Your job contains 1 sequence.
>018235
MVRSIKNPKKAKRKNKVAKKGDGSSSSSIPSLPTKVWQPGVDKLEEGEELQCDPTAYNSL
HAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRE
LVPNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHI
CASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI
TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH
IAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEIR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018235
(359 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 1108 2.9e-112 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 636 3.0e-62 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 445 3.7e-62 2
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 439 1.8e-58 2
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 432 1.6e-57 2
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 429 2.6e-57 2
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 579 3.3e-56 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 423 6.1e-56 2
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 419 1.3e-55 2
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 564 1.3e-54 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 556 8.9e-54 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 341 7.7e-48 2
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 443 8.4e-42 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 272 2.7e-36 2
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 383 1.9e-35 1
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 383 1.9e-35 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 242 4.7e-20 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 232 1.9e-18 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 229 9.6e-18 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 229 9.6e-18 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 229 9.6e-18 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 229 9.6e-18 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 229 9.6e-18 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 229 9.6e-18 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 229 9.6e-18 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 228 1.3e-17 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 228 1.3e-17 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 229 1.3e-17 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 229 1.3e-17 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 228 1.4e-17 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 227 1.6e-17 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 227 2.3e-17 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 227 2.3e-17 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 227 2.3e-17 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 227 2.3e-17 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 227 2.3e-17 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 227 2.3e-17 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 227 2.3e-17 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 227 2.3e-17 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 227 2.3e-17 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 227 2.7e-17 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 225 4.9e-17 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 225 5.0e-17 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 224 6.9e-17 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 224 6.9e-17 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 222 1.4e-16 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 217 6.9e-16 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 204 3.0e-14 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 200 9.4e-14 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 200 9.9e-14 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 200 1.0e-13 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 198 1.6e-13 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 198 1.8e-13 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 193 6.8e-13 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 193 6.8e-13 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 187 3.8e-12 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 176 3.0e-11 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 167 8.4e-10 1
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 156 1.4e-08 1
UNIPROTKB|B0W517 - symbol:CPIJ001500 "Ribosome biogenesis... 119 1.1e-07 2
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 146 1.4e-07 1
UNIPROTKB|Q17BB0 - symbol:AAEL005041 "Ribosome biogenesis... 119 2.2e-07 2
FB|FBgn0037569 - symbol:tex "tex" species:7227 "Drosophil... 142 3.1e-07 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 142 3.2e-07 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 142 3.6e-07 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 139 6.8e-07 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 136 7.9e-07 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 141 9.8e-07 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 138 1.1e-06 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 136 1.6e-06 1
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 139 1.6e-06 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 135 2.1e-06 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 135 2.3e-06 1
FB|FBgn0027518 - symbol:CG7609 species:7227 "Drosophila m... 139 3.1e-06 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 133 3.8e-06 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 133 4.1e-06 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 132 4.3e-06 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 132 4.6e-06 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 130 7.4e-06 1
UNIPROTKB|F1NIQ7 - symbol:CORO1C "Coronin" species:9031 "... 124 7.4e-06 1
UNIPROTKB|F1NIQ6 - symbol:CORO1C "Coronin" species:9031 "... 124 7.6e-06 1
UNIPROTKB|P93397 - symbol:P93397 "Guanine nucleotide-bind... 131 8.1e-06 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 132 1.0e-05 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 126 1.0e-05 2
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 131 1.1e-05 1
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 131 1.1e-05 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 131 1.2e-05 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 128 1.3e-05 1
ZFIN|ZDB-GENE-040808-14 - symbol:thoc3 "THO complex 3" sp... 128 1.3e-05 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 128 1.4e-05 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 128 1.4e-05 1
TAIR|locus:2100267 - symbol:AT3G01340 "AT3G01340" species... 127 1.4e-05 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 130 1.6e-05 1
UNIPROTKB|A2VDN8 - symbol:CORO1C "Coronin" species:9913 "... 129 2.0e-05 1
UNIPROTKB|F1Q1F6 - symbol:CORO1C "Coronin" species:9615 "... 129 2.0e-05 1
UNIPROTKB|Q9ULV4 - symbol:CORO1C "Coronin-1C" species:960... 129 2.0e-05 1
UNIPROTKB|A7MAP0 - symbol:CORO1C "Coronin" species:9606 "... 129 2.1e-05 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 126 2.1e-05 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 129 2.1e-05 1
UNIPROTKB|A8QB65 - symbol:Bm1_47965 "Ribosome biogenesis ... 128 2.3e-05 1
WARNING: Descriptions of 124 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 206/308 (66%), Positives = 235/308 (76%)
Query: 29 IPSLPTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPH 88
IPS+PT+VWQPGVD LE+GEELQCDP+AYNSLH FH+GWPCLSFDI+ D LGL R EFPH
Sbjct: 24 IPSIPTRVWQPGVDTLEDGEELQCDPSAYNSLHGFHVGWPCLSFDILGDKLGLNRTEFPH 83
Query: 89 TAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXXX 148
T Y VAGTQAEK + NSIG+FK++N+SGKRR++VP N
Sbjct: 84 TLYMVAGTQAEKAAHNSIGLFKITNVSGKRRDVVPKTFGNGEDEDEDDEDDSDSDDDDGD 143
Query: 149 XGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETI 208
S TP +Q+R+VAH GCVNRIRAM QN HIC SWAD+GHVQVWD+ SHLNALAESET
Sbjct: 144 EA-SKTPNIQVRRVAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETE 202
Query: 209 VGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVD 268
G V NQ+PLV F GHKDEGYAIDW+P T GRL++GDC S I+LWEPAS +W VD
Sbjct: 203 GKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPAS-GSWAVD 261
Query: 269 PNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
P PF GH+ASVEDLQWSP E +VFASCSVDG +A+WD R+GKS SFKAHNADVNVISW
Sbjct: 262 PIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISW 321
Query: 329 NRCWLAVC 336
NR LA C
Sbjct: 322 NR--LASC 327
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 131/298 (43%), Positives = 176/298 (59%)
Query: 33 PTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYF 92
P KVW+ GVD LEE E L D TAY+ +H+ + WPCLSF ++D LG RN++PHT Y
Sbjct: 68 PKKVWRAGVDPLEEDEVLDYDSTAYDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTMYL 127
Query: 93 VAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXXXXGGS 152
VAGTQA++ N + + K ++L K +
Sbjct: 128 VAGTQADEAKNNKVIIMKA-------KQLHKTKHDDEDSDDDEDSDDDEESDDEDDEDKD 180
Query: 153 GTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQG 212
P LQL + H G VNRIR+M Q +I A+W+D V +W++ +HL AL ++ET+
Sbjct: 181 VDPELQLAFINHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKAL-DNETV---- 235
Query: 213 APQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF 272
AP+ + +PL H EGYA+DW+P GRL TGDCN+ I++ AS++TW D F
Sbjct: 236 APKQT--APLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTN-ASESTWKTDTQAF 292
Query: 273 IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNR 330
GH+ SVED+QWSP+E VFASCS+D + IWD R K A+T KAH ADVNVISW+R
Sbjct: 293 KGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPKPAIT-VKAHTADVNVISWSR 349
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 445 (161.7 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 91/180 (50%), Positives = 108/180 (60%)
Query: 155 PILQLRKVAHQGCVNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGA 213
P + V HQGCVNR+RA N ASW++ G V +WDL L A+ E+ + Q
Sbjct: 150 PQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAV-ENAQLAKQY- 207
Query: 214 PQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI 273
+ S P+ FGGH+ EG+AIDW+P G L TGDC I++W P D TW VD P
Sbjct: 208 -EQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLA 266
Query: 274 GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG--KSA-LTSFKAHNADVNVISWNR 330
GHS SVEDLQWSP E V ASCSVD I IWD R K+ LT AH +DVNVISWNR
Sbjct: 267 GHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNR 326
Score = 208 (78.3 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 43/85 (50%), Positives = 54/85 (63%)
Query: 30 PSLPTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHT 89
P P +V+ PG KL + EEL CD +AY LH G PCLSFD++ D LG R FP T
Sbjct: 37 PKAPKEVYLPGT-KLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMT 95
Query: 90 AYFVAGTQAEKPSWNSIGVFKVSNI 114
AY VAGTQA + N++ V K+SN+
Sbjct: 96 AYIVAGTQASRAHVNNLIVMKMSNL 120
Score = 109 (43.4 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 32/125 (25%), Positives = 52/125 (41%)
Query: 207 TIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN 266
T V G +V +Q PL GH + W+P L + + I +W+ +
Sbjct: 251 TPVEDGTWKV-DQRPLA---GHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKA 306
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV--GKSALTSFKAHNADVN 324
H + V + W+ EP + AS DG++ IWD R K + +FK H +
Sbjct: 307 CMLTCEDAHQSDVNVISWNRNEPFI-ASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHIT 365
Query: 325 VISWN 329
+ W+
Sbjct: 366 TVEWS 370
Score = 90 (36.7 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT 287
H+ + I WN + +G + +++W+ + F H+ + ++WSP
Sbjct: 315 HQSDVNVISWNR-NEPFIASGGDDGYLHIWDLRQFQSKKPIAT-FKHHTDHITTVEWSPA 372
Query: 288 EPDVFASCSVDGHIAIWDTRVGKSALTSFK-AHNADV 323
E V AS D IA+WD V K + A N DV
Sbjct: 373 EATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDV 409
Score = 74 (31.1 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 28/101 (27%), Positives = 41/101 (40%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPA--SDATWNVDP--N 270
Q ++ P+ F H D ++W+P L +G + I LW+ A D VDP N
Sbjct: 347 QFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQN 406
Query: 271 -------P----FIGHSAS-VEDLQWSPTEPDVFASCSVDG 299
P FI +++L W P P V S + G
Sbjct: 407 EDVLNKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSG 447
Score = 68 (29.0 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLR 196
AHQ VN I P I AS D G++ +WDLR
Sbjct: 314 AHQSDVNVISWNRNEPFI-ASGGDDGYLHIWDLR 346
Score = 41 (19.5 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 180 ICASWADTGHVQVWDLRSHLN---AL--AESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234
+ AS D + +WDL + A+ A++E ++ + PQ+ L G K E
Sbjct: 376 VLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQL-----LFIHQGQK-EIKE 429
Query: 235 IDWNPITTGRLVT 247
+ W+P G L++
Sbjct: 430 LHWHPQLPGVLLS 442
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 439 (159.6 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 83/181 (45%), Positives = 111/181 (61%)
Query: 155 PILQLRKVAHQGCVNRIRA--MTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQG 212
P L+L V H G +NR+R + + P + W++ G V+V+ LR L + E + +
Sbjct: 139 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVEEPQALAAFL 197
Query: 213 APQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF 272
+ + P+ F GH EG+A+DW+P TGRL+TGDC I+LW P +W+VD PF
Sbjct: 198 RDEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 257
Query: 273 IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA---LTSFKAHNADVNVISWN 329
+GH+ SVEDLQWSPTE VFASCS D I IWD R S LT+ AH+ DVNVISW+
Sbjct: 258 VGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWS 317
Query: 330 R 330
R
Sbjct: 318 R 318
Score = 179 (68.1 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 41/87 (47%), Positives = 49/87 (56%)
Query: 33 PTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAY 91
P +V+ PG L EGEEL D AY H G PCLSFDIVRD LG R E P T Y
Sbjct: 29 PAQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLY 88
Query: 92 FVAGTQAEKPSWNSIGVFKVSNISGKR 118
AGTQAE N + + ++ N+ G +
Sbjct: 89 LCAGTQAESAQSNRLMMLRMHNLHGTK 115
Score = 104 (41.7 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 27/107 (25%), Positives = 44/107 (41%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
F GH + W+P + ++ I +W+ + + H V + W
Sbjct: 257 FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISW 316
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNVISWN 329
S EP + + DG + IWD R KS + +FK H A V + W+
Sbjct: 317 SRREPFLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWH 362
Score = 73 (30.8 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT 287
H + I W+ L GD + + +W+ + + F H A V ++W P
Sbjct: 307 HDGDVNVISWSRREPFLLSGGD-DGALKIWDLRQFKSGSPVAT-FKQHVAPVTSVEWHPQ 364
Query: 288 EPDVFASCSVDGHIAIWDTRV 308
+ VFA+ D I WD V
Sbjct: 365 DSGVFAASGADHQITQWDLAV 385
Score = 61 (26.5 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLR 196
AH G VN I + P + S D G +++WDLR
Sbjct: 306 AHDGDVNVISWSRREPFLL-SGGDDGALKIWDLR 338
Score = 59 (25.8 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 21/99 (21%), Positives = 39/99 (39%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA---TWNVDPNP 271
Q + SP+ F H +++W+P +G + I W+ A + +V+ +P
Sbjct: 339 QFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVEADP 398
Query: 272 FIG---------HSASVE--DLQWSPTEPDVFASCSVDG 299
+ H E +L W P P + S ++ G
Sbjct: 399 GLADLPQQLLFVHQGETELKELHWHPQCPGLLVSTALSG 437
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 432 (157.1 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 83/181 (45%), Positives = 112/181 (61%)
Query: 155 PILQLRKVAHQGCVNRIRA--MTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQG 212
P L+L V H G +NR+R + + P + W++ G V+V+ LR L + + + +
Sbjct: 138 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALAIFL 196
Query: 213 APQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF 272
+ + P+ F GH EG+A+DW+P GRL+TGDC I+LW P +WNVD PF
Sbjct: 197 RDEQARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPF 256
Query: 273 IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV--GKSA-LTSFKAHNADVNVISWN 329
+GH+ SVEDLQWSPTE VFASCS D I IWD R GK+ LT+ AH+ DVNVISW+
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWS 316
Query: 330 R 330
R
Sbjct: 317 R 317
Score = 177 (67.4 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 41/87 (47%), Positives = 50/87 (57%)
Query: 33 PTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAY 91
P++V+ PG L EGEEL D AY H G PCLSFDIVRD LG R E P + Y
Sbjct: 29 PSQVYLPGRGPPLGEGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLSLY 88
Query: 92 FVAGTQAEKPSWNSIGVFKVSNISGKR 118
AGTQAE N + + ++ N+ G R
Sbjct: 89 LCAGTQAESAQSNRLMMLRMHNLHGTR 115
Score = 99 (39.9 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 26/107 (24%), Positives = 43/107 (40%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
F GH + W+P + ++ I +W+ + H V + W
Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISW 315
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNVISWN 329
S EP + + DG + +WD R KS + +FK H A V + W+
Sbjct: 316 SRREPFLLSGGD-DGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWH 361
Score = 74 (31.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 22/87 (25%), Positives = 34/87 (39%)
Query: 222 LVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
L H + I W+ L GD + + +W+ + + F H A V
Sbjct: 300 LTTAAAHDGDVNVISWSRREPFLLSGGD-DGTLKVWDLRQFKSGSPVAT-FKQHVAPVTS 357
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRV 308
++W P + VFA+ D I WD V
Sbjct: 358 VEWHPQDSGVFAASGADNQITQWDLAV 384
Score = 65 (27.9 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 32/133 (24%), Positives = 52/133 (39%)
Query: 185 ADTGHVQV--WDLRS-HLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241
A G V V W R L + + T+ Q + SP+ F H +++W+P
Sbjct: 305 AHDGDVNVISWSRREPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQD 364
Query: 242 TGRLVTGDCNSCIYLWE------PASDATWNVDPN----P----FIGHSAS-VEDLQWSP 286
+G ++ I W+ P S T DP P F+ + +++L W P
Sbjct: 365 SGVFAASGADNQITQWDLAVERDPESGET-ETDPGLAALPQQLLFVHQGETDLKELHWHP 423
Query: 287 TEPDVFASCSVDG 299
P V S ++ G
Sbjct: 424 QCPGVLISTALSG 436
Score = 62 (26.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLR 196
AH G VN I + P + S D G ++VWDLR
Sbjct: 305 AHDGDVNVISWSRREPFLL-SGGDDGTLKVWDLR 337
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 429 (156.1 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 82/181 (45%), Positives = 110/181 (60%)
Query: 155 PILQLRKVAHQGCVNRIRA--MTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQG 212
P L+L V H G +NR+R + + P + W++ G V+V+ LR L + + + +
Sbjct: 138 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALATFL 196
Query: 213 APQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF 272
+ + P+ F GH EG+A+DW+P GRL+TGDC I+LW P +W+VD PF
Sbjct: 197 RDEQARVKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPF 256
Query: 273 IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA---LTSFKAHNADVNVISWN 329
+GH+ SVEDLQWSPTE VFASCS D I IWD R S LT+ AHN DVNVISW+
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWS 316
Query: 330 R 330
R
Sbjct: 317 R 317
Score = 178 (67.7 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 41/87 (47%), Positives = 49/87 (56%)
Query: 33 PTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAY 91
P +V+ PG L EGEEL D AY H G PCLSFDIVRD LG R E P T Y
Sbjct: 29 PPQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLY 88
Query: 92 FVAGTQAEKPSWNSIGVFKVSNISGKR 118
AGTQAE N + + ++ N+ G +
Sbjct: 89 LCAGTQAESAQSNRLMMLRMHNLHGTK 115
Score = 104 (41.7 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 28/108 (25%), Positives = 48/108 (44%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNVDPNPFIGHSASVEDLQ 283
F GH + W+P + ++ I +W+ A+ + + P H+ V +
Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTP-AAHNGDVNVIS 314
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNVISWN 329
WS EP + + DG + +WD R KS + +FK H A V + W+
Sbjct: 315 WSRQEPFLLSGGD-DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWH 361
Score = 75 (31.5 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT 287
H + I W+ L GD + + +W+ + + F H A V ++W P
Sbjct: 306 HNGDVNVISWSRQEPFLLSGGD-DGALKVWDLRQFKSGSPVAT-FKQHVAPVTSVEWHPQ 363
Query: 288 EPDVFASCSVDGHIAIWDTRV 308
+ VFA+ D I WD V
Sbjct: 364 DSGVFAASGADNQITQWDLAV 384
Score = 66 (28.3 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLR 196
AH G VN I Q P + S D G ++VWDLR
Sbjct: 305 AHNGDVNVISWSRQEPFLL-SGGDDGALKVWDLR 337
Score = 60 (26.2 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 21/99 (21%), Positives = 40/99 (40%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA---TWNVDPNP 271
Q + SP+ F H +++W+P +G ++ I W+ A + + + +P
Sbjct: 338 QFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDTETDP 397
Query: 272 -FIG--------HSASVE--DLQWSPTEPDVFASCSVDG 299
+G H + +L W P P V S ++ G
Sbjct: 398 GLVGLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSG 436
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 123/298 (41%), Positives = 166/298 (55%)
Query: 35 KVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVA 94
KV+ PG+ L+ GEEL+ D +AY H G PCLSFD+V D G R +FP + A
Sbjct: 42 KVYVPGLQPLQPGEELEMDHSAYRMYHECQTGAPCLSFDVVLDGEGDRREQFPLSMVLCA 101
Query: 95 GTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXXXXGGSGT 154
GTQA+ N + V ++ N+ G ++ +K S+
Sbjct: 102 GTQADTALSNRLIVMRMHNLQGTEKKKDEDKSSDEESDEDEDDEDEDKK----------- 150
Query: 155 PILQLRKVAHQGCVNRIRAMTQNPH-ICASWADTGHVQVWDLRSHLNALAESETIVGQGA 213
P L+L + H G +NR+R + + A W++ G V+++DLR L A+ S T +
Sbjct: 151 PQLELAMMPHYGGINRVRVTQRGEQTLAAVWSEKGQVEIFDLRLQLEAVHNS-TAMSAFI 209
Query: 214 PQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI 273
Q +PL F GH EG+AIDW+P GR+V+GDC I++WEP TW +D PF
Sbjct: 210 KQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQRPFS 269
Query: 274 GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG-KSALTSFKAHNADVNVISWNR 330
HS SVEDLQWSPTE VFASCSVD I IWD R S L++ +AH++DVNVISWNR
Sbjct: 270 SHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNR 327
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
F H + W+P + + I +W+ + + N HS+ V + W
Sbjct: 268 FSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANE--AHSSDVNVISW 325
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNVISWN 329
+ TEP + + DG + +WD R +S + SFK H+A V + W+
Sbjct: 326 NRTEPFILSGGD-DGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWS 371
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 423 (154.0 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 80/181 (44%), Positives = 111/181 (61%)
Query: 155 PILQLRKVAHQGCVNRIRA--MTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQG 212
P L+L V H G +NR+R + + P + W++ G V+V+ LR L + + + +
Sbjct: 133 PQLELAMVPHYGGINRVRVSWLGEEP-VAGIWSEKGQVEVFALRRLLQVVDDPQALATFL 191
Query: 213 APQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF 272
+ + P+ F GH EG+A+DW+P +GRL+TGDC I+LW P +W+VD PF
Sbjct: 192 RDEQARVKPIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 251
Query: 273 IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA---LTSFKAHNADVNVISWN 329
+GH+ SVEDLQWSPTE VFASCS D I IWD R S LT+ AH+ DVNVI+W+
Sbjct: 252 MGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWS 311
Query: 330 R 330
R
Sbjct: 312 R 312
Score = 171 (65.3 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 39/84 (46%), Positives = 48/84 (57%)
Query: 34 TKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYF 92
++V+ PG L EGEEL D AY H G PCLSFDI+RD LG R E P T Y
Sbjct: 25 SQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIIRDHLGDNRTELPLTLYL 84
Query: 93 VAGTQAEKPSWNSIGVFKVSNISG 116
AGTQAE N + + ++ N+ G
Sbjct: 85 CAGTQAESAQSNRLMMLRMHNLHG 108
Score = 101 (40.6 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 26/107 (24%), Positives = 44/107 (41%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
F GH + W+P + ++ I +W+ + + H V + W
Sbjct: 251 FMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINW 310
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNVISWN 329
S EP + + DG + IWD R KS + +FK H A + + W+
Sbjct: 311 SRREPFLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPITSVEWH 356
Score = 78 (32.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 36/151 (23%), Positives = 59/151 (39%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222
AH G VN I + P + S D G +++WDLR Q + SP+
Sbjct: 300 AHDGDVNVINWSRREPFLL-SGGDDGALKIWDLR------------------QFKSGSPV 340
Query: 223 VKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASD-----ATWNVDPN----P-- 271
F H +++W+P +G ++ I W+ A + DP P
Sbjct: 341 ATFKQHVAPITSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDTETDPGLADLPQQ 400
Query: 272 --FIGHSAS-VEDLQWSPTEPDVFASCSVDG 299
F+ + +++L W P P V S ++ G
Sbjct: 401 LLFVHQGETDLKELHWHPQCPGVLVSTALSG 431
Score = 77 (32.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 24/98 (24%), Positives = 39/98 (39%)
Query: 211 QGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
+ AP S L H + I+W+ L GD + + +W+ + +
Sbjct: 286 RAAP--SKACMLTTTSAHDGDVNVINWSRREPFLLSGGD-DGALKIWDLRQFKSGSPVAT 342
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308
F H A + ++W P + VFA+ D I WD V
Sbjct: 343 -FKQHVAPITSVEWHPQDSGVFAASGADNQITQWDLAV 379
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 419 (152.6 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 79/180 (43%), Positives = 109/180 (60%)
Query: 155 PILQLRKVAHQGCVNRIRA--MTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQG 212
P L+L V H G +NR+R + + P + W++ G V+V+ LR L + + + +
Sbjct: 139 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALATFL 197
Query: 213 APQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF 272
+ + P+ F GH EG+A+DW+P GRL+TGDC I+LW P +W+VD PF
Sbjct: 198 RDEQTRMKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 257
Query: 273 IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA---LTSFKAHNADVNVISWN 329
+GH+ SVEDLQWSPTE VFASCS D I IWD R S LT+ AH+ DVNVI+W+
Sbjct: 258 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS 317
Score = 172 (65.6 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 40/85 (47%), Positives = 48/85 (56%)
Query: 35 KVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFV 93
+V+ PG L EGEEL D AY H G PCLSFDIVRD LG R E P T Y
Sbjct: 31 QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90
Query: 94 AGTQAEKPSWNSIGVFKVSNISGKR 118
AGTQAE N + + ++ N+ G +
Sbjct: 91 AGTQAESSQSNRLMMLRMHNLHGTK 115
Score = 102 (41.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 26/107 (24%), Positives = 44/107 (41%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
F GH + W+P + ++ I +W+ + + H V + W
Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINW 316
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNVISWN 329
S EP + + DG + +WD R KS + +FK H A V + W+
Sbjct: 317 SHREPFLLSGGD-DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWH 362
Score = 75 (31.5 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 21/81 (25%), Positives = 34/81 (41%)
Query: 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT 287
H + I+W+ L GD + + +W+ + + F H A V ++W P
Sbjct: 307 HDGDVNVINWSHREPFLLSGGD-DGALKVWDLRQFKSGSPVAT-FKQHVAPVTSVEWHPQ 364
Query: 288 EPDVFASCSVDGHIAIWDTRV 308
+ VFA+ D I WD V
Sbjct: 365 DSGVFAASGADNQITQWDLAV 385
Score = 62 (26.9 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLR 196
AH G VN I + P + S D G ++VWDLR
Sbjct: 306 AHDGDVNVINWSHREPFLL-SGGDDGALKVWDLR 338
Score = 61 (26.5 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 25/101 (24%), Positives = 42/101 (41%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE------P-ASDATWNV 267
Q + SP+ F H +++W+P +G ++ I W+ P A DA
Sbjct: 339 QFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDA--ET 396
Query: 268 DPN----P----FIGHSAS-VEDLQWSPTEPDVFASCSVDG 299
DP P F+ + +++L W P P V S ++ G
Sbjct: 397 DPGLADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSG 437
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 125/304 (41%), Positives = 167/304 (54%)
Query: 33 PTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAY 91
P++V+ PG L EGEEL D AY H G PCLSFDIVRD LG R E P + Y
Sbjct: 29 PSQVYLPGRGPPLSEGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLSLY 88
Query: 92 FVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXXXXGG 151
AGTQAE N + + ++ N+ G R P++ S+
Sbjct: 89 LCAGTQAESAQSNRLMMLRMHNLHGTRPS--PSEGSDDDEEDEDEEDEEEQK-------- 138
Query: 152 SGTPILQLRKVAHQGCVNRIRA--MTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
P L+L V H G +NR+R + + P + W++ G V+V+ LR L + + + +
Sbjct: 139 ---PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALA 194
Query: 210 GQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP 269
+ + P+ F GH EG+A+DW+P GRL+TGDC ++LW P +WNVD
Sbjct: 195 IFLRDEQARIKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQ 254
Query: 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV--GKSA-LTSFKAHNADVNVI 326
PF+GH+ SVEDLQWSPTE VFASCS D I IWD R GK+ LT+ AH+ DVNVI
Sbjct: 255 RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVI 314
Query: 327 SWNR 330
SW+R
Sbjct: 315 SWSR 318
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 123/308 (39%), Positives = 163/308 (52%)
Query: 29 IPSLPTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFP 87
+P + + PG+ + L++GEEL DP+AY H+F+ WPCLSFD+V+D LG R +FP
Sbjct: 35 VPENQRQAYIPGLSRPLKKGEELDFDPSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFP 94
Query: 88 HTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXX 147
Y V+GTQA+KP N I V + N++ R+E NK +
Sbjct: 95 AECYIVSGTQADKPRDNEIIVMGLKNLTTMRKEK-ENKGDDSDTSEDESEDEDAEEEKKR 153
Query: 148 XXGGSGTPILQLRKVAHQGCVNRIRA-MTQNPHICASWADTGHVQVWDLRSHLNALAESE 206
P + + H G +NRIR+ + +CA W+D G VQVW++ LN +
Sbjct: 154 E------PKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALNY---TH 204
Query: 207 TIVGQGAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATW 265
+ G+ +V PL G EGY + W+ + TG L TGD IYLW+ W
Sbjct: 205 GMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQW 264
Query: 266 NVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG-KSAL--TSFKAHNAD 322
V NP GH SVEDL WSPTE + ASCS DG I +WDTR K A T KAH +D
Sbjct: 265 AVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESD 324
Query: 323 VNVISWNR 330
VNVISWNR
Sbjct: 325 VNVISWNR 332
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 341 (125.1 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 76/183 (41%), Positives = 108/183 (59%)
Query: 155 PILQLRKVAHQGCVNRIR-----AMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
PIL+ + ++ +G NR+R A + + AS+ +TG V +WD+ HL +L +V
Sbjct: 172 PILEHKSISTKGACNRVRSARRPANSSKESLLASFHETGKVHIWDIAPHLRSLDSPGVMV 231
Query: 210 GQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP 269
+ SPL HK EGYA+DW+P L++GD + I+L + S+ W D
Sbjct: 232 SR-----KENSPLYTVNRHKTEGYALDWSPFEYS-LLSGDNANEIFLTK-YSNGGWQTDS 284
Query: 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK--SALTSFKAH-NADVNVI 326
+PF+ H+A+VEDLQWSP+E +VF+SCS DG IWD R + SALT AH DVNV+
Sbjct: 285 SPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALT-VNAHPGVDVNVL 343
Query: 327 SWN 329
SWN
Sbjct: 344 SWN 346
Score = 176 (67.0 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 33 PTKV-WQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAY 91
P+K+ W PG K+ E+L DP+ Y LH + WP LSFDI++D+LG R +PH Y
Sbjct: 70 PSKIPWLPG-GKINADEKLVADPSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMY 128
Query: 92 FVAGTQAEKPSWNSIGVFKVSNI 114
V G+QA + N + V K+S +
Sbjct: 129 LVGGSQALDSNDNELTVMKLSQL 151
Score = 91 (37.1 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 32/98 (32%), Positives = 47/98 (47%)
Query: 163 AHQGC-VNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP 221
AH G VN + T+ P++ A+ AD G VWDLRS L S ++ +P
Sbjct: 334 AHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRS----LKSSSSVA----------TP 379
Query: 222 LVKFGGHKDEGYAIDWNPITTGRL-VTGDCNSCIYLWE 258
+ F H+ Y+I+W+P + V G N I LW+
Sbjct: 380 VASFKWHRAPIYSIEWHPNEDSVIGVVGADNQ-ISLWD 416
Score = 88 (36.0 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNP---FIGHSASVEDLQWSPTEPDV 291
+ WN L TG N +W+ S + + P F H A + ++W P E V
Sbjct: 343 LSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSV 402
Query: 292 FASCSVDGHIAIWDTRV 308
D I++WD V
Sbjct: 403 IGVVGADNQISLWDLSV 419
Score = 87 (35.7 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 25/102 (24%), Positives = 46/102 (45%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPAS-DATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293
+ W+P + C+ +W+ + T + N G +V L W+ P++ A
Sbjct: 297 LQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNV--LSWNTRVPNLLA 354
Query: 294 SCSVDGHIAIWDTRVGKSA------LTSFKAHNADVNVISWN 329
+ + +G ++WD R KS+ + SFK H A + I W+
Sbjct: 355 TGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWH 396
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 109/296 (36%), Positives = 148/296 (50%)
Query: 39 PGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQA 98
PG KL GE L DP+ Y+ LH WPCLSFDIVRDTLG R +P T Y V GTQA
Sbjct: 78 PGRTKLAPGEVLSPDPSTYDMLHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYAVTGTQA 137
Query: 99 E--KPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXXXXGGSGTPI 156
E + N + V K+S + RE N+ + G +
Sbjct: 138 EGRRAKENELMVLKLSGLGKMERE---NETDSESDSDDDEGGEAILEHKSIPLGSTAN-- 192
Query: 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQV 216
++R AHQ + I Q I A+ + V + D+ HL + T++ P
Sbjct: 193 -RIR--AHQTPQSDITKPPQT--ITATMLENSQVVIHDVTPHLTSFDVPGTML---PPSA 244
Query: 217 SNQSPLVKFGGHKDEGYAIDWNPI-TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGH 275
S PL HK EGYA+DW+P+ G+L+TGD + IY+ W D F GH
Sbjct: 245 SK--PLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFRGH 302
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV-GKSALTSFKAHNADVNVISWNR 330
++SVE+LQWSP E +VFAS S DG + +WD R +S + K N DVNV++W++
Sbjct: 303 ASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSK 358
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 272 (100.8 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 64/183 (34%), Positives = 101/183 (55%)
Query: 155 PILQLRKVAHQGCVNRIR----AMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVG 210
P+++ + + NR++ A++ + A+ ++ G V +++L A + G
Sbjct: 199 PVIENENIPLRDTTNRLKVSPFAISNQEVLTATMSENGDVYIYNLAPQSKAFSTP----G 254
Query: 211 QGAPQVSNQSPLVKFGGHKD-EGYAIDWNP-ITTGRLVTGDCNSCIYLWEPASDATWNVD 268
P+ S + P+ H + EGY +DW+P I TG L++GDC+ IY + + + W D
Sbjct: 255 YQIPK-SAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSGDCSGQIYFTQRHT-SRWVTD 312
Query: 269 PNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVI 326
PF + ++ S+ED+QWS TE VFA+ DG+I IWDTR K S KA N DVNVI
Sbjct: 313 KQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVI 372
Query: 327 SWN 329
SW+
Sbjct: 373 SWS 375
Score = 147 (56.8 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 35 KVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFV 93
+++ P + + L E L+ DPT Y LH ++ WPCL+ D++ DTLG R +P +
Sbjct: 95 ELYLPHMSRPLGPDEVLEADPTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLT 154
Query: 94 AGTQAEKPSWNSIGVFKVSNIS 115
TQ+ + N + V +SN++
Sbjct: 155 TATQSSRKKENELMVLALSNLA 176
Score = 74 (31.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 37/154 (24%), Positives = 62/154 (40%)
Query: 168 VNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG 227
VN I + ++ AS D G VWDLR + A+ A Q P+ ++
Sbjct: 369 VNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNAD--------AVQ-----PVAQYDF 415
Query: 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA-----------TWNVDPNP----F 272
HK +I +NP+ + G ++ + LW+ + +A T + P F
Sbjct: 416 HKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPPQLLF 475
Query: 273 IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306
+ V+D++W P S DG + +W T
Sbjct: 476 VHWQKEVKDVKWHKQIPGCLVSTGTDG-LNVWKT 508
Score = 66 (28.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 19/92 (20%), Positives = 35/92 (38%)
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP-NP---FIGHS 276
P + + I W+ L +GD N +W+ N D P + H
Sbjct: 358 PAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHK 417
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308
++ + ++P + + A S D + +WD V
Sbjct: 418 GAITSIAFNPLDESIVAVGSEDNTVTLWDLSV 449
Score = 53 (23.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS--P 221
H+G + I + I A ++ V +WDL + A+ E I Q A Q P
Sbjct: 416 HKGAITSIAFNPLDESIVAVGSEDNTVTLWDL----SVEADDEEIKQQAAETKELQEIPP 471
Query: 222 LVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS 261
+ F + E + W+ G LV+ + + +W+ S
Sbjct: 472 QLLFVHWQKEVKDVKWHKQIPGCLVSTGTDG-LNVWKTIS 510
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 102/304 (33%), Positives = 148/304 (48%)
Query: 34 TKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYF 92
+ ++ P K L E L+ DPT Y LH ++ WPCL+ DI+ D+LG R +P T Y
Sbjct: 99 SSIYLPHKSKPLGPDEVLEADPTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYL 158
Query: 93 VAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXXXXGGS 152
TQA K N + K S+++ + LV K N
Sbjct: 159 ATATQAAKAKDNELLAMKASSLA---KTLV--KDENEEDEEDEDDDDDV----------D 203
Query: 153 GTPILQLRKVAHQGCVNRIR----AMTQNPHICASWADTGHVQVWDLRSHLNALAESETI 208
PIL + + NRIR A ++ AS ++ G V ++DL + A +T
Sbjct: 204 SDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASMSENGEVYIFDLSAQYKAF---DT- 259
Query: 209 VGQGAPQVSNQSPLVKFGGHKD-EGYAIDWNP-ITTGRLVTGDCNSCIYLWEPASDATWN 266
G P+ S++ P+ H + EGY +DW+P + TG L++GD + IYL + ++W
Sbjct: 260 PGYMIPK-SSKRPIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTT-SSWT 317
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNV 325
D PF +S+ED+QWS E VFA+ DG+I IWDTR K S A +DVNV
Sbjct: 318 TDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNV 377
Query: 326 ISWN 329
ISW+
Sbjct: 378 ISWS 381
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 102/304 (33%), Positives = 148/304 (48%)
Query: 34 TKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYF 92
+ ++ P K L E L+ DPT Y LH ++ WPCL+ DI+ D+LG R +P T Y
Sbjct: 99 SSIYLPHKSKPLGPDEVLEADPTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYL 158
Query: 93 VAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNXXXXXXXXXXXXXXXXXXXXXGGS 152
TQA K N + K S+++ + LV K N
Sbjct: 159 ATATQAAKAKDNELLAMKASSLA---KTLV--KDENEEDEEDEDDDDDV----------D 203
Query: 153 GTPILQLRKVAHQGCVNRIR----AMTQNPHICASWADTGHVQVWDLRSHLNALAESETI 208
PIL + + NRIR A ++ AS ++ G V ++DL + A +T
Sbjct: 204 SDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASMSENGEVYIFDLSAQYKAF---DT- 259
Query: 209 VGQGAPQVSNQSPLVKFGGHKD-EGYAIDWNP-ITTGRLVTGDCNSCIYLWEPASDATWN 266
G P+ S++ P+ H + EGY +DW+P + TG L++GD + IYL + ++W
Sbjct: 260 PGYMIPK-SSKRPIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTT-SSWT 317
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNV 325
D PF +S+ED+QWS E VFA+ DG+I IWDTR K S A +DVNV
Sbjct: 318 TDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNV 377
Query: 326 ISWN 329
ISW+
Sbjct: 378 ISWS 381
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 242 (90.2 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 60/174 (34%), Positives = 88/174 (50%)
Query: 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSN 218
++K+ H+G VNR R M QN I A+ + V ++D H L + P
Sbjct: 115 IQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKH--PL--------EPTPD-GK 163
Query: 219 QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE--PASDATWNVDP-NPFIGH 275
SP +K GHK EGY I WNP G L++ + I +W+ AS + +D N + GH
Sbjct: 164 CSPNLKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGH 223
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
++ VED+ W F S D + IWDTR G + +AHN++VN +S+N
Sbjct: 224 TSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFN 277
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 232 (86.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 60/175 (34%), Positives = 86/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H G VNR R M QNP I A+ T V V+D H P S +
Sbjct: 120 KITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 229 (85.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 229 (85.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 229 (85.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 229 (85.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 229 (85.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 229 (85.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 229 (85.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 228 (85.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 59/175 (33%), Positives = 86/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNPHI A+ + V V+D H P S +
Sbjct: 110 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH------------PAKPDPSGEC 157
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WN +G L++ + + LW+ + VD F GHS
Sbjct: 158 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 217
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN 272
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 228 (85.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 59/175 (33%), Positives = 86/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNPHI A+ + V V+D H P S +
Sbjct: 110 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH------------PAKPDPSGEC 157
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WN +G L++ + + LW+ + VD F GHS
Sbjct: 158 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 217
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN 272
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 152 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 200
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 201 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 259
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 260 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 319
Query: 324 NVISWN 329
N +S+N
Sbjct: 320 NCLSFN 325
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/186 (33%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 152 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 200
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 201 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 259
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 260 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 319
Query: 324 NVISWN 329
N +S+N
Sbjct: 320 NCLSFN 325
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 228 (85.3 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 60/175 (34%), Positives = 84/175 (48%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ T V +D H P S
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKH------------PSKPDPSGDC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
SP ++ GH+ EGY + WNP +G L++ + I LW+ + VD F GH+
Sbjct: 168 SPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 227 (85.0 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 85 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 132
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 133 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 192
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 193 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 247
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 227 (85.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 227 (85.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 60/175 (34%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ T V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 TPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFN 282
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 225 (84.3 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 61/186 (32%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNP+I A+ + V V+D H
Sbjct: 107 GSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKH----------- 155
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN G L++ + + LW+ ++
Sbjct: 156 -PSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKI 214
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADV 323
VD F GHSA VED+ W +F S + D + IWDTR ++ S AH A+V
Sbjct: 215 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEV 274
Query: 324 NVISWN 329
N +S+N
Sbjct: 275 NCLSFN 280
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 225 (84.3 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 61/186 (32%), Positives = 91/186 (48%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 108 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKH----------- 156
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-- 266
P S + +P ++ GH+ EGY + WN +G L++ + + LW+ +
Sbjct: 157 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
Query: 267 VDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF--KAHNADV 323
VD F GHSA VED+ W +F S + D + +WDTR ++ S AH A+V
Sbjct: 216 VDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEV 275
Query: 324 NVISWN 329
N +S+N
Sbjct: 276 NCLSFN 281
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 224 (83.9 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 59/175 (33%), Positives = 87/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKH------------PSKPDPSGEC 167
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
+P ++ GH+ EGY + WNP +G L++ + I LW+ ++ VD F GH+
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 224 (83.9 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 59/175 (33%), Positives = 86/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S +
Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKH------------PSKPDPSGEC 166
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
SP ++ GH+ EGY + WN +G L++ + + LW+ ++ VD F GHS
Sbjct: 167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHS 226
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFN 281
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 222 (83.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 59/175 (33%), Positives = 85/175 (48%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QNP I A+ + V V+D H P S
Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKH------------PSKPDPSGDC 166
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FIGHS 276
SP ++ GH+ EGY + WN +G L++ + + LW+ ++ VD F GHS
Sbjct: 167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHS 226
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFN 281
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 217 (81.4 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 59/175 (33%), Positives = 86/175 (49%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ- 219
K+ H+G VNR R M QN + A+ + V V+D H P+ S +
Sbjct: 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKH------------PSKPEPSGEC 171
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DP-NPFIGHS 276
P ++ GH+ EGY + WNP G L++ + I LW+ A+ V D N F GH+
Sbjct: 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT 231
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N
Sbjct: 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 222 LVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS----DATWNVDPNP----FI 273
L F HKDE + + W+P L + + +++W+ + +T + + P FI
Sbjct: 314 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 373
Query: 274 --GHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
GH+A + D W+P EP + S S D + +W
Sbjct: 374 HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 204 (76.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 52/178 (29%), Positives = 85/178 (47%)
Query: 155 PILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGA 213
P +++R ++ G VNR R M Q P + + V ++D H A+S+T
Sbjct: 105 PKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHA---AKSQT------ 155
Query: 214 PQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI 273
S P ++ GH EGY + W+P G L++G + I LW+ ++ V F+
Sbjct: 156 ---SECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFV 212
Query: 274 --GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
GH +++ D+ W ++F S DG + IWDTR + K H +VN +S+N
Sbjct: 213 YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQ-HQVKVHEREVNYLSFN 269
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 200 (75.5 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 50/172 (29%), Positives = 81/172 (47%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220
++ H+G VNR R M Q P I A+ + + V ++D + P+ + +
Sbjct: 116 RINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKY------------PSVPKDNTFN 163
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNP---FIGHSA 277
PL+K GH EGY + WNP G +++ + + W+ +A N + F GH +
Sbjct: 164 PLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHES 223
Query: 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
VED+ W VF S D + IWD R + AH+A+VN +++N
Sbjct: 224 VVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPG-HAIDAHSAEVNCLAFN 274
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 200 (75.5 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 51/178 (28%), Positives = 87/178 (48%)
Query: 155 PILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGA 213
P ++++ K+ G VNR R M Q P + + V ++D + L+ G
Sbjct: 106 PKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDY-ARLS-----------GK 153
Query: 214 PQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV-DP-NP 271
PQ S P ++ GH+ EGY + W+ G L++G + I LW+ ++ AT V +P +
Sbjct: 154 PQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHV 213
Query: 272 FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+ GH + +ED+ W ++F S D + IWD R + K H ++N +S+N
Sbjct: 214 YEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQ-HQVKVHEREINYLSFN 270
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 200 (75.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 57/174 (32%), Positives = 83/174 (47%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220
K+ ++G VNR R M QNP I A+ + V V+D H + + P S
Sbjct: 120 KINYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPS----------KPDPSGECNS 169
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV--DPNPFIGHSA 277
L GH+ EGY + WNP +G L++ + I LW+ A V F GH+A
Sbjct: 170 DL-HLRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTA 228
Query: 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADVNVISWN 329
VED+ W +F S + D + IWDTR ++ S A+ A+VN +S+N
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFN 282
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 198 (74.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 54/172 (31%), Positives = 83/172 (48%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220
K+ H G V+R R M NP I AS + V ++D H SE P+ +
Sbjct: 115 KINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKH-----PSE-------PKDTKFR 162
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN---VDPNPFIGHSA 277
P ++ GH+ EGY + W+ G L+T + I W+ ++ T + V + F GHS+
Sbjct: 163 PQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSS 222
Query: 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+ ED+ + VF S D + +WD R K LT+ H A+VN I++N
Sbjct: 223 NAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAV-GHTAEVNCITFN 273
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 198 (74.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 57/184 (30%), Positives = 90/184 (48%)
Query: 151 GSGTPILQL-RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
G T +Q+ +++ H G VNR R M QNP I A+ V V+D H S+ +
Sbjct: 110 GCATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKH-----PSKPPL 164
Query: 210 GQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNVD 268
GA +P +K GH EGY + W+ G L++G ++ I LW+ A+ ++D
Sbjct: 165 -DGAC-----NPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLD 218
Query: 269 PNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNV 325
F H VED+ W +F S D ++ IWD R ++ + S AH+ +VN
Sbjct: 219 AQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNC 278
Query: 326 ISWN 329
+++N
Sbjct: 279 LAFN 282
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 193 (73.0 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 50/174 (28%), Positives = 80/174 (45%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220
++ H+G VNR R M Q +I A+ + V ++D H P+ + +
Sbjct: 116 RINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH------------SAVPRDNTFN 163
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVD-----PNPFIGH 275
PL++ GH EGY + WNP G +++ + + W+ +A NV + F GH
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD--INANQNVAGELQAKDVFKGH 221
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+ VED+ W VF S D + IWD R AH+A+VN +++N
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPG-HCIDAHSAEVNCLAFN 274
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 193 (73.0 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 50/174 (28%), Positives = 80/174 (45%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220
++ H+G VNR R M Q +I A+ + V ++D H P+ + +
Sbjct: 116 RINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH------------SAVPRDNTFN 163
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVD-----PNPFIGH 275
PL++ GH EGY + WNP G +++ + + W+ +A NV + F GH
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD--INANQNVAGELQAKDVFKGH 221
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+ VED+ W VF S D + IWD R AH+A+VN +++N
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPG-HCIDAHSAEVNCLAFN 274
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 187 (70.9 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 57/187 (30%), Positives = 91/187 (48%)
Query: 152 SGTPILQL-RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVG 210
+G+ +++ +K+ H G VNR R M Q P I A+ + G+ ++D H +AL G
Sbjct: 117 TGSYTIEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCH-DALT-----TG 170
Query: 211 QGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEP-----ASDATW 265
+ PQ ++K GH EG+ + WNP G L TG + I LW+ S T
Sbjct: 171 EALPQA-----VLK--GHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETK 223
Query: 266 NVDP-NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG--KSALTSFKAHNAD 322
+ P + H+ V D+Q+ P + AS S D + I DTR+ + A +AH+
Sbjct: 224 VISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKA 283
Query: 323 VNVISWN 329
+N ++ N
Sbjct: 284 INAVAIN 290
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 176 (67.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 37/114 (32%), Positives = 55/114 (48%)
Query: 217 SNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHS 276
S P+ F H E Y++DWN +T +TG + I +W P D + F H
Sbjct: 92 SGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKT----FREHR 147
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNR 330
+ WSP +FAS S D + IWD+R +S L + KAH+ ++ WN+
Sbjct: 148 YCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS-LNTIKAHDHEILTCDWNK 200
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 192 VWDLRS-HLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC 250
+W R+ HL A + + + N+S L H E DWN +VTG
Sbjct: 154 IWSPRNAHLFASVSGDRTLKIWDSR-DNRS-LNTIKAHDHEILTCDWNKYNDKEVVTGSV 211
Query: 251 NSCIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309
+ I +W D + P + GH+ +V ++ SP + ASCS D + +WD
Sbjct: 212 DKTIRIW----DIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRARE 267
Query: 310 KSALTSFKAHNADVNV-ISWN 329
+ + + H+ + V + WN
Sbjct: 268 QDPIIARMDHHTEFVVGLDWN 288
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 167 (63.8 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 48/174 (27%), Positives = 91/174 (52%)
Query: 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSN 218
L+K+ H G VN++R M Q P+I AS + G++ +++ H + TI+ +S
Sbjct: 151 LQKINHLGDVNKVRYMPQKPNILASANNLGNLVIYERTRHKSF---KNTILDD--TDLSK 205
Query: 219 -QSPLV-KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHS 276
Q LV K + +AIDWN + G L++ D N + L++ + ++ + + ++
Sbjct: 206 VQVRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQYWENN 265
Query: 277 A-SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
A V D++W PT +F + +G + ++DTR +A+ + N+ VN ++ N
Sbjct: 266 AIGVNDIEWFPTHDSLFCTADDNGWLKLYDTRNQSAAVQNANIGNS-VNSVACN 318
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/164 (28%), Positives = 82/164 (50%)
Query: 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219
+++ H G VNR+R M QNP+I A+ + G+ ++D R+ ++ E + P +S
Sbjct: 126 QRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFD-RTKYTSMPAEEFL-----PNIS-- 177
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE--PASDATWNVDP-NPFIGHS 276
L+ GHK EG+ + WN RLVT +S I W+ S T + P F
Sbjct: 178 --LI---GHKKEGFGLSWNRQQNCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDD 232
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
+ V D+++ P +++ + + +G I D R+ ++ + KA N
Sbjct: 233 SPVNDVEYHPHHTNLYIAVNDNGIAFICDNRLQQTCSKTVKASN 276
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 119 (46.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
G ++T + + L++P S+ V N ++GH+ V+ ++WS T +F S + D H+
Sbjct: 313 GLIITASPDKNLRLYDPKSNQGTLVK-NTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVK 371
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+WD R K+ + H V W+
Sbjct: 372 LWDYRSPKAPIFELIGHEDKVLACDWS 398
Score = 72 (30.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 150 GGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESE 206
G + TP++ L H+ C++ ++ + N + +SW T +++WDL LN + +SE
Sbjct: 247 GSARTPLMTL--AGHRECISGVQWIDDNTLVTSSWDHT--IKIWDLA--LNGI-KSE 296
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 204 ESETIVGQGAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLV-TGDCNSCIYLWEPAS 261
ES ++ Q AP++S+ Q+PL++ GH E + +N + G+ + +G + I LW
Sbjct: 35 ESSALI-QAAPRLSSLQAPLMELSGHSGEIFCAKFN--SAGQYIASGSMDRSILLWRANG 91
Query: 262 DATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA 321
D N GH ++ DLQWS + D+ S S D H+A WD G+ + + H
Sbjct: 92 DCE-NY--GILSGHRGAILDLQWS-RDSDIIFSASADMHLASWDLTTGER-IRRYVGHEE 146
Query: 322 DVN 324
+N
Sbjct: 147 VIN 149
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 119 (46.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 25/103 (24%), Positives = 51/103 (49%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GHK + + ++ + G ++ + + L++P S+ + N ++GH+ V+ ++WS
Sbjct: 301 GHKSF-FDLSYSHLN-GLIIAASPDKNLRLYDPKSNQG-TIVKNTYLGHTQWVQSVRWST 357
Query: 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
T +F S + D H+ +WD R K+ + H V W+
Sbjct: 358 TNEYLFVSGAYDNHVKLWDYRSPKAPIFELIGHEDKVLACDWS 400
Score = 69 (29.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDL 195
TP+L L H+ C++ ++ + N + +SW T +++WDL
Sbjct: 253 TPVLTL--AGHRECISGVQWIDDNTLVTSSWDHT--IKIWDL 290
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 142 (55.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 228 HKDEGYAIDWNPITTGR-LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
H + +++ WN GR L +G + + ++ D + N + GH+ASV+ L W
Sbjct: 27 HMSKVHSVCWN--ADGRYLASGSFDKTVVVYSLERDRF--LKGNTYRGHTASVDQLCWHR 82
Query: 287 TEPDVFASCSVDGHIAIWDTRVGKS-ALTSFKAHNADVNVISWN 329
T PD FA+ S D + IWD RVGK ++T+ K N +N I+W+
Sbjct: 83 TNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGEN--IN-IAWS 123
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 142 (55.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 207 TIVGQGAPQVSN----QSPLVKFGGHKDEGYAIDWNPITTGR--LVTGDCNSCIYLWEPA 260
T G G+ Q+ + + PL + H E Y++DW+ T G +V+G + LW+PA
Sbjct: 83 TSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQ-TRGEQLVVSGSWDQTAKLWDPA 141
Query: 261 SDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
+ F GH + WSP P FAS S D + IWD + L AH
Sbjct: 142 VGKSLRT----FKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLV-IPAHQ 196
Query: 321 ADVNVISW 328
A++ W
Sbjct: 197 AEILSCDW 204
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 210 GQGAP-QVSNQSPLVKFGGHKDEGYAIDWNPITTGR-LVTGDCNSCIYLWEPASDATWNV 267
G+ A Q++ + PL+ HK+E Y++DW L++G + + LW D
Sbjct: 103 GESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLW----DCNRQN 158
Query: 268 DPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTR--VGKSALTSFKAHNADVNV 325
F+GH+ + ++SP ++FAS S DGH+ +W++ GK L S +AH ++
Sbjct: 159 SITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKP-LMSIEAHASEALC 217
Query: 326 ISWN 329
W+
Sbjct: 218 CDWS 221
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 139 (54.0 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 48/158 (30%), Positives = 68/158 (43%)
Query: 185 ADTGHVQVWDLRSH----LNALAE-SETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239
AD + W SH + A+ + S I P SN P+ F H E ++D+NP
Sbjct: 60 ADAVYDVCWS-ESHDSVLIAAIGDGSVKIYDTALPPPSN--PIRSFQEHAREVQSVDYNP 116
Query: 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG 299
+T + + LW A D +V F H+ V W+P DVFAS S D
Sbjct: 117 TRRDSFLTSSWDDTVKLW--AMDRPASV--RTFKEHAYCVYQAVWNPKHGDVFASASGDC 172
Query: 300 HIAIWDTRVGKSALTSFKAHNADVNVISWNR---CWLA 334
+ IWD R S + AH+ ++ WN+ C LA
Sbjct: 173 TLRIWDVREPGSTMI-IPAHDFEILSCDWNKYDDCILA 209
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 136 (52.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 151 GSGTPILQLR-KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIV 209
GS T ++ K+ H+G VNR R M QNPHI A+ + V V+D H
Sbjct: 152 GSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKH----------- 200
Query: 210 GQGAPQVSNQ-SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE 258
P S + +P ++ GH+ EGY + WN +G L++ + + LW+
Sbjct: 201 -PAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWD 249
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 39/118 (33%), Positives = 54/118 (45%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIG 274
+S ++P GH+ +I W+P G+ + C NS I+LW+PA T N G
Sbjct: 156 LSTETPQFTAKGHRHWVLSIAWSP--DGKKLASGCKNSQIFLWDPA---TGNQIGRVLTG 210
Query: 275 HSASVEDLQWSPTE--PDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
HS + L W P P+ AS S DG I IWDT +G+ H V + W
Sbjct: 211 HSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKI-LTGHTQSVTCVKW 267
Score = 124 (48.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 31/87 (35%), Positives = 46/87 (52%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDP-NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
RLV+G + ++LW PA D P GH A + + +SP + + AS S D I
Sbjct: 356 RLVSGSDDFTLFLWRPAEDKK----PLERMTGHQALINQVLFSP-DTRIIASASFDKSIK 410
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+W+ R GK LTS + H + V I+W+
Sbjct: 411 LWEGRTGKY-LTSLRGHVSAVYQIAWS 436
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 194 DLRSHLNALAESETIVGQGAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLV-TGDCN 251
DL ++ N + ++ G + SN Q+P+++ GH+ E + +++P G L+ + +
Sbjct: 22 DLMAYTN---RDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHP--EGELLLSSGFD 76
Query: 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311
IY+W+ D NV GHS +V + ++P +F +CS D +A WD G+
Sbjct: 77 RQIYIWQVYEDCE-NV--MAMSGHSGAVMEAHFTPDGSHIF-TCSTDKTLAFWDIATGQR 132
Query: 312 ALTSFKAHNADVNVISWNR 330
FK H VN + +R
Sbjct: 133 Q-RRFKGHGNFVNSVQGSR 150
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/128 (29%), Positives = 58/128 (45%)
Query: 207 TIVGQGAPQVSNQS----PLVKFGGHKDEGYAIDWNPITTGR--LVTGDCNSCIYLWEPA 260
T G G+ Q+ + + PL + H E Y++DW+ T G +V+G + + LW+P
Sbjct: 85 TCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQ-TRGEQLVVSGSWDQTVKLWDP- 142
Query: 261 SDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
T F GH + + WSP P FAS S D + IWD + + AH
Sbjct: 143 ---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIV-IPAHQ 198
Query: 321 ADVNVISW 328
A++ W
Sbjct: 199 AEILSCDW 206
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 220 SPLVKFG-GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNP---FIGH 275
SP +K H + + +DWNP ++TG ++ + +++ + T N +P F GH
Sbjct: 307 SPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFD-RRNLTSNGVGSPVYKFEGH 365
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWDT-RVGKSA 312
A+V +QWSP + VF S + DG + IWD RVGK +
Sbjct: 366 RAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKS 403
Score = 124 (48.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 37/116 (31%), Positives = 52/116 (44%)
Query: 221 PLVKFGGHKDEGYAIDWN---PITTGRLVTGDCNSCIYLWEPASDATWNVDPNP---FIG 274
P V GG KD+ + WN IT + S SD T P + G
Sbjct: 213 PFVLSGG-KDKSVIL-WNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNG 270
Query: 275 HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS-ALTSFKAHNADVNVISWN 329
H +VED+ + P+ F S D + +WD R G S A+ KAH+AD++ + WN
Sbjct: 271 HKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWN 326
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 39/128 (30%), Positives = 58/128 (45%)
Query: 207 TIVGQGAPQVSNQS----PLVKFGGHKDEGYAIDWNPITTGR--LVTGDCNSCIYLWEPA 260
T G G+ Q+ + + PL F H E Y++DW+ T G +V+G + + LW+P
Sbjct: 85 TCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQ-TRGEQLVVSGSWDQTVKLWDP- 142
Query: 261 SDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
T F GH + + WSP P FAS S D + IWD + + AH
Sbjct: 143 ---TVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIV-VPAHQ 198
Query: 321 ADVNVISW 328
A++ W
Sbjct: 199 AEILSCDW 206
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GH+ + W+P G+ + I +W + W GHS ++ D+ WSP
Sbjct: 12 GHRGRAWGAGWHPKGNVLATCGE-DKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSP 70
Query: 287 TEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
AS S D +AIWD + G+ + + H +V +SW++ LA C
Sbjct: 71 CG-QYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATC 122
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/187 (22%), Positives = 82/187 (43%)
Query: 152 SGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWD-LRSHLNALAESETIVG 210
+G +L++ + G +N ++ S D W L S+L A A + +V
Sbjct: 36 AGRSLLKVYSINSNGFTESCNMRGKNQNLSYSANDVA----WSTLDSNLLATAATNGVVS 91
Query: 211 Q-GAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP 269
+ Q L+ + H+ + + ++ L++G + I ++ SD + N
Sbjct: 92 VWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKSINT-- 149
Query: 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+ +S SV D+++SP ++F++ S +G + +WD R + F AH V W+
Sbjct: 150 --YFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWH 207
Query: 330 --RCWLA 334
R WLA
Sbjct: 208 PTRNWLA 214
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI--GHSASVEDLQW 284
GH+ + W+P G+ + I +W A D T P + GH+ ++ D+ W
Sbjct: 12 GHRGRVWGAGWHPRDPVLATCGE-DKTIRIW--ADDGTGRWVPKTVLSDGHTRTIRDVAW 68
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNR--CWLAVC 336
SP AS S D +AIWD R G+ + + H +V +SW++ LA C
Sbjct: 69 SPCGR-FLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATC 122
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 196 RSHLNALAESETIVGQGAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCI 254
R+ L A A+S+ + G P+ S+ Q+P++ GH+ E Y ++P L + + I
Sbjct: 22 RTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHP-NGATLASSGYDRLI 80
Query: 255 YLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314
+W D N GHS +V +L ++ T+ + S S D + +WD+ G+ +
Sbjct: 81 LMWNVYGDCE-NYAT--LKGHSGAVMELHYN-TDGSLLFSASTDKTVCVWDSETGER-VK 135
Query: 315 SFKAHNADVN 324
K H + VN
Sbjct: 136 RLKGHTSFVN 145
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 132 (51.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/128 (28%), Positives = 58/128 (45%)
Query: 207 TIVGQGAPQVSNQS----PLVKFGGHKDEGYAIDWNPITTGR--LVTGDCNSCIYLWEPA 260
T G G+ Q+ + + PL + H E Y++DW+ T G +V+G + + LW+P
Sbjct: 85 TCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQ-TRGEQLVVSGSWDQTVKLWDPT 143
Query: 261 SDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
+ F GH + + WSP P FAS S D + IWD + + AH
Sbjct: 144 VGRSLCT----FKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-VPAHQ 198
Query: 321 ADVNVISW 328
A++ W
Sbjct: 199 AEILSCDW 206
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 132 (51.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/128 (29%), Positives = 57/128 (44%)
Query: 207 TIVGQGAPQVSNQS----PLVKFGGHKDEGYAIDWNPITTGR--LVTGDCNSCIYLWEPA 260
T G G+ Q+ + + PL + H E Y++DW+ T G +V+G + + LW+P
Sbjct: 85 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQ-TRGEQLVVSGSWDQTVKLWDP- 142
Query: 261 SDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
T F GH + + WSP P FAS S D + IWD + AH
Sbjct: 143 ---TVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK-STGVRIVVPAHQ 198
Query: 321 ADVNVISW 328
A++ W
Sbjct: 199 AEILSCDW 206
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 36/127 (28%), Positives = 57/127 (44%)
Query: 207 TIVGQGAPQVSNQS----PLVKFGGHKDEGYAIDWNPITTGRLV-TGDCNSCIYLWEPAS 261
T G G+ Q+ + + PL + H E Y++DW+ +LV +G + + +W+P
Sbjct: 80 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDP-- 137
Query: 262 DATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA 321
T F GH + + WSP P FAS S D + IWD + + AH A
Sbjct: 138 --TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-IPAHQA 194
Query: 322 DVNVISW 328
++ W
Sbjct: 195 EILSCDW 201
>UNIPROTKB|F1NIQ7 [details] [associations]
symbol:CORO1C "Coronin" species:9031 "Gallus gallus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 EMBL:AADN02034974
EMBL:AADN02034968 EMBL:AADN02034969 EMBL:AADN02034970
EMBL:AADN02034971 EMBL:AADN02034972 EMBL:AADN02034973
IPI:IPI01017070 Ensembl:ENSGALT00000007836 ArrayExpress:F1NIQ7
Uniprot:F1NIQ7
Length = 200
Score = 124 (48.7 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVVLEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H + +SWNR +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHVDVIYNVSWNRNGSLIC 190
>UNIPROTKB|F1NIQ6 [details] [associations]
symbol:CORO1C "Coronin" species:9031 "Gallus gallus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 EMBL:AADN02034974
EMBL:AADN02034968 EMBL:AADN02034969 EMBL:AADN02034970
EMBL:AADN02034971 EMBL:AADN02034972 EMBL:AADN02034973
IPI:IPI00587350 Ensembl:ENSGALT00000007837 ArrayExpress:F1NIQ6
Uniprot:F1NIQ6
Length = 201
Score = 124 (48.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVVLEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H + +SWNR +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHVDVIYNVSWNRNGSLIC 190
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 131 (51.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 227 GHKDEGYAIDWNPITTGRLVT--GDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQ 283
GHK + + P L+T GD +C+ LW+ + +V F GH+A V+ +
Sbjct: 154 GHKGYVSSCQYVPDEDTHLITSSGD-QTCV-LWDITTGLRTSVFGGEFQSGHTADVQSVS 211
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S + P +F S S D +WDTRV A +F H DVN + +
Sbjct: 212 ISSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEGDVNTVKF 256
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 220 SPLVKFG-GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNP---FIGH 275
+P+ K H + + +DWNP ++TG ++ + L++ T N +P F GH
Sbjct: 327 NPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRK-LTANGVGSPIYKFEGH 385
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWD-TRVGKSA 312
A+V +QWSP + VF S + DG + IWD RV K +
Sbjct: 386 KAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKS 423
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/116 (31%), Positives = 55/116 (47%)
Query: 221 PLVKFGGHKDEGYAIDWN---PITTGRLVTGDCNSCIYLWEPASDATWNVDPNP---FIG 274
P V GG KD+ + W+ ITT + S I +D + P + G
Sbjct: 233 PFVLSGG-KDKSVVL-WSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHG 290
Query: 275 HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF-KAHNADVNVISWN 329
H +VED+ +SPT F S D + +WD R G + +T KAH+AD++ + WN
Sbjct: 291 HEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 126 (49.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 207 TIVGQGAPQVSNQSP----LVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS- 261
TI GQG + ++S +KF HKD GYA+ ++ + GRL++G + + LWE S
Sbjct: 136 TINGQGTVFLYSRSEGLQSTLKF--HKDNGYALSFSTLVKGRLLSGSDDHTVALWEVGSG 193
Query: 262 -DATWNVDP-NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK 317
D T V N HS + D +W D+F + S D + I D R + + + K
Sbjct: 194 GDPTKPVRTWNDL--HSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVK 249
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHV 190
K H+ + R R M Q+P+I A+ G V
Sbjct: 114 KYEHEEEITRARYMPQDPNIVATINGQGTV 143
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/172 (25%), Positives = 85/172 (49%)
Query: 161 KVAHQGCVNRIRAMT-QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219
K+AH G VNRI+ + + + + A G+V ++D+ H + ET+ + P+VS
Sbjct: 148 KIAHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKH-----KIETVDDKMNPEVS-- 200
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASV 279
F G++ +G+ +D+ PI L + + I +++ + T V P + + + V
Sbjct: 201 -----FVGNQSDGFGLDFQPIKKYILTCAN-DGLINVYDYNTLNTKTVQPFYKVQYKSPV 254
Query: 280 EDLQWSPT-EPDVFASCSVDGHIAIWDTRV-GKSALTSFKAHNADVNVISWN 329
D+ SPT +P++ +C+ +G+I I+D R+ VN ++ N
Sbjct: 255 NDI--SPTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALN 304
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/172 (25%), Positives = 85/172 (49%)
Query: 161 KVAHQGCVNRIRAMT-QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219
K+AH G VNRI+ + + + + A G+V ++D+ H + ET+ + P+VS
Sbjct: 148 KIAHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKH-----KIETVDDKMNPEVS-- 200
Query: 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASV 279
F G++ +G+ +D+ PI L + + I +++ + T V P + + + V
Sbjct: 201 -----FVGNQSDGFGLDFQPIKKYILTCAN-DGLINVYDYNTLNTKTVQPFYKVQYKSPV 254
Query: 280 EDLQWSPT-EPDVFASCSVDGHIAIWDTRV-GKSALTSFKAHNADVNVISWN 329
D+ SPT +P++ +C+ +G+I I+D R+ VN ++ N
Sbjct: 255 NDI--SPTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALN 304
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/118 (30%), Positives = 50/118 (42%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIG 274
+S ++P GH+ +I W+P GR + C N I LW+P+ T G
Sbjct: 143 LSTETPHFTCKGHRHWVLSISWSP--DGRKLASGCKNGQILLWDPS---TGKQVGRTLAG 197
Query: 275 HSASVEDLQWSP--TEPDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
HS + L W P P+ AS S DG + IWDT G+ H V + W
Sbjct: 198 HSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERI-LTGHTQSVTCLRW 254
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDP-NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
RLV+G + ++LW PA D P GH A + + +SP + + AS S D I
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKK----PLTRMTGHQALINQVLFSP-DSRIVASASFDKSIK 397
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+WD R GK L S + H A V I+W+
Sbjct: 398 LWDGRTGKY-LASLRGHVAAVYQIAWS 423
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 207 TIVGQGAPQVSNQS----PLVKFGGHKDEGYAIDWNPITTGR--LVTGDCNSCIYLWEPA 260
T G G+ Q+ + + PL + H E Y++DW+ T G +V+G + + +W+P
Sbjct: 80 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQ-TRGEQLVVSGSWDQTVKVWDP- 137
Query: 261 SDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
T F GH + + WSP P FAS S D + IWD + + AH
Sbjct: 138 ---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTAGVRIV-IPAHQ 193
Query: 321 ADVNVISW 328
++ W
Sbjct: 194 TEILSCDW 201
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 218 NQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA 277
N + +F H + +++ W+ RL +G + ++ D V N + GH
Sbjct: 15 NNNKSREFPAHSAKVHSVAWS-CDGKRLASGSFDKTASVFVLEKDRL--VKENNYRGHGD 71
Query: 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
SV+ L W PT PD+F + S D I IWD R K T S K N +N I W+
Sbjct: 72 SVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGEN--IN-ICWS 121
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/115 (29%), Positives = 51/115 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W + TW GH ++ +++W
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRIWS-LNGNTWTTKTILSDGHKRTIREIRW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S DG AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/115 (29%), Positives = 51/115 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W + TW+ GH ++ ++QW
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRIWSLTGN-TWSTKTILSDGHKRTIREIQW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S D AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>TAIR|locus:2100267 [details] [associations]
symbol:AT3G01340 "AT3G01340" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC010676
HOGENOM:HOG000216895 KO:K14004 ProtClustDB:CLSN2683847
EMBL:AF370262 EMBL:AY063079 IPI:IPI00528696 RefSeq:NP_001030616.1
RefSeq:NP_186783.1 UniGene:At.18565 ProteinModelPortal:Q9SRI1
SMR:Q9SRI1 IntAct:Q9SRI1 STRING:Q9SRI1 PRIDE:Q9SRI1 ProMEX:Q9SRI1
DNASU:821216 EnsemblPlants:AT3G01340.1 EnsemblPlants:AT3G01340.2
GeneID:821216 KEGG:ath:AT3G01340 TAIR:At3g01340 InParanoid:Q9SRI1
OMA:KIDQAHP PhylomeDB:Q9SRI1 ArrayExpress:Q9SRI1
Genevestigator:Q9SRI1 Uniprot:Q9SRI1
Length = 302
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/149 (26%), Positives = 60/149 (40%)
Query: 185 ADTGHVQVWDLRSHLNALAESE-TIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW-NPITT 242
+DT H V D A A S+ TI G L GH+ + + W +P
Sbjct: 11 SDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPKFG 70
Query: 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHI 301
L + + I LW+ + W + F H SV + W+P E + +C DG+I
Sbjct: 71 SLLASCSYDGQIILWKEGNQNQWT-QAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNI 129
Query: 302 AIWDTRV--GKSALTSFKAHNADVNVISW 328
+++ R G +AH V +SW
Sbjct: 130 SVFSARADGGWDTTKIDQAHPVGVTSVSW 158
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/118 (29%), Positives = 51/118 (43%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIG 274
+S ++P GH+ +I W+P G+ + C N I LW+P+ T G
Sbjct: 144 LSTETPHFTCQGHRHWVLSISWSP--DGKKLASGCKNGQILLWDPS---TGKQVGRALTG 198
Query: 275 HSASVEDLQWSP--TEPDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
HS + L W P P+ AS S DG + +WDT G+ T H V + W
Sbjct: 199 HSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERT-LTGHAQSVTCLRW 255
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 33/87 (37%), Positives = 45/87 (51%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
RLV+G + ++LW PA D P GH A + + +SP + V AS S D I
Sbjct: 344 RLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVVFSP-DSRVIASASFDKSIK 398
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+WD R GK L S + H A V I+W+
Sbjct: 399 LWDGRTGKY-LASLRGHVAAVYQIAWS 424
>UNIPROTKB|A2VDN8 [details] [associations]
symbol:CORO1C "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:23603 KO:K13887 EMBL:DAAA02045489
EMBL:BC133331 IPI:IPI00692453 RefSeq:NP_001075059.1 UniGene:Bt.9751
SMR:A2VDN8 Ensembl:ENSBTAT00000010507 GeneID:515798 KEGG:bta:515798
InParanoid:A2VDN8 NextBio:20872007 Uniprot:A2VDN8
Length = 474
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 190
>UNIPROTKB|F1Q1F6 [details] [associations]
symbol:CORO1C "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:23603 KO:K13887
EMBL:AAEX03014753 RefSeq:XP_543444.2 ProteinModelPortal:F1Q1F6
Ensembl:ENSCAFT00000035670 GeneID:486318 KEGG:cfa:486318
Uniprot:F1Q1F6
Length = 474
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 190
>UNIPROTKB|Q9ULV4 [details] [associations]
symbol:CORO1C "Coronin-1C" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] [GO:0006909 "phagocytosis"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007165 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0006909 GO:GO:0051015 EMBL:CH471054 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 EMBL:AB030656 EMBL:AK096363 EMBL:AL162070
EMBL:BC002342 IPI:IPI00943173 RefSeq:NP_055140.1 UniGene:Hs.330384
ProteinModelPortal:Q9ULV4 SMR:Q9ULV4 IntAct:Q9ULV4
MINT:MINT-1145632 STRING:Q9ULV4 PhosphoSite:Q9ULV4 DMDM:12643898
OGP:Q9ULV4 PaxDb:Q9ULV4 PeptideAtlas:Q9ULV4 PRIDE:Q9ULV4
DNASU:23603 Ensembl:ENST00000261401 Ensembl:ENST00000541050
GeneID:23603 KEGG:hsa:23603 UCSC:uc001tnj.3 CTD:23603
GeneCards:GC12M109038 HGNC:HGNC:2254 HPA:HPA041737 MIM:605269
neXtProt:NX_Q9ULV4 PharmGKB:PA26770 InParanoid:Q9ULV4 KO:K13887
PhylomeDB:Q9ULV4 ChiTaRS:CORO1C GenomeRNAi:23603 NextBio:46288
ArrayExpress:Q9ULV4 Bgee:Q9ULV4 CleanEx:HS_CORO1C
Genevestigator:Q9ULV4 GermOnline:ENSG00000110880 Uniprot:Q9ULV4
Length = 474
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 190
>UNIPROTKB|A7MAP0 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 HOVERGEN:HBG059978
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 UniGene:Hs.330384
HGNC:HGNC:2254 ChiTaRS:CORO1C EMBL:AC007569 EMBL:AM849477
IPI:IPI01022161 SMR:A7MAP0 STRING:A7MAP0 Ensembl:ENST00000549772
Uniprot:A7MAP0
Length = 480
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 84 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 143
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 144 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 196
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 207 TIVGQGAPQVSNQS----PLVKFGGHKDEGYAIDWNPITTGR--LVTGDCNSCIYLWEPA 260
T G G+ Q+ + + PL + H E Y++DW+ T G +V+G + + +W+P
Sbjct: 80 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQ-TRGEQLVVSGSWDQTVKVWDP- 137
Query: 261 SDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320
T F GH + + WSP P FAS S D + IWD + + AH
Sbjct: 138 ---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-IPAHQ 193
Query: 321 ADVNVISW 328
++ W
Sbjct: 194 TEILSCDW 201
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
F GHKD D+NP +L TG C+ + +W A A F+GH+ + + +
Sbjct: 14 FKGHKDVISCADFNP-NNKQLATGSCDKSLMIWNLAPKAR----AFRFVGHTDVITGVNF 68
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNR 330
+P+ + AS S D + +W + K T FKAH A V + ++R
Sbjct: 69 APSG-SLVASSSRDQTVRLWTPSI-KGESTVFKAHTASVRSVHFSR 112
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 241 TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH 300
++G L+TG + + LW+P S V + FIGH + + W+ + ++F S S D
Sbjct: 325 SSGMLITGSVDPVVRLWDPRSHEGTLVKQS-FIGHCGWISSVFWNKVKENLFISASFDKT 383
Query: 301 IAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHF 346
+ +WD R K+ L H+ + W+ L V ++ M+ +
Sbjct: 384 VKMWDVRSNKTPLYDLVGHSDRILCCDWSVNELIVSGGVDCTMKTY 429
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIG 274
+S ++P GH+ +I W+P G+ + C N I LW+P+ T G
Sbjct: 94 LSTETPHFTCQGHRHWVLSISWSP--DGKTLASGCKNGQILLWDPS---TGKQVGRVLAG 148
Query: 275 HSASVEDLQWSP--TEPDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
HS + L W P P+ AS S DG + +WDT G+ H V + W
Sbjct: 149 HSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRW 205
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
RLV+G + +++W PA D P GH A + + +SP + + AS S D I
Sbjct: 294 RLVSGSDDFTLFMWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIIASASFDKSIK 348
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+WD R GK L S + H A V I+W+
Sbjct: 349 LWDGRTGKY-LASLRGHVAAVYQIAWS 374
>UNIPROTKB|G3MWI5 [details] [associations]
symbol:CORO1C "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:VPKKTTD EMBL:DAAA02045489
Ensembl:ENSBTAT00000065151 Uniprot:G3MWI5
Length = 524
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 128 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 187
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 188 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 240
>UNIPROTKB|F1Q1Q0 [details] [associations]
symbol:CORO1C "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 OMA:VPKKTTD
EMBL:AAEX03014753 Ensembl:ENSCAFT00000017981 Uniprot:F1Q1Q0
Length = 525
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 129 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 188
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 189 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 241
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/115 (28%), Positives = 52/115 (45%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W + +TW+ GH ++ +++W
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRIWS-LTGSTWSTKTILSDGHKRTIREIRW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S D AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>UNIPROTKB|A7MAP1 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
UniGene:Hs.330384 HGNC:HGNC:2254 ChiTaRS:CORO1C OMA:VPKKTTD
EMBL:AC007569 EMBL:AM849478 IPI:IPI00867509
ProteinModelPortal:A7MAP1 SMR:A7MAP1 STRING:A7MAP1 PRIDE:A7MAP1
Ensembl:ENST00000420959 UCSC:uc009zva.3 ArrayExpress:A7MAP1
Bgee:A7MAP1 Uniprot:A7MAP1
Length = 527
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 131 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 190
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 191 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 243
>UNIPROTKB|F1RGA9 [details] [associations]
symbol:CORO1C "Coronin" species:9823 "Sus scrofa"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:VPKKTTD EMBL:CT827801
Ensembl:ENSSSCT00000010896 Uniprot:F1RGA9
Length = 528
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 132 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 191
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SWNR +C
Sbjct: 192 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLIC 244
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 207 TIVGQGAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATW 265
T+V Q P+ S +P+++ GH E +A+ ++P T + +G + I LW T+
Sbjct: 44 TLV-QAVPRTSGLNAPIMELTGHSGEVFAVRFDP-TAQHIASGSMDRSILLWN-----TY 96
Query: 266 NVDPNPFI--GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323
N I GH ++ DLQWS +F S S D +A WD G+ + + H +
Sbjct: 97 GQCENYGILSGHKGAILDLQWSRDSKTIF-SASADMTLASWDIESGQR-IRRYIGHEEVI 154
Query: 324 NVI 326
N +
Sbjct: 155 NSV 157
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GH + ++P ++ RL TG ++ +W DA + GH+ V + WSP
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIW----DAETGTPKHTLKGHAGWVLGVSWSP 205
Query: 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
+ A+CS+D + IWD GK + K H V I+W
Sbjct: 206 -DGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAW 246
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/115 (29%), Positives = 51/115 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W S TW+ GH ++ +++W
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRVWS-LSGNTWSTKTILSDGHKRTIREIRW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S D AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/115 (29%), Positives = 51/115 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W S TW+ GH ++ +++W
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRVWS-LSGNTWSTKTILSDGHKRTIREIRW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S D AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 224 KFGGHKDEGYAIDWNPITT---G-RLVTGDCN--SCIYLWEPAS-DATWNVDPNPFIGHS 276
K GH D +++ WNP+++ G + C+ + + +WE +S +W H+
Sbjct: 15 KLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHT 74
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNR---CW 332
+V WSP+ + A+ S DG IW + +++ + H +V +SWN C
Sbjct: 75 RTVRSCAWSPSG-QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC- 132
Query: 333 LAVC 336
LA C
Sbjct: 133 LATC 136
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G + S + P+++ GHK E Y+ +N T L +G + I+LW + ++ +
Sbjct: 44 GTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTA-LASGGSDKEIFLWNVYGEC---INYS 99
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GH ++ +L WS +++ +C+ D I +WD+ G+ + + H+ VN
Sbjct: 100 VLKGHKGTILELHWSTDSNEIYTACT-DKSIGVWDSNKGE-LIKRIREHSGVVN 151
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVT--GDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQ 283
GH+ + P L+T GD +CI LW+ + +V F GH+A V +
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGD-QTCI-LWDVTTGLKTSVFGGEFQSGHTADVLSVS 211
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S + P+ F S S D +WDTR A+ +F H DVN + +
Sbjct: 212 ISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKF 256
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 118 (46.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 42/176 (23%), Positives = 75/176 (42%)
Query: 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNA-LAES------ETIVGQGAPQVSN 218
G NR R + QNP I A + G + ++D H + + +S ET + + +
Sbjct: 130 GECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQD 189
Query: 219 QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VD-PNPFIGH 275
+ +E ++ WN L++ N + +W+ + N +D P I
Sbjct: 190 VEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINS 249
Query: 276 SA-SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-HNADVNVISWN 329
+V D+ W PT +FA+C+ +++ D R K L S + H+ VN +N
Sbjct: 250 DGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFN 305
Score = 110 (43.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 31/95 (32%), Positives = 44/95 (46%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHIAI 303
L + D N + LW+ + N P + H SV L+WSP V A+ DG + +
Sbjct: 312 LASADSNGRLNLWDIRN---MNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKL 368
Query: 304 WDTRVGKSALTSFKAHNADVNVISWNRC--WLAVC 336
WDT ++ T H VN ISW+ WL +C
Sbjct: 369 WDTSCEETIFTH-GGHMLGVNDISWDAHDPWL-MC 401
Score = 81 (33.6 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 218 NQSPLVKFGGHKDEGYAIDWNPITTGRLVT-GDCNSCIYLWEPASDATWNVDPNPFIGHS 276
N+SP+ H ++W+P L T G + + LW+ + + T GH
Sbjct: 330 NKSPIATME-HGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSCEETIFTHG----GHM 384
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIW 304
V D+ W +P + S + D + IW
Sbjct: 385 LGVNDISWDAHDPWLMCSVANDNSVHIW 412
Score = 66 (28.3 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRS 197
LQ + H G VN R +N I AS G + +WD+R+
Sbjct: 288 LQSNREKHDGGVNSCRFNYKNSLILASADSNGRLNLWDIRN 328
Score = 48 (22.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 57 YNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNI 114
Y+ L+ WP L+ D L +E H + T ++KP +I + K+S +
Sbjct: 34 YDYLNTNSTKWPSLTCQFFPD-LDTTSDE--HRILLSSFTSSQKPEDETIYISKISTL 88
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W + TW+ GH ++ +++W
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRIWSLTGN-TWSTKTILSDGHKRTIREIRW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S D AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W + TW+ GH ++ +++W
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRIWSLTGN-TWSTKTILSDGHKRTIREIRW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S D AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIG 274
+S ++P GH+ +I W+P G+ + C N I LW+P+ T G
Sbjct: 143 LSTETPHFTCQGHRHWVLSISWSP--DGKKLASGCKNGQILLWDPS---TGKQVGRALAG 197
Query: 275 HSASVEDLQWSP--TEPDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
HS + L W P P+ AS S DG + +WDT G+ H V + W
Sbjct: 198 HSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRW 254
Score = 124 (48.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
RLV+G + ++LW PA D P GH A + + +SP + + AS S D I
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIIASASFDKSIK 397
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+WD R GK L S + H A V I+W+
Sbjct: 398 LWDGRTGKY-LASLRGHVAAVYQIAWS 423
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 33/118 (27%), Positives = 50/118 (42%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIG 274
+S ++P GH+ +I W+P G+ + C N I LW+P++ G
Sbjct: 145 LSTETPHFTCKGHRHWVLSISWSP--DGKKLASGCKNGQILLWDPSTGTQVG---RTLTG 199
Query: 275 HSASVEDLQWSPTE--PDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
HS + L W P P+ AS S DG + +WDT G+ H V + W
Sbjct: 200 HSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRW 256
Score = 123 (48.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
RLV+G + ++LW PA D P GH A + + +SP + + AS S D I
Sbjct: 345 RLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIVASASFDKSIK 399
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+WD R GK L S + H A V I+W+
Sbjct: 400 LWDGRTGKY-LASLRGHVAAVYQIAWS 425
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNS-CIYLWEPASDATWNVDPNPFIG 274
++ ++P GHK + W P G+ + C + I +W+P T P G
Sbjct: 148 LNTETPHFTCTGHKQWVLCVSWAP--DGKRLASGCKAGSIIIWDPE---TGQQKGRPLSG 202
Query: 275 HSASVEDLQWSP--TEPDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
H + L W P +P+ AS S DG IWD ++G+ L + H V + W
Sbjct: 203 HKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQ-CLMNIAGHTNAVTAVRW 259
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 108 (43.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 222 LVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS----DATWNVDPNP----FI 273
L F HKDE + + W+P L + + + +W+ + + + + P FI
Sbjct: 58 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI 117
Query: 274 --GHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
GH+A + D W+P EP V S S D + +W
Sbjct: 118 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 150
Score = 39 (18.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRS 197
AH VN + + I A+ + V +WDLR+
Sbjct: 19 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 53
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/117 (29%), Positives = 52/117 (44%)
Query: 219 QSPLVKFGGHKDEGYAIDWNPITTGRLV-TGDCNSCIYLWEPASDATWNVDPNPFIGHSA 277
Q+P+ GH + + W+P G ++ TG ++ I LW+P S + GHS
Sbjct: 176 QTPMHTLKGHYNWVLCVSWSP--DGEVIATGSMDNTIRLWDPKSGQCLG---DALRGHSK 230
Query: 278 SVEDLQWSP---TEPDV---FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
+ L W P +P AS S DG I IWDT V + + H V+ + W
Sbjct: 231 WITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDT-VSRVCQYTMSGHTNSVSCVKW 286
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 33/115 (28%), Positives = 50/115 (43%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GHK + + W+P G V C + I +W + TW GH ++ +++W
Sbjct: 12 GHKGRIWGVAWHP--KGN-VFASCGEDKAIRIWSLTGN-TWGTKTILSDGHKRTIREIRW 67
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
SP AS S D AIW G+ + + H +V +SW+R LA C
Sbjct: 68 SPCG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
>ZFIN|ZDB-GENE-030114-6 [details] [associations]
symbol:coro1ca "coronin, actin binding protein, 1Ca"
species:7955 "Danio rerio" [GO:0051015 "actin filament binding"
evidence=IBA] [GO:0030036 "actin cytoskeleton organization"
evidence=IBA] [GO:0015629 "actin cytoskeleton" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030114-6 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 GO:GO:0051015
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:BC045340 IPI:IPI00860139 RefSeq:NP_958452.1 UniGene:Dr.76386
ProteinModelPortal:Q7ZW06 SMR:Q7ZW06 PRIDE:Q7ZW06 GeneID:317741
KEGG:dre:317741 CTD:317741 InParanoid:Q7ZW06 NextBio:20807169
ArrayExpress:Q7ZW06 Bgee:Q7ZW06 Uniprot:Q7ZW06
Length = 474
Score = 125 (49.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI---GHSASVEDLQ 283
GH IDW P + +G + + +W+ + P + GHS V +
Sbjct: 79 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLVTSMSEPVVVLEGHSKRVGVVT 138
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV-ISWNRCWLAVC 336
W PT +V S D I IW+ G+S +T + H+ D+ + WNR +C
Sbjct: 139 WHPTARNVLLSAGCDNMIIIWNVGTGESMIT-LEDHHPDIIYSVCWNRNGSLIC 191
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 50 EFPAHSAKVHSVAWS-CDGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 104
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
L W P+ PD+F + S D I IWD R K T + K N +N I W+
Sbjct: 105 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN--IN-ICWS 150
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 50 EFPAHSAKVHSVAWS-CDGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 104
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
L W P+ PD+F + S D I IWD R K T + K N +N I W+
Sbjct: 105 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN--IN-ICWS 150
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 50 EFPAHSAKVHSVAWS-CDGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 104
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
L W P+ PD+F + S D I IWD R K T + K N +N I W+
Sbjct: 105 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN--IN-ICWS 150
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 50 EFPAHSAKVHSVAWS-CDGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 104
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
L W P+ PD+F + S D I IWD R K T + K N +N I W+
Sbjct: 105 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN--IN-ICWS 150
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 50 EFPAHSAKVHSVAWS-CDGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 104
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
L W P+ PD+F + S D I IWD R K T + K N +N I W+
Sbjct: 105 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN--IN-ICWS 150
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 193 WDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR-LVTGDCN 251
W+ H+ + ++ Q +V++ + FGGH E + W+P GR L +G +
Sbjct: 277 WN--DHILSSGSRSGLIHQHDVRVADHH-IFTFGGHTQEVCGLTWSP--DGRYLASGGND 331
Query: 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASC--SVDGHIAIWDTRVG 309
+ +Y+W P + + N + H +V+ L W P +P++ AS + D HI IW+ G
Sbjct: 332 NMMYIW-PMTTGSENQAIHALSEHQGAVKALAWCPWQPNIPASGGGTSDRHIRIWNASSG 390
Query: 310 KSALTS 315
S ++S
Sbjct: 391 -SCISS 395
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 124 (48.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + I LW+P + V + H+ V L+WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSLKWSPTHEQQLIS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH V + W
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|F8VV53 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR015505 PANTHER:PTHR10856
HGNC:HGNC:2254 ChiTaRS:CORO1C EMBL:AC007569 IPI:IPI01021948
ProteinModelPortal:F8VV53 SMR:F8VV53 Ensembl:ENST00000552871
ArrayExpress:F8VV53 Bgee:F8VV53 Uniprot:F8VV53
Length = 125
Score = 102 (41.0 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 256 LWE-PASDATWNV-DPNPFI-GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312
+W+ P + T ++ +P + GHS V + W PT +V S D I IW+ G++
Sbjct: 2 VWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEAL 61
Query: 313 LTSFKAHNADVNVISWNRCWLAVC 336
+ H+ + +SWNR +C
Sbjct: 62 INLDDMHSDMIYNVSWNRNGSLIC 85
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220
K+ H+ +N+I +N I A + G++ ++++ + N E E I +
Sbjct: 131 KIYHESEINKISCYPENADIVACFCSDGNINIFNINDYYNKDDEDE-IKNDN---ILTFD 186
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEP-ASDATWNVDPNPFIGHSASV 279
+K GH +G+ ++W+ GD +S + +W+ SD + F H+ +
Sbjct: 187 KTLK--GHLYQGWGLEWDDKNNYISSCGD-DSYLCIWDMNTSDKIMHPIVKYF-NHNIPL 242
Query: 280 EDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+D W+ + +V S S +GHI I+D R K+ + S A N +N I N
Sbjct: 243 QDCCWN--DNNVL-SVSENGHINIYDIR-NKTVVNSICATNCTLNSIDVN 288
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220
K+ H+ +N+I +N I A + G++ ++++ + N E E I +
Sbjct: 131 KIYHESEINKISCYPENADIVACFCSDGNINIFNINDYYNKDDEDE-IKNDN---ILTFD 186
Query: 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEP-ASDATWNVDPNPFIGHSASV 279
+K GH +G+ ++W+ GD +S + +W+ SD + F H+ +
Sbjct: 187 KTLK--GHLYQGWGLEWDDKNNYISSCGD-DSYLCIWDMNTSDKIMHPIVKYF-NHNIPL 242
Query: 280 EDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+D W+ + +V S S +GHI I+D R K+ + S A N +N I N
Sbjct: 243 QDCCWN--DNNVL-SVSENGHINIYDIR-NKTVVNSICATNCTLNSIDVN 288
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 122 (48.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GHK + + W+P G+ + I +W S TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWS-LSGNTWTTKTILSDGHKRTIREVRWSP 69
Query: 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCW--LAVC 336
+ AS S D AIW + + H +V +SW+R LA C
Sbjct: 70 CG-EYLASASFDATTAIWSKH---ECTATLEGHENEVKSVSWSRSGGLLATC 117
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 122 (48.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GHK + + W+P G+ + I +W S TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWS-LSGNTWTTKTILSDGHKRTIREVRWSP 69
Query: 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCW--LAVC 336
+ AS S D AIW + + H +V +SW+R LA C
Sbjct: 70 CG-EYLASASFDATTAIWSKH---ECTATLEGHENEVKSVSWSRSGGLLATC 117
>UNIPROTKB|Q5ZI60 [details] [associations]
symbol:CORO1C "Coronin" species:9031 "Gallus gallus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:23603 KO:K13887 OMA:VPKKTTD
EMBL:AADN02034974 EMBL:AADN02034968 EMBL:AADN02034969
EMBL:AADN02034970 EMBL:AADN02034971 EMBL:AADN02034972
EMBL:AADN02034973 EMBL:AJ720924 IPI:IPI00818498
RefSeq:NP_001034354.1 UniGene:Gga.8826 SMR:Q5ZI60
Ensembl:ENSGALT00000007835 GeneID:416893 KEGG:gga:416893
InParanoid:Q5ZI60 NextBio:20820287 Uniprot:Q5ZI60
Length = 474
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVVLEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H + +SWNR +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHVDVIYNVSWNRNGSLIC 190
>MGI|MGI:1345964 [details] [associations]
symbol:Coro1c "coronin, actin binding protein 1C"
species:10090 "Mus musculus" [GO:0000147 "actin cortical patch
assembly" evidence=TAS] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0006909 "phagocytosis"
evidence=TAS] [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA;TAS]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1345964 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 GO:GO:0006909
GO:GO:0051015 GO:GO:0000147 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:23603 KO:K13887
ChiTaRS:CORO1C EMBL:AF143957 EMBL:AK079327 EMBL:AK082986
EMBL:AK088101 EMBL:BC019444 EMBL:BC085498 IPI:IPI00124820
RefSeq:NP_035909.2 UniGene:Mm.260158 ProteinModelPortal:Q9WUM4
SMR:Q9WUM4 STRING:Q9WUM4 PhosphoSite:Q9WUM4 PaxDb:Q9WUM4
PRIDE:Q9WUM4 DNASU:23790 Ensembl:ENSMUST00000004646 GeneID:23790
KEGG:mmu:23790 InParanoid:Q9WUM4 OMA:VPKKTTD NextBio:303391
Bgee:Q9WUM4 CleanEx:MM_CORO1C Genevestigator:Q9WUM4
GermOnline:ENSMUSG00000004530 Uniprot:Q9WUM4
Length = 474
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SW+R +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLIC 190
>RGD|1564490 [details] [associations]
symbol:Coro1c "coronin, actin binding protein 1C" species:10116
"Rattus norvegicus" [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1564490 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0030036 GO:GO:0015629 GO:GO:0051015 EMBL:CH473973
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
CTD:23603 KO:K13887 OMA:VPKKTTD RefSeq:NP_001102797.1
UniGene:Rn.45957 PRIDE:G3V624 Ensembl:ENSRNOT00000000886
GeneID:501841 KEGG:rno:501841 NextBio:709990 Uniprot:G3V624
Length = 474
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 78 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVA 137
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H+ + +SW+R +C
Sbjct: 138 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRNGSLIC 190
>UNIPROTKB|F1NXA5 [details] [associations]
symbol:CORO1C "Coronin" species:9031 "Gallus gallus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:VPKKTTD EMBL:AADN02034974
EMBL:AADN02034968 EMBL:AADN02034969 EMBL:AADN02034970
EMBL:AADN02034971 EMBL:AADN02034972 EMBL:AADN02034973
IPI:IPI00576513 Ensembl:ENSGALT00000022977 ArrayExpress:F1NXA5
Uniprot:F1NXA5
Length = 475
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPFI-GHSASVEDLQ 283
GH IDW P + +G + + +W+ P + T ++ +P + GHS V +
Sbjct: 79 GHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVVLEGHSKRVGIVA 138
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336
W PT +V S D I IW+ G++ + H + +SWNR +C
Sbjct: 139 WHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHVDVIYNVSWNRNGSLIC 191
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 108 (43.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 222 LVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS----DATWNVDPNP----FI 273
L F HKDE + + W+P L + + + +W+ + + + + P FI
Sbjct: 65 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI 124
Query: 274 --GHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
GH+A + D W+P EP V S S D + +W
Sbjct: 125 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 157
Score = 39 (18.8 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRS 197
AH VN + + I A+ + V +WDLR+
Sbjct: 26 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 60
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 185 ADTGHVQVWDLRSHLNALAESETI 208
AD + +WD RS+ N S ++
Sbjct: 2 ADDQKLMIWDTRSN-NTSKPSHSV 24
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293
++ ++P+ RL +G + I LW+P S ++ H+ V ++WSPT
Sbjct: 290 SVSYSPLCR-RLASGSTDRHIRLWDPRSK-DGSLVLLSLTSHTGWVTSVKWSPTHEHQLI 347
Query: 294 SCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWL 333
S S+D + +WDTR K+ L AH V + W L
Sbjct: 348 SGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEAGL 387
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 124 (48.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Query: 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIG 274
+S ++P GH+ +I W+P G+ + C N + LW+P++ G
Sbjct: 143 LSTETPHFTCKGHRHWVLSISWSP--DGKKLASGCKNGQVLLWDPSTGLQVG---RTLTG 197
Query: 275 HSASVEDLQWSPTE--PDV--FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
HS + L W P P+ AS S DG + +WDT G+ H V + W
Sbjct: 198 HSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRW 254
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302
RLV+G + ++LW PA D P GH A + + +SP + + AS S D I
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIVASASFDKSIK 397
Query: 303 IWDTRVGKSALTSFKAHNADVNVISWN 329
+WD R GK L S + H A V I+W+
Sbjct: 398 LWDGRTGKY-LASLRGHVAAVYQIAWS 423
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 121 (47.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQ 283
++ GHK + +++ WN T +L +G + +W GH+ SV+ L
Sbjct: 15 EYQGHKKKVHSVAWNSNGT-KLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGK 310
W P D+ A+ S D + +WD R GK
Sbjct: 74 WDPKHSDLVATASGDKSVRLWDARSGK 100
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQ 283
+F G+K + + ++P+ G ++T + + L++P S N N ++GHS V+ +
Sbjct: 297 EFTGNKSF-FDLSYSPLN-GMIITASPDKNLRLYDPRSKHG-NFVKNTYLGHSQWVQTCR 353
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
WS T +F S + D + +WD R K+ + H V W+
Sbjct: 354 WSTTNEYLFVSGAYDNRVKLWDYRSPKAPIFELIGHEDKVLACDWS 399
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 227 GHKDEGYAIDWNPITTGRLVT--GDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQ 283
GHK + + P RL+T GD +C+ LW+ + ++ F GH+A V L
Sbjct: 155 GHKGYVSSCQYVPDQETRLITSSGD-QTCV-LWDVTTGQRISIFGGEFPSGHTADVLSLS 212
Query: 284 WSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
+ + ++F S S D + +WD R+ A+ ++ H D+N + +
Sbjct: 213 INSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDINSVKF 257
>UNIPROTKB|A8XL02 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 EMBL:HE600904 HAMAP:MF_03029
ProteinModelPortal:A8XL02 STRING:A8XL02 EnsemblMetazoa:CBG14922
WormBase:CBG14922 HOGENOM:HOG000154844 Uniprot:A8XL02
Length = 446
Score = 123 (48.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 234 AIDWNPITTGRLVTGDCNSCI-YLWEPASDATWNVDPNPFIGHSAS-VEDLQWSPTEPDV 291
+ID +P T L+ C I L++P + V + FIGH VE ++W+P + +
Sbjct: 333 SIDIHP--TSNLLISSCTDAIPRLYDPKNRDGAMVKQS-FIGHQNGWVESVKWNPVDENQ 389
Query: 292 FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLA 334
F S S D +WD R KS+L H + +WN +A
Sbjct: 390 FVSVSTDKTAKMWDVRSSKSSLFDIHGHEDRILCAAWNEGLIA 432
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 50 EFLAHSAKVHSVAWS-CDGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 104
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
L W P+ PD+F + S D I IWD R K T + K N +N I W+
Sbjct: 105 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN--IN-ICWS 150
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
+VT + + L++P ++ +V N ++GH+A V+ + WS TE +F S S D +W
Sbjct: 306 IVTASADKNLRLYDPRTNQG-SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLW 364
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 365 DCRSPKAPLYDLLGHGEKVLDIDWS 389
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + I LW+P + V + H+ V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH V + W
Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + I LW+P + V + H+ V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWL 333
S+D + +WDTR K+ L AH V + W L
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGL 399
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + I LW+P + V + H+ V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHDQQLIS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH V + W
Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 22 EFPAHGAKVHSVAWS-CCGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 76
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
L W P+ PD+F + S D I IWD R K T + K N +N I W+
Sbjct: 77 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN--IN-ICWS 122
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 39/153 (25%), Positives = 64/153 (41%)
Query: 186 DTGHVQV-----WDLRSHLNALAESE-TIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW-N 238
+TGH + D A A S+ TI G L GH+ + + W +
Sbjct: 7 ETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAH 66
Query: 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASC-SV 297
P L + + + LW+ + W D + F H +SV + W+P + + +C S
Sbjct: 67 PKYGSILASCSYDGQVILWKEGNQNQWTQD-HVFTDHKSSVNSIAWAPHDIGLSLACGSS 125
Query: 298 DGHIAIWDTRVGKSALTSF--KAHNADVNVISW 328
DG+I+++ R TS +AH V +SW
Sbjct: 126 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 158
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + I LW+P + V + H+ V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH V + W
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + I LW+P + V + H+ V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH V + W
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + I LW+P + V + H+ V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH V + W
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 120 (47.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 211 QGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
Q P +P ++ GHK EG+ + W+P G L TG + + + A V
Sbjct: 155 QSVP-TGTVNPQMELLGHKQEGFGLSWSPHVAGHLATG---RDLTTYTKNNKALQPV--R 208
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG---KSALTSFKAHNADVNVIS 327
+ HS+ V D+Q P + + S D + I DTRV ++A T+ H +N I+
Sbjct: 209 TYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIA 268
Query: 328 WN 329
+N
Sbjct: 269 FN 270
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 159 LRKVAHQGCVNRIRAM 174
++K+ H+G VN+ R M
Sbjct: 132 VQKIDHKGEVNKARVM 147
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GHK + + W+P G+ + I +W + + TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWSQSGN-TWTTKTILSDGHKRTIREVRWSP 69
Query: 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCW--LAVC 336
+ AS S D AIW + L + H +V +SW++ LA C
Sbjct: 70 CG-EYLASASFDATTAIWSKHECNATL---EGHENEVKSVSWSQSGGLLATC 117
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 30/113 (26%), Positives = 50/113 (44%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GHK + + W+P G+ + I +W S +W+ GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGE-DKAIRIWS-LSGNSWSTKTILSDGHKRTIREIRWSP 69
Query: 287 TEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
AS S D AIW G+ + + H +V +SW++ LA C
Sbjct: 70 CG-QYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATC 121
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 48 GPPRCSSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCD-NYAT- 104
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 105 -LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 155
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCD-NYAT- 105
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 106 -LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 156
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCD-NYAT- 105
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 106 -LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 156
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCD-NYAT- 105
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 106 -LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 156
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCD-NYAT- 105
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 106 -LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 156
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWSVYGDCD-NYAT- 105
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 106 -LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 156
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 226 GGHKDEGYAIDWNPITTGRLVT--GDCNSCIYLWEPASDA---TWNVDPNPFIGHSASVE 280
G H Y ++WN +T G + T GD I+ +P SD T+++ + H+ V
Sbjct: 245 GYHTRTVYDVNWNHLT-GAIATACGDDAVRIFEEDPGSDPLQPTFSLTAHMPRAHTQDVN 303
Query: 281 DLQWSPTEPDVFASCSVDGHIAIW 304
+ W P EP++ ASCS DG +A W
Sbjct: 304 CVTWHPKEPNLLASCSDDGEMAFW 327
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 182 ASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241
AS +D V++W R +L +E V S + G H Y I W +T
Sbjct: 210 ASCSDDRTVRIW--RQYLPG---NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT 264
Query: 242 TGRLVT--GDCNSCIYLWEPASDA---TWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS 296
G L T GD ++ +P SD T+++ + HS V + W+P EP + ASCS
Sbjct: 265 -GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323
Query: 297 VDGHIAIW 304
DG +A W
Sbjct: 324 DDGEVAFW 331
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 224 KFGGHKDEGYAIDWNPITTGRLVTG--DCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281
+F H + +++ W+ RL +G D + ++L E D V N + GH SV+
Sbjct: 50 EFPAHSAKVHSVAWS-CDGRRLASGSFDKTASVFLLE--KDRL--VKENNYRGHGDSVDQ 104
Query: 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314
L W P+ PD+F + S D I IWD R K T
Sbjct: 105 LCWHPSNPDLFVTASGDKTIRIWDVRTTKCIAT 137
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 212 GAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN 270
G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 48 GPPRCSSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCD-NYAT- 104
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 105 -LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 155
>DICTYBASE|DDB_G0288425 [details] [associations]
symbol:gemin5 "component of gems 5" species:44689
"Dictyostelium discoideum" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0288425 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006397 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003723 EMBL:AAFI02000111
GO:GO:0015030 RefSeq:XP_636745.1 ProteinModelPortal:Q54IY5
EnsemblProtists:DDB0302538 GeneID:8626623 KEGG:ddi:DDB_G0288425
eggNOG:NOG249859 KO:K13133 OMA:SENISKM Uniprot:Q54IY5
Length = 1276
Score = 112 (44.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 272 FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
FIGH +V + WS +P++ S S DG + +W+ + K A+++ + H+ V + W+
Sbjct: 861 FIGHKNNVCSVSWSNVDPNLLGSASADGTVQVWNIK-SKEAISNMRGHDGRVFTVCWS 917
Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 217 SNQSPLVKFGGHKDEGYAIDWNPITT 242
+NQS + GGHK+E Y I W P T
Sbjct: 568 TNQSKIFP-GGHKNEIYEIIWKPPPT 592
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P++ RL +G + I LW+P S ++ H+ V ++WSP+ S
Sbjct: 303 ISYSPLSQ-RLASGSTDRHIRLWDPRSK-DGSLVLCSLTSHTGWVTSVKWSPSHEQQLVS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH+ V + W
Sbjct: 361 GSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDW 394
>UNIPROTKB|B4KKN1 [details] [associations]
symbol:GI17814 "Ribosome biogenesis protein WDR12 homolog"
species:7230 "Drosophila mojavensis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH933807
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002003253.1
ProteinModelPortal:B4KKN1 EnsemblMetazoa:FBtr0168539 GeneID:6577286
KEGG:dmo:Dmoj_GI17814 FlyBase:FBgn0140555 InParanoid:B4KKN1
Uniprot:B4KKN1
Length = 419
Score = 104 (41.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
+VT + + L++ ++ +V + ++GH+A V+ + WS TE +F S + D +W
Sbjct: 306 IVTASADKNLRLYDARTNQG-SVVRSTYLGHNAWVQTVMWSITEEFLFVSGAYDNQNKLW 364
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 365 DCRSPKAPLYDLLGHGEKVLDIDWS 389
Score = 56 (24.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 151 GSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDL 195
G TP + L+ H+ ++ ++ M N + SW T ++VWDL
Sbjct: 239 GVRTPRMTLQ--GHRESISAVQWMDNNTLLTGSWDHT--LKVWDL 279
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 34/127 (26%), Positives = 57/127 (44%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG 274
++ P F GH+ E + W+P TG L+ SC + ++ WN+ + F+
Sbjct: 434 KIGETRPAKTFTGHQGEVNCVKWDP--TGSLLA----SCS---DDSTAKIWNIKQSTFVH 484
Query: 275 ----HSASVEDLQWSPTEPDV--------FASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322
H+ + ++WSPT P AS S D + +WD +GK L SF H
Sbjct: 485 DLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM-LCSFNGHREP 543
Query: 323 VNVISWN 329
V ++++
Sbjct: 544 VYSLAFS 550
>POMBASE|SPBC1711.16 [details] [associations]
symbol:SPBC1711.16 "WD repeat protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0043234 "protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.16 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006364 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET eggNOG:NOG290487 OrthoDB:EOG4DNJCV RefSeq:NP_595889.1
ProteinModelPortal:Q9P775 STRING:Q9P775 EnsemblFungi:SPBC1711.16.1
GeneID:2539789 KEGG:spo:SPBC1711.16 NextBio:20800938 Uniprot:Q9P775
Length = 516
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 41/144 (28%), Positives = 70/144 (48%)
Query: 190 VQVWDLRSHLNALAESETIVGQGAPQVSNQ---SPLVKFGGHKDEGYAIDWNPITTGRLV 246
+++WDL ++A+ + ++G GA QV+ + S + H D A+ N LV
Sbjct: 214 IEIWDL-DIIDAVYPA-AVLGAGASQVNKKKKKSKKINDSYHTDAVLALSSNRNAHNLLV 271
Query: 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306
+G ++ + LW+ + T N + F HS V L W P V S S D I D
Sbjct: 272 SGSADTTLKLWDLS---TCNCVKS-FTYHSDKVSCLDWYSKAPSVLLSGSYDKTAKIADL 327
Query: 307 RVGKSALTSFKAHNADVNVISWNR 330
R+ + A +SF+ +DV ++W++
Sbjct: 328 RL-EEAPSSFQV-TSDVENVAWDQ 349
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 208 IVGQGAPQVSN-QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN 266
++ G P+ S+ Q+P++ GH+ E Y ++P L + + I LW D N
Sbjct: 71 LLQSGPPRCSSLQAPIMLLSGHEGEVYCCKFHP-WGNTLASAGFDRLILLWNVYGDCD-N 128
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324
GHS +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN
Sbjct: 129 YAT--LKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVN 182
>DICTYBASE|DDB_G0269388 [details] [associations]
symbol:corB "coronin 7" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IEA;IDA]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031276
"negative regulation of lateral pseudopodium assembly"
evidence=IMP] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030864 "cortical actin cytoskeleton"
evidence=IDA] [GO:0030835 "negative regulation of actin filament
depolymerization" evidence=IDA] [GO:0009617 "response to bacterium"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IEA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0001667 "ameboidal cell migration" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269388 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030866 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006909 GO:GO:0051015 GO:GO:0042995
GO:GO:0001891 GO:GO:0030864 GO:GO:0031589 GO:GO:0001667
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 OMA:EVEFARC RefSeq:XP_645927.1
ProteinModelPortal:Q55E54 EnsemblProtists:DDB0232260 GeneID:8616868
KEGG:ddi:DDB_G0269388 ProtClustDB:CLSZ2730920 GO:GO:0031276
Uniprot:Q55E54
Length = 962
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 36/124 (29%), Positives = 55/124 (44%)
Query: 221 PLVKFGGHKDEGYAI----------DWNPITTGRLVTGDCNSCIYLW---EPASDATWNV 267
PL FG K E + I ++NP +LVT +S I +W E ++
Sbjct: 58 PLKSFGKRKGETFLIHAHSSGVIDFEFNPFNEHQLVTASDDSTIKVWNIDEAIRSGATSL 117
Query: 268 DPNPFI--GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV 325
+ GHS SVE + ++P ++ ASCS D + IWD G+ S+ +
Sbjct: 118 SSASIVCSGHSKSVECIAFNPVANNILASCSADKTLKIWDLSNGEEKY-SWNFEQGSLTS 176
Query: 326 ISWN 329
+SWN
Sbjct: 177 LSWN 180
>FB|FBgn0024509 [details] [associations]
symbol:Sec13 "Sec13 ortholog (S. cerevisiae)" species:7227
"Drosophila melanogaster" [GO:0006900 "membrane budding"
evidence=ISS] [GO:0008363 "larval chitin-based cuticle development"
evidence=IMP] [GO:0035293 "chitin-based larval cuticle pattern
formation" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0031080 "nuclear pore outer ring"
evidence=ISS] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0010629 GO:GO:0007184 GO:GO:0035293 EMBL:AF160909
ProteinModelPortal:Q7KLW8 STRING:Q7KLW8 PaxDb:Q7KLW8 PRIDE:Q7KLW8
FlyBase:FBgn0024509 InParanoid:Q7KLW8 OrthoDB:EOG46T1H2
ArrayExpress:Q7KLW8 Bgee:Q7KLW8 Uniprot:Q7KLW8
Length = 386
Score = 117 (46.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE--P-DVFASCSVDGH 300
RLV+G C++ + +W +D W V+ + HS V D+ W+P+ P A+ S D H
Sbjct: 212 RLVSGGCDNLVKIWREDNDR-W-VEEHRLEAHSDWVRDVAWAPSIGLPRSQIATASQDRH 269
Query: 301 IAIWDTRVGKSALTSFKAHNADVNV--ISWN 329
+ +W + S TS H D V ISW+
Sbjct: 270 VIVWSSNADLSEWTSTVLHTFDDAVWSISWS 300
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAP- 214
+LQ H+ V+ A+ + A+ + G V+++ R + ALAE + G P
Sbjct: 34 LLQEIDTEHEDMVHHA-ALDFYGLLLATCSSDGSVRIFHSRKNNKALAE---LKGHQGPV 89
Query: 215 -QVSNQSPLVKFG 226
QV+ P KFG
Sbjct: 90 WQVAWAHP--KFG 100
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 39/129 (30%), Positives = 59/129 (45%)
Query: 182 ASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241
AS +D V++W R +L +E V S + G H Y + W +T
Sbjct: 210 ASCSDDRTVRIW--RQYLPG---NEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLT 264
Query: 242 TGRLVTGDCNSCIYLWE--PASDA---TWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS 296
G L T + I ++E P SD T+++ + HS V + W+P EP + ASCS
Sbjct: 265 -GALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCS 323
Query: 297 VDGHIAIWD 305
DG +A W+
Sbjct: 324 DDGEVAFWE 332
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 38/116 (32%), Positives = 57/116 (49%)
Query: 213 APQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLW--EPASDATWNVDPN 270
AP + S F GH+D +D++ I T +L +G +SC+ +W +P S A
Sbjct: 3 APCAEDPSLERHFKGHRDAVTCVDFS-INTKQLASGSMDSCLMVWHMKPQSRAY------ 55
Query: 271 PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326
F GH +V + +SP+ + AS S D + IW V K T F+AH A V +
Sbjct: 56 RFTGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNV-KGESTVFRAHTATVRSV 109
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
+VT + + L++P ++ ++ N ++GH+A V+ + WS TE +F S + D +W
Sbjct: 310 IVTASADKNLRLYDPRTNQG-SIVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 368
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 369 DCRSPKAPLYDLLGHGEKVLDIDWS 393
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 28/92 (30%), Positives = 40/92 (43%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVDGH 300
R +G C++ I LW+ D W + HS V D+ W+P+ ASCS DG
Sbjct: 181 RFASGGCDNLIKLWKEEEDGQWK-EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR 239
Query: 301 IAIWDTRVGKSALTSFKAHNADVNVISWNRCW 332
+ IW S S K + N + W+ W
Sbjct: 240 VFIWTCDDASSNTWSPKLLHK-FNDVVWHVSW 270
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 33/103 (32%), Positives = 52/103 (50%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286
GH + ++DW+P T LV+G + + LW DA + F GH V+ ++W+
Sbjct: 89 GHGWDVKSVDWHP-TKSLLVSGGKDYLVKLW----DAKSGRELRSFHGHKNIVQCVKWNQ 143
Query: 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
V + S D I ++D R K L SF+ HN DV ++W+
Sbjct: 144 NGNWVLTA-SKDQIIKLYDIRSMKE-LESFRGHNKDVTALAWH 184
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLW--EPASDATWNVDPNPFI-GHSASVEDLQW 284
HK ++ W P T+ L G +S + +W E ++D T+ +D I GH V+ + W
Sbjct: 57 HKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW 115
Query: 285 SPTEPDVFASCSVDGHIAIWDT-RVGKS--ALTSFKAHNADVNVISWN 329
S + A+CS D + IW+T G+ ++ + H+ DV + W+
Sbjct: 116 S-NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 34/128 (26%), Positives = 64/128 (50%)
Query: 207 TIVGQGAPQVSN---QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASD- 262
TI G G + N ++ F H GY + WNP G LVTG ++ + + + ++
Sbjct: 118 TINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNK 177
Query: 263 ATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322
T+ D I V D++W ++FAS S D H+ ++D R K ++ + A +++
Sbjct: 178 TTFKSDIQKDI-----VNDVKWHQFNGNLFASVSEDSHVYLFDARDNK-VVSQYYAESSN 231
Query: 323 -VNVISWN 329
+N ++++
Sbjct: 232 GINSLAFS 239
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 34/128 (26%), Positives = 64/128 (50%)
Query: 207 TIVGQGAPQVSN---QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASD- 262
TI G G + N ++ F H GY + WNP G LVTG ++ + + + ++
Sbjct: 118 TINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNK 177
Query: 263 ATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322
T+ D I V D++W ++FAS S D H+ ++D R K ++ + A +++
Sbjct: 178 TTFKSDIQKDI-----VNDVKWHQFNGNLFASVSEDSHVYLFDARDNK-VVSQYYAESSN 231
Query: 323 -VNVISWN 329
+N ++++
Sbjct: 232 GINSLAFS 239
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 233 YAIDWNPITTGRLVTGDCNSCIYLWEPASDAT---WNVDPNPFIGHSASVEDLQWSPTEP 289
Y+IDW+ +T +VTG + I +E SD T + + H + V +W+P
Sbjct: 255 YSIDWSSLTN-TIVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFK 313
Query: 290 DVFASCSVDGHIAIWD 305
++ ASC DG I IW+
Sbjct: 314 NILASCGDDGFIKIWE 329
>MGI|MGI:2183448 [details] [associations]
symbol:Coro6 "coronin 6" species:10090 "Mus musculus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2183448 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 EMBL:AL607072
GeneTree:ENSGT00550000074317 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 ChiTaRS:CORO6 EMBL:AB070894
EMBL:AB070895 EMBL:AB070896 EMBL:AK158179 IPI:IPI00120764
IPI:IPI00263646 IPI:IPI00648746 IPI:IPI00974745 RefSeq:NP_624354.1
RefSeq:NP_624355.1 RefSeq:NP_624356.1 UniGene:Mm.33477
ProteinModelPortal:Q920M5 SMR:Q920M5 PhosphoSite:Q920M5
PaxDb:Q920M5 PRIDE:Q920M5 Ensembl:ENSMUST00000021190
Ensembl:ENSMUST00000079770 Ensembl:ENSMUST00000102493
Ensembl:ENSMUST00000108390 Ensembl:ENSMUST00000108391 GeneID:216961
KEGG:mmu:216961 UCSC:uc007kgq.1 UCSC:uc007kgr.1 UCSC:uc007kgs.1
OMA:PFYDADS NextBio:375460 Bgee:Q920M5 CleanEx:MM_CORO6
Genevestigator:Q920M5 GermOnline:ENSMUSG00000020836 Uniprot:Q920M5
Length = 471
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNVDPNPFI 273
+V PLV GH IDW P + + ++ + +W+ P N+ P I
Sbjct: 69 RVDKNYPLVT--GHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNIT-EPVI 125
Query: 274 ---GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
GHS V L W PT +V S D I IW+ G+ L+ H ++ + WN
Sbjct: 126 TLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHSVCWN 184
>UNIPROTKB|Q6QEF8 [details] [associations]
symbol:CORO6 "Coronin-6" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 EMBL:AC104564 HOGENOM:HOG000166356 HOVERGEN:HBG059978
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 HSSP:O89053
EMBL:AF193039 EMBL:AF447884 EMBL:AF447885 EMBL:AY545070
EMBL:AK027777 EMBL:AK096431 EMBL:BC064514 IPI:IPI00034860
IPI:IPI00783124 IPI:IPI00789933 IPI:IPI00791485 IPI:IPI00903139
RefSeq:NP_116243.2 UniGene:Hs.143046 ProteinModelPortal:Q6QEF8
SMR:Q6QEF8 STRING:Q6QEF8 PhosphoSite:Q6QEF8 DMDM:119369490
PaxDb:Q6QEF8 PRIDE:Q6QEF8 DNASU:84940 Ensembl:ENST00000345068
Ensembl:ENST00000388767 Ensembl:ENST00000445145
Ensembl:ENST00000456796 GeneID:84940 KEGG:hsa:84940 UCSC:uc002hel.2
UCSC:uc002hem.3 CTD:84940 GeneCards:GC17M027941 H-InvDB:HIX0013675
HGNC:HGNC:21356 HPA:HPA021556 neXtProt:NX_Q6QEF8
PharmGKB:PA134869901 ChiTaRS:CORO6 GenomeRNAi:84940 NextBio:75402
ArrayExpress:Q6QEF8 Bgee:Q6QEF8 CleanEx:HS_CORO6
Genevestigator:Q6QEF8 GermOnline:ENSG00000167549 Uniprot:Q6QEF8
Length = 472
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 35/119 (29%), Positives = 50/119 (42%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNVDPNPFI 273
+V PLV GH IDW P + + ++ I +W+ P N+ P I
Sbjct: 69 RVDKNYPLVT--GHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNIT-EPII 125
Query: 274 ---GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
GHS V L W PT +V S D I IW+ G+ L+ H ++ + WN
Sbjct: 126 TLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCWN 184
>RGD|708560 [details] [associations]
symbol:Coro6 "coronin 6" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:708560 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 OMA:PFYDADS EMBL:AF140359
EMBL:BC098656 IPI:IPI00200600 RefSeq:NP_620815.2 UniGene:Rn.28432
ProteinModelPortal:Q920J3 SMR:Q920J3 PhosphoSite:Q920J3
PRIDE:Q920J3 Ensembl:ENSRNOT00000019759 GeneID:245982
KEGG:rno:245982 InParanoid:Q920J3 NextBio:623280
ArrayExpress:Q920J3 Genevestigator:Q920J3
GermOnline:ENSRNOG00000014496 Uniprot:Q920J3
Length = 472
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNVDPNPFI 273
+V PLV GH IDW P + + ++ + +W+ P N+ P I
Sbjct: 69 RVDKNYPLVT--GHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNIT-EPVI 125
Query: 274 ---GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
GHS V L W PT +V S D I IW+ G+ L+ H ++ + WN
Sbjct: 126 TLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHSVCWN 184
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 32/115 (27%), Positives = 50/115 (43%)
Query: 219 QSPLVKFGGHKDEGYAIDWNPITTGR-LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA 277
++PL GHK+ + W+P G+ LV+G + I W P ++ +P GH
Sbjct: 141 ETPLFTCKGHKNWVLTVAWSP--DGKHLVSGSKSGEICCWNPKKG---ELEGSPLTGHKK 195
Query: 278 SVEDLQWSP---TEP-DVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
+ + W P + P F + S DG IWD + KS + H V + W
Sbjct: 196 WITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIIC-LSGHTLAVTCVKW 249
>MGI|MGI:1917715 [details] [associations]
symbol:Wdr77 "WD repeat domain 77" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IGI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1917715 GO:GO:0005634 GO:GO:0005794 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0006357
GO:GO:0060770 GO:GO:0030374 GO:GO:0060528 CTD:79084
HOGENOM:HOG000035094 HOVERGEN:HBG052458 KO:K13221 OrthoDB:EOG4MPHQT
OMA:MRKETPP EMBL:AK012014 EMBL:AK032897 EMBL:AK048488 EMBL:AK050391
EMBL:AK163839 EMBL:AK169128 EMBL:BC005755 IPI:IPI00114819
RefSeq:NP_081708.1 UniGene:Mm.5110 ProteinModelPortal:Q99J09
SMR:Q99J09 IntAct:Q99J09 STRING:Q99J09 PhosphoSite:Q99J09
PaxDb:Q99J09 PRIDE:Q99J09 Ensembl:ENSMUST00000010278 GeneID:70465
KEGG:mmu:70465 UCSC:uc008qvo.1 GeneTree:ENSGT00390000010711
InParanoid:Q99J09 ChiTaRS:WDR77 NextBio:331685 Bgee:Q99J09
CleanEx:MM_WDR77 Genevestigator:Q99J09
GermOnline:ENSMUSG00000000561 Uniprot:Q99J09
Length = 342
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 218 NQSPLV-KFGGHKDEGYAIDWNPITTG-RLVTGDCNSCIYLWEPASDATWNVDPNPFIGH 275
N++ +V KF ++ + +++G + V+G + CI +W+ A V N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSTVTVLSSGTQAVSGSKDCCIKIWDLAQQ----VSLNSYRAH 166
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAV 335
+ V + SP + VF SCS D I +WDTR K A S A NA + + A+
Sbjct: 167 AGQVTCVAASPHKDSVFLSCSEDSRILLWDTRCPKPA--SQMACNASGYLPT------AL 218
Query: 336 CWHLEVMMEHFLF 348
WH + E F+F
Sbjct: 219 AWHPQ-QSEVFVF 230
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 116 (45.9 bits), Expect = 0.00047, P = 0.00047
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
++T + + L++P ++ +V N ++GH+A V+ + WS TE +F S + D +W
Sbjct: 307 ILTASADKNLRLYDPRTNQG-SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 366 DCRSPKAPLYDLLGHGEKVLDIDWS 390
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 116 (45.9 bits), Expect = 0.00047, P = 0.00047
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
++T + + L++P ++ +V N ++GH+A V+ + WS TE +F S + D +W
Sbjct: 307 ILTASADKNLRLYDPRTNQG-SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 366 DCRSPKAPLYDLLGHGEKVLDIDWS 390
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 116 (45.9 bits), Expect = 0.00047, P = 0.00047
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
++T + + L++P ++ +V N ++GH+A V+ + WS TE +F S + D +W
Sbjct: 307 ILTASADKNLRLYDPRTNQG-SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 366 DCRSPKAPLYDLLGHGEKVLDIDWS 390
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 114 (45.2 bits), Expect = 0.00049, P = 0.00049
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVDGH 300
R V+G C++ + LW+ D W D HS V D+ W+P+ ASCS DG
Sbjct: 181 RFVSGGCDNLVKLWKE-EDGQWKEDQK-LEAHSDWVRDVGWAPSIGLPTSTIASCSQDGR 238
Query: 301 IAIW--DTRVGKSALTSFKAHNADVNVISWNRCW 332
+ IW D G + T+ H N + W+ W
Sbjct: 239 VFIWTCDDPAGNT-WTAKLLHK--FNDVVWHVSW 269
>WB|WBGene00018893 [details] [associations]
symbol:tag-345 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005654 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035
GO:GO:0040019 GO:GO:0070545 GO:GO:0000463 GO:GO:0007276
InterPro:IPR012972 Pfam:PF08154 EMBL:FO081477 KO:K14863
HAMAP:MF_03029 GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844
PIR:T29587 RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 234 AIDWNPITTGRLVTGDCNSCI-YLWEPASDATWNVDPNPFIGHSAS-VEDLQWSPTEPDV 291
+ID +P + L+ C I L++P + ++ FIGH VE ++W+P + +
Sbjct: 326 SIDLHPKSD--LLISSCTDAIPRLYDP-KNRDGSMVKQSFIGHQNGWVEAVKWNPLDTNQ 382
Query: 292 FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLA 334
F S S D +WD R KS+L H+ + +WN +A
Sbjct: 383 FVSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNEGLIA 425
>UNIPROTKB|P91343 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6239 "Caenorhabditis elegans" [GO:0070545 "PeBoW complex"
evidence=ISS] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0005654
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040019
GO:GO:0070545 GO:GO:0000463 GO:GO:0007276 InterPro:IPR012972
Pfam:PF08154 EMBL:FO081477 KO:K14863 HAMAP:MF_03029
GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844 PIR:T29587
RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 234 AIDWNPITTGRLVTGDCNSCI-YLWEPASDATWNVDPNPFIGHSAS-VEDLQWSPTEPDV 291
+ID +P + L+ C I L++P + ++ FIGH VE ++W+P + +
Sbjct: 326 SIDLHPKSD--LLISSCTDAIPRLYDP-KNRDGSMVKQSFIGHQNGWVEAVKWNPLDTNQ 382
Query: 292 FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLA 334
F S S D +WD R KS+L H+ + +WN +A
Sbjct: 383 FVSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNEGLIA 425
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVE--DL 282
F GH + YAI ++P LV+G + ++LW+ S P HS V D+
Sbjct: 257 FIGHHNYVYAIAFSP-KGNMLVSGSYDEAVFLWDVRSARVMKSLP----AHSDPVSGIDV 311
Query: 283 QWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
W T + ASC+ DG + IWDT G+ T N V+ + ++
Sbjct: 312 VWDGT---LIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFS 355
>SGD|S000006168 [details] [associations]
symbol:YPL247C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000006168 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BK006949 EMBL:Z67751 eggNOG:NOG314410
HOGENOM:HOG000260968 KO:K11805 GeneTree:ENSGT00390000006939
OrthoDB:EOG48PQTZ EMBL:Z73603 PIR:S61017 RefSeq:NP_015077.1
ProteinModelPortal:Q12523 SMR:Q12523 DIP:DIP-6366N IntAct:Q12523
MINT:MINT-685692 STRING:Q12523 PaxDb:Q12523 PeptideAtlas:Q12523
PRIDE:Q12523 EnsemblFungi:YPL247C GeneID:855829 KEGG:sce:YPL247C
CYGD:YPL247c OMA:NTFPPVT NextBio:980386 Genevestigator:Q12523
GermOnline:YPL247C Uniprot:Q12523
Length = 523
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 44/150 (29%), Positives = 65/150 (43%)
Query: 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP 221
+AH V +R +T++ + AS G V+V+DLRS LA S I + VS +
Sbjct: 284 IAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLRS----LAHSTIIYEPPSSSVSGATA 339
Query: 222 --LVKFGGHKDEGYAIDWNPITTGRLVT--GDCNSCIYL--WEPASDATWNVDPNPFIGH 275
+ D ++ +P L T D N I L P S N+ GH
Sbjct: 340 GTITPSSKGSDALLRLEPSPYDPNVLATFAADSNKIIILDMRNPESPIL-NLQ-----GH 393
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWD 305
+SV ++W PT+ +V SC D + WD
Sbjct: 394 GSSVNGIKWHPTKRNVLLSCGDDCQVLYWD 423
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
++T + + L++P ++ +V N ++GH+A V+ + WS TE +F S + D +W
Sbjct: 307 ILTASADKNLRLYDPRTNQG-SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 366 DCRSPKAPLYDLLGHGDKVLDIDWS 390
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304
++T + + L++P ++ +V N ++GH+A V+ + WS TE +F S + D +W
Sbjct: 307 ILTASADKNLRLYDPRTNQG-SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 305 DTRVGKSALTSFKAHNADVNVISWN 329
D R K+ L H V I W+
Sbjct: 366 DCRSPKAPLYDLLGHGDKVLDIDWS 390
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294
I ++P+ RL +G + + LW+P S ++ HS V ++W+P+ S
Sbjct: 303 ISYSPLCR-RLASGSTDRHVRLWDPRSK-DGSLVLLSLTSHSGWVTAVKWAPSHEHQLVS 360
Query: 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW 328
S+D + +WDTR K+ L AH V + W
Sbjct: 361 GSLDNLVKLWDTRSCKAPLYDVSAHEDKVLCVDW 394
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GH ++ W+P G+L C + I +W + W GH+ ++ +L W
Sbjct: 12 GHAGRVWSAAWHP--GGKLFAS-CGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAW 68
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWNRCW--LAVC 336
S AS S D +A+WD + G+ + + H+ +V ++W+R LA C
Sbjct: 69 SCCG-HYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATC 122
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 114 (45.2 bits), Expect = 0.00075, P = 0.00075
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLW--EPASDATWNVDPNPFIGHSASVEDL 282
F GH+D ++D++ + T +L +G +SC+ +W +P S A F GH +V +
Sbjct: 15 FKGHRDAITSVDFS-LNTKQLASGSMDSCLMVWHMKPQSRAY------RFAGHKDAVTCV 67
Query: 283 QWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326
+SP+ + AS S D + IW V K T F+AH A V +
Sbjct: 68 NFSPSG-HLLASGSRDKTVRIWIPNV-KGESTVFRAHTATVRSV 109
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 34/104 (32%), Positives = 46/104 (44%)
Query: 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWS 285
G HK +A+ WN L G + I +W DA+ F HSA D+ W
Sbjct: 448 GQHKGPIFALKWNKCGNYILSAGVDKTTI-IW----DASTGQCTQQFAFHSAPALDVDWQ 502
Query: 286 PTEPDVFASCSVDGHIAIWDTRVG-KSALTSFKAHNADVNVISW 328
+ FASCS D I + R+G + +FK H +VN I W
Sbjct: 503 TNQ--AFASCSTDQRIHV--CRLGVNEPIKTFKGHTNEVNAIKW 542
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 180 ICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-HKDEGYAIDWN 238
I A D G + +WD LA S+ G G+ +QS L+ G H +ID+N
Sbjct: 86 IIAGAMDNGTINLWD---PTKILA-SDATDGGGS---DDQSSLIGVGQRHSGPVQSIDFN 138
Query: 239 PITTGRLVTGDCNSCIYLWEPASDATWN--VDPNPFIGHSASVEDLQWSPTEPDVFASCS 296
L +G +S +++W+ SD T ++P S+ + + W+ + S S
Sbjct: 139 VQNPNLLASGGSDSEVFIWD-LSDPTQPSALNPGSKSQQSSDITCVAWNKKVAHILGSAS 197
Query: 297 VDGHIAIWDTRVGKSALT 314
+G+I IWD + K+ +T
Sbjct: 198 YNGYIVIWDLKSKKTLMT 215
>POMBASE|SPAC23C4.02 [details] [associations]
symbol:crn1 "actin binding protein, coronin Crn1"
species:4896 "Schizosaccharomyces pombe" [GO:0003779 "actin
binding" evidence=ISS] [GO:0005826 "actomyosin contractile ring"
evidence=IDA] [GO:0030036 "actin cytoskeleton organization"
evidence=ISS] [GO:0030041 "actin filament polymerization"
evidence=NAS] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0030479 "actin cortical patch" evidence=IDA] [GO:0035838
"growing cell tip" evidence=IDA] [GO:0043234 "protein complex"
evidence=NAS] [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0051017 "actin filament bundle assembly" evidence=NAS]
[GO:0051286 "cell tip" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC23C4.02 GO:GO:0003779
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030479 GO:GO:0051017 GO:GO:0030041 GO:GO:0030139
GO:GO:0005826 GO:GO:0035838 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 PIR:T38258 RefSeq:NP_593175.1
ProteinModelPortal:O13923 STRING:O13923 PRIDE:O13923
EnsemblFungi:SPAC23C4.02.1 GeneID:2541961 KEGG:spo:SPAC23C4.02
OMA:LQDRRIA OrthoDB:EOG4TJ02B NextBio:20803045 Uniprot:O13923
Length = 601
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV---DPNPFI---GHSAS 278
F GH DWNP L +G +S I +W+ D T D +P GHS
Sbjct: 77 FRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRK 136
Query: 279 VEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309
V +Q+ PT +V AS S D I +WD G
Sbjct: 137 VGLVQYHPTAANVLASSSADNTIKLWDCEKG 167
>FB|FBgn0033526 [details] [associations]
symbol:Caf1-105 "Caf1-105" species:7227 "Drosophila
melanogaster" [GO:0006333 "chromatin assembly or disassembly"
evidence=ISS] [GO:0006334 "nucleosome assembly" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
eggNOG:COG2319 GeneTree:ENSGT00550000074968 KO:K10751
RefSeq:NP_610589.2 UniGene:Dm.4362 ProteinModelPortal:A1Z898
SMR:A1Z898 STRING:A1Z898 PaxDb:A1Z898 PRIDE:A1Z898
EnsemblMetazoa:FBtr0088310 GeneID:36107 KEGG:dme:Dmel_CG12892
UCSC:CG12892-RA CTD:36107 FlyBase:FBgn0033526 InParanoid:A1Z898
OMA:PIAFRRK OrthoDB:EOG476HFQ PhylomeDB:A1Z898 GenomeRNAi:36107
NextBio:796901 Bgee:A1Z898 Uniprot:A1Z898
Length = 747
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 45/175 (25%), Positives = 73/175 (41%)
Query: 176 QNPHIC--ASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233
++P IC AS HV +W ++N ++E + + A +S V
Sbjct: 29 RSPTICRLASGGSDAHVLIW----YVNRSDDAEGVDVELAADLSRHQRAVN--------- 75
Query: 234 AIDWNPITTGRLV-TGDCNSCIYLWEPASD-ATWNV---------DPNPFI------GHS 276
A+ W+P G L+ +GD S +++W+ +D N+ D ++ GH
Sbjct: 76 AVRWSP--NGELLASGDDESVVFIWKQKADHEVVNIVDADGCSEQDKEVWLTLKVLRGHR 133
Query: 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRC 331
+ DL W+P S SVD +WD GKS L H V ++W+ C
Sbjct: 134 EDIYDLSWAPNS-QFLVSGSVDNTAMLWDVHSGKS-LAILDDHKGYVQGVAWDPC 186
>UNIPROTKB|A6QLZ8 [details] [associations]
symbol:CORO6 "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
CTD:84940 OMA:PFYDADS EMBL:DAAA02048621 EMBL:BC148144
IPI:IPI00685662 RefSeq:NP_001095752.1 UniGene:Bt.6619 SMR:A6QLZ8
Ensembl:ENSBTAT00000001490 GeneID:614661 KEGG:bta:614661
NextBio:20899219 Uniprot:A6QLZ8
Length = 431
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI- 273
+V PLV GH IDW P + + ++ I +W+ P I
Sbjct: 69 RVDKNYPLVT--GHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPVRSITEPIIT 126
Query: 274 --GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
GHS V L W PT +V S D I IW+ G+ L+ H ++ + WN
Sbjct: 127 LEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCWN 184
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00083
Identities = 25/96 (26%), Positives = 43/96 (44%)
Query: 235 IDWNPITTGRL-VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293
+ W+P + N +W A ++ N GHS ++ D+ ++P PDV A
Sbjct: 73 VQWSPHPAKPYWIVSTSNQKAIIWNLAKSSS-NAIEFVLHGHSRAITDINFNPQHPDVLA 131
Query: 294 SCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
+CSVD ++ WD R S + + + + WN
Sbjct: 132 TCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWN 167
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 112 (44.5 bits), Expect = 0.00085, P = 0.00084
Identities = 43/149 (28%), Positives = 61/149 (40%)
Query: 187 TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246
TG Q W+++ NA TI G VS +P V G D+ N I +
Sbjct: 135 TGEGQ-WEVKKINNA----HTI---GCNAVS-WAPAVVPGSLIDQPSGQKPNYIK--KFA 183
Query: 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVDGHIAI 303
+G C++ I LW D W + HS V D+ W+P+ ASCS DG + I
Sbjct: 184 SGGCDNLIKLWREEEDGQWK-EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242
Query: 304 WDTRVGKSALTSFKAHNADVNVISWNRCW 332
W + S K + N + W+ W
Sbjct: 243 WTCDDASGNMWSPKLLHK-FNDVVWHVSW 270
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 112 (44.5 bits), Expect = 0.00085, P = 0.00084
Identities = 43/149 (28%), Positives = 61/149 (40%)
Query: 187 TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246
TG Q W+++ NA TI G VS +P V G D+ N I +
Sbjct: 135 TGEGQ-WEVKKINNA----HTI---GCNAVS-WAPAVVPGSLIDQPSGQKPNYIK--KFA 183
Query: 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVDGHIAI 303
+G C++ I LW D W + HS V D+ W+P+ ASCS DG + I
Sbjct: 184 SGGCDNLIKLWREEEDGQWK-EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242
Query: 304 WDTRVGKSALTSFKAHNADVNVISWNRCW 332
W + S K + N + W+ W
Sbjct: 243 WTCDDASGNMWSPKLLHK-FNDVVWHVSW 270
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 32/115 (27%), Positives = 48/115 (41%)
Query: 227 GHKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284
GH+D +++ W+P G V C + I +W D W GH ++ L W
Sbjct: 3 GHEDRVWSVAWSP--NG-FVLASCGGDKTIRIWGKEGDK-WICKTILEDGHQRTIRSLGW 58
Query: 285 SPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNADVNVISWN--RCWLAVC 336
SP AS S D IWD + G+ + + H +V + W+ LA C
Sbjct: 59 SPCGT-FLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATC 112
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 112 (44.5 bits), Expect = 0.00088, P = 0.00087
Identities = 33/124 (26%), Positives = 53/124 (42%)
Query: 184 WADTGHVQVWDLR-SHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242
W + + W + H + T V + S +++ GH+ E ++ WN +
Sbjct: 48 WEQSSLTRSWTCKLGHRLGSFDGNTCVWENFATDSESVSVLR--GHESEVKSVSWNA-SG 104
Query: 243 GRLVTGDCNSCIYLWE--PASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH 300
L T + +++WE P D ++ GHS V+ + W PT DV SCS D
Sbjct: 105 SLLATCGRDKSVWIWEIQPEEDDEFDTIA-VLTGHSEDVKMVLWHPTM-DVLFSCSYDNT 162
Query: 301 IAIW 304
I IW
Sbjct: 163 IKIW 166
>UNIPROTKB|F1MJS7 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
EMBL:DAAA02057282 IPI:IPI00713947 UniGene:Bt.720
ProteinModelPortal:F1MJS7 Ensembl:ENSBTAT00000025300 Uniprot:F1MJS7
Length = 790
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 49/191 (25%), Positives = 80/191 (41%)
Query: 152 SGTPILQLRKVAHQGCVNRIRAMT-QNPHICASWADTGHVQVW-DLRSHLNALAESETIV 209
+G I ++ + + V ++ + P + S AD VW + +L A A + +V
Sbjct: 44 AGRSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADV----VWHQMDENLLATAATNGVV 99
Query: 210 ---GQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN 266
G P + Q L F HK + ++P L++G + + + D
Sbjct: 100 VTWNLGRPSRNKQDQL--FTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCF----DLRRK 153
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326
+ F G S SV D+Q+S + FAS +G++ +WD R F AHN V
Sbjct: 154 DSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCC 213
Query: 327 SWN---RCWLA 334
W+ R WLA
Sbjct: 214 DWHPEDRGWLA 224
>UNIPROTKB|F1RG37 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
EMBL:FP016225 RefSeq:XP_003124754.1 Ensembl:ENSSSCT00000008775
GeneID:100510897 KEGG:ssc:100510897 Uniprot:F1RG37
Length = 790
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 49/191 (25%), Positives = 80/191 (41%)
Query: 152 SGTPILQLRKVAHQGCVNRIRAMT-QNPHICASWADTGHVQVW-DLRSHLNALAESETIV 209
+G I ++ + + V ++ + P + S AD VW + +L A A + +V
Sbjct: 44 AGRSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADV----VWHQMDENLLATAATNGVV 99
Query: 210 ---GQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN 266
G P + Q L F HK + ++P L++G + + + D
Sbjct: 100 VTWNLGRPSRNKQDQL--FTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCF----DLRRK 153
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326
+ F G S SV D+Q+S + FAS +G++ +WD R F AHN V
Sbjct: 154 DSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCC 213
Query: 327 SWN---RCWLA 334
W+ R WLA
Sbjct: 214 DWHPEDRGWLA 224
>MGI|MGI:2446285 [details] [associations]
symbol:Wdr24 "WD repeat domain 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005777
"peroxisome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2446285 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
HOGENOM:HOG000234392 HOVERGEN:HBG080644 OMA:HALYDSR
OrthoDB:EOG48WC1D EMBL:BC037651 IPI:IPI00229321 RefSeq:NP_776102.1
UniGene:Mm.95512 ProteinModelPortal:Q8CFJ9 SMR:Q8CFJ9
PhosphoSite:Q8CFJ9 PaxDb:Q8CFJ9 PRIDE:Q8CFJ9
Ensembl:ENSMUST00000026833 GeneID:268933 KEGG:mmu:268933
UCSC:uc008bcd.2 InParanoid:Q8CFJ9 NextBio:392587 Bgee:Q8CFJ9
CleanEx:MM_WDR24 Genevestigator:Q8CFJ9
GermOnline:ENSMUSG00000025737 Uniprot:Q8CFJ9
Length = 790
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 49/191 (25%), Positives = 80/191 (41%)
Query: 152 SGTPILQLRKVAHQGCVNRIRAMT-QNPHICASWADTGHVQVW-DLRSHLNALAESETIV 209
+G I ++ + + V ++ + P + S AD VW + +L A A + +V
Sbjct: 44 AGRSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADV----VWHQMDENLLATAATNGVV 99
Query: 210 ---GQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN 266
G P + Q L F HK + ++P L++G + + + D
Sbjct: 100 VTWNLGRPSRNKQDQL--FTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCF----DLRRK 153
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326
+ F G S SV D+Q+S + FAS +G++ +WD R F AHN V
Sbjct: 154 DSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCC 213
Query: 327 SWN---RCWLA 334
W+ R WLA
Sbjct: 214 DWHPEDRGWLA 224
>UNIPROTKB|G3V8L0 [details] [associations]
symbol:Wdr24 "RCG32838" species:10116 "Rattus norvegicus"
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 EMBL:CH473948
GO:GO:0005053 PANTHER:PTHR22850:SF4 CTD:84219
GeneTree:ENSGT00650000093352 OMA:HALYDSR RefSeq:NP_001178013.1
UniGene:Rn.20330 ProteinModelPortal:G3V8L0
Ensembl:ENSRNOT00000026697 GeneID:360497 KEGG:rno:360497
RGD:1304803 NextBio:672978 Uniprot:G3V8L0
Length = 790
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 49/191 (25%), Positives = 80/191 (41%)
Query: 152 SGTPILQLRKVAHQGCVNRIRAMT-QNPHICASWADTGHVQVW-DLRSHLNALAESETIV 209
+G I ++ + + V ++ + P + S AD VW + +L A A + +V
Sbjct: 44 AGRSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADV----VWHQMDENLLATAATNGVV 99
Query: 210 ---GQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN 266
G P + Q L F HK + ++P L++G + + + D
Sbjct: 100 VTWNLGRPSRNKQDQL--FTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCF----DLRRK 153
Query: 267 VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326
+ F G S SV D+Q+S + FAS +G++ +WD R F AHN V
Sbjct: 154 DSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCC 213
Query: 327 SWN---RCWLA 334
W+ R WLA
Sbjct: 214 DWHPEDRGWLA 224
>UNIPROTKB|E2QSZ5 [details] [associations]
symbol:CORO1A "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051126 "negative regulation of actin nucleation"
evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0050918 "positive chemotaxis" evidence=IEA] [GO:0048873
"homeostasis of number of cells within a tissue" evidence=IEA]
[GO:0045335 "phagocytic vesicle" evidence=IEA] [GO:0043548
"phosphatidylinositol 3-kinase binding" evidence=IEA] [GO:0043029
"T cell homeostasis" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042102 "positive
regulation of T cell proliferation" evidence=IEA] [GO:0034097
"response to cytokine stimulus" evidence=IEA] [GO:0032796 "uropod
organization" evidence=IEA] [GO:0031589 "cell-substrate adhesion"
evidence=IEA] [GO:0030864 "cortical actin cytoskeleton"
evidence=IEA] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0030595 "leukocyte chemotaxis"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0007015 "actin filament
organization" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] [GO:0005884 "actin filament" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] [GO:0001845
"phagolysosome assembly" evidence=IEA] [GO:0001772 "immunological
synapse" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0045335 GO:GO:0007015 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 GO:GO:0034097
GO:GO:0005884 GO:GO:0030027 GO:GO:0006816 GO:GO:0001891
GO:GO:0030864 GO:GO:0030335 GO:GO:0048873 GO:GO:0042102
GO:GO:0031589 GO:GO:0050918 GO:GO:0043029 GO:GO:0030833
GO:GO:0001772 GO:GO:0030595 GO:GO:0051126 GO:GO:0001845 CTD:11151
GeneTree:ENSGT00550000074317 KO:K13882 OMA:FMALICE GO:GO:0032796
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 EMBL:AAEX03004406
RefSeq:XP_547069.3 Ensembl:ENSCAFT00000027103 GeneID:489949
KEGG:cfa:489949 NextBio:20863057 Uniprot:E2QSZ5
Length = 461
Score = 114 (45.2 bits), Expect = 0.00092, P = 0.00092
Identities = 33/126 (26%), Positives = 52/126 (41%)
Query: 215 QVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE-PASDATWNV-DPNPF 272
+V +P V GH I W P + +G + + +WE P T + +P
Sbjct: 69 RVDKNAPTVC--GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVT 126
Query: 273 I-GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWNR 330
+ GH+ V + W PT +V S D I +WD G + LT H + + W+R
Sbjct: 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSR 186
Query: 331 CWLAVC 336
+C
Sbjct: 187 DGALIC 192
>TAIR|locus:2153914 [details] [associations]
symbol:TTG1 "AT5G24520" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0010026 "trichome
differentiation" evidence=IMP] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032880 "regulation of protein localization"
evidence=RCA;IMP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0009957
"epidermal cell fate specification" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009733 GO:GO:0009723 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0032880
EMBL:AB010068 eggNOG:NOG314410 HOGENOM:HOG000260968 GO:GO:0009957
GO:GO:0010026 ProtClustDB:CLSN2682478 EMBL:AJ133743 EMBL:AJ251522
EMBL:AJ251523 EMBL:BT020231 EMBL:BT020513 EMBL:AK227211
IPI:IPI00520475 RefSeq:NP_197840.1 RefSeq:NP_851069.1
RefSeq:NP_851070.1 UniGene:At.28124 ProteinModelPortal:Q9XGN1
SMR:Q9XGN1 IntAct:Q9XGN1 STRING:Q9XGN1 PaxDb:Q9XGN1 PRIDE:Q9XGN1
EnsemblPlants:AT5G24520.1 EnsemblPlants:AT5G24520.2
EnsemblPlants:AT5G24520.3 GeneID:832523 KEGG:ath:AT5G24520
GeneFarm:3759 TAIR:At5g24520 InParanoid:Q9XGN1 OMA:RACANAV
PhylomeDB:Q9XGN1 Genevestigator:Q9XGN1 GermOnline:AT5G24520
Uniprot:Q9XGN1
Length = 341
Score = 112 (44.5 bits), Expect = 0.00094, P = 0.00094
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293
+ DWN + RL T ++ +W D +V I H V D+ W E VFA
Sbjct: 137 SFDWNDVEPKRLGTCSIDTTCTIW----DIEKSVVETQLIAHDKEVHDIAWG--EARVFA 190
Query: 294 SCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI--SWNRCWLAVCWHLEVMMEHFLFMIL 351
S S DG + I+D R + + +++ D ++ +WN+ L + ++M+ +IL
Sbjct: 191 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR--YMATILMDSNKVVIL 248
Query: 352 D 352
D
Sbjct: 249 D 249
>UNIPROTKB|F1S8D4 [details] [associations]
symbol:WDR77 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IEA]
[GO:0060528 "secretory columnal luminar epithelial cell
differentiation involved in prostate glandular acinus development"
evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006357 GO:GO:0060770
GO:GO:0030374 GO:GO:0060528 KO:K13221 OMA:MRKETPP
GeneTree:ENSGT00390000010711 EMBL:FP340442 RefSeq:XP_003355293.1
UniGene:Ssc.2373 Ensembl:ENSSSCT00000007438 GeneID:100156038
KEGG:ssc:100156038 Uniprot:F1S8D4
Length = 342
Score = 112 (44.5 bits), Expect = 0.00094, P = 0.00094
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 218 NQSPLV-KFGGHKDEGYAIDWNPITTG-RLVTGDCNSCIYLWEPASDATWNVDPNPFIGH 275
N++ +V KF ++ + + +++G + V+G + CI +W+ A N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSSVSVLSSGTQAVSGSKDFCIKVWDLAQQMVLN----SYRAH 166
Query: 276 SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNADVNVISWN 329
S V + SP + VF SCS D I +WDTR K A ++A ++W+
Sbjct: 167 SGQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGYRASGYLPTSLAWH 221
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 111 (44.1 bits), Expect = 0.00096, P = 0.00096
Identities = 36/159 (22%), Positives = 68/159 (42%)
Query: 175 TQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234
TQN + + D H +D A S+ ++ N LV GH+ +
Sbjct: 3 TQN--VDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQ 60
Query: 235 IDWNPITTGR-LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293
+ W G+ L + + + +W+ + +W++ + + GH SV + W+P E +
Sbjct: 61 VAWAHPKFGKILASASYDRKVIVWKEVGNNSWSII-HQYAGHELSVNSISWAPHEFGLSL 119
Query: 294 SC-SVDGHIAI--WDTRVGKSALTSFKAHNADVNVISWN 329
+C S DG + I ++ V + A + VN +SW+
Sbjct: 120 ACASSDGSVTIHNYNNNVWE-APQKIQVSQIGVNSVSWS 157
>FB|FBgn0022786 [details] [associations]
symbol:Hira "Hira" species:7227 "Drosophila melanogaster"
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0035041 "sperm chromatin decondensation"
evidence=IMP] [GO:0001673 "male germ cell nucleus" evidence=IDA]
[GO:0035042 "fertilization, exchange of chromosomal proteins"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0003682 GO:GO:0001673
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006336 GO:GO:0035042
KO:K11293 GeneTree:ENSGT00550000074919 CTD:7290 EMBL:AF031081
EMBL:AJ222709 EMBL:AF071881 EMBL:AY069414 EMBL:BT016167 PIR:A59246
RefSeq:NP_572401.2 UniGene:Dm.2141 ProteinModelPortal:O17468
SMR:O17468 IntAct:O17468 STRING:O17468 PaxDb:O17468
EnsemblMetazoa:FBtr0071070 GeneID:31680 KEGG:dme:Dmel_CG12153
FlyBase:FBgn0022786 InParanoid:O17468 OMA:KECKSER OrthoDB:EOG40VT4J
PhylomeDB:O17468 ChiTaRS:HIRA GenomeRNAi:31680 NextBio:774799
Bgee:O17468 GermOnline:CG12153 Uniprot:O17468
Length = 1047
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 274 GHSASVEDLQWSPTEPDVF-ASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329
GH V DL WSP DV+ ASCS+D + IWD + ++ + K H V +SW+
Sbjct: 127 GHDGDVLDLAWSPN--DVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWD 181
>UNIPROTKB|H0YLU1 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007186
EMBL:AC023906 HGNC:HGNC:4401 ChiTaRS:GNB5 EMBL:AC010674
Ensembl:ENST00000558519 Bgee:H0YLU1 Uniprot:H0YLU1
Length = 103
Score = 91 (37.1 bits), Expect = 0.00098, P = 0.00098
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 251 NSCIYLWEPASDAT---WNVDPNP----FIGHSASVEDLQWSPTEP-DVFASCSVDGHIA 302
NS + + + D T W+V+ F GH A V L +P+E + F S D
Sbjct: 20 NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 79
Query: 303 IWDTRVGKSALTSFKAHNADVNVI 326
+WD R G+ + +F+ H +D+N +
Sbjct: 80 VWDMRSGQ-CVQAFETHESDINSV 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 359 318 0.00083 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 224
No. of states in DFA: 628 (67 KB)
Total size of DFA: 282 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.47u 0.09s 23.56t Elapsed: 00:00:02
Total cpu time: 23.50u 0.09s 23.59t Elapsed: 00:00:02
Start: Sat May 11 02:11:29 2013 End: Sat May 11 02:11:31 2013
WARNINGS ISSUED: 1