Query 018226
Match_columns 359
No_of_seqs 181 out of 1827
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 11:54:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 1.3E-60 4.3E-65 457.1 24.6 315 30-358 1-327 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 1.4E-58 5E-63 444.0 25.7 322 28-358 6-340 (383)
3 1qdm_A Prophytepsin; aspartic 100.0 1.1E-56 3.9E-61 442.0 21.5 313 31-349 1-313 (478)
4 3cms_A Chymosin B; hydrolase, 100.0 2.4E-53 8.4E-58 399.9 26.4 272 77-358 3-284 (323)
5 4aa9_A Chymosin; hydrolase, as 100.0 1.2E-53 4E-58 401.6 23.4 270 79-358 2-281 (320)
6 1tzs_A Cathepsin E; hydrolase, 100.0 6.1E-53 2.1E-57 401.6 24.9 280 76-358 11-299 (351)
7 1dpj_A Proteinase A; proteinas 100.0 1.3E-52 4.5E-57 395.9 25.3 273 78-358 3-286 (329)
8 3k1w_A Renin; protease, altern 100.0 1.4E-52 4.7E-57 397.7 25.5 280 76-359 6-298 (341)
9 1b5f_A Protein (cardosin A); h 100.0 2.4E-52 8.3E-57 376.6 24.1 237 78-318 3-239 (239)
10 1miq_A Plasmepsin; aspartic pr 100.0 9.4E-53 3.2E-57 403.3 22.7 272 76-358 50-334 (375)
11 3qvc_A Histo-aspartic protease 100.0 9.1E-53 3.1E-57 410.9 23.0 271 76-358 125-409 (451)
12 2bju_A Plasmepsin II; aspartic 100.0 2.1E-52 7.2E-57 407.9 23.8 273 76-358 126-410 (453)
13 1am5_A Pepsin, acid proteinase 100.0 2.3E-52 8E-57 393.4 22.7 270 79-358 3-281 (324)
14 1htr_B Gastricsin; aspartyl pr 100.0 2E-52 6.9E-57 394.6 21.8 272 79-358 4-285 (329)
15 1mpp_A Pepsin; hydrolase(acid 100.0 1E-50 3.5E-55 387.8 24.6 277 76-358 6-317 (361)
16 1yg9_A Aspartic protease BLA G 100.0 1.2E-50 4E-55 382.7 23.6 269 77-358 6-290 (330)
17 2apr_A Rhizopuspepsin; hydrola 100.0 5.4E-49 1.8E-53 370.6 26.9 264 84-358 11-286 (325)
18 3fv3_A SAPP1P-secreted asparti 100.0 1.4E-48 4.8E-53 369.9 26.6 264 78-358 3-293 (339)
19 3c9x_A Trichoderma reesei aspa 100.0 1.3E-48 4.5E-53 368.6 24.2 265 84-358 11-291 (329)
20 2qzx_A Candidapepsin-5; aspart 100.0 5.2E-48 1.8E-52 366.4 27.2 268 78-358 3-295 (342)
21 1oew_A Endothiapepsin; hydrola 100.0 2.2E-48 7.5E-53 367.0 23.2 262 86-358 13-290 (329)
22 1j71_A Candidapepsin, aspartic 100.0 8.9E-48 3.1E-52 363.6 27.3 256 78-346 3-279 (334)
23 3pvk_A Candidapepsin-2; hydrol 100.0 5E-48 1.7E-52 366.5 25.2 269 78-358 3-295 (342)
24 1izd_A Aspartic proteinase; su 100.0 9.8E-47 3.4E-51 354.8 23.8 261 80-358 9-284 (323)
25 1ibq_A Aspergillopepsin; aspar 100.0 2.5E-46 8.6E-51 352.3 23.9 260 86-358 12-286 (325)
26 1bxo_A Protein (penicillopepsi 100.0 8.9E-47 3.1E-51 355.1 18.2 261 80-358 9-284 (323)
27 3lpj_A Beta-secretase 1; alzhe 100.0 8.3E-47 2.8E-51 371.1 17.1 243 80-328 66-334 (455)
28 1wkr_A Polyporopepsin; hydrola 100.0 3.5E-45 1.2E-49 346.7 26.0 245 78-344 3-272 (340)
29 2ewy_A Beta-secretase 2; BACE2 100.0 1.3E-45 4.6E-50 355.0 20.1 242 80-327 5-269 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 3E-45 1E-49 354.7 19.8 242 81-328 21-288 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 2.4E-44 8.1E-49 347.7 19.8 243 80-328 13-281 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 2.6E-42 9E-47 334.1 19.2 267 77-358 9-346 (403)
33 3vla_A EDGP; extracellular, in 100.0 2.8E-41 9.6E-46 327.2 15.3 232 76-317 7-293 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 5.4E-38 1.8E-42 301.7 11.2 221 79-317 4-257 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 9.8E-31 3.3E-35 235.7 17.3 188 169-358 1-198 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2.7E-25 9.1E-30 170.9 10.8 93 78-170 3-96 (97)
37 2i1a_A DNA damage-inducible pr 94.0 0.067 2.3E-06 43.1 5.1 91 86-201 23-115 (148)
38 3vcm_P Prorenin; aspartic prot 91.4 0.17 5.8E-06 31.6 3.1 25 29-53 7-31 (43)
39 2hs1_A HIV-1 protease; ultra-h 84.7 1.3 4.4E-05 33.0 4.6 30 90-121 9-38 (99)
40 1fmb_A EIAV protease; hydrolas 84.2 1.1 3.8E-05 33.7 4.1 26 90-117 9-34 (104)
41 1tzs_P Activation peptide from 81.4 0.6 2.1E-05 27.0 1.4 23 29-51 2-24 (35)
42 1htr_P Progastricsin (Pro segm 81.3 0.69 2.4E-05 28.2 1.8 24 30-53 2-25 (43)
43 3ec0_A Protease; HIV-2, inhibi 80.7 2.2 7.5E-05 31.7 4.5 30 90-121 9-38 (99)
44 3s8i_A Protein DDI1 homolog 1; 76.0 2.3 8E-05 34.1 3.8 90 88-201 23-114 (148)
45 3liy_A Protease; hydrolase, hy 75.5 2.6 8.9E-05 32.1 3.6 33 90-122 11-46 (116)
46 2hah_A Protease, retropepsin; 72.9 3.6 0.00012 31.5 3.9 27 90-119 15-41 (116)
47 1b5f_B Protein (cardosin A); h 69.1 1.1 3.8E-05 32.2 0.3 39 319-358 1-45 (87)
48 3sqf_A Protease; folded monome 66.6 6.6 0.00022 29.9 4.1 30 90-121 10-39 (114)
49 3slz_A GAG-Pro-POL polyprotein 65.2 8.4 0.00029 30.1 4.7 30 89-120 22-51 (132)
50 2i1a_A DNA damage-inducible pr 65.1 6.5 0.00022 31.0 4.2 29 276-311 31-59 (148)
51 3s8i_A Protein DDI1 homolog 1; 64.9 5.5 0.00019 31.8 3.7 29 276-311 29-57 (148)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 55.9 11 0.00036 31.9 4.0 28 90-119 9-36 (203)
53 2rsp_A RSV protease; hydrolase 53.7 14 0.00049 28.5 4.1 24 96-121 27-50 (124)
54 1bxo_A Protein (penicillopepsi 51.8 19 0.00064 32.4 5.4 44 255-308 3-46 (323)
55 1ibq_A Aspergillopepsin; aspar 50.2 20 0.00068 32.2 5.3 43 256-308 3-45 (325)
56 1izd_A Aspartic proteinase; su 48.9 22 0.00075 31.9 5.3 44 256-309 4-47 (323)
57 1oew_A Endothiapepsin; hydrola 37.3 47 0.0016 29.7 5.6 45 256-308 3-48 (329)
58 3c9x_A Trichoderma reesei aspa 34.6 55 0.0019 29.3 5.6 46 256-309 3-49 (329)
59 1b5f_A Protein (cardosin A); h 33.0 59 0.002 27.6 5.3 39 79-119 181-227 (239)
60 1mpp_A Pepsin; hydrolase(acid 32.7 38 0.0013 30.8 4.2 45 255-307 4-50 (361)
61 3ka2_A [L-Ala51;Gly51']HIV-1 p 30.5 47 0.0016 27.9 4.0 29 90-120 113-141 (203)
62 3aup_A SBG7S, BG, basic 7S glo 29.7 56 0.0019 30.2 4.9 41 77-119 217-276 (403)
63 1lya_B Cathepsin D; lysosomal 29.4 83 0.0029 26.5 5.7 40 79-120 92-138 (241)
64 2apr_A Rhizopuspepsin; hydrola 27.4 62 0.0021 28.9 4.6 43 258-308 6-48 (325)
65 3cms_A Chymosin B; hydrolase, 26.0 25 0.00086 31.5 1.7 43 257-307 2-46 (323)
66 1miq_A Plasmepsin; aspartic pr 23.0 1E+02 0.0035 28.2 5.3 40 79-120 232-274 (375)
67 3qvc_A Histo-aspartic protease 22.7 81 0.0028 29.8 4.6 43 79-121 307-350 (451)
68 2x0b_A Renin; hydrolase-hormon 22.2 1.2E+02 0.0042 27.8 5.7 40 79-120 235-281 (383)
69 1wkr_A Polyporopepsin; hydrola 20.2 1.4E+02 0.0049 26.5 5.7 42 78-120 175-224 (340)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.3e-60 Score=457.14 Aligned_cols=315 Identities=37% Similarity=0.654 Sum_probs=271.5
Q ss_pred eEEEceeeccchhhhhhhhcccccccchhhhccccccccCCCCCC--CCceeEeeeecCCceEEEEEEecCCCceEEEEe
Q 018226 30 LYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGES--GDADIVALKNYMDAQYFGEIGIGTPPQNFTVIF 107 (359)
Q Consensus 30 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~ 107 (359)
++||||+|.++.|+.+.+.+..+++ ++ .|+++++.+.... .....+||.|+.|.+|+++|+||||||+|.|++
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDF---LK--THKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHH---HH--HCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHH---Hh--hhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 4699999999999999998876654 32 2344433222111 135678999999999999999999999999999
Q ss_pred eCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCceeeeEEEEEEEeceeEecCcEEEEEEeecCc
Q 018226 108 DTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSL 187 (359)
Q Consensus 108 DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~ 187 (359)
||||+++||+|..|. +..|..++.|++++|+||+..++.|.+.|++|++.|.++.|+|++++..++++.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 6789999999999999999999999999999999999999999999999999999999887665
Q ss_pred cccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCC
Q 018226 188 TFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKG 267 (359)
Q Consensus 188 ~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~ 267 (359)
.+....++||||||++..+....+|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|+|+++|+|+.+.+
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6677788999999999988877889999999999999999999999862 34899999999999999999999999999
Q ss_pred ceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCC----ceEEecCCc------ccccccceee
Q 018226 268 YWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT----GIVSQECKA------VVSQYGEEII 337 (359)
Q Consensus 268 ~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----~~~~~~C~~------~~~~fg~~~~ 337 (359)
+|.|.+++|.||++.+. +..++.|||||||+++++|++++++|.+++++. +.|.+||+. +.+.||+..+
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~~lP~i~f~~~g~~~ 311 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQY 311 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEE
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcccCCcEEEEECCEEE
Confidence 99999999999998875 667899999999999999999999999999985 779999996 3568888777
Q ss_pred ehhhccccchhhcccccceee
Q 018226 338 NMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~ 358 (359)
.++++++... ..+.|+
T Consensus 312 ~l~~~~yi~~-----~~~~C~ 327 (370)
T 3psg_A 312 PLSPSAYILQ-----DDDSCT 327 (370)
T ss_dssp EECHHHHEEE-----CSSCEE
T ss_pred EECHHHhccc-----CCCEEE
Confidence 7766544332 456676
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.4e-58 Score=444.02 Aligned_cols=322 Identities=38% Similarity=0.692 Sum_probs=244.1
Q ss_pred CceEEEceeeccchhhhhhhhcc-cccccchhhhccccccccCCCCCCCCceeEeeeecCCceEEEEEEecCCCceEEEE
Q 018226 28 GGLYRIGLKKRKFDLNNRVAARL-DSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVI 106 (359)
Q Consensus 28 ~~~~~ipl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~ 106 (359)
++++||||+|+++.|+.+.+.+. ..+. ++.....+.. .........+||.|+.+.+|+++|+||||||+|.|+
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi 79 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMARL---GPEWSQPMKR---LTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVV 79 (383)
T ss_dssp ---------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHHH---HHhhcccccc---ccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEE
Confidence 34789999999999998888775 3332 1111000010 001123456999999999999999999999999999
Q ss_pred eeCCCCCeeeeCCCCCC-CcccCCCccccCCCCCCceeCCceEEEEcCCCceeeeEEEEEEEeceeEecCcEEEEEEeec
Q 018226 107 FDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREP 185 (359)
Q Consensus 107 ~DTGSs~~wv~~~~C~~-~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~ 185 (359)
|||||+++||+|..|.. +.+|..++.|++++|+||+..++.|.+.|++|+++|.++.|+|++++..++ +.||++....
T Consensus 80 ~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~ 158 (383)
T 2x0b_A 80 FDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMP 158 (383)
T ss_dssp EETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred EeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecC
Confidence 99999999999999962 358999999999999999999999999999999999999999999999999 9999998876
Q ss_pred CccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCCCC--CCcEEEECcCCCCCeeeceEEEec
Q 018226 186 SLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE--EGGEIVFGGMDPDHYKGEHTYVPV 263 (359)
Q Consensus 186 ~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~--~~g~l~~Gg~d~~~~~g~l~~~p~ 263 (359)
+..|....++||||||++..+....+|++++|++||+|++++||+||++..+.. .+|+|+|||+|+++|+|+++|+|+
T Consensus 159 g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv 238 (383)
T 2x0b_A 159 ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINL 238 (383)
T ss_dssp HHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEB
T ss_pred CcccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEc
Confidence 555666788999999999988777889999999999999999999999864321 489999999999999999999999
Q ss_pred CCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCC---ceEEecCCc------ccccccc
Q 018226 264 TQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT---GIVSQECKA------VVSQYGE 334 (359)
Q Consensus 264 ~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~---~~~~~~C~~------~~~~fg~ 334 (359)
.+.++|.|.+++|.||++.+ .+..++.||+||||+++++|++++++|.+++++. +.|.++|+. +.+.||+
T Consensus 239 ~~~~~w~v~l~~i~v~~~~~-~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~~~~P~i~f~~~g 317 (383)
T 2x0b_A 239 IKTGVWQIQMKGVSVGSSTL-LCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGG 317 (383)
T ss_dssp SSTTSCEEEECEEEESSCCC-BSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGTTTCCCEEEEETT
T ss_pred CCCceEEEEEeEEEeCCceE-EcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEeccccccCceEEEEECC
Confidence 99999999999999999875 3677899999999999999999999999999984 779999985 4567888
Q ss_pred eeeehhhccccchhhcccccceee
Q 018226 335 EIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
..+.++++++..+.. .....+|+
T Consensus 318 ~~~~l~~~~yi~~~~-~~~~~~C~ 340 (383)
T 2x0b_A 318 KEYTLTSADYVFQES-YSSKKLCT 340 (383)
T ss_dssp EEEEECHHHHBCCCC-CCTTSEEE
T ss_pred EEEEECHHHhEeecc-CCCCCeEE
Confidence 777666544432211 11245887
No 3
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.1e-56 Score=442.03 Aligned_cols=313 Identities=72% Similarity=1.248 Sum_probs=268.7
Q ss_pred EEEceeeccchhhhhhhhcccccccchhhhccccccccCCCCCCCCceeEeeeecCCceEEEEEEecCCCceEEEEeeCC
Q 018226 31 YRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTG 110 (359)
Q Consensus 31 ~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTG 110 (359)
+||||+|++..++.+.+.+........ ..+++. ..+.+++...+||.|+.+.+|+++|+||||||+|.|+||||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTG 74 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQP---LLSGAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTG 74 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETT
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHH---HHhhcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCC
Confidence 489999999999999887654222110 111121 01122235669999999999999999999999999999999
Q ss_pred CCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCceeeeEEEEEEEeceeEecCcEEEEEEeecCcccc
Q 018226 111 SSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFL 190 (359)
Q Consensus 111 Ss~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~ 190 (359)
|+++||+|..|..+..|..++.|+|++|+||+..++.+.+.|++|++.|.++.|+|++++..++++.||++....+..|.
T Consensus 75 Ss~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~ 154 (478)
T 1qdm_A 75 SSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFL 154 (478)
T ss_dssp CCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHH
T ss_pred CcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccc
Confidence 99999999999655689999999999999999999999999999999999999999999999999999999877655555
Q ss_pred ccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceE
Q 018226 191 LAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQ 270 (359)
Q Consensus 191 ~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~ 270 (359)
...++||||||++..+.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|+++|+|+.+.++|.
T Consensus 155 ~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~ 234 (478)
T 1qdm_A 155 VAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQ 234 (478)
T ss_dssp HCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEE
T ss_pred cccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEE
Confidence 66789999999999887777889999999999999999999988643345899999999999999999999999899999
Q ss_pred EEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCCceEEecCCcccccccceeeehhhccccchhh
Q 018226 271 FDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKVSAKLS 349 (359)
Q Consensus 271 v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~ 349 (359)
|.+++|.||++.+.++..++.+||||||+++++|++++++|.+++++.+.+..+|+....+||..++++++++++|++.
T Consensus 235 v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~v 313 (478)
T 1qdm_A 235 FDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKI 313 (478)
T ss_dssp EEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHH
T ss_pred EEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhh
Confidence 9999999999987666678999999999999999999999999999998889999999999999999999998887654
No 4
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.4e-53 Score=399.92 Aligned_cols=272 Identities=40% Similarity=0.748 Sum_probs=242.7
Q ss_pred ceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCc
Q 018226 77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA 156 (359)
Q Consensus 77 ~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs 156 (359)
...+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568998999999999999999999999999999
Q ss_pred eeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCC
Q 018226 157 ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNA 236 (359)
Q Consensus 157 ~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~ 236 (359)
+.|.++.|+|++++..++++.||++....+..+....++||||||++..+....++++++|++||.|.+++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999998875544555678999999999988777889999999999999999999998863
Q ss_pred CCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhC
Q 018226 237 DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIG 316 (359)
Q Consensus 237 ~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~ 316 (359)
. .|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|.|+++.+. +..++.+||||||+++++|++++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 49999999999999999999999999999999999999998874 4567899999999999999999999999998
Q ss_pred CC----ceEEecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 317 AT----GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 317 ~~----~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+. +.|.++|+. +.+.||+..++++++ .+......+|+
T Consensus 238 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~-----~y~~~~~~~C~ 284 (323)
T 3cms_A 238 ATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPS-----AYTSQDQGFCT 284 (323)
T ss_dssp CEEETTTEEEECTTCTTTSCCEEEEETTEEEEECHH-----HHEEEETTEEE
T ss_pred CeecCCCcEEEECCCCccCceEEEEECCEEEEECHH-----HhccCCCCEEE
Confidence 85 679999984 456788777665554 44333567886
No 5
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.2e-53 Score=401.61 Aligned_cols=270 Identities=41% Similarity=0.750 Sum_probs=238.5
Q ss_pred eEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCcee
Q 018226 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (359)
Q Consensus 79 ~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~ 158 (359)
.+||+|+.|.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|++++|+||+..++.+.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 37899999999999999999999999999999999999999996 66899899999999999999999999999999999
Q ss_pred eeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCCC
Q 018226 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (359)
Q Consensus 159 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 238 (359)
|.++.|+|++++..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999887654455567899999999998877788999999999999999999999985
Q ss_pred CCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCC
Q 018226 239 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (359)
Q Consensus 239 ~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 318 (359)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.....++|||||+++++|++++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 456789999999999999999999999999875
Q ss_pred ----ceEEecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 319 ----GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 319 ----~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+.|.+||+. +.+.||+..++++++ .+......+|+
T Consensus 237 ~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~-----~y~~~~~~~C~ 281 (320)
T 4aa9_A 237 ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPS-----AYTSKDQGFCT 281 (320)
T ss_dssp ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHH-----HHEEEETTEEE
T ss_pred ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHH-----HhccCCCCeEE
Confidence 789999996 355788877766554 44444667886
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.1e-53 Score=401.60 Aligned_cols=280 Identities=43% Similarity=0.771 Sum_probs=242.7
Q ss_pred CceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCC
Q 018226 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (359)
Q Consensus 76 ~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~g 155 (359)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34458999999999999999999999999999999999999999996 56899899999999999999999999999999
Q ss_pred ceeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCC
Q 018226 156 AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRN 235 (359)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~ 235 (359)
++.|.++.|+|++++..++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||++.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 99999999999999999999999999876655555667899999999988877778899999999999999999999987
Q ss_pred CCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHh
Q 018226 236 ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI 315 (359)
Q Consensus 236 ~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i 315 (359)
......|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|.||++.+. +..++.+||||||+++++|++++++|.+++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 4333479999999999999999999999999999999999999998863 567889999999999999999999999999
Q ss_pred CCC---ceEEecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 316 GAT---GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 316 ~~~---~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++. +.|.++|+. +.+.||+..++++++++.-... .....+|+
T Consensus 249 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~-~~~~~~C~ 299 (351)
T 1tzs_A 249 GAAPVDGEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDF-VDGMQFCS 299 (351)
T ss_dssp TCEECSSSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC------CCEE
T ss_pred CCcccCCeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeecc-CCCCCeEE
Confidence 876 578999996 3557888777777655543221 11245786
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.3e-52 Score=395.93 Aligned_cols=273 Identities=42% Similarity=0.797 Sum_probs=240.4
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCce
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~ 157 (359)
..+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 458999999999999999999999999999999999999999996 4579889999999999999999999999999999
Q ss_pred eeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCC
Q 018226 158 SGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNAD 237 (359)
Q Consensus 158 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~ 237 (359)
.|.++.|+|++++..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999987654345556789999999998877677889999999999999999999987532
Q ss_pred -CCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhC
Q 018226 238 -EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIG 316 (359)
Q Consensus 238 -~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~ 316 (359)
....|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|.||++.+. ..++.+||||||+++++|++++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 23479999999999999999999999999999999999999998774 457899999999999999999999999998
Q ss_pred CC----ceEEecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 317 AT----GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 317 ~~----~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+. +.|.+||+. +.+.|++..++++++++.. ...++|+
T Consensus 240 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~-----~~~~~C~ 286 (329)
T 1dpj_A 240 AKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTL-----EVSGSCI 286 (329)
T ss_dssp CEECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEE-----EETTEEE
T ss_pred CccCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEe-----cCCCEEE
Confidence 75 779999985 3557888777766655443 2236786
No 8
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.4e-52 Score=397.65 Aligned_cols=280 Identities=42% Similarity=0.818 Sum_probs=244.1
Q ss_pred CceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCC-CcccCCCccccCCCCCCceeCCceEEEEcCC
Q 018226 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGT 154 (359)
Q Consensus 76 ~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~-~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~ 154 (359)
+...+||.|+.|.+|+++|+||||||++.|++||||+++||+|..|.. ...|..++.|++++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 566799999999999999999999999999999999999999999963 3579889999999999999999999999999
Q ss_pred CceeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecC
Q 018226 155 GAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNR 234 (359)
Q Consensus 155 gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~ 234 (359)
|++.|.++.|+|++++..+ ++.||++.......+....++||||||++..+....+|++++|++||+|++++||+||++
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999988765445566789999999998887777899999999999999999999998
Q ss_pred CC--CCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHH
Q 018226 235 NA--DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVN 312 (359)
Q Consensus 235 ~~--~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~ 312 (359)
.. .....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.....++|||||+++++|++++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 74 123489999999999999999999999999999999999999998753 567789999999999999999999999
Q ss_pred HHhCCC----ceEEecCCc------ccccccceeeehhhccccchhhcccccceeeC
Q 018226 313 HAIGAT----GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLII 359 (359)
Q Consensus 313 ~~i~~~----~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (359)
+++++. | |.+||+. +.+.||+..+.+++.++..... .....+|++
T Consensus 244 ~~~~~~~~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~-~~~~~~C~~ 298 (341)
T 3k1w_A 244 EALGAKKRLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQES-YSSKKLCTL 298 (341)
T ss_dssp HHHTCEECSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSC-CCTTSEEEB
T ss_pred HHcCCeecCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEcc-CCCCCeEEe
Confidence 999885 6 9999995 3558888777766654433221 112678863
No 9
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.4e-52 Score=376.60 Aligned_cols=237 Identities=70% Similarity=1.185 Sum_probs=217.5
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCce
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~ 157 (359)
..+||.|+.+.+|+++|.||||||+|.|++||||+++||+|..|..+..|..++.|+|++|+||+..++.+.+.|++|++
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 82 (239)
T 1b5f_A 3 AVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSI 82 (239)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred ceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcE
Confidence 45899999999999999999999999999999999999999999656689989999999999999999999999999999
Q ss_pred eeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCC
Q 018226 158 SGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNAD 237 (359)
Q Consensus 158 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~ 237 (359)
.|.++.|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||+|.+++||+||++..+
T Consensus 83 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~ 158 (239)
T 1b5f_A 83 TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVD 158 (239)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCS
T ss_pred EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999998775544555678999999998765 678899999999999999999998643
Q ss_pred CCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCC
Q 018226 238 EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGA 317 (359)
Q Consensus 238 ~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~ 317 (359)
....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.++..++.+||||||+++++|++++++|.++++|
T Consensus 159 ~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 159 EEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 34589999999999999999999999988999999999999999876666788999999999999999999999999998
Q ss_pred C
Q 018226 318 T 318 (359)
Q Consensus 318 ~ 318 (359)
+
T Consensus 239 ~ 239 (239)
T 1b5f_A 239 N 239 (239)
T ss_dssp C
T ss_pred C
Confidence 4
No 10
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=9.4e-53 Score=403.25 Aligned_cols=272 Identities=30% Similarity=0.606 Sum_probs=239.0
Q ss_pred CceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCC
Q 018226 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (359)
Q Consensus 76 ~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~g 155 (359)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34558999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred ceeeeEEEEEEEeceeEecCcEEEEEEee---cCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEe
Q 018226 156 AISGFFSEDHVKIGDLVVKDQEFIEATRE---PSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWF 232 (359)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~~fg~~~~~---~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l 232 (359)
++.|.++.|+|++|+..+++ .||++... .. .|....++||||||++..+....+|++++|++||.|.+++||+||
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L 206 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYL 206 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEEC
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEe
Confidence 99999999999999999999 99999872 22 344567899999999998877788999999999999999999999
Q ss_pred cCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHH
Q 018226 233 NRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVN 312 (359)
Q Consensus 233 ~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~ 312 (359)
++.. ...|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.||++.+ .++.+||||||+++++|++++++|+
T Consensus 207 ~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l~ 279 (375)
T 1miq_A 207 PVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKFF 279 (375)
T ss_dssp CTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHHH
T ss_pred cCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHHH
Confidence 9863 248999999999999999999999999999999999 99999876 5679999999999999999999999
Q ss_pred HHhCCC-----ceEEecCCc-----ccccccceeeehhhccccchhhcccccceee
Q 018226 313 HAIGAT-----GIVSQECKA-----VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 313 ~~i~~~-----~~~~~~C~~-----~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+++++. +.|.++|+. +.+.||+..+.++++++.-.... ....+|+
T Consensus 280 ~~~~~~~~~~~g~~~~~C~~~~~P~i~f~f~g~~~~l~~~~yi~~~~~-~g~~~C~ 334 (375)
T 1miq_A 280 ANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILE-VDDTLCM 334 (375)
T ss_dssp HHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSEEESSS-SSCSEEE
T ss_pred HHhCCcccCCCCeEEEECCCCCCCcEEEEECCEEEEECHHHhEeeccC-CCCCeEE
Confidence 999983 779999996 45578887777766555432210 1245886
No 11
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=9.1e-53 Score=410.87 Aligned_cols=271 Identities=28% Similarity=0.519 Sum_probs=238.6
Q ss_pred CceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCC
Q 018226 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (359)
Q Consensus 76 ~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~g 155 (359)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.+.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 45668999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred ceeeeEEEEEEEeceeEecCcEEEEEEe----ecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEE
Q 018226 156 AISGFFSEDHVKIGDLVVKDQEFIEATR----EPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFW 231 (359)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~ 231 (359)
++.|.++.|+|++|+..++ +.||++.. ..+ +....++||||||++..+....+|++++|++||.|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999987 433 4455779999999999887777899999999999999999999
Q ss_pred ecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHH
Q 018226 232 FNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 311 (359)
Q Consensus 232 l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 311 (359)
|++.. ..+|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.||+. +...+.++|||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 348999999999999999999999999999999999 999998 34578999999999999999999999
Q ss_pred HHHhCCC-----ceEEecCC-----cccccccceeeehhhccccchhhcccccceee
Q 018226 312 NHAIGAT-----GIVSQECK-----AVVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 312 ~~~i~~~-----~~~~~~C~-----~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++++++. +.|.+||+ .+.+.||+..+.++++++...... ...++|+
T Consensus 354 ~~~i~a~~~~~~g~y~v~C~~~~~P~itf~fgg~~i~lp~~~yi~~~~~-~~~~~C~ 409 (451)
T 3qvc_A 354 VESASVFKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLEN-IFSALCM 409 (451)
T ss_dssp HTTTTCEECTTSSCEEEETTCTTCCCEEEEETTEEEEECHHHHEEECTT-TSTTEEE
T ss_pred HHHcCCeecCCCCeEEeeCCcCcCCcEEEEECCEEEEEcHHHheeeccc-CCCCeEE
Confidence 9999875 78999998 345688888777766554433211 1346786
No 12
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.1e-52 Score=407.90 Aligned_cols=273 Identities=28% Similarity=0.556 Sum_probs=239.2
Q ss_pred CceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCC
Q 018226 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (359)
Q Consensus 76 ~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~g 155 (359)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.+.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred ceeeeEEEEEEEeceeEecCcEEEEEEeec--CccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEec
Q 018226 156 AISGFFSEDHVKIGDLVVKDQEFIEATREP--SLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFN 233 (359)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~~fg~~~~~~--~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~ 233 (359)
++.|.++.|+|++|+.+++ +.||++.... +..+....++||||||++..+....+|++++|++||.|.+++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999875 444545678999999999988777889999999999999999999999
Q ss_pred CCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHH
Q 018226 234 RNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNH 313 (359)
Q Consensus 234 ~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~ 313 (359)
+.. ..+|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.||+ .+ + .++.+||||||+++++|++++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999998999999999 99999 33 3 67899999999999999999999999
Q ss_pred HhCCC----c-eEEecCCc-----ccccccceeeehhhccccchhhcccccceee
Q 018226 314 AIGAT----G-IVSQECKA-----VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 314 ~i~~~----~-~~~~~C~~-----~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++++. | .|.+||+. +.+.||+..+.++++++.-... .....+|+
T Consensus 357 ~i~~~~~~~g~~~~v~C~~~~~P~itf~fgg~~~~l~~~~yi~~~~-~~g~~~C~ 410 (453)
T 2bju_A 357 NLDVIKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIE-DVGPGLCM 410 (453)
T ss_dssp TSSCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHHEEECT-TTSTTEEE
T ss_pred HhCCcccCCCceEEEecCCCCCCcEEEEECCEEEEECHHHhEeecc-cCCCceEE
Confidence 99874 5 79999986 4557887777666544432211 01345886
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-52 Score=393.41 Aligned_cols=270 Identities=39% Similarity=0.719 Sum_probs=239.8
Q ss_pred eEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCcee
Q 018226 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (359)
Q Consensus 79 ~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~ 158 (359)
.+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.+.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 56798899999999999999999999999999999
Q ss_pred eeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCCC
Q 018226 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (359)
Q Consensus 159 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 238 (359)
|.++.|+|++++..++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||++..
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-- 159 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG-- 159 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCC--
Confidence 999999999999999999999999876555556678999999999888777788999999999999999999998863
Q ss_pred CCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCC
Q 018226 239 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (359)
Q Consensus 239 ~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 318 (359)
...|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|+|+++.+. +.+ +.+||||||+++++|++++++|.+++++.
T Consensus 160 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 160 ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred CCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999988999999999999998763 344 89999999999999999999999999874
Q ss_pred ---ceEEecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 319 ---GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 319 ---~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+.|.++|+. +.+.||+..++++++++.- ....+|+
T Consensus 238 ~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~-----~~~~~C~ 281 (324)
T 1am5_A 238 ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIE-----GDQAFCT 281 (324)
T ss_dssp ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEE-----ESSSCEE
T ss_pred ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcc-----cCCCeEE
Confidence 679999995 4557888777666544432 2266786
No 14
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2e-52 Score=394.65 Aligned_cols=272 Identities=40% Similarity=0.766 Sum_probs=239.5
Q ss_pred eEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCcee
Q 018226 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (359)
Q Consensus 79 ~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~ 158 (359)
.+||+ +.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.+.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 37888 88999999999999999999999999999999999996 45798899999999999999999999999999999
Q ss_pred eeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCCC
Q 018226 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (359)
Q Consensus 159 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 238 (359)
|.++.|+|++++..++++.||++....+..+....++||||||++..+.....|++++|++||.|.+++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~- 160 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG- 160 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC-
Confidence 9999999999999999999999987655445566789999999998887777889999999999999999999988642
Q ss_pred CCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCC
Q 018226 239 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (359)
Q Consensus 239 ~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 318 (359)
...|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|+|+++.+..+..++.+||||||+++++|++++++|.+++++.
T Consensus 161 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 161 SSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp SEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred CCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 23799999999999999999999999999999999999999987633456789999999999999999999999999875
Q ss_pred ----ceEEecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 319 ----GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 319 ----~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+.|.++|+. +.+.||+..++++++++. ....++|+
T Consensus 241 ~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~-----~~~~g~C~ 285 (329)
T 1htr_B 241 EDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYI-----LSNNGYCT 285 (329)
T ss_dssp ECTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHE-----EECSSCEE
T ss_pred ecCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhc-----ccCCCEEE
Confidence 679999995 355788777766554433 22225886
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1e-50 Score=387.75 Aligned_cols=277 Identities=27% Similarity=0.467 Sum_probs=238.9
Q ss_pred CceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCC
Q 018226 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (359)
Q Consensus 76 ~~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~g 155 (359)
....+||.|+.+..|+++|+||||+|++.|++||||+++||+|..|..+..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 45568999999999999999999999999999999999999999995235798899999999999999999999999999
Q ss_pred ceeeeEEEEEEEeceeEecCcEEEEEEeecC-----ccccccccccccCCCccccccCC------CCChhhhhhcCCCCC
Q 018226 156 AISGFFSEDHVKIGDLVVKDQEFIEATREPS-----LTFLLAKFDGILGLGFQEISVGK------AVPVWYNMVNQGLVN 224 (359)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~-----~~~~~~~~~GilGLg~~~~s~~~------~~~~~~~l~~~g~i~ 224 (359)
++.|.++.|+|++++..++++.||++....+ ..+....++||||||++..+... .++++++|++||.|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998765 34555678999999998876533 778999999999999
Q ss_pred CCeEEEEecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCC----ceEEEEceEEECCeEeeeecCCeeEE-EccCCC
Q 018226 225 EPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKG----YWQFDMGDVMIDGQTTGFCAGGCAAI-ADSGTS 299 (359)
Q Consensus 225 ~~~fs~~l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~----~w~v~~~~i~vg~~~~~~~~~~~~ai-iDTGt~ 299 (359)
+++||+||++. ...|+|+|||+|+++|.|+++|+|+.+.. +|.|.+++|.|+++.+. +...+.+| |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999885 23899999999999999999999997765 99999999999998864 34568899 999999
Q ss_pred CcccCHHHHHHHHHHhCCC-----ceEEecCCc-------ccccc--c-----ceeeehhhccccchhhcccccceee
Q 018226 300 LLAGPTTIITQVNHAIGAT-----GIVSQECKA-------VVSQY--G-----EEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 300 ~i~lP~~~~~~i~~~i~~~-----~~~~~~C~~-------~~~~f--g-----~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++++|++++++|++++++. +.|.++|+. +.+.| | +..+.++++++.-... ....+|+
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~--~~~~~C~ 317 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVD--KSGETCM 317 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECS--SSSCEEE
T ss_pred ceeCCHHHHHHHHHHhCCcccCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecC--CCCCeeE
Confidence 9999999999999999984 679999985 23467 6 6666666655443211 1245886
No 16
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.2e-50 Score=382.68 Aligned_cols=269 Identities=28% Similarity=0.434 Sum_probs=236.9
Q ss_pred ceeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCccc--CCCccccCCCCCCceeCCceEEEEcCC
Q 018226 77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIAC--YFHSKYRSGRSSTYKKNGKSADIHYGT 154 (359)
Q Consensus 77 ~~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C--~~~~~f~~~~Sst~~~~~~~~~~~y~~ 154 (359)
...+||.|+.+..|+++|+|| ||++.|++||||+++||++..|. +..| ..++.|+|++| ||+..++.+.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 445799999999999999999 89999999999999999999996 5689 88899999999 999999999999999
Q ss_pred CceeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccc-cCCCCChhhhhhcCCCCCCCeEEEEec
Q 018226 155 GAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEIS-VGKAVPVWYNMVNQGLVNEPVFSFWFN 233 (359)
Q Consensus 155 gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s-~~~~~~~~~~l~~~g~i~~~~fs~~l~ 233 (359)
|++.|.++.|+|++++..++++.||++... +..|....++||||||++..+ ....++++++|++||.| +++||+||+
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999887 444555678999999999887 66678899999999999 999999999
Q ss_pred CCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHH
Q 018226 234 RNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNH 313 (359)
Q Consensus 234 ~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~ 313 (359)
+..+....|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|.|+++.+. ..++.+||||||+++++|++++++|++
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 874333479999999999999999999999999999999999999998864 567899999999999999999999999
Q ss_pred HhCCC----c--eE-EecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 314 AIGAT----G--IV-SQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 314 ~i~~~----~--~~-~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++++. + .| .+||+. +.+.||+..++++++++... ...+|+
T Consensus 238 ~~~~~~~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~-----~~~~C~ 290 (330)
T 1yg9_A 238 AIGCVVEKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQ-----NGNLCY 290 (330)
T ss_dssp HHTCEEEECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEE-----ETTEEE
T ss_pred HhCCcccCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhccc-----CCCcEE
Confidence 99885 5 78 999996 34578887777665544332 266786
No 17
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=5.4e-49 Score=370.58 Aligned_cols=264 Identities=33% Similarity=0.620 Sum_probs=225.7
Q ss_pred ecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCc-eeeeEE
Q 018226 84 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFS 162 (359)
Q Consensus 84 n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs-~~G~~~ 162 (359)
++.+.+|+++|+||||+|++.|++||||+++||+|+.|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45588999999999999999999999999999999999744 777889999999999999999999999998 899999
Q ss_pred EEEEEeceeEecCcEEEEEEeecCccccccccccccCCCcccccc-CCCCChhhhhhcCCCCCCCeEEEEecCCCCCCCC
Q 018226 163 EDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV-GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEG 241 (359)
Q Consensus 163 ~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~-~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 241 (359)
.|+|++++..++++.||++....+. +....++||||||++..+. ...++++++|++||+|.+++||+||++.. ....
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCC
Confidence 9999999999999999999876542 4444589999999998764 35678999999999999999999997642 1248
Q ss_pred cEEEECcCCCCCeeeceEEEecC-CCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCC--
Q 018226 242 GEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT-- 318 (359)
Q Consensus 242 g~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~-- 318 (359)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+||+ .+ +...+.+||||||+++++|+++++++.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~ 243 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASDN 243 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcccC
Confidence 99999999999999999999996 5789999999999999 33 467789999999999999999999999998765
Q ss_pred --ceEEecCCcc-----cccccceeeehhhccccchhhcccccceee
Q 018226 319 --GIVSQECKAV-----VSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 319 --~~~~~~C~~~-----~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+.|.+||+.. .+.|++..++++.+++.-. ....+|+
T Consensus 244 ~~g~~~~~C~~~~~p~i~f~f~g~~~~ip~~~~~~~----~~~~~C~ 286 (325)
T 2apr_A 244 GDGTYTISCDTSAFKPLVFSINGASFQVSPDSLVFE----EFQGQCI 286 (325)
T ss_dssp SSSCEEECSCGGGCCCEEEEETTEEEEECGGGGEEE----EETTEEE
T ss_pred CCCeEEEECCCCCCCcEEEEECCEEEEECHHHEEEc----CCCCeEE
Confidence 6799999864 4477766666655444321 1266786
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.4e-48 Score=369.86 Aligned_cols=264 Identities=27% Similarity=0.456 Sum_probs=229.2
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCC--CCCCcccCCCccccCCCCCCceeCCceEEEEcCCC
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK--CYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~--C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~g 155 (359)
..+||.|. +..|+++|+||||||++.|++||||+++||+++. |..+..|..++.|++++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 45789887 5689999999999999999999999999999764 76555899899999999999999999999999999
Q ss_pred c-eeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCcccccc----------CCCCChhhhhhcCCCCC
Q 018226 156 A-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV----------GKAVPVWYNMVNQGLVN 224 (359)
Q Consensus 156 s-~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~----------~~~~~~~~~l~~~g~i~ 224 (359)
+ +.|.++.|+|++++..++++.||++..... .+||||||++..+. ...++++++|++||.|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 4 899999999999999999999999987653 58999999988753 22456899999999999
Q ss_pred CCeEEEEecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccC
Q 018226 225 EPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGP 304 (359)
Q Consensus 225 ~~~fs~~l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP 304 (359)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|.|+++.+.. ...++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 34899999999999999999999999999999999999999998752 3789999999999999
Q ss_pred HHHHHHHHHHhCCC--------ceEEecCCc-----cccccc-ceeeehhhccccchhhcccccceee
Q 018226 305 TTIITQVNHAIGAT--------GIVSQECKA-----VVSQYG-EEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 305 ~~~~~~i~~~i~~~--------~~~~~~C~~-----~~~~fg-~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
++++++|++++++. +.|.+||+. +.+.|+ +..++++++++..+ ...++|+
T Consensus 230 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~p~i~f~f~~g~~~~v~~~~~~~~----~~~~~C~ 293 (339)
T 3fv3_A 230 SDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYVYQ----NGDGTCL 293 (339)
T ss_dssp HHHHHHHHHHHTCEEEEEETTEEEEEECTTCCCCSEEEEEETTSCEEEEEGGGGEEE----CSSSCEE
T ss_pred HHHHHHHHHHcCCEEccccccCceEEEecCCCCCCcEEEEECCCCEEEECHHHheee----CCCCeEE
Confidence 99999999999864 568899997 455785 66777776655432 2567785
No 19
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.3e-48 Score=368.56 Aligned_cols=265 Identities=28% Similarity=0.406 Sum_probs=224.1
Q ss_pred ecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCcee-CCceEEEEcCCCc-eeeeE
Q 018226 84 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKK-NGKSADIHYGTGA-ISGFF 161 (359)
Q Consensus 84 n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~-~~~~~~~~y~~gs-~~G~~ 161 (359)
++.+..|+++|+||||+|++.|++||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 345788999999999999999999999999999999996 34567788999999999998 6899999999998 89999
Q ss_pred EEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccC---CCCChhhhhhcCCCCCCCeEEEEecCCCCC
Q 018226 162 SEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG---KAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (359)
Q Consensus 162 ~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~---~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 238 (359)
+.|+|++++..++++.||++....+..+....++||||||++..+.. ..++++++|+++ |.+++||+||++.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 99999999999999999999876543222356799999999987652 357899999986 8899999999874
Q ss_pred CCCcEEEECcCCCCCeeeceEEEecC-CCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHh-C
Q 018226 239 EEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI-G 316 (359)
Q Consensus 239 ~~~g~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~ 316 (359)
..|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.||++.+ +...+.+||||||+++++|++++++|++++ +
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2899999999999999999999996 5789999999999999876 456789999999999999999999999999 5
Q ss_pred CC-----ceEEecCCc----ccccccceeeehhhccccchhhcccccceee
Q 018226 317 AT-----GIVSQECKA----VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 317 ~~-----~~~~~~C~~----~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+. +.|.+||+. +.+.|++..++++.+++.-... .....+|+
T Consensus 242 a~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~ip~~~~~~~~~-~~~~~~C~ 291 (329)
T 3c9x_A 242 AQYDNQQEGVVFDCDEDLPSFSFGVGSSTITIPGDLLNLTPL-EEGSSTCF 291 (329)
T ss_dssp CEEETTTTEEEEETTCCCCCEEEEETTEEEEECGGGGEEEES-STTCSEEE
T ss_pred cEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeecc-CCCCCeEE
Confidence 43 679999984 4557887777766655432110 11246886
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5.2e-48 Score=366.38 Aligned_cols=268 Identities=28% Similarity=0.447 Sum_probs=229.6
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCC--CCCC------CcccCCCccccCCCCCCceeCCceEE
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS--KCYF------SIACYFHSKYRSGRSSTYKKNGKSAD 149 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~--~C~~------~~~C~~~~~f~~~~Sst~~~~~~~~~ 149 (359)
..+||.| .+..|+++|+||||+|++.|++||||+++||+++ .|.. +..|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 4788999999999999999999999999999976 5752 34798889999999999999999999
Q ss_pred EEcCCCc-eeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccC--CCCChhhhhhcCCCCCCC
Q 018226 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEP 226 (359)
Q Consensus 150 ~~y~~gs-~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~ 226 (359)
+.|++|+ +.|.++.|+|++++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998653 4689999999886542 245789999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHH
Q 018226 227 VFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (359)
Q Consensus 227 ~fs~~l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 306 (359)
+||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.||++.+. ....+||||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHH
Confidence 9999998752 3489999999999999999999999998999999999999998874 3478999999999999999
Q ss_pred HHHHHHHHhCCC--------ceEEecCCc---ccccc-cceeeehhhccccchhhc--ccccceee
Q 018226 307 IITQVNHAIGAT--------GIVSQECKA---VVSQY-GEEIINMLLAKVSAKLSL--RHYKKWLI 358 (359)
Q Consensus 307 ~~~~i~~~i~~~--------~~~~~~C~~---~~~~f-g~~~~~~~~~~~~~~~~~--~~~~~~~~ 358 (359)
++++|++++++. +.|.+||+. +.+.| |+..++++++++.-.... .....+|+
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~ 295 (342)
T 2qzx_A 230 IVRNILYAIGAQMKFDSAGNKVYVADCKTSGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCE 295 (342)
T ss_dssp HHHHHHHHHTCEEEECTTSCEEEEECTTCCCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEE
T ss_pred HHHHHHHHhCCeeeeccCCCcEEEEECCCCCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccE
Confidence 999999999874 278999985 45578 677888877666543221 12346886
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.2e-48 Score=367.02 Aligned_cols=262 Identities=29% Similarity=0.424 Sum_probs=220.9
Q ss_pred CCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCcee-CCceEEEEcCCCc-eeeeEEE
Q 018226 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKK-NGKSADIHYGTGA-ISGFFSE 163 (359)
Q Consensus 86 ~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~-~~~~~~~~y~~gs-~~G~~~~ 163 (359)
.+..|+++|+||||+|++.|++||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ +.|.++.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 4788999999999999999999999999999999997 3456 788999999999998 6899999999998 8999999
Q ss_pred EEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccC---CCCChhhhhhcCCCCCCCeEEEEecCCCCCCC
Q 018226 164 DHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG---KAVPVWYNMVNQGLVNEPVFSFWFNRNADEEE 240 (359)
Q Consensus 164 D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~---~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~ 240 (359)
|+|++++..++++.||++....+..+....++||||||++..+.. ..++++++|+++ |.+++||+||++. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 999999999999999999876543232356799999999987652 467899999987 8899999999874 2
Q ss_pred CcEEEECcCCCCCeeeceEEEecC-CCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHh-CCC
Q 018226 241 GGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI-GAT 318 (359)
Q Consensus 241 ~g~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~~~ 318 (359)
.|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+||++.+ +...+.+||||||+++++|++++++|++++ ++.
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTF--KSTSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCC--EEEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeec--cCCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 899999999999999999999996 6789999999999999865 345679999999999999999999999999 543
Q ss_pred -----ceEEecCCc----ccccccceeeehhhccccchhhcccccceee
Q 018226 319 -----GIVSQECKA----VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 319 -----~~~~~~C~~----~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+.|.+||+. +.+.||+..++++.+++.-... .....+|+
T Consensus 243 ~~~~~g~~~~~C~~~~P~i~f~fgg~~~~ip~~~~~~~~~-~~~~~~C~ 290 (329)
T 1oew_A 243 SSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPI-STGSSSCF 290 (329)
T ss_dssp EETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEES-STTCSEEE
T ss_pred EcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeec-CCCCCeEE
Confidence 679999985 3457888777766544432110 11246886
No 22
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=8.9e-48 Score=363.60 Aligned_cols=256 Identities=28% Similarity=0.475 Sum_probs=224.0
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCC--CCCC------CcccCCCccccCCCCCCceeCCceEE
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS--KCYF------SIACYFHSKYRSGRSSTYKKNGKSAD 149 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~--~C~~------~~~C~~~~~f~~~~Sst~~~~~~~~~ 149 (359)
..+||.|. +..|+++|+||||||++.|++||||+++||+++ .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45789887 788999999999999999999999999999976 6753 24798889999999999999999999
Q ss_pred EEcCCCc-eeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccC--CCCChhhhhhcCCCCCCC
Q 018226 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEP 226 (359)
Q Consensus 150 ~~y~~gs-~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~ 226 (359)
+.|++|+ +.|.++.|+|++++..++++.||++.... ..+||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998653 5689999999876542 345789999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHH
Q 018226 227 VFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (359)
Q Consensus 227 ~fs~~l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 306 (359)
+||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.||++.+. .++.+||||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 3489999999999999999999999998999999999999998874 3478999999999999999
Q ss_pred HHHHHHHHhCCC-----ceEE-ecCCc---ccccc-cceeeehhhccccc
Q 018226 307 IITQVNHAIGAT-----GIVS-QECKA---VVSQY-GEEIINMLLAKVSA 346 (359)
Q Consensus 307 ~~~~i~~~i~~~-----~~~~-~~C~~---~~~~f-g~~~~~~~~~~~~~ 346 (359)
++++|++++++. +.|. ++|+. +.+.| |+..++++++++.-
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~y~~ 279 (334)
T 1j71_A 230 TADKFARIVGATWDSRNEIYRLPSCDLSGDAVFNFDQGVKITVPLSELIL 279 (334)
T ss_dssp HHHHHHHHHTCEEETTTTEEECSSSCCCSEEEEEESTTCEEEEEGGGGEE
T ss_pred HHHHHHHHcCCcccCCCceEEEEcCCCCCceEEEEcCCcEEEECHHHhee
Confidence 999999999885 4788 99985 45577 56777777655543
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=5e-48 Score=366.47 Aligned_cols=269 Identities=26% Similarity=0.438 Sum_probs=227.5
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCC--CC------CCcccCCCccccCCCCCCceeCCceEE
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK--CY------FSIACYFHSKYRSGRSSTYKKNGKSAD 149 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~--C~------~~~~C~~~~~f~~~~Sst~~~~~~~~~ 149 (359)
..+||.+. +.+|+++|+||||||++.|++||||+++||+++. |. ....|..++.|++++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45788886 6789999999999999999999999999999764 63 245898899999999999999999999
Q ss_pred EEcCCCc-eeeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccC-CCCChhhhhhcCCCCCCCe
Q 018226 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG-KAVPVWYNMVNQGLVNEPV 227 (359)
Q Consensus 150 ~~y~~gs-~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~-~~~~~~~~l~~~g~i~~~~ 227 (359)
+.|++|+ +.|.++.|+|++++..++++.||++.... ..+||||||++..+.. ..++++++|++||.|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998653 4689999999886543 3467899999999999999
Q ss_pred EEEEecCCCCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHH
Q 018226 228 FSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (359)
Q Consensus 228 fs~~l~~~~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 307 (359)
||+||++.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|.|+++.+.. .+..++|||||+++++|+++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 24799999999999999999999999989999999999999998753 35799999999999999999
Q ss_pred HHHHHHHhCCC--------ceEEecCCcc---ccccc-ceeeehhhccccchhhcccc--cceee
Q 018226 308 ITQVNHAIGAT--------GIVSQECKAV---VSQYG-EEIINMLLAKVSAKLSLRHY--KKWLI 358 (359)
Q Consensus 308 ~~~i~~~i~~~--------~~~~~~C~~~---~~~fg-~~~~~~~~~~~~~~~~~~~~--~~~~~ 358 (359)
+++|++++++. +.|.+||+.. .+.|+ +..++++++++......... ..+|+
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~ 295 (342)
T 3pvk_A 231 ADQIIKAFNGKLTQDSNGNSFYEVDCNLSGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQ 295 (342)
T ss_dssp HHHHHHHTTCEEEECTTSCEEEEECSCCCSEEEEEESTTCEEEEEGGGGEEC----------CEE
T ss_pred HHHHHHHcCCeecccCCCceEEEEecCCCCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeE
Confidence 99999999875 2499999964 55787 56677777666544322221 36786
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=9.8e-47 Score=354.80 Aligned_cols=261 Identities=27% Similarity=0.397 Sum_probs=221.6
Q ss_pred EeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCc-ee
Q 018226 80 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-IS 158 (359)
Q Consensus 80 ~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs-~~ 158 (359)
.|+. .+.+|+++|+|| ||++.|++||||+++||+|+.|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.
T Consensus 9 ~~~~--~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~ 82 (323)
T 1izd_A 9 NPTS--NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSAS 82 (323)
T ss_dssp EECG--GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEE
T ss_pred eEcC--CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEE
Confidence 4553 478899999999 89999999999999999999997 4467788999999999 7777899999999998 89
Q ss_pred eeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCcccccc---CCCCChhhhhhcCCCCCCCeEEEEecCC
Q 018226 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRN 235 (359)
Q Consensus 159 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~ 235 (359)
|.++.|+|++++.+++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||++.
T Consensus 83 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~ 160 (323)
T 1izd_A 83 GDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN 160 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT
T ss_pred EEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC
Confidence 9999999999999999999999998754333335679999999998775 2567899999987 8999999999874
Q ss_pred CCCCCCcEEEECcCCCCCeeeceEEEecC-CCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHH
Q 018226 236 ADEEEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHA 314 (359)
Q Consensus 236 ~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~ 314 (359)
..|+|+|||+|+++|+|+++|+|+. ..++|.|++++|.||+ .+ +..++.+||||||+++++|++++++|+++
T Consensus 161 ----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~ 233 (323)
T 1izd_A 161 ----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQ 233 (323)
T ss_dssp ----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTT
T ss_pred ----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHh
Confidence 2899999999999999999999996 6789999999999999 44 56788999999999999999999999999
Q ss_pred h-CCC-----ceEEecCCc----ccccccceeeehhhccccchhhcccccceee
Q 018226 315 I-GAT-----GIVSQECKA----VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 315 i-~~~-----~~~~~~C~~----~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+ ++. +.|.+||+. +.+.||+..++++.+++.-. .....+|+
T Consensus 234 i~ga~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~---~~~~~~C~ 284 (323)
T 1izd_A 234 VNGASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFA---DVGNGQTF 284 (323)
T ss_dssp STTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEE---ECSTTEEE
T ss_pred CCCcEEcCcCCEEEEECCCCCceEEEEECCEEEecCHHHeEEe---cCCCCeEE
Confidence 9 443 679999985 34578888777766544321 11356786
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-46 Score=352.34 Aligned_cols=260 Identities=27% Similarity=0.404 Sum_probs=220.8
Q ss_pred CCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCc-eeeeEEEE
Q 018226 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFSED 164 (359)
Q Consensus 86 ~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs-~~G~~~~D 164 (359)
.+.+|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.++.|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478899999999 89999999999999999999997 4467788999999999 7768999999999998 89999999
Q ss_pred EEEeceeEecCcEEEEEEeecCccccccccccccCCCcccccc---CCCCChhhhhhcCCCCCCCeEEEEecCCCCCCCC
Q 018226 165 HVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEG 241 (359)
Q Consensus 165 ~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 241 (359)
+|++++..++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||++. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999988654333335779999999998775 2467899999987 8899999999874 28
Q ss_pred cEEEECcCCCCCeeeceEEEecC-CCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHh-CCC-
Q 018226 242 GEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI-GAT- 318 (359)
Q Consensus 242 g~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~~~- 318 (359)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.||++.+ +..++.+||||||+++++|++++++|++++ ++.
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999996 6789999999999999866 456789999999999999999999999999 553
Q ss_pred ----ceEEecCCc----ccccccceeeehhhccccchhhcccccceee
Q 018226 319 ----GIVSQECKA----VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 319 ----~~~~~~C~~----~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+.|.+||+. +.+.||+..++++.+++.-... .....+|+
T Consensus 240 ~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~-~~~~~~C~ 286 (325)
T 1ibq_A 240 SYEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYINYAPV-STGSSTCY 286 (325)
T ss_dssp CSSSSSCEEETTCCCCCEEEEETTEEEEECHHHHEEEES-STTCSEEE
T ss_pred cCcCCeEEEEcCCCCCcEEEEECCEEEEECHHHhccccc-CCCCCeEE
Confidence 678999985 3557888877776654432110 11246886
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=8.9e-47 Score=355.13 Aligned_cols=261 Identities=24% Similarity=0.384 Sum_probs=220.0
Q ss_pred EeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCc-ee
Q 018226 80 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-IS 158 (359)
Q Consensus 80 ~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs-~~ 158 (359)
.|+. .+..|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.
T Consensus 9 ~~~~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~ 82 (323)
T 1bxo_A 9 TPTA--NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSAS 82 (323)
T ss_dssp EECG--GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEE
T ss_pred eecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEE
Confidence 4543 478899999999 89999999999999999999996 4467788999999999 7778899999999998 89
Q ss_pred eeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCccccccC---CCCChhhhhhcCCCCCCCeEEEEecCC
Q 018226 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG---KAVPVWYNMVNQGLVNEPVFSFWFNRN 235 (359)
Q Consensus 159 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~---~~~~~~~~l~~~g~i~~~~fs~~l~~~ 235 (359)
|.++.|+|++++..++++.||++....+..+....++||||||++..+.. ..++++++|+++ |.+++||+||++.
T Consensus 83 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~ 160 (323)
T 1bxo_A 83 GNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ 160 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS
T ss_pred EEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC
Confidence 99999999999999999999999876543333356799999999987652 467899999987 8999999999874
Q ss_pred CCCCCCcEEEECcCCCCCeeeceEEEecC-CCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHH
Q 018226 236 ADEEEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHA 314 (359)
Q Consensus 236 ~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~ 314 (359)
..|+|+|||+|+++|+|+++|+|+. ..++|.|.+++|+||+ + +..++.+||||||+++++|++++++|+++
T Consensus 161 ----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~ 232 (323)
T 1bxo_A 161 ----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQ 232 (323)
T ss_dssp ----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTT
T ss_pred ----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHh
Confidence 2899999999999999999999996 6789999999999999 2 35678999999999999999999999999
Q ss_pred h-CCC-----ceEEecCCc----ccccccceeeehhhccccchhhcccccceee
Q 018226 315 I-GAT-----GIVSQECKA----VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 315 i-~~~-----~~~~~~C~~----~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
+ ++. +.|.+||+. +.+.||+..++++.+++.-.. .....+|+
T Consensus 233 i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~l~~~~~~~~~--~~~~~~C~ 284 (323)
T 1bxo_A 233 VSGAQQDSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGP--SGDGSTCL 284 (323)
T ss_dssp STTCEEETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEEE--CSSSSCEE
T ss_pred CCCceEcCcCCEEEEECCCCCceEEEEECCEEEEECHHHeEEec--cCCCCeEE
Confidence 9 553 679999985 355788877777665443211 11346786
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=8.3e-47 Score=371.09 Aligned_cols=243 Identities=27% Similarity=0.407 Sum_probs=205.2
Q ss_pred EeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCceee
Q 018226 80 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISG 159 (359)
Q Consensus 80 ~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~G 159 (359)
.+|.+..+..|+++|+||||||+|.|+|||||+++||+|..| |..++.|++++|+||+..++.|.+.|++|++.|
T Consensus 66 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 140 (455)
T 3lpj_A 66 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 140 (455)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred ccccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEE
Confidence 356666778999999999999999999999999999999887 566889999999999999999999999999999
Q ss_pred eEEEEEEEece-eEec-CcEEEEEEeecCccccccccccccCCCccccccC--CCCChhhhhhcCCCCCCCeEEEEecCC
Q 018226 160 FFSEDHVKIGD-LVVK-DQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWFNRN 235 (359)
Q Consensus 160 ~~~~D~v~~g~-~~~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~~fs~~l~~~ 235 (359)
.++.|+|+|++ ..+. .+.|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||++.
T Consensus 141 ~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~ 219 (455)
T 3lpj_A 141 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 219 (455)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEeccc
Confidence 99999999984 2222 2567777655433223357799999999988754 3688999999999997 9999999864
Q ss_pred CC--------CCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeec---CCeeEEEccCCCCcccC
Q 018226 236 AD--------EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGP 304 (359)
Q Consensus 236 ~~--------~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~---~~~~aiiDTGt~~i~lP 304 (359)
.. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.||++.+.+.. ..+.+||||||+++++|
T Consensus 220 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 299 (455)
T 3lpj_A 220 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 299 (455)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEE
T ss_pred cccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCC
Confidence 11 23489999999999999999999999999999999999999999875432 25789999999999999
Q ss_pred HHHHHHHHHHhCCC-----------ceEEecCCcc
Q 018226 305 TTIITQVNHAIGAT-----------GIVSQECKAV 328 (359)
Q Consensus 305 ~~~~~~i~~~i~~~-----------~~~~~~C~~~ 328 (359)
++++++|++++++. ..|.++|...
T Consensus 300 ~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~ 334 (455)
T 3lpj_A 300 KKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQA 334 (455)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEEST
T ss_pred HHHHHHHHHHhhhhccccccCcccccCcceecccc
Confidence 99999999999764 1236899863
No 28
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-45 Score=346.71 Aligned_cols=245 Identities=26% Similarity=0.499 Sum_probs=211.3
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCce
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~ 157 (359)
..+||+|+ +..|+++|+||||||++.|++||||+++||+|. +.|+|++|++ ..++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcEE
Confidence 45899998 568999999999999999999999999999743 4689887774 457899999999999
Q ss_pred eeeEEEEEEEeceeEecCcEEEEEEeecCccccccccccccCCCcccccc--------CCCCChhhhhhcCCCCCCCeEE
Q 018226 158 SGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--------GKAVPVWYNMVNQGLVNEPVFS 229 (359)
Q Consensus 158 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--------~~~~~~~~~l~~~g~i~~~~fs 229 (359)
+|.++.|+|++++..++++.||++....+ + ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999987653 2 2579999999998765 3457899999999999999999
Q ss_pred EEecCCC-CCCCCcEEEECcCCCCCeeeceEEEecCC----CCceEEEEceEEECC-eEeeeecCCeeEEEccCCCCccc
Q 018226 230 FWFNRNA-DEEEGGEIVFGGMDPDHYKGEHTYVPVTQ----KGYWQFDMGDVMIDG-QTTGFCAGGCAAIADSGTSLLAG 303 (359)
Q Consensus 230 ~~l~~~~-~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~----~~~w~v~~~~i~vg~-~~~~~~~~~~~aiiDTGt~~i~l 303 (359)
+||++.. +....|+|+|||+|+++|.|+++|+|+.+ .++|.|. ++|.|++ +.+. ..+.+||||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12347999999999999999999999977 7899999 9999998 7663 2468999999999999
Q ss_pred CHHHHHHHHHHhCCC-----ceEEecCCc------ccccccceeeehhhccc
Q 018226 304 PTTIITQVNHAIGAT-----GIVSQECKA------VVSQYGEEIINMLLAKV 344 (359)
Q Consensus 304 P~~~~~~i~~~i~~~-----~~~~~~C~~------~~~~fg~~~~~~~~~~~ 344 (359)
|++++++|.+++++. +.|.+||+. +.+.||+..+.+.+.++
T Consensus 221 P~~~~~~l~~~~~a~~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~y 272 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQ 272 (340)
T ss_dssp CHHHHHHHHHHHTCEECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGG
T ss_pred CHHHHHHHHHhhCCEEcCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHh
Confidence 999999999999985 679999973 45688888887766554
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=355.04 Aligned_cols=242 Identities=29% Similarity=0.474 Sum_probs=202.3
Q ss_pred EeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCceee
Q 018226 80 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISG 159 (359)
Q Consensus 80 ~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~G 159 (359)
.+|++..+..|+++|+||||||+|.|++||||+++||+|..|. .| ++.|++++|+||+..++.|.+.|++|++.|
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G 79 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTG 79 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEE
Confidence 3678888889999999999999999999999999999999885 34 578999999999999999999999999999
Q ss_pred eEEEEEEEeceeEec--CcEEEEEEeecCccccccccccccCCCcccccc--CCCCChhhhhhcCCCCCCCeEEEEecCC
Q 018226 160 FFSEDHVKIGDLVVK--DQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSFWFNRN 235 (359)
Q Consensus 160 ~~~~D~v~~g~~~~~--~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--~~~~~~~~~l~~~g~i~~~~fs~~l~~~ 235 (359)
.++.|+|++++.... ++.|++.....+.......++||||||++..+. ...++++++|++|+.| +++||+||++.
T Consensus 80 ~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~ 158 (383)
T 2ewy_A 80 FVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGA 158 (383)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC
T ss_pred EEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeecc
Confidence 999999999863222 245676654433211234679999999998775 4577899999999999 79999999752
Q ss_pred -----CCCCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecC---CeeEEEccCCCCcccCHHH
Q 018226 236 -----ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAG---GCAAIADSGTSLLAGPTTI 307 (359)
Q Consensus 236 -----~~~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~---~~~aiiDTGt~~i~lP~~~ 307 (359)
......|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.||++.+.+... ...+||||||+++++|+++
T Consensus 159 ~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 238 (383)
T 2ewy_A 159 GLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKV 238 (383)
T ss_dssp ---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHH
T ss_pred ccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHH
Confidence 12235899999999999999999999999999999999999999998754322 4689999999999999999
Q ss_pred HHHHHHHhCCC--------c---eEEecCCc
Q 018226 308 ITQVNHAIGAT--------G---IVSQECKA 327 (359)
Q Consensus 308 ~~~i~~~i~~~--------~---~~~~~C~~ 327 (359)
+++|++++++. + .|.++|..
T Consensus 239 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~ 269 (383)
T 2ewy_A 239 FDAVVEAVARASLIPEFSDGFWTGSQLACWT 269 (383)
T ss_dssp HHHHHHHHHHTTCSSCCCHHHHHTSEEEEEC
T ss_pred HHHHHHHHhhhcccccCcccccccccccccc
Confidence 99999999764 1 24789975
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3e-45 Score=354.73 Aligned_cols=242 Identities=28% Similarity=0.432 Sum_probs=200.9
Q ss_pred eeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCceeee
Q 018226 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF 160 (359)
Q Consensus 81 ~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~G~ 160 (359)
.|.+..+..|+++|+||||||+|.|++||||+++||+|..| |..++.|++++|+||+..++.|.+.|++|++.|.
T Consensus 21 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 95 (402)
T 3vf3_A 21 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 95 (402)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEE
Confidence 34455567899999999999999999999999999999887 5567899999999999999999999999999999
Q ss_pred EEEEEEEece-eEecC-cEEEEEEeecCccccccccccccCCCccccccCC--CCChhhhhhcCCCCCCCeEEEEecCCC
Q 018226 161 FSEDHVKIGD-LVVKD-QEFIEATREPSLTFLLAKFDGILGLGFQEISVGK--AVPVWYNMVNQGLVNEPVFSFWFNRNA 236 (359)
Q Consensus 161 ~~~D~v~~g~-~~~~~-~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~--~~~~~~~l~~~g~i~~~~fs~~l~~~~ 236 (359)
++.|+|+|++ ..+.. +.|++.............++||||||++..+... .++++++|++|+.|+ ++||+||++..
T Consensus 96 ~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~ 174 (402)
T 3vf3_A 96 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 174 (402)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC
T ss_pred EEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeeccc
Confidence 9999999984 44443 3466665544322234577999999999887643 688999999999997 99999997531
Q ss_pred -----C---CCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeec---CCeeEEEccCCCCcccCH
Q 018226 237 -----D---EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPT 305 (359)
Q Consensus 237 -----~---~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~---~~~~aiiDTGt~~i~lP~ 305 (359)
. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.+.. ..+.+||||||+++++|.
T Consensus 175 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 254 (402)
T 3vf3_A 175 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 254 (402)
T ss_dssp -------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred ccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCH
Confidence 0 23479999999999999999999999999999999999999999876432 256899999999999999
Q ss_pred HHHHHHHHHhCCC--------c---eEEecCCcc
Q 018226 306 TIITQVNHAIGAT--------G---IVSQECKAV 328 (359)
Q Consensus 306 ~~~~~i~~~i~~~--------~---~~~~~C~~~ 328 (359)
+++++|++++++. + .|.++|...
T Consensus 255 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~ 288 (402)
T 3vf3_A 255 KVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQA 288 (402)
T ss_dssp HHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEET
T ss_pred HHHHHHHHHHhhhccccccCcccccccccccccc
Confidence 9999999999654 1 236899853
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.4e-44 Score=347.65 Aligned_cols=243 Identities=28% Similarity=0.414 Sum_probs=202.0
Q ss_pred EeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCceee
Q 018226 80 VALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISG 159 (359)
Q Consensus 80 ~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs~~G 159 (359)
.+|.+..+..|+++|+||||||+|.|++||||+++||+|..|. .| ++.|++++|+||+..++.|.+.|++|++.|
T Consensus 13 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 87 (395)
T 2qp8_A 13 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 87 (395)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEE
Confidence 3566667889999999999999999999999999999999885 33 678999999999999999999999999999
Q ss_pred eEEEEEEEec-eeEec-CcEEEEEEeecCccccccccccccCCCccccccC--CCCChhhhhhcCCCCCCCeEEEEecCC
Q 018226 160 FFSEDHVKIG-DLVVK-DQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWFNRN 235 (359)
Q Consensus 160 ~~~~D~v~~g-~~~~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~~fs~~l~~~ 235 (359)
.++.|+|+++ +..++ .+.|++.............++||||||++..+.. ..++++++|++|+.|+ ++||+||++.
T Consensus 88 ~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 88 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 9999999998 55443 2556666543322112346799999999987643 4678999999999996 8999999864
Q ss_pred CC--------CCCCcEEEECcCCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeec---CCeeEEEccCCCCcccC
Q 018226 236 AD--------EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGP 304 (359)
Q Consensus 236 ~~--------~~~~g~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~---~~~~aiiDTGt~~i~lP 304 (359)
.- ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+||++.+.+.. ....+||||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 10 12479999999999999999999999999999999999999999875432 24689999999999999
Q ss_pred HHHHHHHHHHhCCC--------ce---EEecCCcc
Q 018226 305 TTIITQVNHAIGAT--------GI---VSQECKAV 328 (359)
Q Consensus 305 ~~~~~~i~~~i~~~--------~~---~~~~C~~~ 328 (359)
++++++|++++++. +. |.++|...
T Consensus 247 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~ 281 (395)
T 2qp8_A 247 KKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQA 281 (395)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEEST
T ss_pred HHHHHHHHHHHhhhcccccCCcccccccccccccc
Confidence 99999999999753 11 36899753
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.6e-42 Score=334.11 Aligned_cols=267 Identities=15% Similarity=0.183 Sum_probs=205.8
Q ss_pred ceeEeee-ecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCC-----------CCCCCcccCCCccc------cCCCC
Q 018226 77 ADIVALK-NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS-----------KCYFSIACYFHSKY------RSGRS 138 (359)
Q Consensus 77 ~~~~~l~-n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~-----------~C~~~~~C~~~~~f------~~~~S 138 (359)
...+||+ |+.+.+|+++|.||||||+|.|+|||||+++||+|. .|. +..|..++.| ++.+|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3458999 888999999999999999999999999999999999 564 4568777777 55444
Q ss_pred CCceeCCceEEEEcC-CCc-eeeeEEEEEEEece-----------eEecCcEEEEEEeecCccccccccccccCCCcccc
Q 018226 139 STYKKNGKSADIHYG-TGA-ISGFFSEDHVKIGD-----------LVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEI 205 (359)
Q Consensus 139 st~~~~~~~~~~~y~-~gs-~~G~~~~D~v~~g~-----------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~ 205 (359)
+ +....|.|.+.|+ +++ +.|.+++|+|++++ ..++++.||++.......+....++||||||++..
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 5556789999998 555 89999999999998 88999999999875322133457899999999876
Q ss_pred ccCCCCChhhhhhcCCCCCCCeEEEEecCCCCCCCCcEEEECcCCCCCe--e-e-----ceEEEecCCC--CceEEEEce
Q 018226 206 SVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHY--K-G-----EHTYVPVTQK--GYWQFDMGD 275 (359)
Q Consensus 206 s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~g~l~~Gg~d~~~~--~-g-----~l~~~p~~~~--~~w~v~~~~ 275 (359)
+ +..+| +++.+.+++||+||.+.. ...|+|+||| |+++| + | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql-~~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQL-ASHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHH-HHHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHH-HhhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 55555 455677899999998852 3489999999 99888 6 6 9999999765 899999999
Q ss_pred EEECCeEe-eeecC--------CeeEEEccCCCCcccCHHHHHHHHHHh----CC--------CceEEecCCc------c
Q 018226 276 VMIDGQTT-GFCAG--------GCAAIADSGTSLLAGPTTIITQVNHAI----GA--------TGIVSQECKA------V 328 (359)
Q Consensus 276 i~vg~~~~-~~~~~--------~~~aiiDTGt~~i~lP~~~~~~i~~~i----~~--------~~~~~~~C~~------~ 328 (359)
|.||++.+ ..... ...+||||||+++++|++++++|.+++ ++ ...|-++|+. +
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i 316 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSV 316 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCE
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcE
Confidence 99999887 43221 235999999999999999999999999 43 1236789985 3
Q ss_pred cccccce---eeehhhccccchhhcccccceee
Q 018226 329 VSQYGEE---IINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 329 ~~~fg~~---~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
.+.|++. .++++++++... .....+|+
T Consensus 317 ~f~f~g~~~~~~~l~~~~y~~~---~~~~~~C~ 346 (403)
T 3aup_A 317 DLVMDKPNGPVWRISGEDLMVQ---AQPGVTCL 346 (403)
T ss_dssp EEEESSTTCCEEEECHHHHEEE---C---CEEE
T ss_pred EEEEcCCCceEEEEcccceEEE---cCCCeEEE
Confidence 4577764 555554433221 11245785
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.8e-41 Score=327.17 Aligned_cols=232 Identities=19% Similarity=0.206 Sum_probs=190.3
Q ss_pred CceeEeeeec-CCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCC----------CCcccCCCccccCCC-----CC
Q 018226 76 DADIVALKNY-MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY----------FSIACYFHSKYRSGR-----SS 139 (359)
Q Consensus 76 ~~~~~~l~n~-~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~----------~~~~C~~~~~f~~~~-----Ss 139 (359)
....+|++.. .+.+|+++|+||||||+|.|++||||+++||+|..|. .+..|..++.|++.. ++
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence 3455788754 4779999999999999999999999999999996542 145677777887643 34
Q ss_pred CceeCCceEEEEcC-CCc-eeeeEEEEEEEec---------eeEecCcEEEEEEeecCccccccccccccCCCccccccC
Q 018226 140 TYKKNGKSADIHYG-TGA-ISGFFSEDHVKIG---------DLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG 208 (359)
Q Consensus 140 t~~~~~~~~~~~y~-~gs-~~G~~~~D~v~~g---------~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 208 (359)
++....|.|.+.|+ +++ +.|++++|+|+|+ +..++++.|||+...... .....++||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~-g~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQ-NLASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGT-TSCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccccccc-CcccccccccccCCCCcc--
Confidence 56667799999995 655 7999999999997 367889999999875321 123568999999998876
Q ss_pred CCCChhhhhhcCCCCCCCeEEEEecCCCCCCCCcEEEECcCCCCC-----eeec-eEEEecCCC--------------Cc
Q 018226 209 KAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDH-----YKGE-HTYVPVTQK--------------GY 268 (359)
Q Consensus 209 ~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~g~l~~Gg~d~~~-----~~g~-l~~~p~~~~--------------~~ 268 (359)
+..+|.+++.+ +++||+||.+. ...+|+|+|||+|..+ +.|+ ++|+|+... .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 77789999888 89999999985 2348999999998753 7889 999999764 79
Q ss_pred eEEEEceEEECCeEeeeec--------CCeeEEEccCCCCcccCHHHHHHHHHHhCC
Q 018226 269 WQFDMGDVMIDGQTTGFCA--------GGCAAIADSGTSLLAGPTTIITQVNHAIGA 317 (359)
Q Consensus 269 w~v~~~~i~vg~~~~~~~~--------~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~ 317 (359)
|.|++++|+||++.+.... +++.+||||||+++++|++++++|.+++++
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~ 293 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIK 293 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHH
Confidence 9999999999999886432 457899999999999999999999988864
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=5.4e-38 Score=301.70 Aligned_cols=221 Identities=12% Similarity=0.144 Sum_probs=174.0
Q ss_pred eEeee-ecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCC-------CCcccCCCccccCCCCCCce-------e
Q 018226 79 IVALK-NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY-------FSIACYFHSKYRSGRSSTYK-------K 143 (359)
Q Consensus 79 ~~~l~-n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~-------~~~~C~~~~~f~~~~Sst~~-------~ 143 (359)
.+||+ ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46887 7778999999999997 999999999999996442 1346766667876533 332 2
Q ss_pred CCc-eEEEEcCCCc-eeeeEEEEEEEece----eEecCc----EEEEEEeecCccccccccccccCCCccccccCCCCCh
Q 018226 144 NGK-SADIHYGTGA-ISGFFSEDHVKIGD----LVVKDQ----EFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPV 213 (359)
Q Consensus 144 ~~~-~~~~~y~~gs-~~G~~~~D~v~~g~----~~~~~~----~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 213 (359)
..| .|.+.|++|+ +.|.+++|+|++++ ..++++ .|||+.......+ ...++||||||++..+ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 234 5999999998 49999999999985 466665 4698876522222 3578999999998765 6
Q ss_pred hhhhhcCCCCCCCeEEEEecCCCCCCCCcEEEECcCCCC--CeeeceEEEecCCC---CceEEEEceEEECCeEeeeecC
Q 018226 214 WYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPD--HYKGEHTYVPVTQK---GYWQFDMGDVMIDGQTTGFCAG 288 (359)
Q Consensus 214 ~~~l~~~g~i~~~~fs~~l~~~~~~~~~g~l~~Gg~d~~--~~~g~l~~~p~~~~---~~w~v~~~~i~vg~~~~~~~~~ 288 (359)
..+|.++++ .+++||+||.+. .+|+|+|||+|.. +|.|+++|+|+.+. .+|.|++++|+||++.+..+..
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 678888884 489999999875 3899999998765 58999999999753 5677999999999998764433
Q ss_pred ---CeeEEEccCCCCcccCHHHHHHHHHHhCC
Q 018226 289 ---GCAAIADSGTSLLAGPTTIITQVNHAIGA 317 (359)
Q Consensus 289 ---~~~aiiDTGt~~i~lP~~~~~~i~~~i~~ 317 (359)
.+.+||||||+++++|++++++|.+++++
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~ 257 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTK 257 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHH
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHH
Confidence 45799999999999999999988777643
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.97 E-value=9.8e-31 Score=235.69 Aligned_cols=188 Identities=38% Similarity=0.726 Sum_probs=159.0
Q ss_pred ceeEecCcEEEEEEeecCccccccccccccCCCccccccCCCCChhhhhhcCCCCCCCeEEEEecCCCCCCCCcEEEECc
Q 018226 169 GDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGG 248 (359)
Q Consensus 169 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~g~l~~Gg 248 (359)
|+.++++|.||++....+..+....++||||||++..+....++++++|++||.|.+++||+||++.......|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 46789999999999876655666788999999999888767789999999999999999999999874333489999999
Q ss_pred CCCCCeeeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHHHHHhCCC----ceEEec
Q 018226 249 MDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT----GIVSQE 324 (359)
Q Consensus 249 ~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----~~~~~~ 324 (359)
+|+++|+|+++|+|+.+.++|.|.+++|+|+++.+ .+..++.+|+||||+++++|++++++|.+++++. +.|.+|
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~-~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~ 159 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLT-LCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIP 159 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCE-ESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEETTEEEEE
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeE-eccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccCCcEEEE
Confidence 99999999999999999999999999999999875 2567889999999999999999999999999985 679999
Q ss_pred CCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 325 CKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 325 C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
|+. +.+.||+..++++++++.-... .....+|+
T Consensus 160 C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~-~~~~~~C~ 198 (241)
T 1lya_B 160 CEKVSTLPAITLKLGGKGYKLSPEDYTLKVS-QAGKTLCL 198 (241)
T ss_dssp GGGGGGSCCEEEEETTEEEEECTTTSEEEET-TTTSSEEE
T ss_pred CCCCccCCeEEEEECCEEEEECHHHhEEEcc-CCCCCeeE
Confidence 984 4568888887777765543321 11246886
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.92 E-value=2.7e-25 Score=170.95 Aligned_cols=93 Identities=66% Similarity=1.122 Sum_probs=87.0
Q ss_pred eeEeeeecCCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCC-CcccCCCccccCCCCCCceeCCceEEEEcCCCc
Q 018226 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA 156 (359)
Q Consensus 78 ~~~~l~n~~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~-~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs 156 (359)
..+||.|+.+..|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 258988999999999999999999999999999
Q ss_pred eeeeEEEEEEEece
Q 018226 157 ISGFFSEDHVKIGD 170 (359)
Q Consensus 157 ~~G~~~~D~v~~g~ 170 (359)
+.|.++.|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.97 E-value=0.067 Score=43.11 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=51.8
Q ss_pred CCceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCCc--eeeeEEE
Q 018226 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA--ISGFFSE 163 (359)
Q Consensus 86 ~~~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~gs--~~G~~~~ 163 (359)
....+++++.|+ ++++++++|||++.+.+...... .+.-....+. .+. ....|.|. ..|....
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~----~~~------~~a~g~g~~~~~~~~~~ 87 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDK----RFI------GEARGVGTGKIIGRIHQ 87 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBC----CCC-----------------CEEEEE
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCHHHHH---HcCCCccCCc----ceE------EEEecCCCcccccEEEE
Confidence 355689999999 69999999999999888532211 1111011111 110 01122222 3566667
Q ss_pred EEEEeceeEecCcEEEEEEeecCccccccccccccCCC
Q 018226 164 DHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLG 201 (359)
Q Consensus 164 D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 201 (359)
+.+.+|+...+ ..|.+.. . ..+||||+-
T Consensus 88 ~~i~ig~~~~~-~~~~vl~--~-------~~d~iLG~d 115 (148)
T 2i1a_A 88 AQVKIETQYIP-CSFTVLD--T-------DIDVLIGLD 115 (148)
T ss_dssp EEEEETTEEEE-EEEEEEC--S-------SCSEEECHH
T ss_pred EEEEECCEEec-eeEEEec--C-------CCCeEecHH
Confidence 88999987754 5554332 1 358999985
No 38
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=91.36 E-value=0.17 Score=31.56 Aligned_cols=25 Identities=20% Similarity=0.030 Sum_probs=21.5
Q ss_pred ceEEEceeeccchhhhhhhhccccc
Q 018226 29 GLYRIGLKKRKFDLNNRVAARLDSK 53 (359)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~~~~~ 53 (359)
+++||||+|.++.++.+.+.+....
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~~ 31 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDMA 31 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCGG
T ss_pred ceeEEeeeecccHHHHHHHcCchHH
Confidence 5789999999999999999876544
No 39
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=84.68 E-value=1.3 Score=33.01 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=25.5
Q ss_pred EEEEEEecCCCceEEEEeeCCCCCeeeeCCCC
Q 018226 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (359)
Q Consensus 90 y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C 121 (359)
-++.|.|| +|.+.+++|||.+++-+.....
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 46779999 6999999999999999975544
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=84.16 E-value=1.1 Score=33.70 Aligned_cols=26 Identities=19% Similarity=0.209 Sum_probs=23.6
Q ss_pred EEEEEEecCCCceEEEEeeCCCCCeeee
Q 018226 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVP 117 (359)
Q Consensus 90 y~~~i~iGtP~q~~~v~~DTGSs~~wv~ 117 (359)
-++.|.|| +|.+.+++|||..++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 46789999 799999999999999986
No 41
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=81.37 E-value=0.6 Score=27.00 Aligned_cols=23 Identities=17% Similarity=0.036 Sum_probs=19.0
Q ss_pred ceEEEceeeccchhhhhhhhccc
Q 018226 29 GLYRIGLKKRKFDLNNRVAARLD 51 (359)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~~~ 51 (359)
+++||||+|.++.++.+.+.+..
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~ 24 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQL 24 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccH
Confidence 47899999999999888876643
No 42
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=81.34 E-value=0.69 Score=28.21 Aligned_cols=24 Identities=21% Similarity=0.068 Sum_probs=19.8
Q ss_pred eEEEceeeccchhhhhhhhccccc
Q 018226 30 LYRIGLKKRKFDLNNRVAARLDSK 53 (359)
Q Consensus 30 ~~~ipl~~~~~~~~~~~~~~~~~~ 53 (359)
++||||+|.++.++.+.+.+...+
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~~~ 25 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLLGE 25 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH
T ss_pred eEEEeeeEcchHHHHHHHcCcHHH
Confidence 689999999999999888765433
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.69 E-value=2.2 Score=31.70 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=25.4
Q ss_pred EEEEEEecCCCceEEEEeeCCCCCeeeeCCCC
Q 018226 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (359)
Q Consensus 90 y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C 121 (359)
=++.|.|| +|.+.+++|||.+++-+...++
T Consensus 9 P~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 9 PVVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 46779999 7999999999999999965444
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=76.04 E-value=2.3 Score=34.06 Aligned_cols=90 Identities=16% Similarity=0.237 Sum_probs=52.3
Q ss_pred ceEEEEEEecCCCceEEEEeeCCCCCeeeeCCCCCCCcccCCCccccCCCCCCceeCCceEEEEcCCC--ceeeeEEEEE
Q 018226 88 AQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG--AISGFFSEDH 165 (359)
Q Consensus 88 ~~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~f~~~~Sst~~~~~~~~~~~y~~g--s~~G~~~~D~ 165 (359)
.-|++++.|+ ++++++++|||++.+.+...... .|.-...-+. . +. ....+.| ...|..-...
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~-~---~~------~~a~g~G~~~~~g~v~~~~ 87 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR-R---WA------GVAKGVGTQRIIGRVHLAQ 87 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG-G---GC------EECCC---CEEEEEEEEEE
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc-c---ee------EEEEcCCccEEEEEEEEEE
Confidence 4589999998 69999999999999998643211 2211000000 0 00 0112222 2467777788
Q ss_pred EEeceeEecCcEEEEEEeecCccccccccccccCCC
Q 018226 166 VKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLG 201 (359)
Q Consensus 166 v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 201 (359)
+.+|+..++ ..|.+.. ....++|||+-
T Consensus 88 I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 88 IQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 999987653 4443332 12357899985
No 45
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=75.47 E-value=2.6 Score=32.06 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=27.2
Q ss_pred EEEEEEec---CCCceEEEEeeCCCCCeeeeCCCCC
Q 018226 90 YFGEIGIG---TPPQNFTVIFDTGSSNLWVPSSKCY 122 (359)
Q Consensus 90 y~~~i~iG---tP~q~~~v~~DTGSs~~wv~~~~C~ 122 (359)
=.+.|.|| +|+|.+..++|||-+++-+...++.
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 45667777 7799999999999999999866654
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=72.86 E-value=3.6 Score=31.52 Aligned_cols=27 Identities=15% Similarity=0.091 Sum_probs=23.1
Q ss_pred EEEEEEecCCCceEEEEeeCCCCCeeeeCC
Q 018226 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSS 119 (359)
Q Consensus 90 y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 119 (359)
=++ |.|| +|.+.+++|||.+++-+...
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 455 9999 79999999999999998643
No 47
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=69.14 E-value=1.1 Score=32.15 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=23.2
Q ss_pred ceEEecCCc------ccccccceeeehhhccccchhhcccccceee
Q 018226 319 GIVSQECKA------VVSQYGEEIINMLLAKVSAKLSLRHYKKWLI 358 (359)
Q Consensus 319 ~~~~~~C~~------~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
|.|.+||++ +.+.||+..+.+.+.++..... ....++|+
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~-~~~~~~C~ 45 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVG-KGEATQCI 45 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEES-CTTTCEEE
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEcc-CCCCCEEE
Confidence 569999995 3457887777766544432211 11235786
No 48
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=66.64 E-value=6.6 Score=29.89 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=25.5
Q ss_pred EEEEEEecCCCceEEEEeeCCCCCeeeeCCCC
Q 018226 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (359)
Q Consensus 90 y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C 121 (359)
-.+.|.|| +|.+.+++|||-+++-+...+.
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 36678999 7999999999999999976554
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=65.17 E-value=8.4 Score=30.14 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=25.1
Q ss_pred eEEEEEEecCCCceEEEEeeCCCCCeeeeCCC
Q 018226 89 QYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK 120 (359)
Q Consensus 89 ~y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~ 120 (359)
.-++.+.|+ +|.+.+++|||.+++-+....
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 356779999 799999999999999986443
No 50
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=65.14 E-value=6.5 Score=31.04 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=24.0
Q ss_pred EEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHH
Q 018226 276 VMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 311 (359)
Q Consensus 276 i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 311 (359)
+.|||+.+ .+++|||++.+.++.+..+.+
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 56777754 689999999999999888765
No 51
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=64.87 E-value=5.5 Score=31.82 Aligned_cols=29 Identities=17% Similarity=0.296 Sum_probs=24.1
Q ss_pred EEECCeEeeeecCCeeEEEccCCCCcccCHHHHHHH
Q 018226 276 VMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 311 (359)
Q Consensus 276 i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 311 (359)
..||++.+ .+++|||++.+.++.+.++++
T Consensus 29 ~~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 35677755 689999999999999988876
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=55.91 E-value=11 Score=31.87 Aligned_cols=28 Identities=25% Similarity=0.277 Sum_probs=24.5
Q ss_pred EEEEEEecCCCceEEEEeeCCCCCeeeeCC
Q 018226 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSS 119 (359)
Q Consensus 90 y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 119 (359)
-.+.|.|| +|.+.+++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 57789999 79999999999999998643
No 53
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=53.69 E-value=14 Score=28.45 Aligned_cols=24 Identities=13% Similarity=0.209 Sum_probs=20.7
Q ss_pred ecCCCceEEEEeeCCCCCeeeeCCCC
Q 018226 96 IGTPPQNFTVIFDTGSSNLWVPSSKC 121 (359)
Q Consensus 96 iGtP~q~~~v~~DTGSs~~wv~~~~C 121 (359)
|| +|.+.+++|||-+++-+.....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 66 6899999999999999986655
No 54
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=51.82 E-value=19 Score=32.39 Aligned_cols=44 Identities=25% Similarity=0.206 Sum_probs=32.0
Q ss_pred eeceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHH
Q 018226 255 KGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTII 308 (359)
Q Consensus 255 ~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 308 (359)
.|.+...|+.....|.++ |.||.+. ..++||||++.+++|..-+
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGTT-------LNLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTEE-------EEEEEETTCCCEEECBTTS
T ss_pred CCceeeeecCCCCEEEEE---EEECCEE-------EEEEEeCCCcceEEecCCC
Confidence 356666777666777654 6788433 4799999999999997544
No 55
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=50.16 E-value=20 Score=32.22 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=31.7
Q ss_pred eceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHH
Q 018226 256 GEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTII 308 (359)
Q Consensus 256 g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 308 (359)
|.+...|+.....|.++ |.||.+. ..+++|||++.+++|...+
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKST-------LHLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEE-------EEEEEETTCCCEEEECTTS
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEE-------EEEEEeCCCccceEeeCCC
Confidence 55666777767777654 6778333 4799999999999997544
No 56
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=48.91 E-value=22 Score=31.94 Aligned_cols=44 Identities=16% Similarity=0.107 Sum_probs=31.6
Q ss_pred eceEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHH
Q 018226 256 GEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIIT 309 (359)
Q Consensus 256 g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~ 309 (359)
|.+...|+.....|.++ |.||.+ ...++||||++.+++|..-+.
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q-------~~~v~~DTGSs~lWv~~~~C~ 47 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDD-------TLGLDFDTGSADLWVFSSQTP 47 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTE-------EEEEEEETTCCCEEECBTTSC
T ss_pred CceeeeEcCCCCEEEEE---EEECCE-------EEEEEEcCCCcceEEecCCCC
Confidence 55666677666677654 678833 347999999999999976543
No 57
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=37.31 E-value=47 Score=29.75 Aligned_cols=45 Identities=20% Similarity=0.007 Sum_probs=30.4
Q ss_pred eceEEE-ecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHH
Q 018226 256 GEHTYV-PVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTII 308 (359)
Q Consensus 256 g~l~~~-p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 308 (359)
|.+.-. |......|.+ .|.||.- .+...++||||++.+++|..-+
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~~C 48 (329)
T 1oew_A 3 GSATTTPIDSLDDAYIT---PVQIGTP-----AQTLNLDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTT-----TEEEEEEEETTCCCEEECBTTS
T ss_pred ceeEeeecCCCCCEEEE---EEEECCC-----CeEEEEEECCCCCCeEEecCCC
Confidence 444555 5556666765 4678832 2345799999999999997543
No 58
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=34.64 E-value=55 Score=29.28 Aligned_cols=46 Identities=17% Similarity=0.004 Sum_probs=30.6
Q ss_pred eceEEE-ecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHHH
Q 018226 256 GEHTYV-PVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIIT 309 (359)
Q Consensus 256 g~l~~~-p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~ 309 (359)
|.+.-. |......|.+ .|.||.. .+...++||||++.+++|..-+.
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~~C~ 49 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYIT---SVSIGTP-----AQVLPLDFDTGSSDLWVFSSETP 49 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTT-----TEEEEEEEETTCCCEEECBTTSC
T ss_pred cceeeecCCCCCCEEEE---EEEECCC-----CeEEEEEEcCCCCCeEEecCCCC
Confidence 444555 5555566754 4678832 23457999999999999976443
No 59
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=33.01 E-value=59 Score=27.61 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=26.9
Q ss_pred eEeeeecCCceEEEE---EEecCC-----CceEEEEeeCCCCCeeeeCC
Q 018226 79 IVALKNYMDAQYFGE---IGIGTP-----PQNFTVIFDTGSSNLWVPSS 119 (359)
Q Consensus 79 ~~~l~n~~~~~y~~~---i~iGtP-----~q~~~v~~DTGSs~~wv~~~ 119 (359)
.+|+.+. ..|.++ |.||.- .....+++|||++.+++|..
T Consensus 181 ~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTYQ--YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEEE--TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEcccC--CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 3566653 345554 778852 34578999999999999853
No 60
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=32.71 E-value=38 Score=30.81 Aligned_cols=45 Identities=16% Similarity=0.056 Sum_probs=29.9
Q ss_pred eeceEEEecCC--CCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHH
Q 018226 255 KGEHTYVPVTQ--KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (359)
Q Consensus 255 ~g~l~~~p~~~--~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 307 (359)
+|.....|+.. ...|.+ .|.||.. .+...++||||++.+++|...
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~~ 50 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTP-----GQDFYLLFDTGSSDTWVPHKG 50 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTT-----TEEEEEEEETTCCCCEEEBTT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCC-----CcEEEEEEcCCCCCeEECCCC
Confidence 35566677754 456654 4677732 233579999999999998653
No 61
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=30.48 E-value=47 Score=27.88 Aligned_cols=29 Identities=24% Similarity=0.276 Sum_probs=24.8
Q ss_pred EEEEEEecCCCceEEEEeeCCCCCeeeeCCC
Q 018226 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK 120 (359)
Q Consensus 90 y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~ 120 (359)
-.+++.|| +|.+.+++|||.+++-+...+
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~~ 141 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEELN 141 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeeccc
Confidence 46789999 699999999999999986444
No 62
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=29.68 E-value=56 Score=30.23 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=27.9
Q ss_pred ceeEeeeecCCceEEEE---EEecCCCceE----------------EEEeeCCCCCeeeeCC
Q 018226 77 ADIVALKNYMDAQYFGE---IGIGTPPQNF----------------TVIFDTGSSNLWVPSS 119 (359)
Q Consensus 77 ~~~~~l~n~~~~~y~~~---i~iGtP~q~~----------------~v~~DTGSs~~wv~~~ 119 (359)
-..+|+.......|.++ |+||. +.+ .+++|||++.+.+|..
T Consensus 217 l~~~Pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 217 LAFTPLTITLQGEYNVRVNSIRINQ--HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp EEEEECEECTTSCEEECEEEEEETT--EEEECC------------CCEEECSSCSSEEECHH
T ss_pred eeecccccCCCCcceEEEEEEEECC--EEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 34578876533456664 67884 333 1899999999999854
No 63
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=29.39 E-value=83 Score=26.47 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=26.9
Q ss_pred eEeeeecCCceEEE---EEEecCC----CceEEEEeeCCCCCeeeeCCC
Q 018226 79 IVALKNYMDAQYFG---EIGIGTP----PQNFTVIFDTGSSNLWVPSSK 120 (359)
Q Consensus 79 ~~~l~n~~~~~y~~---~i~iGtP----~q~~~v~~DTGSs~~wv~~~~ 120 (359)
.+|+.+. ..|.+ .|+||.- .....+++|||++.+++|...
T Consensus 92 ~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 92 YLNVTRK--AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp EEECSSB--TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHH
T ss_pred EEECccc--cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHH
Confidence 3566543 33444 5778852 245789999999999998643
No 64
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=27.36 E-value=62 Score=28.87 Aligned_cols=43 Identities=16% Similarity=-0.021 Sum_probs=27.4
Q ss_pred eEEEecCCCCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHHH
Q 018226 258 HTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTII 308 (359)
Q Consensus 258 l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 308 (359)
+.-.+......|.+ .|.||.. .+...+++|||++.+++|..-+
T Consensus 6 v~~~~~~~~~~Y~~---~i~iGTP-----~q~~~v~~DTGSs~lWv~~~~c 48 (325)
T 2apr_A 6 VPMTDYGNDIEYYG---QVTIGTP-----GKKFNLDFDTGSSDLWIASTLC 48 (325)
T ss_dssp EEEEEETTTTEEEE---EEEETTT-----TEEEEEEEETTCCCCEEEBTTC
T ss_pred eeeeecCCCCEEEE---EEEECCC-----CeEEEEEEcCCCCCEEEccCCC
Confidence 33334444556654 4677732 2345799999999999986543
No 65
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=26.00 E-value=25 Score=31.47 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=27.6
Q ss_pred ceEEEecCC--CCceEEEEceEEECCeEeeeecCCeeEEEccCCCCcccCHHH
Q 018226 257 EHTYVPVTQ--KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (359)
Q Consensus 257 ~l~~~p~~~--~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 307 (359)
+....|+.. ...|.+ .|.||.. .+...+++|||++.+++|...
T Consensus 2 ~~~~~~l~n~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~~ 46 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFG---KIYLGTP-----PQEFTVLFDTGSSDFWVPSIY 46 (323)
T ss_dssp CCEEEEEEEETTTEEEE---EEEETTT-----TEEEEEEEETTCCCEEEEBTT
T ss_pred CcceeeeEeccCCEEEE---EEEECCC-----CeEEEEEEeCCccceEEcCCC
Confidence 334455543 345554 4677742 234579999999999999653
No 66
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=22.96 E-value=1e+02 Score=28.16 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=25.9
Q ss_pred eEeeeecCCceEEEE--EEecCCC-ceEEEEeeCCCCCeeeeCCC
Q 018226 79 IVALKNYMDAQYFGE--IGIGTPP-QNFTVIFDTGSSNLWVPSSK 120 (359)
Q Consensus 79 ~~~l~n~~~~~y~~~--i~iGtP~-q~~~v~~DTGSs~~wv~~~~ 120 (359)
.+|+.+.. .|.++ |+||.-. ....+++|||++.+++|...
T Consensus 232 ~~p~~~~~--~w~v~l~i~v~g~~~~~~~aiiDSGTs~~~lP~~~ 274 (375)
T 1miq_A 232 YEKLNHDL--YWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSEF 274 (375)
T ss_dssp EEEBSSSS--SSEEEEEEEETTEEEEEEEEEECTTBSSEEECHHH
T ss_pred EEecCCCc--eEEEEEEEEECCEEcccceEEecCCCccEEcCHHH
Confidence 35665432 33333 7788411 24679999999999998653
No 67
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=22.67 E-value=81 Score=29.84 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=27.7
Q ss_pred eEeeeecCCceEEEEEEecCC-CceEEEEeeCCCCCeeeeCCCC
Q 018226 79 IVALKNYMDAQYFGEIGIGTP-PQNFTVIFDTGSSNLWVPSSKC 121 (359)
Q Consensus 79 ~~~l~n~~~~~y~~~i~iGtP-~q~~~v~~DTGSs~~wv~~~~C 121 (359)
.+|+.+........+|+||.- .....+++|||++.+++|...+
T Consensus 307 ~~pv~~~~~w~v~l~I~Vgg~~~~~~~aiiDSGTt~i~lP~~~~ 350 (451)
T 3qvc_A 307 YEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFF 350 (451)
T ss_dssp EEECSSTTSSEEEEEEEETTEEEEEEEEEECTTBSSEEECHHHH
T ss_pred EEEcccCCeeEEEEEEEECCccCCCceEEEeCCCccccCCHHHH
Confidence 356665333323333677742 2467799999999999986543
No 68
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=22.19 E-value=1.2e+02 Score=27.80 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=27.6
Q ss_pred eEeeeecCCceEEE---EEEecCC----CceEEEEeeCCCCCeeeeCCC
Q 018226 79 IVALKNYMDAQYFG---EIGIGTP----PQNFTVIFDTGSSNLWVPSSK 120 (359)
Q Consensus 79 ~~~l~n~~~~~y~~---~i~iGtP----~q~~~v~~DTGSs~~wv~~~~ 120 (359)
.+|+... ..|.+ .|+||.- .....+++|||++.+++|...
T Consensus 235 ~~pv~~~--~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~ 281 (383)
T 2x0b_A 235 YINLIKT--GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSS 281 (383)
T ss_dssp EEEBSST--TSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHHH
T ss_pred EEEcCCC--ceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHHH
Confidence 3566553 33444 5788862 245789999999999998543
No 69
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=20.18 E-value=1.4e+02 Score=26.49 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=27.1
Q ss_pred eeEeeeecC--CceEE--EEEEecCCCce----EEEEeeCCCCCeeeeCCC
Q 018226 78 DIVALKNYM--DAQYF--GEIGIGTPPQN----FTVIFDTGSSNLWVPSSK 120 (359)
Q Consensus 78 ~~~~l~n~~--~~~y~--~~i~iGtP~q~----~~v~~DTGSs~~wv~~~~ 120 (359)
..+|+.... ...|. ..|+||. .+. ..+++|||++.+++|...
T Consensus 175 ~~~p~~~~~~~~~~w~v~~~i~v~~-~~~l~~~~~aiiDSGTt~~~lP~~~ 224 (340)
T 1wkr_A 175 TYTPITSTSPASAYWGINQSIRYGS-STSILSSTAGIVDTGTTLTLIASDA 224 (340)
T ss_dssp EEEECCSSTTGGGSSEEEEEEEETT-TEEEEEEEEEEECTTBCSEEECHHH
T ss_pred EEEECccCCCCcceEEEEeeEEECC-CeEccCCCeEEEeCCcccccCCHHH
Confidence 456776521 12232 4688885 233 379999999999998643
Done!