Query 018231
Match_columns 359
No_of_seqs 302 out of 2903
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 11:59:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018231.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018231hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 3.1E-47 1.1E-51 358.6 19.7 300 24-323 32-332 (490)
2 1rv3_A Serine hydroxymethyltra 100.0 3.7E-40 1.3E-44 323.9 23.9 304 19-322 17-321 (483)
3 2a7v_A Serine hydroxymethyltra 100.0 7.9E-40 2.7E-44 320.1 22.3 298 25-322 33-331 (490)
4 3h7f_A Serine hydroxymethyltra 100.0 5.6E-32 1.9E-36 263.2 23.6 277 22-321 21-297 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 7.8E-32 2.7E-36 258.8 23.3 273 26-321 5-277 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 7.3E-31 2.5E-35 252.1 20.7 280 21-321 3-284 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 3.5E-30 1.2E-34 247.7 21.9 279 21-321 7-285 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 9.6E-30 3.3E-34 243.3 22.1 272 27-321 4-275 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 5.4E-29 1.8E-33 238.3 22.3 271 29-321 6-276 (407)
10 3nnk_A Ureidoglycine-glyoxylat 99.9 6.5E-25 2.2E-29 210.0 19.8 249 47-322 13-286 (411)
11 3zrp_A Serine-pyruvate aminotr 99.9 4.4E-25 1.5E-29 209.0 18.1 247 49-322 4-262 (384)
12 3f0h_A Aminotransferase; RER07 99.9 8.7E-25 3E-29 206.8 18.6 258 47-331 19-282 (376)
13 3isl_A Purine catabolism prote 99.9 2.8E-24 9.4E-29 206.0 21.5 249 47-322 11-286 (416)
14 2huf_A Alanine glyoxylate amin 99.9 2.4E-24 8.3E-29 204.9 19.7 247 48-321 20-278 (393)
15 3lvm_A Cysteine desulfurase; s 99.9 9.7E-25 3.3E-29 209.8 17.1 245 45-322 20-281 (423)
16 1vjo_A Alanine--glyoxylate ami 99.9 3.4E-24 1.2E-28 204.0 20.6 233 48-321 35-290 (393)
17 2dr1_A PH1308 protein, 386AA l 99.9 2.6E-24 8.8E-29 204.0 18.8 244 49-322 22-276 (386)
18 3kgw_A Alanine-glyoxylate amin 99.9 4E-24 1.4E-28 203.0 20.0 249 47-322 23-283 (393)
19 1iug_A Putative aspartate amin 99.9 9.8E-25 3.3E-29 204.3 14.1 241 49-322 3-249 (352)
20 2z9v_A Aspartate aminotransfer 99.9 3.2E-24 1.1E-28 204.0 17.9 246 49-322 10-266 (392)
21 4hvk_A Probable cysteine desul 99.9 1.3E-24 4.5E-29 205.2 14.8 234 54-320 8-251 (382)
22 1kmj_A Selenocysteine lyase; p 99.9 4.6E-24 1.6E-28 203.5 17.6 256 48-321 24-296 (406)
23 2ch1_A 3-hydroxykynurenine tra 99.9 1.5E-23 5.2E-28 199.6 20.9 247 48-321 19-277 (396)
24 3cai_A Possible aminotransfera 99.9 3.8E-24 1.3E-28 204.6 15.0 242 48-321 27-284 (406)
25 2yrr_A Aminotransferase, class 99.9 4.1E-24 1.4E-28 199.8 14.6 245 49-322 2-251 (353)
26 4eb5_A Probable cysteine desul 99.9 6.9E-24 2.3E-28 200.8 14.8 234 55-321 9-252 (382)
27 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 4.7E-24 1.6E-28 201.3 13.5 239 47-321 8-266 (371)
28 1m32_A 2-aminoethylphosphonate 99.9 2.1E-23 7.1E-28 196.0 17.5 248 48-322 5-261 (366)
29 1t3i_A Probable cysteine desul 99.9 2E-23 6.9E-28 200.1 17.5 240 48-321 29-300 (420)
30 1elu_A L-cysteine/L-cystine C- 99.9 2.2E-23 7.7E-28 197.8 17.0 258 48-322 17-292 (390)
31 3qm2_A Phosphoserine aminotran 99.9 3.8E-25 1.3E-29 210.3 4.3 271 47-345 27-306 (386)
32 3vax_A Putative uncharacterize 99.9 4.8E-24 1.7E-28 203.3 12.0 242 47-321 20-280 (400)
33 3f9t_A TDC, L-tyrosine decarbo 99.9 1.1E-22 3.8E-27 193.0 21.3 203 49-273 33-262 (397)
34 2bkw_A Alanine-glyoxylate amin 99.9 7.3E-23 2.5E-27 193.9 19.7 247 47-321 5-276 (385)
35 1eg5_A Aminotransferase; PLP-d 99.9 4.2E-23 1.4E-27 195.4 17.8 239 50-320 4-255 (384)
36 1gd9_A Aspartate aminotransfer 99.9 3.7E-23 1.3E-27 196.7 16.4 259 24-318 4-280 (389)
37 3ffr_A Phosphoserine aminotran 99.9 3.2E-23 1.1E-27 194.6 14.5 248 47-322 4-262 (362)
38 3e77_A Phosphoserine aminotran 99.9 4.8E-24 1.6E-28 201.8 8.7 260 53-340 19-286 (377)
39 3a9z_A Selenocysteine lyase; P 99.9 2.3E-23 8E-28 200.9 12.5 249 47-321 18-302 (432)
40 3m5u_A Phosphoserine aminotran 99.9 2.9E-23 9.8E-28 195.7 12.6 262 47-343 5-277 (361)
41 1b5p_A Protein (aspartate amin 99.9 2.7E-22 9.1E-27 190.9 18.3 226 24-272 5-250 (385)
42 3e9k_A Kynureninase; kynurenin 99.9 1.1E-23 3.7E-28 205.6 8.7 224 96-333 115-362 (465)
43 3h14_A Aminotransferase, class 99.9 5.4E-22 1.8E-26 188.9 18.1 245 34-317 19-276 (391)
44 1u08_A Hypothetical aminotrans 99.9 3.1E-22 1.1E-26 190.2 16.2 260 23-319 8-284 (386)
45 1yiz_A Kynurenine aminotransfe 99.9 6.5E-22 2.2E-26 190.7 17.8 262 23-318 15-302 (429)
46 1o4s_A Aspartate aminotransfer 99.9 2E-22 6.9E-27 192.0 13.5 230 22-272 13-262 (389)
47 2o0r_A RV0858C (N-succinyldiam 99.9 3E-22 1E-26 192.1 14.4 230 23-272 3-249 (411)
48 1v2d_A Glutamine aminotransfer 99.9 2.2E-22 7.6E-27 190.9 12.9 255 23-319 3-270 (381)
49 3dzz_A Putative pyridoxal 5'-p 99.9 4.5E-22 1.5E-26 189.0 14.9 238 47-318 28-283 (391)
50 2z61_A Probable aspartate amin 99.9 6.1E-22 2.1E-26 187.1 15.6 228 46-318 29-269 (370)
51 3ffh_A Histidinol-phosphate am 99.9 2.1E-21 7.1E-26 182.9 18.9 249 23-317 6-269 (363)
52 1j32_A Aspartate aminotransfer 99.9 2.3E-21 7.8E-26 184.3 18.3 208 46-272 30-253 (388)
53 3l8a_A METC, putative aminotra 99.9 7.1E-22 2.4E-26 190.2 14.8 239 46-318 61-317 (421)
54 3fvs_A Kynurenine--oxoglutarat 99.9 6.5E-22 2.2E-26 190.1 14.1 265 23-318 6-294 (422)
55 4dq6_A Putative pyridoxal phos 99.9 1.1E-21 3.8E-26 186.3 15.2 251 30-318 17-287 (391)
56 3get_A Histidinol-phosphate am 99.9 7.4E-22 2.5E-26 186.1 13.7 226 46-317 30-271 (365)
57 3kki_A CAI-1 autoinducer synth 99.9 2.6E-21 9E-26 185.4 17.6 254 28-322 24-306 (409)
58 3jtx_A Aminotransferase; NP_28 99.9 1.8E-21 6E-26 185.4 16.3 254 26-317 5-291 (396)
59 2w8t_A SPT, serine palmitoyltr 99.9 3E-21 1E-25 186.3 17.9 233 48-321 66-313 (427)
60 2dou_A Probable N-succinyldiam 99.9 1.1E-21 3.9E-26 185.7 14.7 253 30-318 4-277 (376)
61 1xi9_A Putative transaminase; 99.9 5.8E-22 2E-26 189.8 12.7 230 23-272 12-263 (406)
62 2c0r_A PSAT, phosphoserine ami 99.9 4.7E-22 1.6E-26 187.4 11.6 247 47-322 4-258 (362)
63 1fc4_A 2-amino-3-ketobutyrate 99.9 1.4E-21 4.7E-26 186.6 14.6 235 47-321 46-297 (401)
64 1c7n_A Cystalysin; transferase 99.9 2.5E-21 8.5E-26 184.7 16.0 238 47-318 32-287 (399)
65 3ly1_A Putative histidinol-pho 99.9 5.3E-21 1.8E-25 179.3 18.0 225 47-317 17-257 (354)
66 1qz9_A Kynureninase; kynurenin 99.9 9.8E-22 3.3E-26 188.4 12.7 248 48-321 29-300 (416)
67 3b46_A Aminotransferase BNA3; 99.9 1.3E-21 4.4E-26 190.0 13.3 258 30-319 33-323 (447)
68 3tqx_A 2-amino-3-ketobutyrate 99.9 2.5E-21 8.6E-26 184.3 14.9 232 48-319 45-293 (399)
69 2x5d_A Probable aminotransfera 99.9 3.2E-21 1.1E-25 185.0 15.2 261 23-318 10-292 (412)
70 3euc_A Histidinol-phosphate am 99.9 1.3E-20 4.5E-25 177.6 19.0 229 47-318 31-271 (367)
71 3vp6_A Glutamate decarboxylase 99.9 1.1E-20 3.6E-25 186.6 18.9 174 87-273 130-332 (511)
72 3kax_A Aminotransferase, class 99.9 2.2E-21 7.5E-26 183.7 13.4 237 47-318 25-279 (383)
73 2dgk_A GAD-beta, GADB, glutama 99.9 1.1E-20 3.7E-25 183.7 18.6 197 57-273 53-278 (452)
74 1b9h_A AHBA synthase, protein 99.9 8.5E-21 2.9E-25 180.4 17.4 186 59-273 16-203 (388)
75 1d2f_A MALY protein; aminotran 99.9 1.1E-20 3.8E-25 179.7 18.0 237 47-318 29-283 (390)
76 3ele_A Amino transferase; RER0 99.9 4.4E-21 1.5E-25 182.9 15.2 209 46-273 35-265 (398)
77 2gb3_A Aspartate aminotransfer 99.9 3E-21 1E-25 185.1 13.6 235 46-317 43-290 (409)
78 3e2y_A Kynurenine-oxoglutarate 99.9 2.4E-21 8.2E-26 185.3 12.8 259 26-318 4-287 (410)
79 2zc0_A Alanine glyoxylate tran 99.9 2E-20 6.7E-25 178.9 19.0 261 22-318 6-293 (407)
80 3mad_A Sphingosine-1-phosphate 99.9 1.6E-20 5.5E-25 185.5 18.9 207 88-321 135-372 (514)
81 3a2b_A Serine palmitoyltransfe 99.8 5.7E-21 2E-25 182.2 14.4 233 47-320 44-291 (398)
82 2o1b_A Aminotransferase, class 99.8 1.9E-21 6.6E-26 186.2 11.0 260 24-318 23-300 (404)
83 3hbx_A GAD 1, glutamate decarb 99.8 2.2E-20 7.6E-25 184.0 18.7 199 56-273 66-293 (502)
84 3g0t_A Putative aminotransfera 99.8 1.2E-20 4.1E-25 182.1 16.4 210 46-273 44-277 (437)
85 3ju7_A Putative PLP-dependent 99.8 7.7E-21 2.6E-25 180.6 14.7 196 48-273 4-206 (377)
86 3p1t_A Putative histidinol-pho 99.8 3E-20 1E-24 172.9 18.3 222 45-318 15-243 (337)
87 3hvy_A Cystathionine beta-lyas 99.8 6.7E-21 2.3E-25 183.3 13.9 225 29-272 15-261 (427)
88 1bs0_A Protein (8-amino-7-oxon 99.8 1.9E-20 6.4E-25 177.7 16.8 233 47-321 40-285 (384)
89 3cq5_A Histidinol-phosphate am 99.8 7.9E-20 2.7E-24 172.7 20.8 234 48-318 32-276 (369)
90 3nra_A Aspartate aminotransfer 99.8 6.4E-21 2.2E-25 182.1 13.3 207 48-272 41-269 (407)
91 3ezs_A Aminotransferase ASPB; 99.8 3.1E-20 1.1E-24 175.6 17.8 248 31-318 5-278 (376)
92 3dyd_A Tyrosine aminotransfera 99.8 5.5E-21 1.9E-25 184.4 12.6 239 47-318 55-316 (427)
93 3dr4_A Putative perosamine syn 99.8 1.1E-20 3.6E-25 180.0 14.3 197 47-273 23-221 (391)
94 3mc6_A Sphingosine-1-phosphate 99.8 1.7E-20 5.9E-25 184.4 15.8 235 58-322 76-341 (497)
95 1w23_A Phosphoserine aminotran 99.8 1.9E-21 6.5E-26 182.7 8.6 241 47-322 3-257 (360)
96 3ke3_A Putative serine-pyruvat 99.8 1.2E-20 4.1E-25 179.3 14.2 216 91-322 34-271 (379)
97 3i16_A Aluminum resistance pro 99.8 1.1E-20 3.6E-25 181.9 13.8 206 47-272 35-261 (427)
98 3fdb_A Beta C-S lyase, putativ 99.8 6.5E-20 2.2E-24 173.3 18.3 232 46-318 23-271 (377)
99 3jzl_A Putative cystathionine 99.8 1.1E-20 3.7E-25 181.2 11.4 196 60-272 32-244 (409)
100 1o69_A Aminotransferase; struc 99.8 1.2E-19 4E-24 173.2 18.0 186 57-272 9-198 (394)
101 1svv_A Threonine aldolase; str 99.8 7.4E-20 2.5E-24 171.4 15.7 201 47-273 14-231 (359)
102 3aow_A Putative uncharacterize 99.8 5.5E-20 1.9E-24 178.6 14.8 234 17-272 48-304 (448)
103 3nyt_A Aminotransferase WBPE; 99.8 6.9E-21 2.3E-25 179.9 7.9 191 49-273 5-201 (367)
104 2fnu_A Aminotransferase; prote 99.8 6.6E-20 2.3E-24 173.0 14.1 184 54-271 7-195 (375)
105 2z67_A O-phosphoseryl-tRNA(SEC 99.8 5.9E-21 2E-25 185.9 6.6 169 90-273 131-314 (456)
106 2aeu_A Hypothetical protein MJ 99.8 3.5E-19 1.2E-23 168.9 18.7 217 47-319 29-254 (374)
107 3tcm_A Alanine aminotransferas 99.8 4.1E-19 1.4E-23 174.8 19.6 241 45-317 94-366 (500)
108 1bw0_A TAT, protein (tyrosine 99.8 6.8E-20 2.3E-24 175.8 13.3 240 47-318 34-305 (416)
109 2okj_A Glutamate decarboxylase 99.8 8.6E-19 2.9E-23 172.7 21.3 173 88-273 128-329 (504)
110 3frk_A QDTB; aminotransferase, 99.8 1.9E-20 6.5E-25 177.1 8.7 191 49-273 6-202 (373)
111 1vp4_A Aminotransferase, putat 99.8 8.6E-21 3E-25 182.8 6.2 258 23-319 21-307 (425)
112 3b8x_A WBDK, pyridoxamine 5-ph 99.8 7.8E-19 2.7E-23 167.1 19.7 192 49-272 4-204 (390)
113 2zyj_A Alpha-aminodipate amino 99.8 2E-20 6.7E-25 178.5 8.5 226 19-272 6-253 (397)
114 2vyc_A Biodegradative arginine 99.8 1.4E-19 4.7E-24 185.8 15.2 203 97-322 210-441 (755)
115 2jis_A Cysteine sulfinic acid 99.8 3.1E-19 1.1E-23 176.3 17.2 171 88-273 144-343 (515)
116 1wyu_B Glycine dehydrogenase s 99.8 5E-19 1.7E-23 173.1 17.6 202 49-274 69-288 (474)
117 3ht4_A Aluminum resistance pro 99.8 6.6E-20 2.2E-24 177.0 11.0 170 94-272 67-250 (431)
118 1iay_A ACC synthase 2, 1-amino 99.8 5.7E-19 1.9E-23 170.1 17.5 242 47-317 37-313 (428)
119 2rfv_A Methionine gamma-lyase; 99.8 5.4E-20 1.8E-24 175.8 10.2 188 96-319 68-261 (398)
120 1c4k_A Protein (ornithine deca 99.8 7.1E-20 2.4E-24 186.6 11.5 207 97-321 178-414 (730)
121 3rq1_A Aminotransferase class 99.8 2.9E-19 1E-23 171.5 15.1 223 28-270 15-276 (418)
122 4f4e_A Aromatic-amino-acid ami 99.8 2.4E-19 8.3E-24 172.4 14.4 242 11-270 13-283 (420)
123 2x3l_A ORN/Lys/Arg decarboxyla 99.8 2.3E-20 7.8E-25 181.2 6.9 194 97-322 62-264 (446)
124 2oga_A Transaminase; PLP-depen 99.8 2.4E-19 8.1E-24 171.3 13.9 193 47-272 31-228 (399)
125 2bwn_A 5-aminolevulinate synth 99.8 6.1E-19 2.1E-23 168.3 16.7 232 49-322 49-298 (401)
126 1lc5_A COBD, L-threonine-O-3-p 99.8 9E-19 3.1E-23 165.0 17.2 224 47-317 25-261 (364)
127 3hdo_A Histidinol-phosphate am 99.8 5.3E-19 1.8E-23 166.3 15.6 221 47-318 27-259 (360)
128 3qgu_A LL-diaminopimelate amin 99.8 5.5E-19 1.9E-23 171.3 15.7 204 47-274 70-300 (449)
129 2c81_A Glutamine-2-deoxy-scyll 99.8 3.3E-19 1.1E-23 171.3 13.9 194 56-272 12-206 (418)
130 3op7_A Aminotransferase class 99.8 3.6E-19 1.2E-23 168.2 13.9 192 97-318 68-269 (375)
131 2r2n_A Kynurenine/alpha-aminoa 99.8 1.1E-18 3.8E-23 168.1 17.5 260 19-319 3-310 (425)
132 4e1o_A HDC, histidine decarbox 99.8 5.1E-19 1.7E-23 173.3 15.2 199 57-273 90-325 (481)
133 1pff_A Methionine gamma-lyase; 99.8 2.3E-19 7.8E-24 166.8 12.0 188 97-319 3-196 (331)
134 1js3_A DDC;, DOPA decarboxylas 99.8 2.7E-19 9.1E-24 175.5 12.8 197 58-273 86-319 (486)
135 1mdo_A ARNB aminotransferase; 99.8 5.9E-19 2E-23 167.8 14.8 190 47-272 9-202 (393)
136 1e5e_A MGL, methionine gamma-l 99.8 4E-19 1.4E-23 170.3 13.6 185 97-318 67-259 (404)
137 1gc0_A Methionine gamma-lyase; 99.8 2.9E-19 9.8E-24 170.9 12.1 155 97-273 70-229 (398)
138 1v72_A Aldolase; PLP-dependent 99.8 4.9E-19 1.7E-23 165.7 13.2 200 47-273 8-227 (356)
139 3uwc_A Nucleotide-sugar aminot 99.8 4.1E-19 1.4E-23 167.7 12.6 191 47-273 7-203 (374)
140 3ei9_A LL-diaminopimelate amin 99.8 1.1E-18 3.8E-23 168.3 15.6 213 47-273 57-287 (432)
141 2qma_A Diaminobutyrate-pyruvat 99.8 1.1E-18 3.8E-23 171.6 15.5 197 57-273 111-341 (497)
142 3ftb_A Histidinol-phosphate am 99.8 2.5E-18 8.6E-23 161.4 17.3 222 46-317 26-260 (361)
143 3n75_A LDC, lysine decarboxyla 99.8 1.7E-19 5.9E-24 182.5 9.8 195 97-321 200-418 (715)
144 3piu_A 1-aminocyclopropane-1-c 99.8 2.7E-18 9.1E-23 165.8 17.5 212 48-273 40-290 (435)
145 3k40_A Aromatic-L-amino-acid d 99.8 3.7E-19 1.3E-23 174.1 11.3 175 86-273 107-318 (475)
146 1qgn_A Protein (cystathionine 99.8 1.1E-18 3.9E-23 168.9 14.4 154 97-272 119-278 (445)
147 3b1d_A Betac-S lyase; HET: PLP 99.7 1.1E-20 3.9E-25 179.9 0.0 238 47-318 32-287 (392)
148 3t18_A Aminotransferase class 99.8 7.7E-19 2.6E-23 168.3 12.8 227 23-270 8-275 (413)
149 1fg7_A Histidinol phosphate am 99.8 1.4E-18 4.9E-23 163.5 14.0 217 47-317 30-258 (356)
150 2po3_A 4-dehydrase; external a 99.8 2E-18 6.8E-23 166.2 15.3 189 50-272 20-214 (424)
151 3ihj_A Alanine aminotransferas 99.8 2.8E-18 9.5E-23 168.8 16.5 197 58-270 102-331 (498)
152 1jg8_A L-ALLO-threonine aldola 99.8 7.7E-19 2.6E-23 164.1 11.8 200 47-272 4-217 (347)
153 3if2_A Aminotransferase; YP_26 99.8 1.7E-18 5.8E-23 167.5 14.3 218 46-272 31-291 (444)
154 3asa_A LL-diaminopimelate amin 99.8 3.1E-18 1.1E-22 163.5 15.3 240 47-319 34-292 (400)
155 2fq6_A Cystathionine beta-lyas 99.8 8.2E-19 2.8E-23 168.6 11.1 155 97-273 87-248 (415)
156 1cs1_A CGS, protein (cystathio 99.8 1.4E-18 4.7E-23 165.3 11.8 154 97-272 57-215 (386)
157 3ez1_A Aminotransferase MOCR f 99.8 1.5E-18 5.1E-23 166.9 11.3 222 25-272 5-268 (423)
158 3cog_A Cystathionine gamma-lya 99.8 1.6E-18 5.3E-23 166.1 11.2 153 97-272 72-230 (403)
159 2fyf_A PSAT, phosphoserine ami 99.8 1.9E-18 6.4E-23 165.0 11.6 240 47-322 40-293 (398)
160 3pj0_A LMO0305 protein; struct 99.8 1.4E-18 4.7E-23 163.2 9.6 197 47-272 14-222 (359)
161 3fsl_A Aromatic-amino-acid ami 99.8 7.1E-18 2.4E-22 160.5 14.3 228 27-271 5-262 (397)
162 1yaa_A Aspartate aminotransfer 99.8 7.7E-18 2.6E-22 161.3 14.4 260 25-319 6-313 (412)
163 1ajs_A Aspartate aminotransfer 99.7 2E-17 7E-22 158.2 16.8 225 24-270 6-272 (412)
164 3qhx_A Cystathionine gamma-syn 99.7 4.3E-18 1.5E-22 162.5 11.6 154 97-272 71-229 (392)
165 2x5f_A Aspartate_tyrosine_phen 99.7 2.7E-18 9.3E-23 165.4 10.2 238 46-317 47-324 (430)
166 1n8p_A Cystathionine gamma-lya 99.7 2.3E-18 7.8E-23 164.4 9.5 152 97-272 60-220 (393)
167 1ibj_A CBL, cystathionine beta 99.7 7.9E-18 2.7E-22 164.0 13.4 156 94-272 135-295 (464)
168 1vef_A Acetylornithine/acetyl- 99.7 1.4E-17 4.9E-22 158.4 14.3 234 48-321 47-303 (395)
169 2cb1_A O-acetyl homoserine sul 99.7 1.9E-17 6.6E-22 158.9 15.2 153 97-272 61-218 (412)
170 3g7q_A Valine-pyruvate aminotr 99.7 4.2E-18 1.5E-22 163.1 10.4 226 34-272 17-265 (417)
171 3k7y_A Aspartate aminotransfer 99.7 1.2E-16 4E-21 153.1 20.1 225 26-270 7-263 (405)
172 3ndn_A O-succinylhomoserine su 99.7 6.5E-18 2.2E-22 162.4 11.3 155 97-273 86-245 (414)
173 1s0a_A Adenosylmethionine-8-am 99.7 1.4E-16 4.8E-21 153.4 20.7 246 48-322 45-330 (429)
174 3ruy_A Ornithine aminotransfer 99.7 1.9E-17 6.7E-22 157.4 13.9 223 58-321 53-301 (392)
175 1uu1_A Histidinol-phosphate am 99.7 1.8E-17 6.3E-22 154.3 13.5 215 47-318 20-247 (335)
176 3ri6_A O-acetylhomoserine sulf 99.7 8E-18 2.7E-22 162.3 11.0 155 97-273 87-246 (430)
177 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 6.4E-17 2.2E-21 156.4 17.3 188 54-273 37-235 (437)
178 3fkd_A L-threonine-O-3-phospha 99.7 5.4E-17 1.8E-21 151.9 16.0 217 46-318 15-242 (350)
179 2q7w_A Aspartate aminotransfer 99.7 5.1E-17 1.8E-21 154.4 15.7 204 47-270 27-260 (396)
180 1ax4_A Tryptophanase; tryptoph 99.7 4.7E-17 1.6E-21 158.4 15.7 187 60-271 55-279 (467)
181 3lws_A Aromatic amino acid bet 99.7 1.6E-17 5.5E-22 155.8 11.7 197 50-272 14-220 (357)
182 3acz_A Methionine gamma-lyase; 99.7 9.3E-18 3.2E-22 159.9 10.2 154 97-272 64-222 (389)
183 2ez2_A Beta-tyrosinase, tyrosi 99.7 8.7E-17 3E-21 156.1 17.1 192 49-272 45-271 (456)
184 3meb_A Aspartate aminotransfer 99.7 1.8E-16 6.3E-21 153.7 19.4 235 11-270 13-293 (448)
185 2eh6_A Acoat, acetylornithine 99.7 1.2E-16 4.3E-21 150.7 17.7 222 58-320 45-289 (375)
186 3d6k_A Putative aminotransfera 99.7 1.1E-17 3.8E-22 160.9 10.1 225 24-272 11-273 (422)
187 7aat_A Aspartate aminotransfer 99.7 1.3E-16 4.5E-21 152.0 17.3 224 29-271 9-265 (401)
188 1wyu_A Glycine dehydrogenase ( 99.7 2.2E-17 7.4E-22 159.8 11.8 165 88-274 104-278 (438)
189 2ay1_A Aroat, aromatic amino a 99.7 6.1E-17 2.1E-21 153.9 14.5 201 47-270 27-257 (394)
190 3ppl_A Aspartate aminotransfer 99.7 2.7E-17 9.2E-22 158.4 10.9 170 83-272 73-275 (427)
191 3f6t_A Aspartate aminotransfer 99.7 1.1E-16 3.8E-21 158.6 15.4 205 48-273 105-330 (533)
192 2ctz_A O-acetyl-L-homoserine s 99.7 4.3E-17 1.5E-21 157.0 11.5 154 97-271 63-221 (421)
193 4eu1_A Mitochondrial aspartate 99.7 9.6E-17 3.3E-21 153.6 13.6 230 20-272 13-276 (409)
194 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 8.2E-18 2.8E-22 159.6 6.0 167 95-273 120-300 (501)
195 2eo5_A 419AA long hypothetical 99.7 6E-16 2.1E-20 148.7 18.3 239 48-321 44-329 (419)
196 3nx3_A Acoat, acetylornithine 99.7 4.2E-16 1.4E-20 148.3 16.8 234 47-322 37-299 (395)
197 2oqx_A Tryptophanase; lyase, p 99.7 5.8E-17 2E-21 157.7 10.7 189 60-273 53-281 (467)
198 1sff_A 4-aminobutyrate aminotr 99.7 7.9E-16 2.7E-20 147.8 18.5 236 57-322 57-318 (426)
199 1z7d_A Ornithine aminotransfer 99.7 8.3E-16 2.8E-20 148.5 18.6 224 58-322 82-332 (433)
200 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 3.5E-17 1.2E-21 156.8 8.1 173 90-273 96-282 (450)
201 2zy4_A L-aspartate beta-decarb 99.7 1.3E-16 4.4E-21 158.5 12.3 226 26-273 73-332 (546)
202 3n5m_A Adenosylmethionine-8-am 99.7 4.9E-15 1.7E-19 143.7 23.3 242 58-331 66-350 (452)
203 3gju_A Putative aminotransfera 99.7 1.5E-15 5.1E-20 147.8 19.7 246 58-331 68-357 (460)
204 4adb_A Succinylornithine trans 99.7 4.3E-16 1.5E-20 148.6 14.8 222 58-322 56-302 (406)
205 3nmy_A Xometc, cystathionine g 99.7 9.1E-17 3.1E-21 153.6 9.8 155 97-273 72-232 (400)
206 2oat_A Ornithine aminotransfer 99.7 1.9E-15 6.5E-20 146.3 18.8 233 48-322 78-343 (439)
207 3dxv_A Alpha-amino-epsilon-cap 99.7 1.1E-15 3.9E-20 147.5 17.0 242 47-322 44-319 (439)
208 3a8u_X Omega-amino acid--pyruv 99.7 1.6E-15 5.4E-20 147.0 17.6 234 58-322 67-348 (449)
209 3i4j_A Aminotransferase, class 99.7 1.2E-15 4.1E-20 146.9 15.9 236 58-322 46-316 (430)
210 3tfu_A Adenosylmethionine-8-am 99.6 2.9E-15 1E-19 145.7 17.4 242 58-329 92-366 (457)
211 3l44_A Glutamate-1-semialdehyd 99.6 3.6E-15 1.2E-19 143.8 17.8 240 47-329 56-330 (434)
212 4a6r_A Omega transaminase; tra 99.6 6.2E-16 2.1E-20 150.4 11.7 243 58-329 67-349 (459)
213 3i5t_A Aminotransferase; pyrid 99.6 1.5E-14 5.1E-19 141.4 21.5 243 58-331 71-358 (476)
214 3dod_A Adenosylmethionine-8-am 99.6 6.7E-15 2.3E-19 142.7 18.4 242 58-331 61-347 (448)
215 2ord_A Acoat, acetylornithine 99.6 9.2E-15 3.1E-19 139.1 18.5 213 58-321 57-300 (397)
216 3hmu_A Aminotransferase, class 99.6 3.5E-15 1.2E-19 145.7 15.4 241 58-329 72-352 (472)
217 2pb2_A Acetylornithine/succiny 99.6 3.6E-15 1.2E-19 143.4 14.3 232 48-322 59-320 (420)
218 3fq8_A Glutamate-1-semialdehyd 99.6 1.6E-14 5.6E-19 138.9 18.1 239 47-328 53-326 (427)
219 4e77_A Glutamate-1-semialdehyd 99.6 2.2E-14 7.5E-19 138.1 19.0 240 47-329 54-328 (429)
220 1zod_A DGD, 2,2-dialkylglycine 99.6 2.1E-14 7.2E-19 138.3 18.4 233 58-322 60-324 (433)
221 3k28_A Glutamate-1-semialdehyd 99.6 2.3E-14 7.7E-19 138.1 15.8 231 47-320 54-319 (429)
222 2epj_A Glutamate-1-semialdehyd 99.6 5.8E-14 2E-18 135.3 18.6 233 48-322 58-324 (434)
223 4ffc_A 4-aminobutyrate aminotr 99.6 6.7E-14 2.3E-18 135.9 18.2 244 58-330 81-352 (453)
224 2cy8_A D-phgat, D-phenylglycin 99.6 4.6E-14 1.6E-18 136.8 17.0 230 48-319 59-322 (453)
225 2e7u_A Glutamate-1-semialdehyd 99.6 1.6E-13 5.3E-18 131.9 19.0 230 48-321 54-318 (424)
226 3oks_A 4-aminobutyrate transam 99.6 1.3E-13 4.4E-18 133.8 18.3 244 58-330 78-354 (451)
227 4h51_A Aspartate aminotransfer 99.6 5.8E-14 2E-18 134.7 15.4 223 31-273 29-282 (420)
228 2cjg_A L-lysine-epsilon aminot 99.5 8.8E-14 3E-18 134.9 14.9 230 58-322 71-351 (449)
229 3bwn_A AT1G70560, L-tryptophan 99.5 2.7E-14 9.3E-19 136.0 7.2 222 47-318 23-265 (391)
230 4ao9_A Beta-phenylalanine amin 99.4 5.8E-12 2E-16 121.6 17.6 231 58-332 104-351 (454)
231 2hox_A ALLIIN lyase 1; cystein 99.4 5.5E-14 1.9E-18 135.5 2.5 190 47-272 57-267 (427)
232 2yky_A Beta-transaminase; tran 99.1 2.8E-14 9.4E-19 138.6 0.0 241 47-331 101-364 (465)
233 1ohv_A 4-aminobutyrate aminotr 99.3 1.3E-11 4.4E-16 120.4 14.0 233 58-322 80-374 (472)
234 4atq_A 4-aminobutyrate transam 99.2 9.8E-10 3.3E-14 106.3 20.7 246 58-332 81-355 (456)
235 4e3q_A Pyruvate transaminase; 98.9 4.8E-08 1.6E-12 94.9 16.7 266 58-355 84-395 (473)
236 4a0g_A Adenosylmethionine-8-am 98.7 9.2E-08 3.2E-12 99.0 13.4 129 185-330 577-729 (831)
237 4gqr_A Pancreatic alpha-amylas 50.3 11 0.00038 35.5 3.7 28 204-231 71-98 (496)
238 3qvo_A NMRA family protein; st 47.3 1.1E+02 0.0037 25.3 9.3 90 116-224 26-117 (236)
239 2yxb_A Coenzyme B12-dependent 45.8 37 0.0013 26.9 5.6 42 182-223 56-97 (161)
240 1ht6_A AMY1, alpha-amylase iso 43.7 17 0.00059 33.6 3.8 28 204-231 63-90 (405)
241 1lwj_A 4-alpha-glucanotransfer 42.5 19 0.00064 33.8 3.9 26 206-231 66-91 (441)
242 1g94_A Alpha-amylase; beta-alp 41.8 18 0.00062 33.9 3.7 28 204-231 59-86 (448)
243 3bh4_A Alpha-amylase; calcium, 41.7 20 0.00067 34.1 3.9 28 204-231 73-100 (483)
244 3noy_A 4-hydroxy-3-methylbut-2 41.3 24 0.00081 32.1 4.1 50 180-230 91-140 (366)
245 1ud2_A Amylase, alpha-amylase; 40.9 20 0.0007 33.9 3.9 27 205-231 76-102 (480)
246 1wpc_A Glucan 1,4-alpha-maltoh 40.9 20 0.0007 34.0 3.9 27 205-231 78-104 (485)
247 1hvx_A Alpha-amylase; hydrolas 40.7 21 0.0007 34.3 3.9 28 204-231 76-103 (515)
248 1y80_A Predicted cobalamin bin 40.5 64 0.0022 26.5 6.6 51 181-231 125-179 (210)
249 4aie_A Glucan 1,6-alpha-glucos 39.2 22 0.00074 34.1 3.9 26 206-231 76-101 (549)
250 1mxg_A Alpha amylase; hyperthe 39.2 23 0.00079 33.2 3.9 28 204-231 81-108 (435)
251 1gcy_A Glucan 1,4-alpha-maltot 39.0 24 0.00081 34.0 4.1 28 204-231 87-114 (527)
252 1vc3_B L-aspartate-alpha-decar 38.4 20 0.00068 25.9 2.5 12 132-143 54-65 (96)
253 2rdx_A Mandelate racemase/muco 38.2 65 0.0022 29.3 6.8 50 180-229 245-294 (379)
254 2guy_A Alpha-amylase A; (beta- 38.2 24 0.00081 33.4 3.9 28 204-231 92-119 (478)
255 3plx_B Aspartate 1-decarboxyla 38.2 25 0.00087 25.6 3.1 14 130-143 51-64 (102)
256 2lbw_A H/ACA ribonucleoprotein 36.8 83 0.0029 23.5 6.1 44 184-228 25-68 (121)
257 1sjd_A N-acylamino acid racema 36.2 74 0.0025 28.8 6.8 48 181-228 242-289 (368)
258 1wza_A Alpha-amylase A; hydrol 35.7 23 0.00079 33.6 3.4 26 206-231 78-103 (488)
259 3i4k_A Muconate lactonizing en 35.1 1E+02 0.0034 28.2 7.5 50 180-229 253-302 (383)
260 2aaa_A Alpha-amylase; glycosid 34.6 27 0.00093 33.1 3.7 28 204-231 92-119 (484)
261 1pqh_A Aspartate 1-decarboxyla 34.4 40 0.0014 26.1 3.8 14 192-205 116-129 (143)
262 2ovl_A Putative racemase; stru 34.3 62 0.0021 29.4 6.0 51 180-230 250-300 (371)
263 2z1k_A (NEO)pullulanase; hydro 34.2 25 0.00085 33.2 3.3 26 206-231 93-118 (475)
264 1r0m_A N-acylamino acid racema 34.2 84 0.0029 28.5 6.9 48 181-228 248-295 (375)
265 3j21_Z 50S ribosomal protein L 33.5 98 0.0033 22.1 5.8 43 184-228 20-62 (99)
266 2dh2_A 4F2 cell-surface antige 33.5 27 0.00093 32.6 3.4 26 206-231 78-103 (424)
267 3q45_A Mandelate racemase/muco 33.4 88 0.003 28.4 6.8 51 180-230 243-293 (368)
268 3cpq_A 50S ribosomal protein L 33.1 97 0.0033 22.7 5.8 42 184-227 26-67 (110)
269 1jae_A Alpha-amylase; glycosid 32.7 23 0.00078 33.5 2.8 26 206-231 71-96 (471)
270 1xrs_B D-lysine 5,6-aminomutas 32.6 1.5E+02 0.0051 25.6 7.7 51 181-231 166-223 (262)
271 1zja_A Trehalulose synthase; s 32.5 33 0.0011 33.3 3.9 26 206-231 76-101 (557)
272 3bzy_B ESCU; auto cleavage pro 32.4 24 0.00082 24.8 2.1 20 212-231 29-48 (83)
273 2xzm_U Ribosomal protein L7AE 32.2 98 0.0034 23.4 5.8 51 184-235 29-80 (126)
274 3edf_A FSPCMD, cyclomaltodextr 32.0 33 0.0011 33.6 3.9 26 206-231 195-220 (601)
275 2fym_A Enolase; RNA degradosom 31.8 96 0.0033 28.9 6.9 50 180-229 319-368 (431)
276 1nu0_A Hypothetical protein YQ 31.6 90 0.0031 24.0 5.6 53 180-232 38-98 (138)
277 3dhu_A Alpha-amylase; structur 31.5 30 0.001 32.4 3.3 26 206-231 80-105 (449)
278 3qtp_A Enolase 1; glycolysis, 31.2 1.1E+02 0.0038 28.7 7.0 46 183-228 333-378 (441)
279 1qho_A Alpha-amylase; glycosid 31.2 34 0.0012 34.1 3.9 28 204-231 102-129 (686)
280 2wc7_A Alpha amylase, catalyti 30.9 25 0.00086 33.3 2.8 26 206-231 99-124 (488)
281 1cyg_A Cyclodextrin glucanotra 30.9 35 0.0012 34.0 3.9 28 204-231 106-133 (680)
282 1d3c_A Cyclodextrin glycosyltr 30.8 35 0.0012 34.0 3.9 28 204-231 110-137 (686)
283 1j0h_A Neopullulanase; beta-al 30.7 36 0.0012 33.2 3.9 25 207-231 220-244 (588)
284 1ua7_A Alpha-amylase; beta-alp 30.6 28 0.00095 32.4 2.9 27 205-231 70-96 (422)
285 1w41_A 50S ribosomal protein L 30.2 1.1E+02 0.0038 21.8 5.7 43 184-228 21-63 (101)
286 1chr_A Chloromuconate cycloiso 29.9 1.2E+02 0.004 27.5 7.1 49 181-229 248-296 (370)
287 3aj7_A Oligo-1,6-glucosidase; 29.8 38 0.0013 33.1 3.9 26 206-231 84-109 (589)
288 3bc9_A AMYB, alpha amylase, ca 29.8 36 0.0012 33.4 3.7 26 206-231 205-230 (599)
289 3bmv_A Cyclomaltodextrin gluca 29.8 37 0.0013 33.8 3.9 28 204-231 111-138 (683)
290 1uok_A Oligo-1,6-glucosidase; 29.7 32 0.0011 33.3 3.3 26 206-231 75-100 (558)
291 1ccw_A Protein (glutamate muta 29.6 65 0.0022 24.6 4.5 49 182-230 41-92 (137)
292 1wuf_A Hypothetical protein LI 29.4 1.2E+02 0.004 27.8 7.0 49 181-229 261-309 (393)
293 3v7e_A Ribosome-associated pro 29.3 71 0.0024 22.0 4.2 44 184-229 16-59 (82)
294 3kts_A Glycerol uptake operon 29.2 70 0.0024 26.3 4.8 46 183-232 18-65 (192)
295 4aef_A Neopullulanase (alpha-a 29.1 33 0.0011 33.9 3.3 49 183-231 237-307 (645)
296 1kko_A 3-methylaspartate ammon 29.1 1E+02 0.0035 28.5 6.6 50 180-229 309-358 (413)
297 1wzl_A Alpha-amylase II; pullu 29.0 37 0.0013 33.1 3.7 25 207-231 217-241 (585)
298 2ze0_A Alpha-glucosidase; TIM 28.7 34 0.0012 33.1 3.3 26 206-231 75-100 (555)
299 1m53_A Isomaltulose synthase; 28.6 36 0.0012 33.1 3.5 26 206-231 89-114 (570)
300 2ab1_A Hypothetical protein; H 28.3 1.1E+02 0.0036 23.1 5.4 48 181-229 48-95 (122)
301 2ps2_A Putative mandelate race 28.0 63 0.0022 29.3 4.8 51 180-230 247-297 (371)
302 3mio_A DHBP synthase, 3,4-dihy 27.9 92 0.0032 25.9 5.3 34 195-228 158-194 (206)
303 1kcz_A Beta-methylaspartase; b 27.7 1.2E+02 0.0042 27.9 6.9 57 171-229 302-358 (413)
304 2zic_A Dextran glucosidase; TI 27.7 34 0.0012 33.0 3.1 25 207-231 76-100 (543)
305 3ghf_A Septum site-determining 27.4 1E+02 0.0035 23.1 5.1 45 183-227 26-78 (120)
306 1tks_A 3,4-dihydroxy-2-butanon 27.3 74 0.0025 26.4 4.6 34 195-228 159-194 (204)
307 1w6t_A Enolase; bacterial infe 27.2 74 0.0025 29.8 5.2 48 181-228 332-379 (444)
308 2qdd_A Mandelate racemase/muco 27.2 71 0.0024 29.0 5.1 50 181-230 246-295 (378)
309 1vhx_A Putative holliday junct 27.0 87 0.003 24.5 4.8 54 180-233 40-101 (150)
310 1g5a_A Amylosucrase; glycosylt 26.9 46 0.0016 32.8 3.9 26 206-231 159-184 (628)
311 2pgw_A Muconate cycloisomerase 26.8 60 0.0021 29.6 4.5 50 181-230 250-299 (384)
312 3dip_A Enolase; structural gen 26.7 1.3E+02 0.0046 27.6 6.9 51 180-230 273-323 (410)
313 3e48_A Putative nucleoside-dip 26.5 2.3E+02 0.0078 23.9 8.1 40 183-224 55-98 (289)
314 1iv0_A Hypothetical protein; r 26.4 1.3E+02 0.0044 21.6 5.3 51 180-231 36-94 (98)
315 3t7y_A YOP proteins translocat 26.3 33 0.0011 24.9 2.0 20 212-231 44-63 (97)
316 2qgy_A Enolase from the enviro 26.2 87 0.003 28.7 5.5 52 180-231 253-304 (391)
317 1ea9_C Cyclomaltodextrinase; h 26.2 42 0.0014 32.8 3.4 49 183-231 170-240 (583)
318 1b93_A Protein (methylglyoxal 26.0 1.3E+02 0.0043 23.7 5.6 46 186-231 73-121 (152)
319 2vt1_B Surface presentation of 26.0 36 0.0012 24.5 2.1 20 212-231 29-48 (93)
320 2p8b_A Mandelate racemase/muco 25.8 81 0.0028 28.5 5.2 49 181-229 246-294 (369)
321 4aee_A Alpha amylase, catalyti 25.8 41 0.0014 33.6 3.3 49 183-231 263-333 (696)
322 2pa6_A Enolase; glycolysis, ly 25.8 76 0.0026 29.5 5.0 46 183-228 320-365 (427)
323 3jva_A Dipeptide epimerase; en 25.5 84 0.0029 28.3 5.2 52 180-231 242-293 (354)
324 3czg_A Sucrose hydrolase; (alp 25.4 42 0.0014 33.2 3.3 25 207-231 153-177 (644)
325 1nu5_A Chloromuconate cycloiso 25.3 77 0.0026 28.7 4.9 51 180-230 247-297 (370)
326 1rvk_A Isomerase/lactonizing e 25.2 67 0.0023 29.2 4.5 50 180-229 259-309 (382)
327 4a18_G RPL30; ribosome, eukary 25.1 1.9E+02 0.0066 20.7 6.2 43 184-228 27-69 (104)
328 2al1_A Enolase 1, 2-phospho-D- 25.0 83 0.0028 29.5 5.1 46 183-228 326-371 (436)
329 3c01_E Surface presentation of 25.0 35 0.0012 24.8 2.0 20 212-231 29-48 (98)
330 1uhe_A Aspartate 1-decarboxyla 25.0 1.1E+02 0.0038 22.0 4.5 13 193-205 74-86 (97)
331 1mdl_A Mandelate racemase; iso 25.0 54 0.0019 29.6 3.8 50 180-229 248-297 (359)
332 3u5e_c L32, RP73, YL38, 60S ri 24.9 1.9E+02 0.0065 20.8 6.1 43 184-228 27-69 (105)
333 2akz_A Gamma enolase, neural; 24.4 87 0.003 29.3 5.1 47 182-228 322-368 (439)
334 2hzg_A Mandelate racemase/muco 23.7 88 0.003 28.7 5.0 50 180-229 255-304 (401)
335 3qn3_A Enolase; structural gen 23.6 97 0.0033 28.8 5.2 47 183-229 316-362 (417)
336 2ale_A SNU13, NHP2/L7AE family 23.6 92 0.0032 23.9 4.3 44 184-228 37-80 (134)
337 2poz_A Putative dehydratase; o 23.6 74 0.0025 29.1 4.5 49 181-229 259-307 (392)
338 3on1_A BH2414 protein; structu 23.4 1.6E+02 0.0054 21.0 5.4 43 184-228 23-65 (101)
339 3zss_A Putative glucanohydrola 23.2 59 0.002 32.5 3.9 25 207-231 318-342 (695)
340 1t57_A Conserved protein MTH16 22.9 3.2E+02 0.011 22.5 9.6 49 86-143 32-80 (206)
341 3v7q_A Probable ribosomal prot 22.9 1.8E+02 0.006 20.8 5.6 43 184-228 24-66 (101)
342 3tpc_A Short chain alcohol deh 22.7 1.9E+02 0.0065 24.1 6.7 28 116-143 10-38 (257)
343 3eez_A Putative mandelate race 22.7 94 0.0032 28.3 4.9 50 180-229 245-294 (378)
344 4dxk_A Mandelate racemase / mu 22.7 1.2E+02 0.004 28.0 5.6 49 181-229 270-318 (400)
345 2okt_A OSB synthetase, O-succi 22.4 1.1E+02 0.0039 27.2 5.4 50 181-230 223-272 (342)
346 3ozy_A Putative mandelate race 22.4 91 0.0031 28.6 4.8 49 181-229 256-304 (389)
347 1g57_A DHBP synthase, 3,4-dihy 22.3 1.3E+02 0.0046 25.1 5.3 34 195-228 167-201 (217)
348 2qde_A Mandelate racemase/muco 22.3 81 0.0028 28.9 4.4 51 180-230 248-298 (397)
349 2gdq_A YITF; mandelate racemas 22.0 90 0.0031 28.4 4.7 50 180-229 244-293 (382)
350 2gl5_A Putative dehydratase pr 22.0 79 0.0027 29.1 4.3 50 181-230 278-327 (410)
351 1tkk_A Similar to chloromucona 21.9 86 0.0029 28.3 4.5 49 181-229 247-295 (366)
352 2zc8_A N-acylamino acid racema 21.9 88 0.003 28.3 4.6 48 181-228 241-288 (369)
353 3aie_A Glucosyltransferase-SI; 21.6 65 0.0022 33.0 3.9 26 206-231 689-714 (844)
354 3gd6_A Muconate cycloisomerase 21.6 91 0.0031 28.6 4.6 50 181-230 247-296 (391)
355 3igs_A N-acetylmannosamine-6-p 21.4 2.4E+02 0.0081 23.6 6.9 48 183-231 90-137 (232)
356 3i6i_A Putative leucoanthocyan 21.2 3.2E+02 0.011 23.8 8.2 100 116-227 13-115 (346)
357 3q58_A N-acetylmannosamine-6-p 21.1 2.4E+02 0.0083 23.5 6.9 48 183-231 90-137 (229)
358 1snn_A DHBP synthase, 3,4-dihy 21.0 94 0.0032 26.2 4.1 34 195-228 178-212 (227)
359 2o56_A Putative mandelate race 21.0 75 0.0026 29.2 3.9 49 181-229 275-323 (407)
360 1vmd_A MGS, methylglyoxal synt 21.0 1.6E+02 0.0053 23.9 5.2 46 186-231 89-137 (178)
361 1m7x_A 1,4-alpha-glucan branch 20.9 60 0.002 31.9 3.4 25 207-231 202-226 (617)
362 3m07_A Putative alpha amylase; 20.8 71 0.0024 31.4 3.9 25 207-231 200-224 (618)
363 1wue_A Mandelate racemase/muco 20.5 1.2E+02 0.0041 27.6 5.2 49 181-229 261-309 (386)
364 4e84_A D-beta-D-heptose 7-phos 20.5 1.9E+02 0.0064 25.8 6.5 37 195-231 186-222 (352)
365 3ff4_A Uncharacterized protein 20.4 1.7E+02 0.0057 21.9 5.1 37 185-227 73-109 (122)
366 3cpr_A Dihydrodipicolinate syn 20.2 3.4E+02 0.012 23.6 8.0 56 173-229 26-91 (304)
367 1ivn_A Thioesterase I; hydrola 20.2 2E+02 0.0067 22.4 6.0 13 212-224 88-100 (190)
368 4dwd_A Mandelate racemase/muco 20.1 1E+02 0.0035 28.3 4.6 51 180-231 250-300 (393)
369 3mwc_A Mandelate racemase/muco 20.1 1.2E+02 0.004 27.9 5.1 50 181-230 264-313 (400)
370 3i6e_A Muconate cycloisomerase 20.0 1.2E+02 0.0042 27.6 5.2 49 181-229 252-300 (385)
371 2bhu_A Maltooligosyltrehalose 20.0 66 0.0023 31.5 3.5 25 207-231 190-214 (602)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=3.1e-47 Score=358.58 Aligned_cols=300 Identities=65% Similarity=1.100 Sum_probs=242.2
Q ss_pred cccccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHH
Q 018231 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~ 103 (359)
++.+++.||+++..+.+|..++...|.|+++||++++.|++++...+.+.|.+|||+.+||+++++++++|..+.++.++
T Consensus 32 ~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~ 111 (490)
T 3ou5_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHH
T ss_pred ccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCC
Q 018231 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (359)
Q Consensus 104 ~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 183 (359)
+||+++.+|+++|...||+.||.+++.++++|||+|+..+..+++|++.++......+.+.|..+..++|+++++++.+|
T Consensus 112 lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~ID 191 (490)
T 3ou5_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEEC
T ss_pred HhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999988755444567778888889999998889999
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCC
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp 263 (359)
+|++++...+++||+|++..|.+++.+|++++.+||++.|+++++|.||.+|.+..++.++|+.++|++++++||+|.||
T Consensus 192 yd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGP 271 (490)
T 3ou5_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSC
T ss_pred HHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCC
Confidence 99999999989999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeCCcchh-ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccc
Q 018231 264 RGAMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLI 323 (359)
Q Consensus 264 ~gG~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~ 323 (359)
+||+|+++++.... ...|....+++.++++...+|+..|.|..+.++|++.|+.+..++.
T Consensus 272 rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~ 332 (490)
T 3ou5_A 272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 332 (490)
T ss_dssp SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHH
T ss_pred CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHh
Confidence 99999999864332 1223333447788899999999999999999999999999977753
No 2
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=3.7e-40 Score=323.86 Aligned_cols=304 Identities=63% Similarity=1.052 Sum_probs=255.6
Q ss_pred cchhccccccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHH
Q 018231 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (359)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (359)
+..+++++++.++|+++..+.++..++.+.|+|+++++++|+.|++++.+.+.+.|.+|||+.++|++.+..+++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~ 96 (483)
T 1rv3_A 17 HEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ 96 (483)
T ss_dssp HHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred HHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHH
Confidence 55667778889999999999988777788999999999999999999999998878778998888888888999999999
Q ss_pred HHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCC
Q 018231 99 KRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (359)
Q Consensus 99 ~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (359)
+++++++|+++++|.++|+++||+.++.+++.++++|||+|++++++|++++.+++..++..+.+.|..++.++++++++
T Consensus 97 ~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~ 176 (483)
T 1rv3_A 97 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD 176 (483)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT
T ss_pred HHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC
Confidence 99999999987665567999999988887799999999999999999999999988777767777776677788777766
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCC
Q 018231 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 258 (359)
Q Consensus 179 ~~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K 258 (359)
++.+|+++|++.+++.+||+|+++++|++.+.|+++|.++|+++|+++++|++|+.|.++.+....++.++|++++|+||
T Consensus 177 ~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K 256 (483)
T 1rv3_A 177 TGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHK 256 (483)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSG
T ss_pred CCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcc
Confidence 78999999999998449999998777766888999999999999999999999999988877766655569999999999
Q ss_pred cCCCCCceEEEEeCCcchh-ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 259 SLRGPRGAMIFFRKGVKEI-NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 259 ~l~gp~gG~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
+|.||+||+++++++.... ..+|....|++.+.++...+++..|+|+.+.++|+.+|++++.++
T Consensus 257 ~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~ 321 (483)
T 1rv3_A 257 TLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTP 321 (483)
T ss_dssp GGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSH
T ss_pred cCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhCh
Confidence 9999999999999864211 123333333455555555567778999999999999999987653
No 3
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=7.9e-40 Score=320.05 Aligned_cols=298 Identities=65% Similarity=1.103 Sum_probs=214.4
Q ss_pred ccccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHH
Q 018231 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (359)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~ 104 (359)
+.++.++|+++..+.++..++.+.|.|++++|++++.|++++...+.+.|..||++.++|++.+..+++|+.++++++++
T Consensus 33 ~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l 112 (490)
T 2a7v_A 33 ESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA 112 (490)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred chhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHH
Confidence 57888999999999999888889999999999999999999999999889889999999999888889998899999999
Q ss_pred cCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCH
Q 018231 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (359)
Q Consensus 105 ~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 184 (359)
||+++++|+++|.++||+.+|.+++.++++|||+|++++++|++++..++......+.+.|..++.++++++++++.+|+
T Consensus 113 ~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~ 192 (490)
T 2a7v_A 113 FDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDY 192 (490)
T ss_dssp TTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCH
T ss_pred cCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCH
Confidence 99988665445556677669998999999999999999999998876544322223445566666677777766789999
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCC
Q 018231 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 264 (359)
Q Consensus 185 e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~ 264 (359)
++|++.+.+.++|+|+++.+++|...|+++|.++|++||+++++|++|++|.+..+....++.++|++++|+||+|+||+
T Consensus 193 d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~ 272 (490)
T 2a7v_A 193 NQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGAR 272 (490)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCS
T ss_pred HHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCcccc
Confidence 99999997668999988877788888999999999999999999999998887666555555579999999999999999
Q ss_pred ceEEEEeCCcchhcc-CCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 265 GAMIFFRKGVKEINK-QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 265 gG~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
||++++++++..... .|....+++.++++...+++.+|+|+.+.++|+.+|++++..+
T Consensus 273 GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~ 331 (490)
T 2a7v_A 273 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP 331 (490)
T ss_dssp CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSH
T ss_pred chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhh
Confidence 999999985321100 0111222456666666778888999999999999999888653
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.6e-32 Score=263.18 Aligned_cols=277 Identities=48% Similarity=0.769 Sum_probs=218.5
Q ss_pred hccccccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHH
Q 018231 22 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (359)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 101 (359)
.+.+.++.++|+++..+.++..++.+.|+|.++++++++.|++++.+.+.+.|..||++.+++.+....+.+++.+++++
T Consensus 21 ~~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~l 100 (447)
T 3h7f_A 21 SMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRA 100 (447)
T ss_dssp GGGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHH
Confidence 44677888999999999888777778999999999999999999999887667777888788888777777777666999
Q ss_pred HHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCC
Q 018231 102 LEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181 (359)
Q Consensus 102 a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 181 (359)
++++|++. +.++++||+.++..++.++++|||+|++++++|++++.... .+...|..+..++++++++++.
T Consensus 101 a~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~ 171 (447)
T 3h7f_A 101 KALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHL 171 (447)
T ss_dssp HHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTCS
T ss_pred HHHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccCC
Confidence 99999975 23446666668888999999999999999988887544333 1123344445566666656678
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCC
Q 018231 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 261 (359)
Q Consensus 182 ~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~ 261 (359)
+|+++|++.+.+.++++++++.++++...++++|.++|++||+++|+|++|+.|....+....++.++|++++|+||+|+
T Consensus 172 ~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~ 251 (447)
T 3h7f_A 172 IDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLG 251 (447)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGC
T ss_pred cCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCC
Confidence 99999999997658999998745545555999999999999999999999988766544433344468999999999999
Q ss_pred CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 262 GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 262 gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
||+||++++++ ++.+.+.....++..|+++...++|+.+|+..+..
T Consensus 252 G~~gG~i~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 297 (447)
T 3h7f_A 252 GGRSGLIVGKQ--------------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAAT 297 (447)
T ss_dssp CCSCEEEEECG--------------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTS
T ss_pred CCCeEEEEECH--------------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhC
Confidence 99999999987 44555544445666788888888999898887665
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=7.8e-32 Score=258.84 Aligned_cols=273 Identities=49% Similarity=0.824 Sum_probs=212.2
Q ss_pred cccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHc
Q 018231 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (359)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~ 105 (359)
.++.+++++++.+.++..++.+.++|.++++++++.|++++.+.+.+.+..++++.++|.+....+++++.+++++++++
T Consensus 5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 84 (417)
T 3n0l_A 5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF 84 (417)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 46778999999998777777789999999999999999999998866676677777778877778889988999999999
Q ss_pred CCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHH
Q 018231 106 RLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 185 (359)
Q Consensus 106 g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e 185 (359)
|++++ +|++++|+.++..++.++++|||+|++++++|+++...+.. ....|..+..++++.+ +++.+|++
T Consensus 85 g~~~~----~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~ 154 (417)
T 3n0l_A 85 NCKFA----NVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAK-----VSSSGKMYESCFYGVE-LDGRIDYE 154 (417)
T ss_dssp TCSEE----ECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCHH
T ss_pred CCCCc----ceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhh-----hhhhcceeeeEeccCC-CCCCcCHH
Confidence 99763 48899995588888999999999999999988877554432 2233444555666666 67889999
Q ss_pred HHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc
Q 018231 186 QLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265 (359)
Q Consensus 186 ~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g 265 (359)
+|++.+++.++++|+++++|+|...++++|.++|++||+++|+|++|+.|....+.....+.++|++++|+||+|+|++|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~ 234 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG 234 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC
T ss_pred HHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe
Confidence 99999984489999988666799999999999999999999999999888775544444434579999999999999999
Q ss_pred eEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 266 AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 266 G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
|+++++++ ++.+.+.....++..++++...++++.+++.....
T Consensus 235 G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~ 277 (417)
T 3n0l_A 235 GIIMTNDE-------------ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLS 277 (417)
T ss_dssp EEEEESCH-------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTS
T ss_pred eEEEECCH-------------HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHh
Confidence 99999853 55555554445556678888899999888877553
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=7.3e-31 Score=252.14 Aligned_cols=280 Identities=48% Similarity=0.798 Sum_probs=198.4
Q ss_pred hhcccc--ccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHH
Q 018231 21 KQLNAP--LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (359)
Q Consensus 21 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (359)
+++++. ++.++++++..+.++..+..+.+.+.+++++++|.|++++.+.+.+.+..++++..++.+....+.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (420)
T 3gbx_A 3 AMLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAI 82 (420)
T ss_dssp CBCTTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHH
T ss_pred hHHhhhcchhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHH
Confidence 345444 678999999999887766678899999999999999999999886656556777666666565677777788
Q ss_pred HHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCC
Q 018231 99 KRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (359)
Q Consensus 99 ~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (359)
+++++++|++++ .|++++|+.++..++.++++|||+|++..++|+++..++.. ....|..+..++++.+ +
T Consensus 83 ~~la~~~~~~~~----~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~-~ 152 (420)
T 3gbx_A 83 DRAKELFGADYA----NVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSP-----VNFSGKLYNIVPYGID-E 152 (420)
T ss_dssp HHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-T
T ss_pred HHHHHHhCCCCc----eeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchh-----hhhcccceeEEeccCC-c
Confidence 999999999763 47788886688888899999999999999888876544332 2233444555665666 6
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCC
Q 018231 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 258 (359)
Q Consensus 179 ~~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K 258 (359)
++.+|+++|++++++.++++|+++.+|+|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||
T Consensus 153 ~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK 232 (420)
T 3gbx_A 153 SGKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHK 232 (420)
T ss_dssp TCSCCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSG
T ss_pred cCCcCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeeccc
Confidence 67899999999998757999999866778788999999999999999999999988776544333333358999999999
Q ss_pred cCCCCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 259 SLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 259 ~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+|+||.||+++.++... ++.+.+.....++..++++...++|+.+++..+..
T Consensus 233 ~~~g~~gg~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 284 (420)
T 3gbx_A 233 TLAGPRGGLILAKGGDE-----------ELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAME 284 (420)
T ss_dssp GGCSCSCEEEEESSCCH-----------HHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTS
T ss_pred CCCCCCceEEEEcCCcH-----------HHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHh
Confidence 99899999999987211 33344444344555678888888888888866543
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=3.5e-30 Score=247.75 Aligned_cols=279 Identities=45% Similarity=0.706 Sum_probs=194.0
Q ss_pred hhccccccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHH
Q 018231 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (359)
.++++.++.++++++..+.++..+..+.++|.++++++++.|++++.+.+.+.|..++++.+++.+....+.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (425)
T 3ecd_A 7 PFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIER 86 (425)
T ss_dssp HHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHH
T ss_pred hHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHH
Confidence 45678889999999999988776667889999999999999999999988766656676666666555445566667788
Q ss_pred HHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCC
Q 018231 101 ALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (359)
Q Consensus 101 ~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (359)
+++++|++.. .|++++|+.++..++.+++++||+|++.++.|+++..... .....|..+..++++.+++++
T Consensus 87 ~~~~~~~~~~----~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~ 157 (425)
T 3ecd_A 87 VKRLFNAGHA----NVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTM 157 (425)
T ss_dssp HHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTS
T ss_pred HHHHhCCCCc----eeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccC
Confidence 9999998752 2434555558888889999999999999988877432222 122345445556666665668
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcC
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l 260 (359)
.+|+++|++.+++.++++|+++++++|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+|
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l 237 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTL 237 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGG
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCccc
Confidence 89999999999755899999986666888899999999999999999999998887754433333334799999999999
Q ss_pred CCCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 261 RGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 261 ~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+||+||+++++++ ++.+.+......+..++++...++++.+|+..+..
T Consensus 238 ~g~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 285 (425)
T 3ecd_A 238 RGPRGGFVLTNDE-------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALT 285 (425)
T ss_dssp CCCSCEEEEESCH-------------HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTS
T ss_pred CCCCcEEEEeCCH-------------HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHH
Confidence 9999999999864 44444444444555578888888888888766554
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=9.6e-30 Score=243.34 Aligned_cols=272 Identities=47% Similarity=0.831 Sum_probs=204.6
Q ss_pred ccccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC
Q 018231 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (359)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g 106 (359)
++++++.++..+.++.....+.+.+.+++++.++.+++++.+.+.+.+..+++...++.+.....++++.+++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g 83 (405)
T 2vi8_A 4 LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG 83 (405)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence 45688999999987766656677777888889999999999988644544555555555545567788778899999999
Q ss_pred CCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHH
Q 018231 107 LDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 186 (359)
Q Consensus 107 ~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~ 186 (359)
++++ .|++++|+.++..++.+++++||+|+++++.|+++...... +...|..+..++++++++++.+|+++
T Consensus 84 ~~~~----~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~d~~~ 154 (405)
T 2vi8_A 84 AEHA----NVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSP-----VNFSGVQYNFVAYGVDPETHVIDYDD 154 (405)
T ss_dssp CSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCT-----TSHHHHHSEEEEECBCTTTCSBCHHH
T ss_pred CCce----EEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccch-----hhhccceeEEEecccccccCCcCHHH
Confidence 8752 35678884488888999999999999999888776532211 11233323345545554567899999
Q ss_pred HHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCce
Q 018231 187 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266 (359)
Q Consensus 187 l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG 266 (359)
|++.+++.++++|+++++|+|...++++|.++|++||+++|+|++|+.|..+.+....++...|++++|+||+|+||.||
T Consensus 155 l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG 234 (405)
T 2vi8_A 155 VREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234 (405)
T ss_dssp HHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCE
T ss_pred HHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCCe
Confidence 99999865799998877788877789999999999999999999999877655544333335899999999999888889
Q ss_pred EEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 267 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 267 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
++++++ ++.+.+.....++..++++...++++.+|++.+..
T Consensus 235 ~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~ 275 (405)
T 2vi8_A 235 MILCQE--------------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQ 275 (405)
T ss_dssp EEEECH--------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS
T ss_pred EEEEcH--------------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHh
Confidence 999986 45554444333445678888889998889987654
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=5.4e-29 Score=238.28 Aligned_cols=271 Identities=48% Similarity=0.799 Sum_probs=204.0
Q ss_pred ccChHHHHHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCC
Q 018231 29 VVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108 (359)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~ 108 (359)
..+|.++..+.++..+..+.|++.+++++.++.+++++.+.+.+.+..+|+...++.+......+++.+++++++++|++
T Consensus 6 ~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~ 85 (407)
T 2dkj_A 6 KRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAA 85 (407)
T ss_dssp CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS
T ss_pred ccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 46789999999887777789999999999999999999998865333345544433333444566666778999999997
Q ss_pred CCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHH
Q 018231 109 PEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (359)
Q Consensus 109 ~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~ 188 (359)
++ .|++++|+.++..++.+++++||+|+++++.|+++..+.. .+...|..+..++++.+++++.+|+++|+
T Consensus 86 ~~----~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 156 (407)
T 2dkj_A 86 WA----NVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEVR 156 (407)
T ss_dssp EE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHHH
T ss_pred cc----eEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHHH
Confidence 52 4777888778887888889999999999988877643222 22334544455665555446789999999
Q ss_pred HHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCceEE
Q 018231 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268 (359)
Q Consensus 189 ~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l 268 (359)
+.+++.++++|+++.+++|...|+++|.++|++||+++|+|++|+.|..+.+.....+...|++++|+||+++|+++|++
T Consensus 157 ~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~ 236 (407)
T 2dkj_A 157 RLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLI 236 (407)
T ss_dssp HHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEE
T ss_pred HHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEE
Confidence 99985489999997555677889999999999999999999999887766554333233479999999999999999999
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+++++ ++.+.+.....++..++++...++++.++++.+..
T Consensus 237 ~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 276 (407)
T 2dkj_A 237 LSNDP-------------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQ 276 (407)
T ss_dssp EESCH-------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS
T ss_pred EECCH-------------HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHH
Confidence 99842 45554444334455678888888888888887654
No 10
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.93 E-value=6.5e-25 Score=210.00 Aligned_cols=249 Identities=15% Similarity=0.140 Sum_probs=176.7
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
..+.+.+++..+++.+++++.+.+...+ . .....+.+.+++++++++|++.++ .+++++|++ ++
T Consensus 13 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~sgt~al 77 (411)
T 3nnk_A 13 SRLLMGPGPINADPRVLRAMSSQLIGQY-----------D-PAMTHYMNEVMALYRGVFRTENRW---TMLVDGTSRAGI 77 (411)
T ss_dssp CCEEESSSCCCCCHHHHHHHTSCCCCTT-----------C-HHHHHHHHHHHHHHHHHHTCCCSE---EEEEESCHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhhccccccc-----------c-HHHHHHHHHHHHHHHHHhCCCCCc---EEEECCCcHHHH
Confidence 3467888888999999999886542211 1 122344455789999999997643 377877767 88
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CC
Q 018231 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~ 204 (359)
..++.+++++||+|+++++.|.+.. +...+...|.+++.++ .+ +++.+|+++|++.+++.++++|+++ ++
T Consensus 78 ~~~~~~~~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 148 (411)
T 3nnk_A 78 EAILVSAIRPGDKVLVPVFGRFGHL------LCEIARRCRAEVHTIE--VP-WGEVFTPDQVEDAVKRIRPRLLLTVQGD 148 (411)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHHhcCCCCEEEEecCCchHHH------HHHHHHHcCCeEEEEe--cC-CCCCCCHHHHHHHHhhCCCeEEEEeCCC
Confidence 8899999999999999996664421 1123344566666665 44 5678899999999986589999998 67
Q ss_pred C-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchh-----
Q 018231 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI----- 277 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~----- 277 (359)
| +|.+.|+++|.++|++||+++|+|++|+.|..+.+....+ +|++++|+||+|+|+.| |+++++++....
T Consensus 149 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~ 225 (411)
T 3nnk_A 149 TSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWG---LDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRK 225 (411)
T ss_dssp TTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTT---CSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTC
T ss_pred CCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccC---CcEEEecCccccCCCCceEEEEECHHHHHHHhhcc
Confidence 7 8989999999999999999999999999988877665555 89999999999888888 999998753211
Q ss_pred -----ccCCc---------chh-hhHHHhhccc-cCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 278 -----NKQGK---------EVF-YDYEEKINQA-VFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 278 -----~~~g~---------~~~-~~~~~~~~~~-~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
+.+++ ..+ ++........ ......++++...++++.++++.+.++
T Consensus 226 ~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 286 (411)
T 3nnk_A 226 CVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQE 286 (411)
T ss_dssp CCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 00100 000 0111100000 011224899999999999999887654
No 11
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=4.4e-25 Score=209.02 Aligned_cols=247 Identities=15% Similarity=0.100 Sum_probs=174.4
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
+.+.+++.++++.+++++.+.+...+ . ....++.+.+++++++++|++++. .+|++|+|++ ++.
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~la~~~~~~~~~--~~v~~~~g~t~al~- 68 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT-----------S-KEFVEALAYSLKGLRYVMGASKNY--QPLIIPGGGTSAME- 68 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT-----------S-HHHHHHHHHHHHHHHHHHTCCTTS--EEEEEESCHHHHHH-
T ss_pred eeccCCCCCCCHHHHHHhhccccccc-----------c-HHHHHHHHHHHHHHHHHhCCCCCC--cEEEEcCCcHHHHH-
Confidence 57788888999999999887654311 0 122344455789999999997621 2599999999 888
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-
Q 018231 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (359)
Q Consensus 128 ~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n- 205 (359)
++.+++++||+|+++++.|.+. +. ...+...|.+++.++ .+ .++.+|++++++.+++.++++|+++ ++|
T Consensus 69 ~~~~~~~~gd~vi~~~~~~~~~--~~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 139 (384)
T 3zrp_A 69 SVTSLLKPNDKILVVSNGVFGD--RW----EQIFKRYPVNVKVLR--PS-PGDYVKPGEVEEEVRKSEYKLVALTHVETS 139 (384)
T ss_dssp HGGGGCCTTCEEEEECSSHHHH--HH----HHHHTTSSCEEEEEC--CS-TTCCCCHHHHHHHHHHSCEEEEEEESEETT
T ss_pred HHHhhcCCCCEEEEecCCcchH--HH----HHHHHHcCCcEEEec--CC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 8899999999999998665432 11 112234566665554 45 4578999999999987678999888 667
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhc-c-CCc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-K-QGK 282 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~-~-~g~ 282 (359)
+|...|+++|.++|++||+++|+|++|+.+..+.+....+ +|++++|+||+|+|+.| |+++++++....+ . ...
T Consensus 140 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~ 216 (384)
T 3zrp_A 140 TGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWN---VDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSI 216 (384)
T ss_dssp TTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTT---CSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCS
T ss_pred CceECcHHHHHHHHHhcCCEEEEECcccccCccccccccC---CCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCC
Confidence 8999999999999999999999999999888776665555 89999999999988777 9999987532111 1 110
Q ss_pred chhh-h---HHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 283 EVFY-D---YEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 283 ~~~~-~---~~~~~~~~~--~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
..++ + +........ ....+|+++...++++.++++.+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~ 262 (384)
T 3zrp_A 217 AGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKE 262 (384)
T ss_dssp CCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhc
Confidence 1110 1 111001100 11223699999999999999877653
No 12
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.93 E-value=8.7e-25 Score=206.80 Aligned_cols=258 Identities=15% Similarity=0.073 Sum_probs=174.8
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
...++++++.++|+.|++++.+.+..++ . ....++.+.+++++++++|++.+. ..+++|+|++ ++
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~la~~~g~~~~~--~~i~~~~ggt~al 84 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYFR-----------T-TEFSSTMLENEKFMLEYAKAPEGS--KAVFMTCSSTGSM 84 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCCS-----------S-HHHHHHHHHHHHHHHHHHTCCTTC--EEEEESSCHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCCC-----------C-HHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCChhHHH
Confidence 4578889999999999999987543211 0 223344556789999999997542 1355588877 88
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CC
Q 018231 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~ 204 (359)
..++.++++|||+|+++++.+.++.. . ..+...|.++..++ .+ .++.+|++++++.+++ ++++++++ ++
T Consensus 85 ~~~~~~~~~~gd~vi~~~~~~~~~~~--~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~ 154 (376)
T 3f0h_A 85 EAVVMNCFTKKDKVLVIDGGSFGHRF--V----QLCEIHEIPYVALK--LE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDE 154 (376)
T ss_dssp HHHHHHHCCTTCCEEEEESSHHHHHH--H----HHHHHTTCCEEEEE--CC-TTCCCCHHHHHTTTTS-CCCEEEEESEE
T ss_pred HHHHHhccCCCCeEEEEeCChhhHHH--H----HHHHHcCCceEEEe--CC-CCCCCCHHHHHHhhcc-CceEEEEeccc
Confidence 88899999999999998744333210 0 12233465565565 44 4578999999998876 89999988 66
Q ss_pred C-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccC-C
Q 018231 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ-G 281 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~-g 281 (359)
| +|.+.|+++|.++|++||+++|+|++|+.+..+.+....+ +|++++|+||+++++.| |++++++++...+.. .
T Consensus 155 nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~---~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~ 231 (376)
T 3f0h_A 155 TSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECG---ADVMITGSQKVLACPPGISVIVLAPRGVERVEKSK 231 (376)
T ss_dssp TTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHT---CSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCC
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccC---ccEEEecCcccccCCCceEEEEECHHHHHHhhcCC
Confidence 6 8999999999999999999999999998887665443333 89999999999987777 888888753211110 0
Q ss_pred cchh-hhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhh
Q 018231 282 KEVF-YDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 331 (359)
Q Consensus 282 ~~~~-~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~ 331 (359)
...+ .+...........+...+++...++|+.+|++.+.++....+.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 282 (376)
T 3f0h_A 232 VRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVAR 282 (376)
T ss_dssp CCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 0000 0111111111111223577888888999999887765233444333
No 13
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.92 E-value=2.8e-24 Score=205.96 Aligned_cols=249 Identities=13% Similarity=0.122 Sum_probs=174.3
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
..+.+.+++..+++.+++++.+.....+ . ....++.+.+++++++++|++++. .+++++|++ ++
T Consensus 11 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~l~~~la~~~g~~~~~---~~~~~~s~t~al 75 (416)
T 3isl_A 11 LRTIMTPGPVEVDPRVLRVMSTPVVGQF----------D--PAFTGIMNETMEMLRELFQTKNRW---AYPIDGTSRAGI 75 (416)
T ss_dssp CCEECSSSSCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHTTCCCSE---EEEEESCHHHHH
T ss_pred cceeecCCCcCcCHHHHHHhcccCCCCc----------c--HHHHHHHHHHHHHHHHHhCCCCCc---EEEecCcHHHHH
Confidence 3467778888889999888766322111 1 222444556889999999997653 344777776 88
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CC
Q 018231 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~ 204 (359)
..++.++++|||+|+++++.|.+.. +...+...|.+++.++ .+ .++.+|+++|++++++.++++|+++ ++
T Consensus 76 ~~~~~~l~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 146 (416)
T 3isl_A 76 EAVLASVIEPEDDVLIPIYGRFGYL------LTEIAERYGANVHMLE--CE-WGTVFDPEDIIREIKKVKPKIVAMVHGE 146 (416)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHHhcCCCCEEEEecCCcccHH------HHHHHHhcCCeeEEEe--cC-CCCCCCHHHHHHHHhhCCCcEEEEEccC
Confidence 8788999999999999996665421 1112344566666665 44 4578899999999984489999998 67
Q ss_pred C-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhc----
Q 018231 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN---- 278 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~---- 278 (359)
| +|...|+++|.++|++||+++|+|++|+.|..+.+....+ +|++++|+||+++||.| |++++++++...+
T Consensus 147 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~ 223 (416)
T 3isl_A 147 TSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWK---IDAAIGGTQKCLSVPSGMAPITYNERVADVIAARK 223 (416)
T ss_dssp TTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-
T ss_pred CCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcC---CCEEEecCccccCCCCCeEEEEECHHHHHHhhccc
Confidence 7 8999999999999999999999999999888877666555 89999999999888888 9999887542111
Q ss_pred ---------------cCCcch--h-hhHHHhhcc-ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 279 ---------------KQGKEV--F-YDYEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 279 ---------------~~g~~~--~-~~~~~~~~~-~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
.+|... + .+....... .......++++...++++.+|++.+...
T Consensus 224 ~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 286 (416)
T 3isl_A 224 KVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE 286 (416)
T ss_dssp -----------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 011110 0 011110000 0111124799999999999999877654
No 14
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.92 E-value=2.4e-24 Score=204.93 Aligned_cols=247 Identities=14% Similarity=0.130 Sum_probs=172.9
Q ss_pred CceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHH
Q 018231 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (359)
Q Consensus 48 ~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~ 126 (359)
.+++.+++.++++.+++++.+.+...+ . .......+.+++++++++|++++. +|++|+|++ ++.
T Consensus 20 ~~~~~~g~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~l~~~la~~~g~~~~~---~i~~~~g~t~a~~ 84 (393)
T 2huf_A 20 KLLMGPGPSNAPQRVLDAMSRPILGHL----------H--PETLKIMDDIKEGVRYLFQTNNIA---TFCLSASGHGGME 84 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCCCSE---EEEESSCHHHHHH
T ss_pred eEEecCCCCCCCHHHHHHHHhhhccCC----------C--HHHHHHHHHHHHHHHHHhCCCCCc---EEEEcCcHHHHHH
Confidence 467778888899999999887654321 0 122334445779999999997642 499999999 888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC
Q 018231 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (359)
Q Consensus 127 ~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n 205 (359)
.++.+++++||+|+++++.|.+.. .. ..+...|.+++.++ .+ +++.+|+++|++.+++.++++|+++ ++|
T Consensus 85 ~~~~~~~~~gd~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 155 (393)
T 2huf_A 85 ATLCNLLEDGDVILIGHTGHWGDR--SA----DMATRYGADVRVVK--SK-VGQSLSLDEIRDALLIHKPSVLFLTQGDS 155 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH--HH----HHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHHhCCCCEEEEECCCcchHH--HH----HHHHHcCCeeEEEe--CC-CCCCCCHHHHHHHHhccCCcEEEEEccCC
Confidence 889999999999999997765531 10 01122455565565 44 4568999999999975479999988 666
Q ss_pred -CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhcc-CC-
Q 018231 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK-QG- 281 (359)
Q Consensus 206 -~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~-~g- 281 (359)
+|...|+++|.++|+++|+++|+|++|+.|..+.++...+ +|++++|+||+|+|+.| |++++++++...+. .+
T Consensus 156 ptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~ 232 (393)
T 2huf_A 156 STGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWE---IDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNT 232 (393)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTT---CSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSS
T ss_pred CccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcC---ccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCC
Confidence 8988999999999999999999999999887766544434 89999999999988888 99999874311100 00
Q ss_pred -cchhh-hH---HHhhccc-cCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 282 -KEVFY-DY---EEKINQA-VFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 282 -~~~~~-~~---~~~~~~~-~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
...++ .. .+.+... ......++++...++++.+|++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 278 (393)
T 2huf_A 233 KVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACE 278 (393)
T ss_dssp CCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 00000 00 0000000 00112378999999999999988754
No 15
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.92 E-value=9.7e-25 Score=209.84 Aligned_cols=245 Identities=17% Similarity=0.207 Sum_probs=175.3
Q ss_pred hhcCceeeC-CCCCCcHHHHHHHHhhhh--ccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 45 QWKGLELIP-SENFTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 45 ~~~~i~l~~-~~~~~~~~v~~al~~~~~--~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..+.+-|.. +..++++.+++++.+.+. +.+ +++....+.......+..+.+++++++++|++++. |++|+|
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~----v~~~~g 93 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLVGADPRE----IVFTSG 93 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGG----EEEESS
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCe----EEEeCC
Confidence 345677763 444789999999999887 544 33322011111223344455889999999998654 999999
Q ss_pred hH-HHHHHHHhhcC----CCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCC
Q 018231 122 SP-SNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (359)
Q Consensus 122 ~~-a~~~~~~al~~----~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~ 196 (359)
++ ++.+++.++.+ +||+|+++.++|+++...... ....|.++..++ .+ +++.+|+++|++.+++ ++
T Consensus 94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~ 164 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-----LEREGFEVTYLA--PQ-RNGIIDLKELEAAMRD-DT 164 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-----HHHTTCEEEEEC--CC-TTSCCCHHHHHHHCCT-TE
T ss_pred hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-----HHHcCCEEEEec--cC-CCCccCHHHHHHhcCC-Cc
Confidence 88 88878887763 899999999888765432221 122355555554 55 4678999999999987 88
Q ss_pred cEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 197 KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 197 k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+..+.+....+ +|++++|+||++ |+.| |+++++++
T Consensus 165 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~di~~~s~sK~~-g~~g~G~~~~~~~ 240 (423)
T 3lvm_A 165 ILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLK---VDLMSFSGHKIY-GPKGIGALYVRRK 240 (423)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSC---CSEEEEESTTTT-SCSSCEEEEECBT
T ss_pred EEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcC---CCEEEechHHhc-CCCCeEEEEEecc
Confidence 999888 677 8999999999999999999999999999887766555554 899999999955 5666 99999875
Q ss_pred cchhccCCcchhhhHHHhhccccC------CCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 274 VKEINKQGKEVFYDYEEKINQAVF------PGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~------~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
... .+..... ....++++...++++.++++.+...
T Consensus 241 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 281 (423)
T 3lvm_A 241 PRV--------------RIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEE 281 (423)
T ss_dssp TBC--------------CCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccC--------------CCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 311 1111100 1124788999999999999877653
No 16
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=3.4e-24 Score=204.03 Aligned_cols=233 Identities=13% Similarity=0.071 Sum_probs=172.9
Q ss_pred CceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHH
Q 018231 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (359)
Q Consensus 48 ~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~ 126 (359)
.....+++.++++.+++++.+.+.++| + ....++.+.+++++++++|++++. +|++|+|++ ++.
T Consensus 35 ~~l~~~~~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~~~~~la~~~g~~~~~---~v~~t~g~t~al~ 99 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVLQAMNVSPVGHL----------D--PAFLALMDEIQSLLRYVWQTENPL---TIAVSGTGTAAME 99 (393)
T ss_dssp CEECSSSCCCCCHHHHHHHSSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHH
T ss_pred ceeccCCCCCCCHHHHHHHhccccccc----------C--HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCchHHHHH
Confidence 455667777889999999987654322 1 123456667889999999997641 499999999 888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC
Q 018231 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (359)
Q Consensus 127 ~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n 205 (359)
.++.+++++||+|+++++.|.+. . +...+...|.++..++ .+ .++.+|+++|++.+++.++++|+++ ++|
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~--~----~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~n 170 (393)
T 1vjo_A 100 ATIANAVEPGDVVLIGVAGYFGN--R----LVDMAGRYGADVRTIS--KP-WGEVFSLEELRTALETHRPAILALVHAET 170 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHH--H----HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHhccCCCCEEEEEcCChhHH--H----HHHHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHhhCCceEEEEeccCC
Confidence 89999999999999999666541 0 1223344566665555 44 4578999999999975478999887 666
Q ss_pred -CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCCcc
Q 018231 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKE 283 (359)
Q Consensus 206 -~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~ 283 (359)
+|.+.|+++|.++|+++|+++|+|++|++|..+.++...+ +|++++|+||+|++|.+ |++++++++
T Consensus 171 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~di~~~s~sK~l~~~~~~G~l~~~~~~--------- 238 (393)
T 1vjo_A 171 STGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWG---VDLAYSCSQKGLGCSPGASPFTMSSRA--------- 238 (393)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTT---CSEEECCSSSTTCSCSSCEEEEECHHH---------
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccC---ccEEEEcCcccccCCCceEEEEECHHH---------
Confidence 8988899999999999999999999999887665544333 89999999999988877 999998742
Q ss_pred hhhhHHHhhccc-------c----------CCCC--CCCCcHHHHHHHHHHHHHHhc
Q 018231 284 VFYDYEEKINQA-------V----------FPGL--QGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 284 ~~~~~~~~~~~~-------~----------~~~~--~gt~~~~~i~al~~Al~~~~~ 321 (359)
.+.+... . .... .|+++....+++.++++.+.+
T Consensus 239 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~ 290 (393)
T 1vjo_A 239 -----IEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQ 290 (393)
T ss_dssp -----HHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred -----HHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 2222100 0 0112 248899999999999988644
No 17
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.92 E-value=2.6e-24 Score=204.00 Aligned_cols=244 Identities=12% Similarity=0.076 Sum_probs=172.0
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeEEECCChH-HHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNF 126 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~-~~~~~~~v~~tsG~~-a~~ 126 (359)
....+++.++++.+++++.+.+.++| + ....++.+.+++++++++|++ ++ ++++|+|++ ++.
T Consensus 22 ~l~~~~~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~~~~~la~~~g~~~~~----~v~~~~g~t~a~~ 85 (386)
T 2dr1_A 22 KLFTAGPVACFPEVLEIMKVQMFSHR----------S--KEYRKVHMDTVERLREFLEVEKGE----VLLVPSSGTGIME 85 (386)
T ss_dssp EECCSSSCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCSSSE----EEEESSCHHHHHH
T ss_pred eeecCCCcCCcHHHHHHHhccccccc----------C--HHHHHHHHHHHHHHHHHhCCCCCc----EEEEeCChHHHHH
Confidence 34456777789999998877654322 1 123556667889999999997 32 599999999 888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh-hCCcEEEEc-CC
Q 018231 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-AS 204 (359)
Q Consensus 127 ~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-~~~k~v~l~-~~ 204 (359)
.++.+++++||+|+++++.|.+.. +...+...|.+++.++ .+ .++.+|+++|++.+++ .++++|+++ ++
T Consensus 86 ~~~~~l~~~gd~vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 156 (386)
T 2dr1_A 86 ASIRNGVSKGGKVLVTIIGAFGKR------YKEVVESNGRKAVVLE--YE-PGKAVKPEDLDDALRKNPDVEAVTITYNE 156 (386)
T ss_dssp HHHHHHSCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHHhhcCCCeEEEEcCCchhHH------HHHHHHHhCCceEEEe--cC-CCCCCCHHHHHHHHhcCCCCcEEEEEeec
Confidence 889999999999999997665520 1113334566665554 44 4578999999999953 378999988 66
Q ss_pred C-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhcc---
Q 018231 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK--- 279 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~--- 279 (359)
| +|.+.|+++|.++|++||+++|+|++|+.|..+.++...+ +|++++|+||+|++|.| |++++++++...+.
T Consensus 157 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~ 233 (386)
T 2dr1_A 157 TSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWG---LDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMP 233 (386)
T ss_dssp TTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTT---CSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCT
T ss_pred CCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccC---CcEEEEeccccccCCCceEEEEECHHHHHHHhcCC
Confidence 6 8988999999999999999999999999887765544333 89999999999988866 99999875321110
Q ss_pred -CCcchhhhHHHhhcccc-CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 280 -QGKEVFYDYEEKINQAV-FPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 280 -~g~~~~~~~~~~~~~~~-~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
.|.. .++...+.... .....++++....+++.++++.+.+.
T Consensus 234 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 276 (386)
T 2dr1_A 234 ERGWY--FDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKM 276 (386)
T ss_dssp TCCST--TCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHT
T ss_pred CCceE--EeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 1110 01111111100 01224688889999999999886543
No 18
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.92 E-value=4e-24 Score=202.99 Aligned_cols=249 Identities=13% Similarity=0.099 Sum_probs=174.3
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
..+.+.+++..+++.+++++.+.+...+ + .........+++++++++|.+.++ .|++|+|++ ++
T Consensus 23 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~gg~~al 87 (393)
T 3kgw_A 23 TRLLLGPGPSNLAPRVLAAGSLRMIGHM---------Q---KEMLQIMEEIKQGIQYVFQTRNPL---TLVVSGSGHCAM 87 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTCCCCCTT---------S---HHHHHHHHHHHHHHHHHHTCCCSE---EEEESCCTTTHH
T ss_pred cceeccCCCCCCCHHHHHHhcccccCcc---------c---HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCcHHHH
Confidence 3467888888899999999877432211 0 112344445779999999987543 488988888 88
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CC
Q 018231 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~ 204 (359)
..++.+++++||+|+++.+.|.+. .....+...|.++..++ .+ .++.+|+++|++.+++.++++|+++ ++
T Consensus 88 ~~~~~~~~~~gd~vl~~~~~~~~~------~~~~~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 158 (393)
T 3kgw_A 88 ETALFNLLEPGDSFLTGTNGIWGM------RAAEIADRIGARVHQMI--KK-PGEHYTLQEVEEGLAQHKPVLLFLVHGE 158 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHH------HHHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHhcCCCCCEEEEEeCCchhH------HHHHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCcEEEEeccC
Confidence 889999999999999987443211 00112334566665565 44 4568999999999987689999988 66
Q ss_pred C-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhcc---
Q 018231 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK--- 279 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~--- 279 (359)
| +|...|+++|.++|++||+++|+|++|+.|..+.+....+ +|++++|+||+|+|+.| |++++++++...+.
T Consensus 159 nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~---~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~ 235 (393)
T 3kgw_A 159 SSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQG---IDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRK 235 (393)
T ss_dssp TTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCS
T ss_pred CcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcC---CCEEEecCcccccCCCceeEEEECHHHHHHHhccC
Confidence 6 8988899999999999999999999999887776655555 89999999999988887 99999875321111
Q ss_pred CCc-chhhhHH---HhhccccCC-CCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 280 QGK-EVFYDYE---EKINQAVFP-GLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 280 ~g~-~~~~~~~---~~~~~~~~~-~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
.+. ..+.++. ..+...... ...++++...++++.++++.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 283 (393)
T 3kgw_A 236 TKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQ 283 (393)
T ss_dssp SCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 011 1111111 111100111 123788999999999999877653
No 19
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=9.8e-25 Score=204.34 Aligned_cols=241 Identities=13% Similarity=0.082 Sum_probs=169.2
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
+++.+++.++++.+++++.+.+..++ + .........+++++++++|++++ ++++|+|++ ++..
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~~--------~----~~~~~~~~~l~~~la~~~g~~~~----~i~~~~g~t~a~~~ 66 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHHR--------T----EAAREVFLKARGLLREAFRTEGE----VLILTGSGTLAMEA 66 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCTT--------S----HHHHHHHHHHHHHHHHHHTCSSE----EEEEESCHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCcc--------C----HHHHHHHHHHHHHHHHHhCCCCc----eEEEcCchHHHHHH
Confidence 57888999999999999988764311 0 11222333477999999999753 599999999 8888
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-
Q 018231 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (359)
Q Consensus 128 ~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n- 205 (359)
++.++++|||+|++++++|+++. .. ..+...|.+++.++ .+ +++.+|++++++ + ++++|+++ ++|
T Consensus 67 ~~~~~~~~gd~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~---~-~~~~v~~~~~~np 133 (352)
T 1iug_A 67 LVKNLFAPGERVLVPVYGKFSER--FY----EIALEAGLVVERLD--YP-YGDTPRPEDVAK---E-GYAGLLLVHSETS 133 (352)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHH--HH----HHHHHTTCEEEEEE--CC-TTCCCCTTTSCC---S-SCSEEEEESEETT
T ss_pred HHHhccCCCCeEEEEeCCchhHH--HH----HHHHHcCCceEEEe--CC-CCCCCCHHHHhc---c-CCcEEEEEEecCC
Confidence 99999999999999997776542 11 01122465565565 44 456789888876 4 79999887 666
Q ss_pred CCChhhHHHHHHHHHHc--CCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCCc
Q 018231 206 YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 282 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~ 282 (359)
+|...|+++|.++|+++ |+++|+|++|+.|..+.+....+ +|++++|+||++.||.| |+++++++.......+.
T Consensus 134 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~ 210 (352)
T 1iug_A 134 TGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMG---VDAAASGSQKGLMCPPGLGFVALSPRALERLKPRG 210 (352)
T ss_dssp TTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGT---CSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCS
T ss_pred cceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccC---eeEEEecCcccccCCCceeEEEECHHHHHHhhCCC
Confidence 89999999999999999 99999999998887665543333 89999999999989888 99999875321111100
Q ss_pred chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 283 EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
. ..++...+.........++++...++++.++++.+.+.
T Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 249 (352)
T 1iug_A 211 Y-YLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR 249 (352)
T ss_dssp S-TTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG
T ss_pred c-eeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 00111111111111224788999999999999887653
No 20
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.92 E-value=3.2e-24 Score=204.02 Aligned_cols=246 Identities=15% Similarity=0.084 Sum_probs=168.0
Q ss_pred ceee-CCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHH
Q 018231 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (359)
Q Consensus 49 i~l~-~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~ 126 (359)
+-|. ++..++++.+++++.+.+.+++ + .......+.+++++++++|++++ +|++|+|++ ++.
T Consensus 10 ~yl~~~~~~~~~~~v~~a~~~~~~~~~--------~----~~~~~~~~~l~~~la~~~g~~~~----~v~~t~g~t~a~~ 73 (392)
T 2z9v_A 10 VITLTAGPVNAYPEVLRGLGRTVLYDY--------D----PAFQLLYEKVVDKAQKAMRLSNK----PVILHGEPVLGLE 73 (392)
T ss_dssp SEECSSSCCCCCHHHHHHTTSCCCCTT--------S----HHHHHHHHHHHHHHHHHTTCSSC----CEEESSCTHHHHH
T ss_pred ceeecCCCcCCCHHHHHHHhccccccc--------c----HHHHHHHHHHHHHHHHHhCCCCC----EEEEeCCchHHHH
Confidence 3443 5566789999999887654311 0 11222333477999999999754 499999988 888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh-hCCcEEEEc-CC
Q 018231 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-AS 204 (359)
Q Consensus 127 ~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-~~~k~v~l~-~~ 204 (359)
.++.+++++||+|++++++|.+.. .. ..+...|.+++.++ .+ +++.+|+++|++.+++ .++++|+++ ++
T Consensus 74 ~~~~~~~~~gd~Vl~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 144 (392)
T 2z9v_A 74 AAAASLISPDDVVLNLASGVYGKG--FG----YWAKRYSPHLLEIE--VP-YNEAIDPQAVADMLKAHPEITVVSVCHHD 144 (392)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHHH--HH----HHHHHHCSCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHHhcCCCCEEEEecCCcccHH--HH----HHHHHcCCceEEee--CC-CCCCCCHHHHHHHHhcCCCCcEEEEeccC
Confidence 888999999999999997766541 11 01122465565565 44 3467999999999953 278999887 66
Q ss_pred C-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhc---c
Q 018231 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN---K 279 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~---~ 279 (359)
| +|...|+++|.++|+++|+++|+|++|+.|..+.+....+ +|++++|+||+++|+.| |+++++++....+ .
T Consensus 145 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~---~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~ 221 (392)
T 2z9v_A 145 TPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCK---ADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANP 221 (392)
T ss_dssp GGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGT---CSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCT
T ss_pred CCCceeccHHHHHHHHHHcCCeEEEEcccccCCccccccccc---ceEEEecCcccccCCCceeEEEECHHHHHHhhhcc
Confidence 6 8989999999999999999999999999887765543333 89999999999988888 9999987431110 0
Q ss_pred C-CcchhhhHHHhhcc-ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 280 Q-GKEVFYDYEEKINQ-AVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 280 ~-g~~~~~~~~~~~~~-~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
. .+...+++...+.. .......++++...++++.++++.+.+.
T Consensus 222 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 266 (392)
T 2z9v_A 222 LAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNE 266 (392)
T ss_dssp TSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 0 00000000000000 0011124789999999999999887653
No 21
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.92 E-value=1.3e-24 Score=205.22 Aligned_cols=234 Identities=17% Similarity=0.191 Sum_probs=170.8
Q ss_pred CCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhh
Q 018231 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (359)
Q Consensus 54 ~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al 132 (359)
+..++++.+++++.+.+.+.+ +++...+ .......++.+.+++++++++|++++ +|++|+|++ ++..++.++
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~----~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 8 SAKPVDERILEAMLPYMTESF--GNPSSVH-SYGFKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSC--CCTTCSS-HHHHHHHHHHHHHHHHHHHHTTCTTE----EEEEESSHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHhhc--CCCcccc-hHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEECCchHHHHHHHHHh
Confidence 445778999999999887644 3443311 11122345555688999999999764 499999999 888788888
Q ss_pred c----CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-C
Q 018231 133 L----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 206 (359)
Q Consensus 133 ~----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~ 206 (359)
+ +|||+|++++++|+++...... ....|.++..++ .+ +++.+|+++|++.+++ ++++|+++ ++| +
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~-----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~npt 151 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPAKF-----LQKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHH-----HHHTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHHHH-----HHhcCCEEEEec--cC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCc
Confidence 7 9999999999888776543221 112355555554 55 5678999999999987 89999888 777 8
Q ss_pred CChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcch--hccCCcc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE--INKQGKE 283 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~--~~~~g~~ 283 (359)
|...|+++|.++|++||+ +|+|++|+.|..+.+....+ +|++++|+||++ |+.| |+++++++... ...++..
T Consensus 152 G~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~-g~~g~g~~~~~~~~~~~~~~~~~~~ 226 (382)
T 4hvk_A 152 GTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIG---ADMLTISSNDIY-GPKGVGALWIRKEAKLQPVILGGGQ 226 (382)
T ss_dssp CBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHT---CSEEEEESGGGT-SCTTCEEEEEETTCCCCCSSCSSCT
T ss_pred eeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcC---CCEEEEeHHHhc-CCCceEEEEEcCccCcCcccccCCC
Confidence 999999999999999999 99999999887765544334 899999999964 6766 99999885311 1111111
Q ss_pred hhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018231 284 VFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 320 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~ 320 (359)
......++++...++++.++++.+.
T Consensus 227 ------------~~~~~~~~~~~~~~~~~~~al~~~~ 251 (382)
T 4hvk_A 227 ------------ENGLRSGSENVPSIVGFGKAAEITA 251 (382)
T ss_dssp ------------GGGTSCSCCCHHHHHHHHHHHHHHH
T ss_pred ------------cCccccCCcCHHHHHHHHHHHHHHH
Confidence 0011247889999999999988655
No 22
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=4.6e-24 Score=203.46 Aligned_cols=256 Identities=17% Similarity=0.171 Sum_probs=171.8
Q ss_pred CceeeCCCC-CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeEEECCChH-H
Q 018231 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-S 124 (359)
Q Consensus 48 ~i~l~~~~~-~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~-~~~~~~~~v~~tsG~~-a 124 (359)
.+.|..+.+ +.|+.+++++.+.+.+.+ +++....+............+++++++++|. +++ +|++|+|++ +
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t~a 97 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKRASLFINARSAE----ELVFVRGTTEG 97 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCC----eEEEeCChhHH
Confidence 567765443 578999999999887632 2222100000001122333477999999998 444 499999998 8
Q ss_pred HHHHHHhh----cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 018231 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (359)
Q Consensus 125 ~~~~~~al----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~ 200 (359)
+..++.++ +++||+|++++++|++...++.. .+...|.+++.++ .+ +++.+|+++|++.+++ ++++|+
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~-~~~~v~ 169 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQM----LCARVGAELRVIP--LN-PDGTLQLETLPTLFDE-KTRLLA 169 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHTCEEEEEC--BC-TTSCBCGGGHHHHCCT-TEEEEE
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHH----HHHhCCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CCeEEE
Confidence 88889998 89999999999888876533221 1223465555554 44 4578999999999987 899998
Q ss_pred Ec-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchh
Q 018231 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (359)
Q Consensus 201 l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (359)
++ ++| +|.+.|+++|.++|++||+++|+|++|+.|..+.+.... +.|++++|+||++ ||.| |++++++++...
T Consensus 170 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~G~G~~~~~~~~~~~ 245 (406)
T 1kmj_A 170 ITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHKLY-GPTGIGILYVKEALLQE 245 (406)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHHHHHH
T ss_pred EeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCccccc---CCCEEEEEchhcc-CCCCcEEEEEeHHHHhh
Confidence 87 666 899999999999999999999999999887665433222 3899999999987 7777 999998743111
Q ss_pred ----ccCCcchh-hhHHHhhccccCCC--CCCCCcHHHHHHHHHHHHHHhc
Q 018231 278 ----NKQGKEVF-YDYEEKINQAVFPG--LQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 278 ----~~~g~~~~-~~~~~~~~~~~~~~--~~gt~~~~~i~al~~Al~~~~~ 321 (359)
..+|+... ............+. ..|++++..++++.++++.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 296 (406)
T 1kmj_A 246 MPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSA 296 (406)
T ss_dssp CCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred cCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHH
Confidence 11111000 00000000000011 1378899999999888988764
No 23
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.91 E-value=1.5e-23 Score=199.64 Aligned_cols=247 Identities=14% Similarity=0.120 Sum_probs=171.1
Q ss_pred CceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHH
Q 018231 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (359)
Q Consensus 48 ~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~ 126 (359)
.+++.+++..+++.+++++.+.+..+| . .........+++.+++++|++++. +|++|+|++ ++.
T Consensus 19 ~~~~~~~p~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~ 83 (396)
T 2ch1_A 19 KIMMGPGPSNCSKRVLTAMTNTVLSNF----------H--AELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGME 83 (396)
T ss_dssp CBCCSSSSCCCCHHHHHHTTSCCCCTT----------C--HHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhccccccCC----------C--hhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHH
Confidence 466777777789999998877543311 0 112222334779999999998752 499999999 888
Q ss_pred HHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC
Q 018231 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (359)
Q Consensus 127 ~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n 205 (359)
.++.+++++||+|+++++.|.++. . ...+...|.+++.++ .+ .++.+|+++|++.+++.++++|+++ ++|
T Consensus 84 ~~~~~~~~~gd~vl~~~~~~~~~~--~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~n 154 (396)
T 2ch1_A 84 AMLSNLLEEGDRVLIAVNGIWAER--A----VEMSERYGADVRTIE--GP-PDRPFSLETLARAIELHQPKCLFLTHGDS 154 (396)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH--H----HHHHHHTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCeEEEEcCCcccHH--H----HHHHHHcCCceEEec--CC-CCCCCCHHHHHHHHHhCCCCEEEEECCCC
Confidence 889999999999999997666541 0 012334566665565 44 4578999999999976579999988 666
Q ss_pred -CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCC--
Q 018231 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG-- 281 (359)
Q Consensus 206 -~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g-- 281 (359)
+|...|+++|.++|+++|+++|+|++|++|..+.++...+ +|++++|+||+++++.| |+++++++....+...
T Consensus 155 ptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~ 231 (396)
T 2ch1_A 155 SSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWE---IDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRT 231 (396)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTT---CCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSS
T ss_pred CCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcC---cCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccC
Confidence 8988899999999999999999999999887765544444 89999999999988888 9999987432111000
Q ss_pred --cchhhh---HHHhhccc-cCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 282 --KEVFYD---YEEKINQA-VFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 282 --~~~~~~---~~~~~~~~-~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+...+. +...+... ......++++...++++.++++.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 277 (396)
T 2ch1_A 232 KSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAE 277 (396)
T ss_dssp CCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred cccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 000000 01111100 00113478899999999999988643
No 24
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.91 E-value=3.8e-24 Score=204.63 Aligned_cols=242 Identities=13% Similarity=0.081 Sum_probs=172.1
Q ss_pred CceeeCCCC-CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 48 ~i~l~~~~~-~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
.+.|..+.+ ++++.+++++.+.+...+ +++...+ ..........+.+++++++++|++++ +|++|+|++ ++
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~al 99 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVGAH-PSARRSAAVLDAAREAVADLVNADPG----GVVLGADRAVLL 99 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCSSS-HHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCCcc-HHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCChHHHH
Confidence 466654333 678999999999887532 2222111 10011233344577999999999764 499999999 77
Q ss_pred HHHHHhh---cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 126 FQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 126 ~~~~~al---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
..++.++ +++||+|++++++|+++..+.... ....|.+++.++ .+++++.+|+++|++.+++ ++++|+++
T Consensus 100 ~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~v~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 172 (406)
T 3cai_A 100 SLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRA----AHRYGAKVKWAE--VDIETGELPTWQWESLISK-STRLVAVN 172 (406)
T ss_dssp HHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHH----HHHHBCEEEEEC--CCTTTCCCCGGGHHHHCCT-TEEEEEEE
T ss_pred HHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHH----HHhcCCeEEEEe--cCcccCCcCHHHHHHHhCC-CceEEEEe
Confidence 7677777 799999999998888765433211 111355565554 4434678999999999987 89999887
Q ss_pred -CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCce-EEEEeCCcchhcc
Q 018231 203 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA-MIFFRKGVKEINK 279 (359)
Q Consensus 203 -~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG-~l~~~~~~~~~~~ 279 (359)
++| +|.+.|+++|.++|+++|+++|+|++|+.|..+.+....+ +|++++|+||++ ||.+| ++++++
T Consensus 173 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~---~d~~~~s~~K~~-g~~~G~~~~~~~------- 241 (406)
T 3cai_A 173 SASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETD---ADVVTVNAHAWG-GPPIGAMVFRDP------- 241 (406)
T ss_dssp SBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHC---CSEEEEEGGGGT-SCSCEEEEESCH-------
T ss_pred CCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcC---CCEEEeehhhhc-CCCcCeEEEEeh-------
Confidence 667 8999999999999999999999999998877655433333 899999999976 56577 888877
Q ss_pred CCcchhhhHHHhhccccC--------CCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 280 QGKEVFYDYEEKINQAVF--------PGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 280 ~g~~~~~~~~~~~~~~~~--------~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
++.+.+..... ....||++...++++.++++.+.+
T Consensus 242 -------~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 284 (406)
T 3cai_A 242 -------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAA 284 (406)
T ss_dssp -------HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHT
T ss_pred -------HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHH
Confidence 33333322210 012478999999999999988765
No 25
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.91 E-value=4.1e-24 Score=199.85 Aligned_cols=245 Identities=15% Similarity=0.068 Sum_probs=167.8
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
+++++++.++++.|++++.+.+..++ + ....+..+.+++++++++|++.+. .+|++|+|++ ++..
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~g~~~~~--~~v~~t~g~t~a~~~ 67 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGHL---------D---PEVLRVNRAIQERLAALFDPGEGA--LVAALAGSGSLGMEA 67 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCTT---------C---HHHHHHHHHHHHHHHHHHCCCTTC--EEEEESSCHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhccccccc---------C---HHHHHHHHHHHHHHHHHhCCCCCC--ceEEEcCCcHHHHHH
Confidence 57889999999999999887654311 1 112233445779999999986211 2599999999 8887
Q ss_pred HHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-
Q 018231 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (359)
Q Consensus 128 ~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n- 205 (359)
++.++++ |+|++++++|+++ ++. ..+...|.+++.++ .+ +++.+|+++|++.+++.++++|+++ ++|
T Consensus 68 ~~~~~~~--d~vl~~~~~~~~~--~~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 136 (353)
T 2yrr_A 68 GLANLDR--GPVLVLVNGAFSQ--RVA----EMAALHGLDPEVLD--FP-PGEPVDPEAVARALKRRRYRMVALVHGETS 136 (353)
T ss_dssp HHHTCSC--CCEEEEECSHHHH--HHH----HHHHHTTCCEEEEE--CC-TTSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred HHHHhcC--CcEEEEcCCCchH--HHH----HHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCC
Confidence 8888876 8999988666654 111 12233466665565 44 4578999999999976478999887 666
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCCcch
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEV 284 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~ 284 (359)
+|...|+++|.++|+++|+++|+|++|+.|..+.++... ++|++++|+||+++||.| |+++++++....+.. ...
T Consensus 137 tG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~-~~~ 212 (353)
T 2yrr_A 137 TGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAM---GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG-KRG 212 (353)
T ss_dssp TTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC-CSC
T ss_pred cceecCHHHHHHHHHHcCCeEEEEcCccccccccccccc---CceEEEecCcccccCCCceEEEEECHHHHHHhcc-CCC
Confidence 898899999999999999999999999877654433222 379999999999988888 999998843211110 000
Q ss_pred hh-hHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 285 FY-DYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 285 ~~-~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++ +..............++++...++++.++++.+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 251 (353)
T 2yrr_A 213 WYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEE 251 (353)
T ss_dssp STTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 00 000000000011123788999999999999887543
No 26
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.91 E-value=6.9e-24 Score=200.78 Aligned_cols=234 Identities=16% Similarity=0.189 Sum_probs=165.9
Q ss_pred CCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc
Q 018231 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL 133 (359)
Q Consensus 55 ~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~ 133 (359)
..++++.|++++.+.+.+.+ +++...+ ..........+.+++++++++|++++ +|++|+|++ ++..++.++.
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~~~~~~l~ 81 (382)
T 4eb5_A 9 AKPVDERILEAMLPYMTESF--GNPSSVH-SYGFKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSC--CCTTCSS-HHHHHHHHHHHHHHHHHHHHHTCTTE----EEEEESSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcc--CCCCCCc-HHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEcCchHHHHHHHHHHHH
Confidence 34789999999999887533 3332211 11112234445578999999999764 599999988 8888888887
Q ss_pred ----CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CC
Q 018231 134 ----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 207 (359)
Q Consensus 134 ----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g 207 (359)
++||+|++++++|+++...... ....|.+++.++ .+ +++.+|+++|++.+++ ++++|+++ ++| +|
T Consensus 82 ~~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG 152 (382)
T 4eb5_A 82 MRNARKGKHILVSAVEHMSVINPAKF-----LQKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIG 152 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHHHHH-----HTTTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTC
T ss_pred hhccCCCCEEEECCCcchHHHHHHHH-----HHhCCcEEEEec--cC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCcc
Confidence 8999999999888766433221 112355555554 55 4578999999999987 78998887 677 89
Q ss_pred ChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCc--chhccCCcch
Q 018231 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEINKQGKEV 284 (359)
Q Consensus 208 ~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~--~~~~~~g~~~ 284 (359)
...|+++|.++|++||++ |+|++|+.|..+.++... ++|++++|+||+ .||.| |+++++++. .....+++.
T Consensus 153 ~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~---~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~~~~~~~~- 226 (382)
T 4eb5_A 153 TIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKI---GADMLTISSNDI-YGPKGVGALWIRKEAKLQPVILGGGQ- 226 (382)
T ss_dssp BBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHH---TCSEEEEETGGG-TCCSSCEEEEEETTCCCCCSSCSSCT-
T ss_pred ccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCcccc---CCCEEEeehHHh-cCCCceEEEEEccccccCceecCCCc-
Confidence 999999999999999999 999999977655433222 379999999997 56777 999998852 111111100
Q ss_pred hhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 285 FYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
. .....++++...++++.++++.+.+
T Consensus 227 --~---------~~~~~~~~~~~~~~~~~~al~~~~~ 252 (382)
T 4eb5_A 227 --E---------NGLRSGSENVPSIVGFGKAAEITAM 252 (382)
T ss_dssp --G---------GGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred --c---------ccccCCCccHHHHHHHHHHHHHHHH
Confidence 0 0012378888888999899987654
No 27
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=4.7e-24 Score=201.28 Aligned_cols=239 Identities=15% Similarity=0.093 Sum_probs=165.6
Q ss_pred cCceeeC--CCCCCcHHHHHHHHhhhhccCCCCCC--CCcccCCchhHHHHHHHHHHH-HHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIP--SENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKR-ALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~--~~~~~~~~v~~al~~~~~~~~~~g~~--~~~~~~~~~~~~~l~~~~~~~-~a~~~g~~~~~~~~~v~~tsG 121 (359)
+.+.|.. +..++++.+++++.+.+......++. ....+.......+ ++++ +++++|.+ . |++|+|
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~la~~~~~~--~----v~~~~g 77 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHD----FIHNQLPKFLGCD--V----ARVTNG 77 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHH----HHHTHHHHHTTSS--E----EEEESS
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHH----HHHHHHHHHcCCC--E----EEEeCC
Confidence 4566654 35678999999999877652110110 0111112233443 5588 99999987 3 999999
Q ss_pred hH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh----hCC
Q 018231 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----FRP 196 (359)
Q Consensus 122 ~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~----~~~ 196 (359)
++ ++..++.+++++||+|+++++.|.++... +...|.+++.++.+.+ +++.+|+++|++.+++ .++
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~ 148 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYVA--------AERAGLNIALVPKTDY-PDYAITPENFAQTIEETKKRGEV 148 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH--------HHHTTCEEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCE
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHHH--------HHHcCCeEEEeecccC-CCCCcCHHHHHHHHHhhcccCCe
Confidence 88 88889999999999999999777765432 3345666655652255 4578999999999983 278
Q ss_pred cEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 197 KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 197 k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
++++++ ++| +|...|+++|.++|+++|+++|+|++|+.|..+.+.... +.|++++|+||++++|.+ |+++++++
T Consensus 149 ~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 149 VLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEI---GADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHH---TCSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred EEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhc---CCCEEEecCCcCCCCCCCcEEEEEech
Confidence 888887 667 899999999999999999999999999988765433222 379999999999987766 99999885
Q ss_pred cchhccCCcchhhhHHHh-hccccCC-CC-----CCCCcHHHHHHHHHHHHHHhc
Q 018231 274 VKEINKQGKEVFYDYEEK-INQAVFP-GL-----QGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 274 ~~~~~~~g~~~~~~~~~~-~~~~~~~-~~-----~gt~~~~~i~al~~Al~~~~~ 321 (359)
+ .+. +...... .. .++++...++++.++++.+..
T Consensus 226 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 266 (371)
T 2e7j_A 226 W--------------AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE 266 (371)
T ss_dssp T--------------TTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH
T ss_pred h--------------hhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH
Confidence 3 222 2211110 11 467888888889889987764
No 28
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=2.1e-23 Score=196.03 Aligned_cols=248 Identities=14% Similarity=0.119 Sum_probs=165.6
Q ss_pred CceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHH
Q 018231 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (359)
Q Consensus 48 ~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~ 126 (359)
.+++.+++..+++.|++++.+.+.+ + ++ .+ ......+ +++++++++|.+.+. ..+++|+|++ ++.
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~~~-~---~~--~~--~~~~~~~----l~~~la~~~g~~~~~--~~v~~~~g~t~a~~ 70 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDSCT-W---DD--DY--NIGVVEQ----IRQQLTALATASEGY--TSVLLQGSGSYAVE 70 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCT-T---SH--HH--HTTTHHH----HHHHHHHHHCSSSSE--EEEEEESCHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhhcC-C---CH--HH--HHHHHHH----HHHHHHHHhCCCCcC--cEEEEecChHHHHH
Confidence 5788888778899999998774321 0 00 00 0022333 568888999832111 2599999999 888
Q ss_pred HHHHhhcCCCCeeeecC-CCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh-CCcEEEEc-C
Q 018231 127 QVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-A 203 (359)
Q Consensus 127 ~~~~al~~~Gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-~~k~v~l~-~ 203 (359)
.++.+++++||+|++++ +.|++.+ ...+...|.++..++ .+ +++.+|+++|++.+++. ++++|+++ +
T Consensus 71 ~~~~~~~~~gd~vi~~~~~~~~~~~-------~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~ 140 (366)
T 1m32_A 71 AVLGSALGPQDKVLIVSNGAYGARM-------VEMAGLMGIAHHAYD--CG-EVARPDVQAIDAILNADPTISHIAMVHS 140 (366)
T ss_dssp HHHHHSCCTTCCEEEEESSHHHHHH-------HHHHHHHTCCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESE
T ss_pred HHHHHhcCCCCeEEEEeCCCccHHH-------HHHHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhcCCCeEEEEEecc
Confidence 89999999999988775 3333211 112234466665565 44 45779999999999863 47888776 6
Q ss_pred CC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCC
Q 018231 204 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG 281 (359)
Q Consensus 204 ~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g 281 (359)
+| +|...|+++|.++|++||+++|+|++|+.|..+.++...+ .|++++|+||+++||.| |++++++++...+...
T Consensus 141 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~ 217 (366)
T 1m32_A 141 ETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALH---IDYLISSANKCIQGVPGFAFVIAREQKLAACKGH 217 (366)
T ss_dssp ETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTT---CSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTC
T ss_pred cCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccC---ccEEEecCcccccCCCceEEEEECHHHHHhhcCC
Confidence 66 8989999999999999999999999999887765544333 89999999999988888 9999988532111110
Q ss_pred -cchhhhHHHhhcc--ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 282 -KEVFYDYEEKINQ--AVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 282 -~~~~~~~~~~~~~--~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
....+++...+.. .......++++...++++.++++.+.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 261 (366)
T 1m32_A 218 SRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKE 261 (366)
T ss_dssp CSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 0000011000000 0001123588899999999999887654
No 29
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.91 E-value=2e-23 Score=200.07 Aligned_cols=240 Identities=15% Similarity=0.132 Sum_probs=169.7
Q ss_pred CceeeCCCC-CCcHHHHHHHHhhhhccCCCCCCC--CcccCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeEEECCChH
Q 018231 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPG--ARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP 123 (359)
Q Consensus 48 ~i~l~~~~~-~~~~~v~~al~~~~~~~~~~g~~~--~~~~~~~~~~~~l~~~~~~~~a~~~g~-~~~~~~~~v~~tsG~~ 123 (359)
.+.|..+.+ ++|+.+++++.+.+.+.. +++. ...|+. ........+++.+++++|. +++ +|++|+|++
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~~--~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t 100 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLSV--RATDAYEAVRNKVAKFINARSPR----EIVYTRNAT 100 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHHH--HHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcc--CCCCcccchHHH--HHHHHHHHHHHHHHHHcCCCCCC----eEEEcCChH
Confidence 578876554 568999999999886522 2221 111211 1112233477999999998 554 499999988
Q ss_pred -HHHHHHHhh----cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 018231 124 -SNFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (359)
Q Consensus 124 -a~~~~~~al----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~ 198 (359)
++..++.++ +++||+|+++++.|++...+... .+...|.+++.++ .+ +++.+|++++++++++ ++++
T Consensus 101 ~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~ 172 (420)
T 1t3i_A 101 EAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQM----VAAKTGAVLKFVQ--LD-EQESFDLEHFKTLLSE-KTKL 172 (420)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHCCEEEEEC--BC-TTSSBCHHHHHHHCCT-TEEE
T ss_pred HHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHH----HHHhcCcEEEEec--cC-CCCCcCHHHHHHhhCC-CceE
Confidence 888889998 89999999999888775322211 1223465565554 44 5678999999999987 8999
Q ss_pred EEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcc
Q 018231 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (359)
Q Consensus 199 v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (359)
|+++ ++| +|...|+++|.++|+++|+++|+|++|+.|..+.+.... +.|++++|+||.+ |+.| |++++++++
T Consensus 173 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~-~~~g~G~~~~~~~~- 247 (420)
T 1t3i_A 173 VTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI---DCDWLVASGHKMC-APTGIGFLYGKEEI- 247 (420)
T ss_dssp EEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHHH-
T ss_pred EEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc---CCCEEEEehhhhc-CCCceEEEEEchHH-
Confidence 9887 666 899999999999999999999999999988765433333 3899999999954 6666 999998743
Q ss_pred hhccCCcchhhhHHHhhccccC------------------CC--CCCCCcHHHHHHHHHHHHHHhc
Q 018231 276 EINKQGKEVFYDYEEKINQAVF------------------PG--LQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 276 ~~~~~g~~~~~~~~~~~~~~~~------------------~~--~~gt~~~~~i~al~~Al~~~~~ 321 (359)
.+.+..... +. ..|++++..++++.++++.+.+
T Consensus 248 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (420)
T 1t3i_A 248 -------------LEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTD 300 (420)
T ss_dssp -------------HHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred -------------HhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHH
Confidence 222221110 11 1378888888888888887764
No 30
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=2.2e-23 Score=197.79 Aligned_cols=258 Identities=15% Similarity=0.104 Sum_probs=173.8
Q ss_pred CceeeCCC-CCCcHHHHHHHHhhhhccCCCCCCCC-cccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-H
Q 018231 48 GLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (359)
Q Consensus 48 ~i~l~~~~-~~~~~~v~~al~~~~~~~~~~g~~~~-~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a 124 (359)
.+.|..+. .+.|+.+++++.+.+.... ...+.. ..|+ . .......+++.+++++|++++ +|++|+|++ +
T Consensus 17 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~--~-~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 88 (390)
T 1elu_A 17 KTYFNFGGQGILPTVALEAITAMYGYLQ-ENGPFSIAANQ--H-IQQLIAQLRQALAETFNVDPN----TITITDNVTTG 88 (390)
T ss_dssp SEECCTTTCCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHH--H-HHHHHHHHHHHHHHHTTSCGG----GEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHHHh-ccCCcchhhHH--H-HHHHHHHHHHHHHHHcCCCHH----HEEEeCChHHH
Confidence 46676443 3567889999998876521 001110 0111 1 112233477899999998765 399999988 8
Q ss_pred HHHHHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 018231 125 NFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (359)
Q Consensus 125 ~~~~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~- 202 (359)
+..++.++ +++||+|+++.++|+++..++.. .+...|.+++.++.+.. +++.+|+++|++.+++ ++++|+++
T Consensus 89 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~ 162 (390)
T 1elu_A 89 CDIVLWGLDWHQGDEILLTDCEHPGIIAIVQA----IAARFGITYRFFPVAAT-LNQGDAAAVLANHLGP-KTRLVILSH 162 (390)
T ss_dssp HHHHHHHSCCCTTCEEEEETTCCHHHHHHHHH----HHHHHCCEEEEECCGGG-SSSSCHHHHHHTTCCT-TEEEEEEES
T ss_pred HHHHHhCCCCCCCCEEEEecCcccHHHHHHHH----HHHHhCcEEEEEcCCCC-CCccchHHHHHHhcCC-CceEEEEec
Confidence 88889998 89999999999777765332110 12234655655654321 4578899999999987 89999888
Q ss_pred CCC-CCChhhHHHHHHHHH----HcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcch
Q 018231 203 ASA-YARLYDYERIRKVCN----KQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (359)
Q Consensus 203 ~~n-~g~~~~l~~i~~la~----~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (359)
++| +|...|+++|.++|+ ++|+++|+|++|+.|..+.++.... .|++++|+||++.|+.| |++++++++..
T Consensus 163 ~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~---~d~~~~s~~K~~~~~~g~G~~~~~~~~~~ 239 (390)
T 1elu_A 163 LLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLE---VDYYAFTGHKWFAGPAGVGGLYIHGDCLG 239 (390)
T ss_dssp BCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSC---CSEEEEESSSTTCCCTTCEEEEECTTTGG
T ss_pred cccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcC---CCEEEccccccccCCCceEEEEECHHhHh
Confidence 777 899999999999999 9999999999999887766554444 89999999998888888 99999886422
Q ss_pred h----ccCCcchhhhH-HHhhcc--ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 277 I----NKQGKEVFYDY-EEKINQ--AVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 277 ~----~~~g~~~~~~~-~~~~~~--~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
. ..++......+ ...+.. .......++++....+++.+|++.+.++
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~ 292 (390)
T 1elu_A 240 EINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQ 292 (390)
T ss_dssp GCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHc
Confidence 1 11111100000 000000 0000123788889999999999887654
No 31
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.90 E-value=3.8e-25 Score=210.32 Aligned_cols=271 Identities=11% Similarity=0.055 Sum_probs=168.2
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCc---ccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEE-CCCh
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR---YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~---~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~-tsG~ 122 (359)
+..++++++.++|++|+++|.+.+.+.+ +++.+. ...+.+..+.++ .+|+.+++++|++.+. +|+| |+|+
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~~~~~~~~~-~ar~~la~ll~~~~~~---evif~t~~~ 100 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRGKEFIQVAE-EAEQDFRDLLNIPSNY---KVLFCHGGG 100 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-------------------------CCH-HHHHHHHHHHTCCTTE---EEEEEESCT
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc---eEEEEcCCc
Confidence 3567789999999999999999887634 222210 111223333333 4889999999995432 4887 5777
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
| ++.+++.+++++||+|++...++.++ ++... +...| .+..++.+...++..+|+++++..+++ +|++|.+
T Consensus 101 T~a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~----a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~-~t~lV~~ 172 (386)
T 3qm2_A 101 RGQFAGVPLNLLGDKTTADYVDAGYWAA--SAIKE----AKKYC-APQIIDAKITVDGKRAVKPMREWQLSD-NAAYLHY 172 (386)
T ss_dssp THHHHHHHHHHCTTCCEEEEEESSHHHH--HHHHH----HTTTS-EEEEEECEEEETTEEEECCGGGCCCCT-TCSCEEE
T ss_pred hHHHHHHHHhccCCCCeEEEEeCCHHHH--HHHHH----HHHhC-CeEEEecCcccCCCCCCchHHHhhcCC-CCcEEEE
Confidence 7 88878999999999987665444443 22211 22235 566665431012223677788878877 8999887
Q ss_pred c-CCC-CCCh-hhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchh
Q 018231 202 G-ASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (359)
Q Consensus 202 ~-~~n-~g~~-~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (359)
+ .+| +|.+ .|+++|. +|+++++|++|++|..++++..+ |++++|+|||+ ||+| |++++++++...
T Consensus 173 ~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~-----~~~~~s~hK~l-GP~G~g~l~v~~~~~~~ 241 (386)
T 3qm2_A 173 CPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY-----GVIYAGAQKNI-GPAGLTLVIVREDLLGK 241 (386)
T ss_dssp CSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC-----SEEEEETTTTT-CCTTEEEEEEEGGGCSC
T ss_pred ECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc-----CEEEEeccccc-CCCccEEEEECHHHHhh
Confidence 7 333 6985 8888875 79999999999999999998775 46789999999 7999 999999975322
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhhccccchhhhhcccC
Q 018231 278 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQNN 345 (359)
Q Consensus 278 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 345 (359)
.....+...++.... ....++||||+++++++.+|++++.+++++++++++.......+...+..
T Consensus 242 ~~~~~p~~~~~~~~~---~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~ 306 (386)
T 3qm2_A 242 AHESCPSILDYTVLN---DNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDN 306 (386)
T ss_dssp CCTTSCGGGCHHHHH---HC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcccCCcHHHHHHHh---hcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111211111 12234589999999999999999987645666655544444444333333
No 32
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.90 E-value=4.8e-24 Score=203.34 Aligned_cols=242 Identities=17% Similarity=0.147 Sum_probs=171.6
Q ss_pred cCceeeC-CCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-H
Q 018231 47 KGLELIP-SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (359)
Q Consensus 47 ~~i~l~~-~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a 124 (359)
+.|.|+. +..++++.+++++.+.+.+.+ +++...+..+ ....+..+.+++++++++|++++ +|++|+|++ +
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~~----~v~~~~g~t~a 92 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGSRHEYG-IRAKRGVERAREYLASTVSAEPD----ELIFTSGATES 92 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHH-HHHHHHHHHHHHHHHHHTTCCGG----GEEEESCHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCcccchhH-HHHHHHHHHHHHHHHHHcCCCCC----cEEEeCCHHHH
Confidence 3455653 334678999999999887533 2232211111 22334455688999999999865 499999998 8
Q ss_pred HHHHHHhhc----CCCC-eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 018231 125 NFQVYTALL----KPHD-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (359)
Q Consensus 125 ~~~~~~al~----~~Gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v 199 (359)
+..++.+++ ++|| +|++++++|+++......+ ...|.+++.++ .+ +++.+|+++|++.+++ ++++|
T Consensus 93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v 163 (400)
T 3vax_A 93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-----AGRGFEVDFLT--PG-PSGRISVEGVMERLRP-DTLLV 163 (400)
T ss_dssp HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-----HTTTCEEEEEC--CC-TTCCCCHHHHHTTCCT-TEEEE
T ss_pred HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-----HhcCCeEEEEc--cC-CCCCcCHHHHHHhcCC-CceEE
Confidence 888888887 8999 9999998887765433311 12355555554 55 4688999999999987 89999
Q ss_pred EEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEE-EeCC-c
Q 018231 200 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIF-FRKG-V 274 (359)
Q Consensus 200 ~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~-~~~~-~ 274 (359)
+++ ++| +|...|+++|.++|+++|+++|+|++|+.+..+.+.... +|++++|+|| +.|+.| |+++ ++++ +
T Consensus 164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~----~d~~~~s~~K-~~g~~g~g~~~~~~~~~~ 238 (400)
T 3vax_A 164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP----IDMISISGHK-IGAPKGVGALVTRRREEM 238 (400)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC----CSEEEEETGG-GTSCSSCEEEEECBCSSS
T ss_pred EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc----CcEEEEeHHH-hCCCCceEEEEEecchhc
Confidence 888 777 899999999999999999999999999988776554322 6999999999 556776 8888 8772 0
Q ss_pred -------chhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 275 -------KEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 275 -------~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
.+...++.. ......++++...++++.++++.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~a~~~al~~~~~ 280 (400)
T 3vax_A 239 DDERVPLEPIMFGGGQ------------ERKLRPGTLPVPLIMGLAEAAKIFEA 280 (400)
T ss_dssp TTCBCCCCCSSCSSCT------------GGGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccccCceecCCCc------------eeeeecCCCCHHHHHHHHHHHHHHHh
Confidence 100111110 00112478899999999999987654
No 33
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.90 E-value=1.1e-22 Score=193.02 Aligned_cols=203 Identities=13% Similarity=0.073 Sum_probs=151.3
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
..+.....++++.+.+++.+.+.+.+ +++. ......++++.+++++++++|++++ +|++|+|++ ++..
T Consensus 33 ~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~~-----~~~~~~~~~~~l~~~la~~~~~~~~----~i~~~~ggt~a~~~ 101 (397)
T 3f9t_A 33 NIFGSMCSNVLPITRKIVDIFLETNL--GDPG-----LFKGTKLLEEKAVALLGSLLNNKDA----YGHIVSGGTEANLM 101 (397)
T ss_dssp CBCSCSCCCCCTHHHHHHHHHTTCCT--TSGG-----GBHHHHHHHHHHHHHHHHHTTCTTC----EEEEESCHHHHHHH
T ss_pred CeEEEecCCCcHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCC----CEEEecCcHHHHHH
Confidence 44555556678899999998876533 2111 1124566777788999999999774 489999999 8888
Q ss_pred HHHhhcCC-------------CCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh
Q 018231 128 VYTALLKP-------------HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (359)
Q Consensus 128 ~~~al~~~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (359)
++.++..+ ||+|+++.+.|+++.. .+...|.+++.++ .+ +++.+|+++|++.+++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~ 170 (397)
T 3f9t_A 102 ALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDLEYIYAP--IK-EDYTIDEKFVKDAVEDY 170 (397)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTCEEEEEC--BC-TTSSBCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCceeEEEe--eC-CCCcCCHHHHHHHHhhc
Confidence 88888665 9999999977776432 3444576665564 55 46889999999999865
Q ss_pred CCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCC---------CCCCC-CceEEEeCCCCcCCC
Q 018231 195 RPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---------PSPFE-YADVVTTTTHKSLRG 262 (359)
Q Consensus 195 ~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~---------~~~~~-~~D~v~~s~~K~l~g 262 (359)
++++++++ ++| +|.+.|+++|.++|++||+++|+|++|+.+..+.... ...+. ++|++++|+||++++
T Consensus 171 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~ 250 (397)
T 3f9t_A 171 DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHC 250 (397)
T ss_dssp CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCC
T ss_pred CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCC
Confidence 78888887 777 8999999999999999999999999998765532110 11100 489999999999866
Q ss_pred CCc-eEEEEeCC
Q 018231 263 PRG-AMIFFRKG 273 (359)
Q Consensus 263 p~g-G~l~~~~~ 273 (359)
|.+ |+++++++
T Consensus 251 ~~~~g~~~~~~~ 262 (397)
T 3f9t_A 251 PIPSGGILFKDI 262 (397)
T ss_dssp CSSCEEEEESSG
T ss_pred CCCceEEEEeCH
Confidence 655 88888775
No 34
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=7.3e-23 Score=193.90 Aligned_cols=247 Identities=12% Similarity=0.100 Sum_probs=165.5
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCC----CCCCceeEEECCCh
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD----PEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~----~~~~~~~v~~tsG~ 122 (359)
+.+.+.+++..+++.+++++.+..... ++ ... ......++++++++++.. ++ +|++|+|+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~~---~~--------~~~-~~~~~~~~~~l~~~~~~~~~~~~~----~v~~~~g~ 68 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLGH---TS--------PEF-VSIFQRVLKNTRAVFKSAAASKSQ----PFVLAGSG 68 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCCT---TS--------HHH-HHHHHHHHHHHHHHTTCCGGGTCE----EEEEESCT
T ss_pred cceeecCCCcCchHHHHHHHhcccccc---CC--------HHH-HHHHHHHHHHHHHHhCCCCCCCCc----eEEEcCch
Confidence 457888998889999999887654331 11 111 112222556677776653 33 59999888
Q ss_pred H-HHHHHHHhhc---CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 018231 123 P-SNFQVYTALL---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (359)
Q Consensus 123 ~-a~~~~~~al~---~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~ 198 (359)
+ ++..++.++. ++||+|++++..+... .. ...+...|.+++.++.. + +++.+|+++|++.+++.++++
T Consensus 69 t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~---~~---~~~~~~~g~~~~~v~~~-~-~~~~~d~~~l~~~l~~~~~~~ 140 (385)
T 2bkw_A 69 TLGWDIFASNFILSKAPNKNVLVVSTGTFSD---RF---ADCLRSYGAQVDVVRPL-K-IGESVPLELITEKLSQNSYGA 140 (385)
T ss_dssp THHHHHHHHHHSCTTCSCCEEEEECSSHHHH---HH---HHHHHHTTCEEEEECCS-S-TTSCCCHHHHHHHHHHSCCSE
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCcchH---HH---HHHHHHcCCceEEEecC-C-CCCCCCHHHHHHHHhcCCCCE
Confidence 8 8888888887 8999998875322111 00 01233446666555431 4 567899999999997647899
Q ss_pred EEEc-CCC-CCChhhHHHHHHHHHHc--CCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 199 IVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 199 v~l~-~~n-~g~~~~l~~i~~la~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
|+++ ++| +|.+.|+++|.++|++| |+++|+|++|+.|..+.++...+ +|++++|+||+++||.| |+++++++
T Consensus 141 v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~G~G~~~~~~~ 217 (385)
T 2bkw_A 141 VTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWG---VDFALTASQKAIGAPAGLSISLCSSR 217 (385)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTT---CSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred EEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccC---ceEEEecCccccccCCcceEEEEcHH
Confidence 9888 666 89999999999999999 99999999999887765554444 89999999999998888 99999875
Q ss_pred cch-hcc-------CCcch-hhhHHH---hhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 274 VKE-INK-------QGKEV-FYDYEE---KINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 274 ~~~-~~~-------~g~~~-~~~~~~---~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
... .+. .+... ...+.. .+.. ......++++...++++.+|++.+.+
T Consensus 218 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~al~~~~~ 276 (385)
T 2bkw_A 218 FMDYALNDSKNGHVHGYFSSLRRWTPIMENYEA-GKGAYFATPPVQLINSLDVALKEILE 276 (385)
T ss_dssp HHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHT-TCCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCCceeecHHHHhhHHHhhhc-cCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 321 110 00000 000111 1111 01112378999999999999988764
No 35
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.90 E-value=4.2e-23 Score=195.36 Aligned_cols=239 Identities=17% Similarity=0.219 Sum_probs=167.0
Q ss_pred eeeCCC-CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 50 ELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 50 ~l~~~~-~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
.|+.+. .++++.|++++.+.+.+.| +.+...+..+ .........+++++++++|++++ +|++|+|++ ++..
T Consensus 4 yld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~~ 76 (384)
T 1eg5_A 4 YFDNNATTRVDDRVLEEMIVFYREKY--GNPNSAHGMG-IEANLHMEKAREKVAKVLGVSPS----EIFFTSCATESINW 76 (384)
T ss_dssp ECBTTTCCCCCHHHHHHHHHHHHTCC--CCTTCSSHHH-HHHHHHHHHHHHHHHHHHTSCGG----GEEEESCHHHHHHH
T ss_pred EEecCccCCCCHHHHHHHHHHHHhcC--CCCccccHHH-HHHHHHHHHHHHHHHHHcCCCCC----eEEEECCHHHHHHH
Confidence 444333 3679999999999887644 2222111000 11123333477899999998765 499999998 8888
Q ss_pred HHHhhc----CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 018231 128 VYTALL----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (359)
Q Consensus 128 ~~~al~----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~- 202 (359)
++.++. ++||+|++++++|+++..... .+...|.++..+ +.+ +++.+|+++|++.+++ ++++|+++
T Consensus 77 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~ 147 (384)
T 1eg5_A 77 ILKTVAETFEKRKRTIITTPIEHKAVLETMK-----YLSMKGFKVKYV--PVD-SRGVVKLEELEKLVDE-DTFLVSIMA 147 (384)
T ss_dssp HHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-----HHHHTTCEEEEC--CBC-TTSCBCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHhhhhhccCCCCEEEECCCCchHHHHHHH-----HHHhcCCEEEEE--ccC-CCCccCHHHHHHHhCC-CCeEEEEEC
Confidence 888887 899999999977766533221 112345555444 455 4578999999999987 89999888
Q ss_pred CCC-CCChhhHHHHHHHHHHcC--CEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCc--ch
Q 018231 203 ASA-YARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KE 276 (359)
Q Consensus 203 ~~n-~g~~~~l~~i~~la~~~~--~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~--~~ 276 (359)
++| +|...|+++|.++|+++| +++|+|++|++|..+.++... +.|++++|+||++ |+.| |+++++++. ..
T Consensus 148 ~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~~-g~~G~G~~~~~~~~~~~~ 223 (384)
T 1eg5_A 148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKL---EVDYASFSAHKFH-GPKGVGITYIRKGVPIRP 223 (384)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTT---CCSEEEEEGGGGT-SCTTCEEEEECTTSCCCC
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhc---CCCEEEecHHHhc-CCCceEEEEEcCCCcccc
Confidence 777 899999999999999999 999999999877665544333 3899999999974 6777 999998853 11
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018231 277 INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 320 (359)
Q Consensus 277 ~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~ 320 (359)
.+.++.. ......++++.+.++++.++++.+.
T Consensus 224 ~~~~~~~------------~~~~~~~~~~~~~~~a~~~al~~~~ 255 (384)
T 1eg5_A 224 LIHGGGQ------------ERGLRSGTQNVPGIVGAARAMEIAV 255 (384)
T ss_dssp SBCSSCT------------TTTTBCSCCCHHHHHHHHHHHHHHH
T ss_pred ccccCcc------------cccccCCCCChHHHHHHHHHHHHHH
Confidence 1111000 0011236888899999999998754
No 36
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.90 E-value=3.7e-23 Score=196.69 Aligned_cols=259 Identities=14% Similarity=0.069 Sum_probs=176.4
Q ss_pred cccccccChHHHHHHHHHHHHhhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHH
Q 018231 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 101 (359)
++++..+.+..+..+.+...+..+.|+|..+++. +++.+.+++.+.+.... .+| +...+..++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~l~~~la~~~ 76 (389)
T 1gd9_A 4 SDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THY------GPNIGLLELREAIAEKL 76 (389)
T ss_dssp HHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHH
T ss_pred hhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CCC------CCCCCcHHHHHHHHHHH
Confidence 3445556666666665544333467899877664 57899999998876521 122 22234567777777888
Q ss_pred HHHcCC--CCCCCcee-EEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC
Q 018231 102 LEAFRL--DPEKWGVN-VQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (359)
Q Consensus 102 a~~~g~--~~~~~~~~-v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (359)
.+.+|. +++ + |++|+|++ ++..++.+++++||+|+++++.|+++.. .+...|.++..++++.+
T Consensus 77 ~~~~g~~~~~~----~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~- 143 (389)
T 1gd9_A 77 KKQNGIEADPK----TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGGKPVEVPTYEE- 143 (389)
T ss_dssp HHHHCCCCCTT----TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTCEEEEEECCGG-
T ss_pred HHHhCCCCCCC----CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEeccCCc-
Confidence 777785 332 5 89999988 8888888889999999999977765432 33445666666654321
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc----CCCCCC-CC
Q 018231 178 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP-FE 247 (359)
Q Consensus 178 ~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~-~~ 247 (359)
+++.+|+++|++.+++ ++++|+++ ++| +|... ++++|.++|++||+++|+|++|+.+.... .+.... ..
T Consensus 144 ~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 222 (389)
T 1gd9_A 144 DEFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMF 222 (389)
T ss_dssp GTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCG
T ss_pred cCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCC
Confidence 2467899999999987 78988887 777 88665 58999999999999999999998765421 111111 12
Q ss_pred CceEEEeCCCCcCCCC--CceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 248 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 248 ~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+.|++++|+||+++.+ +.|++++++ ++.+.+..... ....+++.+...++.++|+.
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~ 280 (389)
T 1gd9_A 223 ERTITVNGFSKTFAMTGWRLGFVAAPS--------------WIIERMVKFQM-YNATCPVTFIQYAAAKALKD 280 (389)
T ss_dssp GGEEEEEESTTTTTCGGGCCEEEECCH--------------HHHHHHHHHHT-TTTCSCCHHHHHHHHHHHTC
T ss_pred CCEEEEecChhhcCCcccceEEEEECH--------------HHHHHHHHHHh-hhccCCCHHHHHHHHHHHhC
Confidence 4799999999988422 239999876 44444433221 12245566666777677654
No 37
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=3.2e-23 Score=194.58 Aligned_cols=248 Identities=10% Similarity=0.004 Sum_probs=169.6
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
+.+++.+++..+|+.+++++.+.+.+... ++.. .. ....++.+.+++++++++|++.++ +|++|+|++ ++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~~----~~-~~~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~al 74 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VISH----RS-KKFEEVYKTASDNLKTLLELPSNY---EVLFLASATEIW 74 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TSCT----TS-HHHHHHHHHHHHHHHHHTTCCTTE---EEEEESCHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-CcCC----CC-HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCchHHH
Confidence 45788899999999999988887765320 1111 11 223345556889999999985332 599999988 88
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CC
Q 018231 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~ 204 (359)
.+++.++++| .+++....+.++ .. ...+...|.+++.++ .+ +++.+|+++|+ +++ +|++|+++ ++
T Consensus 75 ~~~~~~l~~~--~~i~~~~~~~~~--~~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~--~~~-~~~~v~~~~~~ 140 (362)
T 3ffr_A 75 ERIIQNCVEK--KSFHCVNGSFSK--RF----YEFAGELGREAYKEE--AA-FGKGFYPADIT--VPA-DAEIICLTHNE 140 (362)
T ss_dssp HHHHHHHCSS--EEEEEECSHHHH--HH----HHHHHHTTCEEEEEE--CC-TTCCCCGGGCC--CCT-TCCEEEEESEE
T ss_pred HHHHHhccCC--cEEEEcCcHHHH--HH----HHHHHHhCCCeEEEe--cC-CCCCCCHHHHh--ccC-CccEEEEEcCC
Confidence 8899999888 444444322221 11 112233466666665 44 45789999998 665 89999998 77
Q ss_pred C-CCChhhHHHHHHHHHHc-CCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcch----h
Q 018231 205 A-YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE----I 277 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~-~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~----~ 277 (359)
| +|.+.|+++|.++|++| |+++|+|++|+.+..+.+... +|++++|+||++++|.| |++++++++.. .
T Consensus 141 nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-----~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~ 215 (362)
T 3ffr_A 141 TSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-----IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKAL 215 (362)
T ss_dssp TTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-----CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHH
T ss_pred CCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-----CcEEEEecccccCCCCceEEEEECHHHHHHhhhc
Confidence 7 89999999999999999 999999999988876654432 79999999999987888 89888876421 1
Q ss_pred ccCCcc-hh-hhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 278 NKQGKE-VF-YDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 278 ~~~g~~-~~-~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
..||+. .+ +++.............++++...++++.++++.+.++
T Consensus 216 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 262 (362)
T 3ffr_A 216 LAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQI 262 (362)
T ss_dssp HHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHc
Confidence 222221 11 1222221111112235889999999999999877654
No 38
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=4.8e-24 Score=201.77 Aligned_cols=260 Identities=10% Similarity=0.015 Sum_probs=173.0
Q ss_pred CCCCCCcHHHHHHHHhhhhccCCCCCCC-CcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEE-CCChH-HHHHHH
Q 018231 53 PSENFTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP-SNFQVY 129 (359)
Q Consensus 53 ~~~~~~~~~v~~al~~~~~~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~-tsG~~-a~~~~~ 129 (359)
+...+.|++|++++.+.+.+.++.+... .....+.+..+.++ .+|+.+++++|++++. +|+| |+|+| ++.+++
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~-~ar~~la~ll~~~~~~---evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIIN-NTENLVRELLAVPDNY---KVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCC---eEEEEcCchHHHHHHHH
Confidence 4566789999999999987644222111 00112333444444 5899999999996532 5888 57777 888788
Q ss_pred HhhcCC--CCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-
Q 018231 130 TALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (359)
Q Consensus 130 ~al~~~--Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n- 205 (359)
.+++.+ ||+|++....+.++ ++.. .++..|..+..+ +.+ +++..++++++..+++ +|++|.++ .+|
T Consensus 95 ~~l~~~~~Gd~v~~~~~g~~~~--~~~~----~a~~~G~~~~~~--~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~et~ 164 (377)
T 3e77_A 95 LNLIGLKAGRCADYVVTGAWSA--KAAE----EAKKFGTINIVH--PKL-GSYTKIPDPSTWNLNP-DASYVYYCANETV 164 (377)
T ss_dssp HHHGGGSTTCEEEECCCSHHHH--HHHH----HHTTTSEEEECS--CCC-SSSCSCCCGGGCCCCT-TCSCEEEESEETT
T ss_pred HhccCCCCCCeEEEEECCHHHH--HHHH----HHHHhCCceEEe--ccC-CCcCCCCChHHhccCC-CccEEEEeCccCc
Confidence 888765 99998776444333 2221 122335444333 343 3445667777767776 89998876 333
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCCcch
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEV 284 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~ 284 (359)
+|.+.|+ +|+++|+++++|++|++|..++++..++ ++++|+||++ ||+| |++++++++........+.
T Consensus 165 tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~-----~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p~ 233 (377)
T 3e77_A 165 HGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG-----VIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECPS 233 (377)
T ss_dssp TTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS-----EEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSCG
T ss_pred hheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC-----EEEEeccccc-CCCccEEEEEcHHHHhhccCCCCc
Confidence 7988888 4788999999999999999999987754 6899999999 7999 9999999753221111111
Q ss_pred hhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhhccccchhhh
Q 018231 285 FYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFV 340 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~~l~~~~~~~ 340 (359)
..++..... .....|||++..++++.+|++++.+++++++++++.......+.
T Consensus 234 ~~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~ 286 (377)
T 3e77_A 234 VLEYKVQAG---NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIY 286 (377)
T ss_dssp GGCHHHHHT---TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhh---cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 122222111 22346899999999999999999876566666655444444443
No 39
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.89 E-value=2.3e-23 Score=200.92 Aligned_cols=249 Identities=16% Similarity=0.133 Sum_probs=159.3
Q ss_pred cCceeeCCCC-CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-H
Q 018231 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (359)
Q Consensus 47 ~~i~l~~~~~-~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a 124 (359)
+.+.|..+.+ ++|+.+++++.+.+.+.+ +++...+ .......+..+.+++++++++|++++ +|++|+|++ +
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 90 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSSY-VAGRKAKDIINTARASLAKMIGGKPQ----DIIFTSGGTES 90 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCSS-HHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccCc-HHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEeCChHHH
Confidence 4567765544 678999999999886533 4443222 11112233444588999999999764 499999988 8
Q ss_pred HHHHHHhhc--------CCCCeeeecCCCCCcccCcccc---------ccccceeeeeeeeEEEecccCCCCCCCCHHHH
Q 018231 125 NFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQ---------TDTKKISAVSIFFETMPYRLNESTGYIDYDQL 187 (359)
Q Consensus 125 ~~~~~~al~--------~~Gd~Vl~~~~~~~~~~~~~~~---------~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l 187 (359)
+..++.+++ ++||+|+++.+.|.+....... .....+...|.+++.++ .+.+++.+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~--~~~~~~~~d~~~l 168 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVP--VSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEEC--CCTTTSSCCHHHH
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEe--cCcccCCcCHHHH
Confidence 887888775 5899999888666532100000 00001122355565554 4433578999999
Q ss_pred HHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcC----------CEEEEeccccccccccCCCCCCCCCceEEEeC
Q 018231 188 EKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK----------AIMLADMAHISGLVAAGVIPSPFEYADVVTTT 255 (359)
Q Consensus 188 ~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~----------~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s 255 (359)
++.+++ ++++|+++ ++| +|.+.|+++|.++|+++| +++|+|++|+.|..+.++... +.|++++|
T Consensus 169 ~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~---~~d~~~~s 244 (432)
T 3a9z_A 169 LAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL---GVDFLTIV 244 (432)
T ss_dssp HHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH---CCSEEEEE
T ss_pred HHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc---CCCEEEEe
Confidence 999987 89999888 667 899999999999999999 999999999887654433222 37999999
Q ss_pred CCCcCCCCCceEEEEeCCc-chh----ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 256 THKSLRGPRGAMIFFRKGV-KEI----NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 256 ~~K~l~gp~gG~l~~~~~~-~~~----~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+||++ ||+.|+++++++. ... ..+++. . .....++++...++++.+|++.+.+
T Consensus 245 ~~K~~-g~~~G~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~a~~aal~~~~~ 302 (432)
T 3a9z_A 245 GHKFY-GPRIGALYVRGVGKLTPLYPMLFGGGQ-----E-------RNFRPGTENTPMIAGLGKAADLVSE 302 (432)
T ss_dssp GGGTT-CCSCEEEEETTBTTTBCCCCSCCSSCG-----G-------GGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred hhHhc-CCcceEEEEccccccCCcCceeecCCc-----c-------ccccCCCcCHHHHHHHHHHHHHHHh
Confidence 99976 6778999998753 100 011110 0 0012378899999999999987654
No 40
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.89 E-value=2.9e-23 Score=195.66 Aligned_cols=262 Identities=10% Similarity=0.058 Sum_probs=172.3
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCc---ccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEE-CCCh
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR---YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~---~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~-tsG~ 122 (359)
+.+++.|++.++|++|+++|.+.+.+.+ +++.+. ...+.+..+.++ .+|+.+++++|++++. +|+| |+|+
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~~~~~~~~-~~r~~la~ll~~~~~~---~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTKVFEEVHF-GAQEKAKKLYELNDDY---EVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc---eEEEEcCcH
Confidence 5688999999999999999999887644 222221 112223444444 5899999999996432 5888 9988
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCC--CCHHHHHHHhhhhCCcEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY--IDYDQLEKSATLFRPKLI 199 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~d~e~l~~~i~~~~~k~v 199 (359)
| ++.+++.+++ +||++++....+-++ ++.. .+...|.+++.++. + +++. +++++ + +++ +|++|
T Consensus 79 T~a~n~~~~~~~-~~~~~~~i~~~~~~~--~~~~----~a~~~G~~v~~~~~--~-~~g~~~~~~~~-~--l~~-~t~lv 144 (361)
T 3m5u_A 79 SLQFAMIPMNLA-LNGVCEYANTGVWTK--KAIK----EAQILGVNVKTVAS--S-EESNFDHIPRV-E--FSD-NADYA 144 (361)
T ss_dssp HHHHHHHHHHHC-CSSCEEEEECSHHHH--HHHH----HHHHTTCCEEEEEE--C-TTTTSCSCCCC-C--CCT-TSSEE
T ss_pred HHHHHHHHHhcC-CCCeEEEEeCCHHHH--HHHH----HHHHcCCceEEEec--c-cCcCCCcCChh-h--cCC-CCCEE
Confidence 8 8887888888 899764332212122 1111 12233666766754 3 2232 45555 3 777 89998
Q ss_pred EEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcch
Q 018231 200 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (359)
Q Consensus 200 ~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (359)
.++ .+| +|.+.|. +++ +|+++++|++|++|..++++.. +|++++|+||++ ||+| |++++++++..
T Consensus 145 ~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~~-----~d~~~~s~~K~~-gp~G~g~l~~~~~~~~ 212 (361)
T 3m5u_A 145 YICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFSN-----IALFYGGVQKNA-GISGLSCIFIRKDMLE 212 (361)
T ss_dssp EEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCTT-----EEEEEEETTTTS-SCTTCEEEEEEHHHHH
T ss_pred EEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCccc-----CCEEEEechhcc-CCCccEEEEEcHHHHh
Confidence 886 333 6877552 444 4999999999999999998863 799999999999 7999 99999986532
Q ss_pred hccC-CcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhhccccchhhhhcc
Q 018231 277 INKQ-GKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFSLHVYPAFVSNQ 343 (359)
Q Consensus 277 ~~~~-g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~~l~~~~~~~~~~ 343 (359)
.+.. ..+...++..... ...++||||++.++++.+|++++.+++++++++++.......+...+
T Consensus 213 ~~~~~~~p~~~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L 277 (361)
T 3m5u_A 213 RSKNKQIPSMLNYLTHAE---NQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECI 277 (361)
T ss_dssp HHHTCCCCGGGCHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCceeehHHHhh---cCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 2111 1111112221111 12345899999999999999999886466766665544444444333
No 41
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.89 E-value=2.7e-22 Score=190.89 Aligned_cols=226 Identities=13% Similarity=0.096 Sum_probs=156.2
Q ss_pred cccccccChHHHHHHHHHHHH----hhcCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHH
Q 018231 24 NAPLEVVDPEIADIIEHEKAR----QWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (359)
++++..+.++.+..+.+...+ ..+.|+|..+++ ++++.+.+++.+.+.... .+| +...+..++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr~~i 77 (385)
T 1b5p_A 5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKY------APPAGIPELREAL 77 (385)
T ss_dssp CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHH
T ss_pred hhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHH
Confidence 444455555544444333222 235688887766 357889999888775422 122 2224456777778
Q ss_pred HHHHHHHcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecc
Q 018231 98 QKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (359)
Q Consensus 98 ~~~~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (359)
.+++.+.+|+ +++ +|++|+|++ ++..++.++++|||+|+++++.|.++. ..+...|.+++.++
T Consensus 78 a~~~~~~~g~~~~~~----~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~v~-- 143 (385)
T 1b5p_A 78 AEKFRRENGLSVTPE----ETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYP--------EMVRFAGGVVVEVE-- 143 (385)
T ss_dssp HHHHHHTTCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--------HHHHHTTCEEEEEE--
T ss_pred HHHHHHHhCCCCChH----HEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHH--------HHHHHcCCEEEEee--
Confidence 8888887786 343 499999999 888899999999999999996665432 23445576666665
Q ss_pred cCC-CCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc---CCCCCC
Q 018231 175 LNE-STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSP 245 (359)
Q Consensus 175 ~~~-~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~---~~~~~~ 245 (359)
.++ +++.+|+++|++.+++ ++++|+++ ++| ||.+. ++++|.++|++||+++|+|++++...... .+....
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 222 (385)
T 1b5p_A 144 TLPEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA 222 (385)
T ss_dssp CCGGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTC
T ss_pred cCcccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcC
Confidence 442 3578999999999987 78988887 888 88654 48899999999999999999987543311 111110
Q ss_pred CCCceEEEeCCCCcCCCC--CceEEEEeC
Q 018231 246 FEYADVVTTTTHKSLRGP--RGAMIFFRK 272 (359)
Q Consensus 246 ~~~~D~v~~s~~K~l~gp--~gG~l~~~~ 272 (359)
- +.++++.|++|+++.| +.|++++++
T Consensus 223 ~-~~~i~~~s~SK~~~~~G~RiG~~~~~~ 250 (385)
T 1b5p_A 223 P-EHTLTVNGAAKAFAMTGWRIGYACGPK 250 (385)
T ss_dssp T-TTEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred C-CCEEEEEechhhcCCcccceEEEEeCH
Confidence 0 3689999999987433 349999876
No 42
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.89 E-value=1.1e-23 Score=205.62 Aligned_cols=224 Identities=11% Similarity=0.035 Sum_probs=156.3
Q ss_pred HHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCe---eeecCCCCCcccCccccccccceeeeeeeeEE-
Q 018231 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDR---IMALDLPHGGHLSHGYQTDTKKISAVSIFFET- 170 (359)
Q Consensus 96 ~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~---Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 170 (359)
.+++++++++|++++ +|++|+|++ ++..++.++++|||+ |++..++|++...++... +...|.++..
T Consensus 115 ~l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~----~~~~G~~~~~~ 186 (465)
T 3e9k_A 115 SIVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQ----LQLHGLNIEES 186 (465)
T ss_dssp HHHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHH----HHHTTCCHHHH
T ss_pred HHHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHH----HHHcCCcceee
Confidence 366899999999875 499999999 777788898877665 999998887654332211 1222333210
Q ss_pred -Eec-ccCCCCCCCCHHHHHHHhhh--hCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCC
Q 018231 171 -MPY-RLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (359)
Q Consensus 171 -v~~-~~~~~~~~~d~e~l~~~i~~--~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~ 244 (359)
+.+ +.+ +++.+|+++|++.+++ .++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.|..+.++...
T Consensus 187 ~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~ 265 (465)
T 3e9k_A 187 MRMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW 265 (465)
T ss_dssp EEEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH
T ss_pred eEEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc
Confidence 111 233 5678999999999973 278899888 777 899999999999999999999999999999988766555
Q ss_pred CCCCceEEEeCCCCcCC-CCCc-eEEEEeCCcchhc---cCCcchhhhHHHhh--c----cccCCC--CCCCCcHHHHHH
Q 018231 245 PFEYADVVTTTTHKSLR-GPRG-AMIFFRKGVKEIN---KQGKEVFYDYEEKI--N----QAVFPG--LQGGPHNHTITG 311 (359)
Q Consensus 245 ~~~~~D~v~~s~~K~l~-gp~g-G~l~~~~~~~~~~---~~g~~~~~~~~~~~--~----~~~~~~--~~gt~~~~~i~a 311 (359)
. +|++++|+||+++ ||.| |++++++++...+ ..|+.+. .....+ . ...... ..||+++..+++
T Consensus 266 ~---~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 341 (465)
T 3e9k_A 266 G---VDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGH-ELSTRFKMDNKLQLIPGVCGFRISNPPILLVCS 341 (465)
T ss_dssp T---CCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGB-CHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHH
T ss_pred C---CCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCC-CCCcccccCCCcCcCCChHHhccCCccHHHHHH
Confidence 5 8999999999995 7777 9999988653221 1221110 111111 0 000011 138999999999
Q ss_pred HHHHHHHHhccccchhHhhhcc
Q 018231 312 LAVALKQVCTLITFSHIHVFSL 333 (359)
Q Consensus 312 l~~Al~~~~~~~~~~~~~~~~l 333 (359)
+.+|++.+.+. .+.+++.+..
T Consensus 342 ~~aal~~~~~~-~~~~~~~~~~ 362 (465)
T 3e9k_A 342 LHASLEIFKQA-TMKALRKKSV 362 (465)
T ss_dssp HHHHHHHHHHH-CHHHHHHHHH
T ss_pred HHHHHHHHHHc-CHHHHHHHHH
Confidence 99999987753 3455544433
No 43
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.88 E-value=5.4e-22 Score=188.89 Aligned_cols=245 Identities=11% Similarity=0.044 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHhhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC--CC
Q 018231 34 IADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DP 109 (359)
Q Consensus 34 ~~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~ 109 (359)
++....+.....++.|+|..+++. +++.+++++.+.+.+.. .+ |+...+..++++.+.+++.+.+|. ++
T Consensus 19 ~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~~ia~~~~~~~g~~~~~ 91 (391)
T 3h14_A 19 VMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LG------YTVALGLPALRQRIARLYGEWYGVDLDP 91 (391)
T ss_dssp HHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCCG
T ss_pred HHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCChHHHHHHHHHHHHHHhCCCCCH
Confidence 334333333333577999887774 47889999998876521 12 232244567777788888888785 44
Q ss_pred CCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHH
Q 018231 110 EKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (359)
Q Consensus 110 ~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~ 188 (359)
+ +|++|+|++ ++..++.+++++||+|++..+.|.++. ..+...|.++..+++..+ .++.+|+++++
T Consensus 92 ~----~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~ 158 (391)
T 3h14_A 92 G----RVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYR--------QILRALGLVPVDLPTAPE-NRLQPVPADFA 158 (391)
T ss_dssp G----GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTCEEEEEECCGG-GTTSCCHHHHT
T ss_pred H----HEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHH--------HHHHHcCCEEEEeecCcc-cCCCCCHHHHH
Confidence 3 599999999 888899999999999999996665443 234455766666654322 34678999988
Q ss_pred HHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccC-CCCCCCCCceEEEeCCCCcCC-
Q 018231 189 KSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSLR- 261 (359)
Q Consensus 189 ~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~-~~~~~~~~~D~v~~s~~K~l~- 261 (359)
+. ++++|+++ ++| +|...+ +++|.++|++||+++|+|++|+....... .....+.+.++++.|++|+++
T Consensus 159 ~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 234 (391)
T 3h14_A 159 GL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSM 234 (391)
T ss_dssp TS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCC
T ss_pred hc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCC
Confidence 65 68998887 777 886665 88899999999999999999975332211 000111236789999999883
Q ss_pred -CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 262 -GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 262 -gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
|.+.|+++++++ +.+.+..... ...++++.+..+++.++++
T Consensus 235 ~G~r~G~~~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 235 TGWRVGWMVVPED--------------QVRVVERIAQ-NMFICAPHASQVAALAALD 276 (391)
T ss_dssp TTSCCEEEECCGG--------------GHHHHHHHHH-HTTCCCCHHHHHHHHHHTT
T ss_pred ccceeEEEEeCHH--------------HHHHHHHHHh-hhccCCCHHHHHHHHHHhC
Confidence 333399998773 3333322111 1224666677666666665
No 44
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.88 E-value=3.1e-22 Score=190.21 Aligned_cols=260 Identities=11% Similarity=0.117 Sum_probs=177.1
Q ss_pred ccccccccChHHHHHHHHHHHHhhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (359)
+++++..+.+.++..+.+.. ...+.|+|..+.+. +++.+.+++.+.+.... .+| +...+..++++++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~l~~~la~~ 79 (386)
T 1u08_A 8 PQSKLPQLGTTIFTQMSALA-QQHQAINLSQGFPDFDGPRYLQERLAHHVAQGA-NQY------APMTGVQALREAIAQK 79 (386)
T ss_dssp CCCSCCCCCCCHHHHHHHHH-HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHH
T ss_pred cchhhhcCCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHhhc-cCC------CCCCCCHHHHHHHHHH
Confidence 35667778888887776643 33567899877653 67899999998876421 122 2223456777778888
Q ss_pred HHHHcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC
Q 018231 101 ALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (359)
Q Consensus 101 ~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (359)
+++.+|. +++. +|++|+|++ ++..++.+++++||+|+++++.|+++.. .+...|.++..++ .+.
T Consensus 80 l~~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~ 146 (386)
T 1u08_A 80 TERLYGYQPDADS---DITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGGIVKRMA--LQP 146 (386)
T ss_dssp HHHHHSCCCCTTT---TEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CCT
T ss_pred HHHHhCCCCCCCC---CEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEee--cCc
Confidence 8887885 4441 399999999 8888889999999999999977765432 3344566565554 443
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccccC-CCC-CCC---C
Q 018231 178 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPF---E 247 (359)
Q Consensus 178 ~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~~-~~~-~~~---~ 247 (359)
+++.+|+++|++.+++ ++++|+++ ++| +|... ++++|.++|++||+++|+|++|+....... ... ..+ .
T Consensus 147 ~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 225 (386)
T 1u08_A 147 PHFRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLR 225 (386)
T ss_dssp TTCCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHH
T ss_pred ccCcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCcc
Confidence 3578999999999976 88999887 777 88665 478999999999999999999975332111 000 011 1
Q ss_pred CceEEEeCCCCcCCCC--CceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018231 248 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 248 ~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
+.|++++|++|+++.+ +.|++++++ ++.+.+...... ...+++.+...++.++|+..
T Consensus 226 ~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~ 284 (386)
T 1u08_A 226 ERAVAVSSFGKTYHMTGWKVGYCVAPA--------------PISAEIRKVHQY-LTFSVNTPAQLALADMLRAE 284 (386)
T ss_dssp TTEEEEEEHHHHTTCGGGCCEEEECCH--------------HHHHHHHHHHHH-HTSSCCHHHHHHHHHHHHHC
T ss_pred CcEEEEecchhhcCCcccceEEEEcCH--------------HHHHHHHHHHHh-hccCCChHHHHHHHHHHhCC
Confidence 4799999999988522 249999876 444433321110 12344556667777777654
No 45
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.88 E-value=6.5e-22 Score=190.74 Aligned_cols=262 Identities=11% Similarity=0.078 Sum_probs=178.6
Q ss_pred ccccccccChHHHHHHHHHHHHhhcCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (359)
+++++..+++.++..+.+.. ...+.|+|..+.+ .+++.+++++.+.+.... .....|+...+..++++++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~l~~~la~~ 89 (429)
T 1yiz_A 15 LPKRYQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPD----PLANQYTRGFGHPRLVQALSKL 89 (429)
T ss_dssp SSSSCCCCTTCHHHHHHHHH-HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSC----GGGGSCCCSSCCHHHHHHHHHH
T ss_pred hhHHhhhCCchHHHHHHHHh-ccCCEEEecCCCCCCCCCHHHHHHHHHHHhccc----cCccCCCCCCCcHHHHHHHHHH
Confidence 35677778888888776643 3456789987765 367999999998876410 0111233323456777777788
Q ss_pred HHHHcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC
Q 018231 101 ALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (359)
Q Consensus 101 ~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (359)
+.+.+|. +++. +|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .+.
T Consensus 90 l~~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~ 156 (429)
T 1yiz_A 90 YSQLVDRTINPMT---EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGGIPRFIP--LKP 156 (429)
T ss_dssp HHHHHTSCCCTTT---SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CBC
T ss_pred HHHHhCCCCCCcC---CEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--CCc
Confidence 8887785 4441 399999998 8888899999999999999966665422 3334566665565 332
Q ss_pred C---------CCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc----
Q 018231 178 S---------TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA---- 239 (359)
Q Consensus 178 ~---------~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~---- 239 (359)
+ ++.+|+++|++.+++ ++++|+++ ++| +|.+. ++++|.++|++||+++|+|++|+......
T Consensus 157 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 235 (429)
T 1yiz_A 157 NKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHI 235 (429)
T ss_dssp CCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCC
T ss_pred ccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCc
Confidence 2 467899999999976 88998887 777 88666 58999999999999999999997533211
Q ss_pred CCCCCC-CCCceEEEeCCCCcCCCC--CceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHH
Q 018231 240 GVIPSP-FEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 316 (359)
Q Consensus 240 ~~~~~~-~~~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al 316 (359)
.+...+ ..+.|+++.|++|+++.+ +.|++++++ ++.+.+..... ....+.+.+..+++.++|
T Consensus 236 ~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l 300 (429)
T 1yiz_A 236 RICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE--------------ALLKNLQMVHQ-NCVYTCATPIQEAIAVGF 300 (429)
T ss_dssp CGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH--------------HHHHHHHHHHH-TTTCCCCHHHHHHHHHHH
T ss_pred ChhhccCCcCceEEEecchhccCCCCcceEEEEeCH--------------HHHHHHHHHHh-hcccCCChHHHHHHHHHH
Confidence 111111 124799999999987522 249999876 44444332211 122355667777777888
Q ss_pred HH
Q 018231 317 KQ 318 (359)
Q Consensus 317 ~~ 318 (359)
+.
T Consensus 301 ~~ 302 (429)
T 1yiz_A 301 ET 302 (429)
T ss_dssp HH
T ss_pred hc
Confidence 76
No 46
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.88 E-value=2e-22 Score=191.96 Aligned_cols=230 Identities=13% Similarity=0.101 Sum_probs=158.8
Q ss_pred hccccccccChHHHHHHHHHHHH----hhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHH
Q 018231 22 QLNAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (359)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 95 (359)
|++++++.+.++.+..+.+...+ .++.|+|..+++. +++.+.+++.+.+.... .+ |+......++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~ 85 (389)
T 1o4s_A 13 MVSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGE-VK------YTDPRGIYELRE 85 (389)
T ss_dssp -CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCC-CC------CCCTTCCHHHHH
T ss_pred HHHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHH
Confidence 34555555655544433332222 2357889877663 57899999988876521 12 232244577777
Q ss_pred HHHHHHHHHcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEe
Q 018231 96 LCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (359)
Q Consensus 96 ~~~~~~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (359)
++.+++.+.+|+ +++ +|++|+|++ ++..++.+++++||+|+++++.|.++.. .+...|.++..++
T Consensus 86 ~la~~~~~~~g~~~~~~----~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~ 153 (389)
T 1o4s_A 86 GIAKRIGERYKKDISPD----QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGGTVNVVE 153 (389)
T ss_dssp HHHHHHHHHHTCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCCCHH----HEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe
Confidence 777888777786 443 499999999 8888899999999999999977765432 3344566665565
Q ss_pred cccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc---CCCCC
Q 018231 173 YRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPS 244 (359)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~---~~~~~ 244 (359)
++.+ +++.+|+++|++.+++ ++++|+++ ++| +|...| +++|.++|+++|+++|+|++|+.+.... .+...
T Consensus 154 ~~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~ 231 (389)
T 1o4s_A 154 TFMS-KNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDV 231 (389)
T ss_dssp CCGG-GTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHH
T ss_pred cCCc-cCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhc
Confidence 3221 3568899999999987 78988887 777 887654 8999999999999999999998655421 11000
Q ss_pred C-CCCceEEEeCCCCcCCCC--CceEEEEeC
Q 018231 245 P-FEYADVVTTTTHKSLRGP--RGAMIFFRK 272 (359)
Q Consensus 245 ~-~~~~D~v~~s~~K~l~gp--~gG~l~~~~ 272 (359)
. ..+.|++++|+||+++.+ +.|++++++
T Consensus 232 ~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~ 262 (389)
T 1o4s_A 232 SEGFDRIVYINGFSKSHSMTGWRVGYLISSE 262 (389)
T ss_dssp CSSSTTEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred CCCCCcEEEEeechhhcCCcccceEEEEeCH
Confidence 0 024799999999998422 249999876
No 47
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.88 E-value=3e-22 Score=192.09 Aligned_cols=230 Identities=10% Similarity=0.068 Sum_probs=162.4
Q ss_pred ccccccccChHHHHHHHHHHHHhhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (359)
++++++.+.+..+..+.+.. ...+.|+|..+.+. +++.+.+++.+.+.+.. .+| +...+..++++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~l~~~la~~ 74 (411)
T 2o0r_A 3 TVSRLRPYATTVFAEMSALA-TRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGV-NQY------PPGPGSAPLRRAIAAQ 74 (411)
T ss_dssp CCGGGGGGSSCHHHHHHHHH-HTTTCEESSCSSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHH
T ss_pred hhhHhHhcCccHHHHHHHHh-hcCCeeeccCcCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHHHHH
Confidence 35566777788887777643 34467889877653 57899999999886521 122 2224456777778888
Q ss_pred HHHHcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC
Q 018231 101 ALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (359)
Q Consensus 101 ~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (359)
+.+.+|+ +++. +|++|+|++ ++..++.+++++||+|+++++.|+++.. .+...|.++..++++.+.
T Consensus 75 ~~~~~g~~~~~~~---~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~~~~~~ 143 (411)
T 2o0r_A 75 RRRHFGVDYDPET---EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGAHRVTVPLVPDG 143 (411)
T ss_dssp HHHHHCCCCCTTT---SEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEET
T ss_pred HHHHcCCCCCCCc---eEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCEEEEeeccccc
Confidence 8888885 3431 399999998 8888889999999999999977776532 233456666556532210
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc----CCCCCC-CC
Q 018231 178 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP-FE 247 (359)
Q Consensus 178 ~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~-~~ 247 (359)
.++.+|+++|++.+++ ++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|+.+.... .+.... ..
T Consensus 144 ~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 222 (411)
T 2o0r_A 144 RGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMA 222 (411)
T ss_dssp TEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTG
T ss_pred cCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCC
Confidence 1456899999999987 88999887 777 886654 6899999999999999999997654321 111111 12
Q ss_pred CceEEEeCCCCcCCCC--CceEEEEeC
Q 018231 248 YADVVTTTTHKSLRGP--RGAMIFFRK 272 (359)
Q Consensus 248 ~~D~v~~s~~K~l~gp--~gG~l~~~~ 272 (359)
+.|++++|++|+++.+ +.|++++++
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~ 249 (411)
T 2o0r_A 223 ERTITISSAAKMFNCTGWKIGWACGPA 249 (411)
T ss_dssp GGEEEEEEHHHHTTCTTTCEEEEECCH
T ss_pred CCEEEEeechhhcCCccceEEEEeeCH
Confidence 4799999999988523 349998876
No 48
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.88 E-value=2.2e-22 Score=190.87 Aligned_cols=255 Identities=16% Similarity=0.141 Sum_probs=171.5
Q ss_pred ccccccccChHHHHHHHHHHHHhhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (359)
++++++.+.++.+..+.+.. ...+.|+|..+.+. +++.+.+++.+.+.. . ..| +......+ +++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~-~~y------~~~~~~~~----l~~~ 69 (381)
T 1v2d_A 3 LHPRTEAAKESIFPRMSGLA-QRLGAVNLGQGFPSNPPPPFLLEAVRRALGR-Q-DQY------APPAGLPA----LREA 69 (381)
T ss_dssp CCGGGGGC---CHHHHHHHH-HHHTCEECCCCSCSSCCCHHHHHHHHHHTTT-S-CSC------CCTTCCHH----HHHH
T ss_pred hhhhhhhcCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCC------CCCCCCHH----HHHH
Confidence 45566677777777766643 33567899877663 578999999988754 1 122 22223344 4477
Q ss_pred HHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCC
Q 018231 101 ALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (359)
Q Consensus 101 ~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (359)
+++++++++++ |++|+|++ ++..++.+++++||+|+++++.|+++.. .+...|.++..++.+..+++
T Consensus 70 la~~~~~~~~~----v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~~~~ 137 (381)
T 1v2d_A 70 LAEEFAVEPES----VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAKARLVRLDLTPEG 137 (381)
T ss_dssp HHHHHTSCGGG----EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETTE
T ss_pred HHHhcCCChhh----EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEeCCCCCcc
Confidence 88889987653 99999999 8888888999999999999977766432 23345666655654210234
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccc---ccCCCCCCCCCceE
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLV---AAGVIPSPFEYADV 251 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~---~~~~~~~~~~~~D~ 251 (359)
+.+|+++|++.+++ ++++|+++ ++| +|.+. ++++|.++|++||+++|+|++|+.+.. +.++... ..+.|+
T Consensus 138 ~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~ 215 (381)
T 1v2d_A 138 FRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APERTF 215 (381)
T ss_dssp EECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEE
T ss_pred CCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh-cCCCEE
Confidence 67899999999976 78999887 777 88654 488999999999999999999975443 1111100 124899
Q ss_pred EEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018231 252 VTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 252 v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
+++|+||+++ |.+.|+++++++ +.+.+..... ....+++.+..+++.++|+..
T Consensus 216 ~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~ 270 (381)
T 1v2d_A 216 TVGSAGKRLEATGYRVGWIVGPKE--------------FMPRLAGMRQ-WTSFSAPTPLQAGVAEALKLA 270 (381)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCTT--------------THHHHHHHHH-HHTSSCCHHHHHHHHHHHHHH
T ss_pred EEeechhhcCCcccceEEEEeCHH--------------HHHHHHHHHh-hcccCCCcHHHHHHHHHHhCc
Confidence 9999999884 333499999774 3332221100 012355667777788888765
No 49
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.88 E-value=4.5e-22 Score=189.01 Aligned_cols=238 Identities=14% Similarity=0.135 Sum_probs=163.5
Q ss_pred cCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeEEECCCh
Q 018231 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g--~~~~~~~~~v~~tsG~ 122 (359)
+.|+|..+++ ++++.+++++.+.+.+.. .+| +.. ..++++.+++++++.+| ++++ +|++|+|+
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~i~~~~g~ 94 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAA-FGY------ESV--PAEYYKAVADWEEIEHRARPKED----WCVFASGV 94 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCC-CCC------BCC--CHHHHHHHHHHHHHHHSCCCCGG----GEEEESCH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCc-CCC------CCC--CHHHHHHHHHHHHHHhCCCCCHH----HEEECCCH
Confidence 5788877665 468999999999876521 122 211 35677778899999998 4454 59999998
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++++....++.+|+++|++++++.++++|++
T Consensus 95 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i 166 (391)
T 3dzz_A 95 VPAISAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVF 166 (391)
T ss_dssp HHHHHHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEE
Confidence 8 8888999999999999999977765432 334456666555543222345689999999998338999888
Q ss_pred c-CCC-CCCh---hhHHHHHHHHHHcCCEEEEecccccccccc----CCCCCCCCCce--EEEeCCCCcCC--CCCceEE
Q 018231 202 G-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPFEYAD--VVTTTTHKSLR--GPRGAMI 268 (359)
Q Consensus 202 ~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~~~~~D--~v~~s~~K~l~--gp~gG~l 268 (359)
+ ++| +|.+ .++++|.++|++||+++|+|++|+...... ..........| ++++|+||+++ |.+.|++
T Consensus 167 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~ 246 (391)
T 3dzz_A 167 CNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA 246 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEE
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEE
Confidence 7 777 8866 679999999999999999999997544321 11111101145 99999999873 4444999
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+++++ ++.+.+..........+++.+..+++.++++.
T Consensus 247 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (391)
T 3dzz_A 247 IIPNP-------------DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE 283 (391)
T ss_dssp ECCSH-------------HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH
T ss_pred EECCH-------------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 98743 44444332211112235666777777777765
No 50
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.87 E-value=6.1e-22 Score=187.14 Aligned_cols=228 Identities=13% Similarity=0.042 Sum_probs=159.3
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeEEECCC
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~~~v~~tsG 121 (359)
++.|+|..+.+. +++.+.+++.+.+.... .+| +......++++++.+++.+.+|. +++ +|++|+|
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~~~~~l~~~la~~~~~~~g~~~~~~----~v~~~~g 97 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-THY------TDSRGILELREKISELYKDKYKADIIPD----NIIITGG 97 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHHHHHSSCCCCGG----GEEEESS
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cCC------CCCCCCHHHHHHHHHHHHHHhCCCCChh----hEEECCC
Confidence 356888877763 57899999988876521 122 22244567777788888877775 443 5999999
Q ss_pred hH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 018231 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (359)
Q Consensus 122 ~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~ 200 (359)
++ ++..++.+++++||+|+++++.|+++.. .+...|.++..++ +|+++|++.+++ ++++|+
T Consensus 98 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~---------~d~~~l~~~l~~-~~~~v~ 159 (370)
T 2z61_A 98 SSLGLFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGAKPVFCD---------FTVESLEEALSD-KTKAII 159 (370)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC---------SSHHHHHHHCCS-SEEEEE
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEeC---------CCHHHHHHhccc-CceEEE
Confidence 99 8888899999999999999977765432 3334565554442 589999999987 789888
Q ss_pred Ec-CCC-CCChhhHHHHHHHHHHcCCEEEEecccccccccc---CCCCC-CCCCceEEEeCCCCcCCCC--CceEEEEeC
Q 018231 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GVIPS-PFEYADVVTTTTHKSLRGP--RGAMIFFRK 272 (359)
Q Consensus 201 l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~---~~~~~-~~~~~D~v~~s~~K~l~gp--~gG~l~~~~ 272 (359)
++ ++| +|...+.+ |.++|++||+++|+|++|+.+.... ..... ...+.|++++|+||+++.| +.|++++++
T Consensus 160 ~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 238 (370)
T 2z61_A 160 INSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND 238 (370)
T ss_dssp EESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred EcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH
Confidence 87 777 89999999 9999999999999999998655421 11111 0124799999999998422 249999887
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 273 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.+.+...... ..++++.+..+++.++|+.
T Consensus 239 --------------~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~ 269 (370)
T 2z61_A 239 --------------EIIEAILKLQQN-LFISAPTISQYAALKAFEK 269 (370)
T ss_dssp --------------HHHHHHHHHHHH-HTSSSCHHHHHHHGGGGSH
T ss_pred --------------HHHHHHHHHHhh-cccCCCHHHHHHHHHHHhc
Confidence 344433221111 1235667777777677654
No 51
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.87 E-value=2.1e-21 Score=182.90 Aligned_cols=249 Identities=14% Similarity=0.053 Sum_probs=168.8
Q ss_pred ccccccccChHHHHHHHHHHHHh---hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (359)
+++.++.+.++..........+. .+.|+|..++++ +++.+++++.+.+.... +|+ . ....+ +
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~------~-~~~~~----l 72 (363)
T 3ffh_A 6 WKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVETE--IYP------D-GWASS----L 72 (363)
T ss_dssp CCGGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSCCC--BC-----------CHH----H
T ss_pred hhHHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCCCCCHHHHHHHHHHHHHhh--cCC------C-cchHH----H
Confidence 45556666676554433332222 356999888775 58999999988664311 222 1 12233 5
Q ss_pred HHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 98 QKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 98 ~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
++++++++|++++ +|++|+|++ ++..++.+++++||+|+++++.|.++ ...+...|.++..++ .+
T Consensus 73 r~~la~~~~~~~~----~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~--------~~~~~~~g~~~~~v~--~~ 138 (363)
T 3ffh_A 73 RKEVADFYQLEEE----ELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQY--------RQNALIEGAEVREIP--LL 138 (363)
T ss_dssp HHHHHHHHTCCGG----GEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHH--------HHHHHHHTCEEEEEE--CC
T ss_pred HHHHHHHhCCChh----hEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHH--------HHHHHHcCCEEEEec--CC
Confidence 5888999998775 499999999 88888899999999999999655543 224445576665564 44
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHc--CCEEEEeccccccccc---cCCCCCCCCCc
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVA---AGVIPSPFEYA 249 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~--~~~vivD~a~~~g~~~---~~~~~~~~~~~ 249 (359)
+++.+|++++++.+++ ++++|+++ ++| +|...|++++.++++.+ |+++|+|++|+..... .........+.
T Consensus 139 -~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 216 (363)
T 3ffh_A 139 -QDGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKN 216 (363)
T ss_dssp -TTSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTT
T ss_pred -CCCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCC
Confidence 3688999999999987 89999988 777 89999999999998877 9999999999744321 00000000124
Q ss_pred eEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 250 D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
++++.|++|+++ |.+.|++++++ ++.+.+..... ..+++....+++.++++
T Consensus 217 ~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~---~~~~~~~~~~~~~~~l~ 269 (363)
T 3ffh_A 217 LIITRTFSKIYGLASARVGYGIADK--------------EIIRQLNIVRP---PFNTTSIGQKLAIEAIK 269 (363)
T ss_dssp EEEEEESSSTTCCSSCCCEEEEECH--------------HHHHHHHHTCC---SCCCBHHHHHHHHHHHH
T ss_pred EEEEeechhhhcCchhceeeeecCH--------------HHHHHHHHhCC---CCCCCHHHHHHHHHHhc
Confidence 688899999874 23339999866 55555544322 34678888888888885
No 52
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.87 E-value=2.3e-21 Score=184.26 Aligned_cols=208 Identities=14% Similarity=0.052 Sum_probs=148.1
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
++.|+|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++.+.+++.+.+|++.+. .+|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~ 100 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TR------YGPAAGEPRLREAIAQKLQRDNGLCYGA--DNILVTNGGK 100 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHH
Confidence 357888877663 57899999988875421 12 2333445778877888888888863211 2599999988
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
++..++.+++++||+|+++++.|+++.. .+...|.+++.++.+.+ +++.+|+++|++.+++ ++++|+++
T Consensus 101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~~~ 170 (388)
T 1j32_A 101 QSIFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEGTPVILPTTVE-TQFKVSPEQIRQAITP-KTKLLVFN 170 (388)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEECCCGG-GTTCCCHHHHHHHCCT-TEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCEEEEecCCcc-cCCCCCHHHHHHhcCc-CceEEEEe
Confidence 8888999999999999999977765432 33345666655653221 2578999999999987 88988887
Q ss_pred -CCC-CCCh---hhHHHHHHHHHHcCCEEEEeccccccccccCCC--CCCC----CCceEEEeCCCCcCCCC--CceEEE
Q 018231 203 -ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVI--PSPF----EYADVVTTTTHKSLRGP--RGAMIF 269 (359)
Q Consensus 203 -~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~--~~~~----~~~D~v~~s~~K~l~gp--~gG~l~ 269 (359)
++| +|.+ .++++|.++|+++|+++|+|++|+......... ...+ .+.|+++.|+||+++.+ +.|+++
T Consensus 171 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 250 (388)
T 1j32_A 171 TPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250 (388)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence 777 8866 458999999999999999999987644321100 0011 13789999999988422 249999
Q ss_pred EeC
Q 018231 270 FRK 272 (359)
Q Consensus 270 ~~~ 272 (359)
+++
T Consensus 251 ~~~ 253 (388)
T 1j32_A 251 GPV 253 (388)
T ss_dssp CCH
T ss_pred eCH
Confidence 877
No 53
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.87 E-value=7.1e-22 Score=190.20 Aligned_cols=239 Identities=13% Similarity=0.099 Sum_probs=168.2
Q ss_pred hcCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeEEECCC
Q 018231 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (359)
Q Consensus 46 ~~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~~~v~~tsG 121 (359)
++.|+|..+++ ++++.|++++.+.+.+.. .+|+. ...++++.+++++++.+|. +++ .|++|+|
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~--------~~~~l~~~l~~~l~~~~g~~~~~~----~v~~~~g 127 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREHI-FGYNY--------FNDDLYQAVIDWERKEHDYAVVKE----DILFIDG 127 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHCC-SSCBC--------CCHHHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcCC-cCCCC--------CCHHHHHHHHHHHHHHhCCCCCHH----HEEEcCC
Confidence 45788876665 468999999999876521 12221 1256677788999999984 444 4999999
Q ss_pred hH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 018231 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (359)
Q Consensus 122 ~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~ 200 (359)
++ ++..++.+++++||+|++..+.|.++.. .+...|.++..+++.....++.+|+++|++++++.++++|+
T Consensus 128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vi 199 (421)
T 3l8a_A 128 VVPAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYL 199 (421)
T ss_dssp HHHHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEE
Confidence 99 9998999999999999999966655422 34445666666665422245678999999999844899998
Q ss_pred Ec-CCC-CCCh---hhHHHHHHHHHHcCCEEEEecccccccccc----CCCCCCC--CCceEEEeCCCCcCC--CCCceE
Q 018231 201 AG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF--EYADVVTTTTHKSLR--GPRGAM 267 (359)
Q Consensus 201 l~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~~--~~~D~v~~s~~K~l~--gp~gG~ 267 (359)
++ ++| +|.+ .++++|+++|++||+++|+|++|+...... .+..... .+.++++.|++|+|+ |.+.|+
T Consensus 200 l~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~ 279 (421)
T 3l8a_A 200 LCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSF 279 (421)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEE
T ss_pred ECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEe
Confidence 88 777 8866 679999999999999999999996533221 1111110 135689999999884 334499
Q ss_pred EEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 268 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 268 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++++++ ++.+.+.........+++|.++.+|+.++++.
T Consensus 280 ~~~~~~-------------~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~ 317 (421)
T 3l8a_A 280 AIIQNE-------------SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY 317 (421)
T ss_dssp EECCSH-------------HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred EEcCCH-------------HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence 998843 44444433221223457888888888888875
No 54
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.87 E-value=6.5e-22 Score=190.13 Aligned_cols=265 Identities=11% Similarity=0.032 Sum_probs=179.8
Q ss_pred ccccccccChHHHHHHHHHHHHhhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (359)
++++++.++++.+..+.+.. ...+.|+|..+++. +++.+++++.+.+.+.. ....|+...+..++++.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-----~~~~y~~~~g~~~lr~~la~~ 79 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKLA-SEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDF-----MLNQYTKTFGYPPLTKILASF 79 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHHH-HTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCG-----GGGSCCCTTCCHHHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHHh-hcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCC-----ccCCCCCCCCCHHHHHHHHHH
Confidence 45667778888777776643 34578999877763 78999999999876521 001123223456777778888
Q ss_pred HHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc----
Q 018231 101 ALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---- 175 (359)
Q Consensus 101 ~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---- 175 (359)
+.+.+|.+.+. ..+|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..+++..
T Consensus 80 ~~~~~g~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~ 150 (422)
T 3fvs_A 80 FGELLGQEIDP-LRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGGRPVFVSLKPGPIQ 150 (422)
T ss_dssp HHHHHTCCCCH-HHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECBCCCCC
T ss_pred HHHhhCCCCCC-CCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCCEEEEEeccccccc
Confidence 88888864210 01499999999 8888899999999999999977665422 3344566665665432
Q ss_pred C-----CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc----CC
Q 018231 176 N-----ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GV 241 (359)
Q Consensus 176 ~-----~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~----~~ 241 (359)
+ ..++.+|++++++.+++ ++++|+++ ++| +|... ++++|.++|++||+++|+|++|+...... .+
T Consensus 151 ~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 229 (422)
T 3fvs_A 151 NGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229 (422)
T ss_dssp SSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred ccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCCh
Confidence 0 12457899999999987 89999887 777 88666 68999999999999999999997533221 11
Q ss_pred CCCCC-CCceEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 242 IPSPF-EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 242 ~~~~~-~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
...+. .+.++++.|++|+++ |.+.|++++++ ++.+.+..... ....+++.+..+++.++++.
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------------HIMKHLRTVHQ-NSVFHCPTQSQAAVAESFER 294 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------------HHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHH
T ss_pred hhcccccCcEEEEecchhccCCccceEEEEEeCH--------------HHHHHHHHHHh-hccCCCCcHHHHHHHHHHhh
Confidence 11110 135689999999874 33349998877 44443332211 12345567777777777764
No 55
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.87 E-value=1.1e-21 Score=186.25 Aligned_cols=251 Identities=12% Similarity=0.124 Sum_probs=171.6
Q ss_pred cChHHHHHHHHHHHHhhcCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC-
Q 018231 30 VDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR- 106 (359)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g- 106 (359)
-+..+|+...+.. ...+.|+|..+++ ++++.+.+++.+.+.+.. .+|+ ....++++.+++++++++|
T Consensus 17 ~g~~~~d~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~--------~~~~~~~~~l~~~l~~~~g~ 86 (391)
T 4dq6_A 17 NFSSKWSEMEKKY-GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGYT--------TRPDSYNESIVNWLYRRHNW 86 (391)
T ss_dssp TTBHHHHCHHHHH-SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCB--------CCCHHHHHHHHHHHHHHHCC
T ss_pred CCceeeeeccccc-CCCCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCCC--------CCCHHHHHHHHHHHHHHhCC
Confidence 3455666544321 1246688887776 467999999999876521 1221 1235677778899999999
Q ss_pred -CCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecc-cCCCCCCCC
Q 018231 107 -LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LNESTGYID 183 (359)
Q Consensus 107 -~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~d 183 (359)
++++ +|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..+++. ....++.+|
T Consensus 87 ~~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~d 154 (391)
T 4dq6_A 87 KIKSE----WLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNRELIISPLQKLENGNYIMD 154 (391)
T ss_dssp CCCGG----GEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTCEEEECCCEECTTSCEECC
T ss_pred CCcHH----HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCCeEEeeeeeecCCCceEee
Confidence 5554 499999999 8888999999999999999976665432 344556666556543 222446789
Q ss_pred HHHHHHHhhhhCCcEEEEc-CCC-CCCh---hhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCC-------CceE
Q 018231 184 YDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-------YADV 251 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~-------~~D~ 251 (359)
+++|++.+++ +++|+++ ++| +|.+ .++++|.++|++||+++|+|++|+...... ....++. +..+
T Consensus 155 ~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~~i 231 (391)
T 4dq6_A 155 YEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKK-HKHIPMASISKEFEKNTI 231 (391)
T ss_dssp HHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT-CCCCCGGGSCHHHHHTEE
T ss_pred HHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCC-CCccCHHHcCccccCcEE
Confidence 9999999976 8888887 777 8866 678899999999999999999997643321 1111111 1338
Q ss_pred EEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 252 VTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 252 v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.|++|+++ |.+.|+++++++ ++.+.+.........++++.+..+++.++++.
T Consensus 232 ~~~s~sK~~g~~G~r~G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (391)
T 4dq6_A 232 TCMAPTKTFNIAGLQSSYVVLPDE-------------KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN 287 (391)
T ss_dssp EEECSHHHHTCGGGCCEEEECCSH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEEechhhccCcccceEEEEeCCH-------------HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc
Confidence 8999999873 333499988763 33333332211223457888888888888875
No 56
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.87 E-value=7.4e-22 Score=186.09 Aligned_cols=226 Identities=11% Similarity=0.006 Sum_probs=160.3
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
.+.|+|..++++ +++.+++++.+.+.... +|+.. .. .+ +++++++++|++++ +|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~~----lr~~la~~~~~~~~----~v~~~~g~~ 92 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAH--LYPDD------SM-IE----LKSTLAQKYKVQNE----NIIIGAGSD 92 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTT--SCCCT------TC-HH----HHHHHHHHHTCCGG----GEEEESSHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhc--cCCCC------Ch-HH----HHHHHHHHhCCCcc----eEEECCCHH
Confidence 357999988775 68999999999876422 33322 22 33 55888889998765 499999999
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
++..++.+++++||+|+++.+.|.++. ..+...|.+++.++ .+.+++ +|++++++.+++ ++++|+++
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~v~--~~~~~~-~d~~~l~~~l~~-~~~~v~~~ 160 (365)
T 3get_A 93 QVIEFAIHSKLNSKNAFLQAGVTFAMYE--------IYAKQCGAKCYKTQ--SITHNL-DEFKKLYETHKD-EIKLIFLC 160 (365)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHH--------HHHHHHTCEEEECS--SSSCCH-HHHHHHHHHTTT-TEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeCCChHHHH--------HHHHHcCCEEEEEe--cCCCCC-CCHHHHHHHhCC-CCCEEEEc
Confidence 888888999999999999996665442 23445566665554 423567 999999999986 89999987
Q ss_pred -CCC-CCChhhHHHHHHHHH--HcCCEEEEecccccccc--c----cCCCCC-CCCCceEEEeCCCCcCC--CCCceEEE
Q 018231 203 -ASA-YARLYDYERIRKVCN--KQKAIMLADMAHISGLV--A----AGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIF 269 (359)
Q Consensus 203 -~~n-~g~~~~l~~i~~la~--~~~~~vivD~a~~~g~~--~----~~~~~~-~~~~~D~v~~s~~K~l~--gp~gG~l~ 269 (359)
++| +|.+.|++++.++++ ++|+++|+|++|+.... . .+.... ...+.+++++|++|+++ |.+.|+++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 888 898888888888887 67999999999974442 1 111000 00126799999999874 33349999
Q ss_pred EeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 270 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 270 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
+++ ++.+.+.....+ .+++.+..+++.++++
T Consensus 241 ~~~--------------~~~~~~~~~~~~---~~~~~~~~~~~~~~l~ 271 (365)
T 3get_A 241 ANA--------------NIISAFYKLRAP---FNVSNLALKAAVAAMD 271 (365)
T ss_dssp ECH--------------HHHHHHHHHSCT---TCSCHHHHHHHHHHHT
T ss_pred cCH--------------HHHHHHHHhcCC---CCcCHHHHHHHHHHhC
Confidence 866 555554433221 3577787778777776
No 57
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.87 E-value=2.6e-21 Score=185.40 Aligned_cols=254 Identities=12% Similarity=0.116 Sum_probs=169.1
Q ss_pred cccChHHHHHHHHHHHHhh-----------------cCceeeCCC---CCCcHHHHHHHHhhhhccCCCCCCCCc-ccCC
Q 018231 28 EVVDPEIADIIEHEKARQW-----------------KGLELIPSE---NFTSVSVMQAVGSVMTNKYSEGYPGAR-YYGG 86 (359)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~-----------------~~i~l~~~~---~~~~~~v~~al~~~~~~~~~~g~~~~~-~~~~ 86 (359)
+.++++++..+.+...... ..+++..+. ...+|.+++++.+.+.+ |..++.... .++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~-~~~~~~~~~~~~g~ 102 (409)
T 3kki_A 24 PQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLLE-EQQSLFMSASFLQN 102 (409)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHS-CCCCCCSBGGGGCS
T ss_pred ccchHHHHHHHHHHHHHHhhhccCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHHH-cCCCCCccccccCC
Confidence 4578888888866543321 124444433 12579999999998875 422322222 2222
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeee
Q 018231 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (359)
Q Consensus 87 ~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (359)
.+...+ +++++++++|.+. .+++++|+.++..++.++++|||.|++..+.|+++.. .+...|.
T Consensus 103 ~~~~~~----l~~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~ 165 (409)
T 3kki_A 103 DYDKPM----IEKRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWE--------GARYANA 165 (409)
T ss_dssp TTTSCH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHH--------HHHHTTC
T ss_pred cHHHHH----HHHHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHH--------HHHHcCC
Confidence 232333 5588888999864 4888888778888999999999999999977765533 3334455
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCC---
Q 018231 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV--- 241 (359)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~--- 241 (359)
++..+ +. .|+++|++.+++.++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.|.+...-
T Consensus 166 ~~~~~--~~------~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~ 237 (409)
T 3kki_A 166 QAHPF--MH------NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGL 237 (409)
T ss_dssp EEEEE--CT------TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH
T ss_pred eEEEe--cC------CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcc
Confidence 44333 22 489999999987578999998 666 899999999999999999999999999876542110
Q ss_pred -CCCCC-CCceEEEeCCCCcCCCCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCC-CCCCcHHHHHHHHHHHHH
Q 018231 242 -IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGL-QGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 242 -~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~gt~~~~~i~al~~Al~~ 318 (359)
...+. ..+|+++.|++|+++++ ||++++++++. +.+.....+.. .++++...++++.++++.
T Consensus 238 ~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~aa~~aal~~ 302 (409)
T 3kki_A 238 LAELGLTREVHFMTASLAKTFAYR-AGAIWCNNEVN--------------RCVPFISYPAIFSSTLLPYEAAGLETTLEI 302 (409)
T ss_dssp HHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSSGG--------------GTHHHHCHHHHHSBCCCHHHHHHHHHHHHH
T ss_pred hhhcCCCCCCCEEEeecchhhCCC-ceEEEECHHHH--------------HHHHHhCcCccccCCCcHHHHHHHHHHHHH
Confidence 00111 13789999999999765 79998887532 21111100111 134567778888888887
Q ss_pred Hhcc
Q 018231 319 VCTL 322 (359)
Q Consensus 319 ~~~~ 322 (359)
+...
T Consensus 303 ~~~~ 306 (409)
T 3kki_A 303 IESA 306 (409)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7643
No 58
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.87 E-value=1.8e-21 Score=185.42 Aligned_cols=254 Identities=11% Similarity=0.032 Sum_probs=171.2
Q ss_pred cccccChHHHHHHHHHHHH-----hhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHH
Q 018231 26 PLEVVDPEIADIIEHEKAR-----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (359)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (359)
+++.+.++.+..+.+..++ .++.|+|..+++. +++.+++++.+.+.... +|+ ...+..++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~------~~~g~~~lr~~la 76 (396)
T 3jtx_A 5 LLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHELE--KYP------LTAGLPELRQACA 76 (396)
T ss_dssp HHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGG--SCC------CTTCCHHHHHHHH
T ss_pred hhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhcc--CCC------CCCCcHHHHHHHH
Confidence 3445566656555543322 2357899877764 57999999998775322 232 2234567777888
Q ss_pred HHHHHHcCCC---CCCCceeEEECCChH-HHHHHHHhhcCCC-----CeeeecCCCCCcccCccccccccceeeeeeeeE
Q 018231 99 KRALEAFRLD---PEKWGVNVQSLSGSP-SNFQVYTALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 169 (359)
Q Consensus 99 ~~~a~~~g~~---~~~~~~~v~~tsG~~-a~~~~~~al~~~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 169 (359)
+++.+.+|.+ ++. +|++|+|++ ++..++.+++++| |+|+++.+.|.++. ..+...|.++.
T Consensus 77 ~~l~~~~g~~~~~~~~---~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~--------~~~~~~g~~~~ 145 (396)
T 3jtx_A 77 NWLKRRYDGLTVDADN---EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE--------GATLLGGGEIH 145 (396)
T ss_dssp HHHHHHTTTCCCCTTT---SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHH--------HHHHHTTCEEE
T ss_pred HHHHHhcCCCCCCCCC---eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH--------HHHHHcCCEEE
Confidence 9998888854 541 399999999 8888899999997 79999986555432 23445576666
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCCCC
Q 018231 170 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (359)
Q Consensus 170 ~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~ 244 (359)
.+++ +.+++.+|+++|++.+++ ++++|+++ ++| +|...+ +++|.++|++||+++|+|++|+........ ..
T Consensus 146 ~v~~--~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~ 221 (396)
T 3jtx_A 146 FANC--PAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK-PL 221 (396)
T ss_dssp EEEC--CTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCC-CC
T ss_pred Eeec--CCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC-Cc
Confidence 6654 545678899999999988 89999987 877 886655 556899999999999999998753332100 10
Q ss_pred C----------CCCceEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHH
Q 018231 245 P----------FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGL 312 (359)
Q Consensus 245 ~----------~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al 312 (359)
+ ..+.++++.|++|.++ |.+.|+++.++ ++.+.+..... ...++++.+..+++
T Consensus 222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~a~ 286 (396)
T 3jtx_A 222 GCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDA--------------ELLKNFLLYRT-YHGSAMSIPVQRAS 286 (396)
T ss_dssp CHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECH--------------HHHHHHHHHHH-HHTCCCCHHHHHHH
T ss_pred hHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCH--------------HHHHHHHHHHh-hcccCCCHHHHHHH
Confidence 0 0236899999999763 33349888766 44444332111 11246677777777
Q ss_pred HHHHH
Q 018231 313 AVALK 317 (359)
Q Consensus 313 ~~Al~ 317 (359)
.++++
T Consensus 287 ~~~l~ 291 (396)
T 3jtx_A 287 IAAWD 291 (396)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 77775
No 59
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.87 E-value=3e-21 Score=186.32 Aligned_cols=233 Identities=14% Similarity=0.126 Sum_probs=160.7
Q ss_pred CceeeCCCC---CCcHHHHHHHHhhhhccCCCCCCCCcccC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYG-GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 48 ~i~l~~~~~---~~~~~v~~al~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
.|+|..+.. ..++.+++++.+.+.. +..+++..++.. ......+ +++++++++|++. .+++++|+.
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~----l~~~la~~~g~~~-----~i~~~sGs~ 135 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHME----VEQALRDFYGTTG-----AIVFSTGYM 135 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHH----HHHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHH----HHHHHHHHhCCCc-----eEEecCcHH
Confidence 467777753 3678999999988765 222333222212 2233333 5588888998752 588888888
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh---CCcEEE
Q 018231 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIV 200 (359)
Q Consensus 124 a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~~k~v~ 200 (359)
++..++.+++++||.|++..+.|+++.. .+...|.++..++ . .|+++|++.+++. ++++|+
T Consensus 136 a~~~al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~~~~~~~--~------~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 136 ANLGIISTLAGKGEYVILDADSHASIYD--------GCQQGNAEIVRFR--H------NSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp HHHHHHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCSEEEEEC--T------TCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCeeEEeC--C------CCHHHHHHHHHhccCCCCeEEE
Confidence 8887888999999999999977776543 3344565554342 2 4899999999763 678888
Q ss_pred Ec-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCC----CCC-CCceEEEeCCCCcCCCCCceEEEEeCC
Q 018231 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP----SPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 273 (359)
Q Consensus 201 l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~----~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (359)
++ ++| +|.+.|+++|.++|++||+++|+|++|+.+........ .++ .++|++++|++|+++ ++||+++++++
T Consensus 200 ~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~gG~v~~~~~ 278 (427)
T 2w8t_A 200 LEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVGGFVVSNHP 278 (427)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SCCEEEEECCT
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cCCCEEEeCHH
Confidence 87 555 89889999999999999999999999988766410000 111 147999999999985 77899999874
Q ss_pred cchhccCCcchhhhHHHhhccccCCC-CCCCCcHHHHHHHHHHHHHHhc
Q 018231 274 VKEINKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~-~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+ .+.+.....+. ..++++...++++.++++.+..
T Consensus 279 l--------------~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~ 313 (427)
T 2w8t_A 279 K--------------FEAVRLACRPYIFTASLPPSVVATATTSIRKLMT 313 (427)
T ss_dssp T--------------GGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTS
T ss_pred H--------------HHHHHHhcccccccCCCCHHHHHHHHHHHHHHhc
Confidence 2 22222210011 1256778888888889988754
No 60
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.87 E-value=1.1e-21 Score=185.68 Aligned_cols=253 Identities=12% Similarity=0.102 Sum_probs=167.6
Q ss_pred cCh-HHHHHHHHHHHHh----hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHH
Q 018231 30 VDP-EIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (359)
Q Consensus 30 ~~~-~~~~~~~~~~~~~----~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a 102 (359)
+.+ +.+..+.+..... .+.|+|..+++. +++.+++++.+.+.+... ..|+......++++++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~ 77 (376)
T 2dou_A 4 VPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYE 77 (376)
T ss_dssp CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHH
Confidence 344 5555554433322 356889887764 578999999888754211 123333456777777777777
Q ss_pred HHcCCC--CCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCC
Q 018231 103 EAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (359)
Q Consensus 103 ~~~g~~--~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (359)
+.+|++ +++ +|++|+|++ ++..++.+++++||+|+++.+.|.++. ..+...|.++..++ .+ ++
T Consensus 78 ~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~~~--~~-~~ 143 (376)
T 2dou_A 78 GRYGVGLDPRR---EALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYF--------GAARVASLRTFLIP--LR-ED 143 (376)
T ss_dssp HHHSCCCCTTT---SEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--------HHHHHTTCEEEEEC--BC-TT
T ss_pred HHhCCCCCCCc---cEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHH--------HHHHHcCCEEEEee--CC-CC
Confidence 777985 331 399999999 888789999999999999996665442 23344566665565 43 56
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc---CCCCC-CCCCce
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPS-PFEYAD 250 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~---~~~~~-~~~~~D 250 (359)
+.+|++++++.+++ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+.+.... ..... ...+.+
T Consensus 144 ~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 222 (376)
T 2dou_A 144 GLADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERV 222 (376)
T ss_dssp SSBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTE
T ss_pred CCCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcE
Confidence 67899999998876 79999997 777 886654 7788999999999999999997654321 11110 001367
Q ss_pred EEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 251 VVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 251 ~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+++.|++|+++ |.+.|++++++ ++.+.+...... ...+++.+..+++.++|+.
T Consensus 223 i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~ 277 (376)
T 2dou_A 223 VELFSLSKSYNLAGFRLGFALGSE--------------EALARLERVKGV-IDFNQYAGVLRMGVEALKT 277 (376)
T ss_dssp EEEEEHHHHHTCGGGCCEEEEECH--------------HHHHHHHHHHHH-HCCCSCHHHHHHHHHHHTS
T ss_pred EEEecchhhcCChhheeEEEecCH--------------HHHHHHHHHHHh-cccCCCHHHHHHHHHHHhC
Confidence 89999999884 33449988876 444433322111 1124466666666666643
No 61
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.87 E-value=5.8e-22 Score=189.80 Aligned_cols=230 Identities=15% Similarity=0.053 Sum_probs=152.5
Q ss_pred ccccccccChHHHHHHH---HHHHHhhcCceeeCCCC-----CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHH
Q 018231 23 LNAPLEVVDPEIADIIE---HEKARQWKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~---~~~~~~~~~i~l~~~~~-----~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~ 94 (359)
.+++++.+.+.....+. +..+...+.|+|..+.+ ++++.+.+++.+.+.... .+ |+...+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~ 84 (406)
T 1xi9_A 12 ASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NY------YGDSEGLPELR 84 (406)
T ss_dssp CCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHH
T ss_pred HHHHHhcCChhHHHHHHHHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHH
Confidence 44455555554333333 22222235788887766 467899999988876522 12 23234456777
Q ss_pred HHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEec
Q 018231 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (359)
Q Consensus 95 ~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (359)
+.+.+++.+.+|.+.+. .+|++|+|++ ++..++.+++++||+|+++++.|.++.. .+...|.+++.+++
T Consensus 85 ~~la~~l~~~~g~~~~~--~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~ 154 (406)
T 1xi9_A 85 KAIVEREKRKNGVDITP--DDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTG--------LVKFYGGKPVEYRT 154 (406)
T ss_dssp HHHHHHHHHHHCCCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCH--HHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeec
Confidence 77778887777653211 2599999988 8888889999999999999976655422 33445666655654
Q ss_pred ccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccccC---CCCCC
Q 018231 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG---VIPSP 245 (359)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~~---~~~~~ 245 (359)
+.+ +++.+|+++|++.+++ ++++|+++ ++| +|... ++++|.++|+++|+++|+|++|+.+..... +...+
T Consensus 155 ~~~-~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~ 232 (406)
T 1xi9_A 155 IEE-EDWQPDIDDIRKKITD-RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT 232 (406)
T ss_dssp EGG-GTSEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC
T ss_pred CCC-cCCcCCHHHHHHhhCc-CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC
Confidence 321 3567899999999987 88988887 777 88654 489999999999999999999976543110 00010
Q ss_pred CCCc-eEEEeCCCCcCC--CCCceEEE--EeC
Q 018231 246 FEYA-DVVTTTTHKSLR--GPRGAMIF--FRK 272 (359)
Q Consensus 246 ~~~~-D~v~~s~~K~l~--gp~gG~l~--~~~ 272 (359)
.+. |++++|++|+++ |.+.|+++ .++
T Consensus 233 -~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 263 (406)
T 1xi9_A 233 -KDVPVIVMNGLSKVYFATGWRLGYMYFVDPE 263 (406)
T ss_dssp -SSSCEEEEEESTTTTCCGGGCCEEEEEECTT
T ss_pred -CCceEEEEeccccccCCCccEEEEEEEecCc
Confidence 236 899999999985 32348888 555
No 62
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.87 E-value=4.7e-22 Score=187.38 Aligned_cols=247 Identities=10% Similarity=0.056 Sum_probs=159.7
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCC--CCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~--~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~- 123 (359)
+.+++.+++.++|+.|++++.+.+.+..+.+.. ...++ + ....++.+.+++++++++|++++. ..+++|+|++
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~la~~~g~~~~~--~~i~~t~g~t~ 79 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR-G-AVYEAVHNEAQARLLALLGNPTGY--KVLFIQGGAST 79 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT-S-HHHHHHHHHHHHHHHHHTTCCSSE--EEEEESSHHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCC-c-HHHHHHHHHHHHHHHHHhCCCCCc--EEEEECCCchH
Confidence 356888999999999999999987652211111 00111 1 223445566889999999997531 1257888888
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 124 a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
++..++.++++|||+|+++++.+.++. . ...+...| +++.++++.+. .+..+|.++++ +++ +||+|+++
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~--~----~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~~ 149 (362)
T 2c0r_A 80 QFAMIPMNFLKEGQTANYVMTGSWASK--A----LKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHLT 149 (362)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHH--H----HHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEecCcHhHH--H----HHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEEe
Confidence 888899999999999988763322210 0 01233446 67667654211 12245776654 666 89998887
Q ss_pred -CCC-CCCh-hhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhc
Q 018231 203 -ASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (359)
Q Consensus 203 -~~n-~g~~-~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (359)
++| ||.. .|+++| +|+++++|++|+.|..+.++. ..|++++|+||++ ||.| |++++++++...+
T Consensus 150 ~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-----~~d~~~~s~~K~~-g~~G~G~l~~~~~~~~~l 217 (362)
T 2c0r_A 150 SNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-----QFGLVYAGAQKNL-GPSGVTVVIVREDLVAES 217 (362)
T ss_dssp SEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-----GCSEEEEETTTTT-CCSSCEEEEEEGGGSSSC
T ss_pred CCcCccceeccccccc------CCCEEEEEChhhccCCccchh-----HCcEEEEeccccc-cCcCcEEEEEcHHHHhhc
Confidence 666 8864 677776 899999999999887665432 2589999999998 5888 9999988642211
Q ss_pred cCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 279 KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 279 ~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
.......+++..... .....+|++.+.++++.+|++.+.+.
T Consensus 218 ~~~~~~~~~~~~~~~---~~~~~~t~~~~~~~a~~~al~~~~~~ 258 (362)
T 2c0r_A 218 PKHLPTMLRYDTYVK---NNSLYNTPPSFGIYMVNEVLKWIEER 258 (362)
T ss_dssp CTTSCGGGCHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHHT
T ss_pred cccCchHHhHHHHhh---ccCcCCCchHHHHHHHHHHHHHHHHh
Confidence 111011111111000 11224789999999999999887653
No 63
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.86 E-value=1.4e-21 Score=186.58 Aligned_cols=235 Identities=17% Similarity=0.196 Sum_probs=160.7
Q ss_pred cCceeeCCCCC---CcHHHHHHHHhhhhccCCCCCCCCccc-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 47 KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~~---~~~~v~~al~~~~~~~~~~g~~~~~~~-~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
..|++..+... .++.+.+++.+.+.. +..++...++. +......+ +++.+++++|++ + .|++++|+
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~-~----~i~~~sGs 115 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMDS-HGFGMASVRFICGTQDSHKE----LEQKLAAFLGME-D----AILYSSCF 115 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCHHHHCCBHHHHH----HHHHHHHHHTCS-E----EEEESCHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCCCcccCCcHHHHH----HHHHHHHHhCCC-c----EEEeCChH
Confidence 35777766332 389999999988764 32222222211 11222333 568888899987 2 48888987
Q ss_pred HHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh-----CCc
Q 018231 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPK 197 (359)
Q Consensus 123 ~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~~k 197 (359)
.++..++.+++++||.|++..+.|+++.. .+...|.++..++ . .|+++|++.+++. +++
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~~~~~ 179 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKAKRYRYA--N------NDMQELEARLKEAREAGARHV 179 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCSEEEEEC--T------TCHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCCceEEEC--C------CCHHHHHHHHHHhhccCCCce
Confidence 77777888899999999999977765432 2334565554442 2 3889999988752 688
Q ss_pred EEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccc-cCCC-C--CCC-CCceEEEeCCCCcCCCCCceEEEE
Q 018231 198 LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVI-P--SPF-EYADVVTTTTHKSLRGPRGAMIFF 270 (359)
Q Consensus 198 ~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~-~~~~-~--~~~-~~~D~v~~s~~K~l~gp~gG~l~~ 270 (359)
+|+++ ++| +|...++++|.++|+++|+++|+|++|+.|... .+.. . .++ .+.|++++|+||+++|+.||++++
T Consensus 180 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~ 259 (401)
T 1fc4_A 180 LIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAA 259 (401)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEE
T ss_pred EEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEc
Confidence 98887 666 898899999999999999999999999766652 1100 0 111 147999999999996667899999
Q ss_pred eCCcchhccCCcchhhhHHHhhccccCCC-CCCCCcHHHHHHHHHHHHHHhc
Q 018231 271 RKGVKEINKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~gt~~~~~i~al~~Al~~~~~ 321 (359)
++ ++.+.+.....+. ..++++....+++.++++.+..
T Consensus 260 ~~--------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 297 (401)
T 1fc4_A 260 RK--------------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA 297 (401)
T ss_dssp CH--------------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT
T ss_pred CH--------------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc
Confidence 76 4444433221111 1347788888888889988754
No 64
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.86 E-value=2.5e-21 Score=184.70 Aligned_cols=238 Identities=12% Similarity=0.137 Sum_probs=161.7
Q ss_pred cCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeEEECCCh
Q 018231 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g--~~~~~~~~~v~~tsG~ 122 (359)
+.++|..+++ ++++.+.+++.+.+.... .+| +.. ..++++++.+++.+.+| ++++ +|++|+|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~v~~t~g~ 98 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETV-LGY------TGP--TEEYKKTVKKWMKDRHQWDIQTD----WIINTAGV 98 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CSS------BCC--CHHHHHHHHHHHHHHHCCCCCGG----GEEEESSH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCC-CCC------CCC--cHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 5688887776 357899999998875421 122 221 46677777788877788 4443 49999999
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+ ++..++.+++++||+|++..+.|.++.. .+...|.++..++...+..++.+|+++|++.+++.++++|++
T Consensus 99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 99 VPAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 9 8888999999999999999976665432 333456555555432111134689999999998337899888
Q ss_pred c-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc----CCCCCCC--CCceEEEeCCCCcCC--CCCceEE
Q 018231 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF--EYADVVTTTTHKSLR--GPRGAMI 268 (359)
Q Consensus 202 ~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~~--~~~D~v~~s~~K~l~--gp~gG~l 268 (359)
+ ++| +|.+.+ +++|.++|++||+++|+|++|+...... .+..... .+.++++.|++|+++ |.+.|++
T Consensus 171 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (399)
T 1c7n_A 171 CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI 250 (399)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEE
Confidence 7 777 887766 8999999999999999999997643321 1111100 125689999999874 3334999
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+++++ ++.+.+........+++++.+..+++.++++.
T Consensus 251 ~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (399)
T 1c7n_A 251 IIKNP-------------DIRERFTKSRDATSGMPFTTLGYKACEICYKE 287 (399)
T ss_dssp ECCCH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EECCH-------------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 98753 34444333222222346777887877777764
No 65
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.86 E-value=5.3e-21 Score=179.35 Aligned_cols=225 Identities=11% Similarity=0.041 Sum_probs=161.3
Q ss_pred cCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-
Q 018231 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (359)
Q Consensus 47 ~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~- 123 (359)
+.|+|..++++ +++.+++++.+.+.+.. +|+ . ....+ +++++++++|++++ +|++|+|++
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~------~-~~~~~----l~~~la~~~~~~~~----~i~~~~g~~~ 79 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKAN--RYA------K-NEILM----LGNKLAAHHQVEAP----SILLTAGSSE 79 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGTT--SCC------H-HHHHH----HHHHHHHHTTSCGG----GEEEESHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhCc--CCC------C-CchHH----HHHHHHHHhCCChH----HEEEeCChHH
Confidence 56889888775 68999999998876522 222 1 22333 56889999998765 499999999
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh-hCCcEEEEc
Q 018231 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG 202 (359)
Q Consensus 124 a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-~~~k~v~l~ 202 (359)
++..++.+++++||+|+++.+.|.++.. .+...|.+++.++ .+ +++.+|+++|++.+++ .++++|+++
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~~~~~~~v~l~ 148 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGMKVTKVK--ML-DNWAFDIEGLKAAVAAYSGPSIVYLV 148 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--CC-TTSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCCEEEEec--CC-CCCCCCHHHHHHHhccCCCCCEEEEe
Confidence 8888889999999999999976665422 3445566665554 44 4588999999999983 289999987
Q ss_pred -CCC-CCChhhHHHHHHHHHH--cCCEEEEeccccccccccCCCCCCC-----C-CceEEEeCCCCcCC--CCCceEEEE
Q 018231 203 -ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF-----E-YADVVTTTTHKSLR--GPRGAMIFF 270 (359)
Q Consensus 203 -~~n-~g~~~~l~~i~~la~~--~~~~vivD~a~~~g~~~~~~~~~~~-----~-~~D~v~~s~~K~l~--gp~gG~l~~ 270 (359)
++| +|...+.+++.++++. +|+++|+|++|+....... ....+ . +.+++++|++|+++ |.+.|++++
T Consensus 149 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 227 (354)
T 3ly1_A 149 NPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPR-FRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA 227 (354)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTT-CCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred CCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccc-cCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence 777 8988888888888777 9999999999975433211 00000 1 35699999999884 333399988
Q ss_pred eCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 271 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
++ ++.+.+...... ++++.+..+++.++++
T Consensus 228 ~~--------------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~ 257 (354)
T 3ly1_A 228 HP--------------TVIALMGRYVAG---EKINFSGVDAALASMN 257 (354)
T ss_dssp CH--------------HHHHHHGGGTTC---SCCCHHHHHHHHHHTT
T ss_pred CH--------------HHHHHHHHhcCC---CCCCHHHHHHHHHHhc
Confidence 66 555555543322 5777888777777765
No 66
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.86 E-value=9.8e-22 Score=188.43 Aligned_cols=248 Identities=14% Similarity=0.160 Sum_probs=158.4
Q ss_pred CceeeCCC-CCCcHHHHHHHHhhhhccCCCCCCCCc-ccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-H
Q 018231 48 GLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (359)
Q Consensus 48 ~i~l~~~~-~~~~~~v~~al~~~~~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a 124 (359)
.+.|+.+. .+.|+.|.+++.+.+.+.+ +++... ++.. ......+.+++++++++|+++++ |++|+|++ +
T Consensus 29 ~~yld~~~~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~--~~~~~~~~l~~~la~~~g~~~~~----v~~~~g~t~a 100 (416)
T 1qz9_A 29 VIYLDGNSLGARPVAALARAQAVIAEEW--GNGLIRSWNSA--GWRDLSERLGNRLATLIGARDGE----VVVTDTTSIN 100 (416)
T ss_dssp CEECCTTTSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHT--SGGGHHHHHHHHHHTTTTCCTTS----EEECSCHHHH
T ss_pred eEeecCCCcCCCcHHHHHHHHHHHHHHH--hccCccccchh--hHHHHHHHHHHHHHHHcCCCccc----EEEeCChhHH
Confidence 45665433 3678899999999887533 322111 1110 01122234679999999997654 99999988 7
Q ss_pred HHHHHHhhc------CCCCeeeec-CCCCCcccCccccccccceeee--eeeeEEEecccCCCCCCCCHHHHHHHhhhhC
Q 018231 125 NFQVYTALL------KPHDRIMAL-DLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFR 195 (359)
Q Consensus 125 ~~~~~~al~------~~Gd~Vl~~-~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~ 195 (359)
+..++.+++ ++||+|++. ...|+++..+.... .... |.+++.+++ +++|++.+++ +
T Consensus 101 l~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~----~~~~~~g~~~~~v~~----------~~~l~~~i~~-~ 165 (416)
T 1qz9_A 101 LFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGL----ADMLQQGYTLRLVDS----------PEELPQAIDQ-D 165 (416)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHH----HHHHCSSCEEEEESS----------GGGHHHHCST-T
T ss_pred HHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHH----HHHhcCCceEEEeCc----------HHHHHHHhCC-C
Confidence 766777765 899975544 45666543322110 1112 544544432 6788888887 8
Q ss_pred CcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCC-CCCc-eEEEEe
Q 018231 196 PKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR-GPRG-AMIFFR 271 (359)
Q Consensus 196 ~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~-gp~g-G~l~~~ 271 (359)
+++|+++ ++| +|...|+++|.++|+++|+++|+|++|+.|..+.+.... ++|++++|+||+++ |+++ |+++++
T Consensus 166 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~g~~~~g~l~~~ 242 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA---GADYAIGCTYKYLNGGPGSQAFVWVS 242 (416)
T ss_dssp EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEEECSSSTTCCCTTCCCEEEEC
T ss_pred ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhc---CCCEEEecCcccCCCCCCCeEEEEEC
Confidence 9998887 666 899999999999999999999999999887665443222 37999999999984 6666 999998
Q ss_pred CCcchhcc---CCc---chhhhHHHhhccc--cCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 272 KGVKEINK---QGK---EVFYDYEEKINQA--VFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 272 ~~~~~~~~---~g~---~~~~~~~~~~~~~--~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+++...+. .|+ ...+++...+... ......|+++...++++.+|++.+.+
T Consensus 243 ~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (416)
T 1qz9_A 243 PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQ 300 (416)
T ss_dssp TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHh
Confidence 86422111 111 0000000000000 00112478999999999999988764
No 67
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.3e-21 Score=190.00 Aligned_cols=258 Identities=11% Similarity=0.094 Sum_probs=173.5
Q ss_pred cChHHHHHHHHHHH--------HhhcCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHH
Q 018231 30 VDPEIADIIEHEKA--------RQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (359)
Q Consensus 30 ~~~~~~~~~~~~~~--------~~~~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (359)
+.+..+..+.+... ...+.|+|..+.+ .+++.+.+++.+.+.+... ..|+...+..++++++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMV------NQYSPTRGRPSLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGG------GSCCCTTCCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCC------CCCCCCCCCHHHHHHHHH
Confidence 67778888876542 2346789987754 3578999999988764111 122333445677777778
Q ss_pred HHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC-
Q 018231 100 RALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE- 177 (359)
Q Consensus 100 ~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~- 177 (359)
++.+.+|.+.+. .+|++|+|++ ++..++.++++|||+|+++++.|.++.. .+...|.+++.+++..+.
T Consensus 107 ~l~~~~g~~~~~--~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~ 176 (447)
T 3b46_A 107 LYSPIYNTELKA--ENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGGKVVYVPINPPKE 176 (447)
T ss_dssp HHTTTTTSCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEEEECCGG
T ss_pred HHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEeCCCccc
Confidence 887777763221 2499999988 8888999999999999999966665432 344556666556542210
Q ss_pred --------CCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCCh---hhHHHHHHHHHHcCCEEEEeccccccccccCC-CC
Q 018231 178 --------STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IP 243 (359)
Q Consensus 178 --------~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~-~~ 243 (359)
.++.+|+++|++.+++ ++++|+++ ++| +|.+ .++++|+++|++||+++|+|++|+........ ..
T Consensus 177 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~ 255 (447)
T 3b46_A 177 LDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRI 255 (447)
T ss_dssp GGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG
T ss_pred cccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCH
Confidence 1467899999999986 89999887 777 8865 46899999999999999999999753322110 00
Q ss_pred CCC----CCceEEEeCCCCcCC--CCCceEEEE-eCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHH
Q 018231 244 SPF----EYADVVTTTTHKSLR--GPRGAMIFF-RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 316 (359)
Q Consensus 244 ~~~----~~~D~v~~s~~K~l~--gp~gG~l~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al 316 (359)
..+ .+.|+++.|++|+|+ |.+.|++++ ++ ++.+.+..... ....+++.+..+++.++|
T Consensus 256 ~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~--------------~l~~~l~~~~~-~~~~~~~~~~~~a~~~aL 320 (447)
T 3b46_A 256 ATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA--------------ELLSYAAKAHT-RICFASPSPLQEACANSI 320 (447)
T ss_dssp GGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH--------------HHHHHHHHHHH-HHTSSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH--------------HHHHHHHHHHh-hccCCCChHHHHHHHHHH
Confidence 111 147999999999885 333499998 65 44443322110 012345666667777888
Q ss_pred HHH
Q 018231 317 KQV 319 (359)
Q Consensus 317 ~~~ 319 (359)
+..
T Consensus 321 ~~~ 323 (447)
T 3b46_A 321 NDA 323 (447)
T ss_dssp HHH
T ss_pred hCC
Confidence 765
No 68
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.86 E-value=2.5e-21 Score=184.30 Aligned_cols=232 Identities=19% Similarity=0.195 Sum_probs=161.9
Q ss_pred CceeeCCCC---CCcHHHHHHHHhhhhccCCCCCCCCcc-cCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 48 ~i~l~~~~~---~~~~~v~~al~~~~~~~~~~g~~~~~~-~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
.|++..+.. ..++.+.+++.+.+.. +..+++..++ ++..+...+ +++++++++|.+. .|++++|+.
T Consensus 45 ~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~sGt~ 114 (399)
T 3tqx_A 45 VLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQTIHKE----LEKDISEFLGTDD-----TILYSSCFD 114 (399)
T ss_dssp EEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCBHHHHH----HHHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCchHHHH----HHHHHHHHHCCCc-----EEEECchHH
Confidence 477777643 2479999999988765 3223332222 222233343 5588899999763 588998877
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcE
Q 018231 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKL 198 (359)
Q Consensus 124 a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~~k~ 198 (359)
++..++.+++++||.|++..+.|+++.. .+...|.++..++ . .|++++++.+++. ++++
T Consensus 115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 115 ANGGLFETLLGPEDAIISDELNHASIID--------GIRLCKAQRYRYK--N------NAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHSCCSEEEEEC--T------TCTTHHHHHHHHHHTTTCSSEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCceeEeC--C------CCHHHHHHHHHhhhccCCCceE
Confidence 8887888999999999999977765432 3445565554443 2 3778888888753 6889
Q ss_pred EEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCC----CCCC-CCceEEEeCCCCcCCCCCceEEEEe
Q 018231 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (359)
Q Consensus 199 v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~----~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~ 271 (359)
|+++ ++| +|...|+++|.++|++||+++|+|++|+.|....... ..+. .+.|++++|+||+++|++||+++++
T Consensus 179 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~ 258 (399)
T 3tqx_A 179 IATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGH 258 (399)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEEC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcC
Confidence 8887 666 8988999999999999999999999997665432210 0110 1369999999999987889999988
Q ss_pred CCcchhccCCcchhhhHHHhhccccCCC-CCCCCcHHHHHHHHHHHHHH
Q 018231 272 KGVKEINKQGKEVFYDYEEKINQAVFPG-LQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 272 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~gt~~~~~i~al~~Al~~~ 319 (359)
+ ++.+.+.....+. ..++++...++++.++++.+
T Consensus 259 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (399)
T 3tqx_A 259 K--------------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL 293 (399)
T ss_dssp H--------------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH
T ss_pred H--------------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH
Confidence 7 4444333221111 13577888888888888877
No 69
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.86 E-value=3.2e-21 Score=184.98 Aligned_cols=261 Identities=15% Similarity=0.159 Sum_probs=162.7
Q ss_pred ccccccccChHHHHHHHHHHHH----hhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (359)
++++++.+.++.+..+.+...+ ..+.|+|..+.+. +++.+++++.+.+......+ |+...+..++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ 83 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHG------YSTSRGIPRLRRA 83 (412)
T ss_dssp -----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------------CTTCCHHHHHH
T ss_pred hhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCcHHHHHH
Confidence 5566666766666655443321 1246889877764 57899999988775421111 2222445677767
Q ss_pred HHHHHHHHcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEec
Q 018231 97 CQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (359)
Q Consensus 97 ~~~~~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (359)
+.+++.+.+|+ ++++ +|++|+|++ ++..++.+++++||+|+++++.|+++.. .+...|.++..++
T Consensus 84 ia~~~~~~~g~~~~~~~---~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~- 151 (412)
T 2x5d_A 84 ISHWYRDRYDVQIDPES---EAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGAQVRSVP- 151 (412)
T ss_dssp HHHHHHHHHCCCCCTTT---SEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTCEEEEEE-
T ss_pred HHHHHHHHhCCCCCCCc---CEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEee-
Confidence 77777777786 4422 399999999 8888899999999999999966665432 3334566565554
Q ss_pred ccCCC-CCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc----CCCC
Q 018231 174 RLNES-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GVIP 243 (359)
Q Consensus 174 ~~~~~-~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~ 243 (359)
.+++ ++.+|+++|++.+++ ++++|+++ ++| +|... ++++|.++|++||+++|+|++|+.+.... .+..
T Consensus 152 -~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 229 (412)
T 2x5d_A 152 -LVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229 (412)
T ss_dssp -CSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred -cCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhh
Confidence 4433 345789999999886 89999987 877 88655 47889999999999999999998755321 1111
Q ss_pred CC-CCCceEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 244 SP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 244 ~~-~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
.. ..+.|++++|++|+++ |.+.|++++++ ++.+.+..... ....+++.+..+++.++|+.
T Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~ 292 (412)
T 2x5d_A 230 VPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP--------------ELVSALARIKS-YHDYGTFTPLQVAAIAALEG 292 (412)
T ss_dssp STTGGGTEEEEEECC-CCSCTTSCCEEEEECH--------------HHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHS
T ss_pred ccCccCcEEEEecCccccCCcccceEEEEcCH--------------HHHHHHHHHHh-hhccCCCHHHHHHHHHHHhC
Confidence 11 0247899999999984 33349999876 44443332111 11245666777777777754
No 70
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.86 E-value=1.3e-20 Score=177.62 Aligned_cols=229 Identities=14% Similarity=0.050 Sum_probs=158.9
Q ss_pred cCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeEEECCChH
Q 018231 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP 123 (359)
Q Consensus 47 ~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~-~~~~~~~~v~~tsG~~ 123 (359)
+.|+|..++++ +++.+++++.+.+.+....+|+. ....+ +++++++++|+ +++ +|++|+|++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~----l~~~la~~~g~~~~~----~i~~~~g~t 95 (367)
T 3euc_A 31 GLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEA----LRAKLKEVMQVPAGM----EVLLGNGSD 95 (367)
T ss_dssp TCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHH----HHHHHHHHHTCCTTC----EEEEEEHHH
T ss_pred CeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHH----HHHHHHHHhCCCCcc----eEEEcCCHH
Confidence 56999888875 68999999998876411112221 22333 55888889998 443 599999999
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
++..++.+++++||+|++..+.|.++.. .+...|.++..++ .+ +++.+|+++|++.+++.++++|+++
T Consensus 96 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 96 EIISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGLEFVGVP--LR-ADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp HHHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEec--CC-CCCCCCHHHHHHHhhccCCCEEEEc
Confidence 8888889999999999999977765432 3344566665554 55 4678999999999987689999987
Q ss_pred -CCC-CCCh---hhHHHHHHHHHHc--CCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcC-CCCCceEEEEeCCc
Q 018231 203 -ASA-YARL---YDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL-RGPRGAMIFFRKGV 274 (359)
Q Consensus 203 -~~n-~g~~---~~l~~i~~la~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l-~gp~gG~l~~~~~~ 274 (359)
++| +|.+ .++++|.++|++| |+++|+|++|+..............+.++++.|++|+. .|.+.|++++++
T Consensus 165 ~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~-- 242 (367)
T 3euc_A 165 YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP-- 242 (367)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECH--
T ss_pred CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccccCceeeeeCH--
Confidence 777 8866 4677888889999 99999999986422110000001113678999999972 122338888866
Q ss_pred chhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 275 KEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 275 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.+.+..... ..+++....+++.++++.
T Consensus 243 ------------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 243 ------------QWLEQLDKVRP---PYNVNVLTEATALFALEH 271 (367)
T ss_dssp ------------HHHHHHGGGCC---SSCCCHHHHHHHHHHHTT
T ss_pred ------------HHHHHHHHhCC---CCCCCHHHHHHHHHHhcC
Confidence 55555544322 235677777777777755
No 71
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.86 E-value=1.1e-20 Score=186.63 Aligned_cols=174 Identities=18% Similarity=0.148 Sum_probs=134.2
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--------------CCCeeeecCCCCCcccC
Q 018231 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK--------------PHDRIMALDLPHGGHLS 151 (359)
Q Consensus 87 ~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~--------------~Gd~Vl~~~~~~~~~~~ 151 (359)
.....++|+.+.+|+++++|.+.+. ..+++|+|++ ++..++.++.. +++.|+++...|.++..
T Consensus 130 ~p~~~~le~~~~~~l~~~~g~~~~~--~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~ 207 (511)
T 3vp6_A 130 APVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKK 207 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHH
T ss_pred CchHHHHHHHHHHHHHHHhCCCCCC--CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHH
Confidence 3667889999999999999997421 2588888888 87767666543 57889999877776543
Q ss_pred ccccccccceeeeee---eeEEEecccCCCCCCCCHHHHHHHhhhhC-----CcEEEEc-CCC-CCChhhHHHHHHHHHH
Q 018231 152 HGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLYDYERIRKVCNK 221 (359)
Q Consensus 152 ~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~~~-----~k~v~l~-~~n-~g~~~~l~~i~~la~~ 221 (359)
.+...|. +++.++ .+ +++.+|+++|++++++.+ |++|+++ ++| +|.+.|+++|+++|++
T Consensus 208 --------~~~~~g~g~~~~~~v~--~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~ 276 (511)
T 3vp6_A 208 --------AGAALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEK 276 (511)
T ss_dssp --------HHHHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHH
T ss_pred --------HHHHcCCCCCcEEEee--cC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHH
Confidence 3334454 555564 55 568999999999998632 7888887 676 8999999999999999
Q ss_pred cCCEEEEeccccccccccCCCCC---CCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 222 QKAIMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 222 ~~~~vivD~a~~~g~~~~~~~~~---~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
||+++++|++|+.+.+..+.... +..++|++++++||||++|.| |+++++++
T Consensus 277 ~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~ 332 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 332 (511)
T ss_dssp HTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred cCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH
Confidence 99999999999988775432111 223579999999999999988 99999885
No 72
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.86 E-value=2.2e-21 Score=183.71 Aligned_cols=237 Identities=13% Similarity=0.152 Sum_probs=160.8
Q ss_pred cCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeEEECCCh
Q 018231 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g--~~~~~~~~~v~~tsG~ 122 (359)
+.|+|..+++. +++.+.+++.+.+.+.. .+|+.. ..++++.+++++++.+| ++++ +|++|+|+
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~----~v~~~~g~ 91 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHPI-FGYTLP--------PENIGDIICNWTKKQYNWDIQKE----WIVFSAGI 91 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCC-CCCCCC--------CTTHHHHHHHHHHHHHCCCCCGG----GEEEESCH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcCC-CCCCCC--------CHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 56888877663 58999999999887521 122211 23455667799999999 4554 49999999
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+ ++..++.+++++||+|+++.+.|.++. ..+...|.++..+++..+..++.+|+++|++.+++ ++++|++
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i 162 (383)
T 3kax_A 92 VPALSTSIQAFTKENESVLVQPPIYPPFF--------EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLL 162 (383)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCHHHH--------HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT-TCCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCcHHHH--------HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc-CCeEEEE
Confidence 9 888789999999999999996665543 23445566665555432212356899999999966 8999988
Q ss_pred c-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccC----CCCCCC--CCceEEEeCCCCcCC--CCCceEE
Q 018231 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPF--EYADVVTTTTHKSLR--GPRGAMI 268 (359)
Q Consensus 202 ~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~----~~~~~~--~~~D~v~~s~~K~l~--gp~gG~l 268 (359)
+ ++| +|...+ +++|.++|++||+++|+|++|+....... +..... .+.++++.|++|+++ |.+.|++
T Consensus 163 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 242 (383)
T 3kax_A 163 CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASII 242 (383)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEE
Confidence 7 777 886654 66777779999999999999975443211 111100 024599999999874 2333888
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+++++ ++.+.+.........++++.+..+++.++++.
T Consensus 243 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 243 IIPNE-------------KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp ECCCH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT
T ss_pred EeCCH-------------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 88543 44444433222223457788888888777754
No 73
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.86 E-value=1.1e-20 Score=183.71 Aligned_cols=197 Identities=10% Similarity=0.016 Sum_probs=144.4
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCC--CceeEEECCChH-HHHHHHHhhc
Q 018231 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK--WGVNVQSLSGSP-SNFQVYTALL 133 (359)
Q Consensus 57 ~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~--~~~~v~~tsG~~-a~~~~~~al~ 133 (359)
+.++.+.+++.+++.... .. +.......++++.+++++++++|++.++ + ..+++|+|++ ++..++.++.
T Consensus 53 ~~~~~v~e~~~~a~~~~~--~~-----~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~-~~~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNW--ID-----KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQ-AVGTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp CCCHHHHHHHHHTTTCBT--TC-----TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSC-CEEEEESSHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCC--CC-----hhhChhHHHHHHHHHHHHHHHhCCCcccccC-CceEEeCCHHHHHHHHHHHHH
Confidence 456889998888775422 11 1222456788888999999999997531 0 1388999999 8887777765
Q ss_pred C--------CC-----CeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 018231 134 K--------PH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (359)
Q Consensus 134 ~--------~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~ 200 (359)
+ +| |+|++++ .|.++.. .+...|++++.++ .+++++.+|+++|++++++ +|++|+
T Consensus 125 ~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~--------~~~~~G~~v~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v~ 192 (452)
T 2dgk_A 125 WRWRKRMEAAGKPTDKPNLVCGP-VQICWHK--------FARYWDVELREIP--MRPGQLFMDPKRMIEACDE-NTIGVV 192 (452)
T ss_dssp HHHHHHHHHTTCCCSCCEEEESS-CCHHHHH--------HHHHTTCEEEECC--CBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHhcCCCCCCcEEEECC-CcHHHHH--------HHHHcCceEEEEe--cCCCCCeECHHHHHHHHhh-CCEEEE
Confidence 3 55 5888877 6654322 3445576665564 4433689999999999987 889888
Q ss_pred Ec-CCC-CCChhhHHHHHHHHHHc------CCEEEEecccccccccc--CC--CCCCCCCceEEEeCCCCcCCCCCc-eE
Q 018231 201 AG-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVAA--GV--IPSPFEYADVVTTTTHKSLRGPRG-AM 267 (359)
Q Consensus 201 l~-~~n-~g~~~~l~~i~~la~~~------~~~vivD~a~~~g~~~~--~~--~~~~~~~~D~v~~s~~K~l~gp~g-G~ 267 (359)
++ ++| +|.+.|+++|.++|+++ |+++++|++|+.+..++ .. ......++|++++++||++.+|.+ |+
T Consensus 193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 88 777 89999999999999995 99999999998765421 11 111123699999999998877777 99
Q ss_pred EEEeCC
Q 018231 268 IFFRKG 273 (359)
Q Consensus 268 l~~~~~ 273 (359)
++++++
T Consensus 273 ~~~~~~ 278 (452)
T 2dgk_A 273 VIWRDE 278 (452)
T ss_dssp EEESSG
T ss_pred EEEcCH
Confidence 999874
No 74
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.86 E-value=8.5e-21 Score=180.41 Aligned_cols=186 Identities=11% Similarity=0.158 Sum_probs=138.3
Q ss_pred cHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhh-cCCCC
Q 018231 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHD 137 (359)
Q Consensus 59 ~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al-~~~Gd 137 (359)
++++++++.+.+.... + .++. .....+ +++.+++++|.+. .|+++||+.++..++.++ +++||
T Consensus 16 ~~~~~~a~~~~l~~~~---~---~~~~-~~~~~~----l~~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~gd 79 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ---W---WRMG-GDEVNS----FEREFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPGT 79 (388)
T ss_dssp CHHHHHHHHHHHHTSC---C---BTTT-CSHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHHHHcCC---e---eecC-CHHHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCcC
Confidence 4899999999887521 0 1112 233444 4588899999863 599999955888889998 89999
Q ss_pred eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC-CCChhhHHHHH
Q 018231 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIR 216 (359)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~i~ 216 (359)
+|+++.++|.++.. .+...|.+++.+ +++++++.+|+++|++.+++ ++++|+ ++| +|.+.++++|.
T Consensus 80 ~Vi~~~~~~~~~~~--------~~~~~g~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~n~tG~~~~l~~i~ 146 (388)
T 1b9h_A 80 EVIVPAFTFISSSQ--------AAQRLGAVTVPV--DVDAATYNLDPEAVAAAVTP-RTKVIM--PVHMAGLMADMDALA 146 (388)
T ss_dssp EEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCCBCHHHHHHHCCT-TEEEEC--CBCGGGCCCCHHHHH
T ss_pred EEEECCCccHHHHH--------HHHHcCCEEEEE--ecCCCcCCCCHHHHHHhcCc-CceEEE--EeCCccCcCCHHHHH
Confidence 99999988877643 233456555555 45544578999999999986 788776 666 89889999999
Q ss_pred HHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCceEEEEeCC
Q 018231 217 KVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (359)
Q Consensus 217 ~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (359)
++|+++|+++|+|++|+.|..+.+.....+..+++.++|.||+++|+.||+++++++
T Consensus 147 ~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 147 KISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred HHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH
Confidence 999999999999999998776522211111136777778889998888899999875
No 75
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.85 E-value=1.1e-20 Score=179.74 Aligned_cols=237 Identities=13% Similarity=0.093 Sum_probs=160.1
Q ss_pred cCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHH-HHHHHHHHHHHHcC--CCCCCCceeEEECCC
Q 018231 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM-AESLCQKRALEAFR--LDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~-l~~~~~~~~a~~~g--~~~~~~~~~v~~tsG 121 (359)
+.|+|..+++ .+++.+.+++.+.+.... .+|+ .. ..+ +++++.+++.+.+| ++++ +|++|+|
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~~--~~~~lr~~la~~l~~~~g~~~~~~----~v~~t~g 95 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGV-FGYS------RW--KNDEFLAAIAHWFSTQHYTAIDSQ----TVVYGPS 95 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCC------CS--CCHHHHHHHHHHHHHHSCCCCCGG----GEEEESC
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCC-CCCC------CC--ChHHHHHHHHHHHHHhcCCCCCHH----HEEEcCC
Confidence 4688877665 367999999998875421 1222 11 345 77777888888888 4554 4999999
Q ss_pred hH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 018231 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (359)
Q Consensus 122 ~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~ 200 (359)
++ ++.+++.+++++||+|++..+.|.++. ..+...|.++..++++.+..++.+|+++|++.+++.++++|+
T Consensus 96 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~ 167 (390)
T 1d2f_A 96 VIYMVSELIRQWSETGEGVVIHTPAYDAFY--------KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIML 167 (390)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEESCCHHHH--------HHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCcHHHH--------HHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEE
Confidence 99 888899999999999999996665442 233445666655654322113468999999999754788888
Q ss_pred Ec-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCC-C-CCCC-C-ceEEEeCCCCcCC--CCCceEEE
Q 018231 201 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI-P-SPFE-Y-ADVVTTTTHKSLR--GPRGAMIF 269 (359)
Q Consensus 201 l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~-~-~~~~-~-~D~v~~s~~K~l~--gp~gG~l~ 269 (359)
++ ++| +|.+.+ +++|.++|++||+++|+|++|+......... . ..+. + .|. +.|++|+++ |.+.|+++
T Consensus 168 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~ 246 (390)
T 1d2f_A 168 LCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGI 246 (390)
T ss_dssp EESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEE
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEE
Confidence 87 777 886655 8899999999999999999997644321100 0 0111 1 277 999999884 33349999
Q ss_pred EeCCcchhccCCcchhhhHHHhhccccC-CCCCCCCcHHHHHHHHHHHHH
Q 018231 270 FRKGVKEINKQGKEVFYDYEEKINQAVF-PGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 270 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~gt~~~~~i~al~~Al~~ 318 (359)
++++ ++.+.+..... ...+++++.+..+++.++++.
T Consensus 247 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (390)
T 1d2f_A 247 IENS-------------SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ 283 (390)
T ss_dssp ECSH-------------HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH
T ss_pred ECCH-------------HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc
Confidence 8653 44444333211 122357788888888788864
No 76
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.85 E-value=4.4e-21 Score=182.93 Aligned_cols=209 Identities=13% Similarity=0.113 Sum_probs=149.4
Q ss_pred hcCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCC-CcccCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeEEECC
Q 018231 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLS 120 (359)
Q Consensus 46 ~~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~~~v~~ts 120 (359)
.+.|+|..+.+ ++++.+.+++.+.+.+.. +. ...|+...+..++++++.+++.+.+|. +++ +|++|+
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~----~i~~~~ 106 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYD----SVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNAD----NLYMTM 106 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSC----HHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEES
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCC----ccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChH----HEEEcc
Confidence 35788887655 367899999998876520 00 011222344567787888888888885 443 599999
Q ss_pred ChH-HHHHHHHhhcCCC-CeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 018231 121 GSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (359)
Q Consensus 121 G~~-a~~~~~~al~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~ 198 (359)
|++ ++..++.+++++| |+|++.++.|.++. ..+...|.++..++ .+++++.+|+++|++.+++ ++++
T Consensus 107 g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~--------~~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~-~~~~ 175 (398)
T 3ele_A 107 GAAASLSICFRALTSDAYDEFITIAPYFPEYK--------VFVNAAGARLVEVP--ADTEHFQIDFDALEERINA-HTRG 175 (398)
T ss_dssp SHHHHHHHHHHHHCCSTTCEEEEESSCCTHHH--------HHHHHTTCEEEEEC--CCTTTSSCCHHHHHHTCCT-TEEE
T ss_pred CHHHHHHHHHHHHcCCCCCEEEEeCCCchhhH--------HHHHHcCCEEEEEe--cCCcCCcCCHHHHHHHhCc-CCCE
Confidence 999 8888999999999 99999996665442 23445566665554 5545678999999999987 8999
Q ss_pred EEEc-CCC-CCChhh---HHHHHHHHHH------cCCEEEEeccccccccccCCCCC--CCCCceEEEeCCCCcCC--CC
Q 018231 199 IVAG-ASA-YARLYD---YERIRKVCNK------QKAIMLADMAHISGLVAAGVIPS--PFEYADVVTTTTHKSLR--GP 263 (359)
Q Consensus 199 v~l~-~~n-~g~~~~---l~~i~~la~~------~~~~vivD~a~~~g~~~~~~~~~--~~~~~D~v~~s~~K~l~--gp 263 (359)
|+++ ++| +|.+.+ +++|+++|++ ||+++|+|++|+........... ...+.++++.|++|+++ |.
T Consensus 176 v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 255 (398)
T 3ele_A 176 VIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGE 255 (398)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTT
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccc
Confidence 9997 878 887666 6777789999 99999999999753322111111 11136799999999884 33
Q ss_pred CceEEEEeCC
Q 018231 264 RGAMIFFRKG 273 (359)
Q Consensus 264 ~gG~l~~~~~ 273 (359)
+.|+++++++
T Consensus 256 r~G~~~~~~~ 265 (398)
T 3ele_A 256 RIGYVLVPDE 265 (398)
T ss_dssp CCEEEECCTT
T ss_pred eeEEEEEcch
Confidence 3499999885
No 77
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.85 E-value=3e-21 Score=185.09 Aligned_cols=235 Identities=13% Similarity=0.028 Sum_probs=157.0
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
.+.|+|..+.+. +++.+++++ +.+.... .+| +...+..++++.+.+++.+.+|.+.+. .+|++|+|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~~y------~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~t 112 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKPEV-VYY------SHSAGIWELREAFASYYKRRQRVDVKP--ENVLVTNGGS 112 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-CCC------CCTTCCHHHHHHHHHHHHHTSCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-CCC------CCCCCcHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCHH
Confidence 456888877663 578899999 7775421 122 222445677777778887777753221 2499999988
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
++..++.+++++||+|+++++.|.++.. .+...|.++..++ .++ +++.+ +++|++.+++ ++++|++
T Consensus 113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~-~~~l~~~l~~-~~~~v~~ 180 (409)
T 2gb3_A 113 EAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGVKLIPVT--RRMEEGFAI-PQNLESFINE-RTKGIVL 180 (409)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTCEEEEEE--CCGGGTSCC-CTTGGGGCCT-TEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEec--cCCCCCCcc-HHHHHHhhCc-CCeEEEE
Confidence 8888899999999999999977765432 3344566665565 332 24455 8889988877 8898888
Q ss_pred c-CCC-CCCh---hhHHHHHHHHHHcCCEEEEeccccccccccCCCC--CCCCCceEEEeCCCCcCCCC--CceEEEEeC
Q 018231 202 G-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFEYADVVTTTTHKSLRGP--RGAMIFFRK 272 (359)
Q Consensus 202 ~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~--~~~~~~D~v~~s~~K~l~gp--~gG~l~~~~ 272 (359)
+ ++| +|.+ .++++|.++|+++|+++|+|++|+.+........ ..+.+.|++++|+||+++.+ +.|++++++
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 260 (409)
T 2gb3_A 181 SNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRN 260 (409)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSC
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECc
Confidence 7 777 8865 4689999999999999999999986544211100 01124799999999988433 249999887
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 273 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
+ ++.+.+....... . +++.+..+++.++|+
T Consensus 261 ~-------------~l~~~l~~~~~~~-~-~~~~~~~~a~~~~l~ 290 (409)
T 2gb3_A 261 E-------------ELISHAMKLAQGR-L-APPLLEQIGSVGLLN 290 (409)
T ss_dssp H-------------HHHHHHHHHHHHS-C-CCCHHHHHHHHHHHT
T ss_pred H-------------HHHHHHHHHHhcc-C-CCCHHHHHHHHHHHh
Confidence 2 2223222211111 1 556676677767764
No 78
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.85 E-value=2.4e-21 Score=185.33 Aligned_cols=259 Identities=12% Similarity=0.046 Sum_probs=172.0
Q ss_pred cccccChHHHHHHHHHHHHhhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHH
Q 018231 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (359)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~ 103 (359)
++..+.++.+..+.+. ....+.|+|..+++. +++.+++++.+.+.+....+| +...+..++++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~l~~~la~~~~~ 76 (410)
T 3e2y_A 4 RIEGLDSNVWVEFTKL-AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQY------TRGFGHPALVKALSCLYGK 76 (410)
T ss_dssp GGTTCCCCHHHHTTTT-TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSC------CCTTCCHHHHHHHHHHHHH
T ss_pred hhccCCccHHHHHHHH-hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCC------CCCCChHHHHHHHHHHHHH
Confidence 4455566655555432 223467899877763 689999999988765211122 2223456777777788887
Q ss_pred HcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC----
Q 018231 104 AFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN---- 176 (359)
Q Consensus 104 ~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---- 176 (359)
.+|. ++++ +|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..+++...
T Consensus 77 ~~~~~~~~~~---~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~g 145 (410)
T 3e2y_A 77 IYQRQIDPNE---EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGAVPVFIPLRSKPTDG 145 (410)
T ss_dssp HHTSCCCTTT---SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEECCCCS
T ss_pred HhCCCCCCCC---CEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEecccccccc
Confidence 7775 3312 499999998 8888899999999999999966654432 33445666666654321
Q ss_pred ----CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCCh---hhHHHHHHHHHHcCCEEEEeccccccccccC----CCC
Q 018231 177 ----ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIP 243 (359)
Q Consensus 177 ----~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~~----~~~ 243 (359)
..++.+|++++++.+++ ++++|+++ ++| +|.. .++++|+++|++||+++|+|++|+....... +..
T Consensus 146 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 224 (410)
T 3e2y_A 146 MKWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIAT 224 (410)
T ss_dssp SCCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred ccccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHH
Confidence 13456899999999987 89999887 777 8866 5799999999999999999999975332211 111
Q ss_pred CC-CCCceEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 244 SP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 244 ~~-~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
.. ..+.++++.|++|+++ |.+.|++++++ ++.+.+..... ....+++.+...++.++++.
T Consensus 225 ~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~ 287 (410)
T 3e2y_A 225 LPGMWERTITIGSAGKTFSVTGWKLGWSIGPA--------------HLIKHLQTVQQ-NSFYTCATPLQAALAEAFWI 287 (410)
T ss_dssp STTCGGGEEEEEEHHHHSSCGGGCCEEEECCH--------------HHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHH
T ss_pred cCCccCeEEEEecchhhcCCCCceEEEEEECH--------------HHHHHHHHHHH-hhccCCChHHHHHHHHHHHh
Confidence 11 0135688999999884 33349998877 44443332211 12345566777777777763
No 79
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.85 E-value=2e-20 Score=178.93 Aligned_cols=261 Identities=15% Similarity=0.076 Sum_probs=167.5
Q ss_pred hccccccccChHHHHHHHHHHHH--hh--cCceeeCCCC----CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHH
Q 018231 22 QLNAPLEVVDPEIADIIEHEKAR--QW--KGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (359)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~--~~--~~i~l~~~~~----~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l 93 (359)
+++++++.+.+..+..+.+.... .. +.|+|..+.. .+++.+.+++.+.+.+.. .... |+......++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~----~~~~-y~~~~~~~~l 80 (407)
T 2zc0_A 6 YLAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEP----KSVM-YTPANGIPEL 80 (407)
T ss_dssp GSCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG----GGGS-CCCTTCCHHH
T ss_pred hhhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc----cccc-CCCCCCCHHH
Confidence 34555666666655555443331 23 5688876543 256889999988876521 0011 3333446777
Q ss_pred HHHHHHHHHHHcCC--CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEE
Q 018231 94 ESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (359)
Q Consensus 94 ~~~~~~~~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (359)
++++.+++.+.+|. +++ +|++|+|++ ++..++.+++++||+|++..+.|.++. ..+...|.++..
T Consensus 81 ~~~la~~~~~~~g~~~~~~----~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~ 148 (407)
T 2zc0_A 81 REELAAFLKKYDHLEVSPE----NIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTL--------LAFEQLGAKIEG 148 (407)
T ss_dssp HHHHHHHHHHHSCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCCcc----eEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCCEEEE
Confidence 77777777777784 443 499999988 888899999999999999996665432 233445666655
Q ss_pred EecccCCCCCCCCHHHHHHHhh----h-hCCcEEE-Ec-CCC-CCChhhHH---HHHHHHHHcCCEEEEecccccccccc
Q 018231 171 MPYRLNESTGYIDYDQLEKSAT----L-FRPKLIV-AG-ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAA 239 (359)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~----~-~~~k~v~-l~-~~n-~g~~~~l~---~i~~la~~~~~~vivD~a~~~g~~~~ 239 (359)
++ .+ +++ +|+++|++.++ + .++++|+ ++ ++| +|.+.|.+ +|.++|++||+++|+|++|+.+....
T Consensus 149 v~--~~-~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 224 (407)
T 2zc0_A 149 VP--VD-NDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG 224 (407)
T ss_dssp EE--EE-TTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSC
T ss_pred cc--cC-CCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 65 44 223 89999999987 4 2678875 44 667 88777665 99999999999999999997654321
Q ss_pred C----CCCCCCCCceEEEeCCCCcCCC-CCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHH
Q 018231 240 G----VIPSPFEYADVVTTTTHKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAV 314 (359)
Q Consensus 240 ~----~~~~~~~~~D~v~~s~~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~ 314 (359)
. +......+.++++.|++|++++ .+.|++++++ ++.+.+........++ ++.....++.+
T Consensus 225 ~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 289 (407)
T 2zc0_A 225 GDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEG--------------EILKKVLMQKQPIDFC-APAISQYIALE 289 (407)
T ss_dssp SSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCH--------------HHHHHHHHHHTTTTSS-SCHHHHHHHHH
T ss_pred CCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCH--------------HHHHHHHHHHHhhcCC-CCHHHHHHHHH
Confidence 1 1111101256888999999872 2359999876 4444444332222222 34555566666
Q ss_pred HHHH
Q 018231 315 ALKQ 318 (359)
Q Consensus 315 Al~~ 318 (359)
+++.
T Consensus 290 ~l~~ 293 (407)
T 2zc0_A 290 YLKR 293 (407)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 6654
No 80
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.85 E-value=1.6e-20 Score=185.48 Aligned_cols=207 Identities=14% Similarity=0.060 Sum_probs=151.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCC--CCCceeEEECCChH-HHHHHHHhhcCCC--------CeeeecCCCCCcccCccccc
Q 018231 88 EYIDMAESLCQKRALEAFRLDP--EKWGVNVQSLSGSP-SNFQVYTALLKPH--------DRIMALDLPHGGHLSHGYQT 156 (359)
Q Consensus 88 ~~~~~l~~~~~~~~a~~~g~~~--~~~~~~v~~tsG~~-a~~~~~~al~~~G--------d~Vl~~~~~~~~~~~~~~~~ 156 (359)
....++++.+++++++++|++. +. ...++|+|++ ++..++.++.++| |+|+++.+.|.++..
T Consensus 135 p~~~~le~~l~~~la~~~g~~~~~~~--v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~----- 207 (514)
T 3mad_A 135 PSTAKFEAEVVAMTAHMLGGDAAGGT--VCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK----- 207 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTTGGGGTSC--CEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH-----
T ss_pred hHHHHHHHHHHHHHHHHcCCCCccCC--cceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH-----
Confidence 4567788888899999999873 32 1238889988 8888888887776 999999977765432
Q ss_pred cccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccc
Q 018231 157 DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHIS 234 (359)
Q Consensus 157 ~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~ 234 (359)
.+...|.+++.++ .+ +++.+|+++|++++++ ++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.
T Consensus 208 ---~~~~~G~~v~~v~--~~-~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~ 280 (514)
T 3mad_A 208 ---AAQYFGIKLVRTP--LD-ADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGG 280 (514)
T ss_dssp ---HHHHHTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred ---HHHHcCCeeEEee--eC-CCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccccc
Confidence 4445576666665 55 4688999999999987 89999888 777 89999999999999999999999999976
Q ss_pred cccc----cCC--CCC--CCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCCcchhhhHHHhhc--c-------cc
Q 018231 235 GLVA----AGV--IPS--PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKIN--Q-------AV 296 (359)
Q Consensus 235 g~~~----~~~--~~~--~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~--~-------~~ 296 (359)
+..+ .+. ... ...++|++++|+||++.++.+ |+++++++. +..... . ..
T Consensus 281 ~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 347 (514)
T 3mad_A 281 FILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPD-------------LLHYQYFIAADWPGGLYF 347 (514)
T ss_dssp TTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHH-------------HHTTTCEEESSCTTCSEE
T ss_pred ccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHH-------------HhccccccccccCCCccc
Confidence 5442 010 011 112589999999999877777 999998842 111000 0 00
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 297 FPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 297 ~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
.+...|+++...++++.++++.+..
T Consensus 348 ~~~~~gs~~~~~~~a~~aal~~l~~ 372 (514)
T 3mad_A 348 SPTFAGSRPGALSATAWAAMLSLGE 372 (514)
T ss_dssp ESSSCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCchHHHHHHHHHHHHHhH
Confidence 1122477888888888888877654
No 81
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.85 E-value=5.7e-21 Score=182.22 Aligned_cols=233 Identities=14% Similarity=0.112 Sum_probs=158.9
Q ss_pred cCceeeCCCC-C--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 47 KGLELIPSEN-F--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 47 ~~i~l~~~~~-~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
..++|..+++ . +++.+.+++.+.+... ..++... ....+..++.+.+++++++++|.+ ++++|+|++
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~------~v~~~~ggt 113 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEKY-GTGCAGS---RFLNGTLDIHVELEEKLSAYVGKE------AAILFSTGF 113 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHHH-CSCCCSB---TTTTCCCHHHHHHHHHHHHHHTCS------EEEEESSHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHHc-CCCCCCc---CcccCCcHHHHHHHHHHHHHhCCC------cEEEECCHH
Confidence 4578877754 2 6889999999887642 1122111 111222344555779999999974 388888888
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh---CCcEE
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLI 199 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~~k~v 199 (359)
++..++.++++|||.|++.++.|+++.. .+...|.++..++ . +|+++|++.+++. ++++|
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~~~~~v~--~------~d~~~l~~~l~~~~~~~~~~v 177 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASIID--------GSRLSFSKVIKYG--H------NNMEDLRAKLSRLPEDSAKLI 177 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSSEEEEEC--T------TCHHHHHHHHHTSCSSSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCCceEEeC--C------CCHHHHHHHHHhhccCCceEE
Confidence 8888999999999999999977765533 3344566555453 2 4899999999763 68888
Q ss_pred EEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccc---cCCCC-CCCC-CceEEEeCCCCcCCCCCceEEEEeC
Q 018231 200 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA---AGVIP-SPFE-YADVVTTTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 200 ~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~---~~~~~-~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (359)
+++ ++| +|...|+++|.++|++||+++|+|++|+.+... ..... .+.. .+|++++|+||+++ |.||++++++
T Consensus 178 ~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~ 256 (398)
T 3a2b_A 178 CTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA 256 (398)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH
Confidence 887 666 898999999999999999999999999876542 11100 0111 26999999999885 6679999876
Q ss_pred CcchhccCCcchhhhHHHhhccccCC-CCCCCCcHHHHHHHHHHHHHHh
Q 018231 273 GVKEINKQGKEVFYDYEEKINQAVFP-GLQGGPHNHTITGLAVALKQVC 320 (359)
Q Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~gt~~~~~i~al~~Al~~~~ 320 (359)
++.+.+.....+ ...++++....+++.++++.+.
T Consensus 257 --------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 291 (398)
T 3a2b_A 257 --------------DVIDFLKHNARSVMFSASMTPASVASTLKALEIIQ 291 (398)
T ss_dssp --------------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHh
Confidence 444443321100 1224556666666667787653
No 82
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.85 E-value=1.9e-21 Score=186.23 Aligned_cols=260 Identities=13% Similarity=0.061 Sum_probs=168.2
Q ss_pred cccccccChHHHHHHHHHHHH--hhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHH
Q 018231 24 NAPLEVVDPEIADIIEHEKAR--QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (359)
++++..+.++.+..+.+.... ..+.|+|..+++. +++.+++++.+.+......+| +......++++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~ 96 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKY------GAFHGKEAFKQAIVD 96 (404)
T ss_dssp CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSC------CCTTCCHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCC------CCCCCCHHHHHHHHH
Confidence 444455555555444433221 1246888877764 578999999887743110122 222345677777777
Q ss_pred HHHHHcCCC--CCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 100 RALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 100 ~~a~~~g~~--~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
++++.+|++ +++ +|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .+
T Consensus 97 ~~~~~~g~~~~~~~---~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~ 163 (404)
T 2o1b_A 97 FYQRQYNVTLDKED---EVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADGKPVPLN--LE 163 (404)
T ss_dssp HHHHHHCCCCCTTT---SEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTCEEEEEE--CC
T ss_pred HHHHHhCCCCCCcc---cEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEec--cC
Confidence 777777974 212 499999999 8888999999999999999977665432 3344566665554 44
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc---CCCCCC-CC
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSP-FE 247 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~---~~~~~~-~~ 247 (359)
++++.+|+++|++.+++ ++++|+++ ++| +|... ++++|.++|+++|+++|+|++|+...... ...... ..
T Consensus 164 ~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 242 (404)
T 2o1b_A 164 PPHYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGK 242 (404)
T ss_dssp TTTCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHH
T ss_pred cccCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCC
Confidence 34567899999999876 78999988 777 88665 47889999999999999999997644321 111110 01
Q ss_pred CceEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 248 ~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+.|+++.|++|+|+ |.+.|++++++ ++.+.+..... ...++++.+..+++.++|+.
T Consensus 243 ~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~ 300 (404)
T 2o1b_A 243 DVAIEIYSLSKGYNMSGFRVGFAVGNK--------------DMIQALKKYQT-HTNAGMFGALQDAAIYALNH 300 (404)
T ss_dssp HHEEEEEESTTTTTCGGGCCEEEEECH--------------HHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHH
T ss_pred CCEEEEEecchhccCchhheEeEecCH--------------HHHHHHHHHHh-hccCCCCHHHHHHHHHHHhc
Confidence 36799999999884 33349988876 44443332111 11245667777777777765
No 83
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.85 E-value=2.2e-20 Score=183.97 Aligned_cols=199 Identities=11% Similarity=0.021 Sum_probs=146.3
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeEEECCChH-HHHHHHHhh
Q 018231 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTAL 132 (359)
Q Consensus 56 ~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~--~~~~~~~v~~tsG~~-a~~~~~~al 132 (359)
.++++.+.+++.+.+...+ .++ .......++++.+++++++++|++ +++. ..-++|+|++ ++..++.++
T Consensus 66 ~~~~~~v~~~l~~~~~~~~--~~~-----~~~p~~~~le~~~~~~la~l~g~~~~~~~~-~~g~~t~ggtea~~~a~~a~ 137 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNAPLEEAET-AVGVGTVGSSEAIMLAGLAF 137 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBT--TCT-----TTCHHHHHHHHHHHHHHHHHTTCCCCSSCC-CEEEEESSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCC--CCh-----hcChhHHHHHHHHHHHHHHHhCCCcccccC-CcceecCcHHHHHHHHHHHH
Confidence 4568899999998876533 111 122446788888999999999997 4431 1233577777 877777777
Q ss_pred cCC--------CC-----eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 018231 133 LKP--------HD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (359)
Q Consensus 133 ~~~--------Gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v 199 (359)
..+ || +|+++...|.++. ..+...|.+++.++ .+++++.+|+++|++.+++ +|++|
T Consensus 138 ~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~--------~~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v 206 (502)
T 3hbx_A 138 KRKWQNKRKAEGKPVDKPNIVTGANVQVCWE--------KFARYFEVELKEVK--LSEGYYVMDPQQAVDMVDE-NTICV 206 (502)
T ss_dssp HHHHHHHHHHTTCCCSCCEEEEETTCCHHHH--------HHHHHTTCEEEEEC--CBTTBCSCCHHHHHHHCCT-TEEEE
T ss_pred HHHHhHHHHhcCCCCCCcEEEEcCCchHHHH--------HHHHHcCceeEEEe--cCCCcCcCCHHHHHHHHhh-CCEEE
Confidence 554 77 8999886666532 24455677776665 4534589999999999988 88888
Q ss_pred EEc-CCC-CCChhhHHHHHHHHHHc------CCEEEEecccccccccc--CCCCCC--CCCceEEEeCCCCcCCCCCc-e
Q 018231 200 VAG-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVAA--GVIPSP--FEYADVVTTTTHKSLRGPRG-A 266 (359)
Q Consensus 200 ~l~-~~n-~g~~~~l~~i~~la~~~------~~~vivD~a~~~g~~~~--~~~~~~--~~~~D~v~~s~~K~l~gp~g-G 266 (359)
+++ ++| +|.+.|+++|.++|+++ |+++++|+||+.+..+. +..... ..++|++++++||++.+|.| |
T Consensus 207 ~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G 286 (502)
T 3hbx_A 207 AAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIG 286 (502)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCE
T ss_pred EEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeE
Confidence 877 777 89999999999999999 99999999998665321 111111 23699999999999988888 8
Q ss_pred EEEEeCC
Q 018231 267 MIFFRKG 273 (359)
Q Consensus 267 ~l~~~~~ 273 (359)
+++++++
T Consensus 287 ~~~~~~~ 293 (502)
T 3hbx_A 287 WVIWRNK 293 (502)
T ss_dssp EEEESSG
T ss_pred EEEEeCH
Confidence 8888764
No 84
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.85 E-value=1.2e-20 Score=182.07 Aligned_cols=210 Identities=11% Similarity=0.035 Sum_probs=148.3
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
.+.|+|..++++ +++.+++++.+.+.+....+|+ ...+..++++.+.+++.+.+|.+.+. .+|++|+|++
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~~la~~~~~~~g~~~~~--~~i~~t~g~t 115 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYP------NLDGLPELKQEASRFAKLFVNIDIPA--RACVPTVGSM 115 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCC------CTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCC------CCCChHHHHHHHHHHHHHhhCCCCCc--ccEEEeCCHH
Confidence 467899887764 5899999999887742112332 22345677777777777777753211 2599999999
Q ss_pred -HHHHHHHhhc--CCCC--eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 018231 124 -SNFQVYTALL--KPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (359)
Q Consensus 124 -a~~~~~~al~--~~Gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~ 198 (359)
++..++.+++ ++|| +|+++.+.|.++. ..+...|.+++.+++. ++++.+|+++|++++...++++
T Consensus 116 ~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~--------~~~~~~g~~~~~v~~~--~~~~~~d~~~l~~~l~~~~~~~ 185 (437)
T 3g0t_A 116 QGCFVSFLVANRTHKNREYGTLFIDPGFNLNK--------LQCRILGQKFESFDLF--EYRGEKLREKLESYLQTGQFCS 185 (437)
T ss_dssp HHHHHHHHHHTTSCTTCSCCEEEEESCCHHHH--------HHHHHHTCCCEEEEGG--GGCTTHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHHhcCCCCCccEEEEeCCCcHhHH--------HHHHHcCCEEEEEeec--CCCCccCHHHHHHHHhcCCceE
Confidence 8888889998 9999 9999986665432 2344567777667643 3567899999999993338999
Q ss_pred EEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCCC-------CC---CCCceEEEeCCCCcCC--
Q 018231 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-------SP---FEYADVVTTTTHKSLR-- 261 (359)
Q Consensus 199 v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~-------~~---~~~~D~v~~s~~K~l~-- 261 (359)
|+++ ++| +|...+ +++|+++|++||+++|+|++|+.......... .. ..+.+++++|++|+++
T Consensus 186 v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 265 (437)
T 3g0t_A 186 IIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYA 265 (437)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCG
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCc
Confidence 9887 877 886654 77889999999999999999975433211000 01 1246799999999874
Q ss_pred CCCceEEEEeCC
Q 018231 262 GPRGAMIFFRKG 273 (359)
Q Consensus 262 gp~gG~l~~~~~ 273 (359)
|.+.|+++++++
T Consensus 266 G~r~G~~~~~~~ 277 (437)
T 3g0t_A 266 GQRIGVLMISGK 277 (437)
T ss_dssp GGCCEEEEECHH
T ss_pred cceeEEEEECHH
Confidence 233499998863
No 85
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.85 E-value=7.7e-21 Score=180.60 Aligned_cols=196 Identities=10% Similarity=0.084 Sum_probs=138.9
Q ss_pred CceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHH-HHHcCCCCCCCceeEEECCChHHHH
Q 018231 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA-LEAFRLDPEKWGVNVQSLSGSPSNF 126 (359)
Q Consensus 48 ~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~-a~~~g~~~~~~~~~v~~tsG~~a~~ 126 (359)
.|.+..++-++++.+++++.+.+.+.+ +.+......++ ++.+ ++++|... . .|++++|+.++.
T Consensus 4 ~i~~~~p~~~~~~~i~~a~~~~~~~~~--------~~~~~~~~~~l----~~~~~a~~~g~~~-~---~v~~~sgt~al~ 67 (377)
T 3ju7_A 4 NIPFLRASTVPVIEYLDELKEIDASHI--------YTNYGPINQRF----EQTIMSGFFQNRG-A---VTTVANATLGLM 67 (377)
T ss_dssp CBCSCCCCCCCGGGGHHHHHHHHHHTC--------CSSSCHHHHHH----HHHHHHHTSTTCS-E---EEEESCHHHHHH
T ss_pred eeeccCCCCCCcHHHHHHHHHHHHcCC--------cccCCHHHHHH----HHHHHHHHhCCCC-e---EEEeCCHHHHHH
Confidence 366666666778899999999887632 11101334444 4778 99999322 1 344445544887
Q ss_pred HHHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHh-hhhC--CcEEEEc
Q 018231 127 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA-TLFR--PKLIVAG 202 (359)
Q Consensus 127 ~~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i-~~~~--~k~v~l~ 202 (359)
.++.++ ++|||+|++++++|.++.. .+...|++++.++ ++++++.+|++++++++ ++ + ||+|+
T Consensus 68 ~al~~l~~~~Gd~Vi~~~~~~~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~~-~~~tk~v~-- 134 (377)
T 3ju7_A 68 AAIQLKKRKKGKYALMPSFTFPATPL--------AAIWCGLEPYFID--ISIDDWYMDKTVLWDKIEEL-KEEVAIVV-- 134 (377)
T ss_dssp HHHHHHSCTTCCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTCSBCHHHHHHHHHHH-GGGEEEEC--
T ss_pred HHHHHcCCCCcCEEEECCCCcHHHHH--------HHHHcCCEEEEEe--cCCccCCcCHHHHHHHHhcC-CCCceEEE--
Confidence 788888 9999999999988876543 2334576665554 55467899999999988 55 6 88876
Q ss_pred CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCC-CCCCCceEEEeCCCCcCCCCCceEEEEeCC
Q 018231 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (359)
Q Consensus 203 ~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~-~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (359)
++| +|...|+++|.++|+ ||++||+|++|+.|....+... ..+..++++++++||+++++.||+++++++
T Consensus 135 ~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~ 206 (377)
T 3ju7_A 135 PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE 206 (377)
T ss_dssp CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCH
Confidence 344 788899999999999 9999999999998876433222 112235566666889998777788888774
No 86
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.85 E-value=3e-20 Score=172.93 Aligned_cols=222 Identities=14% Similarity=0.101 Sum_probs=154.5
Q ss_pred hhcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 45 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 45 ~~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.++.|+|..++++ +++.+++++.+.+.... +| +. ....+ +++.+++++|++++ +|++|+|+
T Consensus 15 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~--~y------~~-~~~~~----lr~~la~~~~~~~~----~i~~t~G~ 77 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAVEPRVQAAIAAAAARIN--RY------PF-DAEPR----VMRKLAEHFSCPED----NLMLVRGI 77 (337)
T ss_dssp CCCCEECSSCCCCSCCCHHHHHHHHHHGGGTT--SC------CT-THHHH----HHHHHHHHHTSCGG----GEEEESHH
T ss_pred CCCceEeeCCCCCCCCCHHHHHHHHHhhhhhc--cC------CC-CchHH----HHHHHHHHhCcCHH----HEEEeCCH
Confidence 3467999998885 68999999998776421 22 21 33444 45788888999775 49999999
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+ ++..++.++ +||+|++.++.|.++. ..+...|.++..++ .+ +++.+|++++++. . +++++++
T Consensus 78 ~~~l~~~~~~~--~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~--~-~~~~v~i 141 (337)
T 3p1t_A 78 DECFDRISAEF--SSMRFVTAWPGFDGYR--------ARIAVSGLRHFEIG--LT-DDLLLDPNDLAQV--S-RDDCVVL 141 (337)
T ss_dssp HHHHHHHHHHS--TTSEEEEESSSCSHHH--------HHHTTSCCEEEEEC--BC-TTSSBCHHHHTTC--C-TTEEEEE
T ss_pred HHHHHHHHHhc--CCCeEEEeCCCcHHHH--------HHHHHcCCEEEEec--CC-CCCCCCHHHHHhh--c-CCCEEEE
Confidence 9 777676666 9999999996665542 23445576665554 55 4678999999875 3 6888888
Q ss_pred c-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCC--CCCceEEEEeCCcchh
Q 018231 202 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (359)
Q Consensus 202 ~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (359)
+ ++| +|.+.|++++.++|+++++ +|+|++|+.- ...........+.++++.|++|+++ |.+.|++++++
T Consensus 142 ~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~-~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~----- 214 (337)
T 3p1t_A 142 ANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDY-SSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPS----- 214 (337)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGG-SSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCH-----
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhh-ccccccccccCCCEEEEeeCchhccCcchheEEEEeCH-----
Confidence 7 878 9999999999999999997 5669998631 1111111112247899999999884 44449998877
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 278 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 278 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.+.+.... ..++++.+...++.++++.
T Consensus 215 ---------~~~~~l~~~~---~~~~~~~~~~~a~~~~l~~ 243 (337)
T 3p1t_A 215 ---------ELIAAMKRKQ---WFCNVGTLDLHALEAALDN 243 (337)
T ss_dssp ---------HHHHHHHTTS---CTTCSCHHHHHHHHHHHTC
T ss_pred ---------HHHHHHHhhc---CCCCCCHHHHHHHHHHhCC
Confidence 4555544321 2356777777777776653
No 87
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.85 E-value=6.7e-21 Score=183.29 Aligned_cols=225 Identities=14% Similarity=0.131 Sum_probs=149.3
Q ss_pred ccChHHH---HHHHHHHHHhhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHc
Q 018231 29 VVDPEIA---DIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (359)
Q Consensus 29 ~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~ 105 (359)
.+++++. ..+.++..++...+...+.+|. +.|++++.+........+......|+. ...++ +++.+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-~g~~~----Le~~lA~l~ 87 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYND-IGRDS----LDRVYANIF 87 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHH----HHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCc-hhHHH----HHHHHHHHh
Confidence 3456666 4444444444456666666655 789999888644311001111111222 22343 558899999
Q ss_pred CCCCCCCceeEE---ECCChHHHHHHHHhhcCCCCeeeecC-CCCCcccCcc---ccccccceeeeeeeeEEEecccCCC
Q 018231 106 RLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHG---YQTDTKKISAVSIFFETMPYRLNES 178 (359)
Q Consensus 106 g~~~~~~~~~v~---~tsG~~a~~~~~~al~~~Gd~Vl~~~-~~~~~~~~~~---~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (359)
|++. .++ ++||+.++..++.++++|||+|++.+ +.|+++.... .......+...|.+++.++ . +
T Consensus 88 g~e~-----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~--~--~ 158 (427)
T 3hvy_A 88 NTES-----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVD--L--K 158 (427)
T ss_dssp TCSE-----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECC--C--B
T ss_pred CCCc-----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEec--C--C
Confidence 9875 355 56666688889999999999999998 7776543100 0000011223465555554 3 3
Q ss_pred CCCCCHHHHHHHhhh-hCCcEEEEcC-----CC-CCChhhHHHHHHHHHH--cCCEEEEeccccccccccCCCCCCCCCc
Q 018231 179 TGYIDYDQLEKSATL-FRPKLIVAGA-----SA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYA 249 (359)
Q Consensus 179 ~~~~d~e~l~~~i~~-~~~k~v~l~~-----~n-~g~~~~l~~i~~la~~--~~~~vivD~a~~~g~~~~~~~~~~~~~~ 249 (359)
++.+|++++++++++ .+||+|+++. +| +|.+.|+++|.++|++ +|+++++|++|+.+......... ++
T Consensus 159 ~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~---ga 235 (427)
T 3hvy_A 159 DGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDV---GA 235 (427)
T ss_dssp TTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGG---TC
T ss_pred CCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCccc---CC
Confidence 578999999999983 3899999864 44 6788999999999999 89999999999776632211112 48
Q ss_pred eEEEeCCCCcCCC---CCceEEEEeC
Q 018231 250 DVVTTTTHKSLRG---PRGAMIFFRK 272 (359)
Q Consensus 250 D~v~~s~~K~l~g---p~gG~l~~~~ 272 (359)
|++++|+||+++| +.||++++++
T Consensus 236 Div~~S~sK~lgg~g~~~GG~i~~~~ 261 (427)
T 3hvy_A 236 DIIAGSLIKNIGGGIATTGGYIAGKE 261 (427)
T ss_dssp SEEEEETTSGGGTTTCCSCEEEEECH
T ss_pred eEEEECCcccccccccceEEEEEECH
Confidence 9999999999987 7789999987
No 88
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.85 E-value=1.9e-20 Score=177.66 Aligned_cols=233 Identities=15% Similarity=0.146 Sum_probs=159.4
Q ss_pred cCceeeCCCC---CCcHHHHHHHHhhhhccCCCCCCCCcc-cCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~---~~~~~v~~al~~~~~~~~~~g~~~~~~-~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
..+++..+++ ++++.+++++.+.+.+ +..+++..++ ++......+ +++.+++++|++. .+++++|+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~-----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQA----LEEELAEWLGYSR-----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHH----HHHHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEeCCcH
Confidence 4688888775 4689999999988765 2112222211 122233333 5588888889852 58888886
Q ss_pred HHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEE
Q 018231 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIV 200 (359)
Q Consensus 123 ~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~~k~v~ 200 (359)
.++..++.+++++||.|++..+.|+++.. .+...|.++..++ . .|+++|++.+++. ++++++
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLLE--------AASLSPSQLRRFA--H------NDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSSEEEEEC--T------TCHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCCCEEEeC--C------CCHHHHHHHHHhcCCCCeEEE
Confidence 67777888999999999999977765432 2334565554443 2 3899999998763 267777
Q ss_pred Ec-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccc---cCC-CCCCCCCceEEEeCCCCcCCCCCceEEEEeCCc
Q 018231 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA---AGV-IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV 274 (359)
Q Consensus 201 l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~---~~~-~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~ 274 (359)
++ ++| +|.+.|+++|.++|++||+++|+|++|+.|... ... ...+ .+.|++++|+||+++ |.||++++++
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~di~~~s~sK~~~-~~GG~~~~~~-- 249 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFG-VSGAAVLCSS-- 249 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTS-SCCEEEEECH--
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcC-CCCcEEEeeccchhh-ccCcEEEeCH--
Confidence 77 777 899999999999999999999999999877542 110 0011 137999999999885 7789999976
Q ss_pred chhccCCcchhhhHHHhhccccCCCCC-CCCcHHHHHHHHHHHHHHhc
Q 018231 275 KEINKQGKEVFYDYEEKINQAVFPGLQ-GGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 275 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-gt~~~~~i~al~~Al~~~~~ 321 (359)
++.+.+.....+... ++++....+++.++++.+.+
T Consensus 250 ------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 285 (384)
T 1bs0_A 250 ------------TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRS 285 (384)
T ss_dssp ------------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHS
T ss_pred ------------HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhc
Confidence 444433321101111 35778888888888987763
No 89
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.84 E-value=7.9e-20 Score=172.68 Aligned_cols=234 Identities=12% Similarity=0.061 Sum_probs=162.5
Q ss_pred CceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeEEECCChH
Q 018231 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP 123 (359)
Q Consensus 48 ~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~~~v~~tsG~~ 123 (359)
.|+|..++++ +++.+.+++.+.+.+... . ...|+.... .++++.+.+++.+.+|. +++ +|++|+|++
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~-~---~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~----~v~~~~G~~ 102 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIAT-E---LNRYPERDA-VELRDELAAYITKQTGVAVTRD----NLWAANGSN 102 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGG-G---TTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGG----GEEEESHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhccc-c---cccCCCccH-HHHHHHHHHhhhhcccCCCChH----hEEECCChH
Confidence 3889888774 578999999988764200 0 011222223 46776677777776554 443 499999999
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
++..++.+++++||+|+++++.|+++.. .+...|.++..++ .+ +++.+|++++++.+++.++++|+++
T Consensus 103 ~al~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~ 171 (369)
T 3cq5_A 103 EILQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHTEFIAVS--RG-ADFRIDMDVALEEIRAKQPDIVFVT 171 (369)
T ss_dssp HHHHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTCEEEEEE--CC-TTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEec--CC-cCCCCCHHHHHHHhhccCCCEEEEe
Confidence 8877889999999999999977765432 3344566665554 44 4568999999999876579999887
Q ss_pred -CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCC-CCCC-ceEEEeCCCCcCCCC--CceEEEEeCCcch
Q 018231 203 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEY-ADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (359)
Q Consensus 203 -~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~-~~~~-~D~v~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (359)
++| +|...|++++.++|+.+++++|+|++|+.+......... ...+ .++++.|++|+++.+ +.|++++++
T Consensus 172 ~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---- 247 (369)
T 3cq5_A 172 TPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP---- 247 (369)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT----
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH----
Confidence 777 899999999999999999999999999866532111110 1113 569999999988522 339999987
Q ss_pred hccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 277 INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 277 ~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.+.+..... ..+++.+..+++.++++.
T Consensus 248 ----------~~~~~l~~~~~---~~~~~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 248 ----------AFIDAVMLVRL---PYHLSALSQAAAIVALRH 276 (369)
T ss_dssp ----------HHHHHHHTTSC---TTCSCHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHcCC---CCCCCHHHHHHHHHHhcC
Confidence 55555443221 235677777777777764
No 90
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.84 E-value=6.4e-21 Score=182.09 Aligned_cols=207 Identities=11% Similarity=0.046 Sum_probs=147.8
Q ss_pred CceeeCCC-C--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeEEECCCh
Q 018231 48 GLELIPSE-N--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~~-~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~--~~~~~~~v~~tsG~ 122 (359)
.|+|..+. + ++++.|++++.+.+.+....+| +...+..++++.+++++++++|.+ +++ +|++|+|+
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~l~~~l~~~l~~~~g~~~~~~~---~i~~~~g~ 111 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAY------TEYRGDLGIRDLLAPRLAAFTGAPVDARD---GLIITPGT 111 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHS------CCTTCCHHHHHHHHHHHHHHHTSCCCTTT---SEEEESHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCc------CCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEeCCc
Confidence 57887633 3 4688999999988764210012 222344667777889999999984 222 49999999
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc---CCCCCCCCHHHHHHHhhhhCCcE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---NESTGYIDYDQLEKSATLFRPKL 198 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~~~~d~e~l~~~i~~~~~k~ 198 (359)
+ ++..++.+++++||+|++..+.|.++.. .+...|.++..+++.. +++++.+|+++|++.+++ ++++
T Consensus 112 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~ 182 (407)
T 3nra_A 112 QGALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARV 182 (407)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCcccchHH--------HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcE
Confidence 9 8888889999999999999977765432 3445566666665421 125678999999999987 8999
Q ss_pred EEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc----CCCCCC--CCCceEEEeCCCCcCC--CCCc
Q 018231 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSP--FEYADVVTTTTHKSLR--GPRG 265 (359)
Q Consensus 199 v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~--~~~~D~v~~s~~K~l~--gp~g 265 (359)
|+++ ++| +|.+.+ +++|+++|++||+++|+|++|+.+.... .+.... ..+.++++.|++|+++ |.+.
T Consensus 183 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~ 262 (407)
T 3nra_A 183 FLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRL 262 (407)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCC
T ss_pred EEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeE
Confidence 8887 877 887776 8899999999999999999997644321 111110 1136799999999875 3334
Q ss_pred eEEEEeC
Q 018231 266 AMIFFRK 272 (359)
Q Consensus 266 G~l~~~~ 272 (359)
|++++++
T Consensus 263 G~~~~~~ 269 (407)
T 3nra_A 263 GVAFGSR 269 (407)
T ss_dssp EEEEECH
T ss_pred EEEEcCH
Confidence 9988876
No 91
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.84 E-value=3.1e-20 Score=175.59 Aligned_cols=248 Identities=14% Similarity=0.016 Sum_probs=162.9
Q ss_pred ChHHHHHHHHHHHHh---hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHc
Q 018231 31 DPEIADIIEHEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (359)
Q Consensus 31 ~~~~~~~~~~~~~~~---~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~ 105 (359)
.++.+..+.+..... .+.|+|..++++ +|+.+++++.+.+.... +| +...+..++++.+.+++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y------~~~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 5 EPYPFERLRALLKEITPKKRGLDLGIGEPQFETPKFIQDALKNHTHSLN--IY------PKSAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCCHHHHHHHHHTTCCCSSCCCBCSSCCCCSCCCHHHHHHHHTTGGGGG--SC------CCTTCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhhhccCCEEEeCCCCCCCCCCHHHHHHHHHhhhhcC--CC------CCCCCCHHHHHHHHHHHHHHh
Confidence 344455554433221 156888877764 57899999988763311 22 222445677777888888888
Q ss_pred CC--CCCCCceeEEECCChH-HHHHHHHhhcCC--CCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCC
Q 018231 106 RL--DPEKWGVNVQSLSGSP-SNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (359)
Q Consensus 106 g~--~~~~~~~~v~~tsG~~-a~~~~~~al~~~--Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (359)
|+ +++ +|++|+|++ ++..++.+++++ ||+|++..+.|.++.. .+...|.++..++ .+.+ .
T Consensus 77 g~~~~~~----~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~~~-~ 141 (376)
T 3ezs_A 77 KIELKEN----ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKAKSLLMP--LTKE-N 141 (376)
T ss_dssp SCCCCGG----GEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGG-G
T ss_pred CCCCCHH----HEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCCEEEEcc--cCCC-C
Confidence 97 444 499999999 888789999999 9999999966654422 3445566665565 3322 2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCCCC-C--------C
Q 018231 181 YIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-P--------F 246 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~-~--------~ 246 (359)
.+++ ++++.+.+ ++++++++ ++| +|...+ +++|.++|++||+++|+|++|+........... . .
T Consensus 142 ~~~~-~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (376)
T 3ezs_A 142 DFTP-SLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEA 219 (376)
T ss_dssp TSCC-CCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTT
T ss_pred Ccch-hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccc
Confidence 2344 66667776 79999997 877 886655 677888899999999999999754332110000 0 1
Q ss_pred CCceEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 247 EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 247 ~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
.+.++++.|++|+++ |.+.|+++.++ ++.+.+..... ....+++.+..+++.++++.
T Consensus 220 ~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~ 278 (376)
T 3ezs_A 220 FKNVLVIHSLSKRSSAPGLRSGFIAGDS--------------RLLEKYKAFRA-YLGYTSANAIQKASEAAWLD 278 (376)
T ss_dssp CTTEEEEEESTTTTTCGGGCCEEEEECH--------------HHHHHHHHHHT-TTCCCCCHHHHHHHHHHHHC
T ss_pred cCcEEEEecchhccCCccceeEEEeeCH--------------HHHHHHHHHHh-hhcCCCChHHHHHHHHHHhC
Confidence 137899999999883 33339988866 44444433211 12346677777777777763
No 92
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.84 E-value=5.5e-21 Score=184.41 Aligned_cols=239 Identities=15% Similarity=0.083 Sum_probs=157.5
Q ss_pred cCceeeCCCC------CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC-----CCCCCCcee
Q 018231 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-----LDPEKWGVN 115 (359)
Q Consensus 47 ~~i~l~~~~~------~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g-----~~~~~~~~~ 115 (359)
+.|+|..+.. ++++.|++++.+.+......+|. ...+..+++ +.++++++ ++++ +
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr----~~la~~~~~~~~~~~~~----~ 120 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYA------PSIGFLSSR----EEIASYYHCPEAPLEAK----D 120 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCC------CTTCCHHHH----HHHHHHHCBTTBCCCGG----G
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCC------CCCCcHHHH----HHHHHHHhhcCCCCChH----H
Confidence 4588876553 57899999999987753222232 223445554 66666666 4554 4
Q ss_pred EEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh
Q 018231 116 VQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (359)
Q Consensus 116 v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (359)
|++|+|++ ++..++.++++|||+|+++.+.|.++. ..+...|.++..+++..+ +++.+|++++++.+++
T Consensus 121 v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~- 190 (427)
T 3dyd_A 121 VILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYK--------TLAESMGIEVKLYNLLPE-KSWEIDLKQLEYLIDE- 190 (427)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--------HHHHHTTCEEEEEEEEGG-GTTEECHHHHHSSCCT-
T ss_pred EEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHH--------HHHHHcCCEEEEEecccc-cCCCCCHHHHHHHhcc-
Confidence 99999999 888889999999999999996665432 234455766666664332 4678899999999987
Q ss_pred CCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccC----CCCCCCCCceEEEeCCCCcCCCC--
Q 018231 195 RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLRGP-- 263 (359)
Q Consensus 195 ~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~----~~~~~~~~~D~v~~s~~K~l~gp-- 263 (359)
++++++++ ++| +|...+ +++|+++|+++|+++|+|++|+....... ..........+++.|++|.|+.+
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~ 270 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGW 270 (427)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCc
Confidence 78888887 878 887777 99999999999999999999865332211 11111001237788999986433
Q ss_pred CceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 264 RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 264 ~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+.|+++++++.... .-++.+.+..... ...+++.+..+++.++|+.
T Consensus 271 riG~~~~~~~~~~~-------~~~i~~~l~~~~~--~~~~~~~~~~~a~~~~L~~ 316 (427)
T 3dyd_A 271 RLGWILIHDRRDIF-------GNEIRDGLVKLSQ--RILGPCTIVQGALKSILCR 316 (427)
T ss_dssp CCEEEEEECSTTSS-------HHHHHHHHHHHHH--HHCCSCHHHHHHHHHHHHH
T ss_pred ceEEEEecCcchhh-------HHHHHHHHHHHHh--ccCCCCHHHHHHHHHHHHh
Confidence 33999988631000 0022222221100 1246777888888888874
No 93
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.84 E-value=1.1e-20 Score=180.03 Aligned_cols=197 Identities=14% Similarity=0.140 Sum_probs=139.4
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~ 126 (359)
+.++|..+.+..++.+++++.+.+...+ +. .......+ +++.+++++|.+. .+++++|+.++.
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~---~~-----~~~~~~~~----l~~~la~~~~~~~-----~i~~~~gt~al~ 85 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTTW---IS-----SVGRFIVE----FEKAFADYCGVKH-----AIACNNGTTALH 85 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHTC---CS-----SCSHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcCC---cc-----CCChHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHH
Confidence 4567777777788999999998876532 11 11234444 4588888898863 344444544888
Q ss_pred HHHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 018231 127 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (359)
Q Consensus 127 ~~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n 205 (359)
.++.++ +++||+|+++.++|.++.. .+...|.+++.+ +.+++++.+|+++|++.+++ ++++|++ +|
T Consensus 86 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v~~--~n 152 (391)
T 3dr4_A 86 LALVAMGIGPGDEVIVPSLTYIASAN--------SVTYCGATPVLV--DNDPRTFNLDAAKLEALITP-RTKAIMP--VH 152 (391)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCSBCGGGSGGGCCT-TEEEECC--BC
T ss_pred HHHHHcCCCCcCEEEECCCchHHHHH--------HHHHCCCEEEEE--ecCccccCcCHHHHHHhcCC-CceEEEE--EC
Confidence 889998 9999999999988876643 233456556555 45545688999999999887 7887764 45
Q ss_pred -CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCceEEEEeCC
Q 018231 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (359)
Q Consensus 206 -~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (359)
+|...++++|.++|+++|+++|+|++|+.|....+.....+..+++.++|.||+++++.||+++++++
T Consensus 153 ~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~ 221 (391)
T 3dr4_A 153 LYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDD 221 (391)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred CCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCH
Confidence 89889999999999999999999999998877654322222224455555889998877788888764
No 94
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.7e-20 Score=184.38 Aligned_cols=235 Identities=17% Similarity=0.110 Sum_probs=163.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeEEECCChH-HHHHHHHhhcC-
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYTALLK- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~-~~~~~~~v~~tsG~~-a~~~~~~al~~- 134 (359)
.++.+.+++.+.+.... ..++ ..+.......++++.+++++++++|++ ... .+++++|++ ++.+++.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~---~~~~~~ggt~a~~~a~~a~~~~ 149 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYC-VANQ--LHPDVFPAVRKMESEVVSMVLRMFNAPSDTG---CGTTTSGGTESLLLACLSAKMY 149 (497)
T ss_dssp CCHHHHHHHHHHHHHTS-SCBT--TCTTTCHHHHHHHHHHHHHHHHHTTCCTTTC---CEEEESSHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHh-hcCC--CCcccChHHHHHHHHHHHHHHHHhCCCCCCC---eEEEcCcHHHHHHHHHHHHHHH
Confidence 34777777777665421 1111 112233556788888999999999997 222 489999988 88878887754
Q ss_pred ----CC---CeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-
Q 018231 135 ----PH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (359)
Q Consensus 135 ----~G---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n- 205 (359)
+| |+|+++.+.|.++.. .+...|.+++.++ .+++++.+|+++|++++++ ++++|+++ ++|
T Consensus 150 ~~~~~g~~~~~Vi~~~~~h~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~np 218 (497)
T 3mc6_A 150 ALHHRGITEPEIIAPVTAHAGFDK--------AAYYFGMKLRHVE--LDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFP 218 (497)
T ss_dssp HHHHSCCSSCEEEEETTSCHHHHH--------HHHHSCCEEEEEC--BCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTT
T ss_pred HHhcCCCCCceEEEeCCccHHHHH--------HHHHcCCeEEEEe--cCcccCcCCHHHHHHHHhh-CCEEEEEECCCCC
Confidence 56 899999976665432 4455677776665 4533688999999999987 89999888 776
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecccccccccc----C---CCCCC--CCCceEEEeCCCCcCCCCCc-eEEEEeCCcc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA----G---VIPSP--FEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~----~---~~~~~--~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (359)
+|.+.|+++|.++|+++|+++|+|++|+.+..++ + ..... ..++|++++++||++.+|.+ |+++++++.
T Consensus 219 tG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~- 297 (497)
T 3mc6_A 219 HGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSD- 297 (497)
T ss_dssp TCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHH-
T ss_pred CCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHH-
Confidence 8999999999999999999999999998655431 0 10111 12599999999999877777 999988741
Q ss_pred hhccCCcchhhhHHHh---hccc------cCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 276 EINKQGKEVFYDYEEK---INQA------VFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 276 ~~~~~g~~~~~~~~~~---~~~~------~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
+... +... ..+...|+.+...++++.++++.+..+
T Consensus 298 ------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~ 341 (497)
T 3mc6_A 298 ------------LRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGEN 341 (497)
T ss_dssp ------------HHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHH
T ss_pred ------------HHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHH
Confidence 1110 0000 011123566667788888888877654
No 95
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.84 E-value=1.9e-21 Score=182.72 Aligned_cols=241 Identities=12% Similarity=0.123 Sum_probs=157.6
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCC---chhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh-
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG---NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS- 122 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~- 122 (359)
..+++++++.++|+.|++++.+.+.+ + ..++...|.. .....++.+.+++++++++|++.++ +|++|+|+
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~---~v~~~~g~g 76 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKELLN-F--NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDY---QILFLQGGA 76 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSS-S--TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred ceEeecCCCcCCCHHHHHHHHHHhhh-h--ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEECCcc
Confidence 35788888889999999999998764 2 1111111111 1233445556889999999996322 59999998
Q ss_pred H-HHHHHHHhhcCC---CCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHH-HhhhhCCc
Q 018231 123 P-SNFQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRPK 197 (359)
Q Consensus 123 ~-a~~~~~~al~~~---Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~-~i~~~~~k 197 (359)
+ ++.+++.+++.+ ||.|+++.++|.+. . .+...| +++.++ .+++++.+|++++++ .+++ +||
T Consensus 77 t~al~~~~~~l~~~~~~g~~vi~~~~~~~~~--------~-~~~~~g-~~~~v~--~~~~~~~~d~~~l~~~~i~~-~~k 143 (360)
T 1w23_A 77 SLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL--------K-EAKLLG-ETHIAA--STKANSYQSIPDFSEFQLNE-NDA 143 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHHH--------H-HHHTTS-EEEEEE--ECGGGTSCSCCCGGGCCCCT-TEE
T ss_pred hHHHHHHHHHhcCCCCcccEEEecchhHHHH--------H-HHHHhC-CeEEee--cccccCcCCccchHhhccCC-CCC
Confidence 7 888788888765 56677655333321 0 123346 666665 442244578999988 7876 899
Q ss_pred EEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCc
Q 018231 198 LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (359)
Q Consensus 198 ~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (359)
+|+++ ++| +|.+.+ +++++||+++|+|++|+.+..+.++. ..|++++|+||+++ |.| |+++++++.
T Consensus 144 ~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~~~-----~~di~~~s~sK~~~-~~G~G~~~~~~~~ 212 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLKVN-----QFGMIYAGAQKNLG-PSGVTVVIVKKDL 212 (360)
T ss_dssp EEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCCGG-----GCSEEEEETTTTTS-CTTCEEEEEEHHH
T ss_pred EEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcCcc-----cCCEEEEEcccccC-CCCcEEEEEcHHH
Confidence 99888 677 887765 33448999999999999887654332 24899999999884 767 999998753
Q ss_pred chhcc--CCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 275 KEINK--QGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 275 ~~~~~--~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
...+. .++.. +..... . .....++++...++++.++++.+.++
T Consensus 213 ~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~~~~~al~~~~~~ 257 (360)
T 1w23_A 213 LNTKVEQVPTML--QYATHI-K--SDSLYNTPPTFSIYMLRNVLDWIKDL 257 (360)
T ss_dssp HCSCCTTCCGGG--CHHHHH-H--TTTCSSCCCHHHHHHHHHHHHHHHHT
T ss_pred HhhcccCCcchh--hhhhhh-h--ccCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 21110 01110 111000 0 11234789999999999999877643
No 96
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.84 E-value=1.2e-20 Score=179.27 Aligned_cols=216 Identities=8% Similarity=0.027 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeee--e
Q 018231 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI--F 167 (359)
Q Consensus 91 ~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~--~ 167 (359)
.++.+.+++++++++|++. .|++++|++ ++.+++ .++++||+|++++..|.+.. +.. .+...|. +
T Consensus 34 ~~~~~~~~~~l~~~~~~~~-----~v~~~~sgt~a~~~~~-~~~~~gd~vi~~~~~~~~~~--~~~----~~~~~g~~~~ 101 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAEA-----AVIIPGSGTYGMEAVA-RQLTIDEDCLIIRNGWFSYR--WTQ----ILEKGKFAKS 101 (379)
T ss_dssp HHHHHHHHHHHHHHHTCSE-----EEEEESCHHHHHHHHH-HHHCTTCEEEEEECSHHHHH--HHH----HHHHHCCSSE
T ss_pred HHHHHHHHHHHHHHhCCCC-----EEEEcCChhHHHHHHH-HhCCCCCeEEEEeCCchhHH--HHH----HHHHhCCCCc
Confidence 3555568899999999872 488887777 777555 45689999999886554421 110 1112232 3
Q ss_pred eEEEecccCC-----CC-CCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccc
Q 018231 168 FETMPYRLNE-----ST-GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGL 236 (359)
Q Consensus 168 ~~~v~~~~~~-----~~-~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~ 236 (359)
+..++.+... .. ..+|++++++.+++.++++|+++ .+| +|.+.| +++|.++|++||+++|+|++|+ |.
T Consensus 102 ~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~ 180 (379)
T 3ke3_A 102 STVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GC 180 (379)
T ss_dssp EEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TT
T ss_pred eEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CC
Confidence 4444432210 01 25899999999964489998876 444 788878 9999999999999999999998 76
Q ss_pred cccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhccC-Ccchh-hhH---HHhhccccCCC--CCCCCcHHH
Q 018231 237 VAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ-GKEVF-YDY---EEKINQAVFPG--LQGGPHNHT 308 (359)
Q Consensus 237 ~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~-g~~~~-~~~---~~~~~~~~~~~--~~gt~~~~~ 308 (359)
.+.+....+ +|++++|+||+|+||.| |++++++++...+.. ....+ +++ .+......... ..+|+++..
T Consensus 181 ~~~~~~~~~---~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~ 257 (379)
T 3ke3_A 181 VWLDMKELG---IDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDS 257 (379)
T ss_dssp CCCCHHHHT---CSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHH
T ss_pred ccccccccC---CCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHH
Confidence 665544444 89999999999999988 999998854221111 10100 111 11000000111 126999999
Q ss_pred HHHHHHHHHHHhcc
Q 018231 309 ITGLAVALKQVCTL 322 (359)
Q Consensus 309 i~al~~Al~~~~~~ 322 (359)
++|+.+|++++.++
T Consensus 258 ~~a~~aal~~~~~~ 271 (379)
T 3ke3_A 258 LRQFRDAILEAKEI 271 (379)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 97
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.84 E-value=1.1e-20 Score=181.93 Aligned_cols=206 Identities=15% Similarity=0.115 Sum_probs=138.4
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhc-cCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEE---ECCCh
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTN-KYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQ---SLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~-~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~---~tsG~ 122 (359)
..++..+..|. +.|++++.+.... ....+ .....|+. ...++ +++.+++++|++. .++ ++||+
T Consensus 35 ~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~-~~gy~y~~-~~~~~----Le~~lA~l~g~e~-----alv~p~~~sGt 101 (427)
T 3i16_A 35 KILDDIREFNQ--LKVLNAFQEERISEAHFTN-SSGYGYGD-IGRDS----LDAVYARVFNTES-----ALVRPHFVNGT 101 (427)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHTTCCGGGSCC-CCTTCTTC-HHHHH----HHHHHHHHHTCSE-----EEEETTCCSHH
T ss_pred HHHHHHHHhCH--HHHHHHHHHhchhHHhcCC-CCCCCCCH-HHHHH----HHHHHHHHhCCcc-----eEEeCCCccHH
Confidence 34444444443 6788888875321 11111 11111222 23444 4488999999875 366 56665
Q ss_pred HHHHHHHHhhcCCCCeeeecC-CCCCcccCcc-ccc-c-ccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhh--hhCC
Q 018231 123 PSNFQVYTALLKPHDRIMALD-LPHGGHLSHG-YQT-D-TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT--LFRP 196 (359)
Q Consensus 123 ~a~~~~~~al~~~Gd~Vl~~~-~~~~~~~~~~-~~~-~-~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~--~~~~ 196 (359)
.++..++.++++|||+|++.+ +.|+++.... ... . .......|.+++.+ +.+ +++.+|+++++++++ + +|
T Consensus 102 ~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v--~~~-~~g~~D~e~l~~~l~~~~-~t 177 (427)
T 3i16_A 102 HALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQV--DLK-EDGKPNLEEIEKVLKEDE-SI 177 (427)
T ss_dssp HHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEEC--CCC-TTSSCCHHHHHHHHHTCT-TE
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEe--cCc-cCCCcCHHHHHHHhhCCC-CC
Confidence 588889999999999999998 7776553111 000 0 01122345555444 454 457899999999998 5 89
Q ss_pred cEEEEcC-----CC-CCChhhHHHHHHHHHH--cCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCC---CCc
Q 018231 197 KLIVAGA-----SA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRG 265 (359)
Q Consensus 197 k~v~l~~-----~n-~g~~~~l~~i~~la~~--~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~g---p~g 265 (359)
|+|+++. +| +|.+.|+++|+++|++ +|+++++|++|+.+......... ++|++++|+||+++| +.|
T Consensus 178 klV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~---gaDiv~~S~sK~lgg~g~~~g 254 (427)
T 3i16_A 178 TLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDV---GADLIAGSLIKNIGGGIAPTG 254 (427)
T ss_dssp EEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGG---TCSEEEEETTSGGGTTTCCSC
T ss_pred EEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCcccc---CCeEEEecCcccCCCCCCceE
Confidence 9998864 45 7789999999999999 99999999999866532211112 489999999999987 778
Q ss_pred eEEEEeC
Q 018231 266 AMIFFRK 272 (359)
Q Consensus 266 G~l~~~~ 272 (359)
|++++++
T Consensus 255 G~i~~~~ 261 (427)
T 3i16_A 255 GYLAGTK 261 (427)
T ss_dssp EEEEECH
T ss_pred EEEEECH
Confidence 9999987
No 98
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.84 E-value=6.5e-20 Score=173.29 Aligned_cols=232 Identities=14% Similarity=0.123 Sum_probs=158.4
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeEEECCC
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~~~v~~tsG 121 (359)
++.|+|..++++ +++.+++++.+.+.+.. .+|+. .. .++++.+.+++.+.+|. +++ +|++|+|
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-------~~-~~lr~~la~~~~~~~~~~~~~~----~i~~t~g 89 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGYQP-------DG-SLLSQATAEFYADRYGYQARPE----WIFPIPD 89 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSSCC-------SS-CCHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCCCC-------CC-HHHHHHHHHHHHHHhCCCCCHH----HEEEeCC
Confidence 357899887764 68999999999887521 12222 22 34555566777777774 443 5999999
Q ss_pred hH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 018231 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (359)
Q Consensus 122 ~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~ 200 (359)
++ ++..++.+++++||+|++..+.|.++.. .+...|.++..++ .+ ++ +|+++|++.+++ ++++++
T Consensus 90 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~--~d~~~l~~~l~~-~~~~v~ 155 (377)
T 3fdb_A 90 VVRGLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQREGIFID--AT-GG--INLHDVEKGFQA-GARSIL 155 (377)
T ss_dssp HHHHHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTCCEEEEE--CT-TS--CCHHHHHHHHHT-TCCEEE
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEEcc--CC-CC--CCHHHHHHHhcc-CCCEEE
Confidence 99 8888899999999999999977765432 3445566665564 44 22 899999999988 789988
Q ss_pred Ec-CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCC-----CceEEEeCCCCcCC--CCCceEE
Q 018231 201 AG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSLR--GPRGAMI 268 (359)
Q Consensus 201 l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~-----~~D~v~~s~~K~l~--gp~gG~l 268 (359)
++ ++| +|... ++++|.++|++||+++|+|++|+...........++. +.++++.|++|+++ |.+.|++
T Consensus 156 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 235 (377)
T 3fdb_A 156 LCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQI 235 (377)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEE
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEE
Confidence 87 777 88655 5777888899999999999999764332201111111 24589999999883 3333888
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.++ ++.+.+... .....++++.+..+++.++++.
T Consensus 236 ~~~~~-------------~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~ 271 (377)
T 3fdb_A 236 IFSNP-------------SDAEHWQQL-SPVIKDGASTLGLIAAEAAYRY 271 (377)
T ss_dssp ECCSH-------------HHHHHHHHS-CHHHHCCCCHHHHHHHHHHHHH
T ss_pred EeCCH-------------HHHHHHHHH-HHhhcCCCCHHHHHHHHHHHhc
Confidence 87543 444444332 1111256777887887777765
No 99
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.83 E-value=1.1e-20 Score=181.15 Aligned_cols=196 Identities=15% Similarity=0.156 Sum_probs=132.2
Q ss_pred HHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEE---ECCChHHHHHHHHhhcCCC
Q 018231 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPH 136 (359)
Q Consensus 60 ~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~---~tsG~~a~~~~~~al~~~G 136 (359)
..|+++|.+........+......|+. ...++ +++.+++++|++. .++ ++||+.++..++.++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~----Le~~lA~l~g~e~-----alv~p~~~sGt~Ai~~al~all~~G 101 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDT----LERVYATVFKTEA-----ALVRPQIISGTHAISTVLFGILRPD 101 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHH----HHHHHHHHHTCSE-----EEEETTSCSHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHH----HHHHHHHHhCCCc-----EEEECCCccHHHHHHHHHHHhcCCC
Confidence 678888887643211001111112232 22343 4578999999875 355 4555558888999999999
Q ss_pred CeeeecC-CCCCcccCccc-c-ccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC-----CC-CC
Q 018231 137 DRIMALD-LPHGGHLSHGY-Q-TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA-----SA-YA 207 (359)
Q Consensus 137 d~Vl~~~-~~~~~~~~~~~-~-~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~-----~n-~g 207 (359)
|+|++.+ +.|.+.....- . .........|.+++.+ +.+ +++.+|++++++++++ +||+|+++. +| +|
T Consensus 102 D~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v--~~~-~~g~~d~e~l~~ai~~-~tklV~i~~s~g~p~nptg 177 (409)
T 3jzl_A 102 DELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV--PLL-ENGDVDFPRIAKKMTP-KTKMIGIQRSRGYADRPSF 177 (409)
T ss_dssp CEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC--CCC-TTSCCCHHHHHHHCCT-TEEEEEEECSCTTSSSCCC
T ss_pred CEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe--CCC-CCCCcCHHHHHHhccC-CCeEEEEECCCCCCCCCcC
Confidence 9999987 66665431100 0 0001222345555444 455 4678999999999987 899998863 45 78
Q ss_pred ChhhHHHHHHHHHH--cCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCC---CCceEEEEeC
Q 018231 208 RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRK 272 (359)
Q Consensus 208 ~~~~l~~i~~la~~--~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~g---p~gG~l~~~~ 272 (359)
.+.|+++|.++|++ +|+++++|++|+.+......... ++|++++|+||+++| +.||+++.++
T Consensus 178 ~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~---g~Div~~S~sK~lgg~~~~~GG~v~~~~ 244 (409)
T 3jzl_A 178 TIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEV---GADIIAGSLIKNPGGGLAKTGGYIAGKE 244 (409)
T ss_dssp CHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGG---TCSEEEEETTSGGGTTTCSSCEEEEECH
T ss_pred ccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCcccc---CCeEEEECccccCCccCCceEEEEEeCH
Confidence 99999999999999 99999999998766532221122 489999999999976 4579999886
No 100
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.83 E-value=1.2e-19 Score=173.20 Aligned_cols=186 Identities=15% Similarity=0.222 Sum_probs=138.1
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhh-cC
Q 018231 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK 134 (359)
Q Consensus 57 ~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al-~~ 134 (359)
.+++++++++.+.+.+.| ... .+ ....+ +++.+++++|.+ ++++++|++ ++..++.++ ++
T Consensus 9 ~~~~~v~~a~~~~~~~~~----~~~---~g-~~~~~----l~~~la~~~~~~------~v~~~~ggt~al~~~~~~l~~~ 70 (394)
T 1o69_A 9 HMGGNELKYIEEVFKSNY----IAP---LG-EFVNR----FEQSVKDYSKSE------NALALNSATAALHLALRVAGVK 70 (394)
T ss_dssp ---CCHHHHHHHHHHHTT----TSC---TT-HHHHH----HHHHHHHHHCCS------EEEEESCHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHcCC----ccC---CC-hHHHH----HHHHHHHHhCCC------cEEEeCCHHHHHHHHHHHcCCC
Confidence 456788889888876533 110 01 22333 558888888874 388999888 888899998 99
Q ss_pred CCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEcCCCCCChhhH
Q 018231 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYARLYDY 212 (359)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~~k~v~l~~~n~g~~~~l 212 (359)
+||+|+++.++|+++.. .+...|.+++.++ .+ +++.+|+++|++.+++. ++++|++++ .+|...++
T Consensus 71 ~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l 138 (394)
T 1o69_A 71 QDDIVLASSFTFIASVA--------PICYLKAKPVFID--CD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKM 138 (394)
T ss_dssp TTCEEEEESSSCGGGTH--------HHHHTTCEEEEEC--BC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCH
T ss_pred CCCEEEECCCccHHHHH--------HHHHcCCEEEEEE--eC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhH
Confidence 99999999988877644 2334566565554 55 56889999999999763 589988874 47888999
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCceEEEEeC
Q 018231 213 ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 213 ~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (359)
++|.++|+++|+++|+|++|+.|..+.+.....+.++|+.++|.+|.++++.+|++++++
T Consensus 139 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~ 198 (394)
T 1o69_A 139 DEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKN 198 (394)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESC
T ss_pred HHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECC
Confidence 999999999999999999998777654432212235899999999988776669999964
No 101
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.83 E-value=7.4e-20 Score=171.39 Aligned_cols=201 Identities=17% Similarity=0.208 Sum_probs=144.8
Q ss_pred cCceeeCCCC-CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-H
Q 018231 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (359)
Q Consensus 47 ~~i~l~~~~~-~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a 124 (359)
..+.|..+.+ ++++.+++++.+.+.+ |..+ .+..++++.+++++++++|++++ +|++|+|++ +
T Consensus 14 ~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~~----------~g~~~~~~~~~~~l~~~~g~~~~----~v~~~~g~t~a 78 (359)
T 1svv_A 14 KPYSFVNDYSVGMHPKILDLMARDNMT-QHAG----------YGQDSHCAKAARLIGELLERPDA----DVHFISGGTQT 78 (359)
T ss_dssp -CEECSCSCSSCCCHHHHHHHHHHTTC-CCCS----------TTCSHHHHHHHHHHHHHHTCTTS----EEEEESCHHHH
T ss_pred eeEEecCCCcCCCCHHHHHHHHHHHhh-cccc----------ccccHHHHHHHHHHHHHhCCCCc----cEEEeCCchHH
Confidence 4677865443 5789999999988764 3111 11234455577999999998764 499999999 8
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh------CCcE
Q 018231 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKL 198 (359)
Q Consensus 125 ~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~------~~k~ 198 (359)
+..++.+++++||+|+++++.|+++.... .+...|.+++.++ .+ ++.+|+++|++.+++. ++++
T Consensus 79 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~------~~~~~g~~~~~v~--~~--~~~~d~~~l~~~l~~~~~~~~~~~~~ 148 (359)
T 1svv_A 79 NLIACSLALRPWEAVIATQLGHISTHETG------AIEATGHKVVTAP--CP--DGKLRVADIESALHENRSEHMVIPKL 148 (359)
T ss_dssp HHHHHHHHCCTTEEEEEETTSHHHHSSTT------HHHHTTCCEEEEC--CT--TSCCCHHHHHHHHHHSCSTTSCEEEE
T ss_pred HHHHHHHHhCCCCEEEEcccchHHHHHHH------HHhcCCCeeEEEe--CC--CCeecHHHHHHHHHHHHhccCCCceE
Confidence 88899999999999999998777664431 1234465565554 33 5789999999999873 2889
Q ss_pred EEEcCCC-CCChhh---HHHHHHHHHHcCCEEEEeccc---cccccccCCCCCCC-CCceEEEeCCCCcCCCCCc-eEEE
Q 018231 199 IVAGASA-YARLYD---YERIRKVCNKQKAIMLADMAH---ISGLVAAGVIPSPF-EYADVVTTTTHKSLRGPRG-AMIF 269 (359)
Q Consensus 199 v~l~~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~---~~g~~~~~~~~~~~-~~~D~v~~s~~K~l~gp~g-G~l~ 269 (359)
|+++++| +|...| +++|.++|++||+++|+|++| +.|..+.+.....+ ...|+++++++|+ ++|.| |+++
T Consensus 149 v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~ 227 (359)
T 1svv_A 149 VYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALII 227 (359)
T ss_dssp EEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEE
T ss_pred EEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEE
Confidence 8888335 887766 889999999999999999998 44544332111000 1379999999996 67777 8888
Q ss_pred EeCC
Q 018231 270 FRKG 273 (359)
Q Consensus 270 ~~~~ 273 (359)
++++
T Consensus 228 ~~~~ 231 (359)
T 1svv_A 228 LNDA 231 (359)
T ss_dssp CSGG
T ss_pred Eccc
Confidence 8774
No 102
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.82 E-value=5.5e-20 Score=178.63 Aligned_cols=234 Identities=11% Similarity=0.021 Sum_probs=158.7
Q ss_pred CCcchhccccccccChHHHHHHHHHHHHhhcCceeeCCCC----CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHH
Q 018231 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 92 (359)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~ 92 (359)
..|...++++.+...+..+..+.+.. ...+.|+|..+.. ++++.+.+++.+.+.+... ....|+...+..+
T Consensus 48 ~~~~~~~s~~~~~~~~s~~~~~~~~~-~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~----~~~~Y~~~~g~~~ 122 (448)
T 3aow_A 48 GDVERFFSKKALEMRASEVRELLKLV-ETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYAD----KALQYGTTKGFTP 122 (448)
T ss_dssp SCGGGGCCHHHHHCCCCHHHHHHHHH-HTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHH----HHHSCCCTTCCHH
T ss_pred cchHHHhhHHHhcCCCcHHHHHHHhc-cCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhH----HHhCCCCCCCcHH
Confidence 44777777777777777666655532 3456788976543 2577888888887754100 0011232344567
Q ss_pred HHHHHHHHHHHHcCC-CCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEE
Q 018231 93 AESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (359)
Q Consensus 93 l~~~~~~~~a~~~g~-~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (359)
+++++.+++.+.+|+ +++ +|++|+|++ ++..++.+++++||+|++..+.|.+... .+...|.++..
T Consensus 123 lr~~ia~~~~~~~g~~~~~----~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~ 190 (448)
T 3aow_A 123 LRETLMKWLGKRYGISQDN----DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEPQYIQ 190 (448)
T ss_dssp HHHHHHHHHHHHHCCCTTS----EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCCEEEE
T ss_pred HHHHHHHHHHHhcCcCChh----hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEE
Confidence 777777777666798 443 599999999 8888999999999999999966654432 34445666655
Q ss_pred EecccCCCCCCCCHHHHHHHhh----h-hCCcEEE-Ec-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc
Q 018231 171 MPYRLNESTGYIDYDQLEKSAT----L-FRPKLIV-AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA 239 (359)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~----~-~~~k~v~-l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~ 239 (359)
++ .+ ++ .+|+++|++.++ + .++++|+ ++ ++| +|...+ +++|.++|++||+++|+|++|+......
T Consensus 191 v~--~~-~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g 266 (448)
T 3aow_A 191 IP--LD-DE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG 266 (448)
T ss_dssp EE--EE-TT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS
T ss_pred ec--cC-CC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC
Confidence 55 44 22 389999999987 3 2688875 44 677 886554 6789999999999999999997654321
Q ss_pred C----CCCCCCCCceEEEeCCCCcCCCCC--ceEEEEeC
Q 018231 240 G----VIPSPFEYADVVTTTTHKSLRGPR--GAMIFFRK 272 (359)
Q Consensus 240 ~----~~~~~~~~~D~v~~s~~K~l~gp~--gG~l~~~~ 272 (359)
. +......+.++++.|++|+|+ |. .|++++++
T Consensus 267 ~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~ 304 (448)
T 3aow_A 267 NPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP 304 (448)
T ss_dssp CCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH
T ss_pred CCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH
Confidence 1 111111136789999999986 32 39999987
No 103
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.82 E-value=6.9e-21 Score=179.94 Aligned_cols=191 Identities=17% Similarity=0.164 Sum_probs=137.1
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
+++..+.+++++++.+++.+.+...+ + .......+ +++.+++++|.+. +++++|++ ++..
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~--------~-~~~~~~~~----l~~~la~~~~~~~------~~~~~sGt~al~~ 65 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQ--------Y-ILGPEVTE----LEDRLADFVGAKY------CISCANGTDALQI 65 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCC--------C-SSCHHHHH----HHHHHHHHHTCSE------EEEESCHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHHhcCC--------c-cCChHHHH----HHHHHHHHhCCCc------EEEeCCHHHHHHH
Confidence 34444444567888888888776532 1 11233444 4588888999863 55555555 8888
Q ss_pred HHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC-
Q 018231 128 VYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA- 205 (359)
Q Consensus 128 ~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n- 205 (359)
++.++ +++||+|+++.++|.++.. .+...|.+++.+ +.+++++.+|++++++.+++ ++++|+ ++|
T Consensus 66 al~~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~~~ 132 (367)
T 3nyt_A 66 VQMALGVGPGDEVITPGFTYVATAE--------TVALLGAKPVYV--DIDPRTYNLDPQLLEAAITP-RTKAII--PVSL 132 (367)
T ss_dssp HHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCSBCGGGTGGGCCT-TEEEEC--CBCG
T ss_pred HHHHhCCCCcCEEEECCCccHHHHH--------HHHHcCCEEEEE--ecCCccCCcCHHHHHHhcCc-CCcEEE--eeCC
Confidence 88988 8999999999987776543 233456555545 45645688999999999977 788777 455
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeC--CCCcCCC-CCceEEEEeCC
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRKG 273 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s--~~K~l~g-p~gG~l~~~~~ 273 (359)
+|...++++|.++|+++|+++|+|++|+.|....+. ..+.. .|++++| ++|++++ +.||+++++++
T Consensus 133 ~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~-~~~~~-~di~~~Sf~~~K~l~~~g~gg~~~~~~~ 201 (367)
T 3nyt_A 133 YGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGK-RSCNL-STVACTSFFPSAPLGCYGDGGAIFTNDD 201 (367)
T ss_dssp GGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE-ETTSS-SSEEEEECCTTSSSCCSSCCEEEEESCH
T ss_pred ccChhhHHHHHHHHHHcCCEEEEECccccCCeECCe-eccCC-CCEEEEECCCCCcCCCcCceeEEEeCCH
Confidence 898999999999999999999999999987763322 11211 2888888 5899976 45688888664
No 104
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.82 E-value=6.6e-20 Score=173.02 Aligned_cols=184 Identities=17% Similarity=0.162 Sum_probs=133.9
Q ss_pred CCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhh
Q 018231 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (359)
Q Consensus 54 ~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al 132 (359)
+.+++++.+++++.+.+.+.+ .+ ++ ....+ +++.+++++|++ ++++++|++ ++..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~------~~-~~~~~----l~~~la~~~~~~------~v~~~~ggt~al~~~~~~~ 67 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LT------QG-KRSLL----FEEALCEFLGVK------HALVFNSATSALLTLYRNF 67 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CS------SS-HHHHH----HHHHHHHHHTCS------EEEEESCHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--cc------CC-hHHHH----HHHHHHHHhCCC------eEEEeCCHHHHHHHHHHHh
Confidence 456789999999999886532 11 11 22333 558889999986 288888888 888899999
Q ss_pred ---cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCCh
Q 018231 133 ---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 209 (359)
Q Consensus 133 ---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~ 209 (359)
+++||+|++++++|+++... +...|.+++.+ +.+ +++.+|+++|++.+++ ++++|+++.+ +|..
T Consensus 68 ~~~~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~~--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~ 134 (375)
T 2fnu_A 68 SEFSADRNEIITTPISFVATANM--------LLESGYTPVFA--GIK-NDGNIDELALEKLINE-RTKAIVSVDY-AGKS 134 (375)
T ss_dssp SCCCTTSCEEEECSSSCTHHHHH--------HHHTTCEEEEC--CBC-TTSSBCGGGSGGGCCT-TEEEEEEECG-GGCC
T ss_pred cccCCCCCEEEECCCccHhHHHH--------HHHCCCEEEEe--ccC-CCCCCCHHHHHhhcCc-CceEEEEeCC-cCCc
Confidence 89999999999888766442 23346555444 455 3347899999999887 7888777644 8988
Q ss_pred hhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEe
Q 018231 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFR 271 (359)
Q Consensus 210 ~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~ 271 (359)
.|+++|.++|+++|+++|+|++|+.|..+.+.....+..+++.++|+||++ ++ | |++++.
T Consensus 135 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~ 195 (375)
T 2fnu_A 135 VEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI-TT-AEGGAVVT 195 (375)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS-CC-SSCEEEEE
T ss_pred cCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCc-cc-cCceEEEe
Confidence 999999999999999999999999887653311111112556677777988 55 5 777764
No 105
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.82 E-value=5.9e-21 Score=185.89 Aligned_cols=169 Identities=13% Similarity=0.106 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH--HHHHHHHhhcC--CCCeeeecCCCCCcccCccccccccceeeee
Q 018231 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (359)
Q Consensus 90 ~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~--a~~~~~~al~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (359)
..++++.+++++++++|+++ . +++|+|++ ++..++.++.. +||.|++++++|+++.. .+...|
T Consensus 131 ~~~~~~~~~~~la~~~g~~~----~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~--------~~~~~G 197 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLNV----H-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIK--------AVSFVG 197 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCC----E-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH--------HHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCC----C-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHH--------HHHHcC
Confidence 56677789999999999976 2 88888877 45445555433 77889988877776422 334457
Q ss_pred eeeEEEeccc-CCCCCCCCHHHHHHHh-hh---hCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEecccc---cc
Q 018231 166 IFFETMPYRL-NESTGYIDYDQLEKSA-TL---FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHI---SG 235 (359)
Q Consensus 166 ~~~~~v~~~~-~~~~~~~d~e~l~~~i-~~---~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~---~g 235 (359)
.+++.+++.. + +++.+|+++|++++ ++ .++.+|+++ ++| +|.+.|+++|.++|+++|+++++|+||+ .|
T Consensus 198 ~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g 276 (456)
T 2z67_A 198 MNMRLVETVLDG-DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNY 276 (456)
T ss_dssp CEEEEECCEEET-TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHH
T ss_pred CCceEEEEeccC-CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHH
Confidence 6666665321 3 56789999999999 42 367777666 656 8999999999999999999999998765 33
Q ss_pred ccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 236 LVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 236 ~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
..+.+...... ++|++++|+||++++|.| |+++++++
T Consensus 277 ~~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~~ 314 (456)
T 2z67_A 277 YLEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTDA 314 (456)
T ss_dssp HHHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred hhHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcCH
Confidence 43433221110 389999999999888887 99999653
No 106
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.82 E-value=3.5e-19 Score=168.92 Aligned_cols=217 Identities=17% Similarity=0.190 Sum_probs=149.4
Q ss_pred cCceeeCC--CCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-
Q 018231 47 KGLELIPS--ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (359)
Q Consensus 47 ~~i~l~~~--~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~- 123 (359)
..+++..+ +.++++.+++++. .+ + ++ ..+++.+++.+++++|+++.+ .+++++|++
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~-----~~--~--------~~---~~~~~~~~~~~a~~~g~~~~~---~~~~~~ggt~ 87 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLN-----TY--I--------GS---SYFAEKVNEYGLKHLGGDEND---KCVGFNRTSS 87 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHT-----ST--T--------HH---HHHHHHHHHHHHHHHTCCTTE---EEEEESSHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHH-----Hh--c--------Cc---hHHHHHHHHHHHHHhCCCCcc---eEEEEcChHH
Confidence 35676653 5578999999986 12 1 00 233345667788899984222 477778878
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcE-EEEc
Q 018231 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL-IVAG 202 (359)
Q Consensus 124 a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~-v~l~ 202 (359)
++..++.++ |||+|+++++.|+++++... .+...|.+++.+ .|++++++. ++ ++++ |+++
T Consensus 88 a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-----~~~~~g~~~~~v----------~d~~~l~~~-~~-~~~~~v~~~ 148 (374)
T 2aeu_A 88 AILATILAL--KPKKVIHYLPELPGHPSIER-----SCKIVNAKYFES----------DKVGEILNK-ID-KDTLVIITG 148 (374)
T ss_dssp HHHHHHHHH--CCSEEEEECSSSSCCTHHHH-----HHHHTTCEEEEE----------SCHHHHHTT-CC-TTEEEEEEC
T ss_pred HHHHHHHhC--CCCEEEEecCCCCccHHHHH-----HHHHcCcEEEEe----------CCHHHHHhc-CC-CccEEEEEc
Confidence 888788877 99999999988877654221 223345444333 288999887 65 8999 8887
Q ss_pred -CCC-CC-ChhhHHHHHHHHHHcCCEEEEecccccccc-ccCCCCCCCC-CceEEEeCCCCcCCCCCceEEEEeCCcchh
Q 018231 203 -ASA-YA-RLYDYERIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (359)
Q Consensus 203 -~~n-~g-~~~~l~~i~~la~~~~~~vivD~a~~~g~~-~~~~~~~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (359)
++| +| ...++++|.++|++||+++|+|++|+.+.. +.. ...+.. +.|++++|+||+++|+++|++++++
T Consensus 149 ~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~----- 222 (374)
T 2aeu_A 149 STMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFN-QPPALKLGADLVVTSTDKLMEGPRGGLLAGKK----- 222 (374)
T ss_dssp BCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTT-CCCHHHHTCSEEEEETTSSSSSCSCEEEEEEH-----
T ss_pred cCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccc-cCCccccCCcEEEecCcccccCcceEEEEECH-----
Confidence 777 77 889999999999999999999999876642 111 110111 4799999999999888889999987
Q ss_pred ccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018231 278 NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 278 ~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
++.+.+..... ...++++....+++.++++.+
T Consensus 223 ---------~~~~~l~~~~~-~~~~~~~~~~~~a~~~al~~~ 254 (374)
T 2aeu_A 223 ---------ELVDKIYIEGT-KFGLEAQPPLLAGIYRALKNF 254 (374)
T ss_dssp ---------HHHHHHHHHHH-TTTCBCCHHHHHHHHHHHHHC
T ss_pred ---------HHHHHHHHhhc-cccCCCCHHHHHHHHHHHHHH
Confidence 44444332211 112356777778888888765
No 107
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.82 E-value=4.1e-19 Score=174.85 Aligned_cols=241 Identities=11% Similarity=0.044 Sum_probs=157.8
Q ss_pred hhcCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeEEECCCh
Q 018231 45 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (359)
Q Consensus 45 ~~~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~~~v~~tsG~ 122 (359)
..+.+++..+....|+.+++++.+.+.... + .....|+...+..++++++.+++.+.+|. +++ +|++|+|+
T Consensus 94 ~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~ 166 (500)
T 3tcm_A 94 HPDLLQREEIKTLFSADSISRAKQILAMIP--G-RATGAYSHSQGIHGLRDAIASGIASRDGFPANAD----DIFLTDGA 166 (500)
T ss_dssp SGGGGGCTTHHHHSCHHHHHHHHHHHTTST--T-SCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGG----GEEEESSS
T ss_pred CcccccCCCCcccCCHHHHHHHHHHHHcCC--C-CcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcc----cEEEcCCH
Confidence 344566654433467777777777665421 1 01123444466677888888888887775 443 59999999
Q ss_pred H-HHHHHHHhhc-CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh-----C
Q 018231 123 P-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----R 195 (359)
Q Consensus 123 ~-a~~~~~~al~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~ 195 (359)
+ ++..++.+++ ++||+|++++++|+++. ..+...|.+++.++++.+ .++.+|+++|++.+++. +
T Consensus 167 ~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~ 237 (500)
T 3tcm_A 167 SPGVHLMMQLLIRNEKDGILVPIPQYPLYS--------ASIALHGGALVPYYLNES-TGWGLETSDVKKQLEDARSRGIN 237 (500)
T ss_dssp HHHHHHHHHHHCCSTTEEEEEEESCCTHHH--------HHHHHTTCEEEEEECBTT-TTSBCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCCCEEEEeCCCcHhHH--------HHHHHcCCEEEEEecccc-cCCCCCHHHHHHHHHHHHhcCCC
Confidence 9 8887888887 89999999996665443 244556766655654322 35799999999999763 5
Q ss_pred CcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccccCCCCCC-------C----CCc-eEEEeCCCC
Q 018231 196 PKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-------F----EYA-DVVTTTTHK 258 (359)
Q Consensus 196 ~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~-------~----~~~-D~v~~s~~K 258 (359)
+++|+++ ++| ||.+. ++++|+++|+++|+++|+|++|.......+....+ + ... .+++.|++|
T Consensus 238 ~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK 317 (500)
T 3tcm_A 238 VRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSK 317 (500)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSS
T ss_pred ceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCc
Confidence 7888877 888 88654 46778888999999999999987644422111111 0 011 367789999
Q ss_pred cCC---CCCceEEEE---eCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 259 SLR---GPRGAMIFF---RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 259 ~l~---gp~gG~l~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
+|. |.++|++++ ++ ++.+.+.... ....+++.++.+++..+++
T Consensus 318 ~~~g~~G~R~G~~~~~~~~~--------------~~~~~l~~~~--~~~~~~~~~~q~~~~~~l~ 366 (500)
T 3tcm_A 318 GYYGECGKRGGYFEITGFSA--------------PVREQIYKIA--SVNLCSNITGQILASLVMN 366 (500)
T ss_dssp TTTCCGGGCCEEEEEESCCT--------------THHHHHHHHH--HTTCCCCHHHHHHHHHHHS
T ss_pred cCCCCCccceEEEEEeCCCH--------------HHHHHHHHHH--hcccCCCHHHHHHHHHHhc
Confidence 984 555599987 44 3343333221 1234567777777776664
No 108
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.82 E-value=6.8e-20 Score=175.76 Aligned_cols=240 Identities=16% Similarity=0.133 Sum_probs=156.3
Q ss_pred cCceeeCCC------CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHH------cC--CCCCCC
Q 018231 47 KGLELIPSE------NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA------FR--LDPEKW 112 (359)
Q Consensus 47 ~~i~l~~~~------~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~------~g--~~~~~~ 112 (359)
+.|+|..+. .++++.+++++.+.+......+| +......++++++.+++.+. .| ++++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~-- 105 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGY------FPTVGSPEAREAVATWWRNSFVHKEELKSTIVKD-- 105 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSC------CCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG--
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCc------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcc--
Confidence 468887654 35689999999988765211122 22234566665555665522 22 4443
Q ss_pred ceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHh
Q 018231 113 GVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 191 (359)
Q Consensus 113 ~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i 191 (359)
+|++|+|++ ++..++.+++++||+|+++++.|+++.. .+...|.++..+++..+ +++.+|+++|++.+
T Consensus 106 --~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l 174 (416)
T 1bw0_A 106 --NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGIGMHFYNCRPE-NDWEADLDEIRRLK 174 (416)
T ss_dssp --GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEGG-GTTEECHHHHHHHC
T ss_pred --eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCcEEEEeecCcc-cCCCCCHHHHHHHh
Confidence 499999999 8887889999999999999977765432 33445666655654322 24678999999999
Q ss_pred hhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCC---CCCCC---C--CceEEEeCCCC
Q 018231 192 TLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV---IPSPF---E--YADVVTTTTHK 258 (359)
Q Consensus 192 ~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~---~~~~~---~--~~D~v~~s~~K 258 (359)
++ ++++++++ ++| +|...+ +++|.++|++||+++|+|++|+........ ...++ . +.++++.|++|
T Consensus 175 ~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK 253 (416)
T 1bw0_A 175 DD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK 253 (416)
T ss_dssp CT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTT
T ss_pred cc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchh
Confidence 87 78888877 877 887776 899999999999999999999763321110 01111 1 13578899999
Q ss_pred cCCCC--CceEEEEeCC--cchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 259 SLRGP--RGAMIFFRKG--VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 259 ~l~gp--~gG~l~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+++.| +.|+++++++ ... .+...+.... ....+++....+++.++|+.
T Consensus 254 ~~~~~Glr~G~~~~~~~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~ 305 (416)
T 1bw0_A 254 NLVVPGWRLGWLLYVDPHGNGP----------SFLEGLKRVG--MLVCGPCTVVQAALGEALLN 305 (416)
T ss_dssp TTSCGGGCCEEEEEECTTCSCH----------HHHHHHHHHH--HHHTCSCHHHHHHHHHHHHS
T ss_pred hCCCCCceEEEEEeeCchhhHH----------HHHHHHHHHh--ccccCCCcHHHHHHHHHHhc
Confidence 87543 4599998773 210 1221111100 01235677777888888764
No 109
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.82 E-value=8.6e-19 Score=172.71 Aligned_cols=173 Identities=18% Similarity=0.152 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--------CC-----C-eeeecCCCCCcccCc
Q 018231 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK--------PH-----D-RIMALDLPHGGHLSH 152 (359)
Q Consensus 88 ~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~--------~G-----d-~Vl~~~~~~~~~~~~ 152 (359)
....++|+.+++++++++|++.+. ..+++|+|++ ++..++.++.. +| + .|+++...|+++...
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~--~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~ 205 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKA 205 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCC--CCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHH
Confidence 556788888999999999997311 2599999999 88877777642 56 6 788888777765432
Q ss_pred cccccccceeeeee---eeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcEEEEc-CCC-CCChhhHHHHHHHHHHc
Q 018231 153 GYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVCNKQ 222 (359)
Q Consensus 153 ~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~~k~v~l~-~~n-~g~~~~l~~i~~la~~~ 222 (359)
. ...|. +++.++ .+ +++.+|+++|++++++. +|++|+++ ++| +|.+.|+++|+++|++|
T Consensus 206 ~--------~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~ 274 (504)
T 2okj_A 206 G--------AALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY 274 (504)
T ss_dssp H--------HHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHH
T ss_pred H--------HHcCCCcccEEEEe--cC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHc
Confidence 2 22232 455565 44 56899999999999763 47888888 666 89999999999999999
Q ss_pred CCEEEEeccccccccccCCCC---CCCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 223 KAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 223 ~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
|+++++|++|+.+........ .++.++|++++++||++++|.+ |+++++++
T Consensus 275 g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~ 329 (504)
T 2okj_A 275 NLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 329 (504)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred CCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH
Confidence 999999999988776421110 1122589999999999988887 99999884
No 110
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.81 E-value=1.9e-20 Score=177.14 Aligned_cols=191 Identities=12% Similarity=0.096 Sum_probs=137.5
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
+++..+...+++.+++++.+.+...+ |.......+ +++.+++++|.+. +++++|++ ++..
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~----l~~~la~~~~~~~------~i~~~sgt~al~~ 66 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRNW---------FILGDEDKK----FEQEFADYCNVNY------CIGCGNGLDALHL 66 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTC---------CSSSHHHHH----HHHHHHHHHTSSE------EEEESCHHHHHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCCC---------ccCCchHHH----HHHHHHHHhCCCe------EEEeCCHHHHHHH
Confidence 34443444457788888888776522 112234444 4588888999863 55555556 8888
Q ss_pred HHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC-
Q 018231 128 VYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA- 205 (359)
Q Consensus 128 ~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n- 205 (359)
++.++ +++||+|+++.++|.++.. .+...|.+++.++ .+++++.+|++++++.+++ ++++|+ ++|
T Consensus 67 ~l~~l~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~l~~-~~~~v~--~~n~ 133 (373)
T 3frk_A 67 ILKGYDIGFGDEVIVPSNTFIATAL--------AVSYTGAKPIFVE--PDIRTYNIDPSLIESAITE-KTKAII--AVHL 133 (373)
T ss_dssp HHHHTTCCTTCEEEEETTSCTHHHH--------HHHHHSCEEEEEC--EETTTTEECGGGTGGGCCT-TEEEEE--EECC
T ss_pred HHHHcCCCCcCEEEECCCCcHHHHH--------HHHHcCCEEEEEe--ccccccCcCHHHHHHhcCC-CCeEEE--EECC
Confidence 99999 9999999999988877643 2334566665554 5545688999999999987 888887 445
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeC--CCCcCCC-CCceEEEEeCC
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRKG 273 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s--~~K~l~g-p~gG~l~~~~~ 273 (359)
+|...|+++|.++|+++|+++|+|++|+.|... +....+ ...|++++| .||++++ +.||+++++++
T Consensus 134 ~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~ 202 (373)
T 3frk_A 134 YGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLY-KGMKVG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDK 202 (373)
T ss_dssp TTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETT-SSSSEEEEECCTTSSSCCSSSCEEEEESCH
T ss_pred CcCcccHHHHHHHHHHcCCEEEEECCcccCCEE-CCEecc-ccccEEEEeCcCCCccCccceeEEEEeCCH
Confidence 898999999999999999999999999987763 222111 125888888 5699977 56788888764
No 111
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.81 E-value=8.6e-21 Score=182.84 Aligned_cols=258 Identities=16% Similarity=0.090 Sum_probs=163.3
Q ss_pred ccccccccChHHHHHHHHHHHHhhcCceeeCCCC----CCcHHHHHHHHhhhhccC--CCCCCCCcccCCchhHHHHHHH
Q 018231 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESL 96 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~~~v~~al~~~~~~~~--~~g~~~~~~~~~~~~~~~l~~~ 96 (359)
++++...+.+..+..+.+. ....+.|+|..+.. .+++.+.+++.+.+.... ..+| +...+..+++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~-~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y------~~~~g~~~lr~~ 93 (425)
T 1vp4_A 21 ISKIGQNMKSSIIREILKF-AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQY------STTEGDPVLKQQ 93 (425)
T ss_dssp CCHHHHTCCCCCHHHHTTT-TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSC------CCTTCCHHHHHH
T ss_pred hhhhhhcCCCcHHHHHHHh-ccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCC------CCCCCCHHHHHH
Confidence 3344444444433433332 12345788876543 257889999988775410 0122 222345677767
Q ss_pred HHHHHHHHcC---CCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEe
Q 018231 97 CQKRALEAFR---LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (359)
Q Consensus 97 ~~~~~a~~~g---~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (359)
+.+++.+.+| ++++ +|++|+|++ ++..++.+++++||+|++..+.|.++. ..+...|.++..++
T Consensus 94 la~~l~~~~g~~~~~~~----~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--------~~~~~~g~~~~~v~ 161 (425)
T 1vp4_A 94 ILKLLERMYGITGLDED----NLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI--------NAFRQYLANFVVVP 161 (425)
T ss_dssp HHHHHHHHHCCCSCCGG----GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTCEEEEEE
T ss_pred HHHHHHhccCCCCCCcc----cEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--------HHHHHcCCEEEEec
Confidence 7777777668 4444 499999999 888789999999999999996665442 23444566665565
Q ss_pred cccCCCCCCCCHHHHHHHhhh-------hCCcEEE-Ec-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc
Q 018231 173 YRLNESTGYIDYDQLEKSATL-------FRPKLIV-AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA 239 (359)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~~-------~~~k~v~-l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~ 239 (359)
.+ ++ .+|+++|++.+++ .++++|+ ++ ++| +|.+.+ +++|.++|+++|+++|+|++|+......
T Consensus 162 --~~-~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g 237 (425)
T 1vp4_A 162 --LE-DD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG 237 (425)
T ss_dssp --EE-TT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSS
T ss_pred --cC-CC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC
Confidence 44 22 3899999998875 2688874 55 777 886654 6789999999999999999997644321
Q ss_pred CCCCCCC-----CCceEEEeCCCCcCC-CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHH
Q 018231 240 GVIPSPF-----EYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLA 313 (359)
Q Consensus 240 ~~~~~~~-----~~~D~v~~s~~K~l~-gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~ 313 (359)
. ....+ .+.++++.|++|+++ |.+.|++++++ ++.+.+....... ..+++.+..+++.
T Consensus 238 ~-~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~ 301 (425)
T 1vp4_A 238 E-TVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK--------------EFIRKIVQAKQSA-DLCSPAITHRLAA 301 (425)
T ss_dssp C-CCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH--------------HHHHHHHHHHHHH-HSSCCHHHHHHHH
T ss_pred C-CCcCHHHhCCCCCEEEEeccccccccccceEEEeeCH--------------HHHHHHHHHhhhh-cCCCCHHHHHHHH
Confidence 1 00111 136799999999986 22239999886 4444333211111 1244667777777
Q ss_pred HHHHHH
Q 018231 314 VALKQV 319 (359)
Q Consensus 314 ~Al~~~ 319 (359)
++|+..
T Consensus 302 ~~l~~~ 307 (425)
T 1vp4_A 302 RYLERY 307 (425)
T ss_dssp HHHHHS
T ss_pred HHHhcC
Confidence 777653
No 112
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.81 E-value=7.8e-19 Score=167.10 Aligned_cols=192 Identities=18% Similarity=0.196 Sum_probs=137.4
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~ 128 (359)
+++..+...+++++++++.+.+.+.+ ++. .....+ +++.+++++|.+. .|++++|+.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~-~~~~~~----l~~~la~~~~~~~-----~i~~~sGt~a~~~a 65 (390)
T 3b8x_A 4 INYPLASSTWDDLEYKAIQSVLDSKM--------FTM-GEYVKQ----YETQFAKTFGSKY-----AVMVSSGSTANLLM 65 (390)
T ss_dssp -CBCSCCCCCCHHHHHHHHHHHHHTC--------CSS-CHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHcCC--------CCC-ChHHHH----HHHHHHHHHCCCc-----EEEECCHHHHHHHH
Confidence 44445667789999999998886521 111 233444 4578888999863 46677777688878
Q ss_pred HHhh-------cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 129 YTAL-------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 129 ~~al-------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+.++ +++||+|+++.++|.++..+ +...|.+++.+ +.+++++.+|+++|++.+++ ++++|++
T Consensus 66 l~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~--------~~~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 134 (390)
T 3b8x_A 66 IAALFFTKKPRLKKGDEIIVPAVSWSTTYYP--------LQQYGLRVKFV--DIDINTLNIDIESLKEAVTD-STKAILT 134 (390)
T ss_dssp HHHTTSSSSCSCCTTCEEEEESSSCHHHHHH--------HHHTTCEEEEE--CBCTTTCSBCHHHHHHHCCT-TEEEEEE
T ss_pred HHHHHhhhhcCCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--ecCccccCcCHHHHHHHhCc-CCeEEEE
Confidence 8888 88999999999888776542 22346555555 45544588999999999987 8898888
Q ss_pred cCCCCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeC--CCCcCCCCCceEEEEeC
Q 018231 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRGPRGAMIFFRK 272 (359)
Q Consensus 202 ~~~n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s--~~K~l~gp~gG~l~~~~ 272 (359)
+ +.+|...++++|.++|+++|+++|+|++|+.|..+ +....+. ..|+.++| ++|.+.++.||++++++
T Consensus 135 ~-~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~g~-~~~~~~~s~~~~k~~~~g~gG~~~~~~ 204 (390)
T 3b8x_A 135 V-NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKCAGT-FGLMGTFSSFYSNHIATMEGGCIVTDD 204 (390)
T ss_dssp E-CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEETTS-SSSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred E-CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCccccc-ccceEEEEccCCCCCccCCceEEEeCC
Confidence 6 23677789999999999999999999999988766 3222221 13555544 34557667789999887
No 113
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.81 E-value=2e-20 Score=178.52 Aligned_cols=226 Identities=15% Similarity=0.108 Sum_probs=148.4
Q ss_pred cchhccccccccChHHHHHHHHHHHHhhcCceeeCCCC----CCcHHHHHHHHhhhhccC--CCCCCCCcccCCchhHHH
Q 018231 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDM 92 (359)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~~~v~~al~~~~~~~~--~~g~~~~~~~~~~~~~~~ 92 (359)
|..+++++...+.+..+..+.+. ...++.|+|..+.. .+++.+.+++.+.+.... ..+|+ ......+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~------~~~~~~~ 78 (397)
T 2zyj_A 6 WSEAFGKGAGRIQASTIRELLKL-TQRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYS------PTEGYAP 78 (397)
T ss_dssp HHHHSCGGGGGCCCCHHHHHHHH-HTSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCC------CTTCCHH
T ss_pred HHHHhhhhhcccCchHHHHHHhh-ccCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCC------CCCCCHH
Confidence 44445666666665555544443 22346788876542 257889999888765310 01222 1123344
Q ss_pred HHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEE
Q 018231 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (359)
Q Consensus 93 l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (359)
++ +.+++++|++++ +|++|+|++ ++..++.+++++||+|++..+.|+++. ..+...|.++..+
T Consensus 79 l~----~~la~~~g~~~~----~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~--------~~~~~~g~~~~~~ 142 (397)
T 2zyj_A 79 LR----AFVAEWIGVRPE----EVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAI--------QAFRLQGPRFLTV 142 (397)
T ss_dssp HH----HHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTCCEEEEE
T ss_pred HH----HHHHHHhCCChh----hEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--------HHHHHcCCEEEec
Confidence 44 677777787664 499999999 888788999999999999986665442 2334456666555
Q ss_pred ecccCCCCCCCCHHHHHHHhhhhCCcEEE-Ec-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCCCCC
Q 018231 172 PYRLNESTGYIDYDQLEKSATLFRPKLIV-AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (359)
Q Consensus 172 ~~~~~~~~~~~d~e~l~~~i~~~~~k~v~-l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (359)
+ .+ +++ +|+++|++.+++.++++|+ ++ ++| +|...+ +++|.++|++||+++|+|++|+.+..... ....
T Consensus 143 ~--~~-~~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~ 217 (397)
T 2zyj_A 143 P--AG-EEG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA-RLPS 217 (397)
T ss_dssp E--EE-TTE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC-CCCC
T ss_pred C--cC-CCC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC-CCCc
Confidence 5 44 223 8999999999765788875 45 667 886665 55899999999999999999976543211 0111
Q ss_pred CC--C------ceEEEeCCCCcCCC-CCceEEEEeC
Q 018231 246 FE--Y------ADVVTTTTHKSLRG-PRGAMIFFRK 272 (359)
Q Consensus 246 ~~--~------~D~v~~s~~K~l~g-p~gG~l~~~~ 272 (359)
+. + ..+++.|+||++++ .+.|++++++
T Consensus 218 ~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 253 (397)
T 2zyj_A 218 LFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP 253 (397)
T ss_dssp HHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCH
T ss_pred hhhhCcccCCCeEEEEecccccccccceeEEEecCH
Confidence 11 1 33889999999861 2239999876
No 114
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.81 E-value=1.4e-19 Score=185.79 Aligned_cols=203 Identities=19% Similarity=0.106 Sum_probs=143.2
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (359)
.++.+++++|.+. .+++++|++ ++.+++.++++|||+|+++.+.|.++... +...|+.++.++...
T Consensus 210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~--------~~~~G~~~v~v~~~~ 276 (755)
T 2vyc_A 210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG--------LMLTGAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH--------HHHHCCEEEEECCCB
T ss_pred HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH--------HHHcCCEEEEEeCCC
Confidence 5688999999864 488999988 88889999999999999999888776542 334576666665332
Q ss_pred CCCC--CCC-----CHHHHHHHhhhh-CCc--------EEEEcCCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccc
Q 018231 176 NEST--GYI-----DYDQLEKSATLF-RPK--------LIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (359)
Q Consensus 176 ~~~~--~~~-----d~e~l~~~i~~~-~~k--------~v~l~~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~ 238 (359)
+.-+ +.+ |+++|++++++. +++ +++++.+| +|.+.|+++|+++|++||+++++|+||+.+...
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhccc
Confidence 2001 235 999999999752 344 77777445 899999999999999999999999999754322
Q ss_pred cCC--CCCCCCC--ceE------EEeCCCCcCCCCCc-eEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHH
Q 018231 239 AGV--IPSPFEY--ADV------VTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNH 307 (359)
Q Consensus 239 ~~~--~~~~~~~--~D~------v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~ 307 (359)
.+. ...++.+ +|+ +++|+||+++|+.+ |+++++++.... + ...++........++|+++
T Consensus 357 ~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i---------~-~~~~~~~~~~~~s~sp~~~ 426 (755)
T 2vyc_A 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI---------N-FSRFNQAYMMHATTSPLYA 426 (755)
T ss_dssp CGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCC---------C-HHHHHHHHHHTSCSSCCHH
T ss_pred CcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCccccc---------C-HHHHHHHHHHhCCCCHHHH
Confidence 111 1122233 565 99999999999885 888887741000 0 1111111111124799999
Q ss_pred HHHHHHHHHHHHhcc
Q 018231 308 TITGLAVALKQVCTL 322 (359)
Q Consensus 308 ~i~al~~Al~~~~~~ 322 (359)
.++|+.+|++++..+
T Consensus 427 ~iaal~aA~~~l~~~ 441 (755)
T 2vyc_A 427 ICASNDVAVSMMDGN 441 (755)
T ss_dssp HHHHHHHHHHHHSTH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988765
No 115
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.81 E-value=3.1e-19 Score=176.32 Aligned_cols=171 Identities=14% Similarity=0.127 Sum_probs=132.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc-------C-CCC------eeeecCCCCCcccCc
Q 018231 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-------K-PHD------RIMALDLPHGGHLSH 152 (359)
Q Consensus 88 ~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~-------~-~Gd------~Vl~~~~~~~~~~~~ 152 (359)
....++++.+++++++++|++.+ ++++|+|++ ++..++.++. + +|| +|++++..|+++...
T Consensus 144 ~~~~~le~~~~~~la~l~g~~~~----~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~ 219 (515)
T 2jis_A 144 PVFVLMEEEVLRKLRALVGWSSG----DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKG 219 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSC----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC----CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHH
Confidence 55677888899999999999753 599999988 8877766652 2 676 788888777766432
Q ss_pred cccccccceeeeee---eeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcEEEEc-CCC-CCChhhHHHHHHHHHHc
Q 018231 153 GYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVCNKQ 222 (359)
Q Consensus 153 ~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~~k~v~l~-~~n-~g~~~~l~~i~~la~~~ 222 (359)
. ...|. +++.++ .+ +++.+|+++|++++++. +|++|+++ ++| +|.+.|+++|+++|+++
T Consensus 220 ~--------~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~ 288 (515)
T 2jis_A 220 A--------AFLGLGTDSVRVVK--AD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRH 288 (515)
T ss_dssp H--------HHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred H--------HHcCCCCCcEEEEe--cC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHc
Confidence 2 22233 455565 45 56889999999999763 47888887 666 89999999999999999
Q ss_pred CCEEEEeccccccccccCCCC---CCCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 223 KAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 223 ~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
|+++|+|++|+.+..+.+... .++.++|++++++|||+++|.| |+++++++
T Consensus 289 g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred CCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 999999999998887654211 1122589999999999998988 99999886
No 116
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.81 E-value=5e-19 Score=173.08 Aligned_cols=202 Identities=11% Similarity=0.101 Sum_probs=140.3
Q ss_pred ceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHH
Q 018231 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (359)
Q Consensus 49 i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~ 127 (359)
+.|........|.+.+++.+.+.. | ..|... ....+..++++.+++++++++|++. .+++++|++ ++..
T Consensus 69 ~~lg~~~~~~~p~v~~~~~~~~~~-~-~~~~~~---~~~~g~~~l~~~l~~~la~~~g~~~-----~~~~~~ggt~a~~~ 138 (474)
T 1wyu_B 69 YPLGSCTMKYNPKLHEEAARLFAD-L-HPYQDP---RTAQGALRLMWELGEYLKALTGMDA-----ITLEPAAGAHGELT 138 (474)
T ss_dssp CCBTTTCCCCCCHHHHHHHHTTSS-C-CTTSCG---GGCHHHHHHHHHHHHHHHHHHTCSE-----EECCCSSHHHHHHH
T ss_pred cccccccccCCHHHHHHHHHHHHh-c-CCCCch---hhChHHHHHHHHHHHHHHHHHCCCc-----eeecChHHHHHHHH
Confidence 455522233446677777665322 2 111110 0134566777788999999999875 366777777 7765
Q ss_pred HHHhh----cCCCC-----eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcE
Q 018231 128 VYTAL----LKPHD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (359)
Q Consensus 128 ~~~al----~~~Gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~ 198 (359)
++.++ .++|| +|+++.+.|+++.. .+...|.+++.++ .+ +++.+|+++|++++++ ++++
T Consensus 139 al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~--------~~~~~G~~vv~v~--~~-~~~~~d~~~L~~~i~~-~t~~ 206 (474)
T 1wyu_B 139 GILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPA--------TASMAGYQVREIP--SG-PEGEVDLEALKRELGP-HVAA 206 (474)
T ss_dssp HHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHH--------HHHHTTCEEEEEC--BC-TTSSBCHHHHHHHCST-TEEE
T ss_pred HHHHHHHHHHhcCCccCCCEEEEeCCcChhhHH--------HHHHCCCEEEEec--CC-CCCCcCHHHHHHhhCC-CceE
Confidence 44443 46888 99999977776543 2345576666665 44 5688999999999987 8999
Q ss_pred EEEcCCC-CCCh-hhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCC------ceEEEE
Q 018231 199 IVAGASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR------GAMIFF 270 (359)
Q Consensus 199 v~l~~~n-~g~~-~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~------gG~l~~ 270 (359)
|+++.+| +|.+ .++++|.++|++||+++|+|++|+.+.... ... .-.++|++++|+||+|++|. .|++++
T Consensus 207 v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~-~~~-~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 207 LMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGW-ARP-GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp EEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTT-CCH-HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred EEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccC-CCc-ccCCCcEEEEeCccccccCCCCCCCCeEEEEE
Confidence 9998445 8877 699999999999999999999997665421 110 00148999999999998663 399999
Q ss_pred eCCc
Q 018231 271 RKGV 274 (359)
Q Consensus 271 ~~~~ 274 (359)
++++
T Consensus 285 ~~~l 288 (474)
T 1wyu_B 285 KAHL 288 (474)
T ss_dssp CGGG
T ss_pred cHHH
Confidence 8864
No 117
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.81 E-value=6.6e-20 Score=176.99 Aligned_cols=170 Identities=14% Similarity=0.151 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecC-CCCCcccCcccc--ccccceeeeeeeeEE
Q 018231 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQ--TDTKKISAVSIFFET 170 (359)
Q Consensus 94 ~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~-~~~~~~~~~~~~--~~~~~~~~~g~~~~~ 170 (359)
++.+++++++++|++... ..++++||+.++..++.++++|||+|++++ +.|+++...... .++......|.+++.
T Consensus 67 ~~~l~~~la~~~g~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~ 144 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA 144 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred HHHHHHHHHHHhCCCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence 344668999999997532 123467776688889999999999999998 777765321100 001122334655544
Q ss_pred EecccCCCCCCCCHHHHHHHhhhhCCcEEEEc--CCC----CCChhhHHHHHHHHHH--cCCEEEEeccccccccccCCC
Q 018231 171 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA----YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVI 242 (359)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~--~~n----~g~~~~l~~i~~la~~--~~~~vivD~a~~~g~~~~~~~ 242 (359)
+ +.+ +++.+|+++|++++++ +|++|+++ ++| ++...++++|.++|++ +|+++|+|++|+.+.......
T Consensus 145 v--~~~-~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 145 V--PLT-EGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp C--CBC-TTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred e--CCC-CCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 4 455 4588999999999987 89999987 222 4578899999999999 999999999998776433222
Q ss_pred CCCCCCceEEEeCCCCcCCC---CCceEEEEeC
Q 018231 243 PSPFEYADVVTTTTHKSLRG---PRGAMIFFRK 272 (359)
Q Consensus 243 ~~~~~~~D~v~~s~~K~l~g---p~gG~l~~~~ 272 (359)
.. ++|++++|++|+++| +.||++++++
T Consensus 221 ~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~ 250 (431)
T 3ht4_A 221 HV---GADLMAGSLIKNPGGGIVKTGGYIVGKE 250 (431)
T ss_dssp GT---TCSEEEEETTSGGGTTTCSSCEEEEECH
T ss_pred cc---CCeEEEcCccccCCCCCCCceEEEEecH
Confidence 22 489999999999876 7789999987
No 118
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.81 E-value=5.7e-19 Score=170.13 Aligned_cols=242 Identities=13% Similarity=0.066 Sum_probs=153.4
Q ss_pred cCceeeCCCCCC-cHHHHHHHHhhhhccC-CCC---CCCCcccCCchhHHHHHHHHHHHHHHHcC----CCCCCCceeEE
Q 018231 47 KGLELIPSENFT-SVSVMQAVGSVMTNKY-SEG---YPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQ 117 (359)
Q Consensus 47 ~~i~l~~~~~~~-~~~v~~al~~~~~~~~-~~g---~~~~~~~~~~~~~~~l~~~~~~~~a~~~g----~~~~~~~~~v~ 117 (359)
..|+|..++++. ++.+.+++.+...... .++ ......|+...+..++++++.+++.+.+| ++++ +|+
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~----~i~ 112 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE----RVV 112 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT----SCE
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh----hEE
Confidence 457888888875 4566777764321000 000 00001233334456777777777777777 4454 499
Q ss_pred ECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCC-CCCCCCHHHHHHHhhhh-
Q 018231 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF- 194 (359)
Q Consensus 118 ~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~- 194 (359)
+|+|++ ++..++.++++|||+|+++.+.|+++... .....|.+++.++ .+. +++.+|++++++.+++.
T Consensus 113 ~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~-------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~ 183 (428)
T 1iay_A 113 MAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRD-------LRWRTGVQLIPIH--CESSNNFKITSKAVKEAYENAQ 183 (428)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHH-------TTTTTCCEEEEEC--CCTTTTTCCCHHHHHHHHHHHH
T ss_pred EccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHH-------HHHhcCCEEEEee--cCCccCCcCCHHHHHHHHHHHH
Confidence 999998 88878899999999999999777654321 1123465565555 332 34678999999988742
Q ss_pred ----CCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCC-C-CCCC-C-------ce--EEE
Q 018231 195 ----RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI-P-SPFE-Y-------AD--VVT 253 (359)
Q Consensus 195 ----~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~-~-~~~~-~-------~D--~v~ 253 (359)
++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|+......... . ..+. . .| +++
T Consensus 184 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~ 263 (428)
T 1iay_A 184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIV 263 (428)
T ss_dssp HTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEE
T ss_pred hcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEE
Confidence 68888877 888 898777 8899999999999999999997643321100 0 0000 1 46 889
Q ss_pred eCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 254 TTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 254 ~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
.|+||+|+ |.+.|+++++++ ++.+.+..... ..+.+.+..+++.++++
T Consensus 264 ~s~sK~~g~~Glr~G~~~~~~~-------------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~ 313 (428)
T 1iay_A 264 YSLSKDMGLPGFRVGIIYSFND-------------DVVNCARKMSS---FGLVSTQTQYFLAAMLS 313 (428)
T ss_dssp EESTTTSSCGGGCEEEEEESCH-------------HHHHHHHHHHT---TSCCCHHHHHHHHHHTT
T ss_pred ecchhhcCCCCceEEEEEeCCH-------------HHHHHHHHHHh---cccCCHHHHHHHHHHhc
Confidence 99999884 333499998543 44444433211 13455566566555554
No 119
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.81 E-value=5.4e-20 Score=175.83 Aligned_cols=188 Identities=14% Similarity=0.121 Sum_probs=134.5
Q ss_pred HHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc
Q 018231 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (359)
Q Consensus 96 ~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (359)
.+++++++++|.+. .+++++|+.++..++.+++++||+|+++++.|+++...... .+...|.+++.++ .
T Consensus 68 ~l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~----~~~~~g~~~~~v~--~ 136 (398)
T 2rfv_A 68 ALEKKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSH----SMPKFGINVRFVD--A 136 (398)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHT----HHHHTTCEEEEEC--T
T ss_pred HHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHH----HHHHcCCEEEEeC--C
Confidence 36688999999862 47788877788878899999999999999888765432210 0123455554443 3
Q ss_pred CCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEE
Q 018231 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (359)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (359)
+ |++++++.+++ ++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.+...... .. ++|+++
T Consensus 137 ~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~di~~ 205 (398)
T 2rfv_A 137 A------KPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL-QL---GADIVV 205 (398)
T ss_dssp T------SHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCSEEE
T ss_pred C------CHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCcEEE
Confidence 3 89999999987 89999988 777 899999999999999999999999999877653211 12 489999
Q ss_pred eCCCCcCCCCC---ceEEEEeCCcchhccCCcchhhhHHH-hhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018231 254 TTTHKSLRGPR---GAMIFFRKGVKEINKQGKEVFYDYEE-KINQAVFPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
+|+||+|++|. +|+++++++ +.+ .+.........++++....+++.++++.+
T Consensus 206 ~s~sK~~~~~g~~~~G~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (398)
T 2rfv_A 206 HSVTKYINGHGDVIGGIIVGKQE--------------FIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL 261 (398)
T ss_dssp EETTTTTTCSSCCCCEEEEECHH--------------HHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH
T ss_pred EeCcccccCCCCceEEEEEECHH--------------HHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH
Confidence 99999998765 388888773 222 22211111113466667767776777543
No 120
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.81 E-value=7.1e-20 Score=186.60 Aligned_cols=207 Identities=16% Similarity=0.083 Sum_probs=143.2
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (359)
+++.+++++|++. .+++++|++ ++.+++.++++|||+|+++.+.|.++... .+.+.|+.++.++...
T Consensus 178 ~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~-------~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 178 AEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS-------ALAMAGGRPVYLQTNR 245 (730)
T ss_dssp HHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH-------HTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH-------HHHHCCCEEEEEeCCc
Confidence 6689999999975 488999997 88889999999999999999888776532 0334566665554322
Q ss_pred CCC--CCCCCHHHH-----HHHhhhhC------C----cEEEEcCCC-CCChhhHHHHHHHHHHcCCEEEEecccccccc
Q 018231 176 NES--TGYIDYDQL-----EKSATLFR------P----KLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (359)
Q Consensus 176 ~~~--~~~~d~e~l-----~~~i~~~~------~----k~v~l~~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~ 237 (359)
+.- .+.+|+++| ++++++ + + |+++++.+| +|.+.|+++|+++|+++|+++++|+||+.+..
T Consensus 246 ~~~~i~g~id~e~L~~~~le~~i~~-~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 246 NPYGFIGGIYDSDFDEKKIRELAAK-VDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp CTTCCEEEECGGGSCHHHHHHHTTT-SSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred cccCccCCCCHHHHhhhHHHHHhhc-CCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccc
Confidence 200 123678877 888876 3 5 888887445 89999999999999999999999999975432
Q ss_pred ccC----CCCCCC--CCce----EEEeCCCCcCCCCCc-eEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcH
Q 018231 238 AAG----VIPSPF--EYAD----VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHN 306 (359)
Q Consensus 238 ~~~----~~~~~~--~~~D----~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~ 306 (359)
..+ ...... .++| ++++|+||+++|+.+ |+++++++.. .++.... + ...++........++|++
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l---~g~~~~i-~-~~~~~~~~~~~~stsp~~ 399 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI---KGQLRYC-D-HKHFNNSFNLFMSTSPFY 399 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG---TTSTTCC-C-HHHHHHHHHHHSCSSCCH
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh---cCccccc-C-HHHHHHHHHHhCCCCCcH
Confidence 111 111111 1377 999999999999876 7888887521 1111000 1 111111111112478999
Q ss_pred HHHHHHHHHHHHHhc
Q 018231 307 HTITGLAVALKQVCT 321 (359)
Q Consensus 307 ~~i~al~~Al~~~~~ 321 (359)
..++|+.+|++++..
T Consensus 400 ~~iaal~aA~~~l~~ 414 (730)
T 1c4k_A 400 PMYAALDVNAAMQEG 414 (730)
T ss_dssp HHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998776
No 121
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.80 E-value=2.9e-19 Score=171.51 Aligned_cols=223 Identities=12% Similarity=0.074 Sum_probs=143.5
Q ss_pred cccChHHHHHHHHHHHHh-----hcCceeeCCC-------CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHH
Q 018231 28 EVVDPEIADIIEHEKARQ-----WKGLELIPSE-------NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (359)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~-----~~~i~l~~~~-------~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 95 (359)
+..++.++....+..+.. .+.|+|..++ .++++.+.+++.+...... .+| +...+..++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr~ 87 (418)
T 3rq1_A 15 KKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGY------APIAGIPDFLC 87 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSC------CCTTCCHHHHH
T ss_pred CCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCC------CCCCChHHHHH
Confidence 445666777665543322 2568888763 3578888888876543211 022 22234566776
Q ss_pred HHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecc
Q 018231 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (359)
Q Consensus 96 ~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (359)
++.+++....+.+.. .+|++|+|++ ++..++.++++|||+|+++++.|.++ ...+...|.+++.++
T Consensus 88 ~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~--------~~~~~~~g~~~~~v~-- 154 (418)
T 3rq1_A 88 AAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAY--------RVICSDTGRTLVTYS-- 154 (418)
T ss_dssp HHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHH--------HHHHHHTTCEEEEEC--
T ss_pred HHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhH--------HHHHHHcCCEEEEEe--
Confidence 677777666664422 2599999999 88889999999999999999655543 334455676665554
Q ss_pred cCCCCCCCCHHHHHHHhhhh---CCc-EEEEc-C-CC-CCChhhH---HHHHHHHH------HcCCEEEEeccccccccc
Q 018231 175 LNESTGYIDYDQLEKSATLF---RPK-LIVAG-A-SA-YARLYDY---ERIRKVCN------KQKAIMLADMAHISGLVA 238 (359)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~---~~k-~v~l~-~-~n-~g~~~~l---~~i~~la~------~~~~~vivD~a~~~g~~~ 238 (359)
.+++++.+|+++|++.+++. +++ +++++ | +| +|...+. ++|+++|+ +||+++|+|++|......
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~ 234 (418)
T 3rq1_A 155 LFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGE 234 (418)
T ss_dssp SBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSC
T ss_pred eeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCC
Confidence 43345789999999998752 566 67776 7 77 8876664 45566666 899999999998422111
Q ss_pred c----CC-CCCCCCCc---eEEEeCCCCcCC--CCCceEEEE
Q 018231 239 A----GV-IPSPFEYA---DVVTTTTHKSLR--GPRGAMIFF 270 (359)
Q Consensus 239 ~----~~-~~~~~~~~---D~v~~s~~K~l~--gp~gG~l~~ 270 (359)
. .. ...+-..- .+++.|++|+++ |.+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 235 KDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp HHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEE
T ss_pred hHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEE
Confidence 0 00 00000001 278899999874 333498887
No 122
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.80 E-value=2.4e-19 Score=172.42 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=150.5
Q ss_pred hhcccCCCcchhccccccccChHHHHHHHHHHHH--hhcCceeeCC---CC----CCcHHHHHHHHhhhhccCCCCCCCC
Q 018231 11 EKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKAR--QWKGLELIPS---EN----FTSVSVMQAVGSVMTNKYSEGYPGA 81 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~---~~----~~~~~v~~al~~~~~~~~~~g~~~~ 81 (359)
|..|.+.++..+. ++++.++++.+..+.+.... ..+.|+|..| ++ ++++.|++++.+.+.+....+|
T Consensus 13 ~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y--- 88 (420)
T 4f4e_A 13 EAQTQGPGSMSLF-SAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGY--- 88 (420)
T ss_dssp ---------CCTT-TTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCC---
T ss_pred hhhhcCccccCHh-hcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCC---
Confidence 4456666555544 56677777654444443332 2367899877 22 2348999999998775221223
Q ss_pred cccCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeEEECCChH-HHHHH--HHhhcCCCCeeeecCCCCCcccCccccc
Q 018231 82 RYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQT 156 (359)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~--~~al~~~Gd~Vl~~~~~~~~~~~~~~~~ 156 (359)
+...+..++++++.+++....+. +++. .+|++|+|++ ++..+ +.++++|||+|+++++.|.++
T Consensus 89 ---~~~~g~~~lr~~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~------- 156 (420)
T 4f4e_A 89 ---LPIDGIAAYDASVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENH------- 156 (420)
T ss_dssp ---CCTTCCHHHHHHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHH-------
T ss_pred ---CCCCCcHHHHHHHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhH-------
Confidence 22344566666666666544332 3331 1499999999 77766 456789999999999655543
Q ss_pred cccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh--hCCcEEEEc-CCC-CCCh---hhHHHHHHHHHHcCCEEEEe
Q 018231 157 DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 157 ~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~~k~v~l~-~~n-~g~~---~~l~~i~~la~~~~~~vivD 229 (359)
...+...|.++..+++. +++++.+|++++++.+++ .++++++++ ++| ||.. .++++|+++|++||+++|+|
T Consensus 157 -~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 234 (420)
T 4f4e_A 157 -RALFDMAGFEVVAYPYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLD 234 (420)
T ss_dssp -HHHHHHTTCCEEEEECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred -HHHHHHcCCeEEEeeee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Confidence 32445567667666642 225688999999999973 267888887 888 8855 45778999999999999999
Q ss_pred ccccccccccCCCCCC------CCCceEEEeCCCCcCC--CCCceEEEE
Q 018231 230 MAHISGLVAAGVIPSP------FEYADVVTTTTHKSLR--GPRGAMIFF 270 (359)
Q Consensus 230 ~a~~~g~~~~~~~~~~------~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (359)
++++......+....+ ..+.++++.|++|+++ |.+-|++++
T Consensus 235 e~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 235 IAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp ESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred cccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 9985333211000000 1125799999999874 333388875
No 123
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.80 E-value=2.3e-20 Score=181.24 Aligned_cols=194 Identities=16% Similarity=0.132 Sum_probs=134.7
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (359)
+++++++ +|++. .+++|+|++ ++.+++.+++++||+|+++.+.|.++.. .+...|+.++.++...
T Consensus 62 ~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~ 127 (446)
T 2x3l_A 62 SMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQEGHFIETHQ 127 (446)
T ss_dssp HHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTCCEEECEEEE
T ss_pred HHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCCeEEEEeCee
Confidence 5688999 99862 599999998 8888999999999999999987776644 2334566665555432
Q ss_pred CCCC----CCCCHHHHHHHhhhhCCcEEEEcCCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCC-C-C
Q 018231 176 NEST----GYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-E-Y 248 (359)
Q Consensus 176 ~~~~----~~~d~e~l~~~i~~~~~k~v~l~~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~-~-~ 248 (359)
+ ++ +.+|+++| +.+ ++++++++++| +|.+.|+++|.++|++||+++|+|++|+. ...+.-..... . +
T Consensus 128 ~-~~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g 201 (446)
T 2x3l_A 128 S-PLTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQ 201 (446)
T ss_dssp C-TTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGT
T ss_pred c-cccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcC
Confidence 4 22 46788887 445 79999988544 89999999999999999999999999976 33221111111 1 4
Q ss_pred ceEEEeCCCCcCCCCCc-eEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 249 ADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 249 ~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
+|++++|+||+++|+.| |+++++++.. + ...+.........++++...++++.++++++...
T Consensus 202 ~Di~~~S~~K~l~~~~g~g~l~~~~~~i-----------~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~ 264 (446)
T 2x3l_A 202 ADYVVQSFHKTLPALTMGSVLYIHKNAP-----------Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTY 264 (446)
T ss_dssp CSEEEECHHHHSSSCTTCEEEEEETTCT-----------T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCccccccccccEEEEEcCCcC-----------C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHh
Confidence 89999999999888766 9999988521 1 1111111001124688999999999999887754
No 124
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.80 E-value=2.4e-19 Score=171.33 Aligned_cols=193 Identities=16% Similarity=0.099 Sum_probs=139.0
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~ 126 (359)
..+++.+++++.++.+++++.+.+... .| .......+ +++.+++++|.+. .+++++|+.++.
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~---~y------~~~~~~~~----l~~~la~~~~~~~-----~v~~~~Gt~a~~ 92 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG---RY------LLGPELEG----FEAEFAAYCETDH-----AVGVNSGMDALQ 92 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT---CC------SSSHHHHH----HHHHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC---CC------CCchhHHH----HHHHHHHHHCCCe-----EEEecCHHHHHH
Confidence 457777777766799999999887641 11 11133343 5588899999862 366666644888
Q ss_pred HHHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 018231 127 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (359)
Q Consensus 127 ~~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n 205 (359)
.++.++ +++||+|+++.+.|+++.. .+...|.+++.++ .+++++.+|+++|++.+++ ++++|++ +|
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~--~n 159 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWL--------AVSATGATPVPVE--PHEDHPTLDPLLVEKAITP-RTRALLP--VH 159 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCSSSSSBCHHHHHHHCCT-TEEEECC--BC
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHH--------HHHHCCCEEEEEe--cCCCCCCcCHHHHHHhcCC-CCeEEEE--eC
Confidence 889998 8999999999977766432 2334566665554 4534578999999999987 7887764 44
Q ss_pred -CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCC--CCcCCCC-CceEEEEeC
Q 018231 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGP-RGAMIFFRK 272 (359)
Q Consensus 206 -~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~--~K~l~gp-~gG~l~~~~ 272 (359)
+|...++++|.++|+++|+++|+|++|+.|... +..... ...|++++|+ +|+++++ ++|++++++
T Consensus 160 ~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~ 228 (399)
T 2oga_A 160 LYGHPADMDALRELADRHGLHIVEDAAQAHGARY-RGRRIG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGD 228 (399)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEETT-CTTCEEEEECCTTSSSCCSSCCEEEEESC
T ss_pred CcCCccCHHHHHHHHHHcCCEEEEECcccccCcc-CCeecc-cccCEEEEeCCCCccCCcCCceEEEEeCC
Confidence 898899999999999999999999999877543 211111 1259999998 5988653 568888864
No 125
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.80 E-value=6.1e-19 Score=168.30 Aligned_cols=232 Identities=16% Similarity=0.089 Sum_probs=152.8
Q ss_pred ceeeCCCC-C--CcHHHHHHHHhhhhccCCCCCCC-CcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHH
Q 018231 49 LELIPSEN-F--TSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 124 (359)
Q Consensus 49 i~l~~~~~-~--~~~~v~~al~~~~~~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a 124 (359)
+++..+++ . .+|.+++++.+.+.+.. .+... ...|+......+ +++.+++++|.+ + .|++++|+++
T Consensus 49 i~~~~~~~~~~~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~----l~~~la~~~~~~-~----~i~~~sG~~a 118 (401)
T 2bwn_A 49 TVWCGNDYLGMGQHPVVLAAMHEALEAVG-AGSGGTRNISGTTAYHRR----LEAEIAGLHQKE-A----ALVFSSAYNA 118 (401)
T ss_dssp EECSCSCTTSGGGCHHHHHHHHHHHHHHC-SCCCSBTTTBCCBHHHHH----HHHHHHHHTTCS-E----EEEESCHHHH
T ss_pred EEeeCCCcccCCCCHHHHHHHHHHHHHcC-CCCCCcCcccCChHHHHH----HHHHHHHHhCCC-c----EEEECCcHHH
Confidence 56655544 2 46789999998876521 11111 112333334444 558889999874 2 5999999887
Q ss_pred HHHHHHhh--cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh---hCCcEE
Q 018231 125 NFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLI 199 (359)
Q Consensus 125 ~~~~~~al--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~~k~v 199 (359)
+..++.++ +.|||+|++..+.|+++..+ +...|.+++.++ .+ |++++++.++. .++++|
T Consensus 119 ~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~v~--~~------d~~~le~~l~~~~~~~~~~v 182 (401)
T 2bwn_A 119 NDATLSTLRVLFPGLIIYSDSLNHASMIEG--------IKRNAGPKRIFR--HN------DVAHLRELIAADDPAAPKLI 182 (401)
T ss_dssp HHHHHHHHHHHSTTCEEEEETTCCHHHHHH--------HHHSCCCEEEEC--TT------CHHHHHHHHHHSCTTSCEEE
T ss_pred HHHHHHHHhcCCCCCEEEECchhhHHHHHH--------HHHcCCeEEEEc--CC------CHHHHHHHHHhhccCCceEE
Confidence 77666655 36999999999888766432 233465565554 33 78999988872 278898
Q ss_pred EEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccc-cCC---CCCCC-CCceEEEeCCCCcCCCCCceEEEEeC
Q 018231 200 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGV---IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 200 ~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~-~~~---~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (359)
+++ ++| +|.+.|+++|.++|++||+++|+|++|+.|.+. .+. ....+ ...|+++.|++|+|++ .||+++.++
T Consensus 183 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~ 261 (401)
T 2bwn_A 183 AFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASA 261 (401)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECH
T ss_pred EEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCH
Confidence 887 667 899999999999999999999999999876542 110 00111 1258999999999865 468888865
Q ss_pred CcchhccCCcchhhhHHHhhccccCC--CCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 273 GVKEINKQGKEVFYDYEEKINQAVFP--GLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++.+.+.....+ ...++++ ...+++.++++++.+.
T Consensus 262 --------------~~~~~l~~~~~~~~~~~~~~~-~~~~a~~~al~~~~~~ 298 (401)
T 2bwn_A 262 --------------RMVDAVRSYAPGFIFSTSLPP-AIAAGAQASIAFLKTA 298 (401)
T ss_dssp --------------HHHHHHHHHCHHHHTSBCCCH-HHHHHHHHHHHHHTSH
T ss_pred --------------HHHHHHHHhCcCceecCCCCH-HHHHHHHHHHHHHHhc
Confidence 333333221111 1124555 7778888899887653
No 126
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.80 E-value=9e-19 Score=165.03 Aligned_cols=224 Identities=14% Similarity=0.059 Sum_probs=147.8
Q ss_pred cCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-
Q 018231 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (359)
Q Consensus 47 ~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~- 123 (359)
+.|+|..++++ +++.+++++.+.+.... +|+. ....+ +++.+++++|++++ +|++|+|++
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~----l~~~la~~~~~~~~----~v~~~~g~~~ 87 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCIE--RYPD-------ADYFH----LHQALARHHQVPAS----WILAGNGETE 87 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGGG--SCCC-------TTCHH----HHHHHHHHHTSCGG----GEEEESSHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHhh--cCCC-------CCHHH----HHHHHHHHHCcCHH----HEEECCCHHH
Confidence 46889887764 67999999988775411 2221 12333 45778888898765 499999999
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 018231 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (359)
Q Consensus 124 a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~- 202 (359)
++..++.++ +||+|++..+.|.++.. .+...|.++..++...+ +++.+ ++++.+.+++ ++++++++
T Consensus 88 al~~~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~-l~~~~~~~~~-~~~~v~i~~ 154 (364)
T 1lc5_A 88 SIFTVASGL--KPRRAMIVTPGFAEYGR--------ALAQSGCEIRRWSLREA-DGWQL-TDAILEALTP-DLDCLFLCT 154 (364)
T ss_dssp HHHHHHHHH--CCSEEEEEESCCTHHHH--------HHHHTTCEEEEEECCGG-GTTCC-CTTHHHHCCT-TCCEEEEES
T ss_pred HHHHHHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCCeEEEEeCCcc-cccch-hHHHHHhccC-CCCEEEEeC
Confidence 877777777 78999999966655422 33445666655653221 23333 5656666655 78988876
Q ss_pred CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccc-cCC-CCCCCCCceEEEeCCCCcCC--CCCceEEE-EeCC
Q 018231 203 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGV-IPSPFEYADVVTTTTHKSLR--GPRGAMIF-FRKG 273 (359)
Q Consensus 203 ~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~-~~~-~~~~~~~~D~v~~s~~K~l~--gp~gG~l~-~~~~ 273 (359)
++| +|.+.+ +++|.++|++||+++|+|++|+.+... ... ......+.|++++|++|+++ |.+.|+++ .++
T Consensus 155 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~- 233 (364)
T 1lc5_A 155 PNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD- 233 (364)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH-
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH-
Confidence 877 887776 889999999999999999999754431 110 00011237899999999985 33349998 665
Q ss_pred cchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 274 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
++.+.+..... ..+++.+..+++.++|+
T Consensus 234 -------------~~~~~l~~~~~---~~~~~~~~~~~~~~~l~ 261 (364)
T 1lc5_A 234 -------------AAMARMRRQQM---PWSVNALAALAGEVALQ 261 (364)
T ss_dssp -------------HHHHHHHHHSC---TTCSCHHHHHHHHHGGG
T ss_pred -------------HHHHHHHHhCC---CCCCCHHHHHHHHHHHh
Confidence 44444443221 23566676666666664
No 127
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.80 E-value=5.3e-19 Score=166.33 Aligned_cols=221 Identities=16% Similarity=0.094 Sum_probs=151.4
Q ss_pred cCceeeCCCCC--CcHHHHHHHHhhhhccC--CCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 47 KGLELIPSENF--TSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~~--~~~~v~~al~~~~~~~~--~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
+.|+|..++++ +++.+++++.+.+.+.. ..+|+. . ...+ +++++++++|++++ +|++|+|+
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~-~~~~----lr~~la~~~g~~~~----~i~~t~g~ 91 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPS------A-SSQK----LREVAGELYGFDPS----WIIMANGS 91 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCC------S-SCHH----HHHHHHHHHTCCGG----GEEEESSH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCC------C-chHH----HHHHHHHHhCcCcc----eEEEcCCH
Confidence 56899888774 58999999999876520 112222 1 1233 55788888898765 49999999
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+ ++..++.+++++||+|+++.+.|.++. ..+...|.++..++ .+ +++.+ +++++. .+++++++
T Consensus 92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~--------~~~~~~g~~~~~v~--~~-~~~~~--~~l~~~---~~~~~v~i 155 (360)
T 3hdo_A 92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYG--------TLAEVQGARVRTFG--LT-GDFRI--AGFPER---YEGKVFFL 155 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSSCTHHH--------HHHHHHTCEEEEEC--BC-TTSSB--TTCCSS---BCSSEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCChHHHH--------HHHHHCCCEEEEee--CC-CCCCH--HHHHhh---cCCCEEEE
Confidence 9 888899999999999999996666543 23445566665554 44 33444 444332 25778888
Q ss_pred c-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCC---CCceEEEeCCCCcCC--CCCceEEEEeCCc
Q 018231 202 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (359)
Q Consensus 202 ~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~---~~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (359)
+ ++| +|.+.|+++|.++|+++|+++|+|++|+... .. ....+ .+.+++++|++|+++ |.+.|++++++
T Consensus 156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~-~~--~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-- 230 (360)
T 3hdo_A 156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFA-ES--NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP-- 230 (360)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGS-SC--CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhC-Cc--chhHHhccCCCEEEEecchHhhcCCccceeeEeeCH--
Confidence 7 777 8999999999999999999999999987421 10 01000 135689999999874 34449998866
Q ss_pred chhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 275 KEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 275 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.+.+..... ..+++.+..+++.++|+.
T Consensus 231 ------------~~~~~~~~~~~---~~~~~~~~~~a~~~~l~~ 259 (360)
T 3hdo_A 231 ------------EVIAALDKIRD---HYNLDRLAQAACVAALRD 259 (360)
T ss_dssp ------------HHHHHHHHHSC---SCCSCHHHHHHHHHHHHC
T ss_pred ------------HHHHHHHHhCC---CCCCCHHHHHHHHHHhcC
Confidence 55555443322 245777887888787764
No 128
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.80 E-value=5.5e-19 Score=171.28 Aligned_cols=204 Identities=12% Similarity=0.063 Sum_probs=134.3
Q ss_pred cCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHc--CCCCCCCceeEEECCCh
Q 018231 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF--RLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~--g~~~~~~~~~v~~tsG~ 122 (359)
+.|+|..+++ ++++.|++++.+.+..... ......|+...+..++++++.+++. + +++++ +|++|+|+
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~----~i~~t~G~ 141 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLAT--REGYSGYGAEQGQGALREAVASTFY--GHAGRAAD----EIFISDGS 141 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGG--SCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGG----GEEEESCH
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhcc--ccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHH----HEEEccCH
Confidence 5789988776 4689999999988774210 0111223333445666655555544 3 34554 49999999
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeee----------eEEEecccCCCCCCCCHHHHHHHh
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF----------FETMPYRLNESTGYIDYDQLEKSA 191 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~~~~~~~d~e~l~~~i 191 (359)
+ ++..+ .+++++||+|+++++.|.++.. .+...|.+ +..+++..+ +++..|++++
T Consensus 142 ~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---- 207 (449)
T 3qgu_A 142 KCDIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMVCNPD-NHFFPDLSKA---- 207 (449)
T ss_dssp HHHHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEECCGG-GTTCCCGGGC----
T ss_pred HHHHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEecccc-cCCcCChhHc----
Confidence 9 66645 8889999999999977765532 33344544 555553322 2455565432
Q ss_pred hhhCCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc----CCCCCCC-CCceEEEeCCCCcCC
Q 018231 192 TLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF-EYADVVTTTTHKSLR 261 (359)
Q Consensus 192 ~~~~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~~-~~~D~v~~s~~K~l~ 261 (359)
+ ++++|+++ ++| +|.+. ++++|+++|++||+++|+|++|+...... .+...+. .+.++++.|++|+|+
T Consensus 208 -~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 285 (449)
T 3qgu_A 208 -K-RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAG 285 (449)
T ss_dssp -C-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGT
T ss_pred -C-CCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcC
Confidence 3 79999987 888 88655 47888999999999999999997643321 1111111 136799999999884
Q ss_pred --CCCceEEEEeCCc
Q 018231 262 --GPRGAMIFFRKGV 274 (359)
Q Consensus 262 --gp~gG~l~~~~~~ 274 (359)
|.+.|+++++++.
T Consensus 286 ~~G~r~G~~~~~~~~ 300 (449)
T 3qgu_A 286 FTGVRLGWTVVPKAL 300 (449)
T ss_dssp CTTCCCEEEECCTTC
T ss_pred CccceeEEEecCHHH
Confidence 4444999998753
No 129
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.80 E-value=3.3e-19 Score=171.32 Aligned_cols=194 Identities=15% Similarity=0.141 Sum_probs=135.1
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhh-cC
Q 018231 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LK 134 (359)
Q Consensus 56 ~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al-~~ 134 (359)
.++++.+++++.+.+.+.....|+. .++. .++.+.+++.+++++|++. .|++++|+.++..++.++ ++
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~~--~~g~----~~l~~~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISGY--WTGE----ESMERKFAKAFADFNGVPY-----CVPTTSGSTALMLALEALGIG 80 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTSB--CCSS----CCHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHhcCCccccCc--ccCC----HHHHHHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCC
Confidence 4568999999999887521111211 1121 2223346688999999873 466666655888889998 89
Q ss_pred CCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHH
Q 018231 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYER 214 (359)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~ 214 (359)
+||+|+++.++|.++.. .+...|.+++.++ .+++++.+|+++|++.+++ ++++|+++. .+|...++++
T Consensus 81 ~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~ 148 (418)
T 2c81_A 81 EGDEVIVPSLTWIATAT--------AVLNVNALPVFVD--VEADTYCIDPQLIKSAITD-KTKAIIPVH-LFGSMANMDE 148 (418)
T ss_dssp TTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTCSBCHHHHGGGCCT-TEEEECCBC-CTTCCCCHHH
T ss_pred CcCEEEECCCccHhHHH--------HHHHcCCEEEEEe--cCCCCCCcCHHHHHHhhCC-CCeEEEEeC-CcCCcccHHH
Confidence 99999999988776643 2334566665554 5534688999999999987 788887652 2788899999
Q ss_pred HHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCceEEEEeC
Q 018231 215 IRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 215 i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (359)
|.++|+++|+++|+|++|+.+....+.....+..+++.++|+||+++++.||++++++
T Consensus 149 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~ 206 (418)
T 2c81_A 149 INEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKN 206 (418)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred HHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECC
Confidence 9999999999999999998886321111111112555666669998665668888864
No 130
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.80 E-value=3.6e-19 Score=168.23 Aligned_cols=192 Identities=14% Similarity=0.109 Sum_probs=133.3
Q ss_pred HHHHHHHHc-CCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecc
Q 018231 97 CQKRALEAF-RLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (359)
Q Consensus 97 ~~~~~a~~~-g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (359)
+++.+++++ +++++ +|++|+|++ ++..++.++++|||+|+++.+.|.++.. .+...|.+++.++++
T Consensus 68 l~~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~ 135 (375)
T 3op7_A 68 FKKSVSQLYTGVKPE----QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLGAEVDLWQIE 135 (375)
T ss_dssp HHHHHHTTSSSCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTTCEEEEEEEE
T ss_pred HHHHHHHHhccCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEecc
Confidence 337777777 45654 499999988 8888999999999999999977765432 334456666666543
Q ss_pred cCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCCC-CCCCC
Q 018231 175 LNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEY 248 (359)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~-~~~~~ 248 (359)
.+ +++.+|+++|++++++ ++++|+++ ++| +|...| +++|.++|++||+++|+|++|+..... .... ....+
T Consensus 136 ~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-~~~~~~~~~~ 212 (375)
T 3op7_A 136 EE-NGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-DVPSIIEVYD 212 (375)
T ss_dssp GG-GTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-CCCCHHHHCT
T ss_pred cc-CCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-CCCchhhhcC
Confidence 32 4567899999999987 89999987 777 887777 999999999999999999998754332 1100 00013
Q ss_pred ceEEEeCCCCcCC--CCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 249 ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 249 ~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
.++++.|++|+++ |.+.|++++++ ++.+.+....... ..+++....+++.++++.
T Consensus 213 ~~i~~~s~sK~~~~~G~r~G~v~~~~--------------~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 269 (375)
T 3op7_A 213 KGIAVNSLSKTYSLPGIRIGWVAANH--------------QVTDILRDYRDYT-MICAGVFDDLVAQLALAH 269 (375)
T ss_dssp TEEEEEESSSSSSCGGGCCEEEECCH--------------HHHHHHTTTGGGT-TSCCCHHHHHHHHHHHHT
T ss_pred CEEEEeEChhhcCCcccceEEEEeCH--------------HHHHHHHHHHhhh-ccCCCcHHHHHHHHHHhc
Confidence 5688999999885 33349988865 5555554332211 234455555555566654
No 131
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.80 E-value=1.1e-18 Score=168.11 Aligned_cols=260 Identities=11% Similarity=0.074 Sum_probs=165.0
Q ss_pred cchhccccccccChHHHHHHHHHHHHh-hcCceeeCCCCCC--cHH--H-------------HHHHHhhhhccCCCCCCC
Q 018231 19 WPKQLNAPLEVVDPEIADIIEHEKARQ-WKGLELIPSENFT--SVS--V-------------MQAVGSVMTNKYSEGYPG 80 (359)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~--~~~--v-------------~~al~~~~~~~~~~g~~~ 80 (359)
|...++++++.+.+..+..+.+..... .+.|+|..|.... .|. . .++....+ +
T Consensus 3 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~--- 73 (425)
T 2r2n_A 3 YARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRAL------Q--- 73 (425)
T ss_dssp GGGGSCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHHHT------S---
T ss_pred hhHHHHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhhhc------C---
Confidence 444566666667666666665544432 4678888765421 110 0 01111111 1
Q ss_pred CcccCCchhHHHHHHHHHHHHHHHcCCCCC-------CCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCc
Q 018231 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPE-------KWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSH 152 (359)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~-------~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~ 152 (359)
|+...+..++++++.+++++.+|.+.. . .+|++|+|++ ++..++.++++|||+|++.++.|.++
T Consensus 74 ---Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--- 145 (425)
T 2r2n_A 74 ---YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQ--MDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGT--- 145 (425)
T ss_dssp ---CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTC--EEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHH---
T ss_pred ---CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCc--CcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHH---
Confidence 222244467777888999888898641 1 2599999999 88889999999999999999655543
Q ss_pred cccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh-----------hCCcEEEEc--CCC-CCChhh---HHHH
Q 018231 153 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----------FRPKLIVAG--ASA-YARLYD---YERI 215 (359)
Q Consensus 153 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-----------~~~k~v~l~--~~n-~g~~~~---l~~i 215 (359)
...+...|.++..++ .+ ++ .+|+++|++.++. .++++|++. ++| ||.+.+ +++|
T Consensus 146 -----~~~~~~~g~~~~~v~--~~-~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l 216 (425)
T 2r2n_A 146 -----LQSLHPLGCNIINVA--SD-ES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI 216 (425)
T ss_dssp -----HHHHGGGTCEEEEEC--EE-TT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred -----HHHHHHcCCEEEEeC--cC-CC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence 334455676665555 44 22 4899999999872 268888763 677 887665 5589
Q ss_pred HHHHHHcCCEEEEecccccccccc----CCCCCCCCCceEEEeCCCCcCC-CCCceEEEEeCCcchhccCCcchhhhHHH
Q 018231 216 RKVCNKQKAIMLADMAHISGLVAA----GVIPSPFEYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGKEVFYDYEE 290 (359)
Q Consensus 216 ~~la~~~~~~vivD~a~~~g~~~~----~~~~~~~~~~D~v~~s~~K~l~-gp~gG~l~~~~~~~~~~~~g~~~~~~~~~ 290 (359)
.++|++||+++|+|++|+...... .+......+.++++.|++|+++ |.+.|++++++ ++.+
T Consensus 217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~--------------~l~~ 282 (425)
T 2r2n_A 217 YELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK--------------PLIE 282 (425)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH--------------HHHH
T ss_pred HHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH--------------HHHH
Confidence 999999999999999997432211 1111111135689999999985 12239999987 4444
Q ss_pred hhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018231 291 KINQAVFPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 291 ~~~~~~~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
.+..... ....+++.+...++.++|+.+
T Consensus 283 ~l~~~~~-~~~~~~~~~~q~a~~~~l~~~ 310 (425)
T 2r2n_A 283 RVILHIQ-VSTLHPSTFNQLMISQLLHEW 310 (425)
T ss_dssp HHHHHHH-TTTCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhcCCCCHHHHHHHHHHHHhc
Confidence 4332211 122456777777777777654
No 132
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.80 E-value=5.1e-19 Score=173.35 Aligned_cols=199 Identities=11% Similarity=0.015 Sum_probs=140.4
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCc------eeEEECCChH-HHHHHH
Q 018231 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG------VNVQSLSGSP-SNFQVY 129 (359)
Q Consensus 57 ~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~------~~v~~tsG~~-a~~~~~ 129 (359)
.+|..+.+.+...+.... ..|.......++|+.+.+++++++|.+...+. ...++|+|++ +++.++
T Consensus 90 ~~~~~~~~~~~~~~n~~~-------~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al 162 (481)
T 4e1o_A 90 SWPSLLGDMLADAINCLG-------FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIAL 162 (481)
T ss_dssp CHHHHHHHHHHHHHCCCC-------SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCccc-------CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHH
Confidence 334555555665554311 11233466788999999999999998643100 1367777777 877666
Q ss_pred Hhhc-------------------CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHH
Q 018231 130 TALL-------------------KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKS 190 (359)
Q Consensus 130 ~al~-------------------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~ 190 (359)
.+.. .+++.|+++...|.++.. .+.+.|.+++.++ .+ +++.+|+++|+++
T Consensus 163 ~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~Le~~ 231 (481)
T 4e1o_A 163 LAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEK--------AGLISLVKMKFLP--VD-DNFSLRGEALQKA 231 (481)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHH--------HHHHHTCEEEEEC--CC-TTSCCCHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHH--------HHHhCCCceEEEE--cC-CCCcCCHHHHHHH
Confidence 5542 267899999988876543 3335566666665 45 6789999999999
Q ss_pred hhhhC-----CcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCC---CCCCCceEEEeCCCCcC
Q 018231 191 ATLFR-----PKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSL 260 (359)
Q Consensus 191 i~~~~-----~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l 260 (359)
+++.+ +.+|+++ +++ +|.+.|+++|+++|++||+++++|+||+.+....+... .++..+|++++++||||
T Consensus 232 i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l 311 (481)
T 4e1o_A 232 IEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWM 311 (481)
T ss_dssp HHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHS
T ss_pred HHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhc
Confidence 97632 5566665 555 89999999999999999999999999987755332111 12224699999999999
Q ss_pred CCCCc-eEEEEeCC
Q 018231 261 RGPRG-AMIFFRKG 273 (359)
Q Consensus 261 ~gp~g-G~l~~~~~ 273 (359)
++|.| |+++++++
T Consensus 312 ~~p~g~g~l~~~~~ 325 (481)
T 4e1o_A 312 MVHFDCTGFWVKDK 325 (481)
T ss_dssp SCCSSCEEEEESBH
T ss_pred CCCCceEEEEEeCH
Confidence 99999 89999875
No 133
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.80 E-value=2.3e-19 Score=166.84 Aligned_cols=188 Identities=12% Similarity=0.083 Sum_probs=134.5
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|++ + .+++++|+.++..++.+++++||+|++++++|+++....... ....|.++..++ .
T Consensus 3 l~~~la~~~g~~-~----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~--~- 70 (331)
T 1pff_A 3 LEGKIAKLEHAE-A----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQ----LRKFGVEVDFID--M- 70 (331)
T ss_dssp HHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTH----HHHTTCEEEEEC--T-
T ss_pred HHHHHHHHhCCC-e----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHH----HHhcCCEEEEeC--C-
Confidence 558899999986 2 588888855888788888999999999998887664332110 112354454443 2
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHH-cCCEEEEeccccccccccCCCCCCCCCceEEE
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~-~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (359)
.|++++++.+++ ++++|+++ ++| +|...|+++|.++|++ +|+++|+|++|+.|....+. .. ++|+++
T Consensus 71 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~d~~~ 140 (331)
T 1pff_A 71 -----AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DL---GVDIVV 140 (331)
T ss_dssp -----TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GG---TCSEEE
T ss_pred -----CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hc---CCcEEE
Confidence 378999999887 89999887 777 8999999999999999 99999999999988764333 22 389999
Q ss_pred eCCCCcCCCCC---ceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018231 254 TTTHKSLRGPR---GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
+|+||+|++|. +|+++++++ ++.+.+......+..++++....+++..+++.+
T Consensus 141 ~s~~K~~~~~~~r~~G~~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 196 (331)
T 1pff_A 141 HSATKYINGHTDVVAGLVCSRAD-------------IIAKVKSQGIKDITGAIISPHDAWLITRGTLTL 196 (331)
T ss_dssp EETTTTTSSSSSCCCEEEEECHH-------------HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred EECccccCCCCCceEEEEEeCcH-------------HHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchH
Confidence 99999998765 588888872 344444433222022455655555555556543
No 134
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.79 E-value=2.7e-19 Score=175.49 Aligned_cols=197 Identities=10% Similarity=0.073 Sum_probs=139.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCC-----ceeEEECCChH-HHHHHHHh
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKW-----GVNVQSLSGSP-SNFQVYTA 131 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~-----~~~v~~tsG~~-a~~~~~~a 131 (359)
++..+.+++..++.. .. ..|.......++|+.+++++++++|++.+.. ...+++|+|++ ++..++.+
T Consensus 86 ~~~~~~~~~~~~~n~-~~------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~ 158 (486)
T 1js3_A 86 YPAMLADMLCGAIGC-IG------FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLA 158 (486)
T ss_dssp HHHHHHHHHHHHHCC-CC------SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-Cc------cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHH
Confidence 345566777766533 11 1122235578889889999999999974200 01478888888 87767665
Q ss_pred hcCC---------CC--------e--eeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhh
Q 018231 132 LLKP---------HD--------R--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (359)
Q Consensus 132 l~~~---------Gd--------~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (359)
...+ || + |+++++.|.++.. .+...|.+++.++ .+ +++.+|+++|+++++
T Consensus 159 ~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~--------~~~~~G~~v~~v~--~d-~~~~~d~~~L~~~i~ 227 (486)
T 1js3_A 159 ARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER--------AGLIGGVKLKAIP--SD-GKFAMRASALQEALE 227 (486)
T ss_dssp HHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH--------HHHHHTCEEEEEC--CC-TTSCCCHHHHHHHHH
T ss_pred HHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHH--------HHHhCCCceEEee--cC-CCCCCCHHHHHHHHH
Confidence 5321 43 4 6778877765432 4455677776665 45 578999999999998
Q ss_pred hhCCc------EEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccC-CCC--CCCCCceEEEeCCCCcCC
Q 018231 193 LFRPK------LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP--SPFEYADVVTTTTHKSLR 261 (359)
Q Consensus 193 ~~~~k------~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~-~~~--~~~~~~D~v~~s~~K~l~ 261 (359)
+ +++ +|+++ ++| +|.+.|+++|+++|++||+++++|++|+.+.+..+ ... .++.++|++++++||+++
T Consensus 228 ~-~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~ 306 (486)
T 1js3_A 228 R-DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLL 306 (486)
T ss_dssp H-HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSS
T ss_pred H-HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcC
Confidence 6 453 66666 766 89999999999999999999999999987765432 211 122358999999999998
Q ss_pred CCCc-eEEEEeCC
Q 018231 262 GPRG-AMIFFRKG 273 (359)
Q Consensus 262 gp~g-G~l~~~~~ 273 (359)
+|.+ |+++++++
T Consensus 307 ~p~~~G~l~~~~~ 319 (486)
T 1js3_A 307 VNFDCSAMWVKRR 319 (486)
T ss_dssp CCSSCEEEEESCH
T ss_pred CCcceEEEEEeCH
Confidence 8877 99999875
No 135
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.79 E-value=5.9e-19 Score=167.77 Aligned_cols=190 Identities=13% Similarity=0.097 Sum_probs=140.7
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
+.|+|.. +..|+.+++++.+.+.+.+ + +. .....+ +++.+++++|.+. +++++|++ ++
T Consensus 9 ~~i~~~~--p~~~~~~~~a~~~~~~~~~---~-----~~-~~~~~~----l~~~la~~~~~~~------~~~~~~gt~al 67 (393)
T 1mdo_A 9 DFLPFSR--PAMGAEELAAVKTVLDSGW---I-----TT-GPKNQE----LEAAFCRLTGNQY------AVAVSSATAGM 67 (393)
T ss_dssp CCBCSCC--CCCCHHHHHHHHHHHHHTC---C-----SS-SHHHHH----HHHHHHHHHCCSE------EEEESCHHHHH
T ss_pred cccccCC--CCCCHHHHHHHHHHHhcCC---c-----CC-ChHHHH----HHHHHHHHhCCCc------EEEecChHHHH
Confidence 3567755 3356888999988886532 1 11 133444 5578888888752 77777777 88
Q ss_pred HHHHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 018231 126 FQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (359)
Q Consensus 126 ~~~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~ 204 (359)
..++.++ +++||+|++++++|+++.. .+...|.+++.++ .+++++.+|+++|++.+++ ++++|++++
T Consensus 68 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~~~~- 135 (393)
T 1mdo_A 68 HIALMALGIGEGDEVITPSMTWVSTLN--------MIVLLGANPVMVD--VDRDTLMVTPEHIEAAITP-QTKAIIPVH- 135 (393)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTCEEEEEC--BCTTTCCBCHHHHHHHCCT-TEEEECCBC-
T ss_pred HHHHHHcCCCCCCEEEeCCCccHhHHH--------HHHHCCCEEEEEe--ccCCcCCCCHHHHHHhcCC-CceEEEEeC-
Confidence 8899999 9999999999977776533 2334566665554 5544578999999999987 788888763
Q ss_pred CCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCC--CcCCCCCceEEEEeC
Q 018231 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRK 272 (359)
Q Consensus 205 n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp~gG~l~~~~ 272 (359)
.+|...++++|.++|+++|+++|+|++|+.|....+ ...+. .|++++|+| |+++++.+|++++++
T Consensus 136 ~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~~--~d~~~~S~~k~K~l~~~~~g~~~~~~ 202 (393)
T 1mdo_A 136 YAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKG-RHIGA--RGTAIFSFHAIKNITCAEGGIVVTDN 202 (393)
T ss_dssp GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETT-EETTS--SSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred CCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECC-eecCC--CCeEEEeCCCCCccccccceEEEeCC
Confidence 378888999999999999999999999987765432 11111 699999999 999887779998864
No 136
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.79 E-value=4e-19 Score=170.26 Aligned_cols=185 Identities=15% Similarity=0.127 Sum_probs=132.3
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++++.|+++..++.. .+...|.+++.++ .+
T Consensus 67 l~~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v~--~~ 135 (404)
T 1e5e_A 67 LEGKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEH----ALTKFGIQVDFIN--TA 135 (404)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCEEEEEC--TT
T ss_pred HHHHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH----HHHHcCCEEEEEC--CC
Confidence 5588888888852 36666665588878889999999999999888765442211 1233465555453 33
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHH-cCCEEEEeccccccccccCCCCCCCCCceEEE
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~-~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (359)
|++++++.+++ ++++|+++ ++| +|.+.|+++|.++|++ +|+++|+|++|+.+...... .. ++|+++
T Consensus 136 ------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~~---~~di~~ 204 (404)
T 1e5e_A 136 ------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-DF---GVDVVV 204 (404)
T ss_dssp ------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-GG---TCSEEE
T ss_pred ------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-cc---CCEEEE
Confidence 78999999987 89999998 878 8999999999999999 99999999999876642111 12 489999
Q ss_pred eCCCCcCCCCC---ceEEEEeCCcchhccCCcchhhhHHH-hhccccCCCC-CCCCcHHHHHHHHHHHHH
Q 018231 254 TTTHKSLRGPR---GAMIFFRKGVKEINKQGKEVFYDYEE-KINQAVFPGL-QGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~-~gt~~~~~i~al~~Al~~ 318 (359)
.|++|+|++|. +|++++++ ++.+ .+.... ... .++++.+...+..++++.
T Consensus 205 ~S~sK~~~~~g~ri~G~~~~~~--------------~~~~~~l~~~~-~~~~g~~~~~~~~~~~~~~l~~ 259 (404)
T 1e5e_A 205 HSATKYINGHTDVVAGLICGKA--------------DLLQQIRMVGI-KDITGSVISPHDAWLITRGLST 259 (404)
T ss_dssp EETTTTTTCSSCCCCEEEEECH--------------HHHHHHHHTCC-CCCCCCCCCHHHHHHHHHHHTT
T ss_pred EcCccccCCCCCCeEEEEEECH--------------HHHHHHHHHHH-HhCCCCCCCHHHHHHHHHhHhH
Confidence 99999998775 48888887 4433 444332 222 234555555555566654
No 137
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.79 E-value=2.9e-19 Score=170.87 Aligned_cols=155 Identities=16% Similarity=0.179 Sum_probs=120.6
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|+++....... ....|.++..++ .+
T Consensus 70 l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~~~--~~ 138 (398)
T 1gc0_A 70 LEARMASLEGGEA-----GLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHG----IGEFGVKLRHVD--MA 138 (398)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHT----GGGGTCEEEEEC--TT
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHH----HHHcCCEEEEEC--CC
Confidence 5588899999862 488888866888889999999999999998888765432111 123354454443 22
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEe
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (359)
|++++++.+++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+...... .. ++|++++
T Consensus 139 ------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-~~---~~d~~~~ 207 (398)
T 1gc0_A 139 ------DLQALEAAMTP-ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL-EL---GADLVVH 207 (398)
T ss_dssp ------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG-GG---TCSEEEE
T ss_pred ------CHHHHHHhcCC-CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CceEEEE
Confidence 89999999987 89999988 777 898999999999999999999999999877654322 12 4899999
Q ss_pred CCCCcCCCCC---ceEEEEeCC
Q 018231 255 TTHKSLRGPR---GAMIFFRKG 273 (359)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~ 273 (359)
|+||++++|. ||+++++++
T Consensus 208 S~sK~~~~~~~~~~G~l~~~~~ 229 (398)
T 1gc0_A 208 SATKYLSGHGDITAGIVVGSQA 229 (398)
T ss_dssp ETTTTTTCSSSCCCEEEEECHH
T ss_pred CCccccCCCCCCeEEEEEEChH
Confidence 9999998776 588888763
No 138
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.79 E-value=4.9e-19 Score=165.70 Aligned_cols=200 Identities=17% Similarity=0.193 Sum_probs=136.3
Q ss_pred cCceeeCCC-CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-H
Q 018231 47 KGLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (359)
Q Consensus 47 ~~i~l~~~~-~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a 124 (359)
..|+|..+. ..+++.+++++.+.+.. +. ..|+... ..+.+++++++++| .+ . +|++++|++ +
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~~~~~-~~------~~~~~~~----~~~~l~~~la~~~g-~~-~---~v~~~~~gt~a 71 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVKHSSG-QA------GPYGTDE----LTAQVKRKFCEIFE-RD-V---EVFLVPTGTAA 71 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHHTTSS-CC------CSTTCSH----HHHHHHHHHHHHHT-SC-C---EEEEESCHHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHhhccC-cc------cccccch----HHHHHHHHHHHHhC-CC-C---cEEEeCCccHH
Confidence 456776543 24689999999887532 11 1122222 23346688999999 33 2 588888888 8
Q ss_pred HHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeee--eeeeEEEecccCCCCCCCCHHHHHH-Hhhhh------C
Q 018231 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEK-SATLF------R 195 (359)
Q Consensus 125 ~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~e~l~~-~i~~~------~ 195 (359)
+..++.++++|||+|+++++.|.+.+... .+... |.+++.++ .+ ++.+|+++|++ .+++. +
T Consensus 72 ~~~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~~~~~v~--~~--~~~~d~~~l~~~~i~~~~~~~~~~ 141 (356)
T 1v72_A 72 NALCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGAKLMTVD--GP--AAKLDIVRLRERTREKVGDVHTTQ 141 (356)
T ss_dssp HHHHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSCEEEECC--CG--GGCCCHHHHHHHTTSSTTCTTSCE
T ss_pred HHHHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCcEEEEec--CC--CCeEcHHHHHHHhhhcchhhccCC
Confidence 88888998999999999987666543320 12233 55554444 33 36789999999 88752 5
Q ss_pred CcEEEEc-CCCCCC---hhhHHHHHHHHHHcCCEEEEecccccccc-ccCCCCCCC---CCceEEEeCCCCcCCCCCc-e
Q 018231 196 PKLIVAG-ASAYAR---LYDYERIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPF---EYADVVTTTTHKSLRGPRG-A 266 (359)
Q Consensus 196 ~k~v~l~-~~n~g~---~~~l~~i~~la~~~~~~vivD~a~~~g~~-~~~~~~~~~---~~~D~v~~s~~K~l~gp~g-G 266 (359)
+++|+++ ++|+|. ..++++|.++|++||+++|+|++|+.+.. ..+.....+ .++|++++|+||+ ++|.| |
T Consensus 142 ~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g 220 (356)
T 1v72_A 142 PACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEA 220 (356)
T ss_dssp EEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEE
T ss_pred ceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccE
Confidence 7888888 666887 67789999999999999999999875422 111111111 1489999999998 67777 6
Q ss_pred EEEEeCC
Q 018231 267 MIFFRKG 273 (359)
Q Consensus 267 ~l~~~~~ 273 (359)
+++++++
T Consensus 221 ~~~~~~~ 227 (356)
T 1v72_A 221 IVLFNTS 227 (356)
T ss_dssp EEESSGG
T ss_pred EEEECHH
Confidence 8877663
No 139
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.79 E-value=4.1e-19 Score=167.74 Aligned_cols=191 Identities=10% Similarity=0.044 Sum_probs=139.0
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
..+++..+.+..++ +++++.+.+.... |.......+ +++.+++++|.+. +++++|++ ++
T Consensus 7 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~----l~~~la~~~~~~~------~~~~~~gt~a~ 66 (374)
T 3uwc_A 7 PYSYLERQFADIEP-YLNDLREFIKTAD---------FTLGAELEK----FEKRFAALHNAPH------AIGVGTGTDAL 66 (374)
T ss_dssp CSCCHHHHTSSCHH-HHHHHHHHHHHTC---------CSSCHHHHH----HHHHHHHHTTCSE------EEEESCHHHHH
T ss_pred eeeccccCCCCchH-HHHHHHHHHHcCC---------cccChhHHH----HHHHHHHHhCCCc------EEEeCCHHHHH
Confidence 34666667777777 9999888776521 122234444 4588899999863 45555555 88
Q ss_pred HHHHHhh-cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 018231 126 FQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (359)
Q Consensus 126 ~~~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~ 204 (359)
..++.++ +++||+|+++.++|+++.. .+...|.+++.++ .+ +++.+|++++++.+++ ++++|+ ++
T Consensus 67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~~~~-~~~~v~--~~ 132 (374)
T 3uwc_A 67 AMSFKMLNIGAGDEVITCANTFIASVG--------AIVQAGATPVLVD--SE-NGYVIDPEKIEAAITD-KTKAIM--PV 132 (374)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTCEEEEEC--BC-TTSSBCGGGTGGGCCT-TEEEEC--CB
T ss_pred HHHHHHcCCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEe--cC-CCCCcCHHHHHHhCCC-CceEEE--Ee
Confidence 8899999 9999999999977766533 3344566665554 55 5688999999999987 788777 56
Q ss_pred C-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCC--CcCCC-CCceEEEEeCC
Q 018231 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRG-PRGAMIFFRKG 273 (359)
Q Consensus 205 n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~g-p~gG~l~~~~~ 273 (359)
| +|...++++|.++|+++|+++|+|++|+.|.... ....+ ...|++++|+| |++++ +.||+++++++
T Consensus 133 n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~-~~~~~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~ 203 (374)
T 3uwc_A 133 HYTGNIADMPALAKIAKKHNLHIVEDACQTILGRIN-DKFVG-SWGQFACFSLHPLKNLNVWSDAGVIITHSD 203 (374)
T ss_dssp CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET-TEETT-SSSSEEEEECSSSSSSCCSSCCEEEEESCH
T ss_pred CCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeC-Ceecc-ccccEEEEeCCCCCcCCccceeEEEEeCCH
Confidence 6 8988999999999999999999999998876532 11111 12599999977 99977 45688888764
No 140
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.79 E-value=1.1e-18 Score=168.25 Aligned_cols=213 Identities=12% Similarity=0.053 Sum_probs=134.3
Q ss_pred cCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-
Q 018231 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (359)
Q Consensus 47 ~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~- 123 (359)
+.|+|..++. ++++.|++++.+.+.. +..+ .+...|+......++++++.+++.+.++++++ +|++|+|++
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~-~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~----~i~~t~G~~~ 130 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAKKAHE-LSTI-EGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDD----DVFVSDGAKC 130 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHHHH-TTST-TTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGG----GEEEESCHHH
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhc-cccc-CCccCCCCCCCCHHHHHHHHHHHHccCCCCcc----eEEECCChHH
Confidence 5688987765 4789999999998774 2110 11112333345567776666766655577664 499999999
Q ss_pred HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccce-e---eeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 018231 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI-S---AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (359)
Q Consensus 124 a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v 199 (359)
++. ++.++++|||+|+++++.|+++..........+. . ....++..+++..+ +++..|+++ .+ ++++|
T Consensus 131 al~-~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~-----~~-~~~~v 202 (432)
T 3ei9_A 131 DIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPE-NGFFPDLST-----VG-RTDII 202 (432)
T ss_dssp HHH-HHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGG-GTTSCCGGG-----CC-CCSEE
T ss_pred HHH-HHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcc-cCCcCChhh-----CC-CCCEE
Confidence 655 5688899999999999888765432110000000 0 00013444543222 234556443 23 78999
Q ss_pred EEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccccC---CCCCC-CCCceEEEeCCCCcCC--CCCceEE
Q 018231 200 VAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG---VIPSP-FEYADVVTTTTHKSLR--GPRGAMI 268 (359)
Q Consensus 200 ~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~~---~~~~~-~~~~D~v~~s~~K~l~--gp~gG~l 268 (359)
+++ |+| +|.+. ++++|+++|++||+++|+|++|+....... +.... ..+.++++.|++|+|+ |.+.|++
T Consensus 203 ~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~ 282 (432)
T 3ei9_A 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWT 282 (432)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEE
Confidence 887 888 88655 577788889999999999999975433211 11111 1135799999999874 3334999
Q ss_pred EEeCC
Q 018231 269 FFRKG 273 (359)
Q Consensus 269 ~~~~~ 273 (359)
+++++
T Consensus 283 ~~~~~ 287 (432)
T 3ei9_A 283 VIPKK 287 (432)
T ss_dssp ECCTT
T ss_pred EEChH
Confidence 99885
No 141
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.79 E-value=1.1e-18 Score=171.65 Aligned_cols=197 Identities=16% Similarity=0.083 Sum_probs=141.0
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhh---
Q 018231 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--- 132 (359)
Q Consensus 57 ~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al--- 132 (359)
+.++.+++++.....+.. ...+.......++|+.+++++++++|+++.. .+++|+|++ ++..++.+.
T Consensus 111 ~~~~~v~~~~~~~~~n~~------~~~~~~~~~~~~le~~~~~~la~~~g~~~~~---~~~~t~ggt~a~~~al~~ar~~ 181 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQS------MDSWDQASSATYVEQKVVNWLCDKYDLSEKA---DGIFTSGGTQSNQMGLMLARDW 181 (497)
T ss_dssp CBHHHHHHHHHHHHHCCC------TTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC---EEEEESSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhhccc------ccchhhChHHHHHHHHHHHHHHHHhCCCCCC---CeEEcCCchHHHHHHHHHHHHH
Confidence 457777777766544311 1112333457788888999999999996533 589999988 877666662
Q ss_pred -c---------CC------CC-eeeecCCCCCcccCccccccccceeeeee---eeEEEecccCCCCCCCCHHHHHHHhh
Q 018231 133 -L---------KP------HD-RIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSAT 192 (359)
Q Consensus 133 -~---------~~------Gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (359)
+ ++ || .|+++...|.++.... ...|. +++.++ .+ +++.+|+++|++.++
T Consensus 182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~--------~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~ 250 (497)
T 2qma_A 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSA--------SWMGLGEKAVMTVD--AN-ADGTMDITKLDEVIA 250 (497)
T ss_dssp HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHH--------HHTTSCGGGEEEEC--BC-TTSSBCGGGHHHHHH
T ss_pred HHHhhcccchhhcccccccCCeEEEECCCchHHHHHHH--------HHcCCCcccEEEEe--cC-CCCcCCHHHHHHHHH
Confidence 3 13 46 7888887777654322 22222 455565 45 568999999999997
Q ss_pred hh---CCc--EEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCC--CCCCCCceEEEeCCCCcCCCC
Q 018231 193 LF---RPK--LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI--PSPFEYADVVTTTTHKSLRGP 263 (359)
Q Consensus 193 ~~---~~k--~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~--~~~~~~~D~v~~s~~K~l~gp 263 (359)
+. +++ +|+++ ++| +|.+.|+++|+++|++||+++|+|++|+.+..+.+.. ..++..+|++++|+|||+++|
T Consensus 251 ~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p 330 (497)
T 2qma_A 251 QAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT 330 (497)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC
T ss_pred HHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC
Confidence 63 244 66666 666 8999999999999999999999999998887765421 011225899999999999998
Q ss_pred Cc-eEEEEeCC
Q 018231 264 RG-AMIFFRKG 273 (359)
Q Consensus 264 ~g-G~l~~~~~ 273 (359)
.+ |+++++++
T Consensus 331 ~~~G~l~~~~~ 341 (497)
T 2qma_A 331 ISCGALLVNDK 341 (497)
T ss_dssp SSCEEEEESCG
T ss_pred cceEEEEEeCH
Confidence 87 99999875
No 142
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.79 E-value=2.5e-18 Score=161.39 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=149.9
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
++.|+|..++++ +++.+++++.+.+.+.. +|+. ....+ ++++++++++++++ +|++|+|++
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~----l~~~la~~~~~~~~----~i~~~~g~t 88 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNLG--VYPD-------VNYRR----LNKSIENYLKLKDI----GIVLGNGAS 88 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGGG--SCCC-------TTCHH----HHHHHHHHHTCCSC----EEEEESSHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHhc--CCCC-------ccHHH----HHHHHHHHhCCCcc----eEEEcCCHH
Confidence 357899888775 57999999988876522 3322 12233 55888888898765 499999999
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
++..++.++ |+|+++.+.|.++.. .+...|.++..++ .+ +++.+|++++++.+++ +++++++
T Consensus 89 ~al~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~l~~--~~~v~i~ 151 (361)
T 3ftb_A 89 EIIELSISLF----EKILIIVPSYAEYEI--------NAKKHGVSVVFSY--LD-ENMCIDYEDIISKIDD--VDSVIIG 151 (361)
T ss_dssp HHHHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CC-TTSCCCHHHHHHHTTT--CSEEEEE
T ss_pred HHHHHHHHHc----CcEEEecCChHHHHH--------HHHHcCCeEEEee--cC-cccCCCHHHHHHhccC--CCEEEEe
Confidence 887677666 999999966655422 3444566665565 44 3456788999999976 8998887
Q ss_pred -CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccc--cCCCC-CCCCCceEEEeCCCCcCC--CCCceEEEEeC
Q 018231 203 -ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVA--AGVIP-SPFEYADVVTTTTHKSLR--GPRGAMIFFRK 272 (359)
Q Consensus 203 -~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~--~~~~~-~~~~~~D~v~~s~~K~l~--gp~gG~l~~~~ 272 (359)
++| +|.+. ++++|+++|++||+++|+|++|+..... ..... ....+.+++++|++|+++ |.+.|++++.+
T Consensus 152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~ 231 (361)
T 3ftb_A 152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231 (361)
T ss_dssp TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC
Confidence 877 88665 4777888889999999999999754442 11000 011124588999999874 22338888444
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 273 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
+ ++.+.+..... ..+++.+..+++.++++
T Consensus 232 ~-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~l~ 260 (361)
T 3ftb_A 232 K-------------EIAAKIKAKQN---PWNINCFAEMAAINCLK 260 (361)
T ss_dssp H-------------HHHHHHHTTSC---TTCSCHHHHHHHHHTSS
T ss_pred H-------------HHHHHHHhhCC---CCCCCHHHHHHHHHHhc
Confidence 3 55555543321 24777787777777765
No 143
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=1.7e-19 Score=182.52 Aligned_cols=195 Identities=17% Similarity=0.097 Sum_probs=140.6
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (359)
+++.++++||++. .+++++|++ +|.+++.++++|||+|+++.+.|.++.. ++.+.|+.++.++...
T Consensus 200 aE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa~pv~v~~~~ 266 (715)
T 3n75_A 200 AEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDVTPIYFRPTR 266 (715)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCCEEEEECCCB
T ss_pred HHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEeccc
Confidence 5588999999975 488899987 9988999999999999999988887654 4456677666665332
Q ss_pred CCCCCC----C-----CHHHHHHHhhhh-CCc---EEEEcCCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCC
Q 018231 176 NESTGY----I-----DYDQLEKSATLF-RPK---LIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (359)
Q Consensus 176 ~~~~~~----~-----d~e~l~~~i~~~-~~k---~v~l~~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~ 241 (359)
+.+. + |+++|++++++. ++| +++++.+| +|.+.|+++|.++|++++ +++|+||+.+....+.
T Consensus 267 --~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~ 342 (715)
T 3n75_A 267 --NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (715)
T ss_dssp --CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGG
T ss_pred --cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCc
Confidence 2333 3 899999999862 334 77777336 899999999999998764 7999999877522111
Q ss_pred -C-CCCCC---CceEE---EeCCCCcCCCCC-ceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHH
Q 018231 242 -I-PSPFE---YADVV---TTTTHKSLRGPR-GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGL 312 (359)
Q Consensus 242 -~-~~~~~---~~D~v---~~s~~K~l~gp~-gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al 312 (359)
. ...+. ++|++ ++|+||+++|+. ||+++++++.. ..+++........++|+++.++|+
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-------------~~~~~~~~~~~~STSpsy~~~Asl 409 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-------------EETFNEAYMMHTTTSPHYGIVAST 409 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-------------HHHHHHHHHHTSCSSCCHHHHHHH
T ss_pred cccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-------------HHHHHHHHHhhcCCCchHHHHHHH
Confidence 1 12221 25765 999999999984 58998987521 122222211123478999999999
Q ss_pred HHHHHHHhc
Q 018231 313 AVALKQVCT 321 (359)
Q Consensus 313 ~~Al~~~~~ 321 (359)
.+|++++.+
T Consensus 410 daA~~~~~~ 418 (715)
T 3n75_A 410 ETAAAMMKG 418 (715)
T ss_dssp HHHHHHHSH
T ss_pred HHHHHHHHh
Confidence 999998874
No 144
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.78 E-value=2.7e-18 Score=165.82 Aligned_cols=212 Identities=11% Similarity=0.016 Sum_probs=139.4
Q ss_pred CceeeCCCCCC-cHHHHHHHHhhhhccC--CCCCCC---CcccCCchhHHHHHHHHHHHHHHHcC----CCCCCCceeEE
Q 018231 48 GLELIPSENFT-SVSVMQAVGSVMTNKY--SEGYPG---ARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQ 117 (359)
Q Consensus 48 ~i~l~~~~~~~-~~~v~~al~~~~~~~~--~~g~~~---~~~~~~~~~~~~l~~~~~~~~a~~~g----~~~~~~~~~v~ 117 (359)
.|+|..++++. .+.+.+++.+...... .+|... ...|+...+..++++++.+++.+..+ ++++ +|+
T Consensus 40 ~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~----~v~ 115 (435)
T 3piu_A 40 IIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN----HLV 115 (435)
T ss_dssp BEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG----GEE
T ss_pred eEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH----HEE
Confidence 57888888875 4555555555332110 001000 02244445567777666677665554 4454 499
Q ss_pred ECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCcccccccccee-eeeeeeEEEecccCCCCCCCCHHHHHHHhhhh-
Q 018231 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNESTGYIDYDQLEKSATLF- 194 (359)
Q Consensus 118 ~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~- 194 (359)
+|+|++ ++..++.+++++||.|++..+.|.++.. .+. ..|.++..+++..+ .++.+|+++|++.+++.
T Consensus 116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~ 186 (435)
T 3piu_A 116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGVEIVPIHCTSS-NGFQITETALEEAYQEAE 186 (435)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCCEEEEEECCGG-GTSCCCHHHHHHHHHHHH
T ss_pred EcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCCEEEEeeCCCc-cCCcCCHHHHHHHHHHHH
Confidence 999999 9988999999999999999977765532 222 34666655654322 34678999999998752
Q ss_pred ----CCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccccCCCCCCC---------------CCce
Q 018231 195 ----RPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---------------EYAD 250 (359)
Q Consensus 195 ----~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~---------------~~~D 250 (359)
++++|+++ ++| +|.+. ++++|.++|++||+++|+|++|+.+...... .... ....
T Consensus 187 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~ 265 (435)
T 3piu_A 187 KRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS-FISVMEVLKDRNCDENSEVWQRV 265 (435)
T ss_dssp HTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSC-CCCHHHHHHC-------CGGGGE
T ss_pred hcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC-CcCHHHhccccccccccCCCCCE
Confidence 68888887 877 88654 4688889999999999999999765443211 0010 1123
Q ss_pred EEEeCCCCcCC--CCCceEEEEeCC
Q 018231 251 VVTTTTHKSLR--GPRGAMIFFRKG 273 (359)
Q Consensus 251 ~v~~s~~K~l~--gp~gG~l~~~~~ 273 (359)
+++.|++|+|+ |.+.|+++++++
T Consensus 266 i~i~s~sK~~g~~G~r~G~~~~~~~ 290 (435)
T 3piu_A 266 HVVYSLSKDLGLPGFRVGAIYSNDD 290 (435)
T ss_dssp EEEEESSSSSCCGGGCEEEEEESCH
T ss_pred EEEEeeecccCCCceeEEEEEeCCH
Confidence 88999999884 333499998653
No 145
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.78 E-value=3.7e-19 Score=174.08 Aligned_cols=175 Identities=12% Similarity=-0.017 Sum_probs=129.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCC------CceeEEECCChH-HHHHHHHhhc-------------------CCCCee
Q 018231 86 GNEYIDMAESLCQKRALEAFRLDPEK------WGVNVQSLSGSP-SNFQVYTALL-------------------KPHDRI 139 (359)
Q Consensus 86 ~~~~~~~l~~~~~~~~a~~~g~~~~~------~~~~v~~tsG~~-a~~~~~~al~-------------------~~Gd~V 139 (359)
......++|+.+.+++++++|.+.+. + ...++|+|++ +|+.++.+.. .|++.|
T Consensus 107 ~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~-~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 185 (475)
T 3k40_A 107 ASPACTELEVVMMDWLGKMLELPAEFLACSGGK-GGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG 185 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSS-CEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCCchhccccCCC-CCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence 34667889999999999999997420 0 1367777777 8776665541 145789
Q ss_pred eecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhC-----CcEEEEc-CCC-CCChhhH
Q 018231 140 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLYDY 212 (359)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~-----~k~v~l~-~~n-~g~~~~l 212 (359)
+++...|.++.. .+.+.|.+++.++ .+ +++ +|+++|++++++.+ +++|+++ +++ +|.+.|+
T Consensus 186 i~s~~~H~s~~~--------~~~~~g~~~~~v~--~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l 253 (475)
T 3k40_A 186 YCSDQAHSSVER--------AGLLGGVKLRSVQ--SE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYL 253 (475)
T ss_dssp EEETTSCHHHHH--------HHHHHTCEEEEEC--CB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred EECCCchHHHHH--------HHHHcCCceEEEE--CC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCH
Confidence 999988877643 3345576666665 55 557 99999999997631 5566665 555 8999999
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCCC---CCCCCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 213 ERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 213 ~~i~~la~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
++|+++|++||+++++|+||+.+....+... .++..+|++++++|||+++|.| |+++++++
T Consensus 254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~ 318 (475)
T 3k40_A 254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP 318 (475)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG
T ss_pred HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH
Confidence 9999999999999999999987765332111 1222479999999999999998 89999875
No 146
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.78 E-value=1.1e-18 Score=168.88 Aligned_cols=154 Identities=16% Similarity=0.128 Sum_probs=120.4
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++++++++|++. .|+++||+.++..++.+++++||+|+++.+.|+++..... ..+...|.++..++ .+
T Consensus 119 l~~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v~--~~ 187 (445)
T 1qgn_A 119 LEEKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TILPKMGITATVID--PA 187 (445)
T ss_dssp HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHH----HTGGGGTCEEEEEC--SS
T ss_pred HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCCEEEEeC--CC
Confidence 5588999999862 5899999888887889999999999999987776543211 01223465555453 33
Q ss_pred CCCCCCCHHHHHHHhhhhCC-cEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEE
Q 018231 177 ESTGYIDYDQLEKSATLFRP-KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~-k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (359)
|+++|++.+++ +| ++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+..... ... ++|+++
T Consensus 188 ------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~-~~~---g~Div~ 256 (445)
T 1qgn_A 188 ------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKA-LAL---GADLVL 256 (445)
T ss_dssp ------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCT-TTT---TCSEEE
T ss_pred ------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-ccc---CCEEEE
Confidence 89999999998 88 999988 777 89999999999999999999999999987653321 122 489999
Q ss_pred eCCCCcCCCCC---ceEEEEeC
Q 018231 254 TTTHKSLRGPR---GAMIFFRK 272 (359)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~ 272 (359)
+|+||+++|+. +|++++++
T Consensus 257 ~S~sK~~gg~gd~~~G~l~~~~ 278 (445)
T 1qgn_A 257 HSATKFLGGHNDVLAGCISGPL 278 (445)
T ss_dssp ECTTTTTTCSSSCCCEEEEECH
T ss_pred ECCcccccccccceEEEEEECH
Confidence 99999998765 69999877
No 147
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.65 E-value=1.1e-20 Score=179.94 Aligned_cols=238 Identities=13% Similarity=0.101 Sum_probs=156.1
Q ss_pred cCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeEEECCCh
Q 018231 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (359)
Q Consensus 47 ~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g--~~~~~~~~~v~~tsG~ 122 (359)
+.++|..+++ .+++.+++++.+.+.... .+| +.. ..++++.+.+++++.+| ++++ +|++|+|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~ 98 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLV-YGY------TYA--SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGV 98 (392)
Confidence 4577776665 457889999888775421 122 211 45666667777777777 4443 49999999
Q ss_pred H-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 123 ~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+ ++.+++.+++++||+|++..+.|.++.. .+...|.++..+++.....++.+|++++++.+++.+++++++
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (392)
T 3b1d_A 99 VPAISIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLL 170 (392)
Confidence 8 8888888999999999999966665432 344456555555432111135689999999987337888888
Q ss_pred c-CCC-CCChhh---HHHHHHHHHHcCCEEEEecccccccccc----CCCCCCC--CCceEEEeCCCCcCC--CCCceEE
Q 018231 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF--EYADVVTTTTHKSLR--GPRGAMI 268 (359)
Q Consensus 202 ~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~----~~~~~~~--~~~D~v~~s~~K~l~--gp~gG~l 268 (359)
+ ++| +|...+ +++|.++|++||+++|+|++|+...... ......- .+.++++.|++|+++ |.+.|++
T Consensus 171 ~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (392)
T 3b1d_A 171 CNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYA 250 (392)
Confidence 7 777 786654 8899999999999999999997543321 1111100 125688999999884 3344999
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
+++++ ++.+.+........+++++.+..+++.++|+.
T Consensus 251 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (392)
T 3b1d_A 251 IIENP-------------TLCAQFKHQQLVNNHHEVSSLGYIATETAYRY 287 (392)
Confidence 88763 34444433222222245566666666666653
No 148
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.78 E-value=7.7e-19 Score=168.33 Aligned_cols=227 Identities=11% Similarity=0.036 Sum_probs=142.7
Q ss_pred ccccccc-cChHHHHHHHHHHHH-----hhcCceeeCCC-------CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchh
Q 018231 23 LNAPLEV-VDPEIADIIEHEKAR-----QWKGLELIPSE-------NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89 (359)
Q Consensus 23 ~~~~~~~-~~~~~~~~~~~~~~~-----~~~~i~l~~~~-------~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~ 89 (359)
++++... .+..++..+...... ..+.|+|..++ .++++.+.+++.+...... .+| +...+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~Y------~~~~g 80 (413)
T 3t18_A 8 IKRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHI-ASY------APIEG 80 (413)
T ss_dssp CTTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHH-HSC------CCTTC
T ss_pred hhhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcccc-cCc------CCCCC
Confidence 3444433 344555555443221 12568887664 2468888888876432110 122 22234
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeee
Q 018231 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (359)
Q Consensus 90 ~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (359)
..++++++.+++....+.+.. .+|++|+|++ ++..++.++++|||+|+++++.|.++ ...+...|.++
T Consensus 81 ~~~lr~~la~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~--------~~~~~~~g~~~ 149 (413)
T 3t18_A 81 EKDYRKIVIDTLFGPYKPEGY---ISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPY--------RKICEEFGRNF 149 (413)
T ss_dssp CHHHHHHHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHH--------HHHHHHHTCEE
T ss_pred CHHHHHHHHHHHhcccCcccc---CcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccH--------HHHHHHhCCeE
Confidence 566776677777666554322 2599999999 88889999999999999999655443 33445567666
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhh---CCc-EEEEc-C-CC-CCChhhHH---HHHHHHH------HcCCEEEEeccc
Q 018231 169 ETMPYRLNESTGYIDYDQLEKSATLF---RPK-LIVAG-A-SA-YARLYDYE---RIRKVCN------KQKAIMLADMAH 232 (359)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~~---~~k-~v~l~-~-~n-~g~~~~l~---~i~~la~------~~~~~vivD~a~ 232 (359)
+.++ ...+++.+|+++|++.+++. +++ +++++ | +| +|...+.+ +|+++|+ +||+++|+|++|
T Consensus 150 ~~~~--~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y 227 (413)
T 3t18_A 150 KTFE--FFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAY 227 (413)
T ss_dssp EEEC--CBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTT
T ss_pred EEee--ccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEeccc
Confidence 5565 43245789999999998752 677 67776 7 78 88776655 5556666 899999999997
Q ss_pred cccccccCCCCCCC----CC--c---eEEEeCCCCcCCCC--CceEEEE
Q 018231 233 ISGLVAAGVIPSPF----EY--A---DVVTTTTHKSLRGP--RGAMIFF 270 (359)
Q Consensus 233 ~~g~~~~~~~~~~~----~~--~---D~v~~s~~K~l~gp--~gG~l~~ 270 (359)
..- ...+....++ .+ - .+++.|++|+++.+ +.|++++
T Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~ 275 (413)
T 3t18_A 228 LEF-AGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVG 275 (413)
T ss_dssp GGG-SSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEE
T ss_pred ccc-cCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEE
Confidence 422 2111110110 00 1 27888999987533 2399987
No 149
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.78 E-value=1.4e-18 Score=163.46 Aligned_cols=217 Identities=16% Similarity=0.100 Sum_probs=141.8
Q ss_pred cCceeeCCCCCC--cHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-
Q 018231 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (359)
Q Consensus 47 ~~i~l~~~~~~~--~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~- 123 (359)
+.|+|..++++. |+.+ + +.. . .+|+ ... ..+ +++.+++++|++++ +|++|+|++
T Consensus 30 ~~i~l~~~~~~~~~~~~v--a----~~~-~-~~Y~------~~~-~~~----lr~~la~~~~~~~~----~v~~~~G~~~ 86 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL--T----QQT-L-NRYP------ECQ-PKA----VIENYAQYAGVKPE----QVLVSRGADE 86 (356)
T ss_dssp CSEECSSCCCSSCCCCCC--C----CCC-T-TSCC------CSS-CHH----HHHHHHHHHTSCGG----GEEEESHHHH
T ss_pred ceEEeeCCCCCCCCCHhH--h----hhh-h-ccCC------Ccc-HHH----HHHHHHHHhCCChH----HEEEcCCHHH
Confidence 468999988863 4444 1 111 1 1222 222 233 55788888898765 499999999
Q ss_pred HHHHHHHhhcCCC-CeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 124 SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 124 a~~~~~~al~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
++..++.+++++| |+|+++.+.|.++. ..+...|.++..+ +.+ +++.+|++++++.++ ++++|+++
T Consensus 87 ai~~~~~~~~~~g~d~Vl~~~p~~~~~~--------~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~--~~~~v~l~ 153 (356)
T 1fg7_A 87 GIELLIRAFCEPGKDAILYCPPTYGMYS--------VSAETIGVECRTV--PTL-DNWQLDLQGISDKLD--GVKVVYVC 153 (356)
T ss_dssp HHHHHHHHHCCTTTCEEEECSSSCTHHH--------HHHHHHTCEEEEC--CCC-TTSCCCHHHHHTSCT--TEEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeCCChHHHH--------HHHHHcCCEEEEe--eCC-CCCCCCHHHHHHHhc--CCCEEEEe
Confidence 8887889999999 99999996665442 2344456555444 444 457899999998886 68999888
Q ss_pred -CCC-CCChhhHH---HHHHHHHHcCCEEEEeccccccccccCCCCC-CCCCceEEEeCCCCcCC--CCCceEEEEeCCc
Q 018231 203 -ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (359)
Q Consensus 203 -~~n-~g~~~~l~---~i~~la~~~~~~vivD~a~~~g~~~~~~~~~-~~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (359)
++| ||.+.+.+ +|.++|+ +|+++|+|++|+........... ...+.++++.|++|+++ |.+.|++++++
T Consensus 154 ~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-- 230 (356)
T 1fg7_A 154 SPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE-- 230 (356)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--
Confidence 777 88776655 5555566 99999999999754311111110 11136899999999874 33349999976
Q ss_pred chhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHH
Q 018231 275 KEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 275 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~ 317 (359)
++.+.+.....+ + +++.+...++.++|+
T Consensus 231 ------------~~~~~l~~~~~~--~-~~~~~~~~a~~~~l~ 258 (356)
T 1fg7_A 231 ------------EVINLLMKVIAP--Y-PLSTPVADIAAQALS 258 (356)
T ss_dssp ------------HHHHHHHHHSCS--S-CSCHHHHHHHHHHTS
T ss_pred ------------HHHHHHHHhcCC--C-CCCHHHHHHHHHHhc
Confidence 455544433221 1 456666666666664
No 150
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.78 E-value=2e-18 Score=166.23 Aligned_cols=189 Identities=13% Similarity=0.186 Sum_probs=136.8
Q ss_pred eeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 50 ELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 50 ~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
+|..+++. +|+.+++++.+.+.... |+. .....+ +++.+++++|.+ ++++|+|++ ++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~~---------y~~~~~~~~~----l~~~la~~~~~~------~v~~~~ggt~al 80 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQW---------LSNGGPLVRE----FEERVAGLAGVR------HAVATCNATAGL 80 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHTC---------CSSSCHHHHH----HHHHHHHHHTSS------EEEEESCHHHHH
T ss_pred cccccCCCCCChHHHHHHHHHHHhcCC---------cccCCHHHHH----HHHHHHHHhCCC------eEEEeCCHHHHH
Confidence 45555553 46799999988876421 222 244444 447788888875 389999998 88
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCC
Q 018231 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n 205 (359)
..++.++. +||+|++++++|.++.. .+...|.+++.++ .+++++.+|+++|++.+++ ++++|+++. .
T Consensus 81 ~~~l~~l~-~gd~Vlv~~~~~~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~ 147 (424)
T 2po3_A 81 QLLAHAAG-LTGEVIMPSMTFAATPH--------ALRWIGLTPVFAD--IDPDTGNLDPDQVAAAVTP-RTSAVVGVH-L 147 (424)
T ss_dssp HHHHHHHT-CCSEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTSSBCHHHHGGGCCT-TEEEEEEEC-G
T ss_pred HHHHHHcC-CCCEEEECCCccHHHHH--------HHHHcCCEEEEEe--cCCCcCCcCHHHHHHhhCc-CCcEEEEEC-C
Confidence 87887774 79999999977776543 2334566665554 5544678999999999987 889888753 3
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCC--CcCCCCCceEEEEeC
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRK 272 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp~gG~l~~~~ 272 (359)
+|...++++|.++|+++|+++|+|++|+.|....+. ... ...|++++|++ |+++++++|++++++
T Consensus 148 tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-~~~-~~~di~~~S~sk~K~l~~~~~G~~v~~~ 214 (424)
T 2po3_A 148 WGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR-PAG-SLGDAEVFSFHATKAVNAFEGGAVVTDD 214 (424)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETT-SSSSEEEEECCTTSSSCCSSCEEEEESC
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCe-ecc-cccCEEEEeCCCCCCccCCCCeEEEeCC
Confidence 788889999999999999999999999876653221 111 12478888877 888887779999884
No 151
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.78 E-value=2.8e-18 Score=168.81 Aligned_cols=197 Identities=12% Similarity=0.085 Sum_probs=132.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC-C--CCCCCceeEEECCChH-HHHHHHHhhc
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-L--DPEKWGVNVQSLSGSP-SNFQVYTALL 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g-~--~~~~~~~~v~~tsG~~-a~~~~~~al~ 133 (359)
.|..+++++.+.+.... + .....|+...+..++++++.+++.+..| + +++ +|++|+|++ ++..++.+++
T Consensus 102 ~P~~~~~~~~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~----~i~~t~G~~~ai~~~~~~l~ 174 (498)
T 3ihj_A 102 FPEDAKKRARRILQACG--G-NSLGSYSASQGVNCIREDVAAYITRRDGGVPADPD----NIYLTTGASDGISTILKILV 174 (498)
T ss_dssp SCHHHHHHHHHHHHHC-------------CCSCHHHHHHHHHHHHHHTTTCCCCGG----GEEEESSHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhcc--C-CCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcc----cEEEcCCHHHHHHHHHHHHc
Confidence 35666666666665421 0 0112244446667788888888888875 5 443 599999999 8887889999
Q ss_pred CCCC----eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh----CCcEEEEc-CC
Q 018231 134 KPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF----RPKLIVAG-AS 204 (359)
Q Consensus 134 ~~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~----~~k~v~l~-~~ 204 (359)
++|| +|+++.+.|+++ ...+...|..++.+++..+ +++.+|+++|++.+++. ++++|+++ |+
T Consensus 175 ~~gd~~~d~Vlv~~p~y~~~--------~~~~~~~g~~~v~~~~~~~-~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~ 245 (498)
T 3ihj_A 175 SGGGKSRTGVMIPIPQYPLY--------SAVISELDAIQVNYYLDEE-NCWALNVNELRRAVQEAKDHCDPKVLCIINPG 245 (498)
T ss_dssp CCCGGGSEEEEEEESCCTHH--------HHHHHHTTCEEEEEECBGG-GTTBCCHHHHHHHHHHHTTTSEEEEEEEESSC
T ss_pred CCCCCCCCEEEEeCCCchhH--------HHHHHHcCCEEEEeecccc-ccCCCCHHHHHHHHHhhhccCCCeEEEEECCC
Confidence 9876 999999666544 3344556766655554322 36789999999999864 48888887 88
Q ss_pred C-CCCh---hhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCC------------c-eEEEeCCCCcCC---CCC
Q 018231 205 A-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY------------A-DVVTTTTHKSLR---GPR 264 (359)
Q Consensus 205 n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~------------~-D~v~~s~~K~l~---gp~ 264 (359)
| ||.+ .++++|+++|++||+++|+|++|+......+....++.. . -+++.|++|.+. |.+
T Consensus 246 NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R 325 (498)
T 3ihj_A 246 NPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYR 325 (498)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSC
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccc
Confidence 8 8865 457789999999999999999986554432111111110 1 267789999984 556
Q ss_pred ceEEEE
Q 018231 265 GAMIFF 270 (359)
Q Consensus 265 gG~l~~ 270 (359)
+|++++
T Consensus 326 ~G~~~~ 331 (498)
T 3ihj_A 326 GGYMEV 331 (498)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 698885
No 152
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.78 E-value=7.7e-19 Score=164.15 Aligned_cols=200 Identities=19% Similarity=0.190 Sum_probs=130.9
Q ss_pred cCceeeCCCCC-CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHH
Q 018231 47 KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSN 125 (359)
Q Consensus 47 ~~i~l~~~~~~-~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~ 125 (359)
+.|+|..+.++ +++.+++++.+..... ..|.......+ +++++++++|.+. .+++++|+.++
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~~--------~~y~~~~~~~~----l~~~la~~~g~~~-----~~~~~~gt~a~ 66 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVGD--------DVYGEDPTINE----LERLAAETFGKEA-----ALFVPSGTMGN 66 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCCC--------GGGTCCHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHH
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCCC--------cccCCChHHHH----HHHHHHHHhCCce-----EEEecCcHHHH
Confidence 35788777664 5678888886543211 11222234444 4588889999853 35555555577
Q ss_pred HHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh-----CCcEEE
Q 018231 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIV 200 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~~k~v~ 200 (359)
..++.++++|||+|++++++|.+.+.... .+...|.+++.+ .+ +++.+|+++|++.+++. ++++|+
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v---~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~ 137 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGA-----MAVLSGVMPHPV---PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIA 137 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTH-----HHHHTCCEEEEE---CE-ETTEECHHHHHHHSCCSCTTSCCEEEEE
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccc-----hhhccCeEEEEe---cC-CCCccCHHHHHHHhccccccccCceEEE
Confidence 77888889999999999977654432110 122345544433 22 35678999999998751 588888
Q ss_pred Ec-CCC-C-CChh---hHHHHHHHHHHcCCEEEEeccccccccc-cCCCCCCC-CCceEEEeCCCCcCCCCCceEEEEeC
Q 018231 201 AG-ASA-Y-ARLY---DYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 201 l~-~~n-~-g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (359)
++ ++| + |... ++++|.++|+++|+++|+|++|..+... .+....++ .++|.+++|+||++++|.|++++.++
T Consensus 138 ~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 138 IENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred EeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 87 777 7 8664 4678899999999999999998654321 11111111 13788889999999887666666555
No 153
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.78 E-value=1.7e-18 Score=167.51 Aligned_cols=218 Identities=11% Similarity=0.022 Sum_probs=141.0
Q ss_pred hcCc-eeeCCCCCCcHHHHHHHHhhhhccCCC---CC--CC----CcccCCchhHHHHHHHHHHHHHHHcCC--CCCCCc
Q 018231 46 WKGL-ELIPSENFTSVSVMQAVGSVMTNKYSE---GY--PG----ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWG 113 (359)
Q Consensus 46 ~~~i-~l~~~~~~~~~~v~~al~~~~~~~~~~---g~--~~----~~~~~~~~~~~~l~~~~~~~~a~~~g~--~~~~~~ 113 (359)
.+.| +|..+.+..++.+.+++.+.+.+.+.. +. +. ...|+...+..++++.+.+++.+.+|+ +++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~--- 107 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE--- 107 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG---
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH---
Confidence 4678 898887766766666666555432211 00 10 122444455677887777888777765 444
Q ss_pred eeEEECCChH-HHHHHHHhhcCCCC--------------eeeec-CCCCCcccCccccccccceeeeeeeeEEEecccCC
Q 018231 114 VNVQSLSGSP-SNFQVYTALLKPHD--------------RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (359)
Q Consensus 114 ~~v~~tsG~~-a~~~~~~al~~~Gd--------------~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (359)
+|++|+|++ ++..++.+++++|| +|+++ +++|.++....... ......+. ..++++.+.
T Consensus 108 -~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~ 182 (444)
T 3if2_A 108 -NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEG--QHFAAVLP--HIDEVTHDG 182 (444)
T ss_dssp -GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSS--CCEEECCC--EEEEEEETT
T ss_pred -HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccccc--chhhccCc--eEEeccccc
Confidence 599999999 88888999999998 78876 76776654322100 01122233 334444542
Q ss_pred C----CCCCCHHHHHHH---hhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCCCC-
Q 018231 178 S----TGYIDYDQLEKS---ATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS- 244 (359)
Q Consensus 178 ~----~~~~d~e~l~~~---i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~- 244 (359)
+ ++.+|+++|+++ +++ ++++|+++ ++| +|.+.+ +++|.++|++||+++|+|++|+...........
T Consensus 183 ~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 261 (444)
T 3if2_A 183 EEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAH 261 (444)
T ss_dssp EEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCC
T ss_pred ccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccccc
Confidence 1 247899999987 555 78998887 888 897776 888999999999999999999643211111110
Q ss_pred -CCCCceEEEeCCCCcCC-CCCceEEEEeC
Q 018231 245 -PFEYADVVTTTTHKSLR-GPRGAMIFFRK 272 (359)
Q Consensus 245 -~~~~~D~v~~s~~K~l~-gp~gG~l~~~~ 272 (359)
...+.+++++|++|++. |.+.|+++.++
T Consensus 262 ~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 291 (444)
T 3if2_A 262 LNWDNNTILCFSLSKIGLPGMRTGIIVADA 291 (444)
T ss_dssp CCCCTTEEEEEESTTTTCGGGCCEEEECCH
T ss_pred ccCCCCEEEEechhhccCCCCceEEEEECH
Confidence 11247899999999632 22238888766
No 154
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.77 E-value=3.1e-18 Score=163.53 Aligned_cols=240 Identities=12% Similarity=0.127 Sum_probs=141.6
Q ss_pred cCceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHH--cC-CCCCCCceeEEECCC
Q 018231 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA--FR-LDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~--~g-~~~~~~~~~v~~tsG 121 (359)
+.|+|..+++ ++++.+++++.+.+..... . .....|+...+..+++ +.++++ +| ++++ +|++|+|
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~-~-~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~~----~v~~~~G 103 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSS-P-TTCRGYGPDFGLPALR----QKLSEDFYRGFVDAK----EIFISDG 103 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTS-S-SCCCCCCCTTCCHHHH----HHHHHTTSTTSSCGG----GEEEESC
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhcccc-c-ccccCCCCCCCCHHHH----HHHHHHHHcCCCCHH----HEEEccC
Confidence 5688887766 4688999999887754210 0 0111222223345544 666666 57 5554 4999999
Q ss_pred hH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeee-eEEEecccCCCCCCCCHHHHHHHhhhhCCcEE
Q 018231 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (359)
Q Consensus 122 ~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v 199 (359)
++ ++.. +..++++||+|++.++.|.++. ..+...|.+ +..++.+.+ +++..|+++ + + ++++|
T Consensus 104 ~~~al~~-~~~~~~~gd~Vl~~~p~y~~~~--------~~~~~~g~~~~~~~~~~~~-~~~~~~l~~----~-~-~~~~v 167 (400)
T 3asa_A 104 AKVDLFR-LLSFFGPNQTVAIQDPSYPAYL--------DIARLTGAKEIIALPCLQE-NAFFPEFPE----D-T-HIDIL 167 (400)
T ss_dssp HHHHHHH-HHHHHCSSCEEEEEESCCHHHH--------HHHHHTTCSEEEEEECCGG-GTTCCCCCT----T-C-CCSEE
T ss_pred hHHHHHH-HHHHcCCCCEEEECCCCcHHHH--------HHHHHcCCcceEecccchh-cCcccChhh----c-c-CccEE
Confidence 99 6664 4566789999999996665442 233344555 555653221 233445432 1 3 78999
Q ss_pred EEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccc----cCCCCCCC-CCceEEEeCCCCcCC--CCCceE
Q 018231 200 VAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA----AGVIPSPF-EYADVVTTTTHKSLR--GPRGAM 267 (359)
Q Consensus 200 ~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~----~~~~~~~~-~~~D~v~~s~~K~l~--gp~gG~ 267 (359)
+++ ++| +|.+.+ +++|.++|+++|+++|+|++|+..... ..+...+. .+.++++.|++|+++ |.+.|+
T Consensus 168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~ 247 (400)
T 3asa_A 168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGW 247 (400)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEE
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeE
Confidence 987 777 886665 667889999999999999999732211 11111110 124588999999884 333499
Q ss_pred EEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHH
Q 018231 268 IFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 268 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
++++++..... +. ++....... ....+++++.+...++.++|+..
T Consensus 248 ~~~~~~~~~~~--~~----~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~ 292 (400)
T 3asa_A 248 TVIPQELTYAD--GH----FVIQDWERF-LSTTFNGASIPAQEAGVAGLSIL 292 (400)
T ss_dssp EECCTTCBCTT--SC----BHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHT
T ss_pred EeeChhhccch--hh----hHHHHHHHH-hccCccCCChHHHHHHHHHhCcH
Confidence 99887531000 00 011111000 00113466777777777777653
No 155
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.77 E-value=8.2e-19 Score=168.60 Aligned_cols=155 Identities=13% Similarity=0.049 Sum_probs=118.0
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .+++++|+.++.+++.+++++||+|+++++.|++...+... .....|.++..++ .+
T Consensus 87 le~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~l~~~G~~v~~v~--~~ 155 (415)
T 2fq6_A 87 LQQAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSK----ILSKLGVTTSWFD--PL 155 (415)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHH----TGGGGTCEEEEEC--TT
T ss_pred HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHH----HHHHcCcEEEEEC--CC
Confidence 5588999999863 46676665588878999999999999999888776543321 1122355554443 22
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHH--cCCEEEEeccccccccccCCCCCCCCCceEE
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVV 252 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~--~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v 252 (359)
|+++|++++++ +|++|+++ ++| +|.+.|+++|+++|++ +|+++|+|++|+.+.....+ .. ++|++
T Consensus 156 ------d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~-~~---g~Div 224 (415)
T 2fq6_A 156 ------IGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL-DF---GIDVS 224 (415)
T ss_dssp ------CGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG-GG---TCSEE
T ss_pred ------CHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc-cc---CCeEE
Confidence 88999999987 89999987 778 8999999999999999 99999999999865322111 12 48999
Q ss_pred EeCCCCcCCCCC---ceEEEEeCC
Q 018231 253 TTTTHKSLRGPR---GAMIFFRKG 273 (359)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~~ 273 (359)
++|+||+++++. +|+++++++
T Consensus 225 ~~S~sK~lg~~g~~~~G~l~~~~~ 248 (415)
T 2fq6_A 225 IQAATKYLVGHSDAMIGTAVCNAR 248 (415)
T ss_dssp EEETTTTTTCSSSCCCEEEEECTT
T ss_pred EEeCccccCCCCCceEEEEEeCHH
Confidence 999999998765 588888774
No 156
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.77 E-value=1.4e-18 Score=165.28 Aligned_cols=154 Identities=20% Similarity=0.180 Sum_probs=119.2
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+ + .|++++|+.++..++.+++++||+|+++.+.|++.+.+... .+...|.++..++ .+
T Consensus 57 l~~~la~~~~~~-~----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~~--~~ 125 (386)
T 1cs1_A 57 VQRALAELEGGA-G----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDS----LAKRGCYRVLFVD--QG 125 (386)
T ss_dssp HHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHH----HHTTTSCEEEEEC--TT
T ss_pred HHHHHHHHhCCC-c----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHH----HHHhcCCEEEEeC--CC
Confidence 558888999886 2 58889995588888888899999999999888765432211 1123354454443 32
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEe
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (359)
|++++++.+++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+...... .. ++|++++
T Consensus 126 ------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~di~~~ 194 (386)
T 1cs1_A 126 ------DEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-AL---GADLVLH 194 (386)
T ss_dssp ------CHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCSEEEE
T ss_pred ------CHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cc---CceEEEE
Confidence 89999999987 89999998 777 898899999999999999999999999877654222 12 4899999
Q ss_pred CCCCcCCCCCc---eEEEEeC
Q 018231 255 TTHKSLRGPRG---AMIFFRK 272 (359)
Q Consensus 255 s~~K~l~gp~g---G~l~~~~ 272 (359)
|+||++++|.+ |++++++
T Consensus 195 s~sK~~~~~~~~~~G~~~~~~ 215 (386)
T 1cs1_A 195 SCTKYLNGHSDVVAGVVIAKD 215 (386)
T ss_dssp ETTTTTTCSSCCCCEEEEESS
T ss_pred cCcccccCCCCceeEEEEeCc
Confidence 99999987764 8898876
No 157
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.76 E-value=1.5e-18 Score=166.86 Aligned_cols=222 Identities=16% Similarity=0.067 Sum_probs=147.9
Q ss_pred ccccccChHHHHHHHHHHHHhhcCceeeCCCCC-----CcHHHHHHHH--hhhhccCCCCCCCCccc-CCchhHHHHHHH
Q 018231 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVG--SVMTNKYSEGYPGARYY-GGNEYIDMAESL 96 (359)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~v~~al~--~~~~~~~~~g~~~~~~~-~~~~~~~~l~~~ 96 (359)
+.++.+.++++..+.+.. .....|+|..+... +++.+++++. +.+.+.. ....| +...+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~-----~~~~Yp~~~~g~~~l--- 75 (423)
T 3ez1_A 5 EASRPALDLARQAYEAFK-ARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGL-----DLRNYPGGVAGLPSA--- 75 (423)
T ss_dssp -CCHHHHHHHHHHHHHHH-HHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTE-----ETTSSCSCTTCCHHH---
T ss_pred HHHHHHHHHHHHHHHHhh-cCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcch-----hhhCCCCCCCChHHH---
Confidence 356667788888888754 34467899877654 4557777775 4433210 01123 223444544
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChH-HHH--HHHHhhcC--C---------CCeeeecCCCCCcccCcccccccccee
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNF--QVYTALLK--P---------HDRIMALDLPHGGHLSHGYQTDTKKIS 162 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~--~~~~al~~--~---------Gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (359)
++.+++++++++++ |++|+|++ ++. .++.++++ | ||+|++..+.|.++ ...+.
T Consensus 76 -r~~ia~~~~~~~~~----i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~--------~~~~~ 142 (423)
T 3ez1_A 76 -RALFAGYLDVKAEN----VLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRH--------FLLLQ 142 (423)
T ss_dssp -HHHHHHHTTSCGGG----EEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHH--------HHHHH
T ss_pred -HHHHHHHhCCChhh----EEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHH--------HHHHH
Confidence 47888888988754 99999999 775 68888887 8 59999999555443 32445
Q ss_pred eeeeeeEEEecccCCCCCCCCHHHHHHHhh-hhCCcEEEEc--CCC-CCChhhHH---HHHHHH-HHcCCEEEEeccccc
Q 018231 163 AVSIFFETMPYRLNESTGYIDYDQLEKSAT-LFRPKLIVAG--ASA-YARLYDYE---RIRKVC-NKQKAIMLADMAHIS 234 (359)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~-~~~~k~v~l~--~~n-~g~~~~l~---~i~~la-~~~~~~vivD~a~~~ 234 (359)
..|.++..++ .+ ++ .+|+++|++.++ ..++++|++. ++| +|...+.+ +|.++| ++||+++|+|++|+.
T Consensus 143 ~~g~~~~~v~--~~-~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 143 TLGFELLTVD--MQ-SD-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp HHTCEEEEEE--EE-TT-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred HcCCEEEecc--CC-CC-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 5676665565 44 22 389999999995 2378888764 577 88776655 888888 899999999999874
Q ss_pred ccccc-CCCCC----------CCCCceEEEeCCCCcC-CCCCceEEEEeC
Q 018231 235 GLVAA-GVIPS----------PFEYADVVTTTTHKSL-RGPRGAMIFFRK 272 (359)
Q Consensus 235 g~~~~-~~~~~----------~~~~~D~v~~s~~K~l-~gp~gG~l~~~~ 272 (359)
..+.. +.... ...+.++++.|++|++ .|.+.|+++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 219 HHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp CBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred hhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 33322 11100 0113679999999964 344449999877
No 158
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.76 E-value=1.6e-18 Score=166.14 Aligned_cols=153 Identities=18% Similarity=0.170 Sum_probs=118.6
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .|++++|+.++..++. ++++||+|+++++.|++++..... .+...|.++..++ .+
T Consensus 72 l~~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~v~~v~--~~ 139 (403)
T 3cog_A 72 LEKAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQ----VASEFGLKISFVD--CS 139 (403)
T ss_dssp HHHHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHH----TGGGGTCEEEEEC--TT
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHH----HHHHcCCEEEEEC--CC
Confidence 4588888998862 5999999777776777 899999999999888765432211 1223465554453 33
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcC-CEEEEeccccccccccCCCCCCCCCceEEE
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~-~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (359)
|++++++.+++ ++++|+++ ++| +|.+.|+++|.++|+++| +++|+|++|+.+.....+. . ++|+++
T Consensus 140 ------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~-~---~~div~ 208 (403)
T 3cog_A 140 ------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLA-L---GADISM 208 (403)
T ss_dssp ------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTT-T---TCSEEE
T ss_pred ------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccc-c---CCeEEE
Confidence 89999999987 89999988 778 899999999999999999 9999999998765422221 2 489999
Q ss_pred eCCCCcCCCCCc---eEEEEeC
Q 018231 254 TTTHKSLRGPRG---AMIFFRK 272 (359)
Q Consensus 254 ~s~~K~l~gp~g---G~l~~~~ 272 (359)
.|++|+|+||.+ |++++++
T Consensus 209 ~S~sK~~~g~~~~~~G~v~~~~ 230 (403)
T 3cog_A 209 YSATKYMNGHSDVVMGLVSVNC 230 (403)
T ss_dssp EETTTTTTCSSCCCCEEEEECC
T ss_pred EcChhhccCCCCCeEEEEEECc
Confidence 999999988764 9998865
No 159
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.76 E-value=1.9e-18 Score=164.98 Aligned_cols=240 Identities=10% Similarity=0.023 Sum_probs=147.2
Q ss_pred cCceeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEE-CCChH-H
Q 018231 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP-S 124 (359)
Q Consensus 47 ~~i~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~-tsG~~-a 124 (359)
..+++.+++.++|+.|++++.+...... +. .+.+ ....++.+.+++++++++|++.++ +|++ |+|++ +
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~--~~~~---~~~~~~~~~~~~~la~~~g~~~~~---~i~~~t~g~t~a 109 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTAAALF--GT--SHRQ---APVKNLVGRVRSGLAELFSLPDGY---EVILGNGGATAF 109 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTTTTTT--TS--CTTS---HHHHHHHHHHHHHHHHHTTCCTTC---EEEEEETCHHHH
T ss_pred CCccccCCCCCCCHHHHHHHhhcCCCcc--Cc--CcCC---HHHHHHHHHHHHHHHHHhCCCCCc---eEEEeCCchhHH
Confidence 4678889988999999999877311100 10 0111 122344455889999999997432 5888 99999 8
Q ss_pred HHHHHHhhcCCC-CeeeecCCCCCcccCccccccccceeee--eeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 125 NFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 125 ~~~~~~al~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
+..++.++++|| |.| ....|+... . . .+... |..++.+++ + ++...+. .+++ +|++|++
T Consensus 110 l~~~~~~l~~~gv~~v--~~~~~~~~~---~---~-~~~~~~~g~~~~~v~~--~-~g~~~~~-----~i~~-~~~~v~~ 171 (398)
T 2fyf_A 110 WDAAAFGLIDKRSLHL--TYGEFSAKF---A---S-AVSKNPFVGEPIIITS--D-PGSAPEP-----QTDP-SVDVIAW 171 (398)
T ss_dssp HHHHHHHTCSSCEEEE--ECSHHHHHH---H---H-HHHHCTTSCCCEEEEC--C-TTCCCCC-----CCCT-TCSEEEE
T ss_pred HHHHHHHhcCCCeEEE--eCCHHHHHH---H---H-HHHHhCCCCceEEEec--C-CCCCCCc-----cccC-CCCEEEE
Confidence 888999999888 444 221121000 0 0 11112 445555653 3 3333332 1455 8999988
Q ss_pred c-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCcchhc
Q 018231 202 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (359)
Q Consensus 202 ~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (359)
+ ++| +|.+.|+++|.++ +|+++|+|++|+.+..+.++. ++|++++|+||+++++.| |++++++++...+
T Consensus 172 ~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-----~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l 243 (398)
T 2fyf_A 172 AHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-----ETDAYYFAPQKNFASDGGLWLAIMSPAALSRI 243 (398)
T ss_dssp ESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-----GCSEEEECTTSTTCSCSSEEEEEECHHHHHHH
T ss_pred eCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-----cCcEEEEecCcccCCCCceEEEEECHHHHHHh
Confidence 7 667 8988898888776 899999999999887665432 379999999999877655 8888887531110
Q ss_pred c----CCc--chhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 279 K----QGK--EVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 279 ~----~g~--~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
. .|. ..+................+|++...++++.+|++.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~ 293 (398)
T 2fyf_A 244 EAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGN 293 (398)
T ss_dssp HHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred hcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 0 000 0000000000000011234789999999999999877654
No 160
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.75 E-value=1.4e-18 Score=163.19 Aligned_cols=197 Identities=12% Similarity=0.067 Sum_probs=127.3
Q ss_pred cCceeeCCCCCC--cHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHH
Q 018231 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 124 (359)
Q Consensus 47 ~~i~l~~~~~~~--~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a 124 (359)
..+.+.+++|++ +|.+++++.+.+... .|+......+ +++++++++|.+. .+++++|+.+
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~---------~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~~g~~a 75 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNLESD---------IYGNGAVIED----FETKIAKILGKQS-----AVFFPSGTMA 75 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTCBCC---------BTTBSHHHHH----HHHHHHHHHTCSE-----EEEESCHHHH
T ss_pred chhhcCCCccccCCCHHHHHHHHhhcccC---------cccCCHHHHH----HHHHHHHHhCCCc-----EEEeCCHHHH
Confidence 556777888876 788888877743321 1222233444 4588899999865 3666666558
Q ss_pred HHHHHHhhcCCCCe--eeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 018231 125 NFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (359)
Q Consensus 125 ~~~~~~al~~~Gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~ 202 (359)
+..++.+++.+||+ |++....|........ .....|.++..+ +. +++.+|+++|++. .+ ++++|+++
T Consensus 76 ~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~--~~~~~d~~~l~~~-~~-~~~~v~~~ 144 (359)
T 3pj0_A 76 QQIALRIWADRKENRRVAYHPLSHLEIHEQDG-----LKELQQITPLLL--GT--ANQLLTIDDIKSL-RE-PVSSVLIE 144 (359)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHHCCEEEEC--SC--TTSCCCHHHHHTC-SS-CCSEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEeccceeeehhcch-----HHHhcCceEEec--CC--cCCCcCHHHHHhc-cC-CceEEEEE
Confidence 88788888889987 4444332222211000 012345555444 33 4578999999987 55 89999998
Q ss_pred -CCC-C-CChhh---HHHHHHHHHHcCCEEEEecccccccccc-CCCCCCC-CCceEEEeCCCCcCCCCCceEEEEeC
Q 018231 203 -ASA-Y-ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 203 -~~n-~-g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~-~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (359)
++| + |...+ +++|.++|++||+++|+|++|..+.... +.....+ .+.|+++.|+||+|++|.||+++.++
T Consensus 145 ~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~ 222 (359)
T 3pj0_A 145 LPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGND 222 (359)
T ss_dssp SSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred ecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCH
Confidence 656 4 56655 5555999999999999999986554211 1111000 13799999999999888777777766
No 161
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.75 E-value=7.1e-18 Score=160.46 Aligned_cols=228 Identities=10% Similarity=0.012 Sum_probs=142.8
Q ss_pred ccccChHHHHHHHHHHHHh--hcCceeeCCC-----C--CCcHHHHHHHHh-hhhccCCCCCCCCcccCCchhHHHHHHH
Q 018231 27 LEVVDPEIADIIEHEKARQ--WKGLELIPSE-----N--FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESL 96 (359)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~-----~--~~~~~v~~al~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (359)
+..++++....+.+..... .+.|+|..+. . ++++.|++++.+ .+......+| +...+..+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y------~~~~g~~~lr~~ 78 (397)
T 3fsl_A 5 VDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLY------LPMEGLNCYRHA 78 (397)
T ss_dssp CCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCC------CCTTCCHHHHHH
T ss_pred CCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccC------CCCCchHHHHHH
Confidence 3444454444443332222 2568888772 2 234899999998 7764221123 222445566655
Q ss_pred HHHHHHHHcCC--CCCCCceeEEECCChH-HHHHH--HHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEE
Q 018231 97 CQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (359)
Q Consensus 97 ~~~~~a~~~g~--~~~~~~~~v~~tsG~~-a~~~~--~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (359)
+.+++....+. +++. .+|++|+|++ ++..+ +.+++++||+|+++.+.|.++ ...+...|.++..+
T Consensus 79 la~~~~~~~~~~~~~~~--~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~--------~~~~~~~g~~~~~~ 148 (397)
T 3fsl_A 79 IAPLLFGADHPVLKQQR--VATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENH--------VAIFAGAGFEVSTY 148 (397)
T ss_dssp HHHHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHH--------HHHHHHTTCCEEEE
T ss_pred HHHHHhcCCcccccccc--eEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhH--------HHHHHHcCCceEEE
Confidence 55555443331 3431 1499999999 77766 356689999999999655543 22444567666666
Q ss_pred ecccCCCCCCCCHHHHHHHhhh--hCCcEEEEc-CCC-CCCh---hhHHHHHHHHHHcCCEEEEeccccccccccCCCCC
Q 018231 172 PYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (359)
Q Consensus 172 ~~~~~~~~~~~d~e~l~~~i~~--~~~k~v~l~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~ 244 (359)
++..+ +++.+|++++++.+++ .++++++++ ++| +|.. .++++|+++|++||+++|+|++|+......+....
T Consensus 149 ~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (397)
T 3fsl_A 149 PWYDE-ATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAY 227 (397)
T ss_dssp CCEET-TTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGH
T ss_pred eeeec-cCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccH
Confidence 54222 5678999999999973 267788777 777 8866 45779999999999999999998644322100000
Q ss_pred ------CCCCceEEEeCCCCcCC--CCCceEEEEe
Q 018231 245 ------PFEYADVVTTTTHKSLR--GPRGAMIFFR 271 (359)
Q Consensus 245 ------~~~~~D~v~~s~~K~l~--gp~gG~l~~~ 271 (359)
...+..+++.|.+|.++ |.+-|++++.
T Consensus 228 ~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~ 262 (397)
T 3fsl_A 228 AIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVM 262 (397)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred HHHHHHhcCCCEEEEecccccccCcCCCeeEEEEe
Confidence 00125688999999874 3333888764
No 162
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.75 E-value=7.7e-18 Score=161.28 Aligned_cols=260 Identities=13% Similarity=0.068 Sum_probs=155.8
Q ss_pred ccccccChHHHHHHHHHHHH--hhcCceeeCCCC-------CCcHHHHHHHHh-hhhccCCCCCCCCcccCCchhHHHHH
Q 018231 25 APLEVVDPEIADIIEHEKAR--QWKGLELIPSEN-------FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAE 94 (359)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~-------~~~~~v~~al~~-~~~~~~~~g~~~~~~~~~~~~~~~l~ 94 (359)
+++..+.++.+..+.+.... ..+.|+|..+.. ++++.+.+++.+ .+......+ |+...+..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~lr 79 (412)
T 1yaa_A 6 NNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHE------YLGITGLPSLT 79 (412)
T ss_dssp TTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCC------CCCTTCCHHHH
T ss_pred ccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccC------CCCCCCcHHHH
Confidence 44455555544434333332 135688876652 467999999998 765311112 22234456666
Q ss_pred HHHHHHHHHHcCC--CCCCCceeEEE--CCChH-HHHHH--HHhhcCCCCeeeecCCCCCcccCccccccccceeeeeee
Q 018231 95 SLCQKRALEAFRL--DPEKWGVNVQS--LSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (359)
Q Consensus 95 ~~~~~~~a~~~g~--~~~~~~~~v~~--tsG~~-a~~~~--~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (359)
+++.+++...+|. +++ +|++ |+|++ ++..+ +..++.|||+|+++++.|.++.. .+...|.+
T Consensus 80 ~~ia~~~~~~~~~~~~~~----~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~ 147 (412)
T 1yaa_A 80 SNAAKIIFGTQSDALQED----RVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--------IFENQGLK 147 (412)
T ss_dssp HHHHHHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--------HHHTTTCC
T ss_pred HHHHHHHhcCCCCCCCcc----eEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH--------HHHHcCce
Confidence 6566666544442 344 3888 99988 77755 34556899999999976665432 33445666
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhhC--CcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccc---
Q 018231 168 FETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLV--- 237 (359)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~--~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~--- 237 (359)
+..++.. +++++.+|+++|++.+++.+ +.+++++ ++| ||... ++++|.++|++||+++|+|++|+....
T Consensus 148 ~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 226 (412)
T 1yaa_A 148 TATYPYW-ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDL 226 (412)
T ss_dssp EEEEECE-ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCH
T ss_pred EEEEeee-cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 6556531 32467899999999997632 3344446 777 88664 577889999999999999999853211
Q ss_pred -----cc-CCCCCCCCC--ceEEEeCCCCcCCCCCc---eEEE--E----eCCcchhccCCcchhhh----HHHhhcccc
Q 018231 238 -----AA-GVIPSPFEY--ADVVTTTTHKSLRGPRG---AMIF--F----RKGVKEINKQGKEVFYD----YEEKINQAV 296 (359)
Q Consensus 238 -----~~-~~~~~~~~~--~D~v~~s~~K~l~gp~g---G~l~--~----~~~~~~~~~~g~~~~~~----~~~~~~~~~ 296 (359)
+. .+.... .. .++++.|++|+++ +.| |+++ + +++ + +.+.+....
T Consensus 227 ~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~-~~GlriG~~~~~~~~~~~~~-------------~~~~~l~~~l~~~~ 291 (412)
T 1yaa_A 227 DKDAYAVRLGVEKL-STVSPVFVCQSFAKNAG-MYGERVGCFHLALTKQAQNK-------------TIKPAVTSQLAKII 291 (412)
T ss_dssp HHHTHHHHHHHHHT-TTTCCEEEEEECTTTSC-CGGGCEEEEEEECCSCTTHH-------------HHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHhcC-CCCcceEEEeccCCCCC-CcCCcceEEEEEecCCCCCH-------------HHHHHHHHHHHHHH
Confidence 11 110011 00 3688999999874 545 8887 5 132 2 334333311
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHH
Q 018231 297 FPGLQGGPHNHTITGLAVALKQV 319 (359)
Q Consensus 297 ~~~~~gt~~~~~i~al~~Al~~~ 319 (359)
. ...++++.+...++.++|+..
T Consensus 292 ~-~~~~~~~~~~~~a~~~~l~~~ 313 (412)
T 1yaa_A 292 R-SEVSNPPAYGAKIVAKLLETP 313 (412)
T ss_dssp H-TTTSSCCHHHHHHHHHHHHSH
T ss_pred h-hccCCCChHHHHHHHHHhCCH
Confidence 1 123455667777777777543
No 163
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.75 E-value=2e-17 Score=158.24 Aligned_cols=225 Identities=9% Similarity=-0.018 Sum_probs=142.3
Q ss_pred cccccccChHHHHHHHHHHHH--hhcCceeeCCCC-------CCcHHHHHHHHhhhhcc-CCCCCCCCcccCCchhHHHH
Q 018231 24 NAPLEVVDPEIADIIEHEKAR--QWKGLELIPSEN-------FTSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMA 93 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~-------~~~~~v~~al~~~~~~~-~~~g~~~~~~~~~~~~~~~l 93 (359)
.+++..+.++.+..+.+.... ..+.|+|..+.. ++++.+.+++.+.+.+. ...+ |+...+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~l 79 (412)
T 1ajs_A 6 FAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHE------YLPILGLAEF 79 (412)
T ss_dssp TTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCC------CCCTTCCHHH
T ss_pred hhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccC------CCCCCCCHHH
Confidence 345566666666655554332 235688887652 45689999998876321 1112 2222344566
Q ss_pred HHHHHHHHHHHcCC--CCCCCceeEEE--CCChH-HHHHHH--HhhcCCC-----CeeeecCCCCCcccCccccccccce
Q 018231 94 ESLCQKRALEAFRL--DPEKWGVNVQS--LSGSP-SNFQVY--TALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKI 161 (359)
Q Consensus 94 ~~~~~~~~a~~~g~--~~~~~~~~v~~--tsG~~-a~~~~~--~al~~~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~ 161 (359)
++++.+++...+|. +++ +|++ |+|++ ++..++ .+++++| |+|+++.+.|.++. ..+
T Consensus 80 r~~la~~~~~~~~~~~~~~----~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~--------~~~ 147 (412)
T 1ajs_A 80 RTCASRLALGDDSPALQEK----RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN--------GVF 147 (412)
T ss_dssp HHHHHHHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH--------HHH
T ss_pred HHHHHHHHhcCCCCccCCC----cEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHH--------HHH
Confidence 64444444333332 444 3888 99998 777664 3557899 99999996666542 234
Q ss_pred eeeeee-eEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEc-CCC-CCCh---hhHHHHHHHHHHcCCEEEEecccc
Q 018231 162 SAVSIF-FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHI 233 (359)
Q Consensus 162 ~~~g~~-~~~v~~~~~~~~~~~d~e~l~~~i~~~--~~k~v~l~-~~n-~g~~---~~l~~i~~la~~~~~~vivD~a~~ 233 (359)
...|.+ +..+++..+ +++.+|++++++.+++. ++++++++ ++| +|.. .++++|.++|++||+++|+|+++.
T Consensus 148 ~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~ 226 (412)
T 1ajs_A 148 TTAGFKDIRSYRYWDT-EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ 226 (412)
T ss_dssp HHTTCSCEEEEECEET-TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred HHcCCceeEEEeeecC-CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 445666 655654222 45789999999998753 46677677 777 8865 457789999999999999999975
Q ss_pred ccccc--------cC-CCCCCCCCceEEEeCCCCcCCCCCc---eEEEE
Q 018231 234 SGLVA--------AG-VIPSPFEYADVVTTTTHKSLRGPRG---AMIFF 270 (359)
Q Consensus 234 ~g~~~--------~~-~~~~~~~~~D~v~~s~~K~l~gp~g---G~l~~ 270 (359)
..... .. +...+ ..++++.|++|.++ +.| |++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~-~~G~riG~~~~ 272 (412)
T 1ajs_A 227 GFASGNLEKDAWAIRYFVSEG--FELFCAQSFSKNFG-LYNERVGNLTV 272 (412)
T ss_dssp TTTTSCHHHHTHHHHHHHHTT--CCEEEEEECTTTSC-CGGGCEEEEEE
T ss_pred cccCCcccccchHHHHHhccC--CcEEEEEecccccC-CCCcceEEEEE
Confidence 32111 10 10011 13488999999874 344 89988
No 164
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.75 E-value=4.3e-18 Score=162.48 Aligned_cols=154 Identities=18% Similarity=0.182 Sum_probs=115.9
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|++....... .....|.++..++ .+
T Consensus 71 l~~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~----~~~~~g~~~~~v~--~~ 139 (392)
T 3qhx_A 71 LEAALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDK----VFTGWNVEYTPVA--LA 139 (392)
T ss_dssp HHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHH----TGGGGTCEEEEEC--TT
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHH----HHHhcCcEEEEeC--CC
Confidence 5688999999863 35555554488888888999999999999888765432211 1123455554443 33
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEe
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (359)
|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+... ..... ++|+++.
T Consensus 140 ------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-~~~~~---~~di~~~ 208 (392)
T 3qhx_A 140 ------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-QPLSL---GADVVLH 208 (392)
T ss_dssp ------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-CGGGG---TCSEEEE
T ss_pred ------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-ChHHh---CCcEEEE
Confidence 89999999987 89999987 777 899999999999999999999999999755322 11112 4899999
Q ss_pred CCCCcCCCCC---ceEEEEeC
Q 018231 255 TTHKSLRGPR---GAMIFFRK 272 (359)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~ 272 (359)
|+||+++++. +|++++++
T Consensus 209 S~sK~lg~~g~~~~G~v~~~~ 229 (392)
T 3qhx_A 209 STTKYIGGHSDVVGGALVTND 229 (392)
T ss_dssp ETTTTTTCSSCCCCEEEEESC
T ss_pred cCccccCCCCCceEEEEEECc
Confidence 9999997654 68888875
No 165
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.75 E-value=2.7e-18 Score=165.43 Aligned_cols=238 Identities=13% Similarity=0.052 Sum_probs=152.3
Q ss_pred hcCceeeCCCC-C--CcHHH--HHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHc-CCCCCCCcee---E
Q 018231 46 WKGLELIPSEN-F--TSVSV--MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF-RLDPEKWGVN---V 116 (359)
Q Consensus 46 ~~~i~l~~~~~-~--~~~~v--~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~-g~~~~~~~~~---v 116 (359)
.+.|+|..+++ . .++.+ ++++.+.+..... ..|+...+..++++++.+++.+.. +++++ + |
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~~i 116 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEI------FPYAPPQGIEELRDLWQQKMLRDNPELSID----NMSRP 116 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGT------SSCCCTTCCHHHHHHHHHHHHHHCTTCCGG----GBCCC
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccc------cccCCCCCCHHHHHHHHHHHhccCcccCCC----ccceE
Confidence 46789988776 3 34555 6666555432001 122332345666655555554443 55543 5 8
Q ss_pred EECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceee-eeeeeEEEecccCCCCCCCCHHHHHHHhhhh
Q 018231 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA-VSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (359)
Q Consensus 117 ~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (359)
++|+|++ ++..++.++++|||+|+++++.|.++.. .+.. .|.++..++ .+.+++.+|+++|++.+++.
T Consensus 117 ~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~l~~~ 186 (430)
T 2x5f_A 117 IVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGANLQTYP--IFDKDGHYTTDSLVEALQSY 186 (430)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCCEEEEEC--CBCTTSCBCSHHHHHHHHHC
T ss_pred EEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCCeEEEEe--ccCccCCcCHHHHHHHHHhc
Confidence 9999988 8888999999999999999977665432 3334 465555554 44323678999999998752
Q ss_pred --CCcEEEEc-CCC-CCChhh---HHHHHHHHHH-----cCCEEEEeccccccccccC-CCC----C-CCCCc---eEEE
Q 018231 195 --RPKLIVAG-ASA-YARLYD---YERIRKVCNK-----QKAIMLADMAHISGLVAAG-VIP----S-PFEYA---DVVT 253 (359)
Q Consensus 195 --~~k~v~l~-~~n-~g~~~~---l~~i~~la~~-----~~~~vivD~a~~~g~~~~~-~~~----~-~~~~~---D~v~ 253 (359)
++++++++ |+| +|...+ +++|.++|++ +|+++|+|++|+....... ... . ...+. ++++
T Consensus 187 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (430)
T 2x5f_A 187 NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRL 266 (430)
T ss_dssp CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEE
T ss_pred CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEE
Confidence 67888887 877 887766 8899999999 9999999999875433211 000 0 01125 7889
Q ss_pred eCCCCcCCCC--CceEEEE---eCCcchhccCCcchhhhHHHhhccccCC---CCCCCCcHHHHHHHHHHHH
Q 018231 254 TTTHKSLRGP--RGAMIFF---RKGVKEINKQGKEVFYDYEEKINQAVFP---GLQGGPHNHTITGLAVALK 317 (359)
Q Consensus 254 ~s~~K~l~gp--~gG~l~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~gt~~~~~i~al~~Al~ 317 (359)
+|++|+|+.| +.|++++ ++ ++.+.+...... ....+++.+..+++.++|+
T Consensus 267 ~s~sK~~~~~G~riG~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 267 DGATKEFFAWGFRVGFMTFGTSDQ--------------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp EEHHHHTTCGGGCCEEEEEBCCCH--------------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred EecccCCCCCCCCeEEEEEecCCH--------------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 9999988433 2399998 55 333333221111 1234567777778878776
No 166
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.75 E-value=2.3e-18 Score=164.45 Aligned_cols=152 Identities=14% Similarity=0.114 Sum_probs=115.9
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .+++++|+.++..++. ++++||+|+++.+.|++.+.... ..+...|.++..++ .+
T Consensus 60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v~--~~ 127 (393)
T 1n8p_A 60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFT----KVANAHGVETSFTN--DL 127 (393)
T ss_dssp HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHH----HTSTTTCSCCEEES--SH
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHH----HHHHHcCcEEEEeC--CC
Confidence 6688999999862 4888888558887888 89999999999988775533211 01223455555554 32
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHc----CCEEEEeccccccccccCCCCCCCCCce
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ----KAIMLADMAHISGLVAAGVIPSPFEYAD 250 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~----~~~vivD~a~~~g~~~~~~~~~~~~~~D 250 (359)
| +++++.+++ +|++|+++ ++| +|.+.|+++|.++|+++ |+++|+|++|+.+... +.... ++|
T Consensus 128 ------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~---~~d 195 (393)
T 1n8p_A 128 ------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNF---GAD 195 (393)
T ss_dssp ------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGG---TCS
T ss_pred ------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHc---CCe
Confidence 7 899999987 89999988 777 89999999999999999 9999999999877653 22222 489
Q ss_pred EEEeCCCCcCCCCC---ceEEEEeC
Q 018231 251 VVTTTTHKSLRGPR---GAMIFFRK 272 (359)
Q Consensus 251 ~v~~s~~K~l~gp~---gG~l~~~~ 272 (359)
++++|+||+++++. ||++++++
T Consensus 196 i~~~S~sK~~g~~G~rigG~~~~~~ 220 (393)
T 1n8p_A 196 IVVHSATKYINGHSDVVLGVLATNN 220 (393)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESC
T ss_pred EEEEECcccccCCCCceeEEEEeCC
Confidence 99999999886543 38888864
No 167
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.74 E-value=7.9e-18 Score=163.95 Aligned_cols=156 Identities=17% Similarity=0.172 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEec
Q 018231 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (359)
Q Consensus 94 ~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (359)
.+.+++++++++|.+. .+++++|+.++..++ .++++||+|+++++.|+++..... ..+...|.+++.++
T Consensus 135 ~~~l~~~la~~~g~~~-----~i~~~sGt~al~~~l-~~~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v~- 203 (464)
T 1ibj_A 135 RDALESLLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSGVVVKRVN- 203 (464)
T ss_dssp HHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHH-TTSCTTCEEEEESSCCHHHHHHHH----HTSGGGTCEEEEEC-
T ss_pred HHHHHHHHHHHhCCCe-----EEEECCHHHHHHHHH-HHhCCCCEEEEECCCchhHHHHHH----HHHHHcCCEEEEeC-
Confidence 4457789999999762 366666655776555 478999999999987766532111 11234465555553
Q ss_pred ccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceE
Q 018231 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADV 251 (359)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (359)
.+ |+++|++.+++ ++++|+++ ++| +|.+.|+++|.++|++||+++|+|++|+.|....... . ++|+
T Consensus 204 -~~------d~~~l~~~i~~-~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~---~~di 271 (464)
T 1ibj_A 204 -TT------KLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-L---GADI 271 (464)
T ss_dssp -TT------SHHHHHHHCCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-T---TCSE
T ss_pred -CC------CHHHHHHHhcc-CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-c---CCEE
Confidence 32 89999999987 89999998 778 8999999999999999999999999998765421111 2 3899
Q ss_pred EEeCCCCcCCCCCc---eEEEEeC
Q 018231 252 VTTTTHKSLRGPRG---AMIFFRK 272 (359)
Q Consensus 252 v~~s~~K~l~gp~g---G~l~~~~ 272 (359)
+++|+||+|+||.| |++++++
T Consensus 272 v~~S~sK~~~g~~Gl~~G~l~~~~ 295 (464)
T 1ibj_A 272 VMHSATKFIAGHSDVMAGVLAVKG 295 (464)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECS
T ss_pred EEECCcccccCCCCCcEEEEEECh
Confidence 99999999987654 9999986
No 168
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.74 E-value=1.4e-17 Score=158.43 Aligned_cols=234 Identities=12% Similarity=0.082 Sum_probs=145.5
Q ss_pred CceeeCCC-----CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 48 GLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~~-----~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.+++..+. .++++.+++++.+.+.... ... ..|.. + ..+.++++++++++++++ +|++++|+
T Consensus 47 ~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~---~~~-~~~~~-~----~~~~l~~~la~~~~~~~~----~v~~~~gg 113 (395)
T 1vef_A 47 YIDCVGGYGVANLGHGNPEVVEAVKRQAETLM---AMP-QTLPT-P----MRGEFYRTLTAILPPELN----RVFPVNSG 113 (395)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC---CCC-TTSCC-H----HHHHHHHHHHHTSCTTEE----EEEEESSH
T ss_pred EEEccCccccccCCCCCHHHHHHHHHHHHhCC---CCc-cccCC-H----HHHHHHHHHHHhcCCCcC----EEEEcCcH
Confidence 45665442 2478999999999886521 111 11211 2 223466889999987553 59999988
Q ss_pred H-HHHHHHHhhc--CCCCeeeecCCCCCcccCccccccccceeeeeeeeE---EEecccCC-CCCCCCHHHHHHHhhhhC
Q 018231 123 P-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE---TMPYRLNE-STGYIDYDQLEKSATLFR 195 (359)
Q Consensus 123 ~-a~~~~~~al~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~-~~~~~d~e~l~~~i~~~~ 195 (359)
+ ++..++.++. .+||+|+++++.|++...... ...|.... .+|+..+. .-...|+++|++.+++ +
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~-------~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~-~ 185 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSL-------SVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE-E 185 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH-------HTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT-T
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhh-------hhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc-C
Confidence 8 8887777663 689999999876654322111 11121100 00100000 0002489999999986 8
Q ss_pred CcEEEEcCC-C-CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCCCCCC---CC-CceEEEeCCCCcCCCCCc
Q 018231 196 PKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FE-YADVVTTTTHKSLRGPRG 265 (359)
Q Consensus 196 ~k~v~l~~~-n-~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~---~~-~~D~v~~s~~K~l~gp~g 265 (359)
+++|+++++ | +|.+.+ +++|.++|++||+++|+|++|+ |....+. ..+ .. ..|++++ +|+|+++.+
T Consensus 186 ~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~-~~~~~~~~~~~d~~s~--sK~~~~g~~ 261 (395)
T 1vef_A 186 TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGK-RFAFEHFGIVPDILTL--AKALGGGVP 261 (395)
T ss_dssp EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSTHHHHTCCCSEEEE--CGGGGTTSS
T ss_pred EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCc-hhHhhhcCCCCCEEEE--cccccCCCc
Confidence 899888743 3 787776 9999999999999999999997 3221111 001 01 3687754 799976544
Q ss_pred -eEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 266 -AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 266 -G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
|++++++ ++.+.+.... .....+++....+++.++++.+.+
T Consensus 262 ~G~~~~~~--------------~~~~~l~~~~-~~~~~~~~~~~~~a~~~al~~~~~ 303 (395)
T 1vef_A 262 LGVAVMRE--------------EVARSMPKGG-HGTTFGGNPLAMAAGVAAIRYLER 303 (395)
T ss_dssp CEEEEEEH--------------HHHHTSCTTS-SCCSSTTCHHHHHHHHHHHHHHHH
T ss_pred eEEEEehH--------------HHHhhhccCC-cCCCcCCCHHHHHHHHHHHHHHHh
Confidence 9999987 4444443311 111235677788888888987764
No 169
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.74 E-value=1.9e-17 Score=158.88 Aligned_cols=153 Identities=13% Similarity=0.121 Sum_probs=115.0
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (359)
+++++++++|.+. +++++|++ ++..++.+++++||+|+++.++|++++.++... +...|.++..++ .
T Consensus 61 l~~~la~~~g~~~------~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~~~~~--~ 128 (412)
T 2cb1_A 61 LEERLKALEGALE------AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQV----LSLMGVTVRYVD--P 128 (412)
T ss_dssp HHHHHHHHHTCSE------EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHT----TTTTTCEEEEEC--S
T ss_pred HHHHHHHHhCCCc------EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHH----HHHcCCEEEEEC--C
Confidence 5588999999762 77777777 888899999999999999998887654432211 122354454443 2
Q ss_pred CCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEE
Q 018231 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (359)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (359)
|+++|++.+++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+......... ++|+++
T Consensus 129 -------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~---~~di~~ 197 (412)
T 2cb1_A 129 -------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAW---GAHVVV 197 (412)
T ss_dssp -------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGG---TCSEEE
T ss_pred -------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCcccc---CCeEEE
Confidence 48999999987 89999987 777 899999999999999999999999999876222111112 489999
Q ss_pred eCCCCcCCCCCc--eEEEEeC
Q 018231 254 TTTHKSLRGPRG--AMIFFRK 272 (359)
Q Consensus 254 ~s~~K~l~gp~g--G~l~~~~ 272 (359)
+|+||++++|.+ |++++.+
T Consensus 198 ~S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 198 ESLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp EETTTTTTCSSCCCCEEEEEC
T ss_pred ECCcccccCCCCcEEEEEEec
Confidence 999999988765 6555544
No 170
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.74 E-value=4.2e-18 Score=163.08 Aligned_cols=226 Identities=12% Similarity=0.092 Sum_probs=135.5
Q ss_pred HHHHHHHHHH--HhhcCceeeCCCCCCcHH----HHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCC
Q 018231 34 IADIIEHEKA--RQWKGLELIPSENFTSVS----VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL 107 (359)
Q Consensus 34 ~~~~~~~~~~--~~~~~i~l~~~~~~~~~~----v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~ 107 (359)
+...+.+... ...+.|+|..+.+...+. +.+++.+.+.+... ......|+...+..++++++.+++.+.+|.
T Consensus 17 ~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~ 94 (417)
T 3g7q_A 17 ITRLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKA--ADALCNYDGPQGKTALLNALAVLLRETLGW 94 (417)
T ss_dssp HHHHHHHHHC-----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHH--HHHHHSTTCTTSHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcc--cceeeccCCCCCcHHHHHHHHHHHHHHhCC
Confidence 4444444322 224679998877665444 44455544432100 000012344456778887788888777775
Q ss_pred --CCCCCceeEEECCChH-HHHHHHHhhcCCCC-----eeeec-CCCCCcccCccccccccceeeeeeeeEEEecccCCC
Q 018231 108 --DPEKWGVNVQSLSGSP-SNFQVYTALLKPHD-----RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (359)
Q Consensus 108 --~~~~~~~~v~~tsG~~-a~~~~~~al~~~Gd-----~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (359)
+++ +|++|+|++ ++..++.+++++|| +|+++ +++|+++....... ....+.....++++.+..
T Consensus 95 ~~~~~----~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 166 (417)
T 3g7q_A 95 DIEPQ----NIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLED----DLFVSARPNIELLPEGQF 166 (417)
T ss_dssp CCCGG----GEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC---------CCEEECCCEEEEEGGGEE
T ss_pred CCCcc----cEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccch----hhhccccCcccccCCccc
Confidence 443 599999999 88889999999988 89987 76665543321100 011222233333333212
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccccccCCCC-CC-CCCceE
Q 018231 179 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SP-FEYADV 251 (359)
Q Consensus 179 ~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~-~~-~~~~D~ 251 (359)
++.+|+++++ +++ ++++++++ ++| +|...+ +++|.++|++||+++|+|++|+.......... .+ ..+.++
T Consensus 167 ~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i 243 (417)
T 3g7q_A 167 KYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNII 243 (417)
T ss_dssp EEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEE
T ss_pred ccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEE
Confidence 3568999888 665 78998887 888 897766 88899999999999999999864221111101 01 124789
Q ss_pred EEeCCCCcCC-CCCceEEEEeC
Q 018231 252 VTTTTHKSLR-GPRGAMIFFRK 272 (359)
Q Consensus 252 v~~s~~K~l~-gp~gG~l~~~~ 272 (359)
++.|++|++. |.+.|+++.++
T Consensus 244 ~~~s~sK~~~~G~r~G~~~~~~ 265 (417)
T 3g7q_A 244 LCMSLSKLGLPGSRCGIIIAND 265 (417)
T ss_dssp EEEESGGGTCTTSCCEEEECCH
T ss_pred EEEechhccCCCcceEEEEeCH
Confidence 9999999421 22238888866
No 171
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.74 E-value=1.2e-16 Score=153.08 Aligned_cols=225 Identities=13% Similarity=0.097 Sum_probs=146.8
Q ss_pred cccccChH-HHHHHHHHHHH-hhcCceeeCCC-------CCCcHHHHHHHHhhh-hccCCCCCCCCcccCCchhHHHHHH
Q 018231 26 PLEVVDPE-IADIIEHEKAR-QWKGLELIPSE-------NFTSVSVMQAVGSVM-TNKYSEGYPGARYYGGNEYIDMAES 95 (359)
Q Consensus 26 ~~~~~~~~-~~~~~~~~~~~-~~~~i~l~~~~-------~~~~~~v~~al~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~ 95 (359)
.++.+.++ ++.......+. ..+.|+|..|+ .++++.|.+++. .+ ......+ |....+..++++
T Consensus 7 ~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~------Y~~~~G~~~lr~ 79 (405)
T 3k7y_A 7 SLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKP------YLLGNGTEDFST 79 (405)
T ss_dssp GCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCC------CCTTSSCHHHHH
T ss_pred cCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCC------CCCCCCcHHHHH
Confidence 44556665 45555443322 23679998764 235788888876 43 2211112 333456778888
Q ss_pred HHHHHHHHHcCCC--CCCCceeEEECCChH-HHHHHHHhhcC--CCCeeeecCCCCCcccCccccccccceeeeeeeeEE
Q 018231 96 LCQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (359)
Q Consensus 96 ~~~~~~a~~~g~~--~~~~~~~v~~tsG~~-a~~~~~~al~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (359)
++.+++.+..+.. ++. .++++|+|++ ++..++.++++ | |+|++++ |.|..+...+...|.+++.
T Consensus 80 aia~~~~~~~~~~~~~~~--i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~--------P~y~~~~~~~~~~g~~~~~ 148 (405)
T 3k7y_A 80 LTQNLIFGNNSKYIEDKK--ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTN--------PPYINHVNMIESRGFNLKY 148 (405)
T ss_dssp HHHHHHHCSSCTTTTTTC--EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEES--------SCCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHcCCCCccccccc--eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeC--------CCCHhHHHHHHHcCCeEEE
Confidence 8888876555432 222 2468999999 88878888877 8 9999999 5555555456677877766
Q ss_pred EecccCCCCCCCCHHHHHHHhhhh-CCcEEEEc-C-CC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccccCCCC
Q 018231 171 MPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-A-SA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (359)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~~-~~k~v~l~-~-~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~ 243 (359)
+++. +++++.+|++++++.+++. ++++++++ + +| ||... .+++|+++|++|++++|+|+++.. ....+...
T Consensus 149 v~~~-~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~-l~~~~~~~ 226 (405)
T 3k7y_A 149 INFF-DYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQG-FGHTNLEE 226 (405)
T ss_dssp ECCE-ETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTT-TSSSSTTG
T ss_pred Eecc-ccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCccc-ccCCCccc
Confidence 6542 3346889999999999752 46788887 4 67 88554 577888999999999999999742 22111000
Q ss_pred --C------CCCCceEEEeCCCCcCC--CCCceEEEE
Q 018231 244 --S------PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (359)
Q Consensus 244 --~------~~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (359)
. ....--+++.|++|+|+ |.+-|++++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 227 DVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp GGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred chHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 0 00013488899999874 555599865
No 172
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.74 E-value=6.5e-18 Score=162.35 Aligned_cols=155 Identities=19% Similarity=0.203 Sum_probs=117.1
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++++++++|.+. .+++++|+.++..++.+++++||+|+++++.|++...... ......|.++..++ .+
T Consensus 86 l~~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~g~~~~~v~--~~ 154 (414)
T 3ndn_A 86 FEERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCS----EILPRWGVQTVFVD--GD 154 (414)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHH----THHHHTTCEEEEEC--TT
T ss_pred HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHH----HHHHHcCcEEEEeC--CC
Confidence 5588999999753 3555555448887899999999999999987776533221 01122455554453 33
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEe
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (359)
|+++|++++++ +|++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+...... .. ++|+++.
T Consensus 155 ------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~div~~ 223 (414)
T 3ndn_A 155 ------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PL---GVDVVVY 223 (414)
T ss_dssp ------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GG---TCSEEEE
T ss_pred ------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCCeEec
Confidence 89999999987 89999998 777 899999999999999999999999999876543222 22 4899999
Q ss_pred CCCCcCCCCC---ceEEEEeCC
Q 018231 255 TTHKSLRGPR---GAMIFFRKG 273 (359)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~ 273 (359)
|++|+|+++. +|+++++++
T Consensus 224 S~sK~l~~~G~~~~G~vv~~~~ 245 (414)
T 3ndn_A 224 SGTKHIDGQGRVLGGAILGDRE 245 (414)
T ss_dssp ETTTTTTCSSCCCCEEEEECHH
T ss_pred cCCccccCCCCceEEEEEECHH
Confidence 9999997643 699888773
No 173
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.74 E-value=1.4e-16 Score=153.41 Aligned_cols=246 Identities=11% Similarity=0.003 Sum_probs=148.2
Q ss_pred CceeeCCCC-----CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 48 GLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~~~-----~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.+++.++.. ..+|.|++++.+.+.... .++.. .|.. . ....+++.++++++++++ +|++|+|+
T Consensus 45 ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--~~~~~-~~~~-~----~~~~l~~~la~~~~~~~~----~v~~~~gg 112 (429)
T 1s0a_A 45 LVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--HVMFG-GITH-A----PAIELCRKLVAMTPQPLE----CVFLADSG 112 (429)
T ss_dssp EEESSTTTTTCTTCBSCHHHHHHHHHHHHHCS--CCCCS-SEEC-H----HHHHHHHHHHHHSCTTCC----EEEEESSH
T ss_pred EEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--ccccc-ccCC-H----HHHHHHHHHHHhCCCCCC----EEEEeCCH
Confidence 466665542 258999999999886522 11111 1111 1 122355789999987664 49999999
Q ss_pred H-HHHHHHHhhc---C----CCCeeeecCCCCCcccCccccc------cccceeeeeeeeEEEecccC--CCCC-CCCHH
Q 018231 123 P-SNFQVYTALL---K----PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLN--ESTG-YIDYD 185 (359)
Q Consensus 123 ~-a~~~~~~al~---~----~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~--~~~~-~~d~e 185 (359)
+ ++..++.++. + |||+|+++++.|++........ ++.........+..++++.. .+.+ .+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 9 8887776543 2 6999999997766532111000 00000000011334543321 0123 58999
Q ss_pred HHHHHhhh--hCCcEEEEcCC--C-CCChhh----HHHHHHHHHHcCCEEEEecccc-cccccc--CCCCCCCCCceEEE
Q 018231 186 QLEKSATL--FRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVT 253 (359)
Q Consensus 186 ~l~~~i~~--~~~k~v~l~~~--n-~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~ 253 (359)
+|++.+++ .++++|+++|. | +|.+.+ +++|.++|++||+++|+|++|+ +|.... ...... ...|+++
T Consensus 193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~-~~~d~~t 271 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE-IAPDILC 271 (429)
T ss_dssp HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEE
T ss_pred HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcC-CCCCEEE
Confidence 99999874 25677777765 5 786665 9999999999999999999996 432211 011001 1268887
Q ss_pred eCCCCcCCCC--CceEEEEeCCcchhccCCcchhhhHHHhhcccc----CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 254 TTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV----FPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 254 ~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
+| |+|+++ +.|++++++ ++.+.+.... ......++|.++.+|+.+|++.+.++
T Consensus 272 ~s--K~l~~G~~~iG~~~~~~--------------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~ 330 (429)
T 1s0a_A 272 LG--KALTGGTMTLSATLTTR--------------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESG 330 (429)
T ss_dssp EC--GGGGTSSSCCEEEEECH--------------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTC
T ss_pred ec--ccccCCCccceEEEeCH--------------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 66 998764 349999877 4444443210 01112345788888888999887764
No 174
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.73 E-value=1.9e-17 Score=157.35 Aligned_cols=223 Identities=10% Similarity=0.028 Sum_probs=140.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCC-
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP- 135 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~- 135 (359)
.+|.+.+++.+.+.+ +..+. . .+. .+...+ +++++++++|.+ .+++++|++ ++..++.++..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~~--~-~~~-~~~~~~----l~~~la~~~g~~------~v~~~~~gt~a~~~al~~~~~~~ 117 (392)
T 3ruy_A 53 RHPKIINALIDQANR-VTLTS--R-AFH-SDQLGP----WYEKVAKLTNKE------MVLPMNTGAEAVETAIKTARRWA 117 (392)
T ss_dssp TCHHHHHHHHHHHTT-CSCCC--T-TSE-ETTHHH----HHHHHHHHHTCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccccc--c-ccC-CHHHHH----HHHHHHHhcCCC------EEEEeCcHHHHHHHHHHHHHHhh
Confidence 579999999998765 21111 1 111 122333 558888888833 488888888 888777766543
Q ss_pred ---------CCeeeecCCCCCcccCccccc-----cccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 136 ---------HDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 136 ---------Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
||+|++..+.|.+........ +..........+..+ +.+ |+++|++.+++ ++++|++
T Consensus 118 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------d~~~l~~~l~~-~~~~v~~ 188 (392)
T 3ruy_A 118 YDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI--PYG------DLEALKAAITP-NTAAFIL 188 (392)
T ss_dssp HHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE--CTT------CHHHHHHHCCT-TEEEEEE
T ss_pred hhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee--Ccc------cHHHHHHHhcc-CeEEEEE
Confidence 789999998886543211100 000000000011112 122 89999999986 8999999
Q ss_pred c-CCC-CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccCCCCCCCC-CceEEEeCCCCcCCC--CCceEEEEe
Q 018231 202 G-ASA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLRG--PRGAMIFFR 271 (359)
Q Consensus 202 ~-~~n-~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~~s~~K~l~g--p~gG~l~~~ 271 (359)
+ ++| +|.+.| +++|.++|++||+++|+|++|+ ++............ ..|++++| |+++| .++|+++++
T Consensus 189 ~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~ 266 (392)
T 3ruy_A 189 EPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPISCAAAN 266 (392)
T ss_dssp CSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEEC
T ss_pred eCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEc--hhhhCChhhhEEEEEC
Confidence 8 666 888887 9999999999999999999995 22211000000001 26888876 99877 567999987
Q ss_pred CCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 272 KGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 272 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+ ++.+.+.... .+...+++....+++.++++.+..
T Consensus 267 ~--------------~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~ 301 (392)
T 3ruy_A 267 R--------------DILGVFEPGS-HGSTFGGNPLACAVSIAALEVLEE 301 (392)
T ss_dssp H--------------HHHTTCCTTS-SCCSSTTCHHHHHHHHHHHHHHHH
T ss_pred H--------------HHHhhhccCC-cCCCCCCCHHHHHHHHHHHHHHHh
Confidence 7 4454443321 112246677888888888987754
No 175
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.73 E-value=1.8e-17 Score=154.34 Aligned_cols=215 Identities=13% Similarity=0.041 Sum_probs=145.6
Q ss_pred cCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC---CCCCCCceeEEECCC
Q 018231 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g---~~~~~~~~~v~~tsG 121 (359)
+.|+|..++++ +++.+++++.+.+......+|+ . ....+ +++.++++++ ++++ +|++|+|
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~-~~~~~----lr~~la~~~~~~~~~~~----~v~~~~G 84 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYY------D-SPDEE----LIEKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCC------C-SSCHH----HHHHHHHHHTCSSCCGG----GEEEESS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCC------C-CchHH----HHHHHHHHcCCCCCCHH----HEEEcCC
Confidence 46899888773 5899999999877321111222 1 12344 4477788888 7664 4999999
Q ss_pred hH-HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE
Q 018231 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (359)
Q Consensus 122 ~~-a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~ 200 (359)
++ ++..++.++ ||+|+++ +.|.++.. .+...|.++..+ +.+ +++.+|++++ + ++++|+
T Consensus 85 ~~~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l-----~-~~~~v~ 143 (335)
T 1uu1_A 85 ADEIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGAKFLEV--PLT-KDLRIPEVNV-----G-EGDVVF 143 (335)
T ss_dssp HHHHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTCEEEEC--CCC-TTSCCCCCCC-----C-TTEEEE
T ss_pred hHHHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCCeEEEe--ccC-CCCCCCHHHc-----C-CCCEEE
Confidence 99 777677777 9999988 87765432 233446555444 444 4567788776 3 789998
Q ss_pred Ec-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccc--cC-CCCCCCCCceEEEeCCCCcCC--CCCceEEEEeCC
Q 018231 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA--AG-VIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKG 273 (359)
Q Consensus 201 l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~--~~-~~~~~~~~~D~v~~s~~K~l~--gp~gG~l~~~~~ 273 (359)
++ |+| +|.+.+.+++.++++..| ++|+|++|+..... .. .... +.+++++|++|+++ |.+.|++++++
T Consensus 144 l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~G~r~G~~~~~~- 218 (335)
T 1uu1_A 144 IPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKY---ENLAVIRTFSKAFSLAAQRVGYVVASE- 218 (335)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTC---SSEEEEEESTTTTTCGGGCCEEEEECH-
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhC---CCEEEEecchhhcCCcccCeEEEEeCH-
Confidence 77 888 899999999999999889 99999999742211 11 1112 36899999999884 22339999966
Q ss_pred cchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 274 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.+.+.....+ .+++.+...++.++|+.
T Consensus 219 -------------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~ 247 (335)
T 1uu1_A 219 -------------KFIDAYNRVRLP---FNVSYVSQMFAKVALDH 247 (335)
T ss_dssp -------------HHHHHHHHHSCT---TCSCHHHHHHHHHHHHT
T ss_pred -------------HHHHHHHHhcCC---CCcCHHHHHHHHHHhCC
Confidence 455544433221 36777777777777764
No 176
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.73 E-value=8e-18 Score=162.33 Aligned_cols=155 Identities=16% Similarity=0.107 Sum_probs=119.5
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++++++++|.+. .++++||+.++..++.++++|||+|+++++.|++...... ..+...|.+++.++ .+
T Consensus 87 le~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~~~~v~--~~ 155 (430)
T 3ri6_A 87 LEQRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQ----KTLPSFGIEVRFVD--VM 155 (430)
T ss_dssp HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----THHHHTTCEEEEEC--TT
T ss_pred HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCCEEEEeC--CC
Confidence 4588999999864 4888888778887899999999999999988776543221 11223465554443 33
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEe
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (359)
|+++|++++++ +|++|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+... ..... ++|+++.
T Consensus 156 ------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-~~~~~---g~div~~ 224 (430)
T 3ri6_A 156 ------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-EAKRL---GVDIEVL 224 (430)
T ss_dssp ------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-CGGGG---TCSEEEE
T ss_pred ------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChHHc---CCEEEEE
Confidence 89999999987 89999988 888 899999999999999999999999999876552 11222 4899999
Q ss_pred CCCCcCCCC---CceEEEEeCC
Q 018231 255 TTHKSLRGP---RGAMIFFRKG 273 (359)
Q Consensus 255 s~~K~l~gp---~gG~l~~~~~ 273 (359)
|++|+|+|+ .||+++++..
T Consensus 225 S~sK~l~g~g~~~gG~vv~~~~ 246 (430)
T 3ri6_A 225 SSTKFISGGGTSVGGVLIDHGL 246 (430)
T ss_dssp ECCCEEETTEEECCEEEEECSC
T ss_pred CCcccccCCCCceEEEEEECCh
Confidence 999999876 5577776543
No 177
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.73 E-value=6.4e-17 Score=156.35 Aligned_cols=188 Identities=18% Similarity=0.239 Sum_probs=134.1
Q ss_pred CCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhh-
Q 018231 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL- 132 (359)
Q Consensus 54 ~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al- 132 (359)
+.+.+++++++++.+.+.+.+ ++.+ ....+ +++.+++++|++. .|++++|+.++..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~~~----l~~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW--------LTTG-RFNDA----FEKKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHHHH----HHHHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 445567899999988876521 1222 33343 5588899999863 366666655888788888
Q ss_pred --------cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCC
Q 018231 133 --------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (359)
Q Consensus 133 --------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~ 204 (359)
+++||+|+++.++|+++..+ +...|.+++.+ +.+++++.+|++++++.+++ ++++|+++.
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~~--------~~~~g~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~- 166 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVNP--------TIQNGLIPVFV--DVDIPTYNVNASLIEAAVSD-KTKAIMIAH- 166 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHHH--------HHHTTCEEEEC--CEETTTTEECGGGHHHHCCT-TEEEEEEEC-
T ss_pred hcccccccCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--eccCccCCcCHHHHHHhcCC-CCeEEEEeC-
Confidence 88999999999888776542 23346555444 45534688999999999987 899988863
Q ss_pred CCCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCC--CCcCCCCCceEEEEeCC
Q 018231 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKG 273 (359)
Q Consensus 205 n~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~--~K~l~gp~gG~l~~~~~ 273 (359)
++|...++++|.++|+++|+++|+|++|+.|..+ +....+ ...|++++|+ .|.+.++.||+++++++
T Consensus 167 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 167 TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAG-TFGDIGTVSFYPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETT-SSSSEEEEECSTTSSSCCSSCEEEEESCH
T ss_pred CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCeecc-cccCEEEEECcCCcCCCCCCeEEEEeCCH
Confidence 4566689999999999999999999999988766 322111 1257866664 45577777798888764
No 178
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.73 E-value=5.4e-17 Score=151.91 Aligned_cols=217 Identities=12% Similarity=0.058 Sum_probs=145.7
Q ss_pred hcCceeeCCCCC--CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH
Q 018231 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (359)
Q Consensus 46 ~~~i~l~~~~~~--~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~ 123 (359)
+..|+|..++++ +++.+++++.+.+.... +|+.. .. .+ +++++++++|+++++ |++|+|++
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~~----lr~~la~~~~~~~~~----i~~t~g~~ 77 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIR--HYPEP------DA-GT----LRQMLAKRNSVDNNA----ILVTNGPT 77 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGG--SCCCT------TC-HH----HHHHHHHHTTCCGGG----EEEESHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHh--cCCCC------cH-HH----HHHHHHHHhCcCHHH----EEEcCCHH
Confidence 467999888764 58999999988774322 33322 22 33 558899999987754 99999999
Q ss_pred -HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEeccc-CCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL-NESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 124 -a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
++..++.++. ||+|+++.+.|.++. ..+...|.++..++ . + +...+++ + ++++|++
T Consensus 78 ~al~~~~~~l~--gd~Vi~~~p~~~~~~--------~~~~~~g~~~~~v~--~~~-~~~~~~~--------~-~~~~v~i 135 (350)
T 3fkd_A 78 AAFYQIAQAFR--GSRSLIAIPSFAEYE--------DACRMYEHEVCFYP--SNE-DIGEADF--------S-NMDFCWL 135 (350)
T ss_dssp HHHHHHHHHTT--TCEEEEEESCCHHHH--------HHHHHTTCEEEEEE--TTS-CGGGSCC--------T-TCSEEEE
T ss_pred HHHHHHHHHHC--CCEEEEeCCCcHHHH--------HHHHHcCCeEEEEe--cCC-ccccCcc--------C-CCCEEEE
Confidence 8887778777 999999996655432 24445576665565 4 3 2223333 3 7999888
Q ss_pred c-CCC-CCChhhHHHHHHHHHHcC-CEEEEeccccccccccCCCCCC--CCCceEEEeCCCCcCC--CCCceEEEEeCCc
Q 018231 202 G-ASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (359)
Q Consensus 202 ~-~~n-~g~~~~l~~i~~la~~~~-~~vivD~a~~~g~~~~~~~~~~--~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (359)
+ ++| +|.+.+++++.++++.++ .++|+|++|+............ ..+.++++.|++|+++ |.+.|++++++
T Consensus 136 ~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~-- 213 (350)
T 3fkd_A 136 CNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK-- 213 (350)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--
T ss_pred eCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH--
Confidence 7 888 999999999999988875 7999999986433221110001 1135699999999875 33349999865
Q ss_pred chhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 275 KEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 275 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++.+.+.... ...+++.....++.++|+.
T Consensus 214 ------------~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~ 242 (350)
T 3fkd_A 214 ------------DFMKRVAAFS---TPWAVNALAIEAAKFILIH 242 (350)
T ss_dssp ------------HHHHHHHTTC---CTTCSCHHHHHHHHHHHHC
T ss_pred ------------HHHHHHHHhC---CCCCCCHHHHHHHHHHHhC
Confidence 5555554332 1246677777777777764
No 179
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.73 E-value=5.1e-17 Score=154.45 Aligned_cols=204 Identities=12% Similarity=0.062 Sum_probs=130.2
Q ss_pred cCceeeCCC---C----CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeEE
Q 018231 47 KGLELIPSE---N----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQ 117 (359)
Q Consensus 47 ~~i~l~~~~---~----~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g--~~~~~~~~~v~ 117 (359)
+.|+|..+. + ++++.+.+++.+.+.+....+| +...+..++++++.+++....+ ++++ +|+
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~la~~~~~~~~~~~~~~----~v~ 96 (396)
T 2q7w_A 27 GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNY------LGIDGIPEFGRCTQELLFGKGSALINDK----RAR 96 (396)
T ss_dssp -CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCC------CCTTCCHHHHHHHHHHHHCTTCHHHHTT----CEE
T ss_pred CceecccccccCCCCCccCcHHHHHHHHhhcCcccccCC------CCCCCCHHHHHHHHHHHhcCCCCccccc----cEE
Confidence 568888776 1 4569999999887654211122 2223456666545454433222 2344 387
Q ss_pred E--CCChH-HHHHHHHhh--cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhh
Q 018231 118 S--LSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (359)
Q Consensus 118 ~--tsG~~-a~~~~~~al--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (359)
+ |+|++ ++..++.++ +.+||+|+++.+.|.++. ..+...|.++..+++... +++.+|++++++.++
T Consensus 97 ~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~ 167 (396)
T 2q7w_A 97 TAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK--------SVFNSAGLEVREYAYYDA-ENHTLDFDALINSLN 167 (396)
T ss_dssp EEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH--------HHHHHTTCEEEEEECEET-TTTEECHHHHHHHHT
T ss_pred EEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHH--------HHHHHcCCceEEEecccC-CCCCcCHHHHHHHHH
Confidence 7 99988 877676655 579999999996665542 234445666655654322 457889999999997
Q ss_pred hh--CCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEecccccccccc-----CCCCCC-CCCceEEEeCCCCc
Q 018231 193 LF--RPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA-----GVIPSP-FEYADVVTTTTHKS 259 (359)
Q Consensus 193 ~~--~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~~-----~~~~~~-~~~~D~v~~s~~K~ 259 (359)
+. ++++++++ ++| ||... ++++|.++|++||+++|+|++|+...... ...... ....++++.|++|+
T Consensus 168 ~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 247 (396)
T 2q7w_A 168 EAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXN 247 (396)
T ss_dssp TCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTT
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccc
Confidence 52 35677767 777 88654 56789999999999999999986432210 010000 00146889999998
Q ss_pred CCCCCc---eEEEE
Q 018231 260 LRGPRG---AMIFF 270 (359)
Q Consensus 260 l~gp~g---G~l~~ 270 (359)
++ +.| |++++
T Consensus 248 ~~-~~G~riG~~~~ 260 (396)
T 2q7w_A 248 FG-LYNERVGACTL 260 (396)
T ss_dssp TT-CGGGCCEEEEE
T ss_pred cc-ccccccceEEE
Confidence 74 334 88887
No 180
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.72 E-value=4.7e-17 Score=158.38 Aligned_cols=187 Identities=13% Similarity=0.144 Sum_probs=120.1
Q ss_pred HHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC----
Q 018231 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK---- 134 (359)
Q Consensus 60 ~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~---- 134 (359)
+.+.+++.+.+.... ..|+......++ +++++++++.+ .|++|+|++ ++..++.++++
T Consensus 55 ~~v~~a~~~~~~~~~-------~~y~~~~~~~~l----~~~la~~~~~~------~v~~t~ggt~A~~~al~~~~~~~~~ 117 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-------EAYAGSRNYYDL----KDKAKELFNYD------YIIPAHQGRGAENILFPVLLKYKQK 117 (467)
T ss_dssp CCEEHHHHHHHHTCC-------CCSSSCHHHHHH----HHHHHHHHCCC------EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-------cccccCccHHHH----HHHHHHHcCCC------cEEEcCCcHHHHHHHHHHHHHhhcc
Confidence 567777766654311 112333444444 47888888874 389998888 88888888888
Q ss_pred CCCe---eeecCCCCCcccCccccccccceeeeeeeeEEEeccc--CC-----CCCCCCHHHHHHHhhhh---CCcEEEE
Q 018231 135 PHDR---IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL--NE-----STGYIDYDQLEKSATLF---RPKLIVA 201 (359)
Q Consensus 135 ~Gd~---Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~-----~~~~~d~e~l~~~i~~~---~~k~v~l 201 (359)
+||+ |++.. .|.+. +...+...|..+..++... +. .++.+|+++|++.+++. ++++|++
T Consensus 118 ~Gd~~~~viv~~-~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~ 189 (467)
T 1ax4_A 118 EGKAKNPVFISN-FHFDT-------TAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVS 189 (467)
T ss_dssp TTCCSSCEEEES-SCCHH-------HHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEE
T ss_pred CCCccceEEEec-cccch-------hhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEE
Confidence 9998 88873 33111 1112223344443333211 11 13578999999999852 5889988
Q ss_pred c-CCC-C-CCh---hhHHHHHHHHHHcCCEEEEeccccc-ccc--------ccCCCCCCC-----CCceEEEeCCCCcCC
Q 018231 202 G-ASA-Y-ARL---YDYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSLR 261 (359)
Q Consensus 202 ~-~~n-~-g~~---~~l~~i~~la~~~~~~vivD~a~~~-g~~--------~~~~~~~~~-----~~~D~v~~s~~K~l~ 261 (359)
+ ++| + |.+ .++++|+++|++||+++|+|++|+. +.. ..+.....+ ..+|++++|+||+++
T Consensus 190 ~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g 269 (467)
T 1ax4_A 190 TVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPL 269 (467)
T ss_dssp ESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTC
T ss_pred eccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCC
Confidence 7 666 6 543 5688999999999999999999876 222 111110000 126899999999987
Q ss_pred CCCceEEEEe
Q 018231 262 GPRGAMIFFR 271 (359)
Q Consensus 262 gp~gG~l~~~ 271 (359)
.|.||+++.+
T Consensus 270 ~~~Gg~~~~~ 279 (467)
T 1ax4_A 270 LNIGGLVAIR 279 (467)
T ss_dssp CSSCEEEEES
T ss_pred CCcceEEEeC
Confidence 6657888887
No 181
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.72 E-value=1.6e-17 Score=155.84 Aligned_cols=197 Identities=14% Similarity=0.100 Sum_probs=125.5
Q ss_pred eeeCCCCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHH
Q 018231 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVY 129 (359)
Q Consensus 50 ~l~~~~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~ 129 (359)
-|..+.++..+++++++.+.... ..+...|+......+++ +++++++|.+. .+++++|+.++..++
T Consensus 14 ~l~~~~~p~~~~~~~~~~~~~~~-----~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~al 79 (357)
T 3lws_A 14 GQISGHGKRNVGVLKTAFAAVAD-----EMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVAL 79 (357)
T ss_dssp EESSBSSCCBHHHHHHHHTTSCT-----TCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHhhc-----ccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHH
Confidence 35556667666666665543211 11112344334455554 78888999854 477777766877788
Q ss_pred HhhcCCCC--eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-
Q 018231 130 TALLKPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (359)
Q Consensus 130 ~al~~~Gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n- 205 (359)
.+++.+|| .|++.+..|.+.+.... .....|..+..+ +. +++.+|+++|+++ . ++++++++ ++|
T Consensus 80 ~~~~~~gd~~~vi~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~--~~~~~d~~~l~~~--~-~~~~v~~~~p~np 147 (357)
T 3lws_A 80 RIWSDETDNRTVAYHPLCHLEIHEQDG-----LKELHPIETILV--GA--ADRLMTLDEIKAL--P-DIACLLLELPQRE 147 (357)
T ss_dssp HHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHSSCEEEEC--SC--TTSCCCHHHHHTC--C-SCSEEEEESSBGG
T ss_pred HHHhhcCCCcEEEecccceeeeeccch-----hhhccCcEEEEe--cC--CCCCcCHHHHhcC--c-CcceEEEEccccc
Confidence 88889998 56665544433322110 122335444333 32 4567999999887 3 48999888 776
Q ss_pred C-CChh---hHHHHHHHHHHcCCEEEEeccccccccc-cCCCCCCC-CCceEEEeCCCCcCCCCCceEEEEeC
Q 018231 206 Y-ARLY---DYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 206 ~-g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (359)
+ |.+. ++++|.++|++||++||+|++|..+... .+.....+ ...|++++|+||+|+||.||+++.++
T Consensus 148 ~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~ 220 (357)
T 3lws_A 148 IGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA 220 (357)
T ss_dssp GTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH
T ss_pred CCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH
Confidence 5 7554 5889999999999999999998632221 11100000 13789999999999888888888876
No 182
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.72 E-value=9.3e-18 Score=159.93 Aligned_cols=154 Identities=15% Similarity=0.110 Sum_probs=118.2
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++++++++|.+. .++++||+.++..++.+++++||+|+++.+.|++....... .+...|.+++.++ .
T Consensus 64 l~~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v~--~- 131 (389)
T 3acz_A 64 FEEMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTH----WLPRFGIEVDLID--T- 131 (389)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHH----HHHHTTCEEEEEC--T-
T ss_pred HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHH----HHHHcCCEEEEEC--C-
Confidence 5588999999862 47777777688878888899999999999888765433211 0223455554453 2
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEe
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (359)
.|++++++.+++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+.....+. . ++|++++
T Consensus 132 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~-~---~~di~~~ 201 (389)
T 3acz_A 132 -----SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLE-L---GADIALH 201 (389)
T ss_dssp -----TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGG-T---TCSEEEE
T ss_pred -----CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccc-c---CCeEEEE
Confidence 389999999987 89999987 777 8999999999999999999999999998665321111 2 4899999
Q ss_pred CCCCcCCCCCc---eEEEEeC
Q 018231 255 TTHKSLRGPRG---AMIFFRK 272 (359)
Q Consensus 255 s~~K~l~gp~g---G~l~~~~ 272 (359)
|+||++++|.+ |++++++
T Consensus 202 S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 202 SVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp ETTTTTTCSSCCCCEEEEESS
T ss_pred CChhhccCCCCceeEEEEECc
Confidence 99999987764 8888887
No 183
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.72 E-value=8.7e-17 Score=156.05 Aligned_cols=192 Identities=13% Similarity=0.099 Sum_probs=124.9
Q ss_pred ceeeCCCC--CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH
Q 018231 49 LELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (359)
Q Consensus 49 i~l~~~~~--~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~ 125 (359)
+++.++.+ ++++.+.+++... .. .|.......++ ++.+++++|.+. +++++|++ ++
T Consensus 45 lD~~~~~~~~~~~~~~~~a~~~~-~~----------~y~~~~~~~~l----~~~la~~~~~~~------~~~~~~gt~a~ 103 (456)
T 2ez2_A 45 IDLLTDSGTNAMSDKQWAGMMMG-DE----------AYAGSENFYHL----ERTVQELFGFKH------IVPTHQGRGAE 103 (456)
T ss_dssp EECSCSSSCCCCCHHHHHHHTTC-CC----------CSSSCHHHHHH----HHHHHHHHCCSE------EEEESSHHHHH
T ss_pred eeeccccCCccCCHHHHHHhhcc-hh----------hcccChhHHHH----HHHHHHHhCCCc------EEEeCCcHHHH
Confidence 35544443 4567777777621 11 12222444544 477888888752 77777777 88
Q ss_pred HHHHHhhcCCCCeeeecCCCC-CcccCccccccccceeeeeeeeEEEecccC--CC-----CCCCCHHHHHHHhhhhCC-
Q 018231 126 FQVYTALLKPHDRIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYRLN--ES-----TGYIDYDQLEKSATLFRP- 196 (359)
Q Consensus 126 ~~~~~al~~~Gd~Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~-----~~~~d~e~l~~~i~~~~~- 196 (359)
..++.++++||| +++++.| +++. ..+...|.++..++++.+ ++ ++.+|+++|++++++ ++
T Consensus 104 ~~al~~l~~~gd--i~~~~~~~~~~~--------~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~ 172 (456)
T 2ez2_A 104 NLLSQLAIKPGQ--YVAGNMYFTTTR--------YHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGA 172 (456)
T ss_dssp HHHHHHHCCTTC--EEEESSCCHHHH--------HHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCG
T ss_pred HHHHHHhCCCCC--EeccccccchhH--------HHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh-ccc
Confidence 888899999999 6666555 3321 133455666655543311 11 367899999999987 55
Q ss_pred ---cEEEEc-CCC--CCChhh---HHHHHHHHHHcCCEEEEecccccc---------ccccCCCCC-----CCCCceEEE
Q 018231 197 ---KLIVAG-ASA--YARLYD---YERIRKVCNKQKAIMLADMAHISG---------LVAAGVIPS-----PFEYADVVT 253 (359)
Q Consensus 197 ---k~v~l~-~~n--~g~~~~---l~~i~~la~~~~~~vivD~a~~~g---------~~~~~~~~~-----~~~~~D~v~ 253 (359)
++|+++ ++| +|...+ +++|.++|++||+++|+|++|+.| ....+.... .....|+++
T Consensus 173 ~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~ 252 (456)
T 2ez2_A 173 ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCT 252 (456)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEE
T ss_pred cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEE
Confidence 788887 766 675554 999999999999999999999876 222222100 001268888
Q ss_pred eCCCCcCCCCCceEEEEeC
Q 018231 254 TTTHKSLRGPRGAMIFFRK 272 (359)
Q Consensus 254 ~s~~K~l~gp~gG~l~~~~ 272 (359)
+|++|+++.+.||++++++
T Consensus 253 ~S~kk~~~~~~gG~~~~~~ 271 (456)
T 2ez2_A 253 MSGKKDCLVNIGGFLCMND 271 (456)
T ss_dssp EETTTTTCCSSCEEEEESC
T ss_pred EeCcccCCCCceeEEEECC
Confidence 8889976545578888854
No 184
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.72 E-value=1.8e-16 Score=153.72 Aligned_cols=235 Identities=13% Similarity=0.105 Sum_probs=138.4
Q ss_pred hhcccCCCcchhccccccccCh-HHHHHHHHHHHHhh-cCceeeCCCC-------CCcHHHHHHHHhhhh--ccCCCCCC
Q 018231 11 EKEKNGVTWPKQLNAPLEVVDP-EIADIIEHEKARQW-KGLELIPSEN-------FTSVSVMQAVGSVMT--NKYSEGYP 79 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~i~l~~~~~-------~~~~~v~~al~~~~~--~~~~~g~~ 79 (359)
|..|-+-++..++++. +..++ .++....+..+... ..|+|..+.. ++.+.+.+++.+... .....+|
T Consensus 13 ~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y- 90 (448)
T 3meb_A 13 EAQTQGPGSMSVFSGF-PASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEY- 90 (448)
T ss_dssp ---------CCTTTTC-CCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSC-
T ss_pred hhhhcCcchhhHHhcC-CCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCC-
Confidence 4445555555566444 44444 46666665544333 3588865442 345777777655441 1111122
Q ss_pred CCcccCCchhHHHHHHHHHHHHHHHc-CCC-----CCCCceeEEE--CCChH-HHHH--HHHhhcCCCCeeeecCCCCCc
Q 018231 80 GARYYGGNEYIDMAESLCQKRALEAF-RLD-----PEKWGVNVQS--LSGSP-SNFQ--VYTALLKPHDRIMALDLPHGG 148 (359)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~a~~~-g~~-----~~~~~~~v~~--tsG~~-a~~~--~~~al~~~Gd~Vl~~~~~~~~ 148 (359)
....+..+++ +.+++++ |.+ ++ +|++ |+|++ ++.. .+.+++.|||+|+++++.|.+
T Consensus 91 -----~~~~G~~~lr----~~ia~~l~g~~~~~~~~~----~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~ 157 (448)
T 3meb_A 91 -----PPVAGFPLFL----EAAQFLMFGKDSKAAQEG----RIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPN 157 (448)
T ss_dssp -----CCTTCCHHHH----HHHHHHHHCTTCHHHHTT----CEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTH
T ss_pred -----CCCcchHHHH----HHHHHHhcCCCccccCcC----cEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHh
Confidence 2223445555 4444444 775 34 3888 99999 7754 456778999999999977765
Q ss_pred ccCcccccccccee----eeeeeeEEEecccCCC-CCCCCHHHHHHHhhh--hCCcEEEEc-CCC-CCChh---hHHHHH
Q 018231 149 HLSHGYQTDTKKIS----AVSIFFETMPYRLNES-TGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIR 216 (359)
Q Consensus 149 ~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~-~~~~d~e~l~~~i~~--~~~k~v~l~-~~n-~g~~~---~l~~i~ 216 (359)
+.. .+. ..|.++..+++. +++ ++.+|++++++.+++ .++++++++ ++| ||... ++++|+
T Consensus 158 ~~~--------~~~~~~~~~G~~v~~~~~~-~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~ 228 (448)
T 3meb_A 158 HYG--------IYDKVFNKLKVPYKEYTYL-RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELL 228 (448)
T ss_dssp HHH--------HHHHHHCTTTSCCEEECCB-CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred HHH--------HHHhhHHhCCCeEEEEecc-ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHH
Confidence 532 333 456666556531 434 588999999999985 246677776 888 88554 466799
Q ss_pred HHHHHcCCEEEEecccccccccc-CCCCCC------CCCceEEEeCCCCcCCCCCc---eEE--EE
Q 018231 217 KVCNKQKAIMLADMAHISGLVAA-GVIPSP------FEYADVVTTTTHKSLRGPRG---AMI--FF 270 (359)
Q Consensus 217 ~la~~~~~~vivD~a~~~g~~~~-~~~~~~------~~~~D~v~~s~~K~l~gp~g---G~l--~~ 270 (359)
++|+++|+++|+|+++....... +....+ ...-.+++.|++|.|+ +.| |++ ++
T Consensus 229 ~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l~~v~ 293 (448)
T 3meb_A 229 PIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFG-LYGERIGCLHVVH 293 (448)
T ss_dssp HHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSC-CGGGCCEEEEEEC
T ss_pred HHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCC-Cccccceeeeeee
Confidence 99999999999999975322110 000000 0113478999999874 334 887 55
No 185
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.72 E-value=1.2e-16 Score=150.67 Aligned_cols=222 Identities=11% Similarity=0.098 Sum_probs=137.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHh---hc
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA---LL 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~a---l~ 133 (359)
+++.+.+++.+.+.+ + +.... .|+. ....+ +++++++++|++ + +|++|+|++ ++..++.+ +.
T Consensus 45 ~~~~v~~a~~~~~~~-~--~~~~~-~y~~-~~~~~----l~~~la~~~g~~-~----~v~~~~g~t~a~~~~~~~~~~~~ 110 (375)
T 2eh6_A 45 AYPKLTEALKEQVEK-L--LHVSN-LYEN-PWQEE----LAHKLVKHFWTE-G----KVFFANSGTESVEAAIKLARKYW 110 (375)
T ss_dssp SCHHHHHHHHHHHHH-C--SCCCT-TBCC-HHHHH----HHHHHHHTSSSC-E----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-c--cccCc-ccCC-HHHHH----HHHHHHhhcCCC-C----eEEEeCchHHHHHHHHHHHHHHh
Confidence 689999999998765 2 11111 2222 22333 558899999983 3 499999998 77766654 45
Q ss_pred ---CCC-CeeeecCCCCCcccCccccccccceeeeee-----eeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-C
Q 018231 134 ---KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSI-----FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 203 (359)
Q Consensus 134 ---~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~ 203 (359)
+|| |+|+++++.|++................+. .+..++ ..|+++|++.+++ ++++|+++ +
T Consensus 111 ~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~~~v~~~~~ 181 (375)
T 2eh6_A 111 RDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK--------LNDIDSVYKLLDE-ETAGIIIEVI 181 (375)
T ss_dssp HHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC--------TTCHHHHHTTCCT-TEEEEEECSE
T ss_pred ccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC--------CchHHHHHHHhcC-CeEEEEEeCc
Confidence 788 999999977665432111100000000000 011121 1489999999886 89999998 4
Q ss_pred CC-CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccC--CCCCCCCCceEEEeCCCCcCCCCCc-eEEEEeCCc
Q 018231 204 SA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (359)
Q Consensus 204 ~n-~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (359)
+| +|...+ +++|.++|++||+++|+|++|+ ++..... ....+ ...|++++| |+++++.+ |++++++
T Consensus 182 ~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~d~~s~S--K~~~~g~~~G~~~~~~-- 256 (375)
T 2eh6_A 182 QGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFN-LKPDVIALA--KGLGGGVPIGAILARE-- 256 (375)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC--GGGGTTSCCEEEEEEH--
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcC-CCCCEEEEc--ccccCCCCeEEEEEcH--
Confidence 45 687766 9999999999999999999998 4332211 11110 027888777 99876555 9999987
Q ss_pred chhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018231 275 KEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 320 (359)
Q Consensus 275 ~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~ 320 (359)
++.+.+........+++ +....+++.++|+.+.
T Consensus 257 ------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 289 (375)
T 2eh6_A 257 ------------EVAQSFTPGSHGSTFGG-NPLACRAGTVVVDEVE 289 (375)
T ss_dssp ------------HHHTTCCTTSCCCSSTT-CHHHHHHHHHHHHHHH
T ss_pred ------------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHH
Confidence 44444433211122344 4444555566777654
No 186
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.72 E-value=1.1e-17 Score=160.95 Aligned_cols=225 Identities=16% Similarity=0.054 Sum_probs=138.9
Q ss_pred cccccccChHHHHHHHHHHHHhhcCceeeCCCCC-----CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHH
Q 018231 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (359)
.+.+.....+++....+... +...|+|..++++ +++.+++++.+.+.... + .....|+...+..+++
T Consensus 11 ~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~--~-~~~~~Y~~~~G~~~lr---- 82 (422)
T 3d6k_A 11 AARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKD--G-VDCRNYGGLLGIADIR---- 82 (422)
T ss_dssp -------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTT--C-CBTTSSCCSSCCHHHH----
T ss_pred HHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhcc--c-hhhhCCCCCCCCHHHH----
Confidence 44556677788887766543 3457899888874 34456666654321000 0 0011234334445544
Q ss_pred HHHHHHcCCCCCCCceeEEECCChH-HH--HHHHHhhcCC------------CCeeeecCCCCCcccCccccccccceee
Q 018231 99 KRALEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLKP------------HDRIMALDLPHGGHLSHGYQTDTKKISA 163 (359)
Q Consensus 99 ~~~a~~~g~~~~~~~~~v~~tsG~~-a~--~~~~~al~~~------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (359)
+.+++++++++++ |++|+|++ ++ ..++.++.++ ||+|++.++.|.++ ...+..
T Consensus 83 ~~ia~~~~~~~~~----i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~--------~~~~~~ 150 (422)
T 3d6k_A 83 ELWAEALGLPADL----VVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRH--------FTITEH 150 (422)
T ss_dssp HHHHHHHTCCGGG----EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHH--------HHHHHH
T ss_pred HHHHHHhCCChhH----EEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHH--------HHHHHH
Confidence 6777778887754 99999999 65 4456677655 34799998555443 334455
Q ss_pred eeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEE-Ec-CCC-CCChhhHH---HHHHHHH-HcCCEEEEeccccccc
Q 018231 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV-AG-ASA-YARLYDYE---RIRKVCN-KQKAIMLADMAHISGL 236 (359)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~-l~-~~n-~g~~~~l~---~i~~la~-~~~~~vivD~a~~~g~ 236 (359)
.|.+++.++ .++ ++ +|+++|++.+++.++++|+ ++ ++| ||...+.+ +|.++|+ +||+++|+|++|+.+.
T Consensus 151 ~g~~~~~v~--~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 151 FGFEMINVP--MTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp HTCEEEEEE--EET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred cCCEEEecC--CCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 676666665 442 23 8999999999754688888 45 777 89776655 7777888 8999999999997422
Q ss_pred ccc-CCCCCC---------CCCceEEEeCCCCcC-CCCCceEEEEeC
Q 018231 237 VAA-GVIPSP---------FEYADVVTTTTHKSL-RGPRGAMIFFRK 272 (359)
Q Consensus 237 ~~~-~~~~~~---------~~~~D~v~~s~~K~l-~gp~gG~l~~~~ 272 (359)
+.. +....+ ..+.++++.|++|++ .|.+.|++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~ 273 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK 273 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH
Confidence 211 100111 113679999999973 233449999876
No 187
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.72 E-value=1.3e-16 Score=152.03 Aligned_cols=224 Identities=13% Similarity=0.074 Sum_probs=140.0
Q ss_pred ccChH-HHHHHHHHHHHh-hcCceeeCCCC-------CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHH
Q 018231 29 VVDPE-IADIIEHEKARQ-WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (359)
Q Consensus 29 ~~~~~-~~~~~~~~~~~~-~~~i~l~~~~~-------~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (359)
...++ ++.......... .+.|+|..+.. ++.+.+.+++.+........+|+ ...+..++++++.+
T Consensus 9 ~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~ 82 (401)
T 7aat_A 9 MGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYL------PIAGLADFTRASAE 82 (401)
T ss_dssp CCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCC------CTTCCHHHHHHHHH
T ss_pred CCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCC------CCCCCHHHHHHHHH
Confidence 33443 455554433322 24588876552 12357888887766531222232 22445667766667
Q ss_pred HHHHHcCC--CCCCCceeEEE--CCChH-HHHHHHHhh---cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEE
Q 018231 100 RALEAFRL--DPEKWGVNVQS--LSGSP-SNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (359)
Q Consensus 100 ~~a~~~g~--~~~~~~~~v~~--tsG~~-a~~~~~~al---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (359)
++.+.+|. ++++ |++ |+|++ ++..++.++ ++|||+|+++++.|.++.. .+...|.++..+
T Consensus 83 ~~~~~~~~~~~~~~----i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~~~ 150 (401)
T 7aat_A 83 LALGENSEAFKSGR----YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGLQLQAY 150 (401)
T ss_dssp HHHCTTCHHHHTTC----EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTCEEEEE
T ss_pred HhcCCCccccccCc----eEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCCeeEee
Confidence 76655554 3543 766 99999 777666555 4999999999976665532 344557666666
Q ss_pred ecccCCCCCCCCHHHHHHHhhh--hCCcEEEEc-CCC-CCC---hhhHHHHHHHHHHcCCEEEEecccccccccc---C-
Q 018231 172 PYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YAR---LYDYERIRKVCNKQKAIMLADMAHISGLVAA---G- 240 (359)
Q Consensus 172 ~~~~~~~~~~~d~e~l~~~i~~--~~~k~v~l~-~~n-~g~---~~~l~~i~~la~~~~~~vivD~a~~~g~~~~---~- 240 (359)
++... +++.+|++++++.+.+ .++++++++ ++| ||. ..++++|+++|++||+++|+|++|....... +
T Consensus 151 ~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 229 (401)
T 7aat_A 151 RYYDP-KTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDA 229 (401)
T ss_dssp ECEET-TTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHT
T ss_pred eeecc-ccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccH
Confidence 64322 4678999988877753 267888887 888 884 4568899999999999999999975332210 0
Q ss_pred --CCC-CCCCCceEEEeCCCCcCC--CCCceEEEEe
Q 018231 241 --VIP-SPFEYADVVTTTTHKSLR--GPRGAMIFFR 271 (359)
Q Consensus 241 --~~~-~~~~~~D~v~~s~~K~l~--gp~gG~l~~~ 271 (359)
+.. .......+++.|++|.++ |.+-|++++.
T Consensus 230 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~ 265 (401)
T 7aat_A 230 WALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVI 265 (401)
T ss_dssp HHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEE
T ss_pred HHHHHHHhcCCcEEEEecCCcccccccCceEEEEEE
Confidence 000 000125689999999874 2223888873
No 188
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.72 E-value=2.2e-17 Score=159.76 Aligned_cols=165 Identities=16% Similarity=0.080 Sum_probs=119.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhh-cCCCCeeeecCCCCCcccCccccccccceeeee
Q 018231 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (359)
Q Consensus 88 ~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (359)
.+..++.+.+++++++++|++++ ++++++|++ ++.+++.++ +++||+|+++.+.|+++..++.. .+...|
T Consensus 104 ~g~~~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~----~a~~~G 175 (438)
T 1wyu_A 104 QGVLQATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRA----YLEAVG 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHH----HHHHTT
T ss_pred hhHHHHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHH----HHHHCC
Confidence 34455666688999999999764 488899888 545454443 68999999999888766443321 112346
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEecc-ccccccccCCC
Q 018231 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMA-HISGLVAAGVI 242 (359)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a-~~~g~~~~~~~ 242 (359)
.+++.++. +++.+|+++ +++ +|++|+++ + | +|.+.|+++|.++|+++|+++++|.. ++.|..... .
T Consensus 176 ~~v~~v~~----~~~~~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~ 244 (438)
T 1wyu_A 176 AKLLTLPL----EGGRTPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-G 244 (438)
T ss_dssp CEEEEECC----BTTBCCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-H
T ss_pred CEEEEEcC----cCCccCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-c
Confidence 66666653 235777766 566 89999988 6 7 89999999999999999999997755 556654321 1
Q ss_pred CCCCCCceEEEeCCCC-----cCCCCCceEEEEeCCc
Q 018231 243 PSPFEYADVVTTTTHK-----SLRGPRGAMIFFRKGV 274 (359)
Q Consensus 243 ~~~~~~~D~v~~s~~K-----~l~gp~gG~l~~~~~~ 274 (359)
.. ++|++++|+|| |++||..|++++++++
T Consensus 245 ~~---g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~ 278 (438)
T 1wyu_A 245 AY---GADIAVGDGQSLGLPMGFGGPHFGFLATKKAF 278 (438)
T ss_dssp HH---TCSEEEEECTTTTCCCGGGCSCCEEEEECGGG
T ss_pred cC---CCCEEEECCcccCCCccCCCCCeeEEEEcHHH
Confidence 12 48999999887 6788855999998864
No 189
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.71 E-value=6.1e-17 Score=153.93 Aligned_cols=201 Identities=13% Similarity=0.102 Sum_probs=129.1
Q ss_pred cCceeeCCCC-------CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEE-
Q 018231 47 KGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS- 118 (359)
Q Consensus 47 ~~i~l~~~~~-------~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~- 118 (359)
+.|+|..+.. ++++.+.+++.+.+......+| +...+..++++++.+++... +.+++ +|++
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~la~~~~~~-~~~~~----~v~~~ 95 (394)
T 2ay1_A 27 GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTY------AGLSGEPEFQKAMGELILGD-GLKSE----TTATL 95 (394)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCC------CCSSCCHHHHHHHHHHHHGG-GCCGG----GEEEE
T ss_pred cccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCC------CCCCCcHHHHHHHHHHHhCC-CCCcc----cEEEE
Confidence 5688887762 4579999999887653111122 22233455554444443211 22444 4888
Q ss_pred -CCChH-HHHHHHHhhc--CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh
Q 018231 119 -LSGSP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (359)
Q Consensus 119 -tsG~~-a~~~~~~al~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (359)
|+|++ ++..++.++. .+||+|+++.+.|.++ ...+...|.++..+++... +++.+|++++++.+++.
T Consensus 96 ~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~--------~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~ 166 (394)
T 2ay1_A 96 ATVGGTGALRQALELARMANPDLRVFVSDPTWPNH--------VSIMNFMGLPVQTYRYFDA-ETRGVDFEGMKADLAAA 166 (394)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHH--------HHHHHHHTCCEEEEECEET-TTTEECHHHHHHHHHTC
T ss_pred ecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhH--------HHHHHHcCCceEEEecccc-cCCccCHHHHHHHHHhC
Confidence 98888 8887776664 4999999998666543 2234445666666654322 45788999999999752
Q ss_pred --CCcEEEEc-CCC-CCChh---hHHHHHHHHHHcCCEEEEeccccccccc-------cC-CCCCCCCCceEEEeCCCCc
Q 018231 195 --RPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVA-------AG-VIPSPFEYADVVTTTTHKS 259 (359)
Q Consensus 195 --~~k~v~l~-~~n-~g~~~---~l~~i~~la~~~~~~vivD~a~~~g~~~-------~~-~~~~~~~~~D~v~~s~~K~ 259 (359)
++++++++ ++| +|... ++++|.++|+++|+++|+|++|+..... .. +...+ ..++++.|++|+
T Consensus 167 ~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~ 244 (394)
T 2ay1_A 167 KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRI--PEVLIAASCSKN 244 (394)
T ss_dssp CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHC--SSEEEEEECTTT
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcC--CCEEEEEeccCC
Confidence 25666666 777 88655 4678899999999999999999753321 11 11111 134778899998
Q ss_pred CCCCCc---eEEEE
Q 018231 260 LRGPRG---AMIFF 270 (359)
Q Consensus 260 l~gp~g---G~l~~ 270 (359)
++ +.| |++++
T Consensus 245 ~~-~~G~riG~~~~ 257 (394)
T 2ay1_A 245 FG-IYRERTGCLLA 257 (394)
T ss_dssp TT-CGGGCEEEEEE
T ss_pred Cc-CcCCccceEEE
Confidence 84 334 99887
No 190
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.71 E-value=2.7e-17 Score=158.37 Aligned_cols=170 Identities=14% Similarity=-0.008 Sum_probs=117.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HH--HHHHHhhcC--C----------CCeeeecCCCCC
Q 018231 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLK--P----------HDRIMALDLPHG 147 (359)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~--~~~~~al~~--~----------Gd~Vl~~~~~~~ 147 (359)
.|+...+..+++ +.+++++++++++ |++|+|++ ++ ..++.++++ | ||+|++.++.|.
T Consensus 73 ~Y~~~~g~~~lr----~~ia~~~~~~~~~----i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~ 144 (427)
T 3ppl_A 73 NYGGLDGIVDIR----QIWADLLGVPVEQ----VLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYD 144 (427)
T ss_dssp SSCCSSCCHHHH----HHHHHHHTSCGGG----EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCH
T ss_pred CCCCCCCcHHHH----HHHHHHhCCCcce----EEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcH
Confidence 344445555554 6777778888754 99999999 76 357788776 6 999999995555
Q ss_pred cccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc--CCC-CCChhhHH---HHHHHH-H
Q 018231 148 GHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA-YARLYDYE---RIRKVC-N 220 (359)
Q Consensus 148 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~--~~n-~g~~~~l~---~i~~la-~ 220 (359)
++ ...+...|.+++.++ ++ +++ +|+++|++.++..++++|+++ ++| ||...+.+ +|.++| +
T Consensus 145 ~~--------~~~~~~~g~~~~~v~--~~-~~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~ 212 (427)
T 3ppl_A 145 RH--------FSITERFGFEMISVP--MN-EDG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETA 212 (427)
T ss_dssp HH--------HHHHHHTTCEEEEEE--EE-TTE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCS
T ss_pred HH--------HHHHHHcCCEEEEeC--CC-CCC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhh
Confidence 43 334455676665565 44 223 899999999953378988875 477 88776655 888888 9
Q ss_pred HcCCEEEEeccccccccccCC-CCC---------CCCCceEEEeCCCCcCC-CCCceEEEEeC
Q 018231 221 KQKAIMLADMAHISGLVAAGV-IPS---------PFEYADVVTTTTHKSLR-GPRGAMIFFRK 272 (359)
Q Consensus 221 ~~~~~vivD~a~~~g~~~~~~-~~~---------~~~~~D~v~~s~~K~l~-gp~gG~l~~~~ 272 (359)
+||+++|+|++|+...+.... ... ...+.++++.|++|++. |.+.|+++.++
T Consensus 213 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~ 275 (427)
T 3ppl_A 213 APDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA 275 (427)
T ss_dssp STTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH
T ss_pred cCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH
Confidence 999999999998653332111 000 01136799999999743 33339988876
No 191
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.70 E-value=1.1e-16 Score=158.63 Aligned_cols=205 Identities=13% Similarity=0.127 Sum_probs=137.0
Q ss_pred CceeeCCCC-CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHH-cC-CCCC-CCceeEEECCChH
Q 018231 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA-FR-LDPE-KWGVNVQSLSGSP 123 (359)
Q Consensus 48 ~i~l~~~~~-~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~-~g-~~~~-~~~~~v~~tsG~~ 123 (359)
.|+|..+.. ..++.+++++.+.+... +|+ ....+..++++.+.+++.+. .+ +... . .+|++|+|++
T Consensus 105 ~i~l~~g~~~~~~~~~v~a~~~~~~~~---~y~-----~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~--~~i~~t~G~t 174 (533)
T 3f6t_A 105 AVNYCHTELGLNRDKVVAEWVNGAVAN---NYP-----VPDRCLVNTEKIINYFLQELSYKDANLAEQ--TDLFPTEGGT 174 (533)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHTC---SCC-----SSSSCCHHHHHHHHHHHHHHHTTTCCCGGG--EEEEEEEHHH
T ss_pred heeccCCCCCcCCcHHHHHHHHHHHhC---CCC-----CCcccHHHHHHHHHHHHHHhcCCCCCCCCc--ceEEEECCHH
Confidence 355654333 24677777766665431 221 12234567777777888666 23 3221 0 2599999999
Q ss_pred -HHHHHHHh-----hcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC-CCCCCCCHHHHHHHhhhhCC
Q 018231 124 -SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRP 196 (359)
Q Consensus 124 -a~~~~~~a-----l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~e~l~~~i~~~~~ 196 (359)
++..++.+ ++++||+|++++++|.++.. .+...|..++.+++..+ .+++.+|+++|++.+++ ++
T Consensus 175 ~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~ 245 (533)
T 3f6t_A 175 AAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SI 245 (533)
T ss_dssp HHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TE
T ss_pred HHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CC
Confidence 88778877 78999999999977765533 34455666766765431 24678999999999987 89
Q ss_pred cEEEEc-CCC-CCChhh---HHHHHHHHH-HcCCEEEEeccccccccccCCCC-CC-CCCceEEEeCCCCcCC--CCCce
Q 018231 197 KLIVAG-ASA-YARLYD---YERIRKVCN-KQKAIMLADMAHISGLVAAGVIP-SP-FEYADVVTTTTHKSLR--GPRGA 266 (359)
Q Consensus 197 k~v~l~-~~n-~g~~~~---l~~i~~la~-~~~~~vivD~a~~~g~~~~~~~~-~~-~~~~D~v~~s~~K~l~--gp~gG 266 (359)
++|+++ |+| +|...+ +++|+++|+ +||+++|+|++|+.... +... .. ..+.++++.|++|.++ |.+.|
T Consensus 246 k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 323 (533)
T 3f6t_A 246 KALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVP--NFKSIYSVVPYNTMLVYSYSKLFGCTGWRLG 323 (533)
T ss_dssp EEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGST--TCCCHHHHSGGGEEEEEESHHHHTCGGGCEE
T ss_pred eEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcccccc--CccCHhhcCCCCEEEEecCcccCCCcccceE
Confidence 999886 888 886655 458888888 68999999999863221 1100 00 0135699999999874 33339
Q ss_pred EEEEeCC
Q 018231 267 MIFFRKG 273 (359)
Q Consensus 267 ~l~~~~~ 273 (359)
+++++++
T Consensus 324 ~l~~~~~ 330 (533)
T 3f6t_A 324 VIALNEK 330 (533)
T ss_dssp EEEEESS
T ss_pred EEEECcH
Confidence 9999885
No 192
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.70 E-value=4.3e-17 Score=156.97 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=116.0
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.++|+++..++... ....|.++..++ +.+
T Consensus 63 l~~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~~~~~-~~~ 132 (421)
T 2ctz_A 63 LEKRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVT----LKRLGIEVRFTS-REE 132 (421)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTH----HHHTTCEEEECC-TTC
T ss_pred HHHHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCCEEEEEC-CCC
Confidence 5588999999863 488888866888788888999999999998888765543211 123354443330 232
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccc-cccccccCCCCCCCCCceEEE
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAH-ISGLVAAGVIPSPFEYADVVT 253 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~-~~g~~~~~~~~~~~~~~D~v~ 253 (359)
|++++++.+++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++| +.|..... ... ++|+++
T Consensus 133 ------d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~-~~~---~~Di~~ 201 (421)
T 2ctz_A 133 ------RPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRP-LAW---GAALVT 201 (421)
T ss_dssp ------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCG-GGG---TCSEEE
T ss_pred ------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCc-ccc---CCeEEE
Confidence 89999999987 89999987 777 899999999999999999999999999 77742111 112 489999
Q ss_pred eCCCCcCCCCCc--eEEEEe
Q 018231 254 TTTHKSLRGPRG--AMIFFR 271 (359)
Q Consensus 254 ~s~~K~l~gp~g--G~l~~~ 271 (359)
+|+||++++|.+ |++++.
T Consensus 202 ~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 202 HSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp EETTTTTTCSSCCCCEEEEE
T ss_pred ECCcccccCCCCcEEEEEEe
Confidence 999999987653 555553
No 193
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.70 E-value=9.6e-17 Score=153.55 Aligned_cols=230 Identities=13% Similarity=0.050 Sum_probs=130.9
Q ss_pred chhccccccccChH-HHHHHHHHHHHh-hcCceeeCCCC---CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHH
Q 018231 20 PKQLNAPLEVVDPE-IADIIEHEKARQ-WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (359)
Q Consensus 20 ~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~i~l~~~~~---~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~ 94 (359)
.-.+.++++.++++ ++..+.+..+.. .+.|+|..+.. ..++.+.+++.+.... ...+ |....+..+++
T Consensus 13 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~-~~~~------y~~~~g~~~lr 85 (409)
T 4eu1_A 13 EAQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLG-TNMD------YAPVTGIASFV 85 (409)
T ss_dssp --------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCC-SCCC------CCCTTCCHHHH
T ss_pred hhhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCcc-cccc------CCCCCCcHHHH
Confidence 33445666777777 667666654332 36688887653 3456677777766222 1112 22234445666
Q ss_pred HHHHHHHHHHcCCC-----CCCCceeE--EECCChH-HHHH---HHHhhcCCCCeeeecCCCCCcccCccccccccceee
Q 018231 95 SLCQKRALEAFRLD-----PEKWGVNV--QSLSGSP-SNFQ---VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (359)
Q Consensus 95 ~~~~~~~a~~~g~~-----~~~~~~~v--~~tsG~~-a~~~---~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (359)
+++.+++ +|.+ +++ | ..++|++ ++.. ++.+++++||+|+++++.|.++. ..+..
T Consensus 86 ~~ia~~~---~~~~~~~~~~~~----i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~--------~~~~~ 150 (409)
T 4eu1_A 86 EEAQKLC---FGPTCAALRDGR----IASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHE--------SIFAK 150 (409)
T ss_dssp HHHHHHH---HCSSCHHHHTTC----EEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHH--------HHHHH
T ss_pred HHHHHHH---cCCCchhhccCc----eeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHH--------HHHHH
Confidence 4444444 2554 333 5 3477766 5543 34556789999999996665442 24455
Q ss_pred eeeeeEEEecccCCCCCCCCHHHHHHHhhh--hCCcEEEEc-CCC-CCChhh---HHHHHHHHHHcCCEEEEeccccccc
Q 018231 164 VSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGL 236 (359)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~~k~v~l~-~~n-~g~~~~---l~~i~~la~~~~~~vivD~a~~~g~ 236 (359)
.|.++..+++..+ +++.+|++++++.+++ .++++++++ |+| ||...+ +++|+++|++||+++|+|++|+...
T Consensus 151 ~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~ 229 (409)
T 4eu1_A 151 AGMELTPYSYYDP-ATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFA 229 (409)
T ss_dssp TTCEEEEECCEET-TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTT
T ss_pred cCCeEEEEEeecC-cCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccc
Confidence 6766666654222 5678999999999974 145566656 888 886655 6669999999999999999976432
Q ss_pred ccc------CCCCC-CCCCceEEEeCCCCcCCCC--CceEE--EEeC
Q 018231 237 VAA------GVIPS-PFEYADVVTTTTHKSLRGP--RGAMI--FFRK 272 (359)
Q Consensus 237 ~~~------~~~~~-~~~~~D~v~~s~~K~l~gp--~gG~l--~~~~ 272 (359)
... ..... ....-.+++.|++|.++.+ +-|++ ++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~ 276 (409)
T 4eu1_A 230 TGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTAS 276 (409)
T ss_dssp TSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSS
T ss_pred cCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCC
Confidence 211 00000 0011347889999987433 23887 5555
No 194
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.70 E-value=8.2e-18 Score=159.57 Aligned_cols=167 Identities=13% Similarity=0.075 Sum_probs=119.5
Q ss_pred HHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCC----CCeeeecCCCCCcccCccccccccceeeeeeeeE
Q 018231 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP----HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 169 (359)
Q Consensus 95 ~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~----Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 169 (359)
..+.+|++.+ |.+... ..++++|+| ++++++.+.+++ ||+|+++...|.+++. ++.+.|.+.+
T Consensus 120 ~l~ld~L~~~-G~~~~~---~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~k--------AliL~Gl~Pv 187 (501)
T 3hl2_A 120 SLVLDIIKLA-GVHTVA---NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMITAGFEPV 187 (501)
T ss_dssp HHHHHHHHHT-TCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHHHTTCEEE
T ss_pred HHHHHHHHHc-CCCCCC---cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHH--------HHHHcCCeEE
Confidence 3366777776 987643 588889999 666666666663 4999999877777654 5567788887
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhhCCc--EEEEc-CCCCC--ChhhHHHHHHHHHHcCCEEEEeccccccccccC-CCC
Q 018231 170 TMPYRLNESTGYIDYDQLEKSATLFRPK--LIVAG-ASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP 243 (359)
Q Consensus 170 ~v~~~~~~~~~~~d~e~l~~~i~~~~~k--~v~l~-~~n~g--~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~-~~~ 243 (359)
.++...+.+...+|+++++++|+++.++ ++++. +++++ ...|+++|+++|++||+++++|+||++-..... +..
T Consensus 188 ~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~ 267 (501)
T 3hl2_A 188 VIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQ 267 (501)
T ss_dssp EECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHH
T ss_pred EEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHH
Confidence 7765555455689999999999875322 33333 55554 568999999999999999999999965442221 111
Q ss_pred CCCC-C-ceEEEeCCCCcCCCCCce-EEEEeCC
Q 018231 244 SPFE-Y-ADVVTTTTHKSLRGPRGA-MIFFRKG 273 (359)
Q Consensus 244 ~~~~-~-~D~v~~s~~K~l~gp~gG-~l~~~~~ 273 (359)
..+. | +|+++.|+||++..|.|| +++++++
T Consensus 268 sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~ 300 (501)
T 3hl2_A 268 QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 (501)
T ss_dssp HHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred HHHhcCCCcEEEecccccceeecCceEEEeCCH
Confidence 1111 4 999999999999999885 4456664
No 195
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.69 E-value=6e-16 Score=148.69 Aligned_cols=239 Identities=12% Similarity=0.014 Sum_probs=142.7
Q ss_pred CceeeCCC--CC---C-cHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeEEECC
Q 018231 48 GLELIPSE--NF---T-SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLS 120 (359)
Q Consensus 48 ~i~l~~~~--~~---~-~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~-~~~~~~~v~~ts 120 (359)
.+++.++. ++ . +|.|++++.+.+.... .+.. ..|.. .....+++.+++++|++ ++ +|++|+
T Consensus 44 ~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~-~~~~~-----~~~~~l~~~la~~~~~~~~~----~v~~~~ 111 (419)
T 2eo5_A 44 YLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAA-NDFYN-----IPQLELAKKLVTYSPGNFQK----KVFFSN 111 (419)
T ss_dssp EEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSC-SCSCC-----HHHHHHHHHHHHHSSCSSCE----EEEEES
T ss_pred EEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccc-cccCC-----HHHHHHHHHHHHhCCCCcCC----EEEEeC
Confidence 46776554 33 2 7999999999886521 1111 11221 12223568899999986 43 599999
Q ss_pred ChH-HHHHHHHhhcC-CCCeeeecCCCCCcccCcccc------ccccceeeeeeeeEEEecccCCCCCC-----------
Q 018231 121 GSP-SNFQVYTALLK-PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNESTGY----------- 181 (359)
Q Consensus 121 G~~-a~~~~~~al~~-~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~~~----------- 181 (359)
|++ ++..++.++.. +||+|+++++.|++....... .++.........+..+++ + +.+.
T Consensus 112 gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~-~~~~~~~g~~~~~~~ 188 (419)
T 2eo5_A 112 SGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPY--P-NPYRNPWHINGYENP 188 (419)
T ss_dssp SHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECC--C-CSSSCTTCCCTTTCH
T ss_pred chHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECC--C-ccccccccccccccc
Confidence 999 88877776543 499999999777643221110 111111111122444543 2 2222
Q ss_pred -----CCHHHHH-HHhhh----hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccC--CC
Q 018231 182 -----IDYDQLE-KSATL----FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VI 242 (359)
Q Consensus 182 -----~d~e~l~-~~i~~----~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~--~~ 242 (359)
+|+++|+ +.+++ .++++|+++|+| +|...+ +++|.++|++||+++|+|++|+ +|..... ..
T Consensus 189 ~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~ 268 (419)
T 2eo5_A 189 SELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIE 268 (419)
T ss_dssp HHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGG
T ss_pred hhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHH
Confidence 4688999 88874 256777777654 576555 9999999999999999999997 4322110 01
Q ss_pred CCCCCCceEEEeCCCCcCCCC-Cc-eEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHh
Q 018231 243 PSPFEYADVVTTTTHKSLRGP-RG-AMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 320 (359)
Q Consensus 243 ~~~~~~~D~v~~s~~K~l~gp-~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~ 320 (359)
... ...|++++| |+|+++ -. |+++++++ +. .+ .... ....+.|.++.+|..+||+.+.
T Consensus 269 ~~~-~~~d~~t~s--K~~~~G~~riG~~~~~~~--------------~~-~~-~~~~-~~t~~~n~~~~~aa~aal~~~~ 328 (419)
T 2eo5_A 269 NFN-TVPDVITLA--KALGGGIMPIGATIFRKD--------------LD-FK-PGMH-SNTFGGNALACAIGSKVIDIVK 328 (419)
T ss_dssp GGT-CCCSEEEEC--GGGGTTTSCCEEEEEEGG--------------GC-CC--------CCCCCHHHHHHHHHHHHHHH
T ss_pred hcC-CCCCEEEec--ccccCCccceEEEEEchH--------------hh-cC-Cccc-CCCCCCCHHHHHHHHHHHHHHH
Confidence 001 025777655 988753 33 99999873 22 22 1001 1123447788888888898765
Q ss_pred c
Q 018231 321 T 321 (359)
Q Consensus 321 ~ 321 (359)
+
T Consensus 329 ~ 329 (419)
T 2eo5_A 329 D 329 (419)
T ss_dssp H
T ss_pred H
Confidence 3
No 196
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.69 E-value=4.2e-16 Score=148.34 Aligned_cols=234 Identities=13% Similarity=0.100 Sum_probs=141.9
Q ss_pred cCceeeCC--CCC---CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~--~~~---~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..+++.++ .++ .+|.+++++.+.+.+.. .++ . .+. ....+.+++++++++|.+ .|++++|
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~-~~~-----~~~~~~l~~~la~~~~~~------~v~~~~g 101 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL-HTS--N-LYY-----NENIAAAAKNLAKASALE------RVFFTNS 101 (395)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS-CCC--T-TSB-----CHHHHHHHHHHHHHHTCS------EEEEESS
T ss_pred EEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc-ccc--c-ccC-----CHHHHHHHHHHHHhcCCC------eEEEeCC
Confidence 34666654 333 47999999999876521 111 1 111 122233568888888832 4889998
Q ss_pred hH-HHHHHHHhhc-------CCCCeeeecCCCCCcccCcccc-----ccccceeeeeeeeEEEecccCCCCCCCCHHHHH
Q 018231 122 SP-SNFQVYTALL-------KPHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (359)
Q Consensus 122 ~~-a~~~~~~al~-------~~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~ 188 (359)
++ ++..++.++. .+||+|+++++.|++....... .+.......+..+..++ .+ |+++|+
T Consensus 102 g~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------d~~~l~ 173 (395)
T 3nx3_A 102 GTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAK--YN------DISSVE 173 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEEC--TT------CHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeC--CC------CHHHHH
Confidence 88 8887777664 5689999999877654311100 00000001111222222 22 899999
Q ss_pred HHhhhhCCcEEEEcC-CC-CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccC--CCCCCCCCceEEEeCCCCc
Q 018231 189 KSATLFRPKLIVAGA-SA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKS 259 (359)
Q Consensus 189 ~~i~~~~~k~v~l~~-~n-~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~ 259 (359)
+.+++ ++++|++.+ +| +|...+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++| |+
T Consensus 174 ~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~-~~~d~~t~s--K~ 249 (395)
T 3nx3_A 174 KLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQ-ILPDIMTSA--KA 249 (395)
T ss_dssp TTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC--GG
T ss_pred HhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcC-CCCCEEEec--cc
Confidence 99986 788888763 33 665555 9999999999999999999986 3322110 01111 025788776 98
Q ss_pred CCCC-CceEEEEeCCcchhccCCcchhhhH-HHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 260 LRGP-RGAMIFFRKGVKEINKQGKEVFYDY-EEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 260 l~gp-~gG~l~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++++ +.|++++++ ++ .+.+.... .+...+.+.++.++..++++.+..+
T Consensus 250 ~~~G~~~G~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~~aa~aal~~~~~~ 299 (395)
T 3nx3_A 250 LGCGLSVGAFVINQ--------------KVASNSLEAGD-HGSTYGGNPLVCAGVNAVFEIFKEE 299 (395)
T ss_dssp GTTTSCCEEEEECH--------------HHHHHHSCTTC-CSSCBSCCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCceEEEEEch--------------hhhhhhcCCcc-cCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 8643 349998887 55 55543321 1122345677777888888877544
No 197
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.69 E-value=5.8e-17 Score=157.74 Aligned_cols=189 Identities=14% Similarity=0.136 Sum_probs=118.2
Q ss_pred HHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcCC---
Q 018231 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP--- 135 (359)
Q Consensus 60 ~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~~--- 135 (359)
+.+++++.+.+.... ..|+......++ ++++++++|.+ .+++|+|++ ++..++.+++++
T Consensus 53 ~~v~~a~~~~l~~~~-------~~y~~~~~~~~l----~~~la~~~~~~------~v~~t~~gt~A~~~al~~~~~~~~~ 115 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-------EAYSGSRSYYAL----AESVKNIFGYQ------YTIPTHQGRGAEQIYIPVLIKKREQ 115 (467)
T ss_dssp SCCCHHHHHHTTSCC-------CCSSSCHHHHHH----HHHHHHHHCCS------EEEEEC--CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCc-------ceeccCchhHHH----HHHHHHHhCcC------cEEEcCCcHHHHHHHHHHHhccccc
Confidence 778888877764311 123333444444 47888888874 388888777 888788888888
Q ss_pred --C----CeeeecCCCCCcccCccccccccceeeeeeeeEEE----ecccC---CCCCCCCHHHHHHHhhh---hCCcEE
Q 018231 136 --H----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM----PYRLN---ESTGYIDYDQLEKSATL---FRPKLI 199 (359)
Q Consensus 136 --G----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v----~~~~~---~~~~~~d~e~l~~~i~~---~~~k~v 199 (359)
| |+|++. ..|...+.... ...+...... +++.+ +.++.+|+++|++++++ .++++|
T Consensus 116 ~~G~~~~d~Ii~~-~~h~~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~v 187 (467)
T 2oqx_A 116 EKGLDRSKMVAFS-NYFFDTTQGHS-------QINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_dssp HHCCCTTTCEEEE-SSCCHHHHHHH-------HHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCE
T ss_pred cCCCCccceEEec-ccccccchhhh-------hccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEE
Confidence 8 997765 34422110000 0011111111 11111 12457899999999984 268999
Q ss_pred EEc-CCC-C-CC---hhhHHHHHHHHHHcCCEEEEeccccc-ccc--------ccCCCCCCC-----CCceEEEeCCCCc
Q 018231 200 VAG-ASA-Y-AR---LYDYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKS 259 (359)
Q Consensus 200 ~l~-~~n-~-g~---~~~l~~i~~la~~~~~~vivD~a~~~-g~~--------~~~~~~~~~-----~~~D~v~~s~~K~ 259 (359)
+++ ++| + |. ..++++|+++|++||+++|+|++|+. +.. ..+.....+ ..+|++++|+||+
T Consensus 188 i~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~ 267 (467)
T 2oqx_A 188 VATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKD 267 (467)
T ss_dssp EEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSST
T ss_pred EEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccc
Confidence 887 666 5 54 35688999999999999999999877 432 111110000 2378899999999
Q ss_pred CCCCCceEEEEeCC
Q 018231 260 LRGPRGAMIFFRKG 273 (359)
Q Consensus 260 l~gp~gG~l~~~~~ 273 (359)
++.|.||+++++++
T Consensus 268 ~g~~~Gg~~~~~~~ 281 (467)
T 2oqx_A 268 AMVPMGGLLCMKDD 281 (467)
T ss_dssp TCCSSCEEEEECSG
T ss_pred cCCCCceEEEecCh
Confidence 97776788888764
No 198
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.69 E-value=7.9e-16 Score=147.75 Aligned_cols=236 Identities=13% Similarity=0.016 Sum_probs=140.2
Q ss_pred CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHH---hh
Q 018231 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYT---AL 132 (359)
Q Consensus 57 ~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~---al 132 (359)
++++.+++++.+.+.. + +.....++ ......+ +++.++++++.+.++ +|++|+|++ ++..++. ++
T Consensus 57 ~~~~~v~~a~~~~~~~-~--~~~~~~~~-~~~~~~~----l~~~la~~~~~~~~~---~v~~~~g~~~a~~~~~~~a~~~ 125 (426)
T 1sff_A 57 HLHPKVVAAVEAQLKK-L--SHTCFQVL-AYEPYLE----LCEIMNQKVPGDFAK---KTLLVTTGSEAVENAVKIARAA 125 (426)
T ss_dssp BTCHHHHHHHHHHTTT-C--SCCCTTTE-ECHHHHH----HHHHHHHHSSCSSCE---EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-C--CCcccccc-CCHHHHH----HHHHHHHhCCccccc---EEEEeCchHHHHHHHHHHHHHh
Confidence 3689999999998765 2 11111112 2233343 557888888322212 599999999 8887776 66
Q ss_pred cCCCCeeeecCCCCCcccCccccc------cccceeeeeeeeEEEecccCC--CCCCCCHHHHHHHhhh----hCCcEEE
Q 018231 133 LKPHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNE--STGYIDYDQLEKSATL----FRPKLIV 200 (359)
Q Consensus 133 ~~~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~--~~~~~d~e~l~~~i~~----~~~k~v~ 200 (359)
.++| +|++.++.|++........ ++.........+..++++.+. .++.+|+++|++.+++ .++++|+
T Consensus 126 ~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~ 204 (426)
T 1sff_A 126 TKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIV 204 (426)
T ss_dssp HTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred hCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEE
Confidence 7777 8888887776543211100 000000000013345543210 1234789999999873 3678888
Q ss_pred Ec--CCCCCChhh----HHHHHHHHHHcCCEEEEeccccccccccCC-CCC-CCC-CceEEEeCCCCcCCC-CCceEEEE
Q 018231 201 AG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKSLRG-PRGAMIFF 270 (359)
Q Consensus 201 l~--~~n~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~v~~s~~K~l~g-p~gG~l~~ 270 (359)
++ ++|+|...+ +++|.++|++||+++|+|++|+ |....+. ... ... .+|++++ +|+|++ .+-|++++
T Consensus 205 ~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~s~--sK~~~~GlriG~~~~ 281 (426)
T 1sff_A 205 IEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLTTF--AKSIAGGFPLAGVTG 281 (426)
T ss_dssp ECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEEEE--CGGGGTSSCCEEEEE
T ss_pred EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEEEE--cccccCCCceEEEEE
Confidence 85 456885655 9999999999999999999997 4322111 000 011 2677755 498864 12299999
Q ss_pred eCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 271 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++ ++.+.+..... ....+.+....+++.+||+.+.++
T Consensus 282 ~~--------------~~~~~l~~~~~-~~~~~~~~~~~~a~~aal~~~~~~ 318 (426)
T 1sff_A 282 RA--------------EVMDAVAPGGL-GGTYAGNPIACVAALEVLKVFEQE 318 (426)
T ss_dssp EH--------------HHHTTSCTTSB-CCSSSSCHHHHHHHHHHHHHHHHT
T ss_pred cH--------------HHHhhhccCCc-CcCCCCCHHHHHHHHHHHHHHHhc
Confidence 87 44444432111 112345677788888899887654
No 199
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.69 E-value=8.3e-16 Score=148.50 Aligned_cols=224 Identities=15% Similarity=0.161 Sum_probs=130.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc---
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--- 133 (359)
.+|.+.+++.+.+.... ... ..+. .+... .+++++++++|.+ .|++++|++ ++..++.++.
T Consensus 82 ~~p~v~~ai~~~~~~~~---~~~-~~~~-~~~~~----~l~~~la~~~g~~------~v~~~~sGseA~~~al~~a~~~~ 146 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLT---ICS-RAFF-SVPLG----ICERYLTNLLGYD------KVLMMNTGAEANETAYKLCRKWG 146 (433)
T ss_dssp TCHHHHHHHHHHHTTCS---CCC-TTSE-EHHHH----HHHHHHHHHHTCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC---Ccc-CCcC-CHHHH----HHHHHHHhhcCCC------eEEEeCCHHHHHHHHHHHHHHHh
Confidence 67999999999876521 111 1111 12223 3557888888743 488888888 8887777643
Q ss_pred ------CCC-CeeeecCCCCCcccCccccccccceeeee-----eeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 018231 134 ------KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVS-----IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (359)
Q Consensus 134 ------~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l 201 (359)
.+| |+|+++++.|.+................+ ..+..++ . .|+++|++.++..++++|++
T Consensus 147 ~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~--~------~d~~~le~~l~~~~~~~vi~ 218 (433)
T 1z7d_A 147 YEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVP--Y------DDLEALEEELKDPNVCAFIV 218 (433)
T ss_dssp HHTSCCCTTCCEEEEETTC--------------------------CEEEEC--T------TCHHHHHHHHTSTTEEEEEE
T ss_pred hhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeC--C------CCHHHHHHHhCCCCEEEEEE
Confidence 478 99999987765542211100000000000 1122222 2 28999999994227888888
Q ss_pred cCCC--CCChh----hHHHHHHHHHHcCCEEEEeccccccccccCC-CC-CCCC-CceEEEeCCCCcCCCC--CceEEEE
Q 018231 202 GASA--YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRGP--RGAMIFF 270 (359)
Q Consensus 202 ~~~n--~g~~~----~l~~i~~la~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~s~~K~l~gp--~gG~l~~ 270 (359)
.|.+ +|.+. ++++|.++|++||+++|+|++|+ |....+. .. ..+. ..|++++| |+++++ +.|++++
T Consensus 219 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t~s--K~l~~G~~~~G~v~~ 295 (433)
T 1z7d_A 219 EPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVILLG--KALSGGHYPISAVLA 295 (433)
T ss_dssp CSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSCCEEEEE
T ss_pred ECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEEEEC--ccccCCCCCeEEEEE
Confidence 7543 57544 79999999999999999999996 4321111 00 0001 36888655 998754 5699999
Q ss_pred eCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 271 RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++ ++.+.+....... ..+.|..+.++..++|+.+.++
T Consensus 296 ~~--------------~~~~~l~~~~~~~-t~~~~~~~~aaa~aal~~~~~~ 332 (433)
T 1z7d_A 296 ND--------------DIMLVIKPGEHGS-TYGGNPLAASICVEALNVLINE 332 (433)
T ss_dssp CH--------------HHHTTCCTTCCCC-TTTTCHHHHHHHHHHHHHHHHT
T ss_pred CH--------------HHHhhhccccccc-cCCCCHHHHHHHHHHHHHHHhc
Confidence 87 4444443221111 2244667777778889887654
No 200
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.68 E-value=3.5e-17 Score=156.83 Aligned_cols=173 Identities=10% Similarity=0.037 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC----CCCeeeecCCCCCcccCccccccccceeee
Q 018231 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (359)
Q Consensus 90 ~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~----~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
...+++.+..++.+++|.+... ..++++|+| +..+++.+.++ +|+.|+++...|.+++. ++.+.
T Consensus 96 ~~~~e~~~~~~~~~~lGlp~~~---~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k--------Al~l~ 164 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVHSVA---SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMVTA 164 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHHHT
T ss_pred HHHHHHHHHHHHHHhCCCCCCc---eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH--------HHHHc
Confidence 5567777888898999997643 467777776 43334444433 38999999877766644 55677
Q ss_pred eeeeEEEecccCCCCCCCCHHHHHHHhhhhC--CcEEEEc-CCCCC--ChhhHHHHHHHHHHcCCEEEEecccccccccc
Q 018231 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVAG-ASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAA 239 (359)
Q Consensus 165 g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~--~k~v~l~-~~n~g--~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~ 239 (359)
|...+.++...+.+.+.+|+++|+++|+++. .+++++. ++++| ...|+++|+++|++||+++++|+||++.....
T Consensus 165 Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~ 244 (450)
T 3bc8_A 165 GFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKC 244 (450)
T ss_dssp TCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHH
T ss_pred CCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhh
Confidence 8777766544443567899999999997743 2344444 77776 78999999999999999999999987533221
Q ss_pred C-CCCCCC--CCceEEEeCCCCcCCCCCc-eEEEEeCC
Q 018231 240 G-VIPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (359)
Q Consensus 240 ~-~~~~~~--~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (359)
. +....+ +++|+++.|+|||+.+|.+ ++++++++
T Consensus 245 ~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~ 282 (450)
T 3bc8_A 245 MHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE 282 (450)
T ss_dssp HHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH
T ss_pred HhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH
Confidence 1 110112 3599999999999999988 66667764
No 201
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.68 E-value=1.3e-16 Score=158.51 Aligned_cols=226 Identities=13% Similarity=0.095 Sum_probs=139.6
Q ss_pred cccccCh--HHHHHHHHHHHHhh---------cCceeeCCCC-CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHH
Q 018231 26 PLEVVDP--EIADIIEHEKARQW---------KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (359)
Q Consensus 26 ~~~~~~~--~~~~~~~~~~~~~~---------~~i~l~~~~~-~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l 93 (359)
.+..+++ +++..+.+...... ..|+|..+++ .+++.+++++.+.+.. .+|+.. .+...+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~~------~g~~~l 143 (546)
T 2zy4_A 73 GVGGLAKIDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGLDPAAFLHEMVDGILG---CNYPVP------PRMLNI 143 (546)
T ss_dssp CEEECCCSTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCSS------SSCCHH
T ss_pred hhccCCccccchhHHHHHHHhcCCCCcchhHHhhhecccCCCCCCChHHHHHHHHhhhc---CCCCCC------cCCHHH
Confidence 3444444 67777766544332 1456654444 3456677777776542 133332 222233
Q ss_pred H-HHHHHHHHHHcCC--CC-CCCceeEEECCChH-HHHHHHHh-----hcCCCCeeeecCCCCCcccCccccccccceee
Q 018231 94 E-SLCQKRALEAFRL--DP-EKWGVNVQSLSGSP-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (359)
Q Consensus 94 ~-~~~~~~~a~~~g~--~~-~~~~~~v~~tsG~~-a~~~~~~a-----l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (359)
+ +.++.++.+.++. +. +. .+|++|+|++ ++..++.+ +++|||+|+++++.|+++ ...+.+
T Consensus 144 r~~ia~~~~~~~~~~~~~~~~~--~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~--------~~~~~~ 213 (546)
T 2zy4_A 144 SEKIVRQYIIREMGADAIPSES--VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPY--------IEIPEL 213 (546)
T ss_dssp HHHHHHHHHHHHTTCTTSCGGG--EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHH--------HHHHHS
T ss_pred HHHHHHHHHHHhccCCCCCCCc--ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccH--------HHHHHH
Confidence 3 3344555665543 11 11 2699999999 77767766 579999999999655543 222222
Q ss_pred e--eeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh---HHHHHHHH--HHcCCEEEEeccccc
Q 018231 164 V--SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVC--NKQKAIMLADMAHIS 234 (359)
Q Consensus 164 ~--g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~---l~~i~~la--~~~~~~vivD~a~~~ 234 (359)
. |.++..++++.+ +++.+|+++|++.+++ ++++|+++ |+| ||...+ +++|.++| +++|++||+|++++.
T Consensus 214 ~~~g~~~~~v~~~~~-~~~~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~ 291 (546)
T 2zy4_A 214 AQYALEEVAINADPS-LNWQYPDSELDKLKDP-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGT 291 (546)
T ss_dssp TTSCCEEEEEECBGG-GTTBCCHHHHGGGGST-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGG
T ss_pred cCCCcEEEEEecCcc-cCCCCCHHHHHHhhCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchh
Confidence 2 344444543222 3578999999988765 78999888 888 886554 66788888 789999999999874
Q ss_pred cccc-cCCCCCCCCCceEEEeCCCCcCC--CCCceEEEEeCC
Q 018231 235 GLVA-AGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKG 273 (359)
Q Consensus 235 g~~~-~~~~~~~~~~~D~v~~s~~K~l~--gp~gG~l~~~~~ 273 (359)
.... ..+... ..+.++++.|++|+++ |.+.|+++++++
T Consensus 292 ~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 292 FADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp GSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred hcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 3321 000000 0136799999999874 333499999875
No 202
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.68 E-value=4.9e-15 Score=143.67 Aligned_cols=242 Identities=10% Similarity=0.003 Sum_probs=141.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc---
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--- 133 (359)
.+|.|++++.+.+.+.. + ....+ ..+....++++++++++.+. .|++|+|++ ++..++..+.
T Consensus 66 ~~p~v~~A~~~~~~~~~---~-~~~~~-----~~~~~~~la~~l~~~~~~~~-----~v~~~~ggseA~~~al~~~~~~~ 131 (452)
T 3n5m_A 66 GRKELAEAAYKQLQTLS---Y-FPMSQ-----SHEPAIKLAEKLNEWLGGEY-----VIFFSNSGSEANETAFKIARQYY 131 (452)
T ss_dssp CCHHHHHHHHHHHTTCC---C-CCTTS-----EEHHHHHHHHHHHHHHTSCE-----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---C-ccccc-----CCHHHHHHHHHHHHhCCCCc-----eEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999999886521 1 11111 12233346688888888654 388888888 8888888776
Q ss_pred --C---CCCeeeecCCCCCcccCccc-----cccccceeeeeeeeEEEecccCCCCCC-CC---------HHHHHHHhh-
Q 018231 134 --K---PHDRIMALDLPHGGHLSHGY-----QTDTKKISAVSIFFETMPYRLNESTGY-ID---------YDQLEKSAT- 192 (359)
Q Consensus 134 --~---~Gd~Vl~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~v~~~~~~~~~~-~d---------~e~l~~~i~- 192 (359)
. ++|+|++.++.|.+...... ..++....-.......++.+.. -... -| +++|++.++
T Consensus 132 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (452)
T 3n5m_A 132 AQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC-YRMPGIERENIYDVECVKEVDRVMTW 210 (452)
T ss_dssp HTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT-TTSTTTTTSCGGGCHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc-ccCccCCchhhHHHHHHHHHHHHHHh
Confidence 5 88999999977765421000 0000000000001222322111 0010 12 899999987
Q ss_pred --hhCCcEEEEcC--CCCCChhh----HHHHHHHHHHcCCEEEEecccc-cccccc--CCCCCCCCCceEEEeCCCCcCC
Q 018231 193 --LFRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLR 261 (359)
Q Consensus 193 --~~~~k~v~l~~--~n~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~~s~~K~l~ 261 (359)
..++++|++++ +|+|.+.+ +++|.++|++||+++|+|++|+ +|.... .....+. ..|++++| |+++
T Consensus 211 ~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l~ 287 (452)
T 3n5m_A 211 ELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITMA--KGIT 287 (452)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGG
T ss_pred cCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEeec--cccc
Confidence 23677888874 35665555 9999999999999999999986 332211 0011110 26888776 9886
Q ss_pred CC--CceEEEEeCCcchhccCCcchhhhHHHhhcc----c-cCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhh
Q 018231 262 GP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQ----A-VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 331 (359)
Q Consensus 262 gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~----~-~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~ 331 (359)
++ +.|++++++ ++.+.+.. . ...+...+.|..+.+|..++|+.+.++...++.++.
T Consensus 288 ~G~~~ig~~~~~~--------------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 350 (452)
T 3n5m_A 288 SAYLPLSATAVKR--------------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQM 350 (452)
T ss_dssp TTSSCCEEEEEEH--------------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCCcceEEEEECH--------------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 53 339999887 55555532 1 111122345667777777889887654334444443
No 203
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.68 E-value=1.5e-15 Score=147.80 Aligned_cols=246 Identities=11% Similarity=-0.022 Sum_probs=142.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc---
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--- 133 (359)
.+|.|++++.+.+.+.. ..+... .+..+....++++++++++.+.+ .|++++|++ ++..++.++.
T Consensus 68 ~~p~v~~A~~~~~~~~~-~~~~~~------~~~~~~~~~la~~l~~~~~~~~~----~v~~~~gGseA~~~al~~~~~~~ 136 (460)
T 3gju_A 68 GRQKIADAIATQAKNLA-YYHAYV------GHGTEASITLAKMIIDRAPKGMS----RVYFGLSGSDANETNIKLIWYYN 136 (460)
T ss_dssp CCHHHHHHHHHHHHHHS-CCCCCT------TCCCHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-cccccc------ccCCHHHHHHHHHHHhhCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999998776521 111111 11112333466888888876553 499999888 9988888775
Q ss_pred -----CCCCeeeecCCCCCcccCc-----cccccccceeeeeeeeEEEeccc--CCCCCCCC--------HHHHHHHhhh
Q 018231 134 -----KPHDRIMALDLPHGGHLSH-----GYQTDTKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL 193 (359)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~d--------~e~l~~~i~~ 193 (359)
.++|+|++.++.|.+.... ....++.........+..++.+. ..++...+ +++|++.+++
T Consensus 137 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~ 216 (460)
T 3gju_A 137 NVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILA 216 (460)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHh
Confidence 3579999988777654310 01111111111111233344222 11111223 6889988863
Q ss_pred ---hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccC--CCCCCCCCceEEEeCCCCcCC
Q 018231 194 ---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLR 261 (359)
Q Consensus 194 ---~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l~ 261 (359)
.++++|++.|.+ .|.+.+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++| |+|+
T Consensus 217 ~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~-~~pdi~t~s--K~l~ 293 (460)
T 3gju_A 217 EGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYG-IKPDLITIA--KGLT 293 (460)
T ss_dssp HCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHT-CCCSEEEEC--GGGT
T ss_pred cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcC-CCCCeeeee--hhhc
Confidence 356778877544 454443 9999999999999999999986 3322100 00000 025888876 9997
Q ss_pred C--CCceEEEEeCCcchhccCCcchhhhHHHhhcc------ccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhh
Q 018231 262 G--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQ------AVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 331 (359)
Q Consensus 262 g--p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~ 331 (359)
| .+.|++++++ ++.+.+.. ....+...+.|..+.+|..++|+.+.++...++.++.
T Consensus 294 gG~~~lg~v~~~~--------------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 357 (460)
T 3gju_A 294 SAYAPLSGVIVAD--------------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGET 357 (460)
T ss_dssp TTSSCCEEEEEEH--------------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCCCCeEEEEECH--------------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 6 3558999888 44444421 1111222345667777888889887655434444443
No 204
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.67 E-value=4.3e-16 Score=148.55 Aligned_cols=222 Identities=14% Similarity=0.134 Sum_probs=139.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.+|.+.+++.+.+.+.. .+. ..+.. +... .+++++++++|.+ +|++|+|++ ++..++.+++.
T Consensus 56 ~~p~v~~a~~~~~~~~~--~~~--~~~~~-~~~~----~l~~~la~~~~~~------~v~~~~gg~~a~~~al~~~~~~~ 120 (406)
T 4adb_A 56 AHPELREALNEQASKFW--HTG--NGYTN-EPVL----RLAKKLIDATFAD------RVFFCNSGAEANEAALKLARKFA 120 (406)
T ss_dssp TCHHHHHHHHHHHTTCS--CCC--TTSCC-HHHH----HHHHHHHHHSSCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--ccc--CCcCC-HHHH----HHHHHHHhhCCCC------eEEEeCcHHHHHHHHHHHHHHHH
Confidence 47999999999886522 111 11221 2223 3668899999865 388888888 88878887754
Q ss_pred -----CC-CeeeecCCCCCcccCccccccc-----cceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhhCCcEEEEcC
Q 018231 135 -----PH-DRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (359)
Q Consensus 135 -----~G-d~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~ 203 (359)
+| |+|++.++.|++.......... ....-.+..+..++ . .|+++|++.+++ ++++|+++|
T Consensus 121 ~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~d~~~l~~~l~~-~~~~v~~~p 191 (406)
T 4adb_A 121 HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAA--Y------NDINSASALIDD-STCAVIVEP 191 (406)
T ss_dssp HHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEEC--T------TCHHHHHTTCST-TEEEEEECS
T ss_pred HhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeC--C------CcHHHHHHHhcC-CeEEEEEeC
Confidence 66 9999999777665321110000 00000011122221 2 389999999986 899999987
Q ss_pred CC-CC-----ChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCC---CC-CceEEEeCCCCcCCC-CCceEEEEeC
Q 018231 204 SA-YA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FE-YADVVTTTTHKSLRG-PRGAMIFFRK 272 (359)
Q Consensus 204 ~n-~g-----~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~---~~-~~D~v~~s~~K~l~g-p~gG~l~~~~ 272 (359)
+| +| ...++++|.++|++||+++|+|++|+ |....+. ... +. ..|++++ +|++++ .+.|++++++
T Consensus 192 ~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~-~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~ 267 (406)
T 4adb_A 192 IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGE-LYAYMHYGVTPDLLTT--AKALGGGFPVGALLATE 267 (406)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSS-SSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECH
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccch-hHHHHhcCCCCCEEEe--chhhcCCCCeEEEEEcH
Confidence 66 66 34579999999999999999999996 3211111 000 01 2588866 799863 2359988877
Q ss_pred CcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 273 GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++.+.+..... +...+.+....+++.++++.+..+
T Consensus 268 --------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~ 302 (406)
T 4adb_A 268 --------------ECARVMTVGTH-GTTYGGNPLASAVAGKVLELINTP 302 (406)
T ss_dssp --------------HHHHTCCTTSS-CCSSTTCHHHHHHHHHHHHHHSSH
T ss_pred --------------HHHhhhccCCc-CCCCCCCHHHHHHHHHHHHHHHhc
Confidence 55555443211 122356677778888888877553
No 205
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.67 E-value=9.1e-17 Score=153.64 Aligned_cols=155 Identities=16% Similarity=0.170 Sum_probs=113.7
Q ss_pred HHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 97 ~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+++.+++++|.+. .++++||+.++.+ +.+++++||+|++.++.|++.+...... +....|.++..++ .+
T Consensus 72 l~~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~---~~~~~g~~~~~v~--~~ 140 (400)
T 3nmy_A 72 YERCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERV---RRRTAGLDFSFVD--LT 140 (400)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHT---HHHHHCCEEEEEC--TT
T ss_pred HHHHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHh---hHhhcCeEEEEEC--CC
Confidence 4478889998763 4777778558774 6778999999999997777554322110 0112355554443 33
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEe
Q 018231 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (359)
|++++++++++ ++++|+++ ++| +|.+.|+++|+++|++||+++|+|++|+.+...... .. ++|+++.
T Consensus 141 ------d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~div~~ 209 (400)
T 3nmy_A 141 ------DPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL-SL---GADLVVH 209 (400)
T ss_dssp ------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG-GG---TCSEEEE
T ss_pred ------CHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hc---CCcEEEe
Confidence 89999999987 89999987 777 888899999999999999999999999765543211 12 4899999
Q ss_pred CCCCcCCCC---Cce-EEEEeCC
Q 018231 255 TTHKSLRGP---RGA-MIFFRKG 273 (359)
Q Consensus 255 s~~K~l~gp---~gG-~l~~~~~ 273 (359)
|++|+|+|+ .|| +++++++
T Consensus 210 S~sK~l~g~g~~~gG~~vv~~~~ 232 (400)
T 3nmy_A 210 SATKYLNGHSDMVGGIAVVGDNA 232 (400)
T ss_dssp ETTTTTTCSSSCCCEEEEECSCH
T ss_pred cCccccCCCCCcceeEEEEeCCH
Confidence 999999877 357 5666553
No 206
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.67 E-value=1.9e-15 Score=146.26 Aligned_cols=233 Identities=14% Similarity=0.123 Sum_probs=139.4
Q ss_pred CceeeCCCC--C---CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 48 GLELIPSEN--F---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~~~--~---~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.+++.++.+ . .+|.+++++.+.+.... ... +.+. .+...+ +++++++++|.+ .|++++|+
T Consensus 78 ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~---~~~-~~~~-~~~~~~----l~~~la~~~g~~------~v~~~~sG 142 (439)
T 2oat_A 78 YFDFLSSYSAVNQGHCHPKIVNALKSQVDKLT---LTS-RAFY-NNVLGE----YEEYITKLFNYH------KVLPMNTG 142 (439)
T ss_dssp EEESSGGGGTTTTCBTCHHHHHHHHHHHTTCS---CCC-TTSE-ESSHHH----HHHHHHHHHTCS------EEEEESSH
T ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHHhcC---ccc-CccC-CHHHHH----HHHHHHHhcCCC------EEEEeCCH
Confidence 356555432 2 67999999999886521 111 1111 122343 447788888743 38888888
Q ss_pred H-HHHHHHHhhc---------CCC-CeeeecCCCCCcccCccccccc-----cceeeeeeeeEEEecccCCCCCCCCHHH
Q 018231 123 P-SNFQVYTALL---------KPH-DRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLNESTGYIDYDQ 186 (359)
Q Consensus 123 ~-a~~~~~~al~---------~~G-d~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~~~~~~~~~~~d~e~ 186 (359)
+ ++..++.++. .+| |+|+++++.|.+.......... .+..-....+..++ . .|+++
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~--~------~d~~~ 214 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP--Y------NDLPA 214 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEEC--S------SCHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeC--C------CCHHH
Confidence 8 8887777654 467 8999998776554211110000 00000001222232 2 28999
Q ss_pred HHHHhhhhCCcEEEEcCCC--CCChh----hHHHHHHHHHHcCCEEEEeccccccccccCC----CCCCCCCceEEEeCC
Q 018231 187 LEKSATLFRPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTT 256 (359)
Q Consensus 187 l~~~i~~~~~k~v~l~~~n--~g~~~----~l~~i~~la~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~v~~s~ 256 (359)
|++.++..++++|++.|.+ +|.+. ++++|.++|++||+++|+|++|+ |....+. ...+ -..|++++|
T Consensus 215 le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~g~~g~~~~~~~~~-~~~Di~t~s- 291 (439)
T 2oat_A 215 LERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-GLARTGRWLAVDYEN-VRPDIVLLG- 291 (439)
T ss_dssp HHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGT-CCCSEEEEC-
T ss_pred HHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCCcchhHHHhC-CCCcEEEec-
Confidence 9999953277888877543 57554 79999999999999999999994 4321111 1111 026887554
Q ss_pred CCcCCCC--CceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 257 HKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 257 ~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
|+|+++ ++|++++++ ++.+.+........ .+.|....++..++++.+.++
T Consensus 292 -K~l~~G~~~~G~v~~~~--------------~~~~~l~~~~~~~t-~~~~~~~~aaa~aal~~~~~~ 343 (439)
T 2oat_A 292 -KALSGGLYPVSAVLCDD--------------DIMLTIKPGEHGST-YGGNPLGCRVAIAALEVLEEE 343 (439)
T ss_dssp -GGGGTTSSCCEEEEECH--------------HHHTTSCTTSSCCS-STTCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCCCeEEEEECH--------------HHHhccCCCCcccC-CCcCHHHHHHHHHHHHHHhhh
Confidence 999764 569999987 44444432211112 244567777778889887654
No 207
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.67 E-value=1.1e-15 Score=147.51 Aligned_cols=242 Identities=11% Similarity=0.074 Sum_probs=140.7
Q ss_pred cCceeeCCCC-----CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~~-----~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..+++.++.. ..+|.+++++.+.+.... .+... .+..+....++++++++++...++ .+++++|
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~------~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g 112 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANPA--GATIL------SASNAPAVTLAERLLASFPGEGTH---KIWFGHS 112 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCS--CSCSS------SSEEHHHHHHHHHHHHTTTCTTTE---EEEEESS
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhcc--Ccccc------ccCCHHHHHHHHHHHHhCCCCCCC---EEEEeCC
Confidence 3467765554 258999999998877521 11111 111233344668899998654421 4888888
Q ss_pred hH-HHHHHHHhh--cCCCCeeeecCCCCCcccCcccccc-------ccceeeeeeeeEEEecccCCCCCCC-----CHHH
Q 018231 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTD-------TKKISAVSIFFETMPYRLNESTGYI-----DYDQ 186 (359)
Q Consensus 122 ~~-a~~~~~~al--~~~Gd~Vl~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~v~~~~~~~~~~~-----d~e~ 186 (359)
++ ++..++.++ ..++++|++.++.|.+......... +....-....+..++ .+ +.+.. |+++
T Consensus 113 gsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~d~~~ 189 (439)
T 3dxv_A 113 GSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDP--YR-PYRNDPTGDAILTL 189 (439)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCS--SS-CBTTBTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcC--CC-cccccccHHHHHHH
Confidence 88 888777775 3467788888866654322111000 000000000011122 21 11112 7899
Q ss_pred HHHHhh---hhCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCC----CCCCCCCceEEE
Q 018231 187 LEKSAT---LFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVT 253 (359)
Q Consensus 187 l~~~i~---~~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~v~ 253 (359)
|++.+. ..++++|++++++ +|.+.+ +++|.++|++||+++|+|++|+ |....+. .... -..|+++
T Consensus 190 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~-~~~di~s 267 (439)
T 3dxv_A 190 LTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEG-FVPDILV 267 (439)
T ss_dssp HHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTT-CCCSEEE
T ss_pred HHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcC-CCCCEEE
Confidence 999994 3367788877433 566666 9999999999999999999996 3211110 0011 0267875
Q ss_pred eCCCCcCCC-CCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 254 TTTHKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 254 ~s~~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
+| |++++ .+.|++++++ ++.+.+........ . .+....++..++++.+.++
T Consensus 268 ~s--K~~~~G~riG~~~~~~--------------~~~~~~~~~~~~~t-~-~~~~~~~aa~aal~~~~~~ 319 (439)
T 3dxv_A 268 LG--KGLGGGLPLSAVIAPA--------------EILDCASAFAMQTL-H-GNPISAAAGLAVLETIDRD 319 (439)
T ss_dssp EC--GGGGTTSCCEEEEEEH--------------HHHTSCSSSSCCTT-T-TCHHHHHHHHHHHHHHHHT
T ss_pred Ec--chhcCCcceEEEEECH--------------HHHhhhcCCCcCCC-c-ccHHHHHHHHHHHHHHHhc
Confidence 55 98864 3349999887 55554433211112 2 5667777777888877654
No 208
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.66 E-value=1.6e-15 Score=146.99 Aligned_cols=234 Identities=13% Similarity=0.093 Sum_probs=140.3
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.++.|++++.+.+.+ + ++.....+. .+ +...+++.++++++.+.+ .|++|+|++ ++..++.++..
T Consensus 67 ~~~~v~~a~~~~~~~-~--~~~~~~~~~-~~----~~~~l~~~la~~~~~~~~----~v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLST-L--DYSPGFQYG-HP----LSFQLAEKITDLTPGNLN----HVFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTT-C--SCCCSSSCC-CH----HHHHHHHHHHTTSSTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-C--CCccccccC-CH----HHHHHHHHHHHhCCCCCC----EEEEcCcHHHHHHHHHHHHHHHH
Confidence 479999999998765 2 111000111 12 222366888888877653 499999888 88878777653
Q ss_pred ------CCCeeeecCCCCCcccCccccccc-----c--ceeeeeeeeEEEecccCC-CC-CCCC--------HHHHHHHh
Q 018231 135 ------PHDRIMALDLPHGGHLSHGYQTDT-----K--KISAVSIFFETMPYRLNE-ST-GYID--------YDQLEKSA 191 (359)
Q Consensus 135 ------~Gd~Vl~~~~~~~~~~~~~~~~~~-----~--~~~~~g~~~~~v~~~~~~-~~-~~~d--------~e~l~~~i 191 (359)
+||+|++.++.|.+.......... . .....+ +..++++... .. ..+| +++|++.+
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l 212 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQD--VDHLPHTLLASNAYSRGMPKEGGIALADELLKLI 212 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCS--EEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCC--CeEecCCccccCccccCChHHHHHHHHHHHHHHH
Confidence 789999988777654321110000 0 000112 2334332210 11 1246 99999998
Q ss_pred hh---hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEecccc-cccccc--CCCCCCCCCceEEEeCCCCc
Q 018231 192 TL---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKS 259 (359)
Q Consensus 192 ~~---~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~~s~~K~ 259 (359)
++ .++++|+++|.+ +|.+.+ +++|.++|++||+++|+|++|+ +|.... .....+ -..|++++| |+
T Consensus 213 ~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~-~~~di~s~s--K~ 289 (449)
T 3a8u_X 213 ELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFG-VTPDLMCIA--KQ 289 (449)
T ss_dssp HHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEEEEC--GG
T ss_pred HhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcC-CCCCEEEEc--cc
Confidence 73 256777777543 787777 9999999999999999999994 543211 000000 025888665 99
Q ss_pred CCC--CCceEEEEeCCcchhccCCcchhhhHHHhhcccc--------CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 260 LRG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--------FPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 260 l~g--p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
|++ .+.|++++++ ++.+.+.... ..+...+.|..+.+++.++|+.+.++
T Consensus 290 l~~G~~~~G~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~ 348 (449)
T 3a8u_X 290 VTNGAIPMGAVIAST--------------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKE 348 (449)
T ss_dssp GGTTSSCCEEEEEEH--------------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCceEEEEECH--------------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhc
Confidence 976 3468888887 4444433210 11112345677788888899887754
No 209
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.66 E-value=1.2e-15 Score=146.91 Aligned_cols=236 Identities=14% Similarity=0.073 Sum_probs=132.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc---
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--- 133 (359)
.+|.|++++.+.+.+ .. .+... .+..+....++++++++++.+.+ .|++|+|++ ++..++.+++
T Consensus 46 ~~p~v~~a~~~~~~~-~~-~~~~~------~~~~~~~~~l~~~la~~~~~~~~----~v~~~~gg~ea~~~al~~~~~~~ 113 (430)
T 3i4j_A 46 GRAEVGERMAAQAAR-LP-FVHGS------QFSSDVLEEYAGRLARFVGLPTF----RFWAVSGGSEATESAVKLARQYH 113 (430)
T ss_dssp CCHHHHHHHHHHHHH-CC-CCCTT------TCEEHHHHHHHHHHHHHTTCTTC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc-ccccc------ccCCHHHHHHHHHHHHhCCCCCC----EEEEeCcHHHHHHHHHHHHHHHH
Confidence 389999999988765 21 11111 11122333466889999987664 499999988 8887887775
Q ss_pred -----CCCCeeeecCCCCCcccCccccccccce-e--e--eee--eeEEEecccCCCCCCCCHHHHHHHhhh---hCCcE
Q 018231 134 -----KPHDRIMALDLPHGGHLSHGYQTDTKKI-S--A--VSI--FFETMPYRLNESTGYIDYDQLEKSATL---FRPKL 198 (359)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~-~--~--~g~--~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~~k~ 198 (359)
.+||+|++.++.|++........-.... . . ... .+..++.+.....+..|+++|++.+++ .++++
T Consensus 114 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~ 193 (430)
T 3i4j_A 114 VERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAA 193 (430)
T ss_dssp HHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEE
T ss_pred HhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEE
Confidence 4578999998776654321110000000 0 0 000 111122110000012366889988873 35666
Q ss_pred EEEcCCC---CCChhh----HHHHHHHHHHcCCEEEEecccc-cccccc--CCCCC-CCCCceEEEeCCCCcCCC--CCc
Q 018231 199 IVAGASA---YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPS-PFEYADVVTTTTHKSLRG--PRG 265 (359)
Q Consensus 199 v~l~~~n---~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~--~~~~~-~~~~~D~v~~s~~K~l~g--p~g 265 (359)
|+++|+| +|...+ +++|.++|++||+++|+|++|+ +|.... ..... + -..|++++| |++++ .+-
T Consensus 194 vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~-~~~di~t~s--K~l~~G~~r~ 270 (430)
T 3i4j_A 194 FMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSG-VTPDIAVLG--KGLAAGYAPL 270 (430)
T ss_dssp EEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTT-CCCSEEEEC--GGGTTTSSCC
T ss_pred EEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcC-CCCcEEEEc--ccccCCcccc
Confidence 7766543 344444 9999999999999999999986 322110 01111 1 025788776 99865 333
Q ss_pred eEEEEeCCcchhccCCcchhhhHHHhhcccc---CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 266 AMIFFRKGVKEINKQGKEVFYDYEEKINQAV---FPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 266 G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
|++++++ ++.+.+.... ..+...+.+..+.+|..++|+.+.++
T Consensus 271 G~~~~~~--------------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 316 (430)
T 3i4j_A 271 AGLLAAP--------------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVERE 316 (430)
T ss_dssp EEEEECH--------------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred EEEEECH--------------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcc
Confidence 8998877 5555544321 11222355677778888889877654
No 210
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.65 E-value=2.9e-15 Score=145.65 Aligned_cols=242 Identities=12% Similarity=-0.016 Sum_probs=140.6
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.+|.|.+|+.+.+.+.. .. . ...+. .+....++++++++++.+.+ .|++++|++ ++..++..+..
T Consensus 92 ~~p~v~~A~~~~~~~~~-~~-~-~~~~~-----~~~~~~L~e~la~~~~~~~~----~v~~~~sGseA~~~Alk~a~~~~ 159 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMN-HV-M-FGGLT-----HEPAARLAKLLVDITPAGLD----TVFFSDSGSVSVEVAAKMALQYW 159 (457)
T ss_dssp TCHHHHHHHHHHHHHCS-CC-C-SSSEE-----CHHHHHHHHHHHHHSSTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-Cc-c-ccccC-----CHHHHHHHHHHHHhCCCCcC----EEEEeCcHHHHHHHHHHHHHHHH
Confidence 58999999998876521 11 1 01111 12222366899999976553 489998888 88888877653
Q ss_pred -----CC-CeeeecCCCCCcccCcc------ccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh--hCCcEEE
Q 018231 135 -----PH-DRIMALDLPHGGHLSHG------YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIV 200 (359)
Q Consensus 135 -----~G-d~Vl~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~~k~v~ 200 (359)
+| ++|++.+..|.+..... ...++............++++.. .....|+++|++.+++ .++++|+
T Consensus 160 ~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~~~aavi 238 (457)
T 3tfu_A 160 RGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAGELAAVV 238 (457)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGGGEEEEE
T ss_pred HhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCCCEEEEE
Confidence 55 48888887665532100 00000000000111233443322 1123588999999873 2677887
Q ss_pred EcC-CC--CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccCC--CCCCCCCceEEEeCCCCcCCC--CCceEE
Q 018231 201 AGA-SA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRG--PRGAMI 268 (359)
Q Consensus 201 l~~-~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~g--p~gG~l 268 (359)
+.+ .+ +|...+ +++|.++|++||+++|+|++|+ +|...... ...+ -..|++++| |+++| .+.|++
T Consensus 239 ~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~-~~pdiit~s--K~l~gG~~~lG~v 315 (457)
T 3tfu_A 239 VEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAG-VSPDIMCVG--KALTGGYLSLAAT 315 (457)
T ss_dssp ECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT-CCCSEEEEC--GGGGTTSSCCEEE
T ss_pred EeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcC-CCceEEEEC--hhhhCCCcceEEE
Confidence 776 33 565443 9999999999999999999985 22211100 0000 025888666 99977 356999
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccc--c--CCCCCCCCcHHHHHHHHHHHHHHhccccchhHh
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQA--V--FPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 329 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~--~--~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~ 329 (359)
++++ ++.+.+... . ..+...+.|..+.+|..++|+.+.++...++.+
T Consensus 316 ~~~~--------------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~ 366 (457)
T 3tfu_A 316 LCTA--------------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRIT 366 (457)
T ss_dssp EEEH--------------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred EEcH--------------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 9988 455544211 0 112223456777778888898887653333333
No 211
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.65 E-value=3.6e-15 Score=143.80 Aligned_cols=240 Identities=11% Similarity=0.053 Sum_probs=140.8
Q ss_pred cCceeeCCC--C---CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~--~---~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..+++.++. + ..+|.|++++.+.+.+....++ +. ....+ ++++++++++ +.+ .|++++|
T Consensus 56 ~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~------~~-~~~~~----l~~~la~~~~-~~~----~v~~~~s 119 (434)
T 3l44_A 56 KYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGT------PT-ALEVK----FAKMLKEAMP-ALD----KVRFVNS 119 (434)
T ss_dssp EEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSS------CC-HHHHH----HHHHHHHHCT-TCS----EEEEESS
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCC------CC-HHHHH----HHHHHHHhCC-CCC----EEEEeCc
Confidence 346665543 2 2489999999988765221111 11 22222 5578888886 443 4899988
Q ss_pred hH-HHHHHHHhhcC--CCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCC-------------CCHH
Q 018231 122 SP-SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY-------------IDYD 185 (359)
Q Consensus 122 ~~-a~~~~~~al~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-------------~d~e 185 (359)
++ ++..++..+.. ++|+|+++++.|.+...... ...+........+.. .+. .|++
T Consensus 120 Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~-------~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~ 190 (434)
T 3l44_A 120 GTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVL-------VAAGSGPSTLGTPDS--AGVPQSIAQEVITVPFNNVE 190 (434)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGG-------BC-------CCCBSS--TTCCHHHHTTEEEECTTCHH
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHH-------hhcCCcccccCCCCc--CCCCCcCCCceEecCcccHH
Confidence 88 88877776643 78999999877665432111 011110000000000 000 1899
Q ss_pred HHHHHhhh--hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCCCC-C-CCC-CceEEEe
Q 018231 186 QLEKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-S-PFE-YADVVTT 254 (359)
Q Consensus 186 ~l~~~i~~--~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~-~-~~~-~~D~v~~ 254 (359)
+|++.+++ .++++|+++|+| +|.+.+ +++|.++|++||+++|+|++|+ |. ..+... . .+. ..|++++
T Consensus 191 ~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~~~~di~t~ 268 (434)
T 3l44_A 191 TLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVTPDLTAL 268 (434)
T ss_dssp HHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHTCCCSEEEE
T ss_pred HHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcCCCCCeeeh
Confidence 99998874 256777777555 455555 9999999999999999999985 22 111000 0 000 2578777
Q ss_pred CCCCcCCCCCc-eEEEEeCCcchhccCCcchhhhHHHhhccc--cCCCCCCCCcHHHHHHHHHHHHHHhccccchhHh
Q 018231 255 TTHKSLRGPRG-AMIFFRKGVKEINKQGKEVFYDYEEKINQA--VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 329 (359)
Q Consensus 255 s~~K~l~gp~g-G~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~ 329 (359)
| |+++++-. |++++++ ++.+.+... ...+...+.|..+.+|..++++.+.++...++.+
T Consensus 269 s--K~~~~G~~iG~~~~~~--------------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~ 330 (434)
T 3l44_A 269 G--KVIGGGLPIGAYGGKK--------------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLD 330 (434)
T ss_dssp E--GGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHH
T ss_pred h--hhhcCCcCeeeEEEcH--------------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHH
Confidence 6 98864333 8888877 555544331 1112224567777888888998877643333333
No 212
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.64 E-value=6.2e-16 Score=150.43 Aligned_cols=243 Identities=11% Similarity=-0.028 Sum_probs=140.9
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.+|.|++|+.+.+.+.. ..+... .+ ..+....++++++++++.+.+ .|++++|++ ++..++..+..
T Consensus 67 ~~p~v~~A~~~~~~~~~-~~~~~~-~~-----~~~~~~~la~~l~~~~~~~~~----~v~~~~ggseA~~~al~~~~~~~ 135 (459)
T 4a6r_A 67 GRKDFAEAARRQMEELP-FYNTFF-KT-----THPAVVELSSLLAEVTPAGFD----RVFYTNSGSESVDTMIRMVRRYW 135 (459)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCTTS-SS-----CCHHHHHHHHHHHHHSCTTCC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-cccccc-cc-----CCHHHHHHHHHHHHhCCCCCC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999998876521 111111 11 122333466889999887654 499999888 88888887764
Q ss_pred ------CCCeeeecCCCCCcccCc-----cccccccceeeeeeeeEEEeccc--CCCCCCCC--------HHHHHHHhhh
Q 018231 135 ------PHDRIMALDLPHGGHLSH-----GYQTDTKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL 193 (359)
Q Consensus 135 ------~Gd~Vl~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~d--------~e~l~~~i~~ 193 (359)
++|+|++.++.|.+...- ....++.........+..++++. ...++ .| +++|++.+.+
T Consensus 136 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~ 214 (459)
T 4a6r_A 136 DVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILE 214 (459)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHH
Confidence 679999998777654310 00011100001111223343222 10112 45 7889888863
Q ss_pred ---hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccC--CCCCCCCCceEEEeCCCCcCC
Q 018231 194 ---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLR 261 (359)
Q Consensus 194 ---~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l~ 261 (359)
.++++|++.|.+ .|...+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++| |+++
T Consensus 215 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~-~~pdi~t~s--K~l~ 291 (459)
T 4a6r_A 215 IGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFG-FQPDLFTAA--KGLS 291 (459)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEEEEC--GGGG
T ss_pred cCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcC-CCCCeeehh--hhhc
Confidence 256677776544 444444 9999999999999999999986 3222100 00000 025888876 9986
Q ss_pred C--CCceEEEEeCCcchhccCCcchhhhHHHhhccc--cCCCCCCCCcHHHHHHHHHHHHHHhccccchhHh
Q 018231 262 G--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA--VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 329 (359)
Q Consensus 262 g--p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~ 329 (359)
+ .+-|++++++ ++.+.+... ...+...+.|..+.+|..++|+.+.++...++.+
T Consensus 292 gg~~~lg~v~~~~--------------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 349 (459)
T 4a6r_A 292 SGYLPIGAVFVGK--------------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVK 349 (459)
T ss_dssp TTSSCCEEEEECH--------------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCCCCccceeeCH--------------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence 5 3448888877 444444311 0000112445667777778898876554444444
No 213
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.64 E-value=1.5e-14 Score=141.38 Aligned_cols=243 Identities=9% Similarity=0.018 Sum_probs=142.6
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc---
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--- 133 (359)
.+|.|++|+.+.+.+ ...++.. . .. .+....++++++++++.+.+ .|++++|++ ++..++..+.
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~--~-~~----~~~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~Aik~a~~~~ 138 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW--Y-MA----TSPAARLAEKIATLTPGDLN----RIFFTTGGSTAVDSALRFSEFYN 138 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT--T-CB----CHHHHHHHHHHHTTSSTTCC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC--c-cC----CHHHHHHHHHHHhcCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 589999999998765 2111111 1 11 12333466889998876543 488888888 8888887764
Q ss_pred -----CCCCeeeecCCCCCcccCc-----cccccccce--eeeeeeeEEEecccCCCCCCCC--------HHHHHHHhhh
Q 018231 134 -----KPHDRIMALDLPHGGHLSH-----GYQTDTKKI--SAVSIFFETMPYRLNESTGYID--------YDQLEKSATL 193 (359)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~-----~~~~~~~~~--~~~g~~~~~v~~~~~~~~~~~d--------~e~l~~~i~~ 193 (359)
..+++|++.++.|.+.... ....++... ...+ +..++++.....+..| +++|++.+++
T Consensus 139 ~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~ 216 (476)
T 3i5t_A 139 NVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDR--ISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIES 216 (476)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTT--EEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCC--cEEeCCCcccccCCCchHHHHHHHHHHHHHHHHh
Confidence 3467899988777654310 111111100 1112 2233322210111122 7889988863
Q ss_pred ---hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEecccc-cccccc--CCC-CCCCCCceEEEeCCCCcC
Q 018231 194 ---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVI-PSPFEYADVVTTTTHKSL 260 (359)
Q Consensus 194 ---~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~--~~~-~~~~~~~D~v~~s~~K~l 260 (359)
.++++|++.+.+ .|.+.+ +++|.++|++||+++|+|++|+ +|.... ... ..+. ..|++++| |++
T Consensus 217 ~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l 293 (476)
T 3i5t_A 217 LGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGV 293 (476)
T ss_dssp HCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGG
T ss_pred cCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhh
Confidence 356788887444 454333 9999999999999999999986 322210 001 1111 25888876 998
Q ss_pred CCC--CceEEEEeCCcchhccCCcchhhhHHHhhcccc------CCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhh
Q 018231 261 RGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV------FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 331 (359)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~ 331 (359)
+++ +-|++++++ ++.+.+.... ..+...+.|..+.+|..++|+.+.++...++.++.
T Consensus 294 ~~G~~plg~v~~~~--------------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~ 358 (476)
T 3i5t_A 294 TSGYVPLGGLAISE--------------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREM 358 (476)
T ss_dssp GTTSSCCEEEEECH--------------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred cCCCcCeEEEEECH--------------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 763 448888877 5555554321 12222345667778888899888655433444433
No 214
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.64 E-value=6.7e-15 Score=142.65 Aligned_cols=242 Identities=8% Similarity=-0.008 Sum_probs=135.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.+|.|.+++.+.+.+.. . +... .+..+....++++++++++...+ .|++++|++ ++..++.++..
T Consensus 61 ~~p~v~~A~~~~~~~~~-~-~~~~------~~~~~~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~al~~~~~~~ 128 (448)
T 3dod_A 61 RKKELDDAIKKQLGKIA-H-STLL------GMTNVPATQLAETLIDISPKKLT----RVFYSDSGAEAMEIALKMAFQYW 128 (448)
T ss_dssp SCHHHHHHHHHHHTTCS-C-CCCS------SSEEHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-C-cccc------ccCCHHHHHHHHHHHHhCCCCCC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999999886521 1 1111 11112333466889999876543 489999888 88888877754
Q ss_pred --CC----CeeeecCCCCCcccCccccc-----cccceeeeeeeeEEEecccCCCCCCC-----------CHHHHHHHhh
Q 018231 135 --PH----DRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYI-----------DYDQLEKSAT 192 (359)
Q Consensus 135 --~G----d~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~-----------d~e~l~~~i~ 192 (359)
+| |+|++.++.|.+........ ++....-....+..++. . +.+.. |+++|++.++
T Consensus 129 ~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~d~~~le~~l~ 205 (448)
T 3dod_A 129 KNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--P-YVYRSESGDPDECRDQCLRELAQLLE 205 (448)
T ss_dssp HHTTCTTCCEEEEEC-----------------------------CEEECC--C-CCTTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--C-ccccCCccchhhhhHHHHHHHHHHHH
Confidence 44 99999997765542111100 00000000011222321 1 22222 4889999887
Q ss_pred --hhCCcEEEEcCC--C-CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccC--CCCCCCCCceEEEeCCCCcC
Q 018231 193 --LFRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSL 260 (359)
Q Consensus 193 --~~~~k~v~l~~~--n-~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l 260 (359)
..++++|++.|. + .|...+ +++|.++|++||+++|+|++|+ +|..... ....+. ..|++++| |++
T Consensus 206 ~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l 282 (448)
T 3dod_A 206 EHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGI 282 (448)
T ss_dssp HHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGG
T ss_pred hCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccc
Confidence 225667777643 4 564444 9999999999999999999986 3321110 001110 25788776 998
Q ss_pred CCC--CceEEEEeCCcchhccCCcchhhhHHHhhccc------cCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhh
Q 018231 261 RGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA------VFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 331 (359)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~ 331 (359)
+++ +.|++++++ ++.+.+... ...+...+.+....+|..++|+.+.++...++.++.
T Consensus 283 ~~G~~~ig~v~~~~--------------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 347 (448)
T 3dod_A 283 TGGYLPIAVTFATE--------------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEK 347 (448)
T ss_dssp GTTSSCCEEEEEEH--------------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred cCCcCceEEEEECH--------------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 653 448899887 555555430 111122345667778888889887654333444433
No 215
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.63 E-value=9.2e-15 Score=139.13 Aligned_cols=213 Identities=14% Similarity=0.103 Sum_probs=135.5
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.++.+.+++.+.+.. + +... ..|. ....+.+++++++++|.+ +|++++|++ ++..++.++..
T Consensus 57 ~~~~v~~a~~~~~~~-~--~~~~-~~~~-----~~~~~~l~~~la~~~g~~------~v~~~~gg~~a~~~al~~~~~~~ 121 (397)
T 2ord_A 57 SHPRLVEAIKDQAEK-L--IHCS-NLFW-----NRPQMELAELLSKNTFGG------KVFFANTGTEANEAAIKIARKYG 121 (397)
T ss_dssp TCHHHHHHHHHHHHH-C--SCCC-TTSE-----EHHHHHHHHHHHHTTTSC------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-c--ccCc-cccC-----CHHHHHHHHHHHHhcCCC------eEEEeCCHHHHHHHHHHHHHHHh
Confidence 589999999998865 2 1111 1121 122233668889988843 488888888 88877777753
Q ss_pred ----C-CCeeeecCCCCCcccCccccccccceeeeeee------------eEEEecccCCCCCCCCHHHHHHHhhhhCCc
Q 018231 135 ----P-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIF------------FETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (359)
Q Consensus 135 ----~-Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~d~e~l~~~i~~~~~k 197 (359)
+ +|+|+++++.|.+..... +...|.. +..++ . .|+++|++.+++ +++
T Consensus 122 ~~~~~~~~~vi~~~~~yh~~~~~~-------~~~~g~~~~~~~~~p~~~~~~~~~--~------~d~~~l~~~l~~-~~~ 185 (397)
T 2ord_A 122 KKKSEKKYRILSAHNSFHGRTLGS-------LTATGQPKYQKPFEPLVPGFEYFE--F------NNVEDLRRKMSE-DVC 185 (397)
T ss_dssp HHHCTTCCEEEEEBTCCCCSSHHH-------HHHSBCHHHHGGGCSCCTTEEEEC--T------TCHHHHHHHCCT-TEE
T ss_pred hcCCCCCceEEEEcCCcCCCchhh-------hhccCChhhccccCCCCCCeeEec--C------CCHHHHHHHhhc-CeE
Confidence 5 578998886665432211 1112221 22232 2 289999999987 899
Q ss_pred EEEEc-CCC-CCC----hhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCC---C-CceEEEeCCCCcCCCCC-ce
Q 018231 198 LIVAG-ASA-YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E-YADVVTTTTHKSLRGPR-GA 266 (359)
Q Consensus 198 ~v~l~-~~n-~g~----~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~---~-~~D~v~~s~~K~l~gp~-gG 266 (359)
+|+++ ++| +|. ..++++|.++|++||+++|+|++|+ |....+. ..++ . ..|++++ +|+|+++. .|
T Consensus 186 ~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~-~~~~~~~~~~~d~~s~--sK~~~~G~r~G 261 (397)
T 2ord_A 186 AVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGK-LFAYQKYGVVPDVLTT--AKGLGGGVPIG 261 (397)
T ss_dssp EEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSHHHHHTCCCSEEEE--CGGGGTTSCCE
T ss_pred EEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCcc-chhhhhhCCCCCeeee--ccccCCCcCeE
Confidence 99998 666 786 4689999999999999999999996 4322111 1110 1 2688766 59997433 39
Q ss_pred EEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 267 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 267 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+++++++ +. .+... ......+++....+++.++|+.+.+
T Consensus 262 ~~~~~~~--------------~~-~l~~~-~~~~~~~~~~~~~~a~~~~l~~~~~ 300 (397)
T 2ord_A 262 AVIVNER--------------AN-VLEPG-DHGTTFGGNPLACRAGVTVIKELTK 300 (397)
T ss_dssp EEEECST--------------TC-CCCTT-SSCCSSTTCHHHHHHHHHHHHHHTS
T ss_pred EEEEchH--------------hc-ccCCC-CcCCCCCCCHHHHHHHHHHHHHHHh
Confidence 9998874 22 22211 1111234567777888888988765
No 216
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.63 E-value=3.5e-15 Score=145.70 Aligned_cols=241 Identities=12% Similarity=0.038 Sum_probs=140.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.+|.|++|+.+.+.. ....+... .+..+....++++++++++.+.+ .|++++|++ ++..++..+..
T Consensus 72 ~~p~v~~A~~~~~~~-~~~~~~~~------~~~~~~~~~lae~l~~~~~~~~~----~v~~~~sGseA~~~aik~a~~~~ 140 (472)
T 3hmu_A 72 GRDELAEVAARQMRE-LPYYNTFF------KTTHVPAIALAQKLAELAPGDLN----HVFFAGGGSEANDTNIRMVRTYW 140 (472)
T ss_dssp CCHHHHHHHHHHHHH-CSCCCSSS------SEECHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccccc------ccCCHHHHHHHHHHHHhCCCCCC----EEEEeCCHHHHHHHHHHHHHHHH
Confidence 479999999988765 21111111 11112223366888888876543 499998888 98888877753
Q ss_pred ------CCCeeeecCCCCCcccCccc-----cccccce-eeeeeeeEEEeccc--CCCCCCCC--------HHHHHHHhh
Q 018231 135 ------PHDRIMALDLPHGGHLSHGY-----QTDTKKI-SAVSIFFETMPYRL--NESTGYID--------YDQLEKSAT 192 (359)
Q Consensus 135 ------~Gd~Vl~~~~~~~~~~~~~~-----~~~~~~~-~~~g~~~~~v~~~~--~~~~~~~d--------~e~l~~~i~ 192 (359)
++++|++.++.|.+...-.. ..++... ...+ +..++.+. ...++ .| +++|++.++
T Consensus 141 ~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~--~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~ 217 (472)
T 3hmu_A 141 QNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPD--VHHINQPNWWAEGGD-MDPEEFGLARARELEEAIL 217 (472)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSS--EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCC--cEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHH
Confidence 56889988877665421000 0000000 0112 33343222 10111 34 788888886
Q ss_pred h---hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccC--CCCCCCCCceEEEeCCCCcC
Q 018231 193 L---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSL 260 (359)
Q Consensus 193 ~---~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l 260 (359)
+ .++++|++.|.+ .|.+.+ +++|.++|++||+++|+|++|+ +|..... ....+ -..|++++| |++
T Consensus 218 ~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~-v~pdi~t~s--K~l 294 (472)
T 3hmu_A 218 ELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMG-IRPHIMTIA--KGL 294 (472)
T ss_dssp HHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHT-CCCSEEEEC--GGG
T ss_pred hcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhC-CCCceeeec--hhh
Confidence 3 256777776544 455555 9999999999999999999986 3322100 00000 025888877 998
Q ss_pred CC--CCceEEEEeCCcchhccCCcchhhhHHHhhcccc-CCCCCCCCcHHHHHHHHHHHHHHhccccchhHh
Q 018231 261 RG--PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV-FPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 329 (359)
Q Consensus 261 ~g--p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~ 329 (359)
+| .+-|++++++ ++.+.+.... ..+...+.|..+.+|..++|+.+.++...++.+
T Consensus 295 ~gg~~plG~v~~~~--------------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~ 352 (472)
T 3hmu_A 295 SSGYAPIGGSIVCD--------------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVR 352 (472)
T ss_dssp TTTSSCCEEEEEEH--------------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred hcCCcceEEEEECH--------------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 76 3448888887 5555552111 112223456677778888898876554344444
No 217
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.62 E-value=3.6e-15 Score=143.35 Aligned_cols=232 Identities=12% Similarity=0.152 Sum_probs=139.2
Q ss_pred CceeeCC---C--CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 48 GLELIPS---E--NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~---~--~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.+++.++ . ...+|.+.+++.+.+.... .... .|. .+....+++++++++|.+ .|++++|+
T Consensus 59 ~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~---~~~~-~~~-----~~~~~~l~~~la~~~g~~------~v~~~~gg 123 (420)
T 2pb2_A 59 YIDFAGGIAVTALGHCHPALVEALKSQGETLW---HTSN-VFT-----NEPALRLGRKLIDATFAE------RVLFMNSG 123 (420)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHTTCC---CCCT-TSC-----CHHHHHHHHHHHHHSSCS------EEEEESSH
T ss_pred EEEccccccccccCCCCHHHHHHHHHHHHhcc---cccC-ccC-----CHHHHHHHHHHHhhCCCC------eEEEeCCH
Confidence 4566543 1 2357999999999886521 1111 121 122334668888988843 48899888
Q ss_pred H-HHHHHHHhhcC-------CC-CeeeecCCCCCcccCccccccccc-----eeeeeeeeEEEecccCCCCCCCCHHHHH
Q 018231 123 P-SNFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRLNESTGYIDYDQLE 188 (359)
Q Consensus 123 ~-a~~~~~~al~~-------~G-d~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~v~~~~~~~~~~~d~e~l~ 188 (359)
+ ++..++.++.. +| ++|+++++.|.+............ ..-....+..++ . .|+++|+
T Consensus 124 teA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~--~------~d~~~le 195 (420)
T 2pb2_A 124 TEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVP--F------NDLHAVK 195 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEEC--T------TCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEec--C------CCHHHHH
Confidence 8 88888887764 67 589999877655432111000000 000000122222 2 2899999
Q ss_pred HHhhhhCCcEEEEcC-CCC-CC----hhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCC---CC-CceEEEeCCCC
Q 018231 189 KSATLFRPKLIVAGA-SAY-AR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FE-YADVVTTTTHK 258 (359)
Q Consensus 189 ~~i~~~~~k~v~l~~-~n~-g~----~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~---~~-~~D~v~~s~~K 258 (359)
+.+++ ++++|++++ +|+ |. ..++++|.++|++||+++|+|++|+ |....+. ... +. ..|++++ +|
T Consensus 196 ~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g~~~~g~-~~~~~~~~~~~diit~--sK 270 (420)
T 2pb2_A 196 AVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-GMGRTGD-LFAYMHYGVTPDILTS--AK 270 (420)
T ss_dssp HHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSS-SSHHHHHTCCCSEEEE--CG
T ss_pred HHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-CcccCCc-HHHHHhcCCCCCeEEe--cc
Confidence 99987 899999884 343 43 4679999999999999999999994 4322111 000 01 2688865 59
Q ss_pred cCCCC-CceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 259 SLRGP-RGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 259 ~l~gp-~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
+++++ +.|++++++ ++.+.+.... .+...+.+....+++.++|+.+.++
T Consensus 271 ~l~~G~~iG~~~~~~--------------~l~~~l~~~~-~~~t~~~~~~~~aa~~a~L~~~~~~ 320 (420)
T 2pb2_A 271 ALGGGFPVSAMLTTQ--------------EIASAFHVGS-HGSTYGGNPLACAVAGAAFDIINTP 320 (420)
T ss_dssp GGGTTSCCEEEEECH--------------HHHTTCC-----CCEECCCHHHHHHHHHHHHHHSSH
T ss_pred cccCCCceEEEEEhH--------------HHHHhhcCCC-cCcccCcCHHHHHHHHHHHHHHHhc
Confidence 99743 348998877 4444333210 1111245667777888889887654
No 218
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.61 E-value=1.6e-14 Score=138.87 Aligned_cols=239 Identities=12% Similarity=0.069 Sum_probs=141.3
Q ss_pred cCceeeCCC--CC---CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIPSE--NF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~--~~---~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..+++.++. ++ .+|.|++++.+.+.... .+. + . .+....++++++++++ +++ .|++++|
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~----~-~----~~~~~~la~~l~~~~~-~~~----~v~~~~g 116 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT--SFG----A-P----CALENVLAEMVNDAVP-SIE----MVRFVNS 116 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS--CCS----S-C----CHHHHHHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC--CcC----C-C----CHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 346666543 22 58999999999876521 110 1 1 1223346688889887 443 4999998
Q ss_pred hH-HHHHHHHhh--cCCCCeeeecCCCCCcccCcccccccccee------eee------eeeEEEecccCCCCCCCCHHH
Q 018231 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKIS------AVS------IFFETMPYRLNESTGYIDYDQ 186 (359)
Q Consensus 122 ~~-a~~~~~~al--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~------~~g------~~~~~v~~~~~~~~~~~d~e~ 186 (359)
++ ++..++... ...+++|++.++.|.+.............. ..+ ..+..+ +.+ |+++
T Consensus 117 gsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------d~~~ 188 (427)
T 3fq8_A 117 GTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT--PYN------DLEA 188 (427)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEE--ETT------CHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeec--CCC------CHHH
Confidence 88 888776432 234578888887766543211100000000 000 001111 121 8999
Q ss_pred HHHHhhhh--CCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCC----CCCCCCCceEEEe
Q 018231 187 LEKSATLF--RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTT 254 (359)
Q Consensus 187 l~~~i~~~--~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~v~~ 254 (359)
|++.+++. ++++|++++.+ +|.+.+ +++|.++|++||+++|+|++|+ |. ..+. ...+. ..|++++
T Consensus 189 le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~-~~di~t~ 265 (427)
T 3fq8_A 189 VKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGV-TPDLTTL 265 (427)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTC-CCSEEEE
T ss_pred HHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCC-CCChhhh
Confidence 99999763 56777777444 566666 9999999999999999999996 33 1110 00110 2588777
Q ss_pred CCCCcCCC-CCceEEEEeCCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhccccchhH
Q 018231 255 TTHKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTLITFSHI 328 (359)
Q Consensus 255 s~~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~ 328 (359)
| |+|++ .+.|++++++ ++.+.+.... ......+.+..+.+|..++++.+.++....+.
T Consensus 266 s--K~~~~G~~~G~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~ 326 (427)
T 3fq8_A 266 G--KIIGGGLPVGAYGGKR--------------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYL 326 (427)
T ss_dssp C--GGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHH
T ss_pred h--hhhhCCcceEEEEEcH--------------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 6 99864 3458888876 5555443221 11111244778888888999887664333333
No 219
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.61 E-value=2.2e-14 Score=138.11 Aligned_cols=240 Identities=11% Similarity=0.095 Sum_probs=138.5
Q ss_pred cCceeeCCCC-----CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~~-----~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..+++.++.. ..+|.|++++.+.+.+....+ |+. +... .++++++++++ ..+ .|++++|
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~------~~~-~~~~----~la~~l~~~~~-~~~----~v~~~~s 117 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFG------APT-EMEV----KMAQLVTDLVP-TMD----MVRMVNS 117 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCS------SCC-HHHH----HHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccC------CCC-HHHH----HHHHHHHhhCC-CCC----EEEEeCc
Confidence 3466665442 248999999999887632111 111 2222 35588888886 343 4899988
Q ss_pred hH-HHHHHHHhh--cCCCCeeeecCCCCCcccCccccc-----------cccce-eeeeeeeEEEecccCCCCCCCCHHH
Q 018231 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-----------DTKKI-SAVSIFFETMPYRLNESTGYIDYDQ 186 (359)
Q Consensus 122 ~~-a~~~~~~al--~~~Gd~Vl~~~~~~~~~~~~~~~~-----------~~~~~-~~~g~~~~~v~~~~~~~~~~~d~e~ 186 (359)
++ ++..++... ..++++|++.+..|.+........ ...++ .........+ +. .|+++
T Consensus 118 Gsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~ 189 (429)
T 4e77_A 118 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTC--TY------NDLAS 189 (429)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEE--CT------TCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeec--CC------CCHHH
Confidence 88 888777643 246778888876665543200000 00000 0000001111 11 28999
Q ss_pred HHHHhhhh--CCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCC----CCCCCCCceEEEe
Q 018231 187 LEKSATLF--RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTT 254 (359)
Q Consensus 187 l~~~i~~~--~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~v~~ 254 (359)
|++.+++. ++++|++.|.| .|.+.+ +++|.++|++||+++|+|++|+ |. ..+. ...+. ..|++++
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~-~pdi~t~ 266 (429)
T 4e77_A 190 VRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHV-IPDLTCL 266 (429)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTC-CCSEEEE
T ss_pred HHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCC-CCCeeee
Confidence 99999742 45667666655 455556 9999999999999999999997 32 1110 00110 2588766
Q ss_pred CCCCcCCC-CCceEEEEeCCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhccccchhHh
Q 018231 255 TTHKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTLITFSHIH 329 (359)
Q Consensus 255 s~~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~ 329 (359)
| |++++ .+.|++++++ ++.+.+.... ..+...+.|....++..++|+.+.++....+.+
T Consensus 267 s--K~~~~G~~~G~~~~~~--------------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 328 (429)
T 4e77_A 267 G--KIIGGGMPVGAFGGRR--------------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLT 328 (429)
T ss_dssp E--GGGGTTSCCEEEEECH--------------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHH
T ss_pred c--ccccCCCCeEEEEECH--------------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 6 98864 3448888877 4444443211 111123567888888889999886543333333
No 220
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.61 E-value=2.1e-14 Score=138.27 Aligned_cols=233 Identities=12% Similarity=-0.013 Sum_probs=137.8
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc--C
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--K 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--~ 134 (359)
.+|.|++++.+.+.... +.. ..|.. .....++++++++++++.+ +|++|+|++ ++..++..+. .
T Consensus 60 ~~p~v~~a~~~~~~~~~---~~~-~~~~~-----~~~~~l~~~la~~~~~~~~----~v~~~~gg~ea~~~a~~~~~~~~ 126 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKLD---HLF-SEMLS-----RPVVDLATRLANITPPGLD----RALLLSTGAESNEAAIRMAKLVT 126 (433)
T ss_dssp TCHHHHHHHHHHHHHCC---CCC-TTCCC-----HHHHHHHHHHHHHSCTTCC----EEEEESCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCc---ccc-cccCC-----HHHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHhh
Confidence 48999999999886521 111 11111 2222356788999987654 499999888 8887777543 3
Q ss_pred CCCeeeecCCCCCcccCccc----ccccc--ceeeeeeeeEEEecccCC-CCC--------CCCHHHHHHHhhh---hCC
Q 018231 135 PHDRIMALDLPHGGHLSHGY----QTDTK--KISAVSIFFETMPYRLNE-STG--------YIDYDQLEKSATL---FRP 196 (359)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~----~~~~~--~~~~~g~~~~~v~~~~~~-~~~--------~~d~e~l~~~i~~---~~~ 196 (359)
.+|+|++.++.|.+...... ..+.. .....+ +..++++... ..+ .+|+++|++.+++ .++
T Consensus 127 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 204 (433)
T 1zod_A 127 GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNL 204 (433)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCe
Confidence 46899999877655321000 00000 011123 2334322110 011 2469999999874 366
Q ss_pred cEEEEcCC-C-CCChhh----HHHHHHHHHHcCCEEEEecccc-ccccccCC--CCCCCCCceEEEeCCCCcCCCC-Cce
Q 018231 197 KLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRGP-RGA 266 (359)
Q Consensus 197 k~v~l~~~-n-~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~gp-~gG 266 (359)
++|+++|+ | +|...+ +++|.++|++||+++|+|++|+ +|...... ...+ ...|++++| |+|+++ +.|
T Consensus 205 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~-~~~di~s~s--K~~~~G~~ig 281 (433)
T 1zod_A 205 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDG-VTPDILTLS--KTLGAGLPLA 281 (433)
T ss_dssp EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT-CCCSEEEEC--HHHHTTSSCE
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcC-CCCCEEEec--ccccCCCCee
Confidence 77777654 3 676555 9999999999999999999997 43221100 0000 025777655 998653 339
Q ss_pred EEEEeCCcchhccCCcchhhhHHHhhccccC-CCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 267 MIFFRKGVKEINKQGKEVFYDYEEKINQAVF-PGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 267 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++++++ ++.+.+..... .+...+.|..+.+|..++++.+.++
T Consensus 282 ~~~~~~--------------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~ 324 (433)
T 1zod_A 282 AIVTSA--------------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRD 324 (433)
T ss_dssp EEEECH--------------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred EEEEhH--------------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 999987 45544433211 1112334677777888889877654
No 221
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.58 E-value=2.3e-14 Score=138.07 Aligned_cols=231 Identities=13% Similarity=0.046 Sum_probs=135.7
Q ss_pred cCceeeCCC--C---CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~--~---~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..+++.++. + ..+|.|++++.+.+.+....+ |+ .....+ ++++++++++ ..+ .|++++|
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~------~~-~~~~~~----l~~~la~~~~-~~~----~v~~~~~ 117 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFG------AP-TEIENK----LAKLVIERVP-SIE----IVRMVNS 117 (429)
T ss_dssp EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCS------SC-CHHHHH----HHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcC------CC-CHHHHH----HHHHHHHhCC-CCC----EEEEeCC
Confidence 346666543 2 258999999999887622111 11 122333 5578888886 333 4899988
Q ss_pred hH-HHHHHHHhhc--CCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCC------------CCCHHH
Q 018231 122 SP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG------------YIDYDQ 186 (359)
Q Consensus 122 ~~-a~~~~~~al~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~~d~e~ 186 (359)
++ ++..++..+. .++++|++.++.|.+...... ...+.....+..+.. ... .-|+++
T Consensus 118 Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~-------~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 3k28_A 118 GTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLL-------IKAGSGVATLGLPDS-PGVPEGVAKNTITVAYNDLES 189 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGC-------SSCCTTC-----CCC-TTCCHHHHTTEEEEETTCHHH
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHH-------HhcCCcccccCCCCc-CCCCCcccCceeecCCCCHHH
Confidence 88 8887777664 367889988866654421111 001110100100000 000 018999
Q ss_pred HHHHhhh--hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCCC----CCCCCCceEEEe
Q 018231 187 LEKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTT 254 (359)
Q Consensus 187 l~~~i~~--~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~v~~ 254 (359)
|++.+++ .++++|++.+++ .|.+.+ +++|.++|++||+++|+|++|+ |. ..+.. ..+ -..|++++
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~-~~~di~t~ 266 (429)
T 3k28_A 190 VKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF-RVAYNCGQGYYG-VTPDLTCL 266 (429)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-TSSTTHHHHHHT-CCCSEEEE
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchHHHHhC-CCCceehh
Confidence 9998873 256777776544 455665 9999999999999999999984 32 11100 000 02578776
Q ss_pred CCCCcCCC-CCceEEEEeCCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHh
Q 018231 255 TTHKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVC 320 (359)
Q Consensus 255 s~~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~i~al~~Al~~~~ 320 (359)
| |+|++ .+.|++++++ ++.+.+.... ..+...+.+..+.+|..++++.+.
T Consensus 267 s--K~~~~G~~iG~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~ 319 (429)
T 3k28_A 267 G--KVIGGGLPVGAYGGKA--------------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT 319 (429)
T ss_dssp C--GGGGTTSCCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC
T ss_pred h--hhhcCCCCeEEEEEcH--------------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH
Confidence 6 99854 3449998877 5555443211 112223566777788888887654
No 222
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.58 E-value=5.8e-14 Score=135.34 Aligned_cols=233 Identities=13% Similarity=0.083 Sum_probs=139.3
Q ss_pred CceeeCCC--C---CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 48 GLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~~--~---~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.|++..+. + ..+|.+.+++.+.+.+....+ +. .+ +...++++++++++ ..+ .|++++|+
T Consensus 58 ~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~------~~-~~----~~~~l~~~la~~~~-~~~----~v~~~~sg 121 (434)
T 2epj_A 58 IVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYG------AP-GE----AEVLLAEKILGYVK-RGG----MIRFVNSG 121 (434)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCS------SC-CH----HHHHHHHHHHHHHC-TTC----EEEEESSH
T ss_pred EEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCC------CC-CH----HHHHHHHHHHHhCC-CCC----EEEEeCCH
Confidence 46776553 2 258999999999887621001 11 12 22235678888884 332 48888888
Q ss_pred H-HHHHHHHhh--cCCCCeeeecCCCCCcccCccccccccc------eeeeee------eeEEEecccCCCCCCCCHHHH
Q 018231 123 P-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSI------FFETMPYRLNESTGYIDYDQL 187 (359)
Q Consensus 123 ~-a~~~~~~al--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~------~~~~v~~~~~~~~~~~d~e~l 187 (359)
+ ++.+++.+. +.++|+|+++++.|.+............ ....|. .+..++ . .|+++|
T Consensus 122 seA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~--~------~d~~~l 193 (434)
T 2epj_A 122 TEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTP--Y------NDVEAL 193 (434)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEE--T------TCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecC--C------CCHHHH
Confidence 8 888777761 3456788888877665432111000000 000111 122222 2 289999
Q ss_pred HHHhhh--hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCC---CCCCCCCceEEEeCC
Q 018231 188 EKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV---IPSPFEYADVVTTTT 256 (359)
Q Consensus 188 ~~~i~~--~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~---~~~~~~~~D~v~~s~ 256 (359)
++.+++ .++++|+++|.+ +|.+.+ +++|.++|++||+++|+|++|+ |...... ...+ -..|++++|
T Consensus 194 e~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~-~~~di~s~s- 270 (434)
T 2epj_A 194 ERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGLEGAQGYFN-IEGDIIVLG- 270 (434)
T ss_dssp HHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSSTTHHHHHHT-CCCSEEEEE-
T ss_pred HHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCcchhhHHhC-CCCCeeeec-
Confidence 999874 267788777543 687776 9999999999999999999997 4321100 0000 026887665
Q ss_pred CCcCCC-CCceEEEEeCCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 257 HKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 257 ~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
|+|++ .+.|++++++ ++.+.+.... ..+...+.|....++..++|+.+.++
T Consensus 271 -K~l~~G~~~G~v~~~~--------------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~ 324 (434)
T 2epj_A 271 -KIIGGGFPVGAVAGSR--------------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEE 324 (434)
T ss_dssp -GGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHS
T ss_pred -chhcCCcceeeeeecH--------------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 99865 3569999887 4444443210 11111245677788888889887653
No 223
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.57 E-value=6.7e-14 Score=135.89 Aligned_cols=244 Identities=11% Similarity=-0.011 Sum_probs=136.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc--C
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--K 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--~ 134 (359)
.+|.|++++.+.+.... .+... .+..+....++++++++++.+.. ..|++|+|++ ++..++.... .
T Consensus 81 ~~p~v~~A~~~~~~~~~--~~~~~------~~~~~~~~~la~~l~~~~~~~~~---~~v~~~~sGseA~~~alk~a~~~~ 149 (453)
T 4ffc_A 81 SHPAVAAAIADQATHFT--HTCFM------VTPYEQYVQVAELLNALTPGDHD---KRTALFNSGAEAVENAIKVARLAT 149 (453)
T ss_dssp TCHHHHHHHHHHHHHCS--CCTTT------TSCCHHHHHHHHHHHHHSSCSSC---EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--ccccC------cCCCHHHHHHHHHHHHhCCCCCC---cEEEEeCcHHHHHHHHHHHHHHhc
Confidence 48999999998876521 11111 11122333466889999875422 2599999888 8887776653 3
Q ss_pred CCCeeeecCCCCCcccCcccc------ccccceeeeeeeeEEEecccCC-CCCCCC--------HHHHHHHhhhhCCcEE
Q 018231 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNE-STGYID--------YDQLEKSATLFRPKLI 199 (359)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~-~~~~~d--------~e~l~~~i~~~~~k~v 199 (359)
.+++|++.+..|.+....... .++.........+..++++... +.+..+ ++.|++.+.+.++++|
T Consensus 150 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aav 229 (453)
T 4ffc_A 150 GRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAI 229 (453)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 568899988777654310000 1111111111123334433210 111122 3556666654345566
Q ss_pred EEcCCC-C-CChhh----HHHHHHHHHHcCCEEEEecccc-ccccccCC--CCCCCCCceEEEeCCCCcCCC-CCceEEE
Q 018231 200 VAGASA-Y-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRG-PRGAMIF 269 (359)
Q Consensus 200 ~l~~~n-~-g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~g-p~gG~l~ 269 (359)
++.|.| + |...+ +++|.++|++||+++|+|++|+ +|...... ...+ -..|++++| |++++ .+.|+++
T Consensus 230 i~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~-~~pdi~t~s--K~~~~G~~~G~~~ 306 (453)
T 4ffc_A 230 IIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEG-IVPDIVTMA--KGIAGGMPLSAVT 306 (453)
T ss_dssp EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT-CCCSEEEEC--GGGGTTSSCEEEE
T ss_pred EEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcC-CCcchHhhh--hhhcCCcCeEEEE
Confidence 666655 4 44443 9999999999999999999985 22211000 0000 025788776 98854 3338888
Q ss_pred EeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhh
Q 018231 270 FRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 330 (359)
Q Consensus 270 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~ 330 (359)
+++ ++.+.+..... +...+.|....+|..++|+.+.++....+.++
T Consensus 307 ~~~--------------~i~~~~~~~~~-~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 352 (453)
T 4ffc_A 307 GRA--------------ELMDAVYAGGL-GGTYGGNPVTCAAAVAALGVMRELDLPARARA 352 (453)
T ss_dssp EEH--------------HHHTTSCTTSS-CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred ECH--------------HHHhhhcccCc-CCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 877 55554433221 12234456677777788887765433344443
No 224
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.57 E-value=4.6e-14 Score=136.84 Aligned_cols=230 Identities=12% Similarity=0.095 Sum_probs=133.3
Q ss_pred CceeeCCC--C---CCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 48 GLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~~--~---~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.|++..+. + ..++.+.+++.+.+.... .+ + +..++++.++++++++++ +.+ .|++++|+
T Consensus 59 ~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~------~---~~~~~~~~la~~l~~~~~-~~~----~v~~~~gg 122 (453)
T 2cy8_A 59 YLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY------A---ASHPLEVRWAERIVAAFP-SIR----KLRFTGSG 122 (453)
T ss_dssp EEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS------C---SSCHHHHHHHHHHHHHCT-TCS----EEEEESCH
T ss_pred EEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC------C---CCCHHHHHHHHHHHhhCC-CCC----EEEEeCCH
Confidence 46776553 1 368999999999876521 11 1 123455557788888886 443 48899888
Q ss_pred H-HHHHHHHh---hcCCCCeeeecCCCCCcccCcccccccc---ceeeeeeee----EEEecccCCCCCCCCHHHHHHHh
Q 018231 123 P-SNFQVYTA---LLKPHDRIMALDLPHGGHLSHGYQTDTK---KISAVSIFF----ETMPYRLNESTGYIDYDQLEKSA 191 (359)
Q Consensus 123 ~-a~~~~~~a---l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~---~~~~~g~~~----~~v~~~~~~~~~~~d~e~l~~~i 191 (359)
+ ++..++.+ +.+ +|+|+++++.|++........... .....|... ..+.++. .|+++|++.+
T Consensus 123 ~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~d~~~le~~l 195 (453)
T 2cy8_A 123 TETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP------DDIEGMREVF 195 (453)
T ss_dssp HHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT------TCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC------CCHHHHHHHH
Confidence 8 88877776 554 467888886665442211100000 000012110 0111111 3899999998
Q ss_pred hh--hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCCCCCC---CC-CceEEEeCCCCc
Q 018231 192 TL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FE-YADVVTTTTHKS 259 (359)
Q Consensus 192 ~~--~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~---~~-~~D~v~~s~~K~ 259 (359)
++ .++++|+++|.+ +|.+.+ +++|.++|++||+++|+|++|+ |. ..+. ... +. ..|++++| |+
T Consensus 196 ~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~-~~~~~~~~~~~di~s~s--K~ 270 (453)
T 2cy8_A 196 ANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGN-HGMQALLDVQPDLTCLA--KA 270 (453)
T ss_dssp HHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCT-THHHHHHTCCCSEEEEE--GG
T ss_pred HhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCc-hhhhHHhCCCCcEEEEC--hh
Confidence 74 267788777553 676666 9999999999999999999996 44 2111 000 01 25877655 99
Q ss_pred CCC-CCceEEEEeCCcchhccCCcchhhhHHHhhccc----cCCCCCCCCcHHHHHHHHHHHHH-H
Q 018231 260 LRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQA----VFPGLQGGPHNHTITGLAVALKQ-V 319 (359)
Q Consensus 260 l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~gt~~~~~i~al~~Al~~-~ 319 (359)
|++ .+.|++++++ ++.+.+... ...+...+.|..+.++..++|+. +
T Consensus 271 l~~G~~~G~v~~~~--------------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~ 322 (453)
T 2cy8_A 271 SAGGLPGGILGGRE--------------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL 322 (453)
T ss_dssp GGTTSSCEEEEECH--------------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH
T ss_pred hhCCcceEEEechH--------------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh
Confidence 974 4569999987 444443320 00111134567777888888987 6
No 225
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.55 E-value=1.6e-13 Score=131.92 Aligned_cols=230 Identities=13% Similarity=0.068 Sum_probs=137.6
Q ss_pred CceeeCCC-----CCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCCh
Q 018231 48 GLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (359)
Q Consensus 48 ~i~l~~~~-----~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~ 122 (359)
.|++.++. ...+|.+++++.+.+.+.. .+ +. ..+++..++++++++++ ..+ .|++++|+
T Consensus 54 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~------~~---~~~~~~~l~~~l~~~~~-~~~----~v~~~~~g 117 (424)
T 2e7u_A 54 YLDYVMSWGPLILGHAHPKVLARVRETLERGL--TF------GA---PSPLEVALAKKVKRAYP-FVD----LVRFVNSG 117 (424)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC------SS---CCHHHHHHHHHHHHHCT-TCC----EEEEESSH
T ss_pred EEEccccccccccCCCCHHHHHHHHHHHHhCC--CC------CC---CCHHHHHHHHHHHHhCC-CCC----EEEEeCCH
Confidence 46776553 2358999999999887521 11 11 11223336688888885 333 48888888
Q ss_pred H-HHHHHHHh--hcCCCCeeeecCCCCCcccCccccccccc------eeeeee------eeEEEecccCCCCCCCCHHHH
Q 018231 123 P-SNFQVYTA--LLKPHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSI------FFETMPYRLNESTGYIDYDQL 187 (359)
Q Consensus 123 ~-a~~~~~~a--l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~------~~~~v~~~~~~~~~~~d~e~l 187 (359)
+ ++..++.. .+.++|.|+++++.|++............ ....|. .+..+ +. .|+++|
T Consensus 118 ~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~--~~------~d~~~l 189 (424)
T 2e7u_A 118 TEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVL--EY------NDPEGL 189 (424)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEE--CT------TCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeC--CC------CCHHHH
Confidence 8 88877775 23445888888877765432111000000 000111 12122 22 389999
Q ss_pred HHHhhh--hCCcEEEEcCCC--CCChhh----HHHHHHHHHHcCCEEEEeccccccccccCCC----CCCCCCceEEEeC
Q 018231 188 EKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTT 255 (359)
Q Consensus 188 ~~~i~~--~~~k~v~l~~~n--~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~v~~s 255 (359)
++.+++ .++++|+++|.+ +|.+.+ +++|.++ ++||+++|+|++|+ |.. .+.. ..+ -..|++++
T Consensus 190 e~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~-~g~~~~~~~~~-~~~di~s~- 264 (424)
T 2e7u_A 190 REVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFR-LAFGGATELLG-LKPDLVTL- 264 (424)
T ss_dssp HHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTT-SSTTHHHHHHT-CCCSEEEE-
T ss_pred HHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccc-cchhHHHHHhC-CCcchhhh-
Confidence 998873 256777776554 676666 9999999 99999999999997 442 1110 000 02587755
Q ss_pred CCCcCCC-CCceEEEEeCCcchhccCCcchhhhHHHhhcccc--CCCCCCCCcHHHHHHHHHHHHHHhc
Q 018231 256 THKSLRG-PRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAV--FPGLQGGPHNHTITGLAVALKQVCT 321 (359)
Q Consensus 256 ~~K~l~g-p~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~gt~~~~~i~al~~Al~~~~~ 321 (359)
+|+|++ .+.|++++++ ++.+.+.... ..+...+.|..+.+|..++|+.+.+
T Consensus 265 -sK~l~~G~~~G~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 318 (424)
T 2e7u_A 265 -GKILGGGLPAAAYAGRR--------------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE 318 (424)
T ss_dssp -CGGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH
T ss_pred -hhhhhCCcceEEEEEcH--------------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 599964 3459999887 4555443311 1111224566777888888988765
No 226
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.55 E-value=1.3e-13 Score=133.81 Aligned_cols=244 Identities=9% Similarity=-0.007 Sum_probs=135.0
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhcC--
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~~-- 134 (359)
.+|.|++++.+.+.... .+... .+..+.+..++++++++++.+.. ..|++|+|++ ++..++.....
T Consensus 78 ~~p~v~~A~~~~~~~~~--~~~~~------~~~~~~~~~la~~l~~~~~~~~~---~~v~~~~sGseA~~~Alk~a~~~~ 146 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDFT--HTCFM------VTPYEGYVAVCEQLNRLTPVRGD---KRSALFNSGSEAVENAVKIARSHT 146 (451)
T ss_dssp TCHHHHHHHHHHHTTCS--CCTTT------TSCCHHHHHHHHHHHHHSSCCSS---EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--cccCC------ccCCHHHHHHHHHHHHhCCcCCC---CEEEEeCcHHHHHHHHHHHHHHhc
Confidence 47999999998876521 11111 11112233466888888875422 2588988888 88887766543
Q ss_pred CCCeeeecCCCCCcccCccc------cccccceeeeeeeeEEEecccC-------CCCC---CCCHHHHHHHhh----hh
Q 018231 135 PHDRIMALDLPHGGHLSHGY------QTDTKKISAVSIFFETMPYRLN-------ESTG---YIDYDQLEKSAT----LF 194 (359)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~v~~~~~-------~~~~---~~d~e~l~~~i~----~~ 194 (359)
.+++|++.+..|.+...... ..++.........+..++++.. .+.. ..+++.+++.+. ..
T Consensus 147 g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~ 226 (451)
T 3oks_A 147 HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGAD 226 (451)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGG
T ss_pred CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCC
Confidence 55889988877765431100 0111111111112334443310 0000 113444445443 23
Q ss_pred CCcEEEEcCCC-C-CChhh----HHHHHHHHHHcCCEEEEecccc-cccccc--CCCCCCCCCceEEEeCCCCcCCC-CC
Q 018231 195 RPKLIVAGASA-Y-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRG-PR 264 (359)
Q Consensus 195 ~~k~v~l~~~n-~-g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~~s~~K~l~g-p~ 264 (359)
++++|++.|.+ + |...+ +++|.++|++||+++|+|++|+ +|.... .....+. ..|++++| |++++ .+
T Consensus 227 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~s--K~l~~G~~ 303 (451)
T 3oks_A 227 NLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVTA--KGIAGGLP 303 (451)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSS
T ss_pred CEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeeeh--hhhhCCcc
Confidence 45666666555 4 44444 9999999999999999999986 222110 0001110 25888766 99854 33
Q ss_pred ceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhh
Q 018231 265 GAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHV 330 (359)
Q Consensus 265 gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~ 330 (359)
.|++++++ ++.+.+..... +...+.|....+|..++|+.+.++....+.++
T Consensus 304 iG~v~~~~--------------~~~~~~~~~~~-~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 354 (451)
T 3oks_A 304 LSAVTGRA--------------EIMDSPHVSGL-GGTYGGNPIACAAALATIETIESEGLVARAQQ 354 (451)
T ss_dssp CEEEEEEH--------------HHHTCSCTTSB-CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred eEEEEECH--------------HHHhhhcCCCc-CCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 38888877 55554433211 12234566777777788988765433334333
No 227
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.55 E-value=5.8e-14 Score=134.72 Aligned_cols=223 Identities=10% Similarity=0.015 Sum_probs=135.1
Q ss_pred ChHHHHHHHHHHHHhhcCceeeCC-------CCCCcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHH
Q 018231 31 DPEIADIIEHEKARQWKGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (359)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~l~~~-------~~~~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~ 103 (359)
+..++.+..+..+.....|||..| ..++.+.|++|....+......+|. ...+..++++++.+++
T Consensus 29 ~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~------p~~G~p~lr~aia~~~-- 100 (420)
T 4h51_A 29 PDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYL------PISGYQPFIDEAVKII-- 100 (420)
T ss_dssp CCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCC------CTTCCHHHHHHHHHHH--
T ss_pred CChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCC------CcCChHHHHHHHHHHh--
Confidence 334666666554443456899765 2355689999987776654433343 3366777776665554
Q ss_pred HcCCC--CCCCceeEEECCChH-HHHHH----HHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccC
Q 018231 104 AFRLD--PEKWGVNVQSLSGSP-SNFQV----YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (359)
Q Consensus 104 ~~g~~--~~~~~~~v~~tsG~~-a~~~~----~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (359)
+|-. ... ...+.|.|++ +...+ ..++++|||+|++++|.++.+ ...+...|.+.+..+...+
T Consensus 101 -~g~~~~~~~--~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y--------~~i~~~aG~~~V~~~~~~~ 169 (420)
T 4h51_A 101 -YGNTVELEN--LVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNH--------YGVVKAAGWKNICTYAYYD 169 (420)
T ss_dssp -HC---CGGG--EEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHH--------HHHHHHTTCCCEEEEECEE
T ss_pred -cCCCccccc--cceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhH--------HHHHHHcCCeEEEeecccc
Confidence 3332 111 2344466666 44323 334568999999999555444 3344556655322222234
Q ss_pred CCCCCCCHHHHHHHhhh--hCCcEEEEc-CCC-CC---ChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCC---
Q 018231 177 ESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--- 246 (359)
Q Consensus 177 ~~~~~~d~e~l~~~i~~--~~~k~v~l~-~~n-~g---~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~--- 246 (359)
++++.+|++.+.+.+.. .++++++++ ++| || ....+++|+++|+++++++++|+++. +....+.....+
T Consensus 170 ~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~-~~~~~~~~~~~~~~~ 248 (420)
T 4h51_A 170 PKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQ-GYASGSLDTDAYAAR 248 (420)
T ss_dssp GGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TTTTSCHHHHTHHHH
T ss_pred ccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhh-hhccCCcccchHHHH
Confidence 35678899998887753 145666666 888 88 44568899999999999999999963 322211100000
Q ss_pred -----CCceEEEeCCCCcCC--CCCceEEEEeCC
Q 018231 247 -----EYADVVTTTTHKSLR--GPRGAMIFFRKG 273 (359)
Q Consensus 247 -----~~~D~v~~s~~K~l~--gp~gG~l~~~~~ 273 (359)
..--+++.|++|+|+ |.+-|++++..+
T Consensus 249 ~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~ 282 (420)
T 4h51_A 249 LFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLK 282 (420)
T ss_dssp HHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECS
T ss_pred hHHhhCceEEEEeccccccccccCceEEEEeccc
Confidence 012378889999774 444599888764
No 228
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.53 E-value=8.8e-14 Score=134.87 Aligned_cols=230 Identities=8% Similarity=-0.002 Sum_probs=131.7
Q ss_pred CcHHHH-H-HHHh---hhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeEEECCChH-HHHHHHH
Q 018231 58 TSVSVM-Q-AVGS---VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP-SNFQVYT 130 (359)
Q Consensus 58 ~~~~v~-~-al~~---~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g-~~~~~~~~~v~~tsG~~-a~~~~~~ 130 (359)
.+|.|+ + ++.+ .+.... .+. . .|.. +... .++++++++++ .+.+ .|++++|++ ++..++.
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~--~~~-~-~~~~-~~~~----~la~~la~~~~~~~~~----~v~~~~~gseA~~~aik 137 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNK--PSN-S-DVYS-VAMA----RFVETFARVLGDPALP----HLFFVEGGALAVENALK 137 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCC--CCT-T-TCCC-HHHH----HHHHHHHHHHCCTTCC----EEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcC--CCC-c-ccCC-HHHH----HHHHHHHHhcCCCCCC----EEEEeCchHHHHHHHHH
Confidence 479999 8 9988 655421 111 1 1111 2222 35577888887 3333 499999888 8887776
Q ss_pred hhc---C-----------CCCeeeecCCCCCcccCccccccc------cceeeeeeeeEEEecccCCC-CC--------C
Q 018231 131 ALL---K-----------PHDRIMALDLPHGGHLSHGYQTDT------KKISAVSIFFETMPYRLNES-TG--------Y 181 (359)
Q Consensus 131 al~---~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~v~~~~~~~-~~--------~ 181 (359)
.+. . +||+|+++++.|++.......... ....-....+..+ +.+.. .. .
T Consensus 138 ~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~ 215 (449)
T 2cjg_A 138 AAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDA--PYMRPGLDEPAMAALEA 215 (449)
T ss_dssp HHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECC--CCCCTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEE--cCCCchhhccccchhhH
Confidence 432 2 289999999877765432211110 0110001122223 23310 11 2
Q ss_pred CCHHHHHHHhhh--hCCcEEEEcCC-C-CCChhh----HHHHHHHHHHcCCEEEEecccc-cccccc--CCCCCCCCCce
Q 018231 182 IDYDQLEKSATL--FRPKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYAD 250 (359)
Q Consensus 182 ~d~e~l~~~i~~--~~~k~v~l~~~-n-~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D 250 (359)
.|+++|++.+++ .++++|++++. | +|...+ +++|.++|++||+++|+|++|+ +|.... .....+ -..|
T Consensus 216 ~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~-~~~d 294 (449)
T 2cjg_A 216 EALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD-VAPD 294 (449)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT-CCCS
T ss_pred HHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC-CCce
Confidence 456778888862 26788887754 4 675555 9999999999999999999997 332211 000000 0268
Q ss_pred EEEeCCCCcCCCCCceEEEEeCCcchhccCCcchhhhHHHhhcc----ccCCCCCCCCcHHHHHHHHHHHHHHhcc
Q 018231 251 VVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQ----AVFPGLQGGPHNHTITGLAVALKQVCTL 322 (359)
Q Consensus 251 ~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~gt~~~~~i~al~~Al~~~~~~ 322 (359)
++++| |+| | -|+++++++ +.+.+.. ....+...+.|..+.+|..+||+.+.++
T Consensus 295 i~t~s--K~l--~-iG~~~~~~~--------------~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~ 351 (449)
T 2cjg_A 295 IVAFG--KKT--Q-VCGVMAGRR--------------VDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAE 351 (449)
T ss_dssp EEEEC--GGG--S-SEEEEECGG--------------GGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEec--Ccc--c-EEEEEECHH--------------HhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhc
Confidence 88766 998 4 577778773 3332111 0011112345677788888999887654
No 229
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.48 E-value=2.7e-14 Score=135.98 Aligned_cols=222 Identities=12% Similarity=0.007 Sum_probs=128.0
Q ss_pred cCceeeCCCCCC--cHHHHHHHHhhhhccCCCCCCCCcccCCchhH-----HHHHHHHHHHHHHHcCC--CCCCCceeEE
Q 018231 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI-----DMAESLCQKRALEAFRL--DPEKWGVNVQ 117 (359)
Q Consensus 47 ~~i~l~~~~~~~--~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~-----~~l~~~~~~~~a~~~g~--~~~~~~~~v~ 117 (359)
+.|+|..+++.. ++.+.+++.+..... .......|+...+. .++++++.+++. ..|. ++++ +|+
T Consensus 23 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~---~i~ 95 (391)
T 3bwn_A 23 FVVNLDHGDPTAYEEYWRKMGDRCTVTIR---GCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDR---YIV 95 (391)
T ss_dssp SCEECSSCCCGGGHHHHHHTGGGSCEEEC---TTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSS---EEE
T ss_pred CeeEcCCCCCCCCCCHHHHHhHHHHhhcC---ccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCC---eEE
Confidence 468887776542 334444443222110 01111224444444 777766666665 3454 3322 599
Q ss_pred ECCChH-HHHHHHHhhcCCCC----eeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhh
Q 018231 118 SLSGSP-SNFQVYTALLKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (359)
Q Consensus 118 ~tsG~~-a~~~~~~al~~~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (359)
+|+|++ ++..++.+++++|| +|+++++.|+++. ..+...|.++..++ .+.++. + .
T Consensus 96 ~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~--------~~~~~~g~~~~~~~--~d~~~l--~--------~ 155 (391)
T 3bwn_A 96 VGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYV--------EETTYVRSGMYKWE--GDAWGF--D--------K 155 (391)
T ss_dssp EEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHH--------HHHHTTCBTTEEEE--EESTTC--C--------C
T ss_pred EeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHH--------HHHHHcCCeEEEec--CCHHHc--C--------C
Confidence 999999 88878999999999 9999996665442 23445566665554 332221 1 1
Q ss_pred hhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcC--CEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCC--CCCce
Q 018231 193 LFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGA 266 (359)
Q Consensus 193 ~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~--~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~--gp~gG 266 (359)
+ ++|+|+++ |+| ||.+.+ +|++ ++++ +++|+|++|+.+... .+.. ..+.++++.|++|.++ |.+-|
T Consensus 156 ~-~~k~v~l~~p~NPtG~~~~--~l~~--~~~~~~~~ii~De~y~~~~~~-~l~~--~~~~~i~~~S~SK~~g~~GlRiG 227 (391)
T 3bwn_A 156 K-GPYIELVTSPNNPDGTIRE--TVVN--RPDDDEAKVIHDFAYYWPHYT-PITR--RQDHDIMLFTFSKITGHAGSRIG 227 (391)
T ss_dssp C-SCEEEEEESSCTTTCCCCC--CCC-------CCCEEEEECTTCSTTTS-CCCC--CBCCSEEEEEHHHHHSCGGGCEE
T ss_pred C-CCEEEEECCCCCCCchhHH--HHHH--HhhcCCCEEEEeCCCCCCCCC-cccc--CCCCeEEEEechhhcCCCccceE
Confidence 3 78999887 888 897765 4433 2255 999999999742211 1110 1146899999999774 33339
Q ss_pred EEEE-eCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHH
Q 018231 267 MIFF-RKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318 (359)
Q Consensus 267 ~l~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~ 318 (359)
++++ ++ ++.+.+..... ....+++.+...++..+|+.
T Consensus 228 ~~~~~~~--------------~l~~~l~~~~~-~~~~~~~~~~q~a~~~~l~~ 265 (391)
T 3bwn_A 228 WALVKDK--------------EVAKKMVEYII-VNSIGVSKESQVRTAKILNV 265 (391)
T ss_dssp EEEECCH--------------HHHHHHHHHHH-HHHSSCCHHHHHHHHHHHHH
T ss_pred EEEecCH--------------HHHHHHHHHhc-ccccCCCHHHHHHHHHHHhC
Confidence 9998 44 44443332211 01134566666667777765
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.41 E-value=5.8e-12 Score=121.59 Aligned_cols=231 Identities=14% Similarity=0.063 Sum_probs=134.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhh--cC
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al--~~ 134 (359)
-.|+|.+|+.+.+......+ .......+ +.+.+++.+... + .|.|+++++ |++.++... ..
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~-------~~~~~~~~----lae~l~~~~p~~-~----~v~f~~SGsEA~e~AiklAr~~t 167 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLT-------GHNLLEGR----LARLICERFPQI-E----QLRFTNSGTEANLMALTAALHFT 167 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCC-------SEESSHHH----HHHHHHHHSTTC-S----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCcc-------CCcHHHHH----HHHHHHHhCCCC-C----EEEEeCchHHHHHHHHHHHHhcc
Confidence 36999999998887632111 11122233 446777777532 1 377776666 888777654 23
Q ss_pred CCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhhh--CCcEEEEc--CCCCCChh
Q 018231 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG--ASAYARLY 210 (359)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~~k~v~l~--~~n~g~~~ 210 (359)
..++|+.....|.+.....-. .... .........++.+ |++.+++.+.+. ++.+|++. ..+.|.+.
T Consensus 168 gr~~ii~~~~~yHG~t~~~~~--~~~~--~~~~~~~~~~p~n------d~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~ 237 (454)
T 4ao9_A 168 GRRKIVVFSGGYHGGVLGFGA--RPSP--TTVPFDFLVLPYN------DAQTARAQIERHGPEIAVVLVEPMQGASGCIP 237 (454)
T ss_dssp TCCEEEEETTCBCSTTCBBSS--SBCT--TSCCSEEEEECTT------CHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred cCCeEEEEeCCcCCccccccc--cccC--ccCCCCcccCCCc------hHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence 457788877665553211100 0000 0111122222333 889999888752 45667775 34456544
Q ss_pred h----HHHHHHHHHHcCCEEEEeccccccccccCC--CCCCCCCceEEEeCCCCcCCCCC-ceEEEEeCCcchhccCCcc
Q 018231 211 D----YERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFEYADVVTTTTHKSLRGPR-GAMIFFRKGVKEINKQGKE 283 (359)
Q Consensus 211 ~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~--~~~~~~~~D~v~~s~~K~l~gp~-gG~l~~~~~~~~~~~~g~~ 283 (359)
| +++|.++|++||+++|+|++|+ |...... ...+. ..|+++++ |.++|.. .|++.+++
T Consensus 238 p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv-~PDi~t~g--K~lggG~Piga~~~~~----------- 302 (454)
T 4ao9_A 238 GQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGI-RSDLTTLG--KYIGGGMSFGAFGGRA----------- 302 (454)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEECH-----------
T ss_pred CchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCC-CCcEEEec--cccCCCCcceeeeeHH-----------
Confidence 4 9999999999999999999996 5332110 00000 15999888 9886543 38888887
Q ss_pred hhhhHHHhhccccCCCCC-C--CCcHHHHHHHHHHHHHHhccccchhHhhhc
Q 018231 284 VFYDYEEKINQAVFPGLQ-G--GPHNHTITGLAVALKQVCTLITFSHIHVFS 332 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~-g--t~~~~~i~al~~Al~~~~~~~~~~~~~~~~ 332 (359)
++.+.+.....+... + +.|..+.+|..++|+.+.++...++.++..
T Consensus 303 ---ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g 351 (454)
T 4ao9_A 303 ---DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERG 351 (454)
T ss_dssp ---HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred ---HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHH
Confidence 445544332111111 2 235667777778899988776556555543
No 231
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.40 E-value=5.5e-14 Score=135.49 Aligned_cols=190 Identities=9% Similarity=-0.093 Sum_probs=121.3
Q ss_pred cCceeeCCCCCC--cHHHHHHHHhhhhccCCCCCCCCcccCCch-h---HHHHHHHHHHHHHHHcC--CCCCCCceeEEE
Q 018231 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNE-Y---IDMAESLCQKRALEAFR--LDPEKWGVNVQS 118 (359)
Q Consensus 47 ~~i~l~~~~~~~--~~~v~~al~~~~~~~~~~g~~~~~~~~~~~-~---~~~l~~~~~~~~a~~~g--~~~~~~~~~v~~ 118 (359)
..|+|..+++.. ++.+++++.+.+....... ..|+... + ..++++++++++.+..+ ++++ +|++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~----~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~----~iv~ 128 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHR----MSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR----YIVF 128 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTT----CSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC----EEEE
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCccc----ccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC----EEEE
Confidence 357888777743 4566777776653211011 0122223 3 57777777777776554 3443 5999
Q ss_pred CCChH-HHHHHHHhh--------cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHH
Q 018231 119 LSGSP-SNFQVYTAL--------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 189 (359)
Q Consensus 119 tsG~~-a~~~~~~al--------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~ 189 (359)
|+|++ ++..++.++ ++|||+|+++++.|+++ ...+...|.++. . +.+|+++|++
T Consensus 129 t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~--------~~~~~~~g~~~~--~-------~~~d~~~l~~ 191 (427)
T 2hox_A 129 GVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVF--------REQTKYFDKKGY--V-------WAGNAANYVN 191 (427)
T ss_dssp ESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHH--------HHHHHHSCBTTE--E-------EEEEGGGGTT
T ss_pred eCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccH--------HHHHHHcCCeee--e-------ecCCHHHHHH
Confidence 99999 888899999 99999999999655433 323344454432 1 2346788888
Q ss_pred HhhhhCCcEEEEc-CCC-CCChhhHHHHHHHHHHcCCEEEEeccccccccccCCCCCCCCCceEEEeCCCCcCC--CCCc
Q 018231 190 SATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRG 265 (359)
Q Consensus 190 ~i~~~~~k~v~l~-~~n-~g~~~~l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~--gp~g 265 (359)
.+++ ++|+|+++ |+| +|.+.+ + +++ ++..+.|+++.....+. .... .+.+++++|++|.++ |.+.
T Consensus 192 ~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~--~~~~-~~~~i~~~S~SK~~g~~G~Ri 260 (427)
T 2hox_A 192 VSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTP--IKYK-ADEDILLFTMSKFTGHSGSRF 260 (427)
T ss_dssp CSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSC--CCSC-BCCSEEEEEHHHHTSCGGGCC
T ss_pred hhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCc--cccC-CCceEEEEeChhcCCCCCceE
Confidence 7776 78998887 888 898877 4 233 56788888764211111 1111 237899999999774 3334
Q ss_pred eEEEEeC
Q 018231 266 AMIFFRK 272 (359)
Q Consensus 266 G~l~~~~ 272 (359)
|++++++
T Consensus 261 G~~~~~~ 267 (427)
T 2hox_A 261 GWALIKD 267 (427)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999964
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.10 E-value=2.8e-14 Score=138.58 Aligned_cols=241 Identities=13% Similarity=0.050 Sum_probs=137.5
Q ss_pred cCceeeCCCCC-----CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCC
Q 018231 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (359)
Q Consensus 47 ~~i~l~~~~~~-----~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG 121 (359)
..|++..+..+ .+|.|++|+.+.+......++ .. +... .+.++++++++ ..+ .++++++
T Consensus 101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~------~~-~~~~----~Lae~L~~~~p-~~~----~v~~~nS 164 (465)
T 2yky_A 101 AYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST------QT-ENEA----LFAEAVCDRFP-SID----LVRFTNS 164 (465)
Confidence 45777766542 378999998887665221111 11 1122 25577888874 222 2667665
Q ss_pred hH-HHHHHHHhh--cCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh--hCC
Q 018231 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRP 196 (359)
Q Consensus 122 ~~-a~~~~~~al--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~~ 196 (359)
++ |+..++... ...+|+|++++..|.+...... . +....|.....+.++. .|+++|++.+++ .++
T Consensus 165 GseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~---s-g~~~~g~~~~~~~~~~------~d~~~l~~~l~~~~~~~ 234 (465)
T 2yky_A 165 GTEANLMALATATAITGRKTVLAFDGGYHGGLLNFA---S-GHAPTNAPYHVVLGVY------NDVEGTADLLKRHGHDC 234 (465)
Confidence 55 888777654 3456999998866655422111 0 0001121011122222 278999998873 278
Q ss_pred cEEEEcC--CCCCChhh----HHHHHHHHHHcCCEEEEeccccccccccCCCCCC-CC-CceEEEeCCCCcCCCC-CceE
Q 018231 197 KLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-FE-YADVVTTTTHKSLRGP-RGAM 267 (359)
Q Consensus 197 k~v~l~~--~n~g~~~~----l~~i~~la~~~~~~vivD~a~~~g~~~~~~~~~~-~~-~~D~v~~s~~K~l~gp-~gG~ 267 (359)
++|++.+ +|+|...+ +++|.++|++||+++|+|++|+ +... ...... +. ..|+++ .+|+++++ +.|+
T Consensus 235 aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~~~a~~~~gv~pDi~t--~sK~lg~G~piG~ 310 (465)
T 2yky_A 235 AAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-GGGAQEMLGISADLTT--LGKYIGGGMSFGA 310 (465)
Confidence 8888873 34776555 8999999999999999999998 4221 110000 01 257765 45999652 3388
Q ss_pred EEEeCCcchhccCCcchhhhHHHhhccc--c--CCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhh
Q 018231 268 IFFRKGVKEINKQGKEVFYDYEEKINQA--V--FPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 331 (359)
Q Consensus 268 l~~~~~~~~~~~~g~~~~~~~~~~~~~~--~--~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~ 331 (359)
++++++ +.+.+... . ......+.|....+|..++|+.+.++...++.++.
T Consensus 311 v~~~~~--------------i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~ 364 (465)
T 2yky_A 311 FGGRRD--------------LMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSAS 364 (465)
Confidence 888873 33333320 0 11111234556667777889888765433444433
No 233
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.32 E-value=1.3e-11 Score=120.42 Aligned_cols=233 Identities=12% Similarity=0.085 Sum_probs=127.8
Q ss_pred CcHHHHHHHHhhhhcc-CCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc--
Q 018231 58 TSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-- 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~-- 133 (359)
.+|.|++|+.+.+... +..+ + .++. ....++++.+.++++++++...+ .|++++|++ |+..++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~-~---~~~~-~~~~~l~~~la~~l~~~~~~~~~----~v~f~~sGseA~~~Aik~a~~~ 150 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINR-P---ALGI-LPPENFVEKLRESLLSVAPKGMS----QLITMACGSCSNENAFKTIFMW 150 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCC-C---CTTT-SCBTTHHHHHHHTGGGGCCTTCC----EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccccc-c---cccc-ccHHHHHHHHHHHHHHhCCCCcC----EEEEeCCchhHHHHHHHHHHHH
Confidence 4899999998865321 1011 0 1111 11234444455666666654443 488888888 9888876653
Q ss_pred -----------------------CCC---CeeeecCCCCCcccCccccccc------cceeeeeeeeEEEecccC--C--
Q 018231 134 -----------------------KPH---DRIMALDLPHGGHLSHGYQTDT------KKISAVSIFFETMPYRLN--E-- 177 (359)
Q Consensus 134 -----------------------~~G---d~Vl~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~v~~~~~--~-- 177 (359)
.|| ++|++++..|.+........-. .+....+ +..++++.. +
T Consensus 151 ~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~p~~~~~~~ 228 (472)
T 1ohv_A 151 YRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFD--WPIAPFPRLKYPLE 228 (472)
T ss_dssp HHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCC--CCEECCCCCCSSGG
T ss_pred hhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCC--CcccCCCcccCccc
Confidence 146 8999998776654321110000 0000000 011222110 0
Q ss_pred CC--C-----CCCHHHHHHHhhhh-----CCcEEEEcC--CCCCChhh----HHHHHHHHHHcCCEEEEecccc-ccccc
Q 018231 178 ST--G-----YIDYDQLEKSATLF-----RPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVA 238 (359)
Q Consensus 178 ~~--~-----~~d~e~l~~~i~~~-----~~k~v~l~~--~n~g~~~~----l~~i~~la~~~~~~vivD~a~~-~g~~~ 238 (359)
.. + ..|+++|++.+++. ++++|++.+ +++|.+.+ +++|.++|++||+++|+|++|+ +|...
T Consensus 229 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g 308 (472)
T 1ohv_A 229 EFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTG 308 (472)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred cccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCC
Confidence 00 0 12688999988752 678888863 33786666 9999999999999999999997 33321
Q ss_pred c--CCCCCCCC-CceEEEeCCCCcCCCCCceEEEEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHH
Q 018231 239 A--GVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVA 315 (359)
Q Consensus 239 ~--~~~~~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~A 315 (359)
. .....+.. ..|++++| |++.| ||+++ ++ ++. .+... ......+.|....+|..++
T Consensus 309 ~~~~~~~~gv~~~~Di~t~s--K~~l~--GG~~~-~~--------------~~~-~~~~~-~~~~T~~~~~~~~aaa~aa 367 (472)
T 1ohv_A 309 KFWAHEHWGLDDPADVMTFS--KKMMT--GGFFH-KE--------------EFR-PNAPY-RIFNTWLGDPSKNLLLAEV 367 (472)
T ss_dssp SSSGGGGGCCSSCCSEEEEC--GGGSS--EEEEE-CG--------------GGS-CSSSS-SSCCSSSSCHHHHHHHHHH
T ss_pred CchhccccCCCCCCCEEEEc--ccccc--CCccC-ch--------------hhc-ccccc-cccCccCccHHHHHHHHHH
Confidence 1 11111110 16888777 98422 47665 44 221 11111 0111123466777778889
Q ss_pred HHHHhcc
Q 018231 316 LKQVCTL 322 (359)
Q Consensus 316 l~~~~~~ 322 (359)
|+.+.++
T Consensus 368 l~~~~~~ 374 (472)
T 1ohv_A 368 INIIKRE 374 (472)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9887654
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.22 E-value=9.8e-10 Score=106.31 Aligned_cols=246 Identities=11% Similarity=0.035 Sum_probs=130.1
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhh--cC
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al--~~ 134 (359)
-.|+|.+|+.+.+.. +.+. . .+....+. .++ +.+++.+++..+.. ..++|+++++ |+..++... ..
T Consensus 81 ~~p~v~~Ai~~q~~~-~~~~--~-~~~~~~~~--~~~--lae~L~~~~p~~~~---~~v~f~~sGsEA~e~AlklAr~~t 149 (456)
T 4atq_A 81 SDPAVVAAVQEAAAH-FTHT--C-FMVTPYEG--YVA--VTEQLNRLTPGDHA---KRTVLFNSGAEAVENAVKVARLAT 149 (456)
T ss_dssp TCHHHHHHHHHHHHH-CSCC--T-TTTSCCHH--HHH--HHHHHHHHSSCSSC---EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh-ccCc--c-cCccCcHH--HHH--HHHHHHHhCCCCCC---cEEEEeCChHHHHHHHHHHHhhhh
Confidence 469999999887665 2111 0 01111122 222 45778887754322 1366665545 888776543 34
Q ss_pred CCCeeeecCCCCCcccCcc-----c-cccccceeeeeeeeEEEeccc--CCCC-CCCCHHHHHHHh-------hhhCCcE
Q 018231 135 PHDRIMALDLPHGGHLSHG-----Y-QTDTKKISAVSIFFETMPYRL--NEST-GYIDYDQLEKSA-------TLFRPKL 198 (359)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~-----~-~~~~~~~~~~g~~~~~v~~~~--~~~~-~~~d~e~l~~~i-------~~~~~k~ 198 (359)
...+|+.....|.+...-. . ..++....-....+..+|++. .... ...+.+.+++.+ ...++.+
T Consensus 150 ~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAA 229 (456)
T 4atq_A 150 GRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAA 229 (456)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEE
T ss_pred cCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEE
Confidence 5578888876665542100 0 001111100111122343321 1111 122333333332 2335677
Q ss_pred EEEcCC--CCCCh----hhHHHHHHHHHHcCCEEEEeccccc-cccccC--CCCCCCCCceEEEeCCCCcCCCCCc-eEE
Q 018231 199 IVAGAS--AYARL----YDYERIRKVCNKQKAIMLADMAHIS-GLVAAG--VIPSPFEYADVVTTTTHKSLRGPRG-AMI 268 (359)
Q Consensus 199 v~l~~~--n~g~~----~~l~~i~~la~~~~~~vivD~a~~~-g~~~~~--~~~~~~~~~D~v~~s~~K~l~gp~g-G~l 268 (359)
|++.|- +.|.+ .-+++|.++|++||+++|.|++|+. |..... ....+. ..|+++++ |.++|... |++
T Consensus 230 vivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av 306 (456)
T 4atq_A 230 IIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAI 306 (456)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEE
T ss_pred EEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceee
Confidence 777632 23433 3489999999999999999999863 332211 111111 26999998 98854333 888
Q ss_pred EEeCCcchhccCCcchhhhHHHhhccccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhhc
Q 018231 269 FFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVFS 332 (359)
Q Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~~ 332 (359)
++++ ++.+.+......+.+ +-|..+.+|..++|+.++++...++.+...
T Consensus 307 ~~~~--------------~i~~~~~~~~~~~Tf-~gnpla~aaala~L~~i~~~~l~~~~~~~g 355 (456)
T 4atq_A 307 TGRA--------------DLLDAVHPGGLGGTY-GGNPVACAAALAAIDTMEQHDLNGRARHIE 355 (456)
T ss_dssp EEEH--------------HHHTTSCTTSSCCSS-SSCHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred EecH--------------HHHhcccccCCCCCC-CCChHHHHhhHHHHHHHhhccHHHHHHHHH
Confidence 8887 444444332222223 335677777778899998876656665543
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.88 E-value=4.8e-08 Score=94.86 Aligned_cols=266 Identities=13% Similarity=0.103 Sum_probs=138.2
Q ss_pred CcHHHHHHHHhhhhccCCCCCCCCcccCCchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChH-HHHHHHHhhc---
Q 018231 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (359)
Q Consensus 58 ~~~~v~~al~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~-a~~~~~~al~--- 133 (359)
-.|.+.+|+.+.+.... .+. .+++. .....++ +.+++.++...+-+ .|+|+++++ |+..++....
T Consensus 84 ~~p~v~~Ai~~q~~~l~--~~~--~~~~~-~~~~~~~--lAe~L~~~~p~~~~----~v~f~~sGsEA~e~AiKlAr~~~ 152 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFP--GYH--AFFGR-MSDQTVM--LSEKLVEVSPFDSG----RVFYTNSGSEANDTMVKMLWFLH 152 (473)
T ss_dssp CCHHHHHHHHHHHHHCC--CCC--CCTTE-EEHHHHH--HHHHHHHHSSCSSC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--ccc--ccccc-cCHHHHH--HHHHHHhhCCCCcc----EEEEeCchHHHHHHHHHHHHHHH
Confidence 46999999988776521 010 11111 1112222 55778888765432 477877666 8887766431
Q ss_pred ----CCC-CeeeecCCCCCcccCcc----cccccc--ceeeeeeeeEEEeccc----CCCCCCC-------CHHHHHHHh
Q 018231 134 ----KPH-DRIMALDLPHGGHLSHG----YQTDTK--KISAVSIFFETMPYRL----NESTGYI-------DYDQLEKSA 191 (359)
Q Consensus 134 ----~~G-d~Vl~~~~~~~~~~~~~----~~~~~~--~~~~~g~~~~~v~~~~----~~~~~~~-------d~e~l~~~i 191 (359)
+++ .+|+.....|.+...-. -..+.. ...+.+ ...++.+. . +.... ..+++++.+
T Consensus 153 ~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~--~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~l~~~i 229 (473)
T 4e3q_A 153 AAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPG--FVHLTCPHYWRYG-EEGETEEQFVARLARELEETI 229 (473)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTT--EEEECCCCHHHHS-CTTCCHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCc--ccccCCCcccccc-cccchhhHHHHHHHHHHHHHH
Confidence 233 46777765555532100 000000 011112 12222211 1 11111 123455555
Q ss_pred hh---hCCcEEEEcCCC--CCCh----hhHHHHHHHHHHcCCEEEEeccccc-cccccCC--CCCCCCCceEEEeCCCCc
Q 018231 192 TL---FRPKLIVAGASA--YARL----YDYERIRKVCNKQKAIMLADMAHIS-GLVAAGV--IPSPFEYADVVTTTTHKS 259 (359)
Q Consensus 192 ~~---~~~k~v~l~~~n--~g~~----~~l~~i~~la~~~~~~vivD~a~~~-g~~~~~~--~~~~~~~~D~v~~s~~K~ 259 (359)
.+ .++.+|++.|-. .|.+ .-+++|.++|++||+++|.|++++. |...... ...+. ..|+++++ |.
T Consensus 230 ~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~~--K~ 306 (473)
T 4e3q_A 230 QREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIISS--KN 306 (473)
T ss_dssp HHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEEC--GG
T ss_pred HhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHhc--cc
Confidence 43 235566665322 3432 2389999999999999999999862 2221100 00010 25999988 99
Q ss_pred CCCC--CceEEEEeCCcchhccCCcchhhhHHHhhcc------ccCCCCCCCCcHHHHHHHHHHHHHHhccccchhHhhh
Q 018231 260 LRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQ------AVFPGLQGGPHNHTITGLAVALKQVCTLITFSHIHVF 331 (359)
Q Consensus 260 l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~gt~~~~~i~al~~Al~~~~~~~~~~~~~~~ 331 (359)
++|. +-|+++++++ +.+.+.. ....+...+-|..+.++..++|+.++++...++.++.
T Consensus 307 l~gG~~Pl~av~~~~~--------------i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~ 372 (473)
T 4e3q_A 307 LTAGFFPMGAVILGPE--------------LSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRL 372 (473)
T ss_dssp GGTTSSCCEEEEECHH--------------HHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHH
T ss_pred ccCCCCCcccccccHH--------------HHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHH
Confidence 8653 4488888883 3332211 1122222334567777777889999887666777766
Q ss_pred ccccchhhhhcccCCCccccCCCC
Q 018231 332 SLHVYPAFVSNQNNSENIEEDKGR 355 (359)
Q Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
.-+..... +.+.+...+++++|+
T Consensus 373 g~~l~~~L-~~l~~~~~v~~vRG~ 395 (473)
T 4e3q_A 373 APRFEERL-KHIAERPNIGEYRGI 395 (473)
T ss_dssp HHHHHHHH-HHHTTSTTEEEEEEE
T ss_pred HHHHHHHH-HHHhcCCCeeEEeec
Confidence 44333332 222333456776664
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.71 E-value=9.2e-08 Score=98.98 Aligned_cols=129 Identities=12% Similarity=0.003 Sum_probs=77.5
Q ss_pred HHHHHHhhh-------hCCcEEEEcCC--C-CCChh----hHHHHHHHHHHcCCEEEEecccc-ccccccCC--CCCCCC
Q 018231 185 DQLEKSATL-------FRPKLIVAGAS--A-YARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFE 247 (359)
Q Consensus 185 e~l~~~i~~-------~~~k~v~l~~~--n-~g~~~----~l~~i~~la~~~~~~vivD~a~~-~g~~~~~~--~~~~~~ 247 (359)
++|++.+.+ .++.+|++.|. + .|... -+++|.++|++||+++|+|++|+ +|...... ...+.
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv- 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC- 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence 567777652 24567776653 4 34333 28999999999999999999985 33322110 00010
Q ss_pred CceEEEeCCCCcCCCC--CceEEEEeCCcchhccCCcchhhhHHHhhccc-----cCCCCCCCCcHHHHHHHHHHHHHHh
Q 018231 248 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGKEVFYDYEEKINQA-----VFPGLQGGPHNHTITGLAVALKQVC 320 (359)
Q Consensus 248 ~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~gt~~~~~i~al~~Al~~~~ 320 (359)
..|+++++ |.|+|. +-|++++++ ++.+.+... ...+...+.|..+.+|..++|+.+.
T Consensus 656 ~PDiitls--K~L~gG~~Plgav~~~~--------------~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~ 719 (831)
T 4a0g_A 656 KPDIACFA--KLLTGGMVPLAVTLATD--------------AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFK 719 (831)
T ss_dssp CCSEEEEC--GGGGTTSSCCEEEEECH--------------HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe--cccccCccCcEEEEECH--------------HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHH
Confidence 25898877 999663 348888888 444444321 1122223445677777788899988
Q ss_pred ccccchhHhh
Q 018231 321 TLITFSHIHV 330 (359)
Q Consensus 321 ~~~~~~~~~~ 330 (359)
++...++.++
T Consensus 720 ~~~l~~~~~~ 729 (831)
T 4a0g_A 720 DPETNHNITS 729 (831)
T ss_dssp CTTTCTTBCT
T ss_pred hhHHHHHHHH
Confidence 7654444433
No 237
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=50.32 E-value=11 Score=35.50 Aligned_cols=28 Identities=11% Similarity=0.230 Sum_probs=25.1
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3367888999999999999999999987
No 238
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=47.28 E-value=1.1e+02 Score=25.28 Aligned_cols=90 Identities=7% Similarity=-0.050 Sum_probs=48.5
Q ss_pred EEECCChH-HHHHHHHhhcCCC-CeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh
Q 018231 116 VQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (359)
Q Consensus 116 v~~tsG~~-a~~~~~~al~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~ 193 (359)
|++|.|+. .-..++..|++.| -+|++..-..... . ......+..+..++. |.+++++.++
T Consensus 26 vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~----~-------~~~~~~~~~~~~Dl~------d~~~~~~~~~- 87 (236)
T 3qvo_A 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI----H-------KPYPTNSQIIMGDVL------NHAALKQAMQ- 87 (236)
T ss_dssp EEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS----C-------SSCCTTEEEEECCTT------CHHHHHHHHT-
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh----c-------ccccCCcEEEEecCC------CHHHHHHHhc-
Confidence 66655444 3333778888999 5776554211100 0 011112333433333 7889998886
Q ss_pred hCCcEEEEcCCCCCChhhHHHHHHHHHHcCC
Q 018231 194 FRPKLIVAGASAYARLYDYERIRKVCNKQKA 224 (359)
Q Consensus 194 ~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~ 224 (359)
+..+|+.+..........+.+.+.+++.++
T Consensus 88 -~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 88 -GQDIVYANLTGEDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp -TCSEEEEECCSTTHHHHHHHHHHHHHHTTC
T ss_pred -CCCEEEEcCCCCchhHHHHHHHHHHHHcCC
Confidence 467776553222222345677888888765
No 239
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=45.80 E-value=37 Score=26.94 Aligned_cols=42 Identities=14% Similarity=-0.031 Sum_probs=32.9
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcC
Q 018231 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 223 (359)
Q Consensus 182 ~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~ 223 (359)
..++++.+.+.+.++.+|.++..++.....+.++.+.+++.+
T Consensus 56 ~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 56 QTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcC
Confidence 467888888877789999998666666777888888887754
No 240
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=43.66 E-value=17 Score=33.60 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=24.7
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4467788899999999999999999977
No 241
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=42.52 E-value=19 Score=33.76 Aligned_cols=26 Identities=8% Similarity=0.276 Sum_probs=23.1
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 66 ~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 66 YGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 56778899999999999999999977
No 242
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=41.81 E-value=18 Score=33.95 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=25.0
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3468888999999999999999999987
No 243
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=41.69 E-value=20 Score=34.08 Aligned_cols=28 Identities=7% Similarity=0.154 Sum_probs=25.2
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3468889999999999999999999977
No 244
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=41.35 E-value=24 Score=32.14 Aligned_cols=50 Identities=6% Similarity=-0.161 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
..+|+....+++.. ....+-++|.|.|....++++.+.|+++|+.+-+--
T Consensus 91 iHf~~~lal~a~e~-G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGv 140 (366)
T 3noy_A 91 IHFAPSYAFLSMEK-GVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGV 140 (366)
T ss_dssp CCSCHHHHHHHHHT-TCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCHHHHHHHHHh-CCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEec
Confidence 45678777777765 577888999999888889999999999999988753
No 245
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=40.92 E-value=20 Score=33.91 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=24.6
Q ss_pred CCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 205 n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
.+|+..+++++++-||++|+-||+|.+
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 368888999999999999999999976
No 246
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=40.89 E-value=20 Score=33.96 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=24.5
Q ss_pred CCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 205 n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
.+|+..+++++++-||++|+-||+|.+
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 367888999999999999999999977
No 247
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=40.67 E-value=21 Score=34.32 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=25.4
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3478899999999999999999999987
No 248
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=40.53 E-value=64 Score=26.53 Aligned_cols=51 Identities=8% Similarity=0.108 Sum_probs=38.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcC----CEEEEecc
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 231 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~----~~vivD~a 231 (359)
....+++.+.+.+.++++|.++..++.....+.++.+.+++.+ +.+++=++
T Consensus 125 ~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 125 DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 3568888888877799999988666556667888888887754 77777554
No 249
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=39.24 E-value=22 Score=34.12 Aligned_cols=26 Identities=12% Similarity=0.356 Sum_probs=23.0
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||.|.+
T Consensus 76 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 76 YGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 46777899999999999999999987
No 250
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=39.18 E-value=23 Score=33.15 Aligned_cols=28 Identities=11% Similarity=0.212 Sum_probs=25.0
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3468888999999999999999999987
No 251
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=39.02 E-value=24 Score=34.02 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=25.4
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4478889999999999999999999987
No 252
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=38.40 E-value=20 Score=25.90 Aligned_cols=12 Identities=33% Similarity=0.656 Sum_probs=9.4
Q ss_pred hcCCCCeeeecC
Q 018231 132 LLKPHDRIMALD 143 (359)
Q Consensus 132 l~~~Gd~Vl~~~ 143 (359)
++++||.|++..
T Consensus 54 l~~~GD~vII~a 65 (96)
T 1vc3_B 54 LVKPGDLVILVA 65 (96)
T ss_dssp TCCTTCEEEEEE
T ss_pred cCCCCCEEEEEE
Confidence 488999998754
No 253
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=38.19 E-value=65 Score=29.34 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+++++++.+......+|.+.+...|.+.+..+++++|+++|+.+++=
T Consensus 245 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 245 CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 34578999999887567888877877899999999999999999977765
No 254
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=38.18 E-value=24 Score=33.39 Aligned_cols=28 Identities=11% Similarity=0.288 Sum_probs=25.3
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4478889999999999999999999976
No 255
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=38.16 E-value=25 Score=25.63 Aligned_cols=14 Identities=14% Similarity=0.389 Sum_probs=10.3
Q ss_pred HhhcCCCCeeeecC
Q 018231 130 TALLKPHDRIMALD 143 (359)
Q Consensus 130 ~al~~~Gd~Vl~~~ 143 (359)
.-+++|||.|++..
T Consensus 51 Arl~~~GD~vII~a 64 (102)
T 3plx_B 51 ARLAEVGDKVIIMS 64 (102)
T ss_dssp GGGCCTTCEEEEEE
T ss_pred HhccCCCCEEEEEE
Confidence 33488999998754
No 256
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=36.82 E-value=83 Score=23.53 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=29.1
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
..+..+.+...+.++|++. ++.+...-...|..+|++++++++.
T Consensus 25 ~~~v~kai~~gkakLViiA-~D~~~~~~~~~l~~lc~~~~VP~~~ 68 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIA-GDIWPADVISHIPVLCEDHSVPYIF 68 (121)
T ss_dssp HHHHHHHHHHSCCCEEEEC-TTCSCTTHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCCHHHHHHHHHHHHHhcCCcEEE
Confidence 4556667776578888774 3333222266788999999998643
No 257
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=36.16 E-value=74 Score=28.77 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=39.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
..+++++++.+......++.+-++..|.+.+..+++++|+++|+.+++
T Consensus 242 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 289 (368)
T 1sjd_A 242 IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWC 289 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEe
Confidence 457888888887645778877777789999999999999999998444
No 258
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=35.68 E-value=23 Score=33.59 Aligned_cols=26 Identities=15% Similarity=0.469 Sum_probs=23.3
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 56778899999999999999999987
No 259
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=35.10 E-value=1e+02 Score=28.19 Aligned_cols=50 Identities=6% Similarity=-0.006 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+.+++++.+......+|.+.++..|.+.+..+++++|+++|+.++.=
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~ 302 (383)
T 3i4k_A 253 SVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGA 302 (383)
T ss_dssp TCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeC
Confidence 34578888888876457888887888899999999999999999998754
No 260
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=34.56 E-value=27 Score=33.06 Aligned_cols=28 Identities=7% Similarity=0.241 Sum_probs=25.2
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4478888999999999999999999987
No 261
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=34.43 E-value=40 Score=26.12 Aligned_cols=14 Identities=14% Similarity=0.304 Sum_probs=9.8
Q ss_pred hhhCCcEEEEcCCC
Q 018231 192 TLFRPKLIVAGASA 205 (359)
Q Consensus 192 ~~~~~k~v~l~~~n 205 (359)
..++|++|++...|
T Consensus 116 ~~~~P~VV~vd~~N 129 (143)
T 1pqh_A 116 RTWRPNVAYFEGDN 129 (143)
T ss_dssp TTCCCEEEEEETTT
T ss_pred ccCCCeEEEECCCC
Confidence 34578888887666
No 262
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=34.33 E-value=62 Score=29.38 Aligned_cols=51 Identities=4% Similarity=0.046 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
...+++++++.+......+|.+.+...|.+....+++++|+++|+.++.=+
T Consensus 250 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 250 NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcccc
Confidence 345789999988875567776667778999999999999999999877743
No 263
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=34.22 E-value=25 Score=33.18 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=22.5
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 93 ~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 93 LGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 46677899999999999999999976
No 264
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=34.21 E-value=84 Score=28.49 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=39.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
..+.+++++.+......++.+-++..|.+.+..+++++|+++|+.+++
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 295 (375)
T 1r0m_A 248 VASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWC 295 (375)
T ss_dssp CCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEe
Confidence 357888888887645778877777789999999999999999998443
No 265
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.45 E-value=98 Score=22.09 Aligned_cols=43 Identities=12% Similarity=-0.041 Sum_probs=30.1
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
.++..+.+...+.++|++. ++. ...-.+.|..+|++++++++.
T Consensus 20 ~~~v~kai~~gka~lViiA-~D~-~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVA-KNA-PKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEE-CCC-CHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCccEEEEe-CCC-CHHHHHHHHHHHHHcCCCEEE
Confidence 4666777777678888774 332 244467888899999998643
No 266
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=33.45 E-value=27 Score=32.56 Aligned_cols=26 Identities=12% Similarity=0.363 Sum_probs=22.6
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||.|.+
T Consensus 78 ~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 78 FGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 56778899999999999999999976
No 267
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=33.43 E-value=88 Score=28.39 Aligned_cols=51 Identities=8% Similarity=-0.060 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
...+.+++++.+......++.+.++..|.+.+..+++++|+++|+.+++-+
T Consensus 243 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 293 (368)
T 3q45_A 243 SCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG 293 (368)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 345788999888765678888778889999999999999999999887643
No 268
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=33.14 E-value=97 Score=22.67 Aligned_cols=42 Identities=12% Similarity=-0.056 Sum_probs=29.0
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vi 227 (359)
.+...+.+...+.++|++. ++. ...-...|..+|++++++++
T Consensus 26 ~~~v~kai~~gka~lViiA-~D~-~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLA-GNI-PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHTTCCSEEEEC-TTC-BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCC-CHHHHHHHHHHHHHcCCCEE
Confidence 4566777776577887764 333 34446788889999998754
No 269
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=32.66 E-value=23 Score=33.53 Aligned_cols=26 Identities=12% Similarity=0.257 Sum_probs=23.4
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 71 ~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 71 SGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp TEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56778899999999999999999976
No 270
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=32.61 E-value=1.5e+02 Score=25.64 Aligned_cols=51 Identities=6% Similarity=0.179 Sum_probs=37.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCC---ChhhHHHHHHHHHHcC----CEEEEecc
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYA---RLYDYERIRKVCNKQK----AIMLADMA 231 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g---~~~~l~~i~~la~~~~----~~vivD~a 231 (359)
.+.++++.+++.+.++.+|.++...+. ....+.++.+.+++.+ +.+++=++
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 457888888887779999998766655 5666788888887765 67776554
No 271
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=32.48 E-value=33 Score=33.27 Aligned_cols=26 Identities=19% Similarity=0.464 Sum_probs=22.6
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 76 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 76 YGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45677899999999999999999977
No 272
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=32.40 E-value=24 Score=24.79 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018231 212 YERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 212 l~~i~~la~~~~~~vivD~a 231 (359)
-.+|.++|+++|++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 46899999999999999954
No 273
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=32.19 E-value=98 Score=23.41 Aligned_cols=51 Identities=6% Similarity=0.111 Sum_probs=31.7
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEE-Eecccccc
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISG 235 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vi-vD~a~~~g 235 (359)
..+..+.+...+.+++++. ++.....-...|..+|++++++++ ++.-.-.|
T Consensus 29 ~~~v~Kai~~gka~LViiA-~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG 80 (126)
T 2xzm_U 29 LHEVLRTIEAKQALFVCVA-EDCDQGNYVKLVKALCAKNEIKYVSVPKRASLG 80 (126)
T ss_dssp HHHHHHHHHHTCCSEEEEE-SSCCSTTHHHHHHHHHHHTTCCEEEESCSHHHH
T ss_pred HHHHHHHHHcCCceEEEEe-CCCChHHHHHHHHHHHHHhCCCEEEECCHHHHH
Confidence 3455666666578888774 333223335788899999999765 44333333
No 274
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=31.96 E-value=33 Score=33.60 Aligned_cols=26 Identities=19% Similarity=0.345 Sum_probs=23.0
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 195 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 195 YGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 35667899999999999999999987
No 275
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=31.79 E-value=96 Score=28.88 Aligned_cols=50 Identities=8% Similarity=-0.073 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+.+++.+.+...-..+|.+.++..|.+.+..+++++|+++|+.+++-
T Consensus 319 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~ 368 (431)
T 2fym_A 319 FVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVIS 368 (431)
T ss_dssp TTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 45577888888876446677766766888989999999999999987663
No 276
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=31.62 E-value=90 Score=24.03 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhhH----HHHH-HHHHHcCC-EEEEeccc
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDY----ERIR-KVCNKQKA-IMLADMAH 232 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~l----~~i~-~la~~~~~-~vivD~a~ 232 (359)
...+++.|.+.+.+.++..|++. |-| .|...+. ++.+ ++.++.++ +..+|+-.
T Consensus 38 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERl 98 (138)
T 1nu0_A 38 GTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERL 98 (138)
T ss_dssp TEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_pred cchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCc
Confidence 45689999999998889999998 766 6654442 2222 23334565 57889864
No 277
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=31.55 E-value=30 Score=32.41 Aligned_cols=26 Identities=15% Similarity=0.377 Sum_probs=23.0
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-|+++|+-||+|.+
T Consensus 80 ~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 80 YGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45677899999999999999999987
No 278
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=31.19 E-value=1.1e+02 Score=28.68 Aligned_cols=46 Identities=7% Similarity=0.010 Sum_probs=31.7
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
+++++++.+...-..++.+-.+..|.+.+.-+++++|+++|+.+++
T Consensus 333 n~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 333 NPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp CHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 5666666665533455555555577788888888888888887665
No 279
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=31.16 E-value=34 Score=34.11 Aligned_cols=28 Identities=4% Similarity=0.237 Sum_probs=25.1
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3467888999999999999999999987
No 280
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=30.95 E-value=25 Score=33.34 Aligned_cols=26 Identities=4% Similarity=0.098 Sum_probs=22.0
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 45667888999999999999999976
No 281
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=30.88 E-value=35 Score=34.01 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=25.2
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4468888999999999999999999987
No 282
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=30.79 E-value=35 Score=34.04 Aligned_cols=28 Identities=18% Similarity=0.434 Sum_probs=25.2
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4468888999999999999999999987
No 283
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=30.72 E-value=36 Score=33.23 Aligned_cols=25 Identities=8% Similarity=0.185 Sum_probs=22.3
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+++++++-||++|+-||.|.+
T Consensus 220 Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 220 GDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567899999999999999999986
No 284
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=30.58 E-value=28 Score=32.37 Aligned_cols=27 Identities=4% Similarity=0.107 Sum_probs=22.6
Q ss_pred CCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 205 n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
.+|+..+++++++-||++|+-||+|.+
T Consensus 70 ~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 70 YLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 357778888888889999999999976
No 285
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=30.19 E-value=1.1e+02 Score=21.83 Aligned_cols=43 Identities=16% Similarity=-0.001 Sum_probs=29.6
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
.++..+.+...+.+++++. ++. ...-...|..+|++++++++.
T Consensus 21 ~~~v~kai~~gka~lViiA-~D~-~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKMGGAKLIIVA-RNA-RPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHHTCCSEEEEE-TTS-CHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEe-CCC-CHHHHHHHHHHHHhcCCCEEE
Confidence 4566777776578888774 332 234467888899999998553
No 286
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=29.90 E-value=1.2e+02 Score=27.50 Aligned_cols=49 Identities=6% Similarity=-0.075 Sum_probs=40.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+.+++++.+......++.+.++..|.+.+..+|+++|+++|+.+++-
T Consensus 248 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~ 296 (370)
T 1chr_A 248 LSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGG 296 (370)
T ss_dssp CCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 4578888888876457788777888899999999999999999988764
No 287
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=29.84 E-value=38 Score=33.10 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.7
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 84 ~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 84 YGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 35667899999999999999999987
No 288
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=29.81 E-value=36 Score=33.37 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=23.4
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 205 ~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 205 YGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 56777899999999999999999987
No 289
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=29.79 E-value=37 Score=33.82 Aligned_cols=28 Identities=11% Similarity=0.351 Sum_probs=25.2
Q ss_pred CCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 204 ~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+|+..+++++++-||++|+-||+|.+
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4468888999999999999999999987
No 290
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=29.66 E-value=32 Score=33.28 Aligned_cols=26 Identities=8% Similarity=0.388 Sum_probs=22.6
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 75 FGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45667899999999999999999987
No 291
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=29.64 E-value=65 Score=24.62 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=33.4
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcC---CEEEEec
Q 018231 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADM 230 (359)
Q Consensus 182 ~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~---~~vivD~ 230 (359)
..++++.+++.+.++.+|.++...+.....++++.+..++.+ +.+++=+
T Consensus 41 ~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 41 SPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp ECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 367888777776699999988666555555677777776653 5555533
No 292
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=29.35 E-value=1.2e+02 Score=27.78 Aligned_cols=49 Identities=8% Similarity=0.114 Sum_probs=39.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+.+++++.+......++.+-++..|.+.+..+++++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~ 309 (393)
T 1wuf_A 261 IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCG 309 (393)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEec
Confidence 3577888888876446777777777898999999999999999988764
No 293
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.34 E-value=71 Score=22.02 Aligned_cols=44 Identities=11% Similarity=-0.080 Sum_probs=29.5
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+..+.+...+.+++++. ++... .-...+..+|++++++++.-
T Consensus 16 ~~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVA-KDADP-ILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEE-TTSCH-HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCeeEEEEe-CCCCH-HHHHHHHHHHHHcCCCEEEE
Confidence 4566677776567777764 33322 34678889999999976653
No 294
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=29.25 E-value=70 Score=26.31 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=33.8
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEE--EEeccc
Q 018231 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM--LADMAH 232 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~v--ivD~a~ 232 (359)
|.++|+++++. ..+.+++-. |.+..++++.+.++++|-.+ +.|-..
T Consensus 18 ~~~~l~~al~s-~~~~ifll~---g~i~~l~~~v~~lk~~~K~v~Vh~Dli~ 65 (192)
T 3kts_A 18 NQKDMEKILEL-DLTYMVMLE---THVAQLKALVKYAQAGGKKVLLHADLVN 65 (192)
T ss_dssp SSHHHHHHTTS-SCCEEEECS---EETTTHHHHHHHHHHTTCEEEEEGGGEE
T ss_pred CHHHHHHHHcC-CCCEEEEec---CcHHHHHHHHHHHHHcCCeEEEecCchh
Confidence 67899999876 677777753 34567899999999998654 445443
No 295
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=29.14 E-value=33 Score=33.92 Aligned_cols=49 Identities=6% Similarity=-0.023 Sum_probs=35.6
Q ss_pred CHHHHHHHh---hhhCCcEEEEcC-----CC--------------CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 183 DYDQLEKSA---TLFRPKLIVAGA-----SA--------------YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 183 d~e~l~~~i---~~~~~k~v~l~~-----~n--------------~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+.-|.+.| ++-...+|.|+| ++ +|+..+++++++-||++|+-||.|.+
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 666665544 344677887752 21 34667899999999999999999987
No 296
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=29.10 E-value=1e+02 Score=28.47 Aligned_cols=50 Identities=8% Similarity=0.025 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+.+++.+.+......++.+-++..|.+.+..+++++|+++|+.+++=
T Consensus 309 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~ 358 (413)
T 1kko_A 309 WCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQG 358 (413)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 55678899988876456777776777888889999999999999987774
No 297
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=29.04 E-value=37 Score=33.09 Aligned_cols=25 Identities=12% Similarity=0.279 Sum_probs=22.3
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+++++++-||++|+-||.|.+
T Consensus 217 Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 217 GDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4667899999999999999999976
No 298
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=28.73 E-value=34 Score=33.10 Aligned_cols=26 Identities=8% Similarity=0.377 Sum_probs=22.1
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++.||++|+-||+|.+
T Consensus 75 ~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 75 FGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 35667788999999999999999976
No 299
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=28.61 E-value=36 Score=33.07 Aligned_cols=26 Identities=15% Similarity=0.418 Sum_probs=23.0
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 89 ~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 89 YGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45677899999999999999999987
No 300
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=28.27 E-value=1.1e+02 Score=23.07 Aligned_cols=48 Identities=8% Similarity=-0.056 Sum_probs=33.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
.++.++++..+.+ ++.++++..-..+....-.++.+..+++|+-+-+-
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m 95 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVL 95 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEE
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEe
Confidence 4788999998887 89999987333333223356778888999865443
No 301
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=27.96 E-value=63 Score=29.31 Aligned_cols=51 Identities=14% Similarity=-0.083 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
...+++++++.+......++.+-+...|.+.+..+++++|+++|+.+++=.
T Consensus 247 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (371)
T 2ps2_A 247 LATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQE 297 (371)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 345788999888875677877766668888899999999999999887643
No 302
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=27.86 E-value=92 Score=25.88 Aligned_cols=34 Identities=6% Similarity=0.190 Sum_probs=27.1
Q ss_pred CCcEEEEcC--CC-CCChhhHHHHHHHHHHcCCEEEE
Q 018231 195 RPKLIVAGA--SA-YARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 195 ~~k~v~l~~--~n-~g~~~~l~~i~~la~~~~~~viv 228 (359)
.+..+++.- -| -|......++.++|++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 567776544 55 68888899999999999998774
No 303
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=27.75 E-value=1.2e+02 Score=27.89 Aligned_cols=57 Identities=2% Similarity=-0.072 Sum_probs=43.7
Q ss_pred EecccCCCCCCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 171 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
+|+-.+ ....+.+++.+.+......++.+-++..|.+.+..+++++|+++|+.+++=
T Consensus 302 ipIa~d--E~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~ 358 (413)
T 1kcz_A 302 AELVAD--EWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 358 (413)
T ss_dssp EEEEEC--TTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred CcEEeC--CCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 444344 235688999988876456777776777888889999999999999988873
No 304
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=27.71 E-value=34 Score=32.98 Aligned_cols=25 Identities=8% Similarity=0.238 Sum_probs=20.9
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+++++++-|+++|+-||+|.+
T Consensus 76 Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 76 GNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4566788888889999999999976
No 305
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=27.37 E-value=1e+02 Score=23.05 Aligned_cols=45 Identities=7% Similarity=0.184 Sum_probs=28.6
Q ss_pred CHHHHHHHhhh--------hCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEE
Q 018231 183 DYDQLEKSATL--------FRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (359)
Q Consensus 183 d~e~l~~~i~~--------~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vi 227 (359)
|++.+.+.+.+ .+-.-|++..+......++.+|.++++++|+.++
T Consensus 26 d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 26 EPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 77777666543 1233455553332234579999999999998763
No 306
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=27.30 E-value=74 Score=26.40 Aligned_cols=34 Identities=6% Similarity=0.102 Sum_probs=27.4
Q ss_pred CCcEEEEcCC-C-CCChhhHHHHHHHHHHcCCEEEE
Q 018231 195 RPKLIVAGAS-A-YARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 195 ~~k~v~l~~~-n-~g~~~~l~~i~~la~~~~~~viv 228 (359)
.+.++++.-- | .|......++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 6777776533 5 78889999999999999997764
No 307
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=27.22 E-value=74 Score=29.83 Aligned_cols=48 Identities=8% Similarity=0.011 Sum_probs=32.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
..+.+++.+.+...-..+|.+.++..|.+.+..+++++|+++|+.+++
T Consensus 332 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 332 VTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp TTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 456667776666534555555555567777788888888888887766
No 308
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=27.19 E-value=71 Score=29.05 Aligned_cols=50 Identities=8% Similarity=-0.097 Sum_probs=40.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
..+++++++.+......+|.+-+...|.+....+++++|+++|+.+++=+
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 295 (378)
T 2qdd_A 246 LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED 295 (378)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 44788888888765577777766668888899999999999999887763
No 309
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=26.96 E-value=87 Score=24.46 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=36.1
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh----HHHHH-HHHHHcCC-EEEEecccc
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD----YERIR-KVCNKQKA-IMLADMAHI 233 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~----l~~i~-~la~~~~~-~vivD~a~~ 233 (359)
...+.+.|.+.+.+.++..+++. |-| +|+..+ .+.++ .++++.++ ++.+|+..+
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 45588999999998888899887 655 553322 23333 44455676 477898753
No 310
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=26.91 E-value=46 Score=32.85 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=22.9
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||+|.+
T Consensus 159 ~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 159 LGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56777899999999999999999976
No 311
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=26.75 E-value=60 Score=29.63 Aligned_cols=50 Identities=6% Similarity=0.007 Sum_probs=40.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
..+++++++.+......+|.+.+...|.+....+++++|+++|+.+++=.
T Consensus 250 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 250 AFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc
Confidence 45889999988775677887776668889899999999999999777654
No 312
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=26.67 E-value=1.3e+02 Score=27.64 Aligned_cols=51 Identities=4% Similarity=0.004 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
...+.+++++.+......+|.+..+..|.+.+..+|+++|+++|+.+..-+
T Consensus 273 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 323 (410)
T 3dip_A 273 NLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPHX 323 (410)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECS
T ss_pred CcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeeeC
Confidence 345788999888775678887778888989999999999999999886543
No 313
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=26.47 E-value=2.3e+02 Score=23.88 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=26.7
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCC-CC---ChhhHHHHHHHHHHcCC
Q 018231 183 DYDQLEKSATLFRPKLIVAGASA-YA---RLYDYERIRKVCNKQKA 224 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n-~g---~~~~l~~i~~la~~~~~ 224 (359)
|.+.+++.++ +...|+.+... .. .......+.+.|++.++
T Consensus 55 d~~~l~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 55 NQESMVEAFK--GMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CHHHHHHHTT--TCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHh--CCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 7888988886 47777766322 22 22345678888888885
No 314
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=26.45 E-value=1.3e+02 Score=21.58 Aligned_cols=51 Identities=12% Similarity=-0.110 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-CCC-CCChhh----HHHHHH-HHHHcCCE-EEEecc
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD----YERIRK-VCNKQKAI-MLADMA 231 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~-~~n-~g~~~~----l~~i~~-la~~~~~~-vivD~a 231 (359)
...+++.|.+.+.+.++..+++. |-| .|...+ ..+.++ +.++ ++. ..+|+-
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DER 94 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWDER 94 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECCS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECCC
Confidence 34578889999988889999988 666 553322 333333 3334 664 677775
No 315
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=26.25 E-value=33 Score=24.90 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018231 212 YERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 212 l~~i~~la~~~~~~vivD~a 231 (359)
-++|.++|++||++++.|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 46899999999999999964
No 316
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=26.19 E-value=87 Score=28.66 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
...+++++++.+......+|.+-+...|.+....+++++|+++|+.+++=+.
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 253 KQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 3457899999887745677766677789999999999999999998776543
No 317
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=26.18 E-value=42 Score=32.76 Aligned_cols=49 Identities=8% Similarity=0.193 Sum_probs=34.8
Q ss_pred CHHHHHHHh---hhhCCcEEEEcC-----CC--------------CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 183 DYDQLEKSA---TLFRPKLIVAGA-----SA--------------YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 183 d~e~l~~~i---~~~~~k~v~l~~-----~n--------------~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+.+.| ++-....|.+.| ++ +|+..+++++++-||++|+-||.|.+
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 666655444 344677787742 11 24566799999999999999999987
No 318
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=26.04 E-value=1.3e+02 Score=23.72 Aligned_cols=46 Identities=7% Similarity=-0.057 Sum_probs=34.9
Q ss_pred HHHHHhhhhCCcEEEEcCC--CCCC-hhhHHHHHHHHHHcCCEEEEecc
Q 018231 186 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 186 ~l~~~i~~~~~k~v~l~~~--n~g~-~~~l~~i~~la~~~~~~vivD~a 231 (359)
.+.+.|.+.+..+|+..+. +-.. ..|...|.+.|-.|+++++.--+
T Consensus 73 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 73 QVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 4667777768888877644 4223 56888999999999999998754
No 319
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.96 E-value=36 Score=24.48 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018231 212 YERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 212 l~~i~~la~~~~~~vivD~a 231 (359)
-.+|.++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 46899999999999999954
No 320
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=25.83 E-value=81 Score=28.51 Aligned_cols=49 Identities=4% Similarity=-0.025 Sum_probs=40.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+++++++.+......+|.+.+...|.+.+..+++++|+++|+.+++-
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 294 (369)
T 2p8b_A 246 LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVG 294 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEec
Confidence 4578888888887567787776666888889999999999999988764
No 321
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=25.80 E-value=41 Score=33.63 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=35.6
Q ss_pred CHHHHHHHh---hhhCCcEEEEcC-----CC--------------CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 183 DYDQLEKSA---TLFRPKLIVAGA-----SA--------------YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 183 d~e~l~~~i---~~~~~k~v~l~~-----~n--------------~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..|.+.| ++-...+|.++| ++ +|+..+++++++-||++|+-||+|.+
T Consensus 263 dl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 263 DLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 666665544 334677887752 21 24667899999999999999999987
No 322
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=25.78 E-value=76 Score=29.52 Aligned_cols=46 Identities=7% Similarity=0.094 Sum_probs=29.2
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
+..++.+.+...-..++.+.++..|.+.+..+++++|+++|+.+++
T Consensus 320 ~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 320 NVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp CHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 4666666665533455555455566677777777777777776655
No 323
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=25.45 E-value=84 Score=28.31 Aligned_cols=52 Identities=8% Similarity=0.045 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
...+.+++++.+......++.+.++..|.+.+..+++++|+++|+.+++-..
T Consensus 242 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 293 (354)
T 3jva_A 242 SCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCM 293 (354)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 3557888888887656788877777788898999999999999999876543
No 324
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=25.45 E-value=42 Score=33.20 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=21.7
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+++++++-||++|+-||+|.+
T Consensus 153 Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 153 GSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3556789999999999999999977
No 325
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=25.27 E-value=77 Score=28.66 Aligned_cols=51 Identities=4% Similarity=-0.086 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
...+.+++++.+......++.+-++..|.+.+..+++++|+++|+.+++=.
T Consensus 247 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 247 SLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 345788999988764577777766668889999999999999999877643
No 326
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=25.21 E-value=67 Score=29.23 Aligned_cols=50 Identities=2% Similarity=-0.162 Sum_probs=40.9
Q ss_pred CCCC-HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYID-YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d-~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+ ++++++.+......+|.+.++..|.+.+..+++++|+++|+.++.=
T Consensus 259 ~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 259 SAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 3457 8899999887567788777766888999999999999999977765
No 327
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=25.13 E-value=1.9e+02 Score=20.73 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=30.0
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
.++..+.+...+.+++++. ++.+ ..-.++|..+|.+++++++.
T Consensus 27 ~~~v~kai~~gkaklViiA-~D~~-~~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFIS-NNCP-TVRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp HHHHHHHHHHTCCCEEEEC-TTSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCC-HHHHHHHHHHHHHcCCcEEE
Confidence 4666777777678888774 3322 22367788899999999883
No 328
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=25.04 E-value=83 Score=29.46 Aligned_cols=46 Identities=2% Similarity=-0.053 Sum_probs=31.1
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
++.++.+.+...-..+|.+-.+..|.+.+..+++++|+++|+.+++
T Consensus 326 ~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 326 NPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 5666666666533455555455567777888888888888887654
No 329
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=25.04 E-value=35 Score=24.77 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018231 212 YERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 212 l~~i~~la~~~~~~vivD~a 231 (359)
-.+|.++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 46899999999999999954
No 330
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=24.97 E-value=1.1e+02 Score=22.02 Aligned_cols=13 Identities=8% Similarity=0.432 Sum_probs=9.6
Q ss_pred hhCCcEEEEcCCC
Q 018231 193 LFRPKLIVAGASA 205 (359)
Q Consensus 193 ~~~~k~v~l~~~n 205 (359)
.++|+++++...|
T Consensus 74 ~~~P~vV~vd~~N 86 (97)
T 1uhe_A 74 AHKPSIVLVDEKN 86 (97)
T ss_dssp HCCCEEEEECTTS
T ss_pred cCCCEEEEECCCC
Confidence 4588888887655
No 331
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=24.95 E-value=54 Score=29.58 Aligned_cols=50 Identities=10% Similarity=0.130 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+++++++.+......+|.+.+...|.+....+++++|+++|+.+++=
T Consensus 248 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 248 NWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCB
T ss_pred CCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeec
Confidence 34578899988877456777666777898989999999999999876665
No 332
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=24.87 E-value=1.9e+02 Score=20.82 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=30.7
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
.++..+.+...+.++|++. ++.+ ..-.+.|..+|++++++++.
T Consensus 27 ~~~v~kai~~gkaklVilA-~D~~-~~~~~~i~~~c~~~~ip~~~ 69 (105)
T 3u5e_c 27 YKSTVKSLRQGKSKLIIIA-ANTP-VLRKSELEYYAMLSKTKVYY 69 (105)
T ss_dssp HHHHHHHHHTTCCSEEEEC-TTSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCC-HHHHHHHHHHHHHcCCCEEE
Confidence 4666777877678888774 3333 33467888999999999983
No 333
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=24.37 E-value=87 Score=29.35 Aligned_cols=47 Identities=4% Similarity=0.020 Sum_probs=31.5
Q ss_pred CCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 182 ~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
.+++++.+.+...-..+|.+-.+..|.+.+..+++++|+++|+.+++
T Consensus 322 t~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 322 TNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp TCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 36666766666523455555455567777788888888888887655
No 334
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=23.71 E-value=88 Score=28.70 Aligned_cols=50 Identities=8% Similarity=0.052 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+.+++++.+......+|.+-++..|.+....+++++|+++|+.++.=
T Consensus 255 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 255 AAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp TCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 34578889988877557787776666888888999999999999987754
No 335
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=23.64 E-value=97 Score=28.81 Aligned_cols=47 Identities=6% Similarity=0.070 Sum_probs=33.9
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
++.++.+.+...-..++.+-.+..|.+.+..+++++|+++|+.+++=
T Consensus 316 n~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vs 362 (417)
T 3qn3_A 316 NEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMS 362 (417)
T ss_dssp CHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 37777777766345565555555788888888999999999887763
No 336
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=23.63 E-value=92 Score=23.85 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=27.8
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
..+..+.+...+.++|++. ++.+...-...|..+|+++|++++.
T Consensus 37 ~~~v~kai~~gkakLViiA-~D~~p~~~~~~l~~lc~~~~VP~~~ 80 (134)
T 2ale_A 37 ANEATKTLNRGISEFIIMA-ADCEPIEILLHLPLLCEDKNVPYVF 80 (134)
T ss_dssp HHHHHHHHHHTCEEEEEEE-TTCSSGGGGTHHHHHHHHHTCCEEE
T ss_pred chHHHHHHHhCCCeEEEEe-CCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 4556666766566777764 3333222356777899999998543
No 337
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=23.62 E-value=74 Score=29.12 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+++++++.+......+|.+.+...|.+.+..+++++|+++|+.+++=
T Consensus 259 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 259 VYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp CCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecC
Confidence 4568888988876456777666777899999999999999999988774
No 338
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=23.38 E-value=1.6e+02 Score=21.01 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=29.3
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
.++..+.+...+.++|++. ++.+. .-.+.|..+|++++++++.
T Consensus 23 ~~~v~kai~~gka~lViiA-~D~~~-~~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILS-SDAGI-HTKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEE-TTSCH-HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEe-CCCCH-HHHHHHHHHHHHcCCCEEE
Confidence 4667777876678888774 33221 2366788899999997654
No 339
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=23.22 E-value=59 Score=32.55 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=21.9
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+++++++-|+++|+-||+|.+
T Consensus 318 Gt~edfk~LV~~aH~~GI~VilD~V 342 (695)
T 3zss_A 318 GTLDDFDHFVTEAGKLGLEIALDFA 342 (695)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEee
Confidence 4556799999999999999999987
No 340
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=22.92 E-value=3.2e+02 Score=22.50 Aligned_cols=49 Identities=20% Similarity=0.225 Sum_probs=27.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeEEECCChHHHHHHHHhhcCCCCeeeecC
Q 018231 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143 (359)
Q Consensus 86 ~~~~~~~l~~~~~~~~a~~~g~~~~~~~~~v~~tsG~~a~~~~~~al~~~Gd~Vl~~~ 143 (359)
+.+..++.-+.+.++.+++ |.+. ..|..++|.+|.. ++..+ .| ++++..
T Consensus 32 G~eNT~~tl~la~era~e~-~Ik~----iVVASssG~TA~k-~~e~~--~~-~lVvVT 80 (206)
T 1t57_A 32 GKENTERVLELVGERADQL-GIRN----FVVASVSGETALR-LSEMV--EG-NIVSVT 80 (206)
T ss_dssp SGGGHHHHHHHHHHHHHHH-TCCE----EEEECSSSHHHHH-HHTTC--CS-EEEEEC
T ss_pred CcccHHHHHHHHHHHHHHc-CCCE----EEEEeCCCHHHHH-HHHHc--cC-CEEEEe
Confidence 4455555555565666554 6664 2344456666765 55544 45 666655
No 341
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=22.87 E-value=1.8e+02 Score=20.81 Aligned_cols=43 Identities=19% Similarity=0.154 Sum_probs=29.2
Q ss_pred HHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 184 ~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
.++..+.+...+.++|++. ++.+ ..-...+..+|++++++++.
T Consensus 24 ~~~v~kai~~gka~lViiA-~D~~-~~~~~~i~~~c~~~~vp~~~ 66 (101)
T 3v7q_A 24 EDLVIKEIRNARAKLVLLT-EDAS-SNTAKKVTDKCNYYKVPYKK 66 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEE-TTSC-HHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhHHHHhcCceeEEEEe-cccc-ccchhhhcccccccCCCeee
Confidence 4667777877678888774 3322 22466788889999987654
No 342
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=22.73 E-value=1.9e+02 Score=24.11 Aligned_cols=28 Identities=18% Similarity=0.154 Sum_probs=19.4
Q ss_pred EEECCChH-HHHHHHHhhcCCCCeeeecC
Q 018231 116 VQSLSGSP-SNFQVYTALLKPHDRIMALD 143 (359)
Q Consensus 116 v~~tsG~~-a~~~~~~al~~~Gd~Vl~~~ 143 (359)
+++|.|+. .-..+...|.+.|-+|++.+
T Consensus 10 ~lVTGas~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 10 FIVTGASSGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 56665555 33447778888999988765
No 343
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=22.71 E-value=94 Score=28.33 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+.+++++.+......+|.+.....|.+.+..+|+++|+++|+.+.+=
T Consensus 245 ~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~ 294 (378)
T 3eez_A 245 CLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVM 294 (378)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcC
Confidence 34578888888876457787777777888999999999999999998754
No 344
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=22.65 E-value=1.2e+02 Score=27.97 Aligned_cols=49 Identities=6% Similarity=-0.068 Sum_probs=40.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+.+++++.+......++.+..+..|.+.+..+|+++|+++|+.+..-
T Consensus 270 ~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h 318 (400)
T 4dxk_A 270 LGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPH 318 (400)
T ss_dssp CCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 4578888888876457787777888898999999999999999988764
No 345
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=22.43 E-value=1.1e+02 Score=27.22 Aligned_cols=50 Identities=8% Similarity=0.022 Sum_probs=40.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
..+..++.+.+......++.+.+...|.+.+..+|+++|+++|+.++.=+
T Consensus 223 ~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 272 (342)
T 2okt_A 223 ATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGG 272 (342)
T ss_dssp CCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBC
T ss_pred CCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcC
Confidence 45788888888764567777667668888899999999999999877764
No 346
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=22.39 E-value=91 Score=28.56 Aligned_cols=49 Identities=8% Similarity=-0.048 Sum_probs=40.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+++++++.+......+|.+.++..|.+.+..+|+++|+++|+.+..-
T Consensus 256 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 256 LYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred CCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 4578888888876456777666777899999999999999999988765
No 347
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=22.29 E-value=1.3e+02 Score=25.10 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=26.8
Q ss_pred CCcEEEEcCCC-CCChhhHHHHHHHHHHcCCEEEE
Q 018231 195 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 195 ~~k~v~l~~~n-~g~~~~l~~i~~la~~~~~~viv 228 (359)
.|.++++.-.| -|......++.++|++||+.++.
T Consensus 167 ~Pa~vicEi~~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELTNDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEeCCCCCccCHHHHHHHHHHcCCCEEE
Confidence 57777665334 68888999999999999997765
No 348
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=22.26 E-value=81 Score=28.91 Aligned_cols=51 Identities=6% Similarity=-0.037 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
...+.+++++.+......+|.+-+...|.+.+..+++++|+++|+.++.=+
T Consensus 248 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 298 (397)
T 2qde_A 248 SAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGC 298 (397)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC
T ss_pred CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEec
Confidence 345788899888775677877766668888899999999999999877764
No 349
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=22.01 E-value=90 Score=28.44 Aligned_cols=50 Identities=6% Similarity=-0.089 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
...+++++++.+......++.+-++..|.+.+..+++++|+++|+.+++=
T Consensus 244 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 244 NMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred CcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 34578889988876456777666777898989999999999999987765
No 350
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=21.96 E-value=79 Score=29.10 Aligned_cols=50 Identities=4% Similarity=-0.103 Sum_probs=40.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
..+++++++.+......+|.+.++..|.+.+..+++++|+++|+.+++=.
T Consensus 278 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 327 (410)
T 2gl5_A 278 SYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHV 327 (410)
T ss_dssp CCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 44788999988774567776667778989999999999999999887743
No 351
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=21.95 E-value=86 Score=28.31 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+.+++++.+......++.+-++..|.+.+..+++++|+++|+.+++=
T Consensus 247 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 295 (366)
T 1tkk_A 247 VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVG 295 (366)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEec
Confidence 4578888888876457777776666888889999999999999987664
No 352
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=21.93 E-value=88 Score=28.25 Aligned_cols=48 Identities=6% Similarity=0.026 Sum_probs=37.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEE
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~viv 228 (359)
..+.+++++.+......++.+-++..|.+.+..+++++|+++|+.+++
T Consensus 241 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 288 (369)
T 2zc8_A 241 LTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWM 288 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEe
Confidence 357788888887645777777666688888899999999999998443
No 353
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=21.63 E-value=65 Score=33.05 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=22.7
Q ss_pred CCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 206 ~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+|+..+++++++-||++|+-||.|-+
T Consensus 689 ~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 689 YGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45567789999999999999999987
No 354
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=21.61 E-value=91 Score=28.56 Aligned_cols=50 Identities=4% Similarity=-0.059 Sum_probs=40.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
..+.+++++.+......++.+.++..|.+.+..+|+++|+++|+.++.-+
T Consensus 247 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 247 VWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT 296 (391)
T ss_dssp CCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 45788888888764577877777778889899999999999999987643
No 355
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=21.37 E-value=2.4e+02 Score=23.62 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=34.7
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+++++.+.. ....|++....-.....++++.+.++++|+.+++|..
T Consensus 90 ~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (232)
T 3igs_A 90 FLDDVDALAQA-GAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS 137 (232)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC
T ss_pred cHHHHHHHHHc-CCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 45677777665 7888877643322235788999999999999999853
No 356
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=21.16 E-value=3.2e+02 Score=23.81 Aligned_cols=100 Identities=15% Similarity=0.048 Sum_probs=51.9
Q ss_pred EEECCChH--HHHHHHHhhcCCCCeeeecCCCCCcccCccccccccceeeeeeeeEEEecccCCCCCCCCHHHHHHHhhh
Q 018231 116 VQSLSGSP--SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (359)
Q Consensus 116 v~~tsG~~--a~~~~~~al~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~ 193 (359)
|++|.|+. +.. ++..|++.|.+|.+..-...+. +..... ...+....+..+..++. |.+.+.+.+++
T Consensus 13 IlVtGatG~iG~~-l~~~L~~~g~~V~~l~R~~~~~--~~~~~~--~~~l~~~~v~~~~~Dl~------d~~~l~~~~~~ 81 (346)
T 3i6i_A 13 VLIAGATGFIGQF-VATASLDAHRPTYILARPGPRS--PSKAKI--FKALEDKGAIIVYGLIN------EQEAMEKILKE 81 (346)
T ss_dssp EEEECTTSHHHHH-HHHHHHHTTCCEEEEECSSCCC--HHHHHH--HHHHHHTTCEEEECCTT------CHHHHHHHHHH
T ss_pred EEEECCCcHHHHH-HHHHHHHCCCCEEEEECCCCCC--hhHHHH--HHHHHhCCcEEEEeecC------CHHHHHHHHhh
Confidence 66655433 444 7777877787777654221110 100000 00011112333443333 78999999985
Q ss_pred hCCcEEEEcCCCCCChhhHHHHHHHHHHcC-CEEE
Q 018231 194 FRPKLIVAGASAYARLYDYERIRKVCNKQK-AIML 227 (359)
Q Consensus 194 ~~~k~v~l~~~n~g~~~~l~~i~~la~~~~-~~vi 227 (359)
.++.+|+.+... ..+.....+.+.|++.+ +..+
T Consensus 82 ~~~d~Vi~~a~~-~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 82 HEIDIVVSTVGG-ESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp TTCCEEEECCCG-GGGGGHHHHHHHHHHHCCCSEE
T ss_pred CCCCEEEECCch-hhHHHHHHHHHHHHHcCCceEE
Confidence 567777765221 12233467888898888 6433
No 357
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=21.11 E-value=2.4e+02 Score=23.51 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=34.6
Q ss_pred CHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 183 d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.+++++.+.. ...+|++....-.....++++.+.++++|+.+++|..
T Consensus 90 ~~~~i~~~~~a-Gad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (229)
T 3q58_A 90 YLQDVDALAQA-GADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS 137 (229)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS
T ss_pred cHHHHHHHHHc-CCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC
Confidence 45677776665 7888877643322235788999999999999999853
No 358
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=21.03 E-value=94 Score=26.24 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=26.6
Q ss_pred CCcEEEEcCCC-CCChhhHHHHHHHHHHcCCEEEE
Q 018231 195 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 228 (359)
Q Consensus 195 ~~k~v~l~~~n-~g~~~~l~~i~~la~~~~~~viv 228 (359)
.+.++++.--| -|......++.++|++||+.++.
T Consensus 178 ~Pa~VicEi~~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 56666654334 68888999999999999998765
No 359
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=21.02 E-value=75 Score=29.22 Aligned_cols=49 Identities=4% Similarity=-0.121 Sum_probs=39.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+++++++.+......+|.+.++..|.+.+..+++++|+++|+.++.=
T Consensus 275 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 275 IYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 4478899998877456777666777898999999999999999988774
No 360
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=21.00 E-value=1.6e+02 Score=23.88 Aligned_cols=46 Identities=4% Similarity=-0.086 Sum_probs=34.9
Q ss_pred HHHHHhhhhCCcEEEEcCC--CCCC-hhhHHHHHHHHHHcCCEEEEecc
Q 018231 186 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 186 ~l~~~i~~~~~k~v~l~~~--n~g~-~~~l~~i~~la~~~~~~vivD~a 231 (359)
.+.+.|.+.+..+|+..+. +-.. ..|...|.+.|-.++++++.--+
T Consensus 89 qI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnla 137 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRS 137 (178)
T ss_dssp HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 4667777768888877644 4223 56899999999999999998754
No 361
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=20.92 E-value=60 Score=31.91 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=22.1
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+++++++-||++|+-||.|.+
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4566799999999999999999987
No 362
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=20.79 E-value=71 Score=31.41 Aligned_cols=25 Identities=8% Similarity=0.123 Sum_probs=21.9
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|...+++++++-|+++|+-||.|.+
T Consensus 200 G~~~~~~~lv~~~H~~Gi~VilD~V 224 (618)
T 3m07_A 200 GTPDDFKAFIDAAHGYGLSVVLDIV 224 (618)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEeec
Confidence 4556799999999999999999987
No 363
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=20.54 E-value=1.2e+02 Score=27.61 Aligned_cols=49 Identities=8% Similarity=0.076 Sum_probs=38.6
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+.+++.+.+......++.+-++..|.+.+..+++++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~ 309 (386)
T 1wue_A 261 IRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLG 309 (386)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEEC
Confidence 3467888888876446777766666888888999999999999988764
No 364
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=20.51 E-value=1.9e+02 Score=25.82 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=27.5
Q ss_pred CCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 195 ~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
+.++++++.-..+....+.++.+.|+++|+.+++|..
T Consensus 186 ~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 222 (352)
T 4e84_A 186 QHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPK 222 (352)
T ss_dssp GCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECC
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 4778888622223444588899999999999999975
No 365
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=20.38 E-value=1.7e+02 Score=21.87 Aligned_cols=37 Identities=11% Similarity=0.210 Sum_probs=25.7
Q ss_pred HHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEE
Q 018231 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (359)
Q Consensus 185 e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vi 227 (359)
+.+++.... .+|.+++++ |.. -+++.++|+++|+-++
T Consensus 73 ~~v~e~~~~-g~k~v~~~~---G~~--~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 73 SEYNYILSL-KPKRVIFNP---GTE--NEELEEILSENGIEPV 109 (122)
T ss_dssp GGHHHHHHH-CCSEEEECT---TCC--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhc-CCCEEEECC---CCC--hHHHHHHHHHcCCeEE
Confidence 335555555 788887753 222 2589999999999887
No 366
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=20.25 E-value=3.4e+02 Score=23.65 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=35.3
Q ss_pred cccCCCCCCCCHHHHHHHhh---hhCCcEEEEcCCC--CC--ChhhHHHHHHHHHHc---CCEEEEe
Q 018231 173 YRLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (359)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~---~~~~k~v~l~~~n--~g--~~~~l~~i~~la~~~---~~~vivD 229 (359)
.+.+ +++.+|.+.+++.++ +..+..++++.++ .. +..+-.++.+.+.+. .++||+=
T Consensus 26 TPf~-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 91 (304)
T 3cpr_A 26 TPFT-ESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAG 91 (304)
T ss_dssp CCBC-TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred ccCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEec
Confidence 3455 568999999887664 3367888877443 22 344455666666543 4777754
No 367
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=20.23 E-value=2e+02 Score=22.41 Aligned_cols=13 Identities=15% Similarity=0.148 Sum_probs=5.9
Q ss_pred HHHHHHHHHHcCC
Q 018231 212 YERIRKVCNKQKA 224 (359)
Q Consensus 212 l~~i~~la~~~~~ 224 (359)
++++.+.+++.+.
T Consensus 88 l~~li~~~~~~~~ 100 (190)
T 1ivn_A 88 LRQILQDVKAANA 100 (190)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 4444444444443
No 368
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=20.13 E-value=1e+02 Score=28.28 Aligned_cols=51 Identities=2% Similarity=-0.020 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEecc
Q 018231 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 180 ~~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
...+.+++++.+... ..++.+.++..|.+.+..+|+++|+++|+.+..-+.
T Consensus 250 ~~~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 250 QTYTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp TCCSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred CcCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 345788999988885 777766677789899999999999999999876654
No 369
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=20.10 E-value=1.2e+02 Score=27.92 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=39.3
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEec
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD~ 230 (359)
..+.+++++.+......++.+.++..|.+.+..+|+++|+++|+.+++-+
T Consensus 264 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 264 LISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 44678888887764567777667668888899999999999999987653
No 370
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=20.03 E-value=1.2e+02 Score=27.58 Aligned_cols=49 Identities=4% Similarity=-0.039 Sum_probs=38.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcCCCCCChhhHHHHHHHHHHcCCEEEEe
Q 018231 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (359)
Q Consensus 181 ~~d~e~l~~~i~~~~~k~v~l~~~n~g~~~~l~~i~~la~~~~~~vivD 229 (359)
..+.+++++.+......++.+.++..|.+.+..+|+++|+++|+.++.-
T Consensus 252 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 300 (385)
T 3i6e_A 252 VYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGG 300 (385)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeC
Confidence 4567888888876456777776666788889999999999999998764
No 371
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=20.00 E-value=66 Score=31.49 Aligned_cols=25 Identities=12% Similarity=0.116 Sum_probs=21.9
Q ss_pred CChhhHHHHHHHHHHcCCEEEEecc
Q 018231 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (359)
Q Consensus 207 g~~~~l~~i~~la~~~~~~vivD~a 231 (359)
|+..+++++++-||++|+-||.|.+
T Consensus 190 Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 190 GRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3566799999999999999999976
Done!