQEIKF----LLL-------------NPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-H-HHHHHHH----HHH-------------hHHHHH--HHHHHHHHHHHHHH
Confidence 45788999999999988865432221 1 2 1111111 110 111111 12223456677888
Q ss_pred HHhccCcceeeech-hhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219 273 CISVKGPVFTAMFI-PVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV 323 (359)
Q Consensus 273 a~~~~~~~~~s~~~-~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 323 (359)
.+.+.+-+.+.++. .+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 89999999999985 9999999999987777778888999999999998764
No 101
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.75 E-value=0.035 Score=48.31 Aligned_cols=58 Identities=16% Similarity=0.007 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 018219 83 TIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSL 146 (359)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~ 146 (359)
.....+....++|.+....+....+.++++.+++.++++|+++..+ ++|+.+.+.|+.
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~ 220 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATF 220 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeE
Confidence 6666778899999999999999999999999999999999999999 999999988864
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.35 E-value=0.16 Score=43.72 Aligned_cols=138 Identities=12% Similarity=0.072 Sum_probs=96.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHhhhccCCCC-----CCCHHHHHHHHHHH
Q 018219 5 AYIPYMAIIFNQFAFAGSNILMKIALERG-LNQLVFVVYRHVIAMLLLGPFAYVLERKQRP-----KPSFAVMAKIFVLA 78 (359)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~-~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g 78 (359)
...|-++++++..+-|.+...-...-..+ -+.-.+.+...+-..+.+..-..+. ...|. .-.+..|+-+...+
T Consensus 170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfT-GElweF~yF~~RhP~~~~~l~l~a 248 (337)
T KOG1580|consen 170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFT-GELWEFFYFVQRHPYVFWDLTLLA 248 (337)
T ss_pred cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheeh-hhHHHHHHHHHhccHHHHHHHHHH
Confidence 35677888888888888776654433211 2233333333344444332222111 11000 00235567778888
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
+.+ ++++.+.+.-..+-++-..+++..+--+|+.+.++++++..++.+| |+|.++.+.|...=..
T Consensus 249 i~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 249 IAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADVV 313 (337)
T ss_pred HHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHhh
Confidence 888 9999999999999999999999999999999999999999999999 9999999999877653
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=95.28 E-value=0.016 Score=48.22 Aligned_cols=64 Identities=13% Similarity=0.255 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219 265 LVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 265 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 328 (359)
.++++|..|+++.+++.++.+...+..|..++++++++|+.....++..++.+.|++...+..+
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 4678899999999999999999999999999999999999999999999999999999887544
No 104
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=93.98 E-value=0.51 Score=42.36 Aligned_cols=122 Identities=18% Similarity=0.254 Sum_probs=85.7
Q ss_pred HHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcC-CCc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccee
Q 018219 205 QAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGR-NPT-IWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFT 282 (359)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~ 282 (359)
.+...++++=|+.++......-.......-...+. .+. .-...+...+-.++-.| ++++.=..+-++++++++.+..
T Consensus 35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta-lata~DIGLSN~sl~yVtlSlY 113 (349)
T KOG1443|consen 35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA-LATALDIGLSNWSLEYVTLSLY 113 (349)
T ss_pred hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh-hhhhcccccccceeeeeeeeee
Confidence 34444455667777777776655554444333322 111 11222232333344444 5567777889999999999999
Q ss_pred eechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeecc
Q 018219 283 AMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGK 327 (359)
Q Consensus 283 s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 327 (359)
++.-...++|..+++.++-=|.+++.-..=..+|-+|+++..+..
T Consensus 114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 999999999999999999999999999888899999999988654
No 105
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.43 E-value=1.3 Score=40.09 Aligned_cols=131 Identities=12% Similarity=0.171 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCchhHHH--HHHHHHHHHHHHHHHHhcCCCcccccchhhHHHH--HHHHHHHHHH
Q 018219 189 ALILTSHIALSSWLILQAKVFKEYPAPLSMNT--LICFFASLQTSFLALFFGRNPTIWKLDWNVQFLT--VMYCGVLNSA 264 (359)
Q Consensus 189 ~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~~ 264 (359)
..++.-+++..+-.+..|.....++.|..+.. +|.+...+.....-...--+..+........|.. +++.+
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~----- 89 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVG----- 89 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHH-----
Confidence 34444444444555666777766665554444 7777766555443332111222333233333433 23333
Q ss_pred HHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeee
Q 018219 265 LVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLW 325 (359)
Q Consensus 265 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 325 (359)
....-..++++++.....++....|+...+.+..++|.+++...+.....+++|......
T Consensus 90 -~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 90 -MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred -HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 222345678999999999999999999999999999999999999999999999777653
No 106
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=93.04 E-value=0.19 Score=45.84 Aligned_cols=147 Identities=13% Similarity=0.000 Sum_probs=87.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHH-hcC-CC-cccccchhhHHHHHHHHH
Q 018219 183 NWIKGSALILTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALF-FGR-NP-TIWKLDWNVQFLTVMYCG 259 (359)
Q Consensus 183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~l~~~g 259 (359)
+...|+++-.+++++.+.+.+=.||..+- +-...-..+.+++ -+..|.... ..- +. .-....+...+....+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--sWEs~Wlv~gi~s-wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKGW--SWESYWLVQGIFS-WLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCCc--cHHHHHHHHHHHH-HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 35689999999999999999998886543 2112222233333 333333332 111 11 111222233555556666
Q ss_pred HHHHHHHHHHHHHHHhccCcce-eeechhhHHHHHHHHHHHHhcC-------CCcchhhHhHHHHhhhhheeeeccCCCC
Q 018219 260 VLNSALVYYLQTWCISVKGPVF-TAMFIPVQLVIVALFSIIAFAE-------RLHLSSLIGAFFIVAGLYCVLWGKRKDS 331 (359)
Q Consensus 260 ~~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~l~~~~~~~e-------~~~~~~~~G~~li~~gv~l~~~~~~~~~ 331 (359)
++ =.++-..|-.++|+++.+. .++..-+.-+++.++--++.++ +-....++|.++.++|+.+..+....++
T Consensus 81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke 159 (344)
T PF06379_consen 81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE 159 (344)
T ss_pred HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence 44 4567788889999998765 3444555556666665544332 2234678999999999999876654444
Q ss_pred cc
Q 018219 332 LA 333 (359)
Q Consensus 332 ~~ 333 (359)
++
T Consensus 160 ~~ 161 (344)
T PF06379_consen 160 KE 161 (344)
T ss_pred hh
Confidence 33
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.41 E-value=2.3 Score=31.75 Aligned_cols=111 Identities=16% Similarity=0.292 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018219 11 AIIFNQFAFAGSNILMKIALERGLN------QLVFVVYRHVIAMLLLGPFAYVLERKQRPKPSFAVMAKIFVLALLGATI 84 (359)
Q Consensus 11 ~~l~~~~~~g~~~~~~k~~~~~~~~------p~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 84 (359)
-++...++||.+..+.|.... +++ .-...++|-..... .+++++.. +.+ + -.
T Consensus 7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~iP-Fll---N-qc 64 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTLF----------------LNWEYLIP-FLL---N-QC 64 (125)
T ss_pred HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHHH----------------HhHHHHHH-HHH---H-Hh
Confidence 467778999999999998654 232 12222222211100 11222222 222 3 44
Q ss_pred HHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 85 HINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 85 ~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
+..+||.-+++.+.+.+..+ .++.-.|+.+.+..+ +|+..-+ +.++|..+.++|+.+.+
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~-----~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGG-----LALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccc-----eeehhhhHHhhhhhhee
Confidence 56677899999999999988 667778888888765 5544332 25999999999988764
No 108
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.11 E-value=0.41 Score=42.25 Aligned_cols=142 Identities=21% Similarity=0.198 Sum_probs=100.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhcc----CCCCC-CCHHHHHHHHHHH
Q 018219 5 AYIPYMAIIFNQFAFAGSNILMKIALER-GLNQLVFVVYRHVIAMLLLGPFAYVLER----KQRPK-PSFAVMAKIFVLA 78 (359)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~r~~~a~l~l~~~~~~~~~----~~~~~-~~~~~~~~~~~~g 78 (359)
...|.++.+++.+.-+...+.+|..+.. +=--+.++++..+.+.++++|...+... ...+. +..+.|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 4689999999999999999999965542 1125778889999999999998776533 11122 2567777788888
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcc
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRS 153 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~ 153 (359)
++++.. ++...+=++-++|-.--+=...-...-.+++..+++|..+... |-+-++.++|...-..-++
T Consensus 263 lfgF~m-gyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 263 LFGFAM-GYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHh-hheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence 888333 3333333444555444444445556678899999999999988 9999999999887765443
No 109
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=90.83 E-value=1.4 Score=37.79 Aligned_cols=135 Identities=13% Similarity=0.192 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC----CCCHHHHHHHHHHHHHHHH
Q 018219 9 YMAIIFNQFAFAGSNILMKIALE-RGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP----KPSFAVMAKIFVLALLGAT 83 (359)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~k~~~~-~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~ 83 (359)
++.+....+.-+......|.-.+ .+..-++..++..+++..++..+....+.+... .++.......++.|++. +
T Consensus 157 Y~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-v 235 (309)
T COG5070 157 YLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-V 235 (309)
T ss_pred eEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-h
Confidence 33333444433444444444332 236678889999999999998887776543322 23455666778888888 7
Q ss_pred HHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 84 IHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
.-.++.-+.++-++.+..++...+.-.-.++-+.++++|+.+... +.++.+++...++-..
T Consensus 236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav 296 (309)
T COG5070 236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV 296 (309)
T ss_pred hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence 778888889999999999999999888899999999999999998 9999998887776653
No 110
>PRK02237 hypothetical protein; Provisional
Probab=90.44 E-value=0.98 Score=33.91 Aligned_cols=47 Identities=19% Similarity=0.201 Sum_probs=39.2
Q ss_pred eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219 282 TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 282 ~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 328 (359)
.+.+.-.-.+.++++++.+-|++|+.+.++|..++++|+.++.+..|
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 34455566778889999999999999999999999999988876544
No 111
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=89.30 E-value=0.18 Score=44.03 Aligned_cols=139 Identities=14% Similarity=0.135 Sum_probs=100.0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhh-CCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHH
Q 018219 183 NWIKGSALILTSHIALSSWLILQAKVFKE-YPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVL 261 (359)
Q Consensus 183 ~~~~G~~l~l~a~~~~a~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 261 (359)
+.++|..++-.-.+|-......+..+.++ ...|...++.....-+++-.++..+.. .... ..|---++++ +
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~~----~~~~hYilla-~ 86 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KYIK----AKWRHYILLA-F 86 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HHHH----HHHHHhhhee-E
Confidence 34455555555555555555566666655 346777777777776777777776532 1111 1344455555 4
Q ss_pred HHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219 262 NSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK 329 (359)
Q Consensus 262 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 329 (359)
..+=++++...|.|+++-+.+..+..-..+...++++++++.+..+.++.|.++.++|+.+.......
T Consensus 87 ~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 87 VDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred EeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 45678888889999999999999888888899999999999999999999999999999998876543
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=87.63 E-value=0.74 Score=34.47 Aligned_cols=44 Identities=23% Similarity=0.276 Sum_probs=37.2
Q ss_pred chhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219 285 FIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 285 ~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 328 (359)
+.-.-.+.++++++.+-+++|+.+.++|..++++|+.++.+.+|
T Consensus 63 YGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 63 YGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred hhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 34445567889999999999999999999999999999887654
No 113
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=86.46 E-value=1.1 Score=40.34 Aligned_cols=130 Identities=10% Similarity=0.050 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcc--C----CCC-------CCCHHHHHHHHHHH
Q 018219 12 IIFNQFAFAGSNILMKIALERGLNQLVFVVYRHVIAMLLLGPFAYVLER--K----QRP-------KPSFAVMAKIFVLA 78 (359)
Q Consensus 12 ~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~--~----~~~-------~~~~~~~~~~~~~g 78 (359)
|+++.+|||+.+...|++.++ -...+...+-+.++.++..++..+... . ..| +-+++.....+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 356789999999999987664 444456777777776665555433211 1 111 12445555555555
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLF 148 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~ 148 (359)
++. .+++.+..+|+.+...+.+-++ .++.-+.-+++-+ ++..|.++.. .-..|+.+.++.+++=
T Consensus 80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~----iLF~GV~cf~iAI~lg 144 (336)
T PF07168_consen 80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAE----ILFPGVACFLIAIILG 144 (336)
T ss_pred Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCce----EEEccHHHHHHHHHHH
Confidence 555 8999999999999998888877 3443333444433 3344444321 1144666655555543
No 114
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=85.66 E-value=3.5 Score=30.72 Aligned_cols=47 Identities=23% Similarity=0.265 Sum_probs=39.4
Q ss_pred eeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccC
Q 018219 282 TAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 282 ~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 328 (359)
.+.+.-.-.+.++++.+.+-+.+|+.+.++|..+.++|+.++....+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 34555666788899999999999999999999999999888877644
No 115
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=85.61 E-value=1.4 Score=39.18 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeec
Q 018219 261 LNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWG 326 (359)
Q Consensus 261 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~ 326 (359)
++-..+-.+.+.++..++++...++.-...+|+-+++.-+++.+++..||.|+..+.+|+..+-..
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 445566667777888888888888888899999999999999999999999999999999888654
No 116
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.44 E-value=15 Score=32.77 Aligned_cols=139 Identities=18% Similarity=0.111 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhccCCCC------CCCHHHHHHHHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILM-KIALERGLNQLVFVVYRHVIAMLLLGPFAYVLERKQRP------KPSFAVMAKIFVLA 78 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~-k~~~~~~~~p~~~~~~r~~~a~l~l~~~~~~~~~~~~~------~~~~~~~~~~~~~g 78 (359)
..|+.++-.+.++-+...-.- |..-.+.-+..+++++...++.+.++........ ..+ +-+.+.....++.+
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~s 267 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLFS 267 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHHH
Confidence 456665555555555433222 3222334567888898888888887776655321 111 12345666666666
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhc
Q 018219 79 LLGATIHINVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWR 152 (359)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~ 152 (359)
..+ .++..+-..-++.-.+..++.+...--..|.+++++++.++++.+- .-+..+.+.|+.+=..++
T Consensus 268 ~~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 268 LAG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence 666 5555555555555677777777777778999999999999999987 888888999998876543
No 117
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=78.51 E-value=42 Score=28.72 Aligned_cols=32 Identities=13% Similarity=0.317 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCchhh
Q 018219 69 AVMAKIFVLALLGATIHINVYYIGMDYVSPTVA 101 (359)
Q Consensus 69 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~ 101 (359)
+.++..++.++.. ...+...+.....+|+...
T Consensus 144 ~~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~in 175 (206)
T PF06570_consen 144 PSWWKYILISVLA-MVLWIVIFVLTSFLPPVIN 175 (206)
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHccccCC
Confidence 4445555555555 4455555555555666544
No 118
>PRK02237 hypothetical protein; Provisional
Probab=75.91 E-value=18 Score=27.34 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=37.1
Q ss_pred chhhh-hhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 98 PTVAT-ALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 98 ~~~~~-~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
.+.+. .......+...+..+.+-++|+++.+ ++|..++++|+.++.+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence 44443 33566666777888999999999998 9999999999998863
No 119
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=70.96 E-value=6.1 Score=29.60 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=26.2
Q ss_pred HHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 294 ALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 294 ~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
..++.++++|++++....|..+++++++...
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 4566788999999999999999999887653
No 120
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=69.89 E-value=13 Score=27.78 Aligned_cols=59 Identities=15% Similarity=0.122 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhccCcceeeech-hhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhhee
Q 018219 265 LVYYLQTWCISVKGPVFTAMFI-PVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCV 323 (359)
Q Consensus 265 ~~~~l~~~a~~~~~~~~~s~~~-~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 323 (359)
.+-.+|+..+++.+-+.+..+. .+.-.|+.+.|..+-.|......+.|..+++.|+.+.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 3556677778888887776654 5577888899986555667788899999999998764
No 121
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=67.76 E-value=77 Score=26.98 Aligned_cols=24 Identities=21% Similarity=0.348 Sum_probs=17.1
Q ss_pred HHHHHHHhcCCCcchhhHhHHHHh
Q 018219 294 ALFSIIAFAERLHLSSLIGAFFIV 317 (359)
Q Consensus 294 ~l~~~~~~~e~~~~~~~~G~~li~ 317 (359)
-.+|..++.+..-+-+.+|..+.+
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLv 156 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLV 156 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445777777777777788877765
No 122
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=66.67 E-value=17 Score=27.13 Aligned_cols=42 Identities=17% Similarity=0.320 Sum_probs=34.8
Q ss_pred hhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 103 ALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 103 ~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
.......+...+..+++-+.++++.+ ++|..+|++|+.++.+
T Consensus 63 AYGGvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~ 104 (109)
T COG1742 63 AYGGVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF 104 (109)
T ss_pred HhcchHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence 34566667778888888899999998 9999999999888764
No 123
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=65.55 E-value=20 Score=27.02 Aligned_cols=52 Identities=17% Similarity=0.239 Sum_probs=40.1
Q ss_pred hhccCchhhh-hhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 93 MDYVSPTVAT-ALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 93 l~~~~~~~~~-~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
++-.+.+.+. .......+...+..+.+-++++++.+ ++|..++++|+.++.+
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 4444444443 33666777788888999999999998 9999999999999863
No 124
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=59.91 E-value=3 Score=37.04 Aligned_cols=11 Identities=9% Similarity=0.302 Sum_probs=0.0
Q ss_pred hhhhHHHHHHH
Q 018219 184 WIKGSALILTS 194 (359)
Q Consensus 184 ~~~G~~l~l~a 194 (359)
...|+++.++.
T Consensus 105 LF~Gi~~l~l~ 115 (381)
T PF05297_consen 105 LFVGIVILFLC 115 (381)
T ss_dssp -----------
T ss_pred HHHHHHHHHHH
Confidence 34565544443
No 125
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=58.79 E-value=1.4e+02 Score=26.94 Aligned_cols=134 Identities=14% Similarity=0.114 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHh-----hh--ccCC---CCCC---CHHHH
Q 018219 6 YIPYMAIIFNQFAFAGSNILMKIAL-ERGLNQLVFVVYRHVIAMLLLGPFAY-----VL--ERKQ---RPKP---SFAVM 71 (359)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~k~~~-~~~~~p~~~~~~r~~~a~l~l~~~~~-----~~--~~~~---~~~~---~~~~~ 71 (359)
..|+.++.++.+.-+...+.-.... .+|-++-+..|+..+.....++...- ++ .+.+ -+.. -+..|
T Consensus 163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~ 242 (330)
T KOG1583|consen 163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW 242 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence 4667777777777777777766665 35688999999999888766654311 00 0000 0111 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc----cCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHH
Q 018219 72 AKIFVLALLGATIHINVYYIGMDY----VSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLL 147 (359)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l 147 (359)
.+++. .++.+++-..+.-. .++-++++...+-=.+..+++.+.++..+++.. |+|..+.+.|..+
T Consensus 243 ~yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h------~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 243 VYLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH------WLGAALVFFGTLL 311 (330)
T ss_pred HHHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH------HHHHHHHHHHHHH
Confidence 22222 23344333333332 234445556666677889999999999999999 9999999999999
Q ss_pred Hhh
Q 018219 148 FTL 150 (359)
Q Consensus 148 ~~~ 150 (359)
...
T Consensus 312 fa~ 314 (330)
T KOG1583|consen 312 FAN 314 (330)
T ss_pred HHH
Confidence 873
No 126
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=57.27 E-value=74 Score=23.95 Aligned_cols=45 Identities=9% Similarity=0.003 Sum_probs=27.9
Q ss_pred cCchhhhhh-cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 018219 96 VSPTVATAL-GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSL 146 (359)
Q Consensus 96 ~~~~~~~~l-~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~ 146 (359)
.+++.--++ ...+-..-+.++.+++||++++.. +.|..+.+.++.
T Consensus 59 ~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~ 104 (108)
T PF04342_consen 59 FSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNY------LWAFLCILGAVY 104 (108)
T ss_pred cCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHH------HHHHHHHHHhhh
Confidence 344433344 223334456678899999999997 777766655543
No 127
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=56.29 E-value=1.8e+02 Score=27.32 Aligned_cols=7 Identities=14% Similarity=-0.031 Sum_probs=3.1
Q ss_pred HHHHHHH
Q 018219 230 TSFLALF 236 (359)
Q Consensus 230 ~~~~~~~ 236 (359)
.+|..++
T Consensus 41 ~lP~liF 47 (385)
T PF03547_consen 41 FLPALIF 47 (385)
T ss_pred HHHHHHH
Confidence 3444443
No 128
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.18 E-value=21 Score=26.29 Aligned_cols=31 Identities=23% Similarity=0.444 Sum_probs=26.6
Q ss_pred HHHHHHHhcCCCcchhhHhHHHHhhhhheee
Q 018219 294 ALFSIIAFAERLHLSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 294 ~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 324 (359)
..++.+.++|++.+..+.|..++..|+....
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 3467788999999999999999999987654
No 129
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=53.62 E-value=2.2e+02 Score=27.74 Aligned_cols=26 Identities=8% Similarity=0.392 Sum_probs=20.2
Q ss_pred CcchhhHhHHHHhhhhheeeeccCCC
Q 018219 305 LHLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 305 ~~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
++..|++.+.++++|+++..+.++++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~~~ 279 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPKGR 279 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccC
Confidence 68889999999999988776544433
No 130
>COG3247 HdeD Uncharacterized conserved protein [Function unknown]
Probab=53.45 E-value=1.4e+02 Score=25.19 Aligned_cols=62 Identities=13% Similarity=0.207 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhccCcceeeechhhHHHHHHHHHHHHhcCCCc----chhhHhHHHHhhhhheee
Q 018219 260 VLNSALVYYLQTWCISVKGPVFTAMFIPVQLVIVALFSIIAFAERLH----LSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 260 ~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~l~~~~~~~e~~~----~~~~~G~~li~~gv~l~~ 324 (359)
.+.+.+.........+..+ -.......=+++++.+.++.-++.. ..-++|+-+++.|..+..
T Consensus 111 ~i~~GI~ri~~~~~~~~~~---G~~w~ii~Gvl~ii~g~ill~~P~~~~~~l~~llGI~li~~G~~~i~ 176 (185)
T COG3247 111 FIASGILRIVVAFRLRSLP---GWWWMIISGVLGIIAGLILLFNPVASAWILGLLLGIELIFQGIALIA 176 (185)
T ss_pred HHHHHHHHHHHHHHccccC---CcHHHHHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444443333333 4455777778889999888877432 335778888888876654
No 131
>PF15102 TMEM154: TMEM154 protein family
Probab=52.61 E-value=15 Score=29.40 Aligned_cols=24 Identities=17% Similarity=0.318 Sum_probs=14.1
Q ss_pred hHhHHHHhhhhheeeeccCCCCcc
Q 018219 310 LIGAFFIVAGLYCVLWGKRKDSLA 333 (359)
Q Consensus 310 ~~G~~li~~gv~l~~~~~~~~~~~ 333 (359)
+++++|++..++++.+.|||+.|.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 344555556666766666665544
No 132
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=51.73 E-value=82 Score=25.55 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=47.9
Q ss_pred chhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhhCC-
Q 018219 135 VLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKEYP- 213 (359)
Q Consensus 135 ~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~~~- 213 (359)
-++++.++.|.=++..++--+.. ++...+.+|..+.+++.+..+.+....--+.+++.
T Consensus 92 slAVV~AIFGLElLmvSQvcEd~---------------------~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vt 150 (184)
T PF15108_consen 92 SLAVVVAIFGLELLMVSQVCEDA---------------------HSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVT 150 (184)
T ss_pred HHHHHHHHHhHHHHHHHHHHhcc---------------------hhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchh
Confidence 45667777887777654432211 24567889999998888877765555444555432
Q ss_pred -CchhHHHHHHHHHHHHHH
Q 018219 214 -APLSMNTLICFFASLQTS 231 (359)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~ 231 (359)
-.+++++|.-+.+..+..
T Consensus 151 l~GFTL~fWCeFtAsFLfF 169 (184)
T PF15108_consen 151 LIGFTLMFWCEFTASFLFF 169 (184)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 235677777777665544
No 133
>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function.
Probab=48.19 E-value=2.1e+02 Score=25.89 Aligned_cols=124 Identities=17% Similarity=0.118 Sum_probs=56.1
Q ss_pred cchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccch
Q 018219 105 GNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENW 184 (359)
Q Consensus 105 ~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (359)
.++..+++++.++.++++..+... .+.|-+++-+|.+-...... .++++.+.+.+.++.++++....+..+.
T Consensus 80 GY~~a~~T~i~G~~~~~~~~~~~~-----fVaGhVi~GvGlItaCVaT~---AtSStrF~LIP~Ns~~~~~~~p~~afs~ 151 (347)
T PF10951_consen 80 GYLAAAITIIGGIYIFSSGPNAAY-----FVAGHVIFGVGLITACVATV---ATSSTRFTLIPKNSKGTSHEVPKGAFSR 151 (347)
T ss_pred HHHHHHHHHHHHHHHhcCCCChhh-----hccCceeechhHHHHHHHHh---hhccccEEEeecCCCCCCCCCChhhcch
Confidence 344455666666666665443332 14444333333332221100 0111222334333333333344444555
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhC-CCch------hHHHHHHHHHHHHHHHHHHH
Q 018219 185 IKGSALILTSHIALSSWLILQAKVFKEY-PAPL------SMNTLICFFASLQTSFLALF 236 (359)
Q Consensus 185 ~~G~~l~l~a~~~~a~~~i~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~ 236 (359)
..|.++.....++.-...+..-.+.++. .+|. .+....+..+.++.+.....
T Consensus 152 ~~~~~Liav~~~~~li~~iw~~~Ll~~~~~~p~y~VAGhVm~Gla~iCtsLIaLVAtI~ 210 (347)
T PF10951_consen 152 GQGNILIAVPILCALIGWIWAIVLLSSSDEHPAYFVAGHVMFGLACICTSLIALVATIA 210 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceehhHHHhhHHHHHHHHHHHHHHHH
Confidence 6677777666666666555555444321 2332 34444555555555544443
No 134
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=48.12 E-value=1.9e+02 Score=26.49 Aligned_cols=77 Identities=16% Similarity=0.058 Sum_probs=44.1
Q ss_pred chhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHH-------HHHHH-H
Q 018219 135 VLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSS-------WLILQ-A 206 (359)
Q Consensus 135 ~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~-------~~i~~-~ 206 (359)
+-++.++..|+..+.. .-+.. .......|..+..++.+.+.. -.+.. |
T Consensus 7 ~f~~~mGtg~l~~~~~-~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~ 62 (330)
T PF03595_consen 7 WFGMVMGTGGLSNLLY-LLPYH-----------------------FGGLAILSEVLFILALILFLVLLVLYLLRWIRYPK 62 (330)
T ss_dssp GGHHHHHHHHHHHHHH-TTTTT-----------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHH-HHHHh-----------------------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 8889999888888862 11111 123344666666666666665 22222 2
Q ss_pred HHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 018219 207 KVFKEYPAPLSMNTLICFFASLQTSFLAL 235 (359)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (359)
+..++..||....++.....+...+....
T Consensus 63 ~~~~el~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 63 AFKAELRHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp HHHHHHHSTTGGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 33445457777777766666555554444
No 135
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=47.46 E-value=2.2e+02 Score=25.88 Aligned_cols=77 Identities=13% Similarity=0.071 Sum_probs=39.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhcCC-CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeechhhHH
Q 018219 214 APLSMNTLICFFASLQTSFLALFFGRN-PTIWKLDWNVQFLTVMYCGVLNSALVYYLQTWCISVKGPVFTAMFIPVQL 290 (359)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~p 290 (359)
+|-..+.....++.++.+..+....++ +......++...-.+.+.+++.+.++-.-......-.+-.....+...-|
T Consensus 118 d~~~~tlv~lgig~i~Ali~a~~itk~~~~~~~~e~~Rll~~vG~a~iLPQlLAaLG~vF~~AGVG~vIa~lv~~viP 195 (308)
T PF06166_consen 118 DPKNGTLVGLGIGAIVALIVALIITKPKPKQPLKESRRLLDQVGWAAILPQLLAALGAVFTAAGVGDVIASLVSSVIP 195 (308)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhCCChhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCccHHHHHHHHhhcC
Confidence 334445556666666666666665443 22222233334556666666666666655555554444444444444333
No 136
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=44.71 E-value=9 Score=34.63 Aligned_cols=131 Identities=13% Similarity=0.085 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHh-cC-------CCcccccchhhHHH--HHHHHHHH
Q 018219 192 LTSHIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFF-GR-------NPTIWKLDWNVQFL--TVMYCGVL 261 (359)
Q Consensus 192 l~a~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~--~l~~~g~~ 261 (359)
+++.+||+.+-..+|-..++...| ....|=..++.++...+..+. .. .+..+.......|. ...++|-+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 567889998888877776643222 224444445544433333331 11 11111111111222 22333434
Q ss_pred HHHHHHHHHHHHHhccCcceeeechh-hHHHHHHHHHHHHhcCCCc--chhhHhHHHHhhhhheee
Q 018219 262 NSALVYYLQTWCISVKGPVFTAMFIP-VQLVIVALFSIIAFAERLH--LSSLIGAFFIVAGLYCVL 324 (359)
Q Consensus 262 ~~~~~~~l~~~a~~~~~~~~~s~~~~-~~pv~a~l~~~~~~~e~~~--~~~~~G~~li~~gv~l~~ 324 (359)
.--+++.+..+++...+.+.+-++.. +..+.+..+.++ ++.+.+ ..-+.|.+++++++++-.
T Consensus 81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 44578888999998888776655542 333445555653 444443 345678888888877653
No 137
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=40.89 E-value=1.6e+02 Score=24.08 Aligned_cols=51 Identities=16% Similarity=0.239 Sum_probs=33.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhh-----CCCchhHHHHHHHHHHHHHHHHH
Q 018219 184 WIKGSALILTSHIALSSWLILQAKVFKE-----YPAPLSMNTLICFFASLQTSFLA 234 (359)
Q Consensus 184 ~~~G~~l~l~a~~~~a~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 234 (359)
....+..++.+++.+++..++....++| .+.|..-..+.+..+.+.+..+.
T Consensus 130 f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 130 FLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 5567788889999999888776655543 34555555555555555554443
No 138
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=40.53 E-value=9 Score=30.50 Aligned_cols=26 Identities=12% Similarity=0.153 Sum_probs=18.9
Q ss_pred hccCcceeeechhhHHHHHHHHHHHH
Q 018219 275 SVKGPVFTAMFIPVQLVIVALFSIIA 300 (359)
Q Consensus 275 ~~~~~~~~s~~~~~~pv~a~l~~~~~ 300 (359)
..-+....+.+.|+.|.++++++.++
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667778888888888887755
No 139
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=35.13 E-value=29 Score=27.45 Aligned_cols=13 Identities=23% Similarity=0.674 Sum_probs=5.8
Q ss_pred hHhHHHHhhhhhe
Q 018219 310 LIGAFFIVAGLYC 322 (359)
Q Consensus 310 ~~G~~li~~gv~l 322 (359)
++|..+++.|++.
T Consensus 90 i~g~~~~~~G~~~ 102 (136)
T PF08507_consen 90 IIGLLLFLVGVIY 102 (136)
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 140
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=34.56 E-value=1.4e+02 Score=21.72 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q 018219 188 SALILTSHIALSSWLILQAKVFKE 211 (359)
Q Consensus 188 ~~l~l~a~~~~a~~~i~~~~~~~~ 211 (359)
.+.++.+++.-+-|..+...+.++
T Consensus 63 Av~GlgsalGI~G~q~vE~~lrr~ 86 (89)
T PF04550_consen 63 AVIGLGSALGIAGYQAVEAWLRRR 86 (89)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 366777777777777765555443
No 141
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=33.19 E-value=4.6e+02 Score=25.39 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018219 186 KGSALILTSHIALSSWLILQAKVFKE 211 (359)
Q Consensus 186 ~G~~l~l~a~~~~a~~~i~~~~~~~~ 211 (359)
++....++|..|-++-..+.+...++
T Consensus 351 F~~AYliAa~a~i~Li~~Y~~~vl~~ 376 (430)
T PF06123_consen 351 FNLAYLIAALACIGLISLYLSSVLKS 376 (430)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56667777777877777777777765
No 142
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=32.82 E-value=6.1e+02 Score=26.69 Aligned_cols=44 Identities=16% Similarity=0.083 Sum_probs=27.7
Q ss_pred hhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 018219 99 TVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLF 148 (359)
Q Consensus 99 ~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~ 148 (359)
+.+.++..+.|+-.+.++.....+|.+... +.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~------~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKA------FFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchH------HHHHHHHHHHHHHh
Confidence 455778888999888888877655432222 55555555565544
No 143
>COG2246 Predicted membrane protein [Function unknown]
Probab=32.06 E-value=1.7e+02 Score=23.28 Aligned_cols=60 Identities=10% Similarity=0.134 Sum_probs=37.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccCchhhhhhcchhHHHHHHHHHHhcccccccccc
Q 018219 66 PSFAVMAKIFVLALLGATIHINVYYIGMD--YVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSG 129 (359)
Q Consensus 66 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~--~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~ 129 (359)
...++..++...|..+...+...++.-.+ ..|...+.++. ..+.++..++.+++.+.+++
T Consensus 8 ~~~~~~lrF~~VG~~~t~V~~~~~~ll~~~~~~~~~~A~~~a----~~~~ii~sf~~N~~wTF~~~ 69 (139)
T COG2246 8 FTLSRLLRFAIVGGLGTLVDFAVLWLLVKALGVPYALANAIA----YEAAIIFSFVLNRRWTFRDR 69 (139)
T ss_pred hHHHHHHHHHhcchHHHHHHHHHHHHHHHhcccchHHHHHHH----HHHHHHHHHHHHceeeEeec
Confidence 45688899999999994555444444444 23444444443 34455555667777777775
No 144
>PF15345 TMEM51: Transmembrane protein 51
Probab=31.68 E-value=43 Score=29.02 Aligned_cols=23 Identities=17% Similarity=0.431 Sum_probs=18.6
Q ss_pred hhhHhHHHHhhhhheeeeccCCC
Q 018219 308 SSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 308 ~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
...+|..++++|+++..|.-...
T Consensus 9 L~AiG~Gml~LGiiM~vW~~VPg 31 (233)
T PF15345_consen 9 LTAIGVGMLALGIIMIVWNLVPG 31 (233)
T ss_pred HHHHhHhHHHHhhHheeeeeccc
Confidence 35689999999999999975543
No 145
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=30.50 E-value=3e+02 Score=22.44 Aligned_cols=116 Identities=10% Similarity=0.140 Sum_probs=57.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcc----CCCCC------CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCchh---
Q 018219 34 LNQLVFVVYRHVIAMLLLGPFAYVLER----KQRPK------PSFAVMAKIFVLALLGATIHINVYYIGMDYVSPTV--- 100 (359)
Q Consensus 34 ~~p~~~~~~r~~~a~l~l~~~~~~~~~----~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~--- 100 (359)
++|.++.++..+.-.+.-..+..-... +++|+ .+++.+...+..|..........|+.....-+...
T Consensus 4 l~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~~~~ 83 (182)
T PF00689_consen 4 LTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDEETN 83 (182)
T ss_dssp S-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSSHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 567777777776655543333221000 11121 46778888888888876777777777776322221
Q ss_pred ------hhhhcchhHHHHHHHHHHhccccc---cc--ccccccccchhHHHHHHHHHHHh
Q 018219 101 ------ATALGNVVPSFTFLLAFLLGMEKV---KI--TSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 101 ------~~~l~~~~pi~~~ila~l~~~e~~---~~--~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
+.....+.-++.-++-.+..|.+- .. ..+.++.-+.+++.+++..+++.
T Consensus 84 ~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~ 143 (182)
T PF00689_consen 84 NDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIV 143 (182)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHh
Confidence 344444444444444444444411 11 11123444555555555544444
No 146
>PRK11715 inner membrane protein; Provisional
Probab=30.46 E-value=5.1e+02 Score=25.12 Aligned_cols=26 Identities=8% Similarity=0.013 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018219 186 KGSALILTSHIALSSWLILQAKVFKE 211 (359)
Q Consensus 186 ~G~~l~l~a~~~~a~~~i~~~~~~~~ 211 (359)
++....++|..|-.+-..+.....+.
T Consensus 357 F~~AYliAa~a~v~li~~Y~~~vl~~ 382 (436)
T PRK11715 357 FTLAYLIAALACVLLIGFYLSAVLRS 382 (436)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56667777777777777777766665
No 147
>COG2917 Intracellular septation protein A [Cell division and chromosome partitioning]
Probab=29.12 E-value=2.7e+02 Score=23.11 Aligned_cols=58 Identities=17% Similarity=0.219 Sum_probs=28.1
Q ss_pred HHHHHHhhccCchhhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 018219 87 NVYYIGMDYVSPTVATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTL 150 (359)
Q Consensus 87 ~~~~~al~~~~~~~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~ 150 (359)
..++.+++..+.-.++...-...+....+.++..| ++...+ .+-+.++.+.|..-+.+
T Consensus 11 i~FF~~yk~~~I~~AT~~livAt~i~l~~~w~~~r-kv~km~-----l~s~~~v~vFG~lTl~f 68 (180)
T COG2917 11 ILFFAAYKVYGIYAATAVLIVATVIQLAILWIKYR-KVEKMQ-----LISGVVVVVFGGLTLIF 68 (180)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHH-----HHHHHHHHHhchhHhhc
Confidence 34445555544444444433334555555565554 344444 13444555566665553
No 148
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=29.02 E-value=1.7e+02 Score=24.74 Aligned_cols=43 Identities=9% Similarity=0.048 Sum_probs=24.1
Q ss_pred hhhhhcchhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 018219 100 VATALGNVVPSFTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 100 ~~~~l~~~~pi~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~ 149 (359)
..+++.+..-......-.+..||+++.- +.|.+...++..+..
T Consensus 28 ~~aliaA~~~a~~~~v~RL~r~~~~~~a-------~~gl~gV~i~a~~A~ 70 (187)
T PF11361_consen 28 TPALIAALAVAVVIVVWRLVRRESVQPA-------LSGLFGVAISAAIAW 70 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHH-------HHHHHHHHHHHHHHH
Confidence 3444555555555666677777877654 455554444444443
No 149
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=28.69 E-value=31 Score=26.81 Aligned_cols=17 Identities=12% Similarity=0.132 Sum_probs=7.7
Q ss_pred hHhHHHHhhhhheeeec
Q 018219 310 LIGAFFIVAGLYCVLWG 326 (359)
Q Consensus 310 ~~G~~li~~gv~l~~~~ 326 (359)
++|++++++.+.+..++
T Consensus 74 ~aGvIg~Illi~y~irR 90 (122)
T PF01102_consen 74 MAGVIGIILLISYCIRR 90 (122)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34555555444444333
No 150
>PRK10666 ammonium transporter; Provisional
Probab=26.76 E-value=5.9e+02 Score=24.63 Aligned_cols=24 Identities=8% Similarity=-0.161 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 018219 72 AKIFVLALLGATIHINVYYIGMDY 95 (359)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~~~al~~ 95 (359)
..+..+|.+..-.++..|+-+...
T Consensus 220 ~~~~~lGt~lLw~GW~gFN~Gs~~ 243 (428)
T PRK10666 220 LPMVFTGTAILYIGWFGFNAGSAG 243 (428)
T ss_pred HHHHHHHHHHHHHHHHhccchhhc
Confidence 345566666657777777776654
No 151
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=26.69 E-value=41 Score=22.90 Aligned_cols=20 Identities=30% Similarity=0.157 Sum_probs=11.8
Q ss_pred hHhHHHHhhhhheeeeccCC
Q 018219 310 LIGAFFIVAGLYCVLWGKRK 329 (359)
Q Consensus 310 ~~G~~li~~gv~l~~~~~~~ 329 (359)
++++..+++|.+++....++
T Consensus 7 Li~ICVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 7 LIIICVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 45666667776666544333
No 152
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=26.67 E-value=1.9e+02 Score=18.85 Aligned_cols=44 Identities=20% Similarity=0.355 Sum_probs=31.3
Q ss_pred chhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018219 135 VLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKE 211 (359)
Q Consensus 135 ~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~ 211 (359)
++|..+.++|++++..+. .|.+..+++-...|...-..|+..+.
T Consensus 6 v~G~~lv~~Gii~~~lPG---------------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 6 VLGWVLVVAGIIMLPLPG---------------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hHHHHHHHHHHHhhcCCC---------------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 788889999998886321 35566677777777777777776554
No 153
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=26.51 E-value=3.4e+02 Score=21.75 Aligned_cols=30 Identities=10% Similarity=0.068 Sum_probs=24.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018219 182 ENWIKGSALILTSHIALSSWLILQAKVFKE 211 (359)
Q Consensus 182 ~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~ 211 (359)
.+.....+..+++++.|.-|...+||..+.
T Consensus 117 ~~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 117 AEAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 344578889999999999999999987653
No 154
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=24.60 E-value=52 Score=20.03 Aligned_cols=18 Identities=33% Similarity=0.864 Sum_probs=10.7
Q ss_pred HhHHHHhhhhheeeeccC
Q 018219 311 IGAFFIVAGLYCVLWGKR 328 (359)
Q Consensus 311 ~G~~li~~gv~l~~~~~~ 328 (359)
+|.++++.+.+++.++++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 455666666666655544
No 155
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=22.73 E-value=3.8e+02 Score=25.99 Aligned_cols=125 Identities=8% Similarity=0.103 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccchhhHHHHHHHHHHHHH----HHHHHHH
Q 018219 195 HIALSSWLILQAKVFKEYPAPLSMNTLICFFASLQTSFLALFFGRNPTIWKLDWNVQFLTVMYCGVLNS----ALVYYLQ 270 (359)
Q Consensus 195 ~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~----~~~~~l~ 270 (359)
.+.|++.-.....+.++ .+|-..+....+.++++.+.+... + +-........+.|.+.+ ..+-.+.
T Consensus 74 ~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gfs------~---s~~~~~~l~~lng~fQg~Gwpp~~~~i~ 143 (448)
T COG2271 74 SITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGFS------P---SLFLFAVLWVLNGWFQGMGWPPCARTIT 143 (448)
T ss_pred HHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhhh------h---HHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 45566666666666666 466556666666666555544441 1 10111122222222211 1112223
Q ss_pred HHHHhccCcceeeech-------hhHHHHHHHHHHHHhcC-CCcchhhHhHHHHhhhhheeeeccCCC
Q 018219 271 TWCISVKGPVFTAMFI-------PVQLVIVALFSIIAFAE-RLHLSSLIGAFFIVAGLYCVLWGKRKD 330 (359)
Q Consensus 271 ~~a~~~~~~~~~s~~~-------~~~pv~a~l~~~~~~~e-~~~~~~~~G~~li~~gv~l~~~~~~~~ 330 (359)
.+--++..-+..+.-. .+-|.++.+ +++.++- .-...-..|++.+++|+++..+.|.++
T Consensus 144 ~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 144 HWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3333444444444433 344455444 5544442 233345678888888888876555443
No 156
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=22.06 E-value=5.6e+02 Score=24.53 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccC-cceeeechhhHHHHHHHHHHHHhcCCCcchhhHhHHHHhhhhheeeeccCC
Q 018219 251 QFLTVMYCGVLNSALVYYLQTWCISVKG-PVFTAMFIPVQLVIVALFSIIAFAERLHLSSLIGAFFIVAGLYCVLWGKRK 329 (359)
Q Consensus 251 ~~~~l~~~g~~~~~~~~~l~~~a~~~~~-~~~~s~~~~~~pv~a~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 329 (359)
....+.-++.....+.|.+...+.-+.. +..-......-+.++.++..+.+.. ..+..++..+.+.++.+..+.+++
T Consensus 350 ~~~~l~~~~~~~~l~~y~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 427 (435)
T PRK10435 350 LFGELTGIAVLLTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMG--ASSFELAGTFIVSLIILMFYARKM 427 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444454555556665554442222 2111122234445555555544432 234455666666666665555554
Q ss_pred CCcc
Q 018219 330 DSLA 333 (359)
Q Consensus 330 ~~~~ 333 (359)
.+++
T Consensus 428 ~~~~ 431 (435)
T PRK10435 428 HERQ 431 (435)
T ss_pred cchh
Confidence 4443
No 157
>COG4854 Predicted membrane protein [Function unknown]
Probab=21.80 E-value=2.7e+02 Score=21.20 Aligned_cols=51 Identities=16% Similarity=0.201 Sum_probs=33.8
Q ss_pred ccchhHHHHHHHHHHHhhhccCcccccccccccccccCCCcccccccCccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018219 133 AKVLGTIICVGGSLLFTLWRSGYLFKSVVEKPLINIYNNNADHLRHHGKENWIKGSALILTSHIALSSWLILQAKVFKE 211 (359)
Q Consensus 133 ~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~i~~~~~~~~ 211 (359)
.+++.+..++.|.+++.+ +.+.. ...+..+-+..+....+|..+.....++
T Consensus 73 iqV~~is~Al~gavl~a~-knP~~---------------------------~~a~~al~~A~ca~ivLy~~fY~YYsrr 123 (126)
T COG4854 73 IQVFSISAALGGAVLLAL-KNPLH---------------------------TNAAFALEFAVCAVIVLYLAFYMYYSRR 123 (126)
T ss_pred EEEEEehHHHHHHHHHHh-cCccc---------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458889999999998874 32222 2356666666666667777766665554
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=21.49 E-value=7.2e+02 Score=24.00 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=6.7
Q ss_pred hHhHHHHhhhhhee
Q 018219 310 LIGAFFIVAGLYCV 323 (359)
Q Consensus 310 ~~G~~li~~gv~l~ 323 (359)
+.|+..++++++..
T Consensus 417 ~~~~~~~i~~~~~~ 430 (476)
T PLN00028 417 LMGVMIIACTLPVA 430 (476)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555555544443
No 159
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=20.80 E-value=7.7e+02 Score=23.82 Aligned_cols=35 Identities=11% Similarity=-0.048 Sum_probs=18.2
Q ss_pred HHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcc
Q 018219 111 FTFLLAFLLGMEKVKITSGRGRAKVLGTIICVGGSLLFTLWRS 153 (359)
Q Consensus 111 ~~~ila~l~~~e~~~~~~~~~~~~~ig~~l~~~Gv~l~~~~~~ 153 (359)
+..+++.++.+-|..-. ---+.+-+|+.++.+.-+
T Consensus 6 ~~~~~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~ 40 (433)
T PRK09412 6 LIIVLLAIFLGARLGGI--------GIGFAGGLGVLILTFIFG 40 (433)
T ss_pred HHHHHHHHHHhHhhhHH--------HHHHHHHHHHHHHHHhcC
Confidence 34566667777664222 122234566666665433
No 160
>PRK10263 DNA translocase FtsK; Provisional
Probab=20.67 E-value=1.2e+03 Score=26.21 Aligned_cols=18 Identities=17% Similarity=0.100 Sum_probs=11.6
Q ss_pred cccchhHHHHHHHHHHHh
Q 018219 132 RAKVLGTIICVGGSLLFT 149 (359)
Q Consensus 132 ~~~~ig~~l~~~Gv~l~~ 149 (359)
..+..++++.+++++++.
T Consensus 22 L~E~~gIlLlllAlfL~l 39 (1355)
T PRK10263 22 LLEALLILIVLFAVWLMA 39 (1355)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344677777777766653
Done!