BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018229
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SW96|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1 OS=Arabidopsis thaliana
GN=SYNC1 PE=2 SV=1
Length = 572
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/363 (68%), Positives = 308/363 (84%), Gaps = 5/363 (1%)
Query: 1 MADNELP-VDQVATMDLNDDA--VQRHQFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVK 57
MAD +P Q+A + L +D VQR QFS+RVLI++IL RPDGGAGLAG+ VR+GGWVK
Sbjct: 1 MADEIVPPATQLAAVSLENDGSTVQRAQFSNRVLIRTILDRPDGGAGLAGQTVRIGGWVK 60
Query: 58 TGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVPTGTCVYVEGMLKNPPEG--T 115
+GR+QGK +F+FL VNDGSCPANLQV+VD + D+ LV TGTCV V+G+LK PP+G T
Sbjct: 61 SGRDQGKRTFSFLAVNDGSCPANLQVMVDPSLYDVSNLVATGTCVTVDGVLKVPPKGKGT 120
Query: 116 KQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYA 175
+Q+IEL V KV+DVG VD +KYP+PKTKLTLE LRD + R RTN+I+AVARIRNALA+A
Sbjct: 121 QQQIELNVVKVIDVGTVDASKYPLPKTKLTLETLRDVLHLRSRTNSISAVARIRNALAFA 180
Query: 176 THTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPPPSEADIEAA 235
TH+F Q+ FLYIHTPIITTSDCEGAGEMFQ TTLI+ ++LE++LI NPPP+EAD+EAA
Sbjct: 181 THSFFQEHSFLYIHTPIITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAA 240
Query: 236 KLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDY 295
+L++ E+G VA+LK+ KA +EAI+A+V EL AKE A ++ERS+L+PG+P+KDG IDY
Sbjct: 241 RLIVIERGNVVAELKAAKASKEAITAAVAELKIAKETFAHIDERSRLRPGLPKKDGNIDY 300
Query: 296 TQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFS 355
++DFF RQAFLTVSGQLQVETYACA+SNVYTFGPTFRAE+SHTSRHLAEFWMVEPE+AF+
Sbjct: 301 SKDFFGRQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFA 360
Query: 356 DLK 358
DL+
Sbjct: 361 DLE 363
>sp|Q9SSK1|SYNC3_ARATH Asparagine--tRNA ligase, cytoplasmic 3 OS=Arabidopsis thaliana
GN=SYNC3 PE=3 SV=1
Length = 571
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/355 (69%), Positives = 301/355 (84%), Gaps = 7/355 (1%)
Query: 7 PVDQVATMDLNDDA--VQRHQFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGK 64
P +Q+A +L +D VQ+ QFSDRVLI+SIL GGA LAG++VR+GGWVKTGR+QGK
Sbjct: 8 PANQLAADNLENDGSTVQKAQFSDRVLIRSIL---GGGAKLAGQKVRIGGWVKTGRQQGK 64
Query: 65 GSFAFLEVNDGSCPANLQVIVDKDVADLGQLVPTGTCVYVEGMLKNPPEGT--KQKIELR 122
G+FAFLEVNDGSCPANLQV+VD + DL +LV TGTCV V+G+LK PPEG KQ IEL
Sbjct: 65 GTFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTCVTVDGVLKIPPEGKGLKQSIELS 124
Query: 123 VQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQK 182
V+ V+ VG VDP YP+PKTKLT EFLRD + R RTN I+AVARIRNALA+ATH+F Q+
Sbjct: 125 VETVIAVGTVDPTTYPLPKTKLTPEFLRDVLHLRSRTNLISAVARIRNALAFATHSFFQE 184
Query: 183 QGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPPPSEADIEAAKLVIKEK 242
FLYIHTPIITTSDCEGAGEMFQVTTLI+ +++E++LI NPPP+EAD+EAA+L++KE+
Sbjct: 185 HSFLYIHTPIITTSDCEGAGEMFQVTTLINHTERVEQDLIDNPPPTEADVEAARLIVKER 244
Query: 243 GEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFAR 302
GEAVA+LK KA +E I+ASV +L+ AK +LA +EER +LKPG+P+ DGKIDY+ DFF R
Sbjct: 245 GEAVAQLKVAKASKEEITASVAQLSVAKASLAHVEERLRLKPGLPKNDGKIDYSNDFFGR 304
Query: 303 QAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDL 357
QAFLTVSGQLQVETYACA+S+VYTFGPTFRAE+SHTSRHLAEFWMVEPE+AF+D+
Sbjct: 305 QAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADI 359
>sp|Q9SW95|SYNC2_ARATH Asparagine--tRNA ligase, cytoplasmic 2 OS=Arabidopsis thaliana
GN=SYNC2 PE=2 SV=2
Length = 638
Score = 244 bits (622), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 186/297 (62%), Gaps = 12/297 (4%)
Query: 67 FAFLEVNDGSCPANLQVIVDKDVADL--GQLVPTGTCVYVEGMLKNPPEGT-KQKIELRV 123
F FL ++DGS ++LQV+VD ++ + QL+ GTC+ EG+L+ P + K IEL
Sbjct: 140 FYFL-ISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHVIELEA 198
Query: 124 QKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQ 183
+K++ VG VDP KYP+ K +L L LRD FRPRT T+ +V R+ +AL A+HTFLQ
Sbjct: 199 EKLLHVGTVDPEKYPLSKKQLPLHMLRDFSHFRPRTTTVGSVTRVHSALTLASHTFLQYH 258
Query: 184 GFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPPPSEAD---IEAAKLVIK 240
GF Y+ P+ITT+ G GEMF+VTTL+ D E+ K PP E D I+ K VIK
Sbjct: 259 GFQYVQVPVITTT--TGFGEMFRVTTLLGKTDDKEE---KKPPVQEKDGFSIDTVKAVIK 313
Query: 241 EKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFF 300
EK + LK + RE + A+V +L K + +++E + K K G K K+D+++DFF
Sbjct: 314 EKTRLIDHLKRSDSNRETVVAAVHDLKKTNDLASQIEMKQKSKTGTLVKPEKLDFSKDFF 373
Query: 301 ARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDL 357
R +LT SG+ +E+YA A+ VYTFGP F A+ +RHLAE W VE EMAF++L
Sbjct: 374 GRDTYLTASGRFHLESYASALGKVYTFGPRFIADKIDNARHLAEKWNVETEMAFAEL 430
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 15 DLNDDAVQRHQFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGS 66
DL+ + ++S RV +K++L R D GAGLAG++V +GGWVK+ R K S
Sbjct: 15 DLSPKPITLSKYSKRVELKTLLDRSDRGAGLAGKRVVIGGWVKSARAVKKNS 66
>sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=SYNO PE=2 SV=3
Length = 567
Score = 239 bits (610), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 184/337 (54%), Gaps = 68/337 (20%)
Query: 25 QFSDRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVI 84
+F ++ I + D G G+ + + GWV+T R Q S F+E+NDGSC +NLQ +
Sbjct: 87 EFRKKLRIAEVKGGADEGLSRVGQSLNIMGWVRTLRSQS--SVTFIEINDGSCLSNLQCV 144
Query: 85 VDKDVADLGQL----VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIP 140
+ D Q+ + TG V V+G + +GTKQK+EL+V+K++ VG D + YPI
Sbjct: 145 MTSDAEGYDQVESGSILTGASVSVQGTIV-ASQGTKQKVELKVEKIIVVGECD-SSYPIQ 202
Query: 141 KTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEG 200
K +++ EFLR + RPRTNT AVAR+RN LAYATH F Q+ GF+++ +PIIT SDCEG
Sbjct: 203 KKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEG 262
Query: 201 AGEMFQVTTLISDADKLEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAIS 260
AGE F VTTLI PS E
Sbjct: 263 AGEQFCVTTLI---------------PSS--------------------------HENTD 281
Query: 261 ASVTELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACA 320
S+ + K K L + KP LTVSGQL ETYA A
Sbjct: 282 TSIDAIPKTKGGLIDWSQDFFGKPAF-------------------LTVSGQLNGETYATA 322
Query: 321 VSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDL 357
+S+VYTFGPTFRAE+S+TSRHLAEFWM+EPE+AF+DL
Sbjct: 323 LSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADL 359
>sp|B3H198|SYN_ACTP7 Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
7 (strain AP76) GN=asnS PE=3 SV=1
Length = 467
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 167/316 (52%), Gaps = 78/316 (24%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G +V V GWV+T R K +FL V DGSC +Q I++ D+A+ V G V
Sbjct: 18 GEEVAVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQSIINNDLANYNDEVLRLTAGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL V VG V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPAEG--QAVELHATHVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNL 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ LA A H F +QGF ++ TP LI+ +D
Sbjct: 135 IGAVARVRHCLAQAIHRFFNEQGFYWVATP------------------LITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + EE
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRTEE--- 193
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
GK+D++QDFF +++FLTVSGQL ETYACA+S VYTFGPTFRAE+S+T+RH
Sbjct: 194 ---------GKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDL 357
LAEFWMVEPE AF+ L
Sbjct: 245 LAEFWMVEPEFAFATL 260
>sp|A3N039|SYN_ACTP2 Asparagine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
5b (strain L20) GN=asnS PE=3 SV=1
Length = 467
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 167/316 (52%), Gaps = 78/316 (24%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G +V V GWV+T R K +FL V DGSC +Q I++ D+A+ V G V
Sbjct: 18 GEEVAVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQSIINNDLANYNDEVLRLTAGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL V VG V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPAEG--QAVELHATHVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNL 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ LA A H F +QGF ++ TP LI+ +D
Sbjct: 135 IGAVARVRHCLAQAIHRFFNEQGFYWVATP------------------LITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + EE
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRTEE--- 193
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
GK+D++QDFF +++FLTVSGQL ETYACA+S VYTFGPTFRAE+S+T+RH
Sbjct: 194 ---------GKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDL 357
LAEFWMVEPE AF+ L
Sbjct: 245 LAEFWMVEPEFAFATL 260
>sp|Q7N622|SYN_PHOLL Asparagine--tRNA ligase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=asnS PE=3 SV=1
Length = 466
Score = 197 bits (502), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 161/314 (51%), Gaps = 76/314 (24%)
Query: 49 QVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVE 105
+V V GW++T R K +FL V DGSC LQ +V+ ++ + V TG V V
Sbjct: 19 EVTVRGWIRT-RRDSKAGISFLAVYDGSCFNPLQAVVNNNLPNYQDEVLHLTTGCSVEVT 77
Query: 106 GMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAA 164
G + G Q EL+ K+V +G+V DP YP+ + ++E+LR+ RPRTN I A
Sbjct: 78 GTVV-ASLGQGQNFELQATKIVVIGLVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGA 136
Query: 165 VARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKN 224
VAR+R+ LA A H F + G+ ++ TP+IT +D EGAGEMF+V+TL
Sbjct: 137 VARMRHTLAQALHRFFHENGYFWVSTPLITAADTEGAGEMFRVSTL-------------- 182
Query: 225 PPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKP 284
+ L + +KGE D GREA
Sbjct: 183 --------DLQNLPLTDKGE--VDFNQDFFGREA-------------------------- 206
Query: 285 GIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
FLTVSGQL E YACA+S VYTFGPTFRAE+S+TSRHLAE
Sbjct: 207 --------------------FLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAE 246
Query: 345 FWMVEPEMAFSDLK 358
FWM+EPE+AF++L
Sbjct: 247 FWMLEPEIAFANLN 260
>sp|Q7VLL7|SYN_HAEDU Asparagine--tRNA ligase OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=asnS PE=3 SV=1
Length = 467
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 165/320 (51%), Gaps = 76/320 (23%)
Query: 42 GAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PT 98
G + G +V V GWV+T R K +FL V DGSC +QVI++ D+A+ +
Sbjct: 13 GKIVVGEKVTVRGWVRT-RRDSKAGLSFLTVYDGSCFEPIQVIINNDLANYQTEILRLTA 71
Query: 99 GTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRP 157
G V V G + P + Q +EL+ +V VG VD P YP+ + ++E+LR+ RP
Sbjct: 72 GCSVIVTGNIVESP-ASGQAVELQALEVEVVGWVDDPDTYPMAAKRHSIEYLREVAHLRP 130
Query: 158 RTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKL 217
RTN I AVAR+R+ LA A H F QGF ++ T LI+ +D
Sbjct: 131 RTNLIGAVARVRHCLAQAIHRFFNGQGFYWV------------------ATPLITASD-- 170
Query: 218 EKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLE 277
++ AG E S +L ENL + E
Sbjct: 171 ---------------------------------TEGAG-EMFRVSTLDL----ENLPRTE 192
Query: 278 ERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSH 337
GKIDY+QDFF ++AFLTVSGQL E+YACA+S VYTFGPTFRAE+S+
Sbjct: 193 H------------GKIDYSQDFFGKEAFLTVSGQLNGESYACALSKVYTFGPTFRAENSN 240
Query: 338 TSRHLAEFWMVEPEMAFSDL 357
T+RHLAEFWMVEPE AF+ L
Sbjct: 241 TTRHLAEFWMVEPEFAFATL 260
>sp|Q662R1|SYN_BORGA Asparagine--tRNA ligase OS=Borrelia garinii (strain PBi) GN=asnS
PE=3 SV=1
Length = 462
Score = 191 bits (485), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 167/332 (50%), Gaps = 87/332 (26%)
Query: 32 IKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV-- 89
IK IL P + V + GW++T R GK F+E+NDGS +Q +++++
Sbjct: 5 IKDILENP-----ILNSNVTINGWIRTKRSNGK--IGFIEINDGSTLKGIQAVINEEENQ 57
Query: 90 ---ADLGQLVPTGTCVYVEGML-KNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
DL +L TG + + G+L ++P +G Q E+++ +G D YP+ K + T
Sbjct: 58 FTEKDLKKLT-TGASISLTGLLVESPAKG--QNYEIKIYSFNVIGEADSKTYPLQKKRHT 114
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
EFLR+ R RTNT A+AR+RN ++Y H + QK GF YI+TPIIT++D EGAGEMF
Sbjct: 115 FEFLREIPHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF 174
Query: 206 QVTTLISDADKLEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTE 265
+V+TL K K P S ++I+ K D G+EA SVT
Sbjct: 175 RVSTL-----KFNK-----PNNSLSNID---------------FKDDFFGKEAF-LSVT- 207
Query: 266 LTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVY 325
GQL E YA A+S +Y
Sbjct: 208 --------------------------------------------GQLHGEAYAMALSKIY 223
Query: 326 TFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDL 357
TFGPTFRAE+S+T+RH +EFWM+EPEMAF L
Sbjct: 224 TFGPTFRAENSNTTRHASEFWMIEPEMAFYKL 255
>sp|P43829|SYN_HAEIN Asparagine--tRNA ligase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=asnS PE=3 SV=2
Length = 467
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 166/316 (52%), Gaps = 78/316 (24%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G V V GWV+T R K +FL V DGSC +Q I++ D+ + + TG V
Sbjct: 18 GETVTVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL+ +KV G V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPAEG--QAVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLRPRTNI 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ L+ A H F +Q G + T LI+ +D
Sbjct: 135 IGAVARVRHCLSQAIHRFFHEQ------------------GFYWVATPLITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + E
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRSE---- 192
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
+GK+D++QDFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+T+RH
Sbjct: 193 --------NGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDL 357
LAEFWMVEPE+AF+ L
Sbjct: 245 LAEFWMVEPEVAFATL 260
>sp|A5UF16|SYN_HAEIG Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittGG)
GN=asnS PE=3 SV=1
Length = 467
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 166/316 (52%), Gaps = 78/316 (24%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G V V GWV+T R K +FL V DGSC +Q I++ D+ + + TG V
Sbjct: 18 GETVTVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL+ +KV G V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPAEG--QAVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLRPRTNI 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ L+ A H F +Q G + T LI+ +D
Sbjct: 135 IGAVARVRHCLSQAIHRFFHEQ------------------GFYWVATPLITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + E
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRSE---- 192
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
+GK+D++QDFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+T+RH
Sbjct: 193 --------NGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDL 357
LAEFWMVEPE+AF+ L
Sbjct: 245 LAEFWMVEPEVAFATL 260
>sp|Q6D453|SYN_ERWCT Asparagine--tRNA ligase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=asnS PE=3 SV=1
Length = 466
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 159/313 (50%), Gaps = 76/313 (24%)
Query: 49 QVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVE 105
+V V GWV+T R K +F+ V DGSC LQ +V+ ++++ V TG V +
Sbjct: 19 EVTVRGWVRT-RRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTTGCSVEIT 77
Query: 106 GMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRPRTNTIAA 164
G + P G Q EL+ V VG VD P YP+ + ++E+LR+ RPRTN I A
Sbjct: 78 GNVVASP-GEGQSFELQATNVNVVGWVDDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGA 136
Query: 165 VARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKN 224
VAR+R+ LA A H F + G+ + +
Sbjct: 137 VARVRHTLAQAIHRFFHENGYFW----------------------------------VST 162
Query: 225 PPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLKP 284
P + +D E A E S ++ ENL + E+
Sbjct: 163 PLITASDTEGAG--------------------EMFRVSTLDM----ENLPRTEQ------ 192
Query: 285 GIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
GK+D+++DFF ++AFLTVSGQL ETYACA+SNVYTFGPTFRAE+S+T+RHLAE
Sbjct: 193 ------GKVDFSKDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAENSNTARHLAE 246
Query: 345 FWMVEPEMAFSDL 357
FWM+EPE+AF+ L
Sbjct: 247 FWMIEPEVAFASL 259
>sp|A5UCB9|SYN_HAEIE Asparagine--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=asnS PE=3 SV=1
Length = 467
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 166/316 (52%), Gaps = 78/316 (24%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G V V GWV+T R K +FL V DGSC +Q I++ D+ + + TG V
Sbjct: 18 GETVTVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76
Query: 104 VEG-MLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G ++++P EG Q +EL+ +KV G V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGKVVESPSEG--QAVELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLRPRTNI 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AV+R+R+ L+ A H F +Q G + T LI+ +D
Sbjct: 135 IGAVSRVRHCLSQAIHRFFHEQ------------------GFYWVATPLITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + E
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRSE---- 192
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
+GK+D++QDFF +++FLTVSGQL ETYACA+S +YTFGPTFRAE+S+T+RH
Sbjct: 193 --------NGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDL 357
LAEFWMVEPE+AF+ L
Sbjct: 245 LAEFWMVEPEVAFATL 260
>sp|Q73P19|SYN_TREDE Asparagine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=asnS PE=3 SV=1
Length = 473
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 166/335 (49%), Gaps = 78/335 (23%)
Query: 31 LIKSILT-RPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV 89
LIK ILT P G A + V GWV+T RE + F+E+NDGSC A++Q D+D
Sbjct: 4 LIKDILTSEPKGQA------IDVYGWVRTKRETK--NLVFIEINDGSCFASIQATFDRDT 55
Query: 90 A------DLGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTK 143
L + TG V V G L P Q++EL+ + G D KYP+ K +
Sbjct: 56 GLDNNTEALLKKAGTGVSVKVSGNLV-PSPAAGQRVELQANNIHIFGDADQEKYPLQKKR 114
Query: 144 LTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGE 203
++EFLRD R RTNT AVARIR+ +AYA IHT
Sbjct: 115 HSMEFLRDIAHLRARTNTFGAVARIRSQMAYA------------IHT------------- 149
Query: 204 MFQVTTLISDADKLEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASV 263
FQ + + P + +D E A GE D I +V
Sbjct: 150 FFQERGF---------QYVHTPIITGSDCEGA-------GEMFHVTTFD------IEETV 187
Query: 264 TELTKAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSN 323
+ K K++ KIDY+QDFF +QA LTVSGQL+ ETYA A+S
Sbjct: 188 KKALKEKKDPDSF---------------KIDYSQDFFGKQANLTVSGQLEGETYATALSR 232
Query: 324 VYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
+YTFGPTFRAE+S+TSRHLAEFWMVEPEM+F +K
Sbjct: 233 IYTFGPTFRAENSNTSRHLAEFWMVEPEMSFFTIK 267
>sp|A4W8U9|SYN_ENT38 Asparagine--tRNA ligase OS=Enterobacter sp. (strain 638) GN=asnS
PE=3 SV=1
Length = 466
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 160/315 (50%), Gaps = 76/315 (24%)
Query: 48 RQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYV 104
++V V GWV+T R K +FL V DGSC +Q +++ + + V TG V V
Sbjct: 18 QEVTVRGWVRT-RRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNDDVLHLTTGCSVIV 76
Query: 105 EGMLKNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIA 163
G++ P G Q EL+ + G V DP YP+ + ++E+LR+ RPRTN I
Sbjct: 77 TGVVVASP-GQGQSFELQATAIEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNMIG 135
Query: 164 AVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIK 223
AVAR+R+ LA A H F +QG+ F V+T
Sbjct: 136 AVARVRHTLAQALHRFFDEQGY-------------------FWVST-------------- 162
Query: 224 NPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSKLK 283
P + +D E A E S +L ENL
Sbjct: 163 -PLITASDTEGAG--------------------EMFRVSTLDL----ENL---------- 187
Query: 284 PGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLA 343
P P+ GK+D+ +DFF ++AFLTVSGQL ETYACA+S +YTFGPTFRAE+S+TSRHLA
Sbjct: 188 PRTPE--GKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLA 245
Query: 344 EFWMVEPEMAFSDLK 358
EFWM+EPE+AF++L
Sbjct: 246 EFWMLEPEVAFANLN 260
>sp|A9NE58|SYN_ACHLI Asparagine--tRNA ligase OS=Acholeplasma laidlawii (strain PG-8A)
GN=asnS PE=3 SV=1
Length = 463
Score = 177 bits (450), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 169/331 (51%), Gaps = 82/331 (24%)
Query: 32 IKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVA- 90
I++I P A AG++V + GW++ R+Q + F F+ +NDGS N+QV+ ++
Sbjct: 5 IRTIYKDP---ARYAGQEVILKGWIRNHRDQKE--FGFINLNDGSFFENIQVVYERATTK 59
Query: 91 --DLGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAK-YPIPKTKLTLE 147
D + G + V G L P+ + Q E++ +V +G D + YPI + T E
Sbjct: 60 DFDAVTRLSVGASIEVIGTLVLTPDRS-QPFEIKALEVRLIG--DSGENYPIQPKRHTRE 116
Query: 148 FLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQV 207
FLR+ RPRTN +AV R+R+ AYA H F Q+Q F+Y+HTPI+T +D EGAG MF+V
Sbjct: 117 FLREVAHLRPRTNLFSAVFRVRSIAAYAIHKFFQEQDFVYVHTPILTANDGEGAGAMFKV 176
Query: 208 TTLISDADKLEKELIKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELT 267
TTL ++ K P ++ I+ +K D GREA
Sbjct: 177 TTL---------DMNKPPRNEDSSIDYSK---------------DFFGREA--------- 203
Query: 268 KAKENLAKLEERSKLKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTF 327
NL TV+GQL+ E YA A N+YTF
Sbjct: 204 ----NL---------------------------------TVTGQLEGEAYAHAFRNIYTF 226
Query: 328 GPTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
GPTFRAE+S+T+ H +EFWM+EPE+AF+DL
Sbjct: 227 GPTFRAENSNTTTHASEFWMIEPEIAFADLN 257
>sp|Q2NU85|SYN_SODGM Asparagine--tRNA ligase OS=Sodalis glossinidius (strain morsitans)
GN=asnS PE=3 SV=1
Length = 466
Score = 177 bits (450), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 160/316 (50%), Gaps = 76/316 (24%)
Query: 46 AGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCV 102
A ++ V GWV+T R K +FL V DGSC LQ +++ + + + +G V
Sbjct: 16 ADSEITVQGWVRT-RRDSKAGISFLAVYDGSCFDPLQAVINNTLPNYQNDILRLTSGCSV 74
Query: 103 YVEGMLKNPPEGTKQKIELRVQKVVDVGMVD-PAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G + G Q+ E++ Q + +G VD P YP+ + ++E+LR+ RPRTN
Sbjct: 75 SVTGRVVESL-GGGQRYEIQAQAIEVLGWVDDPDTYPMAAKRHSVEYLREVAHLRPRTNL 133
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I AVAR+R+ LA A H F+ +QGF F V+T
Sbjct: 134 IGAVARVRHTLAQAIHRFMDEQGF-------------------FWVST------------ 162
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
P + +D E A E S +L ENL
Sbjct: 163 ---PLITASDTEGAG--------------------EMFRVSTLDL----ENL-------- 187
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
P P DGK++Y +DFF ++AFLTVSGQL E+YACA+S +YTFGPTFRAE+S+TSRH
Sbjct: 188 --PRTP--DGKVNYDEDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRH 243
Query: 342 LAEFWMVEPEMAFSDL 357
LAEFWM EPE+AF+ L
Sbjct: 244 LAEFWMAEPEVAFATL 259
>sp|A0LL53|SYN_SYNFM Asparagine--tRNA ligase OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=asnS PE=3 SV=1
Length = 466
Score = 174 bits (441), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL---VPTGTCVY 103
G+ VR GWV+T R+ K +F+E+NDGSC NLQV+ D+ + QL + TG V
Sbjct: 19 GKTVRAQGWVRTKRDS-KAGVSFIELNDGSCLRNLQVVADQGHPEYRQLLESITTGCAVM 77
Query: 104 VEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIA 163
VEG + P G Q IEL+ ++ G DPA YP+ K + + EFLR RPRTNTI
Sbjct: 78 VEGSIAYSP-GKGQTIELKADRITLYGTADPAVYPLQKKRHSFEFLRQIGHLRPRTNTIG 136
Query: 164 AVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
AV+R+RN L+YA H F Q +GF YIHTPIIT SDCEGAGEMF+VTTL
Sbjct: 137 AVSRVRNRLSYAIHQFFQDRGFYYIHTPIITASDCEGAGEMFRVTTL 183
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 54/64 (84%)
Query: 295 YTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAF 354
Y DFF + AFLTVSGQLQ E YA A+ VYTFGPTFRAE+S+TSRHLAEFWMVEPEMAF
Sbjct: 197 YRADFFGKPAFLTVSGQLQAEIYALALGRVYTFGPTFRAENSNTSRHLAEFWMVEPEMAF 256
Query: 355 SDLK 358
DL+
Sbjct: 257 CDLE 260
>sp|Q6MEC9|SYN_PARUW Asparagine--tRNA ligase OS=Protochlamydia amoebophila (strain
UWE25) GN=asnS PE=3 SV=1
Length = 467
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 118/186 (63%), Gaps = 8/186 (4%)
Query: 29 RVLIKSIL-TRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
R IKS+ T P+ A L G + + GWV+T R Q +F F+E+NDGS +N Q+I
Sbjct: 2 RTKIKSLRGTTPEVRA-LIGHDITLKGWVRTVRNQK--TFTFIEINDGSTLSNFQIIATP 58
Query: 88 DVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKL 144
D+A QL+ TG V G + P G +Q +E++ + +G DP Y + K +
Sbjct: 59 DIAGYDQLINQLSTGVSVSAIGTIVESP-GKEQNLEMQATAITIIGKCDPEVYLLQKKRH 117
Query: 145 TLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEM 204
T EFLR RPRTNTI AV R+RNALA+ATH F QK+GFLYIHTPIIT SDCEGAG+M
Sbjct: 118 TFEFLRSIAHLRPRTNTIGAVTRVRNALAFATHQFFQKRGFLYIHTPIITGSDCEGAGKM 177
Query: 205 FQVTTL 210
FQVTTL
Sbjct: 178 FQVTTL 183
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 271 ENLAKLEERSKLKPGIPQK--DGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFG 328
E K+ + + L P + +G++DYTQDFF + +LTVSGQL E YACA+S+VYTFG
Sbjct: 172 EGAGKMFQVTTLDQNNPARTPEGRVDYTQDFFGKPTYLTVSGQLNGEIYACALSDVYTFG 231
Query: 329 PTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
PTFRAE+S+TSRHLAEFWM+EPEMAF+DL
Sbjct: 232 PTFRAENSNTSRHLAEFWMIEPEMAFADLN 261
>sp|Q6ANL4|SYN_DESPS Asparagine--tRNA ligase OS=Desulfotalea psychrophila (strain LSv54
/ DSM 12343) GN=asnS PE=3 SV=1
Length = 449
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 50 VRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEG 106
V V GW++T R+ G F+FLEVNDGS N+QVI DK + + + V TG V VEG
Sbjct: 18 VTVAGWIRTRRD--TGDFSFLEVNDGSTLINMQVIADKSLGNYEEEVKKLSTGCSVMVEG 75
Query: 107 MLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVA 166
+LK P Q +E+ V VG DP YP+ K + +LEFLR+ RPRTN I+AVA
Sbjct: 76 VLKESP-AKGQSVEVHASSVTVVGWADPETYPLQKKRHSLEFLREISHLRPRTNAISAVA 134
Query: 167 RIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQV 207
R+R+ L+YA H F Q++GF +HTPIITTSDCEGAGEMFQV
Sbjct: 135 RVRSRLSYAVHNFFQEKGFTQVHTPIITTSDCEGAGEMFQV 175
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%)
Query: 299 FFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
FF A LTVSGQLQ E YA A+ +VYTFGPTFRAE+S+TSRHLAEFWM+EPEMAF DL+
Sbjct: 184 FFGAPAGLTVSGQLQAEVYATALGDVYTFGPTFRAENSNTSRHLAEFWMIEPEMAFCDLQ 243
>sp|B8F3Y5|SYN_HAEPS Asparagine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=asnS PE=3 SV=1
Length = 467
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 159/316 (50%), Gaps = 78/316 (24%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVY 103
G +V V GWV+T R K +FL V DGSC +Q I++ D+++ V G V
Sbjct: 18 GEEVAVRGWVRT-RRDSKAGLSFLAVYDGSCFDPIQAIINNDLSNYQDEVLRLTAGCSVI 76
Query: 104 VEGML-KNPPEGTKQKIELRVQKVVDVGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNT 161
V G++ ++P EG Q +EL+ + V VG V DP YP+ + ++E+LR+ RPRTN
Sbjct: 77 VTGVIVESPAEG--QAVELQAKSVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNL 134
Query: 162 IAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKEL 221
I A+A H Q IH G + T LI+ +D
Sbjct: 135 IG-------AVARVRHCLAQA-----IHRFF------HEQGFYWVATPLITASD------ 170
Query: 222 IKNPPPSEADIEAAKLVIKEKGEAVAKLKSDKAGREAISASVTELTKAKENLAKLEERSK 281
++ AG E S +L ENL + E
Sbjct: 171 -----------------------------TEGAG-EMFRVSTLDL----ENLPRGE---- 192
Query: 282 LKPGIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRH 341
DGK+D++QDFF R++FLTVSGQL ETYACA+S VYTFGPTFRAE+S+T+RH
Sbjct: 193 --------DGKVDFSQDFFGRESFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTTRH 244
Query: 342 LAEFWMVEPEMAFSDL 357
LAEFWMVEPE AF+ L
Sbjct: 245 LAEFWMVEPEFAFATL 260
>sp|P52276|SYN_SYNY3 Asparagine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=asnS PE=3 SV=2
Length = 462
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 113/170 (66%), Gaps = 6/170 (3%)
Query: 44 GLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP---TGT 100
G A QV V GW++T R F+F+EVNDGS ANLQV++D +AD +L+ TG
Sbjct: 13 GQADDQVMVQGWLRTKRTLK--DFSFVEVNDGSSLANLQVVLDGSLADYDRLLSQLQTGA 70
Query: 101 CVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTN 160
+ VEG L P G Q++EL+ K+ +G DP YP+ K + + EFLR RPRTN
Sbjct: 71 ALVVEGKLA-PSPGKGQRVELKATKLELLGGADPGSYPLQKKRHSFEFLRTIGHLRPRTN 129
Query: 161 TIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
TI AV R+RNA A A H F Q++GFL++HTPIIT SDCEGAG++F+VTTL
Sbjct: 130 TIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTL 179
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 61/73 (83%)
Query: 286 IPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEF 345
+P+ IDY+QDFF +QA+LTVSGQL+ E A A NVYTFGPTFRAE+S+TSRHLAEF
Sbjct: 184 VPKNGEGIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAENSNTSRHLAEF 243
Query: 346 WMVEPEMAFSDLK 358
WMVEPEMAF DL+
Sbjct: 244 WMVEPEMAFCDLE 256
>sp|Q74E08|SYN_GEOSL Asparagine--tRNA ligase OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=asnS PE=3 SV=1
Length = 461
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 122/187 (65%), Gaps = 13/187 (6%)
Query: 27 SDRVLIKSILTRPDGGAGL-AGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIV 85
++R+ I+ IL AG AG +V V GWV+T R GKG AFL VNDGSC A+LQV+
Sbjct: 2 NERIRIREIL------AGTPAGTEVIVKGWVRTSR-VGKG-VAFLAVNDGSCLASLQVVA 53
Query: 86 DKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTK 143
+ +A+ +L + TG V V G++ P Q +EL KVV VG D +YP+ K +
Sbjct: 54 EPGLANYHELRGIGTGAAVAVRGIVAESP-AAGQAVELHATKVVVVGGAD-EQYPLQKKR 111
Query: 144 LTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGE 203
T E+LR RPR+NT AV R+R++LA A H F ++GFLY+HTPIITTSDCEGAGE
Sbjct: 112 HTFEYLRTIAHLRPRSNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITTSDCEGAGE 171
Query: 204 MFQVTTL 210
+F+VTTL
Sbjct: 172 LFRVTTL 178
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 267 TKAKENLAKLEERSKLKPGIP-QKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVY 325
T E +L + L P P DG +D++QDFFA QA LTVSGQL+ E +A A S++Y
Sbjct: 163 TSDCEGAGELFRVTTLDPSAPPMADGAVDFSQDFFAAQAGLTVSGQLEGELFAQAFSDIY 222
Query: 326 TFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
TFGPTFRAE+S+T RH AEFWM+EPEMAF+DL+
Sbjct: 223 TFGPTFRAENSNTPRHAAEFWMIEPEMAFADLR 255
>sp|Q7MVE5|SYN_PORGI Asparagine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=asnS PE=3 SV=1
Length = 469
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 43 AGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGT 100
GL G+++ + GWV+T R G + F+ +NDGS N+Q++ D D Q+ + TG
Sbjct: 16 GGLVGQEINIKGWVRTKR--GNKAVNFIALNDGSTIHNMQIVADLASFDAAQMSQITTGA 73
Query: 101 CVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTN 160
C+ V G L +G Q +E++ + G DPA YP+ K TLEFLR+ RPRTN
Sbjct: 74 CIGVIGTLVES-QGAGQSVEVQASAIEIYGTADPATYPLQKKGHTLEFLREIAHLRPRTN 132
Query: 161 TIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDA 214
T A+ RIR+ +A A HTF +G+ Y H P+IT SDCEGAG+MFQVTTL D+
Sbjct: 133 TFGAIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMFQVTTLNPDS 186
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Query: 271 ENLAKLEERSKLKP-GIPQ-KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFG 328
E ++ + + L P +P+ ++G++DY +DFF R LTVSGQL+ E A A+ +YTFG
Sbjct: 171 EGAGQMFQVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFG 230
Query: 329 PTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
PTFRAE+S+T RHLAEFWM+EPE+AF +++
Sbjct: 231 PTFRAENSNTPRHLAEFWMIEPEVAFLEIE 260
>sp|P58692|SYN_NOSS1 Asparagine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=asnS PE=3 SV=1
Length = 463
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 107/162 (66%), Gaps = 6/162 (3%)
Query: 52 VGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP---TGTCVYVEGML 108
V GWV+T RE KG FAF+EVNDGS NLQV++++D+ D +V TG V V G+L
Sbjct: 21 VQGWVRTKREL-KG-FAFIEVNDGSSLGNLQVVINQDLPDYAVIVKQLNTGASVEVNGVL 78
Query: 109 KNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARI 168
+G Q+IEL+ + V G DP YP+ K + + EFLR R RTN+ AV R+
Sbjct: 79 V-ASQGKGQRIELKAEAVKVYGEADPETYPLQKKRHSFEFLRTIGHLRSRTNSFGAVFRV 137
Query: 169 RNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RNA + A H F Q++GFL++HTPIIT SDCEGAGE+F VT+L
Sbjct: 138 RNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSL 179
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
Query: 286 IPQKDGK-IDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
IP+ + + IDY+QDFFA+ +LTVSGQL+ E A A SNVYTFGPTFRAE+S+TSRHLAE
Sbjct: 184 IPRTENQGIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAE 243
Query: 345 FWMVEPEMAFSDLK 358
FWMVEPEMAF DL+
Sbjct: 244 FWMVEPEMAFCDLE 257
>sp|B2RK42|SYN_PORG3 Asparagine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
33277 / DSM 20709 / JCM 12257) GN=asnS PE=3 SV=1
Length = 469
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
Query: 43 AGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGT 100
GL G+++ + GWV+T R G + F+ +NDGS N+Q++ D D Q+ + TG
Sbjct: 16 GGLVGQEINIKGWVRTKR--GNKAVNFIALNDGSTIHNMQIVADLASFDAAQMSQITTGA 73
Query: 101 CVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTN 160
C+ V G L +G Q +E++ + G DPA YP+ K TLEFLR+ RPRTN
Sbjct: 74 CIGVIGTLVES-QGAGQSVEVQASAIEIYGTADPATYPLQKKGHTLEFLREIAHLRPRTN 132
Query: 161 TIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDA 214
T + RIR+ +A A HTF +G+ Y H P+IT SDCEGAG+MFQVTTL D+
Sbjct: 133 TFGVIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMFQVTTLNPDS 186
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Query: 271 ENLAKLEERSKLKP-GIPQ-KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFG 328
E ++ + + L P +P+ ++G++DY +DFF R LTVSGQL+ E A A+ +YTFG
Sbjct: 171 EGAGQMFQVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFG 230
Query: 329 PTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
PTFRAE+S+T RHLAEFWM+EPE+AF +++
Sbjct: 231 PTFRAENSNTPRHLAEFWMIEPEVAFLEIE 260
>sp|A0PY64|SYN_CLONN Asparagine--tRNA ligase OS=Clostridium novyi (strain NT) GN=asnS
PE=3 SV=1
Length = 463
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 119/202 (58%), Gaps = 19/202 (9%)
Query: 30 VLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV 89
VL+K + + AG++V++ GW++T R K F F+EVNDGS N+QV+ ++
Sbjct: 4 VLVKQLYRETEK---FAGKEVKISGWIRTLRASNK--FGFIEVNDGSFFKNIQVVFGAEL 58
Query: 90 ADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLE 147
+ ++ + + VEG + EG KQ E+ +KVV G D A YP+ K + T E
Sbjct: 59 ENFKEISKYAISSSISVEGEVV-ITEGAKQPFEIHAKKVVLEGKSD-ADYPLQKKRHTFE 116
Query: 148 FLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQV 207
+LR RPR+N +AV R+R+ AYA H F Q QGF+Y+HTPIIT SDCEGAGEMF+V
Sbjct: 117 YLRSIAHLRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRV 176
Query: 208 TTLISDADKLEKELIKNPPPSE 229
TTL ++NPP E
Sbjct: 177 TTLD----------MENPPKDE 188
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Query: 287 PQKD--GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
P KD G +DY +DFF +QA LTVSGQL+ E YA A NVYTFGPTFRAE+S+T+RH +E
Sbjct: 184 PPKDEKGNVDYKEDFFGKQANLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHASE 243
Query: 345 FWMVEPEMAFSDLK 358
FWM+EPEMAF++LK
Sbjct: 244 FWMIEPEMAFAELK 257
>sp|B6YRL1|SYN_AZOPC Asparagine--tRNA ligase OS=Azobacteroides pseudotrichonymphae
genomovar. CFP2 GN=asnS PE=3 SV=1
Length = 464
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 114/186 (61%), Gaps = 14/186 (7%)
Query: 29 RVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKD 88
R I +L+ PD R+V V GWV+T R G + +F+E+NDGS +Q++V+
Sbjct: 5 RARIVDLLSTPD-----FNRKVCVKGWVRTRR--GNKNISFIELNDGSTVHGIQIVVN-- 55
Query: 89 VADLGQ----LVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKL 144
V LG+ + TG C+ + G+L +G QK+E++ ++ G+ DP+ YP+ K
Sbjct: 56 VVKLGEDSLKSITTGACIAINGLLVKS-KGEGQKVEIQADEIEIYGIADPSVYPLQKKWH 114
Query: 145 TLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEM 204
+LEFLR+ RPRTNT + RIR+ LAYA H + KQGF Y HTPIIT+SD EGAG M
Sbjct: 115 SLEFLREIAYLRPRTNTFGCILRIRHHLAYAIHKYFNKQGFFYFHTPIITSSDAEGAGSM 174
Query: 205 FQVTTL 210
FQ+T L
Sbjct: 175 FQITDL 180
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
KDG++DYT+DFF LTVSGQL+ E A A+ +YTFGP FRAE S+T RHLAEFWM+
Sbjct: 189 KDGEVDYTRDFFGCSTNLTVSGQLEGELGALALGGIYTFGPIFRAEKSNTPRHLAEFWMI 248
Query: 349 EPEMAFSDLK 358
EPE+AF D+
Sbjct: 249 EPEIAFYDIN 258
>sp|Q24MK1|SYN_DESHY Asparagine--tRNA ligase OS=Desulfitobacterium hafniense (strain
Y51) GN=asnS PE=3 SV=1
Length = 463
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 127/211 (60%), Gaps = 18/211 (8%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
+ LIKSI D A L +++++ GWV+T R SF F+E+NDGS +QV+ ++
Sbjct: 2 ENTLIKSIYR--DTPAYL-NQELQISGWVRTLRVSK--SFGFIEINDGSFFKGIQVVFEE 56
Query: 88 DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
D+ + ++ V TG+ + ++G+L P G KQ EL+ Q ++ G YP+ K + +
Sbjct: 57 DLNNFEEIAKVATGSSLIIKGLLVESP-GAKQPFELKAQSIMIEGAC-SGDYPLQKKRHS 114
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
E+LR RPRTNT AAV R+R+ +AYA H F Q +GF+YIHTPIIT SD EGAGEMF
Sbjct: 115 FEYLRTIAHLRPRTNTFAAVFRVRSLVAYAIHKFFQDKGFVYIHTPIITGSDAEGAGEMF 174
Query: 206 QVTTLISDADKLEKELIKNPPPSEADIEAAK 236
+VTTL D D L P E I+ AK
Sbjct: 175 RVTTL--DLDAL-------PRTEEGRIDYAK 196
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 59/70 (84%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
++G+IDY +DFF ++ LTVSGQL ETY A NVYTFGPTFRAE+S+T+RH AEFWM+
Sbjct: 188 EEGRIDYAKDFFGKETNLTVSGQLNAETYCMAFRNVYTFGPTFRAENSNTARHAAEFWMI 247
Query: 349 EPEMAFSDLK 358
EPE+AF+DL+
Sbjct: 248 EPEIAFADLQ 257
>sp|Q72G53|SYN_DESVH Asparagine--tRNA ligase OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=asnS PE=3
SV=1
Length = 461
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 107/164 (65%), Gaps = 7/164 (4%)
Query: 50 VRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV---ADLGQLVPTGTCVYVEG 106
+R+ GWV+T R KG F+FLE+NDGSC AN+Q IVD+ + A++G V TG V + G
Sbjct: 19 IRLCGWVRT-RRDAKG-FSFLEINDGSCLANIQAIVDEGIPAYANIGA-VSTGAAVDITG 75
Query: 107 MLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVA 166
L P G QK E+RVQ + +G D YP+ K + + EFLR R RTN A
Sbjct: 76 ELVESP-GKGQKWEVRVQTLTLLGAADAETYPLQKKRHSDEFLRSIAHLRARTNKYGAAF 134
Query: 167 RIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RIR+ A+A H F +++GF Y+HTPI+T SDCEGAGEMF+VTTL
Sbjct: 135 RIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGEMFRVTTL 178
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 51/64 (79%)
Query: 295 YTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAF 354
Y DFF ++ LTVSGQL+ ET A + VYTFGPTFRAE+S+T RH AEFWM+EPE+AF
Sbjct: 192 YENDFFGKECNLTVSGQLEAETLALGLGKVYTFGPTFRAENSNTPRHAAEFWMIEPEVAF 251
Query: 355 SDLK 358
+DL+
Sbjct: 252 ADLE 255
>sp|Q39SY7|SYN_GEOMG Asparagine--tRNA ligase OS=Geobacter metallireducens (strain GS-15
/ ATCC 53774 / DSM 7210) GN=asnS PE=3 SV=1
Length = 461
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 118/186 (63%), Gaps = 11/186 (5%)
Query: 27 SDRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVD 86
S R+ I++ L G GL G ++ V GWV+T R GK AFL +NDGSC ANLQV+ +
Sbjct: 2 SARIRIRNALA----GEGL-GNEIMVKGWVRTIR-TGK-EVAFLALNDGSCFANLQVVAE 54
Query: 87 KDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKL 144
+A + + TG V V G L + P + Q EL +V +G+ D + YP+ K +
Sbjct: 55 PGLATFADVCAIGTGAAVAVRGRLVDSP-ASGQCYELHADEVAVIGLADES-YPLQKKRH 112
Query: 145 TLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEM 204
+ E+LR RPR+NT AV R+R+++A A H F ++GFLY+HTPIITTSDCEGAGEM
Sbjct: 113 SFEYLRSIAHLRPRSNTFGAVFRVRSSVAQAVHRFFAERGFLYVHTPIITTSDCEGAGEM 172
Query: 205 FQVTTL 210
F+VTTL
Sbjct: 173 FRVTTL 178
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 58/68 (85%)
Query: 287 PQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFW 346
P +G++D+++DFFA QA LTVSGQL+ E +A A S++YTFGPTFRAE+S+T RH AEFW
Sbjct: 184 PLLEGEVDFSRDFFAAQAGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTPRHAAEFW 243
Query: 347 MVEPEMAF 354
M+EPEMAF
Sbjct: 244 MIEPEMAF 251
>sp|A1V9B8|SYN_DESVV Asparagine--tRNA ligase OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=asnS PE=3 SV=1
Length = 461
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 107/164 (65%), Gaps = 7/164 (4%)
Query: 50 VRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV---ADLGQLVPTGTCVYVEG 106
+R+ GWV+T R KG F+FLE+NDGSC AN+Q IVD+ + A++G V TG V + G
Sbjct: 19 IRLCGWVRT-RRDAKG-FSFLEINDGSCLANIQAIVDEGIPAYANIGA-VSTGAAVDITG 75
Query: 107 MLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVA 166
L P G QK E+RVQ + +G D YP+ K + + EFLR R RTN A
Sbjct: 76 ELVESP-GKGQKWEVRVQTLTLLGAADAETYPLQKKRHSDEFLRSIAHLRARTNKYGAAF 134
Query: 167 RIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RIR+ A+A H F +++GF Y+HTPI+T SDCEGAGEMF+VTTL
Sbjct: 135 RIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGEMFRVTTL 178
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 53/74 (71%)
Query: 285 GIPQKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAE 344
G P Y DFF ++ LTVSGQL+ ET A + VYTFGPTFRAE+S+T RH AE
Sbjct: 182 GSPTPASGNRYENDFFGKECNLTVSGQLEAETLALGLGKVYTFGPTFRAENSNTPRHAAE 241
Query: 345 FWMVEPEMAFSDLK 358
FWM+EPE+AF+DL+
Sbjct: 242 FWMIEPEVAFADLE 255
>sp|B2UXS0|SYN_CLOBA Asparagine--tRNA ligase OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=asnS PE=3 SV=1
Length = 464
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 9/195 (4%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
+ VLIK I D ++V + GW++T R +F F+E+NDGS N+QV+ D
Sbjct: 3 NTVLIKKIYRETDQ---FLSKEVMISGWIRTLR--ASNAFGFIEINDGSFFKNIQVVFDD 57
Query: 88 DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
+ + ++ +P + + V G L P+ KQ E++ +++V GM + + YP+ K + T
Sbjct: 58 KLGNFKEISKLPISSSISVVGTLVATPDA-KQPFEIQAKEIVIEGMSN-SDYPLQKKRHT 115
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
E+LR RPR+N +A R+R+ A+A H F Q+QGF+Y HTPIIT SDCEGAGEMF
Sbjct: 116 FEYLRSIAHLRPRSNAFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMF 175
Query: 206 QVTTLISDADKLEKE 220
+VTTL A +L KE
Sbjct: 176 RVTTLDPKAPELTKE 190
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 280 SKLKPGIPQ--KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSH 337
+ L P P+ K+G IDYT+DFF ++ LTVSGQL E +A A N+YTFGPTFRAE+S+
Sbjct: 178 TTLDPKAPELTKEGNIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSN 237
Query: 338 TSRHLAEFWMVEPEMAFSDLK 358
T+RH AEFWM+EPE+AF+DL+
Sbjct: 238 TTRHAAEFWMIEPEIAFADLQ 258
>sp|B2TI01|SYN_CLOBB Asparagine--tRNA ligase OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=asnS PE=3 SV=1
Length = 464
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 9/195 (4%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
+ VLIK I D ++V + GW++T R +F F+E+NDGS N+QV+ D
Sbjct: 3 NTVLIKKIYRETDQ---FLSKEVMISGWIRTLR--ASNAFGFIEINDGSFFKNIQVVFDD 57
Query: 88 DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
+ + ++ +P + + V G L P+ KQ E++ +++V GM + + YP+ K + T
Sbjct: 58 KLGNFKEISKLPISSSISVVGTLVATPDA-KQPFEIQAKEIVIEGMSN-SDYPLQKKRHT 115
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
E+LR RPR+N +A R+R+ A+A H F Q+QGF+Y HTPIIT SDCEGAGEMF
Sbjct: 116 FEYLRSIAHLRPRSNAFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMF 175
Query: 206 QVTTLISDADKLEKE 220
+VTTL A +L KE
Sbjct: 176 RVTTLDPKAPELTKE 190
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 280 SKLKPGIPQ--KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSH 337
+ L P P+ K+G IDYT+DFF ++ LTVSGQL E +A A N+YTFGPTFRAE+S+
Sbjct: 178 TTLDPKAPELTKEGDIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSN 237
Query: 338 TSRHLAEFWMVEPEMAFSDLK 358
T+RH AEFWM+EPE+AF+DL+
Sbjct: 238 TTRHAAEFWMIEPEIAFADLQ 258
>sp|A6LIA1|SYN_PARD8 Asparagine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=asnS PE=3 SV=1
Length = 468
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 100/165 (60%), Gaps = 5/165 (3%)
Query: 47 GRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP--TGTCVYV 104
G V V GWV+T R G F+ +NDGS N+Q++VD D L P TG + V
Sbjct: 19 GTTVNVKGWVRTRR--GSKQVNFIALNDGSTINNVQIVVDVDKLGDEFLKPITTGASISV 76
Query: 105 EGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAA 164
G+L +G Q +E++ ++ G DPA YP+ K ++EFLR+ RPRTNT A
Sbjct: 77 NGILTQS-QGKGQSVEIQATEIEIFGTADPATYPLQKKGHSMEFLREIAHLRPRTNTFGA 135
Query: 165 VARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTT 209
V RIR+ +AYA H F +GF Y HTPIIT SDCEGAG+MFQVTT
Sbjct: 136 VFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTT 180
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 56/69 (81%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
++G I Y DFF +QA LTVSGQL+ E A A+ +YTFGPTFRAE+S+T RHLAEFWM+
Sbjct: 190 ENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAENSNTPRHLAEFWMI 249
Query: 349 EPEMAFSDL 357
EPE+AF+D+
Sbjct: 250 EPEVAFNDI 258
>sp|Q899M9|SYN_CLOTE Asparagine--tRNA ligase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=asnS PE=3 SV=1
Length = 463
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 112/184 (60%), Gaps = 9/184 (4%)
Query: 29 RVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKD 88
++ IK + P+ + + V GW++T E+ +F F+E+NDGS NLQ+I+D +
Sbjct: 3 KISIKQLYREPEK---FINKDIVVAGWIRT--ERTSKNFGFIELNDGSFFKNLQIIIDTN 57
Query: 89 VADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTL 146
+ + ++ +P + + VEG L P KQ E++ KV G YP+ K + +
Sbjct: 58 LDNFDKVSKLPISSSIVVEGKLVATP-SAKQPFEVQASKVTVEG-TSLQDYPLQKKRHSF 115
Query: 147 EFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQ 206
EFLR RPR+NT +AV RIR+ AYA H F Q++ F+Y+HTPIIT SDCEGAGEMF+
Sbjct: 116 EFLRSIAHLRPRSNTFSAVFRIRSLAAYAVHKFFQEKNFVYVHTPIITASDCEGAGEMFR 175
Query: 207 VTTL 210
VTTL
Sbjct: 176 VTTL 179
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 285 GIPQKD-GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLA 343
IP+ D GKID++QDFF + A LTVSGQL E+YA A NVYTFGPTFRAE+S+T+RH +
Sbjct: 183 NIPKNDEGKIDFSQDFFDKDAKLTVSGQLSAESYALAFGNVYTFGPTFRAENSNTARHAS 242
Query: 344 EFWMVEPEMAFSDL 357
EFWM+EPEMAF+DL
Sbjct: 243 EFWMIEPEMAFADL 256
>sp|Q023P9|SYN_SOLUE Asparagine--tRNA ligase OS=Solibacter usitatus (strain Ellin6076)
GN=asnS PE=3 SV=1
Length = 461
Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 109/181 (60%), Gaps = 11/181 (6%)
Query: 32 IKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVA- 90
++S+L R G V GWVKT R+ + F+++NDGS P +LQV++D V
Sbjct: 8 VRSLLKRS------PGESVTARGWVKTRRD--SKNVHFIQLNDGSSPVDLQVVLDAGVVP 59
Query: 91 -DLGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFL 149
D+ + TG C+ VEG L G Q +E++ + + G DP YP+ K K TLE L
Sbjct: 60 EDVVAKITTGACISVEGDLV-ASMGKGQAVEIKARALTVHGTADPEHYPLQKKKHTLETL 118
Query: 150 RDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTT 209
R+ R R+NT AV R+RNALA A H F Q +GF+Y+HTP+I+ SD EGAG MFQVTT
Sbjct: 119 RELGHLRTRSNTFGAVFRVRNALACAIHKFFQDRGFMYVHTPVISASDAEGAGSMFQVTT 178
Query: 210 L 210
L
Sbjct: 179 L 179
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 55/65 (84%)
Query: 294 DYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMA 353
D+T DFF + +LTVSGQL+ E +A A +NVYTFGPTFRAE+S+T RHLAEF+M+EPEMA
Sbjct: 188 DFTGDFFGKHTYLTVSGQLEAEIFAHAFANVYTFGPTFRAENSNTPRHLAEFYMIEPEMA 247
Query: 354 FSDLK 358
F DLK
Sbjct: 248 FCDLK 252
>sp|B0JN99|SYN_MICAN Asparagine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843)
GN=asnS PE=3 SV=1
Length = 454
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 106/170 (62%), Gaps = 7/170 (4%)
Query: 44 GLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL---VPTGT 100
G + V V GWV+T RE + F FLEVNDGS ANLQVI++ + D + + TG
Sbjct: 12 GQPDQSVTVQGWVRTKRELKE--FTFLEVNDGSSLANLQVILEPTLPDYENVLKTISTGA 69
Query: 101 CVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTN 160
+ V G L P G Q IEL+ ++ G P YP+ K + + EFLR R RTN
Sbjct: 70 AIAVSGNLV-PSPGKGQNIELKAAEITLYGDC-PPDYPLQKKRHSFEFLRTIAHLRARTN 127
Query: 161 TIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
T+ AV R+RNA A A H+F Q++GF+++HTPIIT +DCEGAGE+F VT+L
Sbjct: 128 TLGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGELFTVTSL 177
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 58/65 (89%)
Query: 294 DYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMA 353
++ +DFF ++A+LTVSGQLQ E A A+SNVYTFGPTFRAE+S+TSRHLAEFWMVEPEMA
Sbjct: 184 NFAEDFFGKRAYLTVSGQLQAEVMAMALSNVYTFGPTFRAENSNTSRHLAEFWMVEPEMA 243
Query: 354 FSDLK 358
F DL+
Sbjct: 244 FCDLE 248
>sp|Q8A0Z8|SYN_BACTN Asparagine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=asnS PE=3 SV=1
Length = 467
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 112/184 (60%), Gaps = 11/184 (5%)
Query: 29 RVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKD 88
R I +L R D GA V V GWV+T R G F+ +NDGS N+Q++VD
Sbjct: 6 RTKIVDLLKREDIGA-----MVNVKGWVRTRR--GSKQVNFIALNDGSTINNVQIVVDLA 58
Query: 89 VAD--LGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTL 146
D + +L+ TG C+ V G++ G+ QK+E++ +++ +G D YP+ K ++
Sbjct: 59 NFDEEMLKLITTGACISVNGVMVESV-GSGQKVEVQAKEIEVLGTCDNT-YPLQKKGHSM 116
Query: 147 EFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQ 206
EFLR+ RPRTNT AV RIR+ +A A H F ++GF Y HTPIIT SDCEGAG+MFQ
Sbjct: 117 EFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGAGQMFQ 176
Query: 207 VTTL 210
VTT+
Sbjct: 177 VTTM 180
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 291 GKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEP 350
G I Y DFF +QA LTVSGQL+ E A A+ +YTFGPTFRAE+S+T RHLAEFWM+EP
Sbjct: 191 GSISYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAENSNTPRHLAEFWMIEP 250
Query: 351 EMAFSDL 357
E+AF+D+
Sbjct: 251 EVAFNDI 257
>sp|Q0SQ51|SYN_CLOPS Asparagine--tRNA ligase OS=Clostridium perfringens (strain SM101 /
Type A) GN=asnS PE=3 SV=1
Length = 465
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 10/186 (5%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
D VL+KS+ + + ++V++ GW++T R +F F+EVNDGS N+QV+ D
Sbjct: 3 DVVLVKSLYRNT---SEYSDKKVKISGWIRTLR--ASNAFGFIEVNDGSFFKNVQVVFDS 57
Query: 88 -DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKL 144
+++ ++ +P + + V G L P+ +KQ E++ ++++ GM D + YP+ K +
Sbjct: 58 AKISNYKEISKLPISSSISVIGTLVETPD-SKQPFEIQAEEIIVEGMSD-SDYPLQKKRH 115
Query: 145 TLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEM 204
T E+LR RPR+N +A R+R+ AYA H F Q QGF+Y HTPI+T SDCEGAGEM
Sbjct: 116 TFEYLRTIAHLRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEM 175
Query: 205 FQVTTL 210
F+VTTL
Sbjct: 176 FRVTTL 181
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 57/69 (82%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
++G ID++QDFF ++ LTVSGQL E +A A N+YTFGPTFRAE+S+T +H AEFWM+
Sbjct: 190 EEGGIDFSQDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTVKHAAEFWMI 249
Query: 349 EPEMAFSDL 357
EPEMAF+DL
Sbjct: 250 EPEMAFADL 258
>sp|P58693|SYN_CLOPE Asparagine--tRNA ligase OS=Clostridium perfringens (strain 13 /
Type A) GN=asnS PE=3 SV=1
Length = 465
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 10/186 (5%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
D VL+KS+ + + ++V++ GW++T R +F F+EVNDGS N+QV+ D
Sbjct: 3 DVVLVKSLYRNT---SEYSDKKVKISGWIRTLR--ASNAFGFIEVNDGSFFKNVQVVFDS 57
Query: 88 -DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKL 144
+++ ++ +P + + V G L P+ +KQ E++ ++++ GM D + YP+ K +
Sbjct: 58 AKISNYKEISKLPISSSISVIGTLVETPD-SKQPFEIQAEEIIVEGMSD-SDYPLQKKRH 115
Query: 145 TLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEM 204
T E+LR RPR+N +A R+R+ AYA H F Q QGF+Y HTPI+T SDCEGAGEM
Sbjct: 116 TFEYLRTIAHLRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEM 175
Query: 205 FQVTTL 210
F+VTTL
Sbjct: 176 FRVTTL 181
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 57/69 (82%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
++G ID++QDFF ++ LTVSGQL E +A A N+YTFGPTFRAE+S+T +H AEFWM+
Sbjct: 190 EEGGIDFSQDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTVKHAAEFWMI 249
Query: 349 EPEMAFSDL 357
EPEMAF+DL
Sbjct: 250 EPEMAFADL 258
>sp|Q0TMF3|SYN_CLOP1 Asparagine--tRNA ligase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=asnS PE=3 SV=1
Length = 465
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 10/186 (5%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
D VL+KS+ + + ++V++ GW++T R +F F+EVNDGS N+QV+ D
Sbjct: 3 DVVLVKSLYRNT---SEYSDKKVKISGWIRTLR--ASNAFGFIEVNDGSFFKNVQVVFDS 57
Query: 88 -DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKL 144
+++ ++ +P + + V G L P+ +KQ E++ ++++ GM D + YP+ K +
Sbjct: 58 AKISNYKEISKLPISSSISVIGTLVETPD-SKQPFEIQAEEIIVEGMSD-SDYPLQKKRH 115
Query: 145 TLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEM 204
T E+LR RPR+N +A R+R+ AYA H F Q QGF+Y HTPI+T SDCEGAGEM
Sbjct: 116 TFEYLRTIAHLRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEM 175
Query: 205 FQVTTL 210
F+VTTL
Sbjct: 176 FRVTTL 181
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 57/69 (82%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
++G ID++QDFF ++ LTVSGQL E +A A N+YTFGPTFRAE+S+T +H AEFWM+
Sbjct: 190 EEGGIDFSQDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTVKHAAEFWMI 249
Query: 349 EPEMAFSDL 357
EPEMAF+DL
Sbjct: 250 EPEMAFADL 258
>sp|Q11Q97|SYN_CYTH3 Asparagine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC
33406 / NCIMB 9469) GN=asnS PE=3 SV=1
Length = 464
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 114/184 (61%), Gaps = 8/184 (4%)
Query: 29 RVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKD 88
R+ IK +L+ + +QV + GWV+T R G AF+ +NDGS +Q+++D
Sbjct: 3 RIKIKELLSN---SSQYIDQQVVLKGWVRTKR--GNKHVAFVALNDGSTIHTIQIVLDVA 57
Query: 89 VADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTL 146
+ QL V TG C+ + G + +G Q IE++ + +G+ DP YP+ K +L
Sbjct: 58 KFNEEQLKDVTTGACISISGKVVTS-QGAGQSIEVQGDTLEVIGVADPETYPLQKKGHSL 116
Query: 147 EFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQ 206
EFLR+ RPRTNT + V R+R+A+A+A H+F ++GF+Y+HTPIIT SD EGAG MFQ
Sbjct: 117 EFLREIAHLRPRTNTFSCVLRLRHAMAFAVHSFFNEKGFVYVHTPIITGSDAEGAGAMFQ 176
Query: 207 VTTL 210
VTTL
Sbjct: 177 VTTL 180
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 59/70 (84%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
K+G++D+T+DFF + LTVSGQL+ E A A+ VYTFGPTFRAE+S+T+RHLAEFWM+
Sbjct: 189 KEGEVDFTKDFFGKATNLTVSGQLEGELAAMALGEVYTFGPTFRAENSNTTRHLAEFWMI 248
Query: 349 EPEMAFSDLK 358
EPEMAF +++
Sbjct: 249 EPEMAFYEIQ 258
>sp|B1XKH1|SYN_SYNP2 Asparagine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=asnS PE=3 SV=1
Length = 460
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 102/160 (63%), Gaps = 6/160 (3%)
Query: 54 GWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP---TGTCVYVEGMLKN 110
GWVKT RE KG F+F+E++DGS LQVI+D ++AD ++ TG V G++
Sbjct: 20 GWVKTKREL-KG-FSFIEISDGSTMNGLQVIIDGNLADYEAIIKKLNTGAAVTATGLVVE 77
Query: 111 PPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRN 170
P G Q+IEL+ + V G DP YP+ K + + EFLR R +TNT+ AV R+RN
Sbjct: 78 SP-GKGQRIELQAKAVTVHGEADPETYPLQKKRHSFEFLRTIGHLRGKTNTMGAVMRVRN 136
Query: 171 ALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
A A A H F Q++GF++ HTPIIT SDCEGAGEMF VT
Sbjct: 137 ACATAIHQFFQERGFIWAHTPIITASDCEGAGEMFAVTNF 176
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 58/69 (84%)
Query: 289 KDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMV 348
K+G +DY +DFF R A+LTVSGQL+ E A A +VYTFGPTFRAE+S+TSRHLAEFWMV
Sbjct: 185 KEGAVDYAEDFFGRPAYLTVSGQLEAEVMAMAFKDVYTFGPTFRAENSNTSRHLAEFWMV 244
Query: 349 EPEMAFSDL 357
EPEMAF D+
Sbjct: 245 EPEMAFCDI 253
>sp|A7GB01|SYN_CLOBL Asparagine--tRNA ligase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=asnS PE=3 SV=1
Length = 463
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
D L+KS+ + ++V++ GWV+T R+ +FAF+EVNDGS N+QVI++
Sbjct: 2 DITLVKSLYREAEK---YMDKEVKINGWVRTVRDSK--NFAFVEVNDGSFFKNVQVILES 56
Query: 88 DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
+ + +L +P T V VEG+++ P KQ E++ +V G YP+ K + T
Sbjct: 57 SLENFKELCKMPISTSVEVEGIIQ-PTPNAKQPFEIKATRVSIEGK-SSTDYPLQKKRHT 114
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
E+LR RPR+N +AV R+R+ AYA H F Q++GF+Y +TPIIT SDCEGAGEMF
Sbjct: 115 FEYLRTIAHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMF 174
Query: 206 QVTTL 210
Q+TT+
Sbjct: 175 QLTTM 179
>sp|Q317J6|SYN_DESDG Asparagine--tRNA ligase OS=Desulfovibrio desulfuricans (strain G20)
GN=asnS PE=3 SV=1
Length = 461
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 7/164 (4%)
Query: 50 VRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDV---ADLGQLVPTGTCVYVEG 106
+R+ GWV+T R KG F+FLE+NDGSC N+QVIVD++ +G+ TG V + G
Sbjct: 19 IRICGWVRT-RRDAKG-FSFLELNDGSCLTNIQVIVDEETDAYRSVGE-ATTGASVDIRG 75
Query: 107 MLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVA 166
L P G QK E+R + +G DP +P+ K + + E+LR RPRTN A
Sbjct: 76 QLVESP-GKGQKWEVRAATMTLLGKADPETFPLQKKRHSDEYLRTIAHLRPRTNKFGAAF 134
Query: 167 RIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 210
RIR +YA H+F ++ GF +HTPI+T SDCEGAGEMF+VTTL
Sbjct: 135 RIRAEASYAVHSFFRENGFFNVHTPILTGSDCEGAGEMFRVTTL 178
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 51/64 (79%)
Query: 295 YTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAF 354
+ DFF ++ LTVSGQL+ E A ++ VYTFGPTFRAE+S+T RH AEFWMVEPEMAF
Sbjct: 192 FDGDFFGKECSLTVSGQLEAEIMAQSLGKVYTFGPTFRAENSNTPRHAAEFWMVEPEMAF 251
Query: 355 SDLK 358
+DL+
Sbjct: 252 ADLE 255
>sp|A5N4F7|SYN_CLOK5 Asparagine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 /
DSM 555 / NCIMB 10680) GN=asnS PE=3 SV=1
Length = 463
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 121/194 (62%), Gaps = 11/194 (5%)
Query: 29 RVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKD 88
+ L+KS+ + + + + GW++T R+ SFAF+E+NDGS N+QV++D
Sbjct: 3 KTLVKSLYRETEK---FIDKDIEISGWIRTIRDSK--SFAFIELNDGSFFKNVQVVLDDK 57
Query: 89 VADLGQLV--PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTL 146
+ + +++ P + + VEG L P KQ E++ +K+ G ++YP+ K + TL
Sbjct: 58 IENFKEIIKLPISSSLSVEGTLILTP-NAKQSFEIKAKKISLEGN-SSSEYPLQKKRHTL 115
Query: 147 EFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQ 206
E+LR RPR+NT +AV R+R+ AYA H F Q++ F+Y++TPIIT SDCEGAGEMF+
Sbjct: 116 EYLRTIAHLRPRSNTFSAVFRVRSIAAYAVHKFFQEKDFVYVNTPIITGSDCEGAGEMFR 175
Query: 207 VTTLISDADKLEKE 220
+TT+ D + + KE
Sbjct: 176 ITTM--DLNNVPKE 187
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%)
Query: 288 QKDGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWM 347
++D +D+++DFF ++ LTVSGQL ET A A NVYTFGPTFRAE S+TSRH AEFWM
Sbjct: 187 EEDNSVDFSKDFFGKETNLTVSGQLSAETMALAFRNVYTFGPTFRAEDSNTSRHAAEFWM 246
Query: 348 VEPEMAFSDLK 358
+EPEMAF++LK
Sbjct: 247 IEPEMAFAELK 257
>sp|Q8DG51|SYN_THEEB Asparagine--tRNA ligase OS=Thermosynechococcus elongatus (strain
BP-1) GN=asnS PE=3 SV=1
Length = 462
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 108/182 (59%), Gaps = 11/182 (6%)
Query: 32 IKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVAD 91
IK IL + G G ++ V GWV+T RE + +F + +NDGS A LQV++ VA
Sbjct: 5 IKDILHQ-----GQVGDRITVKGWVRTKRELKECTF--VNLNDGSTLAGLQVVIPNTVAA 57
Query: 92 LG---QLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEF 148
+ + TG G L P G Q IEL +++ G DP YP+ K + + EF
Sbjct: 58 ATPTMKDLTTGAAAEFTGELVRSP-GKNQAIELHAEEIHLWGTADPETYPLQKKRHSFEF 116
Query: 149 LRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVT 208
LR RPRTNT+ AV R+RNA A A H F Q++GFL++HTPIIT SDCEGAGE+F VT
Sbjct: 117 LRTIAHLRPRTNTLGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGELFTVT 176
Query: 209 TL 210
TL
Sbjct: 177 TL 178
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 62/69 (89%)
Query: 290 DGKIDYTQDFFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVE 349
+GKID++QDFF R+A+LTVSGQL+ E A A +NVYTFGPTFRAE+S+TSRHLAEFWMVE
Sbjct: 188 EGKIDFSQDFFGRRAYLTVSGQLEAEIMATAFTNVYTFGPTFRAENSNTSRHLAEFWMVE 247
Query: 350 PEMAFSDLK 358
PEMAF DL+
Sbjct: 248 PEMAFCDLR 256
>sp|Q1MQG9|SYN_LAWIP Asparagine--tRNA ligase OS=Lawsonia intracellularis (strain
PHE/MN1-00) GN=asnS PE=3 SV=1
Length = 455
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 102/162 (62%), Gaps = 5/162 (3%)
Query: 50 VRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVA--DLGQLVPTGTCVYVEGM 107
V VGGW++T R KG F FLE+NDGSC N+Q I+++ A D+ V TG CV V G
Sbjct: 19 VHVGGWIRT-RRNAKG-FVFLELNDGSCLKNIQCIINEGSAAWDMLDGVNTGACVSVYGK 76
Query: 108 LKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVAR 167
L P G Q E++V+K+V G+ P +P+ K + + EFLR R RTN A+ R
Sbjct: 77 LV-PSPGRGQDWEIQVEKMVVHGLAAPEVFPLQKKRHSDEFLRTIAHLRVRTNKYGAIFR 135
Query: 168 IRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTT 209
IR A A H + K+GF YIHTPI+T SDCEGAGEMF+VTT
Sbjct: 136 IRAEAAQAIHNYFYKKGFYYIHTPILTGSDCEGAGEMFRVTT 177
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 299 FFARQAFLTVSGQLQVETYACAVSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEMAFSDLK 358
FF ++ LTVSGQL+ E A + VYTFGPTFRAE+S+T RH AEFWMVEPEMAF+DL+
Sbjct: 190 FFGKECSLTVSGQLEAECLAMGLGKVYTFGPTFRAENSNTPRHAAEFWMVEPEMAFADLQ 249
>sp|A5HZE1|SYN_CLOBH Asparagine--tRNA ligase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=asnS PE=3 SV=1
Length = 463
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Query: 28 DRVLIKSILTRPDGGAGLAGRQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDK 87
D L+KS+ + ++V++ GWV+T R+ +FAF+EVNDGS N+QVI++
Sbjct: 2 DITLVKSLYRETEKHMD---KEVKINGWVRTVRDSK--NFAFVEVNDGSFFKNVQVILES 56
Query: 88 DVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLT 145
+ + +L +P T V VEG+++ P KQ E++ ++ G YP+ K + T
Sbjct: 57 SLENFKELCKMPISTSVEVEGIVQ-PTPNAKQPFEIKATRISIEGK-SSTDYPLQKKRHT 114
Query: 146 LEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMF 205
E+LR RPR+N +AV R+R+ AYA H F Q++GF+Y +TPIIT SDCEGAGEMF
Sbjct: 115 FEYLRTIAHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMF 174
Query: 206 QVTTL 210
Q+TT+
Sbjct: 175 QLTTM 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,596,486
Number of Sequences: 539616
Number of extensions: 5632755
Number of successful extensions: 19377
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 558
Number of HSP's that attempted gapping in prelim test: 17844
Number of HSP's gapped (non-prelim): 1467
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)