Query 018221
Match_columns 359
No_of_seqs 258 out of 1848
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 11:50:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 8.5E-86 2.9E-90 636.6 27.7 334 13-348 3-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 2.1E-80 7.1E-85 590.4 20.5 297 52-355 3-307 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 5.1E-78 1.8E-82 573.1 25.1 291 51-342 5-309 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 2.9E-75 1E-79 553.6 16.1 278 51-343 3-306 (311)
5 1odm_A Isopenicillin N synthas 100.0 1.8E-73 6.3E-78 545.8 24.4 280 51-342 7-324 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.8E-69 6.3E-74 506.3 24.0 260 51-342 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.7 0.03 1E-06 50.3 8.0 105 182-304 74-194 (243)
8 2rg4_A Uncharacterized protein 93.7 0.66 2.3E-05 40.6 11.5 43 253-307 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 92.1 0.31 1.1E-05 43.6 7.0 182 68-304 15-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 87.0 1.9 6.5E-05 37.6 7.9 88 208-305 99-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 85.6 2.3 7.9E-05 37.1 7.6 104 182-304 94-211 (216)
12 3s57_A Alpha-ketoglutarate-dep 81.0 3.3 0.00011 35.7 6.6 81 207-302 100-200 (204)
13 2iuw_A Alkylated repair protei 80.5 3.5 0.00012 36.5 6.8 84 207-303 126-228 (238)
14 3i3q_A Alpha-ketoglutarate-dep 72.1 6.7 0.00023 34.0 6.0 80 207-303 105-201 (211)
15 3tht_A Alkylated DNA repair pr 61.4 7.1 0.00024 36.5 4.3 94 206-307 197-315 (345)
16 2opi_A L-fuculose-1-phosphate 48.9 9.3 0.00032 32.9 2.7 36 52-89 125-160 (212)
17 2dbn_A Hypothetical protein YB 46.1 7.1 0.00024 37.8 1.5 53 51-106 99-151 (461)
18 4ay7_A Methylcobalamin\: coenz 42.7 50 0.0017 30.3 6.9 46 61-106 298-348 (348)
19 3rcq_A Aspartyl/asparaginyl be 41.7 47 0.0016 28.2 6.0 68 224-308 113-187 (197)
20 2fk5_A Fuculose-1-phosphate al 41.4 16 0.00055 31.1 3.0 36 52-89 117-153 (200)
21 1e4c_P L-fuculose 1-phosphate 41.4 14 0.00049 31.7 2.7 36 52-89 122-157 (215)
22 1otj_A Alpha-ketoglutarate-dep 41.2 25 0.00087 31.2 4.5 51 51-106 16-66 (283)
23 3o2g_A Gamma-butyrobetaine dio 39.2 14 0.00048 34.9 2.5 52 52-107 122-173 (388)
24 3kt7_A PKHD-type hydroxylase T 39.0 70 0.0024 32.1 7.4 105 182-307 105-231 (633)
25 1pvt_A Sugar-phosphate aldolas 38.9 18 0.00063 31.6 3.0 37 51-89 160-196 (238)
26 3ghf_A Septum site-determining 34.7 30 0.001 26.9 3.3 40 55-96 51-91 (120)
27 1oih_A Putative alkylsulfatase 34.2 39 0.0013 30.4 4.5 52 51-107 26-78 (301)
28 2da7_A Zinc finger homeobox pr 33.9 14 0.00047 26.2 1.0 41 164-204 15-55 (71)
29 3pvj_A Alpha-ketoglutarate-dep 33.9 39 0.0013 30.1 4.5 52 51-107 14-65 (277)
30 2v9l_A Rhamnulose-1-phosphate 33.3 20 0.00067 32.2 2.3 36 52-89 179-214 (274)
31 1e5r_A Proline oxidase; oxidor 31.9 33 0.0011 31.2 3.5 65 225-303 103-175 (290)
32 3ocr_A Class II aldolase/adduc 30.8 28 0.00096 31.2 2.9 37 52-89 156-192 (273)
33 2x4k_A 4-oxalocrotonate tautom 26.9 47 0.0016 21.5 2.9 22 175-196 18-39 (63)
34 3r1j_A Alpha-ketoglutarate-dep 26.9 64 0.0022 29.2 4.6 52 51-107 20-72 (301)
35 1m5a_B Insulin B chain; alpha 26.4 63 0.0022 18.7 2.8 17 67-83 10-26 (30)
36 3abf_A 4-oxalocrotonate tautom 26.1 61 0.0021 21.2 3.4 23 175-197 16-38 (64)
37 2ww6_A Fibritin, T4 fibritin; 24.3 35 0.0012 19.0 1.4 13 247-259 12-24 (27)
38 2irp_A Putative aldolase class 23.8 32 0.0011 29.2 1.9 35 52-89 139-176 (208)
39 2z7b_A MLR6791 protein; class 23.8 53 0.0018 29.3 3.4 38 52-89 157-201 (270)
40 2opa_A Probable tautomerase YW 22.8 63 0.0021 20.9 2.9 22 175-196 15-36 (61)
41 1otf_A 4-oxalocrotonate tautom 21.9 78 0.0027 20.4 3.2 22 175-196 15-36 (62)
42 2vf9_A Coat protein; virion, R 20.8 17 0.0006 26.9 -0.4 17 273-289 49-65 (131)
43 1y66_A Engrailed homeodomain; 20.8 72 0.0025 19.9 2.5 41 164-204 7-47 (52)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=8.5e-86 Score=636.64 Aligned_cols=334 Identities=31% Similarity=0.597 Sum_probs=300.4
Q ss_pred CcccHHHHHhcCCCCCCCCCccCCCCCCCCCCCC--CC---CCCCcceEeCCCCCCCCH----HHHHHHHHHHhhcCeEE
Q 018221 13 VEPSILDLANNQPLTTVPPRFVRLEIDHPLIRND--DT---STQQLPVIDMHRLLSGDD----SELEKLDNTCKEWGFFQ 83 (359)
Q Consensus 13 ~~~~v~~l~~~~~~~~~p~~yv~~~~~~~~~~~~--~~---~~~~iPvIDls~l~~~~~----~~~~~l~~A~~~~GfF~ 83 (359)
++++||+|+++ ++++||++|++|+++++.+... .. ...+||||||+.+.+++. +.+++|.+||++|||||
T Consensus 3 ~~~~v~~l~~~-~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~ 81 (356)
T 1gp6_A 3 AVERVESLAKS-GIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH 81 (356)
T ss_dssp CCCCHHHHHHT-TCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred CcccHHHHHhc-CCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence 45679999999 8999999999998887753220 00 123699999999876554 26799999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHhhhhCCCHHHHhhccCCC--CCccccccCCCCCcccccCcccccccccCCCCCCCCCCCCCC
Q 018221 84 LINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQP--GDSEGFGQHFIASEEQKLDWGYGFTMVTLPTHLRKPHLFPKL 161 (359)
Q Consensus 84 v~nhGv~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~ 161 (359)
|+||||+.++++++++.+++||+||.|+|+++.... ..++||+........++.||+|.|++...|......|.||+.
T Consensus 82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161 (356)
T ss_dssp EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence 999999999999999999999999999999998754 368999877655556788999999998766544567999999
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHCCCChhhHHHHhh---ccceeeeeeccCCCCCCCCccccccccCCCceeEE
Q 018221 162 PLPFRDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFE---NGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVL 238 (359)
Q Consensus 162 ~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~~lTlL 238 (359)
++.||+.+++|+++|.+|+.+||++|+++||+++++|.+.+. ...+.||+||||||++++..+|+++|||+|+||||
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 999999999999999999999999999999999999999987 46788999999999999999999999999999999
Q ss_pred EecCCCCCcceecCCeEEEecCCCCeEEEEecccchhccCCcccCccccccCCCCCccceeEeeecCCCCc-eeecCccc
Q 018221 239 LQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSPKLDG-ELGPATSL 317 (359)
Q Consensus 239 ~q~~~~~GLqV~~~g~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~pl~~~ 317 (359)
+| |+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||+++++++|||++||++|+.|+ +|+|+++|
T Consensus 242 ~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~ 320 (356)
T 1gp6_A 242 LH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM 320 (356)
T ss_dssp EE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred EE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence 99 67999999999999999999999999999999999999999999999999889999999999999999 99999999
Q ss_pred cCCCCCCCCCcccHHHHHHHHHhccCCCCcc
Q 018221 318 IAPKTPALFKRISVVDHLKIFFSSELRGKSF 348 (359)
Q Consensus 318 v~~~~p~~y~~~~~~ey~~~~~~~~~~g~~~ 348 (359)
+++++|++|+++|++||++.+++++++|+..
T Consensus 321 ~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 321 VSVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp CCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred cCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 9999999999999999999999888776543
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.1e-80 Score=590.38 Aligned_cols=297 Identities=26% Similarity=0.568 Sum_probs=265.2
Q ss_pred CcceEeCCCCCCCCH-HHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhCCCHHHHhhccCCCCCccccccCCC
Q 018221 52 QLPVIDMHRLLSGDD-SELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFI 130 (359)
Q Consensus 52 ~iPvIDls~l~~~~~-~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~~~~ 130 (359)
+||||||+.+...+. +++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||+...
T Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~- 78 (319)
T 1w9y_A 3 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQ- 78 (319)
T ss_dssp CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCC-
T ss_pred CCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCccc-
Confidence 599999998853333 5779999999999999999999999999999999999999999999998643 34786542
Q ss_pred CCcccccCcccccccccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHCCCChhhHHHHhhc---cce
Q 018221 131 ASEEQKLDWGYGFTMVTLPTHLRKPHLFPKLPLPFRDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFEN---GMQ 207 (359)
Q Consensus 131 ~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~---~~~ 207 (359)
.+.++.||+|.|++...|. ...|.||+.++.||+.+++|+++|.+|+.+||++|+++||+++++|.+.+.+ ..+
T Consensus 79 -~e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~ 155 (319)
T 1w9y_A 79 -AEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNF 155 (319)
T ss_dssp -CCGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEE
T ss_pred -ccCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccc
Confidence 3356789999999887653 3468999999999999999999999999999999999999999999998874 467
Q ss_pred eeeeeccCCCCCCCCccccccccCCCceeEEEecCCCCCcceecCCeEEEecCCCCeEEEEecccchhccCCcccCcccc
Q 018221 208 AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 287 (359)
Q Consensus 208 ~lrl~~YPp~~~~~~~~g~~~HtD~~~lTlL~q~~~~~GLqV~~~g~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HR 287 (359)
.+|+||||||++++..+|+++|||+|+||||+||++++||||+++|+|++|+|+||++||||||+||+||||+|||++||
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HR 235 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHR 235 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEE
T ss_pred eeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccce
Confidence 89999999999999999999999999999999955799999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccceeEeeecCCCCceeecCccccCCC---CCCCCCcccHHHHHHHHHhccCCCCcc-ccccccc
Q 018221 288 ATVNSVKERLSLATFYSPKLDGELGPATSLIAPK---TPALFKRISVVDHLKIFFSSELRGKSF-VDFLRIQ 355 (359)
Q Consensus 288 Vv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~---~p~~y~~~~~~ey~~~~~~~~~~g~~~-~~~~~~~ 355 (359)
|+++++++|||++||++|+.|++|.|+++|++++ +|++|++++++||++.++++.+.|+.. ++.+|+.
T Consensus 236 Vv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 236 VIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp ECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred ecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 9999889999999999999999999999999988 699999999999999999999888865 6777764
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=5.1e-78 Score=573.11 Aligned_cols=291 Identities=22% Similarity=0.371 Sum_probs=257.5
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhCCCHHHHhhccCCCCCccccccCCC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFI 130 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~~~~ 130 (359)
.+||||||+.+.++..+.+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||.....
T Consensus 5 ~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~ 84 (312)
T 3oox_A 5 SAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGV 84 (312)
T ss_dssp CSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCC
T ss_pred CCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccc
Confidence 46999999987553346789999999999999999999999999999999999999999999999875455789965433
Q ss_pred CC--cccccCcccccccccC-CC-----CCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHCCCChhhHHHHh
Q 018221 131 AS--EEQKLDWGYGFTMVTL-PT-----HLRKPHLFPKLPLPFRDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF 202 (359)
Q Consensus 131 ~~--~~~~~d~~e~~~~~~~-p~-----~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~ 202 (359)
.. .....||+|.|.+... +. ....+|.||+.+++||+++++|+++|.+|+.+|+++|+++||+++++|.+.+
T Consensus 85 e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 164 (312)
T 3oox_A 85 ETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTV 164 (312)
T ss_dssp CCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHH
T ss_pred eecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHh
Confidence 22 2346899999887542 11 1134689999999999999999999999999999999999999999999999
Q ss_pred hccceeeeeeccCCCCCCCCccccccccCCCceeEEEecCCCCCccee-cCCeEEEecCCCCeEEEEecccchhccCCcc
Q 018221 203 ENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIK-KDGKWVAVKPLPDAFVVNIGDVLEILTNGTY 281 (359)
Q Consensus 203 ~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~~lTlL~q~~~~~GLqV~-~~g~W~~V~p~pg~~vVniGD~l~~~SnG~~ 281 (359)
.++.+.+|+||||||++++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|+||++||||||+||+||||+|
T Consensus 165 ~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~ 243 (312)
T 3oox_A 165 QDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVL 243 (312)
T ss_dssp TTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSS
T ss_pred cCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCee
Confidence 88888999999999998766699999999999999999 689999996 5899999999999999999999999999999
Q ss_pred cCccccccCCC----CCccceeEeeecCCCCceeecCccccCCCCCCCCC-cccHHHHHHHHHhcc
Q 018221 282 PSIEHRATVNS----VKERLSLATFYSPKLDGELGPATSLIAPKTPALFK-RISVVDHLKIFFSSE 342 (359)
Q Consensus 282 kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~-~~~~~ey~~~~~~~~ 342 (359)
||++|||+.++ .++|||++||++|+.|++|+|+++|+++++|++|+ +++++||+..+++..
T Consensus 244 kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 244 PSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp CCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred cCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 99999998653 45799999999999999999999999999999999 999999999988753
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2.9e-75 Score=553.57 Aligned_cols=278 Identities=18% Similarity=0.248 Sum_probs=238.2
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhCCC-HHHHhhccCCC-CCccccccC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLP-IDEKKKFWQQP-GDSEGFGQH 128 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~lP-~eeK~~~~~~~-~~~~Gy~~~ 128 (359)
.+||||||+.+.+++.+ ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++.... ...+||+..
T Consensus 3 ~~iPvIDls~l~~~~~~--~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~ 80 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ--DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGL 80 (311)
T ss_dssp CCCCEEEHHHHHTTCSH--HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC
T ss_pred CCCcEEEchhhcCCCHH--HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeec
Confidence 46999999987554433 399999999999999999999999999999999999999 99999998764 567999875
Q ss_pred CCC------CcccccCcccccccccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHCCC----ChhhH
Q 018221 129 FIA------SEEQKLDWGYGFTMVTLPTHLRKPHLFPKLPLPFRDDLEVYSTEIKNLTLKILDQMAKALRM----DPNDM 198 (359)
Q Consensus 129 ~~~------~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl----~~~~~ 198 (359)
... ...+..||+|.|++... +|.|| ++.||+.+++|+++|.+|+.+|+++|+++||+ ++++|
T Consensus 81 ~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f 152 (311)
T 1dcs_A 81 ESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAF 152 (311)
T ss_dssp -----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHH
T ss_pred cccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHH
Confidence 433 22467899999998754 57899 89999999999999999999999999999999 88888
Q ss_pred HHHhhccceeeeeeccCCCCCCC--C--ccccccccCCCceeEEEecCCCCC---cceecCCeEEEecCCCCeEEEEecc
Q 018221 199 EELFENGMQAFRMNYYPPCLQPE--K--VVGHNSHCDASALTVLLQINEMDG---LQIKKDGKWVAVKPLPDAFVVNIGD 271 (359)
Q Consensus 199 ~~~~~~~~~~lrl~~YPp~~~~~--~--~~g~~~HtD~~~lTlL~q~~~~~G---LqV~~~g~W~~V~p~pg~~vVniGD 271 (359)
.+. .+.+|+||||||++++ . .+|+++|||+|+||||+|+++++| |||+++|+|++|+|+||+|||||||
T Consensus 153 ~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD 228 (311)
T 1dcs_A 153 LDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGA 228 (311)
T ss_dssp HSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECH
T ss_pred hhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHH
Confidence 765 6789999999999874 3 688999999999999999437999 9999999999999999999999999
Q ss_pred cchhccCCcccCccccccCCC-----CCccceeEeeecCCCCceeecCccccCCCCCCCC--CcccHHHHHHHHHhccC
Q 018221 272 VLEILTNGTYPSIEHRATVNS-----VKERLSLATFYSPKLDGELGPATSLIAPKTPALF--KRISVVDHLKIFFSSEL 343 (359)
Q Consensus 272 ~l~~~SnG~~kS~~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y--~~~~~~ey~~~~~~~~~ 343 (359)
+||+||||+|||++|||++++ .++|||++||++|+.|++|. +++++++++|++| ++++++||++.++++.+
T Consensus 229 ~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 229 IATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 999999999999999999987 67999999999999999999 9999999999999 99999999987766654
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.8e-73 Score=545.84 Aligned_cols=280 Identities=22% Similarity=0.281 Sum_probs=251.4
Q ss_pred CCcceEeCCCCCCCCH----HHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhh-hCCCHHHHhhccCCCCCcccc
Q 018221 51 QQLPVIDMHRLLSGDD----SELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDF-FNLPIDEKKKFWQQPGDSEGF 125 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~----~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~f-F~lP~eeK~~~~~~~~~~~Gy 125 (359)
.+||||||+.|.+++. +.+++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy 78 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAY 78 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCC
Confidence 5699999999876654 36799999999999999999999 899999999999 9999999999976 566
Q ss_pred ccCCCC--Ccc------cccCcccccccccCCCC----------CCCCCCCCCC--CcchhhhHHHHHHHHHHHHHHHHH
Q 018221 126 GQHFIA--SEE------QKLDWGYGFTMVTLPTH----------LRKPHLFPKL--PLPFRDDLEVYSTEIKNLTLKILD 185 (359)
Q Consensus 126 ~~~~~~--~~~------~~~d~~e~~~~~~~p~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~la~~ll~ 185 (359)
...... ..+ +..||+|.|++...... ...+|.||+. +++||+++++|+++|.+|+.+|++
T Consensus 79 ~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~ 158 (331)
T 1odm_A 79 NKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLK 158 (331)
T ss_dssp CTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 543221 112 57899999998753210 2357899998 999999999999999999999999
Q ss_pred HHHHHCCCChhhHHHHhhccceeee--eeccC------C---CCCCCC-ccccccccCCCceeEEEecCCCCCccee-cC
Q 018221 186 QMAKALRMDPNDMEELFENGMQAFR--MNYYP------P---CLQPEK-VVGHNSHCDASALTVLLQINEMDGLQIK-KD 252 (359)
Q Consensus 186 ~l~~~Lgl~~~~~~~~~~~~~~~lr--l~~YP------p---~~~~~~-~~g~~~HtD~~~lTlL~q~~~~~GLqV~-~~ 252 (359)
+|+++||+++++|.+.+.+..+.+| +|||| | |++++. .+|+++|||+|+||||+| |+++||||+ ++
T Consensus 159 ~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~~ 237 (331)
T 1odm_A 159 GYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SNVQNLQVETAA 237 (331)
T ss_dssp HHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CSSCCEEEEETT
T ss_pred HHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee-CCCCCEEEEcCC
Confidence 9999999999999999988888999 99999 8 888887 899999999999999999 679999999 68
Q ss_pred CeEEEecCCCCeEEEEecccchhccCCcccCccccccCCCCCccceeEeeecCCCCceeecCccccCCCCCCCCCcccHH
Q 018221 253 GKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSPKLDGELGPATSLIAPKTPALFKRISVV 332 (359)
Q Consensus 253 g~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ 332 (359)
| |++|+|+||+|||||||+||+||||+|||++|||+. ++++|||++||++|+.|++|+|+++++++++ ++|++++++
T Consensus 238 g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~ 314 (331)
T 1odm_A 238 G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYG 314 (331)
T ss_dssp E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHH
T ss_pred C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHH
Confidence 8 999999999999999999999999999999999985 5789999999999999999999999999888 999999999
Q ss_pred HHHHHHHhcc
Q 018221 333 DHLKIFFSSE 342 (359)
Q Consensus 333 ey~~~~~~~~ 342 (359)
||++.++++.
T Consensus 315 e~l~~~~~~~ 324 (331)
T 1odm_A 315 DYLQNGLVSL 324 (331)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988766
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.8e-69 Score=506.33 Aligned_cols=260 Identities=26% Similarity=0.383 Sum_probs=226.1
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhCCCHHHHhhccCCCCCccccccCC-
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHF- 129 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~~~- 129 (359)
++||||||+.. +++++|.+||++||||||+||||+.++++++++.+++||++ |+|+++...++..+||....
T Consensus 2 ~~IPvIDls~~-----~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~ 74 (280)
T 3on7_A 2 MKLETIDYRAA-----DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASI 74 (280)
T ss_dssp --CCEEETTST-----THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC-
T ss_pred CCCCEEECCCh-----hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcc
Confidence 46999999964 46899999999999999999999999999999999999998 89999987666789997643
Q ss_pred CCC--cccccCcccccccccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHCCCCh--hh---HHHHh
Q 018221 130 IAS--EEQKLDWGYGFTMVTLPTHLRKPHLFPKLPLPFRDDLEVYSTEIKNLTLKILDQMAKALRMDP--ND---MEELF 202 (359)
Q Consensus 130 ~~~--~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---~~~~~ 202 (359)
... .....||+|.|.+. .||..|+.||+++++|+++|.+|+.+||++|+++||++. ++ |.+.+
T Consensus 75 ~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~ 144 (280)
T 3on7_A 75 SETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMI 144 (280)
T ss_dssp -------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHH
T ss_pred ccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHh
Confidence 111 22367999988763 378888999999999999999999999999999999863 22 56666
Q ss_pred hccc-eeeeeeccCCCCCCC--CccccccccCCCceeEEEecCCCCCccee-cCCeEEEecCCCCeEEEEecccchhccC
Q 018221 203 ENGM-QAFRMNYYPPCLQPE--KVVGHNSHCDASALTVLLQINEMDGLQIK-KDGKWVAVKPLPDAFVVNIGDVLEILTN 278 (359)
Q Consensus 203 ~~~~-~~lrl~~YPp~~~~~--~~~g~~~HtD~~~lTlL~q~~~~~GLqV~-~~g~W~~V~p~pg~~vVniGD~l~~~Sn 278 (359)
.+.. +.+|+||||||++++ ..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|+||++||||||+||+|||
T Consensus 145 ~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 223 (280)
T 3on7_A 145 ANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPT-ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASD 223 (280)
T ss_dssp TTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEEC-CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTT
T ss_pred cCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEe-cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhC
Confidence 6554 889999999999765 5799999999999999999 689999999 5899999999999999999999999999
Q ss_pred CcccCccccccCCC----CCccceeEeeecCCCCceeecCccccCCCCCCCCCcccHHHHHHHHHhcc
Q 018221 279 GTYPSIEHRATVNS----VKERLSLATFYSPKLDGELGPATSLIAPKTPALFKRISVVDHLKIFFSSE 342 (359)
Q Consensus 279 G~~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~ 342 (359)
|+|||++|||+.++ .++|||++||++|+.|++|+| ++|++||+..+++..
T Consensus 224 g~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 224 GYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred CcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 99999999998763 468999999999999999975 589999999998764
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.69 E-value=0.03 Score=50.28 Aligned_cols=105 Identities=19% Similarity=0.149 Sum_probs=64.1
Q ss_pred HHHHHHHHHCCCChhhHHHHhhccceeeeeeccCCCCCCCCccccccccCCC-----------ceeEEEecCC----CCC
Q 018221 182 KILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDAS-----------ALTVLLQINE----MDG 246 (359)
Q Consensus 182 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~----~~G 246 (359)
.|.+.|...|+..+.++...+.....-+++++|.+-. -..+|.|.. .+|+++.-++ .||
T Consensus 74 ~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GG 147 (243)
T 3dkq_A 74 ALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGG 147 (243)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEEC
T ss_pred HHHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCc
Confidence 3334444444444333332233334568899998732 246777753 5677766333 233
Q ss_pred -cceecCCeEEEecCCCCeEEEEecccchhccCCcccCccccccCCCCCccceeEeeec
Q 018221 247 -LQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYS 304 (359)
Q Consensus 247 -LqV~~~g~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~ 304 (359)
|.+.....=..|+|..|.+|+.-. .++|+|..-....|++++.+++
T Consensus 148 etvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 148 ELVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp CEEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred eEEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 555544344789999999999743 3689997544568999998875
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.75 E-value=0.66 Score=40.57 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=33.8
Q ss_pred CeEEEecCCCCeEEEEecccchhccCCcccCccccccCCC-CCccceeEeeecCCC
Q 018221 253 GKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS-VKERLSLATFYSPKL 307 (359)
Q Consensus 253 g~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HRVv~~~-~~~R~Si~~F~~P~~ 307 (359)
..++.|.|.+|.+||.-+.+ .|+|..+. +++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 46778999999999987653 69998764 468999999998765
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=92.10 E-value=0.31 Score=43.61 Aligned_cols=182 Identities=18% Similarity=0.257 Sum_probs=99.5
Q ss_pred HHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhCCCHHHHhhccCCCCCccccccCCCCC--cccccCccccccc
Q 018221 68 ELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIAS--EEQKLDWGYGFTM 145 (359)
Q Consensus 68 ~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~~~~~~--~~~~~d~~e~~~~ 145 (359)
..+.|.+++.+.|++++-| =++++.++.+.+.++.+-+ .-.+.. +. .|-....... ......|.+
T Consensus 15 ~~~~i~~~L~~~g~~Vid~-fLs~ee~~~L~~~~~~~~~-----~g~~~~--a~-i~~~~~~~~~~iR~d~i~wl~---- 81 (247)
T 2hbt_A 15 ALEYIVPCMNKHGICVVDD-FLGKETGQQIGDEVRALHD-----TGKFTD--GQ-LVSQKSDSSKDIRGDKITWIE---- 81 (247)
T ss_dssp HHHTHHHHHHHTSEEEESS-SSCHHHHHHHHHHHHHHHH-----TTCSCS--CC-EEECCSSSTTCEECCEEEEEC----
T ss_pred hHHHHHHHhccCCEEEECC-CCCHHHHHHHHHHHHhhhh-----cCCccc--cc-cccccccccccccccceeeec----
Confidence 3477999999999887554 4899999999988877431 000111 10 1100000000 000111111
Q ss_pred ccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHCCCChhhHHHHhhccceeeeeeccCCCCCCCCccc
Q 018221 146 VTLPTHLRKPHLFPKLPLPFRDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVG 225 (359)
Q Consensus 146 ~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g 225 (359)
+ .. ...+.+..|.+.|.++.. .+...||+.. . ....-+.+.+|++. .-.
T Consensus 82 ---~----------~~--~~~~~~~~l~~~i~~l~~----~ln~~lGl~~------i-~~~~e~~~~~Y~~~-----G~~ 130 (247)
T 2hbt_A 82 ---G----------KE--PGCETIGLLMSSMDDLIR----HCNGKLGSYK------I-NGRTKAMVACYPGN-----GTG 130 (247)
T ss_dssp ---S----------CS--TTCHHHHHHHHHHHHHHH----HTTTTSTTCC------E-EEECCEEEEEECSS-----SCC
T ss_pred ---c----------cc--cchhHHHHHHHHHHHHHH----HHhhhcCccc------c-cccceEEEEEecCC-----CCc
Confidence 0 00 011223345555554433 2222344321 0 01233667888861 124
Q ss_pred cccccCCC-----ceeEEEecCC------CCC-cceecCC--eEEEecCCCCeEEEEecccchhccCCcccCccccccCC
Q 018221 226 HNSHCDAS-----ALTVLLQINE------MDG-LQIKKDG--KWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 291 (359)
Q Consensus 226 ~~~HtD~~-----~lTlL~q~~~------~~G-LqV~~~g--~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HRVv~~ 291 (359)
..+|.|.. .+|+++.-++ .|| |.+..++ ....|.|..|.+|+.-.+. -.+|.|..
T Consensus 131 y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p- 199 (247)
T 2hbt_A 131 YVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP- 199 (247)
T ss_dssp EEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-
T ss_pred ccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-
Confidence 56788773 6888887433 144 6777644 6789999999999987542 15899865
Q ss_pred CCCccceeEeeec
Q 018221 292 SVKERLSLATFYS 304 (359)
Q Consensus 292 ~~~~R~Si~~F~~ 304 (359)
..+.|+||+..+.
T Consensus 200 ~~~~R~sit~W~~ 212 (247)
T 2hbt_A 200 AYATRYAITVWYF 212 (247)
T ss_dssp BSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEEc
Confidence 5678999988764
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=86.96 E-value=1.9 Score=37.56 Aligned_cols=88 Identities=16% Similarity=0.244 Sum_probs=54.9
Q ss_pred eeeeeccCCCCCCCCccccccccCC--------------CceeEEEecCC--CCC-cceecCC-------------eEEE
Q 018221 208 AFRMNYYPPCLQPEKVVGHNSHCDA--------------SALTVLLQINE--MDG-LQIKKDG-------------KWVA 257 (359)
Q Consensus 208 ~lrl~~YPp~~~~~~~~g~~~HtD~--------------~~lTlL~q~~~--~~G-LqV~~~g-------------~W~~ 257 (359)
-+++++|.+-. ...+|.|. ..+|+|+.-++ .|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47788887722 24566664 24788876433 344 3322211 2489
Q ss_pred ecCCCCeEEEEecccchhccCCcc-cCccccccCCCCCccceeEeeecC
Q 018221 258 VKPLPDAFVVNIGDVLEILTNGTY-PSIEHRATVNSVKERLSLATFYSP 305 (359)
Q Consensus 258 V~p~pg~~vVniGD~l~~~SnG~~-kS~~HRVv~~~~~~R~Si~~F~~P 305 (359)
|+|..|.+|+.-- ...||.. ..++|+|..-....|+++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999988753 1233432 578999865445689999888753
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.60 E-value=2.3 Score=37.11 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=62.0
Q ss_pred HHHHHHHHHCCCChhhHHHHhhccceeeeeeccCCCCCCCCccccccccCCC-----------ceeEEEecCC--CCCcc
Q 018221 182 KILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDAS-----------ALTVLLQINE--MDGLQ 248 (359)
Q Consensus 182 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~--~~GLq 248 (359)
+|.+.|+..+|++.+ ....+++.+|.+... ..+|.|+. .+|+|+.-++ .||=-
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 344444445677531 233578888876322 45677753 3788877443 34433
Q ss_pred eecCCeEEEecCCCCeEEEEecccchhccCCc-ccCccccccCCCCCccceeEeeec
Q 018221 249 IKKDGKWVAVKPLPDAFVVNIGDVLEILTNGT-YPSIEHRATVNSVKERLSLATFYS 304 (359)
Q Consensus 249 V~~~g~W~~V~p~pg~~vVniGD~l~~~SnG~-~kS~~HRVv~~~~~~R~Si~~F~~ 304 (359)
+..+. =+.|+|..|.+|+.-.- ..||. -..++|+|..-....|+++..+++
T Consensus 160 ~Fp~~-~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 160 FFPKL-NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EETTT-TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred EecCC-CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 33322 27899999999887531 12232 246799987544568999888765
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=80.99 E-value=3.3 Score=35.70 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=51.1
Q ss_pred eeeeeeccCCCCCCCCccccccccCCC--------ceeEEEecCCCCCcceec----------CCeEEEecCCCCeEEEE
Q 018221 207 QAFRMNYYPPCLQPEKVVGHNSHCDAS--------ALTVLLQINEMDGLQIKK----------DGKWVAVKPLPDAFVVN 268 (359)
Q Consensus 207 ~~lrl~~YPp~~~~~~~~g~~~HtD~~--------~lTlL~q~~~~~GLqV~~----------~g~W~~V~p~pg~~vVn 268 (359)
..+-+|+|.+-. -++++|.|-. ++++-+. ...=+.+.. ++..+.+.-.+|.++|.
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 346689998822 3788999862 1233222 112233332 12578899999999999
Q ss_pred ecccchhccCCcccCccccccCCC--CCccceeEee
Q 018221 269 IGDVLEILTNGTYPSIEHRATVNS--VKERLSLATF 302 (359)
Q Consensus 269 iGD~l~~~SnG~~kS~~HRVv~~~--~~~R~Si~~F 302 (359)
-|+.=..|. |.|-... ...|+|+.|=
T Consensus 173 ~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 999877776 5553322 3579998873
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=80.55 E-value=3.5 Score=36.45 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=52.8
Q ss_pred eeeeeeccCCCCCCCCccccccccCCC--------ceeEEEecCCCCCcceec-C----------CeEEEecCCCCeEEE
Q 018221 207 QAFRMNYYPPCLQPEKVVGHNSHCDAS--------ALTVLLQINEMDGLQIKK-D----------GKWVAVKPLPDAFVV 267 (359)
Q Consensus 207 ~~lrl~~YPp~~~~~~~~g~~~HtD~~--------~lTlL~q~~~~~GLqV~~-~----------g~W~~V~p~pg~~vV 267 (359)
..+-+|+|++- .-++++|.|-. +.|+-+. ...=+.+.. . +..+.+.-.+|.++|
T Consensus 126 n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 45678999872 23788999952 2333332 111233322 1 468999999999999
Q ss_pred EecccchhccCCcccCccccccCCCCCccceeEeee
Q 018221 268 NIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFY 303 (359)
Q Consensus 268 niGD~l~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~ 303 (359)
.-|+.=..|.-|.-+.. .....|+|+.|=.
T Consensus 199 M~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp EEETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred EChhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 99998777764433211 1246799998755
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=72.11 E-value=6.7 Score=34.01 Aligned_cols=80 Identities=19% Similarity=0.119 Sum_probs=50.4
Q ss_pred eeeeeeccCCCCCCCCccccccccCC-----C--ceeEEEecCCCCCcceec---CCeEEEecCCCCeEEEEecccchhc
Q 018221 207 QAFRMNYYPPCLQPEKVVGHNSHCDA-----S--ALTVLLQINEMDGLQIKK---DGKWVAVKPLPDAFVVNIGDVLEIL 276 (359)
Q Consensus 207 ~~lrl~~YPp~~~~~~~~g~~~HtD~-----~--~lTlL~q~~~~~GLqV~~---~g~W~~V~p~pg~~vVniGD~l~~~ 276 (359)
..+-+|+|.+ .. ++++|.|- + ++|+-+. ...=+.+.. .+..+.+.-.+|+++|.-|+. +.|
T Consensus 105 n~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~ 175 (211)
T 3i3q_A 105 DACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLF 175 (211)
T ss_dssp CEEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTC
T ss_pred CEEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchH-Hce
Confidence 4467899987 23 78999993 2 2233332 122244432 367889999999999998887 323
Q ss_pred cCCcccCccccccCCC-------CCccceeEeee
Q 018221 277 TNGTYPSIEHRATVNS-------VKERLSLATFY 303 (359)
Q Consensus 277 SnG~~kS~~HRVv~~~-------~~~R~Si~~F~ 303 (359)
.|.|.... ...|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 36664332 23599988754
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=61.39 E-value=7.1 Score=36.53 Aligned_cols=94 Identities=19% Similarity=0.163 Sum_probs=59.2
Q ss_pred ceeeeeeccCCCCCCCCccccccccCCC------ceeEEEecCCCCCcceec-CCeEEEecCCCCeEEEEecccchhccC
Q 018221 206 MQAFRMNYYPPCLQPEKVVGHNSHCDAS------ALTVLLQINEMDGLQIKK-DGKWVAVKPLPDAFVVNIGDVLEILTN 278 (359)
Q Consensus 206 ~~~lrl~~YPp~~~~~~~~g~~~HtD~~------~lTlL~q~~~~~GLqV~~-~g~W~~V~p~pg~~vVniGD~l~~~Sn 278 (359)
...+-+|+|.+ . -++++|.|-. ++|+=+. ...=+.+.. +|.++.+.-.+|+++|.-|+.=..|.-
T Consensus 197 ~n~~lvN~Y~~-----G-~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEP-----G-QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECT-----T-CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecC-----C-CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 34567899977 1 2789999984 2233221 222244443 577999999999999999998888866
Q ss_pred CcccCccccccC------------------CCCCccceeEeeecCCC
Q 018221 279 GTYPSIEHRATV------------------NSVKERLSLATFYSPKL 307 (359)
Q Consensus 279 G~~kS~~HRVv~------------------~~~~~R~Si~~F~~P~~ 307 (359)
|.-+-...-+-. .....|+|+.|=.-+..
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 554433222110 01235999988765554
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=48.87 E-value=9.3 Score=32.87 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=29.3
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCC
Q 018221 52 QLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGV 89 (359)
Q Consensus 52 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv 89 (359)
.||++++... ++.+..+.+.+++++.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~--g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP--GSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT--TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC--CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998754 34567788999998888889999996
No 17
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=46.07 E-value=7.1 Score=37.82 Aligned_cols=53 Identities=13% Similarity=0.218 Sum_probs=39.2
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFN 106 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~ 106 (359)
.-||.||++++.++. ..++..+..++.|++.|.|. ||.+...+..+...+|.+
T Consensus 99 ~~iP~i~f~di~~~~--~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKAGH--VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHHTC--CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCCC--CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 569999999774332 12455577889999988876 898888777777777753
No 18
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=42.74 E-value=50 Score=30.34 Aligned_cols=46 Identities=15% Similarity=0.170 Sum_probs=34.4
Q ss_pred CCCCCHHHH-HHHHHHHhhcCeEEEEeCCCC----HHHHHHHHHHHhhhhC
Q 018221 61 LLSGDDSEL-EKLDNTCKEWGFFQLINHGVS----SSLVEKVKAEIQDFFN 106 (359)
Q Consensus 61 l~~~~~~~~-~~l~~A~~~~GfF~v~nhGv~----~~l~~~~~~~~~~fF~ 106 (359)
|..++.+++ +++.+.++.-||..=.+|||+ .+-+..+.+++++|++
T Consensus 298 l~~g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 445665544 667777777787666689874 5889999999999985
No 19
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=41.72 E-value=47 Score=28.24 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=44.4
Q ss_pred cccccccCCC--ceeEEEecCCCCCcceecCCeEEEecCCCCeEEEEecccchhccCCcc----cCccccccCCCCCccc
Q 018221 224 VGHNSHCDAS--ALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTY----PSIEHRATVNSVKERL 297 (359)
Q Consensus 224 ~g~~~HtD~~--~lTlL~q~~~~~GLqV~~~g~W~~V~p~pg~~vVniGD~l~~~SnG~~----kS~~HRVv~~~~~~R~ 297 (359)
-.+.+|+|+. .+++.+. |+| ++ ++ ..+.||+.-..|..|+. -|-.|.|..+++.+|+
T Consensus 113 ~~I~pH~g~~n~~lR~HL~------L~~---------p~-~~-~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rv 175 (197)
T 3rcq_A 113 THVWPHTGPTNCRLRMHLG------LVI---------PK-EG-CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRL 175 (197)
T ss_dssp EEEEEECCSCTTEEEEEEE------EEC---------CS-SS-EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEE
T ss_pred CCcCCeeCCCCCeEEEEEE------EEe---------CC-CC-cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEE
Confidence 3578899985 4455443 332 22 22 33567888888888874 4678999988888897
Q ss_pred eeEe-eecCCCC
Q 018221 298 SLAT-FYSPKLD 308 (359)
Q Consensus 298 Si~~-F~~P~~d 308 (359)
-+.+ |.+|+.+
T Consensus 176 vL~~D~~rPdl~ 187 (197)
T 3rcq_A 176 IFIVDVWHPELT 187 (197)
T ss_dssp EEEEEEECTTSC
T ss_pred EEEEeeeCCCCC
Confidence 6554 5567653
No 20
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=41.45 E-value=16 Score=31.10 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=28.7
Q ss_pred CcceE-eCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCC
Q 018221 52 QLPVI-DMHRLLSGDDSELEKLDNTCKEWGFFQLINHGV 89 (359)
Q Consensus 52 ~iPvI-Dls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv 89 (359)
.||++ ++... ++.+..+.+.+++++.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~--g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS--SSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC--CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 77653 34467788999998888899999995
No 21
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=41.43 E-value=14 Score=31.74 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=28.8
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCC
Q 018221 52 QLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGV 89 (359)
Q Consensus 52 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv 89 (359)
.||++++... +..+..+.+.+++++.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~--g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF--GTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT--TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC--CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998754 34466788999998888888999996
No 22
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=41.25 E-value=25 Score=31.22 Aligned_cols=51 Identities=22% Similarity=0.292 Sum_probs=38.4
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFN 106 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~ 106 (359)
.+|+-|||+... +.+.+++|.+++.++|+..+.+-.++.+ ...+.++.|-.
T Consensus 16 aei~gvdl~~~l--~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~ 66 (283)
T 1otj_A 16 AQISGADLTRPL--SDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGE 66 (283)
T ss_dssp EEEESCCSSSCC--CHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSC
T ss_pred EEEECCCcCccC--CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 568888998743 4567899999999999999999887754 44455565543
No 23
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=39.19 E-value=14 Score=34.91 Aligned_cols=52 Identities=25% Similarity=0.233 Sum_probs=39.9
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhCC
Q 018221 52 QLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNL 107 (359)
Q Consensus 52 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~l 107 (359)
++|.||++.+.+ +++.+.++.+|+.++|+..+.+-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~-~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR-YDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH-CHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhc-CHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999987643 3467899999999999999999888753 445566666544
No 24
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=39.00 E-value=70 Score=32.14 Aligned_cols=105 Identities=16% Similarity=0.192 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCCChhhHHHHhhccceeeeeeccCCCCCCCCccccccccCC-C--ceeEEEecCC---------CCCcce
Q 018221 182 KILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDA-S--ALTVLLQINE---------MDGLQI 249 (359)
Q Consensus 182 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~-~--~lTlL~q~~~---------~~GLqV 249 (359)
.++..|+...|++. +.+...-+.+++|++- --+..|.|. + .||+++.-+. .|.|++
T Consensus 105 ~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK------LSGSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHTCCC------CCSSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHhCCcc------cCCCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 34556666666521 1111223667788762 246788884 2 3666664222 334777
Q ss_pred ecC--------CeEEEecCCCCeEEEEecccchhccCCcccCccccccC-CCCCccceeEeee-cCCC
Q 018221 250 KKD--------GKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATV-NSVKERLSLATFY-SPKL 307 (359)
Q Consensus 250 ~~~--------g~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HRVv~-~~~~~R~Si~~F~-~P~~ 307 (359)
+.. .....|.|.-|.+|+..-.- + ...|.|.. ..++.|+||+-.+ .|..
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFFKVLP------G---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEEECCT------T---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEEEcCC------C---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 752 13678999999999875210 1 23565421 1278899998765 4433
No 25
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=38.91 E-value=18 Score=31.56 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=29.8
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGV 89 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv 89 (359)
..||++++... ++.+..+.+.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~--g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKP--GSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCST--TCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCC--CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 36999998753 45567788999998888889999996
No 26
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=34.69 E-value=30 Score=26.91 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=28.7
Q ss_pred eEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHH-HHHH
Q 018221 55 VIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSS-LVEK 96 (359)
Q Consensus 55 vIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~-l~~~ 96 (359)
|||++.+. +.....+|.+.|+++|+.-|=--|.+.+ +.+.
T Consensus 51 VlDl~~l~--~~~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~ 91 (120)
T 3ghf_A 51 VINVSGLE--SPVNWPELHKIVTSTGLRIIGVSGCKDASLKVE 91 (120)
T ss_dssp EEEEEECC--SSCCHHHHHHHHHTTTCEEEEEESCCCHHHHHH
T ss_pred EEEccccC--ChHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHH
Confidence 67998874 2235788999999999999866665544 4433
No 27
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=34.23 E-value=39 Score=30.37 Aligned_cols=52 Identities=6% Similarity=0.045 Sum_probs=39.4
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCC-CCHHHHHHHHHHHhhhhCC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHG-VSSSLVEKVKAEIQDFFNL 107 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhG-v~~~l~~~~~~~~~~fF~l 107 (359)
.+|+-|||+... +.+.+++|.+++.++|+..+.+-. ++. +...+.++.|-.+
T Consensus 26 aei~gvdl~~~l--~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDL--DAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTC--CHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccC--CHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 567778998743 456789999999999999999887 875 4555666666543
No 28
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.93 E-value=14 Score=26.16 Aligned_cols=41 Identities=17% Similarity=0.140 Sum_probs=35.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHCCCChhhHHHHhhc
Q 018221 164 PFRDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFEN 204 (359)
Q Consensus 164 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~ 204 (359)
+-+..++.|+..-.+-...-+..||+.+||+.+.....|..
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFqN 55 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQ 55 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 55778899998888888888999999999999988877764
No 29
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=33.89 E-value=39 Score=30.11 Aligned_cols=52 Identities=13% Similarity=0.210 Sum_probs=39.6
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHhhhhCC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNL 107 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv~~~l~~~~~~~~~~fF~l 107 (359)
++|.=|||+... +++..++|.+|+.++|...+.+-.++.+ +..+.++.|=.+
T Consensus 14 aei~gvdl~~~l--~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~l 65 (277)
T 3pvj_A 14 AQISGVDISRDI--SAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGDL 65 (277)
T ss_dssp EEEESCCTTSCC--CHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSCE
T ss_pred EEEeCCCccccC--CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 567789998743 4577899999999999999999888764 445566766543
No 30
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=33.31 E-value=20 Score=32.21 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=29.2
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCC
Q 018221 52 QLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGV 89 (359)
Q Consensus 52 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv 89 (359)
.||++++... ++.+..+.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~--g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP--GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS--SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC--CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 5999988643 44567788999999988899999996
No 31
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=31.92 E-value=33 Score=31.16 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=38.9
Q ss_pred ccccccCC--------CceeEEEecCCCCCcceecCCeEEEecCCCCeEEEEecccchhccCCcccCccccccCCCCCcc
Q 018221 225 GHNSHCDA--------SALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKER 296 (359)
Q Consensus 225 g~~~HtD~--------~~lTlL~q~~~~~GLqV~~~g~W~~V~p~pg~~vVniGD~l~~~SnG~~kS~~HRVv~~~~~~R 296 (359)
.+.+|.|+ +.+.+...-...+|.....+|+-+..++ |...+ -| -+..|+|.++++.+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~---------~d---~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWF---------LD---AATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEE---------CC---TTSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEE---------Ec---CCCeeEEEcCCCCCe
Confidence 57899998 3344444433455555555554443332 33211 11 245799999998999
Q ss_pred ceeEeee
Q 018221 297 LSLATFY 303 (359)
Q Consensus 297 ~Si~~F~ 303 (359)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988755
No 32
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=30.80 E-value=28 Score=31.20 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=29.9
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeCCC
Q 018221 52 QLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGV 89 (359)
Q Consensus 52 ~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nhGv 89 (359)
.||++|+..+ ..+.++.+.|.+++.+.-.+.+.|||+
T Consensus 156 ~v~~~~y~~~-~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGI-ALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCS-SCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCC-CCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 5999998764 224567788999999999999999995
No 33
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=26.91 E-value=47 Score=21.51 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHCCCChh
Q 018221 175 EIKNLTLKILDQMAKALRMDPN 196 (359)
Q Consensus 175 ~~~~la~~ll~~l~~~Lgl~~~ 196 (359)
.-.+|+..|.+++++.||.+++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~ 39 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQ 39 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcc
Confidence 4578899999999999999875
No 34
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=26.88 E-value=64 Score=29.17 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=39.2
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHHhhhhCC
Q 018221 51 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINH-GVSSSLVEKVKAEIQDFFNL 107 (359)
Q Consensus 51 ~~iPvIDls~l~~~~~~~~~~l~~A~~~~GfF~v~nh-Gv~~~l~~~~~~~~~~fF~l 107 (359)
.+|+=|||+... +++.+++|..|+.++|...+.|- .++.+ +..+.++.|=.+
T Consensus 20 aei~gvdl~~~L--~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDL--DDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTC--CHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccC--CHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 568888998432 45678999999999999999998 78764 445566666544
No 35
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=26.36 E-value=63 Score=18.68 Aligned_cols=17 Identities=41% Similarity=0.618 Sum_probs=15.1
Q ss_pred HHHHHHHHHHhhcCeEE
Q 018221 67 SELEKLDNTCKEWGFFQ 83 (359)
Q Consensus 67 ~~~~~l~~A~~~~GfF~ 83 (359)
+.++.|.-.|.+-|||+
T Consensus 10 ~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHhccCcccc
Confidence 56788999999999998
No 36
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=26.15 E-value=61 Score=21.21 Aligned_cols=23 Identities=9% Similarity=0.192 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHCCCChhh
Q 018221 175 EIKNLTLKILDQMAKALRMDPND 197 (359)
Q Consensus 175 ~~~~la~~ll~~l~~~Lgl~~~~ 197 (359)
.-++|+..|.+++++.||.++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 34678899999999999998753
No 37
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=24.27 E-value=35 Score=19.05 Aligned_cols=13 Identities=31% Similarity=0.710 Sum_probs=10.1
Q ss_pred cceecCCeEEEec
Q 018221 247 LQIKKDGKWVAVK 259 (359)
Q Consensus 247 LqV~~~g~W~~V~ 259 (359)
..|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4678899999754
No 38
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=23.84 E-value=32 Score=29.22 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=25.8
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHhhcC---eEEEEeCCC
Q 018221 52 QLPVIDMHRLLSGDDSELEKLDNTCKEWG---FFQLINHGV 89 (359)
Q Consensus 52 ~iPvIDls~l~~~~~~~~~~l~~A~~~~G---fF~v~nhGv 89 (359)
.||+++.. .+..+..+.+.+++.+.+ .+.+.|||+
T Consensus 139 ~vp~~~~~---~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE---QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC---SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC---CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 68998874 233356678888888765 788899995
No 39
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=23.81 E-value=53 Score=29.29 Aligned_cols=38 Identities=18% Similarity=0.385 Sum_probs=28.5
Q ss_pred CcceEeCCC-------CCCCCHHHHHHHHHHHhhcCeEEEEeCCC
Q 018221 52 QLPVIDMHR-------LLSGDDSELEKLDNTCKEWGFFQLINHGV 89 (359)
Q Consensus 52 ~iPvIDls~-------l~~~~~~~~~~l~~A~~~~GfF~v~nhGv 89 (359)
.||++++.. ..-++.+..+.|.+++.+.-.+.+.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 599999641 12234567788999999888888899995
No 40
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.85 E-value=63 Score=20.90 Aligned_cols=22 Identities=14% Similarity=0.240 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHCCCChh
Q 018221 175 EIKNLTLKILDQMAKALRMDPN 196 (359)
Q Consensus 175 ~~~~la~~ll~~l~~~Lgl~~~ 196 (359)
.-++|+..|.+++++.||++++
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~ 36 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEE 36 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcC
Confidence 4568899999999999999864
No 41
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=21.93 E-value=78 Score=20.45 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHCCCChh
Q 018221 175 EIKNLTLKILDQMAKALRMDPN 196 (359)
Q Consensus 175 ~~~~la~~ll~~l~~~Lgl~~~ 196 (359)
.-++|+..|.+++.+.||++++
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~ 36 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLE 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcc
Confidence 4578899999999999999875
No 42
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=20.83 E-value=17 Score=26.88 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=14.5
Q ss_pred chhccCCcccCcccccc
Q 018221 273 LEILTNGTYPSIEHRAT 289 (359)
Q Consensus 273 l~~~SnG~~kS~~HRVv 289 (359)
|..-|||+|||++.-|+
T Consensus 49 lrktsngrykstlklvv 65 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVV 65 (131)
T ss_dssp EEECTTSEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEE
Confidence 56679999999998876
No 43
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=20.83 E-value=72 Score=19.88 Aligned_cols=41 Identities=17% Similarity=0.391 Sum_probs=32.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHCCCChhhHHHHhhc
Q 018221 164 PFRDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFEN 204 (359)
Q Consensus 164 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~ 204 (359)
+....+.+|.+.-.++...-|.-.+..|||....+..+|++
T Consensus 7 everklkefvrrhqeitqetlheyaqklglnqqaieqffre 47 (52)
T 1y66_A 7 EVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQFFRE 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHH
Confidence 44556788888889999999999999999987777766653
Done!