RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 018231
(359 letters)
>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 470
Score = 365 bits (938), Expect = e-125
Identities = 193/305 (63%), Positives = 238/305 (78%), Gaps = 1/305 (0%)
Query: 18 TWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 77
+ + L PL+ D E+ DII+ E RQ GLELI SENF S +V++A+GS + NKYS G
Sbjct: 3 SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLG 62
Query: 78 YPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137
YPG RYYGG E+ID E+LCQKRAL+A+ LDP+ WGVNVQ SGSP+NF VYTAL++PH
Sbjct: 63 YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 122
Query: 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197
RIM LDLP GGHL+HG+ TD KKISA SIFFE+M Y++N TGYIDYD+LE++A LF PK
Sbjct: 123 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 182
Query: 198 LIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257
LI+AG S Y+R DY R+RK+ ++ A ++ADMAHISGLV AGV+PSPFE+ VVTTTTH
Sbjct: 183 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 242
Query: 258 KSLRGPRGAMIFFRKGVKEIN-KQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVAL 316
K+LRG R MIF+R+GV+ ++ K GKE+ Y+ E IN AVFPGLQGGPHNH I G+AVAL
Sbjct: 243 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 302
Query: 317 KQVCT 321
KQ T
Sbjct: 303 KQAMT 307
>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human
(Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 463
Score = 336 bits (863), Expect = e-114
Identities = 195/299 (65%), Positives = 240/299 (80%), Gaps = 1/299 (0%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
L DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RY
Sbjct: 5 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRY 64
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG E +D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LD
Sbjct: 65 YGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLD 124
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
LP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG
Sbjct: 125 LPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT 184
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG
Sbjct: 185 SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 244
Query: 264 RGAMIFFRKGVKEINKQ-GKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321
R +IF+RKGVK ++ + G+E+ Y +E++IN AVFP LQGGPHNH I +AVALKQ CT
Sbjct: 245 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT 303
>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 405
Score = 311 bits (798), Expect = e-104
Identities = 127/294 (43%), Positives = 180/294 (61%), Gaps = 23/294 (7%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L DP++ IE E+ RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG
Sbjct: 4 LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
EY+D+ E L ++RA + F + Q SG+ +N VY +L+ D ++ ++L H
Sbjct: 64 CEYVDIVEELARERAKQLFGAEHANV----QPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ + + + Y ++ T IDYD + + A L RPKLIVA ASAY
Sbjct: 120 GGHLTHG-----SPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAY 174
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+ + R++ ++ A ++ DMAHI+GLVAAG+ P+P YA VTTTTHK+LRGPRG
Sbjct: 175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234
Query: 267 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 320
MI + ++I++A+FPG+QGGP H I AVA +
Sbjct: 235 MILC--------------QEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEAL 274
>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia
coli [TaxId: 562]}
Length = 416
Score = 306 bits (785), Expect = e-102
Identities = 138/295 (46%), Positives = 186/295 (63%), Gaps = 21/295 (7%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+ D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG
Sbjct: 7 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGG 66
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L H
Sbjct: 67 CEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAH 122
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ + +PY ++ TG+IDY LEK A +PK+I+ G SAY
Sbjct: 123 GGHLTHG-----SPVNFSGKLYNIVPYGIDA-TGHIDYADLEKQAKEHKPKMIIGGFSAY 176
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
+ + D+ ++R++ + A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG
Sbjct: 177 SGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 236
Query: 267 MIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVCT 321
+I + G + + +K+N AVFPG QGGP H I G AVALK+
Sbjct: 237 LILAKGGSE-----------ELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAME 280
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain
{Lactobacillus sp., strain 30a [TaxId: 1591]}
Length = 462
Score = 108 bits (270), Expect = 6e-27
Identities = 36/312 (11%), Positives = 78/312 (25%), Gaps = 44/312 (14%)
Query: 46 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY-IDMAESL-------- 96
+K L+ S G K+ G ++G + D+ +
Sbjct: 4 FKSLKEYVSRYLIQFDCPGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLLI 63
Query: 97 -------CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 149
+K A + D S +N V +AL+ D ++ H
Sbjct: 64 HEGPAVAAEKHAARVYNADK----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSV 119
Query: 150 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK----------LI 199
+ + + + D ++ + A P+ +
Sbjct: 120 YNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAV 179
Query: 200 VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP----------SPFEYA 249
+ + +Y+ + K + D A + ++ P +
Sbjct: 180 IQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPG 239
Query: 250 DVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTI 309
+V + HK G +K ++ Y + N + + P
Sbjct: 240 IIVVQSVHKQQAGFSQTSQIHKKDSHI----KGQLRYCDHKHFNNSFNLFMSTSPFYPMY 295
Query: 310 TGLAVALKQVCT 321
L V
Sbjct: 296 AALDVNAAMQEG 307
>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase)
{Escherichia coli [TaxId: 562]}
Length = 467
Score = 107 bits (267), Expect = 2e-26
Identities = 35/287 (12%), Positives = 80/287 (27%), Gaps = 55/287 (19%)
Query: 67 GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVN--VQSLSGSPS 124
G+V + + G + G+ E+ + +G + + G +
Sbjct: 53 GAVTQSMQAAMMRGDEAFSGSRSYYALA--------ESVK---NIFGYQYTIPTHQGRGA 101
Query: 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS--------IFFETMPYRLN 176
L+K ++ LD S+ + T+ S ++ I
Sbjct: 102 EQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRY 161
Query: 177 ESTGYIDYDQLEKSATLFRPKLIV---------AGASAYARLYDYERIRKVCNKQKAIML 227
+ G D + LE+ P + + L + + + + K ++
Sbjct: 162 DFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVV 221
Query: 228 ADMAHISGLVAAGVIPSP--------------FEYADVVTTTTHKSLRGPRGAMIFFRKG 273
D A + ++YAD++ + K P G ++ +
Sbjct: 222 MDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDD 281
Query: 274 VKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQVC 320
+ + + +G P + G A+ V
Sbjct: 282 -----------SFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVG 317
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
{Proteus vulgaris [TaxId: 585]}
Length = 465
Score = 82.7 bits (203), Expect = 6e-18
Identities = 39/322 (12%), Positives = 87/322 (27%), Gaps = 53/322 (16%)
Query: 51 LIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106
L+PS + S A+ ++ G Y G+ + +A E F
Sbjct: 37 LLPSSAVYIDLLTDSGTNAMSDHQ---WAAMITGDEAYAGSRNYYDLK----DKAKELFN 89
Query: 107 LDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166
D + + G + ++ LLK + P H T
Sbjct: 90 YD-----YIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCK 144
Query: 167 FFETM------PYRLNESTGYIDYDQLEKSATLFRPKLI---------VAGASAYARLYD 211
+ ++ G D +L+++ I + + +
Sbjct: 145 AINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN 204
Query: 212 YERIRKVCNKQKAIMLADMAHISGLVAAG--------------VIPSPFEYADVVTTTTH 257
+ + ++ + ++ D A VI ++YAD +T +
Sbjct: 205 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAK 264
Query: 258 KSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALK 317
K G ++ R +E+F ++ GG + + L+
Sbjct: 265 KDPLLNIGGLVAIRD--------NEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLE 316
Query: 318 QVCTLITFSHIHVFSLHVYPAF 339
+ + ++
Sbjct: 317 EGTEEEYLHYRIGQVKYLGDRL 338
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola
[TaxId: 549]}
Length = 456
Score = 77.1 bits (189), Expect = 3e-16
Identities = 36/301 (11%), Positives = 78/301 (25%), Gaps = 60/301 (19%)
Query: 51 LIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106
L+ S++ + S A+ ++ G Y G+E E + +
Sbjct: 37 LLNSKDIYIDLLTDSGTNAMSDKQ---WAGMMIGDEAYAGSENFYHLE--------KTVK 85
Query: 107 LDPEKWGVN--VQSLSGSPSNFQVYTALLKPHDRIMA---LDLPHGGHLSHGYQTDTKKI 161
E +G V + G + + +KP + +G
Sbjct: 86 ---ELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNG-----ATF 137
Query: 162 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI---------VAGASAYARLYDY 212
+ G ID ++L + I + +
Sbjct: 138 VDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANM 197
Query: 213 ERIRKVCNKQKAIMLADMAHIS--------------GLVAAGVIPSPFEYADVVTTTTHK 258
+ ++ + + D + ++ F YAD T + K
Sbjct: 198 RAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKK 257
Query: 259 SLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQ 318
G + +E+F +E + GG + +A+ L++
Sbjct: 258 DCLVNIGGFLCMND---------EEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE 308
Query: 319 V 319
Sbjct: 309 A 309
>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS)
{Methanococcus maripaludis [TaxId: 39152]}
Length = 434
Score = 39.9 bits (92), Expect = 3e-04
Identities = 27/229 (11%), Positives = 58/229 (25%), Gaps = 20/229 (8%)
Query: 65 AVGSVMTNKYSEGYPGARYYGGNEYIDMA------ESLCQKRALEAFRLDPEKWGVNVQS 118
+ R + A +L K F+
Sbjct: 77 YSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVHAIATP 136
Query: 119 LSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178
+S S +A K + + + + SH +++ + L+
Sbjct: 137 ISTGMSISLCLSAARKKYGSNVVI----YPYASHKSPIKAVSFVGMNMRL--VETVLDGD 190
Query: 179 TGYIDYDQLEKSATLFRPK------LIVAGASAYARLYDYERIRKVCNKQKAIMLADMAH 232
Y+ + +E + L D I K+C + + A+
Sbjct: 191 RVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAY 250
Query: 233 ISGLVAAGVIPSPF--EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279
D V +++ K+L P G + + + I +
Sbjct: 251 AIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKE 299
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase
{Escherichia coli [TaxId: 562]}
Length = 401
Score = 34.4 bits (78), Expect = 0.019
Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 120 SGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179
S +N ++ LL D I++ L H + K+ + + + RL E+
Sbjct: 113 SCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAR 172
Query: 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 239
L + +F S + + + + + +K A+++ D +H G V
Sbjct: 173 EAGARHVLIATDGVF---------SMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGE 223
Query: 240 GVIPSPFEY-----ADVVTTTTHKSLRGPRGAMIFFRKGVKE 276
S D++T T K+L G G RK V E
Sbjct: 224 NGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVE 265
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS)
{Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Length = 335
Score = 28.3 bits (62), Expect = 1.6
Identities = 23/176 (13%), Positives = 47/176 (26%), Gaps = 37/176 (21%)
Query: 8 AVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVG 67
+ + W + ++ + + + + L PSE +
Sbjct: 187 EILGDLGKEIPWGEDID---TEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNK 243
Query: 68 SVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNF 126
+ + Y G G + + ++ L+PE + +++ G P
Sbjct: 244 PEICRAFDLEYRGVEISSGGQREHRHD--ILVEQIKEKGLNPESFEFYLKAFRYGMP--- 298
Query: 127 QVYTALLKPH-------DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175
PH +R++ D I V I F RL
Sbjct: 299 --------PHGGFGLGAERLIKQ------------MLDLPNIREV-ILFPRDRRRL 333
>d1h16a_ c.7.1.1 (A:) Pyruvate formate-lyase, PFL {Escherichia coli
[TaxId: 562]}
Length = 759
Score = 27.8 bits (62), Expect = 2.1
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 275 KEINKQGKEVFYDYEEKINQAVFPGLQG----GPHNHTITGL 312
+E++ K++F +Y + NQ VF + +TGL
Sbjct: 127 RELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGL 168
>d1neia_ d.253.1.1 (A:) Hypothetical protein YoaG {Escherichia
coli [TaxId: 562]}
Length = 60
Score = 24.9 bits (54), Expect = 3.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 15 NGVTWPKQLNAPLEVVDPEIA 35
NGV+ + P+ ++ PE+A
Sbjct: 15 NGVSVDYETETPMTLLVPEVA 35
>d1vqta1 c.1.2.3 (A:1-198) Orotidine 5'-monophosphate decarboxylase
(OMP decarboxylase) {Thermotoga maritima [TaxId: 2336]}
Length = 198
Score = 26.2 bits (57), Expect = 5.6
Identities = 4/17 (23%), Positives = 9/17 (52%)
Query: 271 RKGVKEINKQGKEVFYD 287
+K E+ K+ ++ D
Sbjct: 36 KKIFDELAKRNLKIILD 52
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.395
Gapped
Lambda K H
0.267 0.0454 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,359,364
Number of extensions: 62595
Number of successful extensions: 163
Number of sequences better than 10.0: 1
Number of HSP's gapped: 147
Number of HSP's successfully gapped: 17
Length of query: 359
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 273
Effective length of database: 1,226,816
Effective search space: 334920768
Effective search space used: 334920768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.9 bits)