Query 018235
Match_columns 359
No_of_seqs 478 out of 2927
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 12:03:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018235.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018235hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xyi_A Probable histone-bindin 100.0 1E-42 3.4E-47 332.8 22.7 282 29-356 20-310 (430)
2 4gqb_B Methylosome protein 50; 100.0 7.9E-29 2.7E-33 229.9 28.9 211 65-358 81-292 (344)
3 4gqb_B Methylosome protein 50; 100.0 1.6E-28 5.4E-33 227.9 26.5 205 66-357 127-333 (344)
4 3ow8_A WD repeat-containing pr 100.0 6.7E-28 2.3E-32 221.4 26.2 165 157-354 156-320 (321)
5 2ynn_A Coatomer subunit beta'; 100.0 1.5E-27 5E-32 217.1 27.8 206 66-358 55-262 (304)
6 2ynn_A Coatomer subunit beta'; 100.0 4.4E-27 1.5E-31 213.9 28.1 202 68-357 15-219 (304)
7 1vyh_C Platelet-activating fac 100.0 3.8E-27 1.3E-31 223.5 25.4 201 67-357 109-329 (410)
8 3ow8_A WD repeat-containing pr 100.0 1E-26 3.4E-31 213.5 26.5 171 154-357 111-281 (321)
9 1got_B GT-beta; complex (GTP-b 100.0 1.9E-26 6.7E-31 213.0 27.9 166 154-352 173-340 (340)
10 1vyh_C Platelet-activating fac 100.0 1.3E-26 4.3E-31 220.0 26.8 198 67-354 193-410 (410)
11 4g56_B MGC81050 protein; prote 100.0 1.1E-26 3.8E-31 216.4 25.4 171 159-358 133-304 (357)
12 4g56_B MGC81050 protein; prote 100.0 1.1E-26 3.9E-31 216.3 24.8 202 66-355 139-343 (357)
13 4ery_A WD repeat-containing pr 100.0 5.9E-26 2E-30 206.6 28.4 201 67-357 24-225 (312)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-26 5.2E-31 214.2 24.3 205 68-354 18-224 (345)
15 3frx_A Guanine nucleotide-bind 100.0 6E-26 2.1E-30 207.9 27.4 207 67-357 18-229 (319)
16 2xzm_R RACK1; ribosome, transl 100.0 1E-25 3.5E-30 208.3 28.9 169 156-355 67-244 (343)
17 1got_B GT-beta; complex (GTP-b 99.9 9.6E-26 3.3E-30 208.3 28.2 168 156-357 134-303 (340)
18 2hes_X YDR267CP; beta-propelle 99.9 3.5E-26 1.2E-30 210.5 24.9 171 164-355 57-230 (330)
19 2pm7_B Protein transport prote 99.9 6.6E-26 2.3E-30 205.5 26.1 208 68-356 11-239 (297)
20 2pbi_B Guanine nucleotide-bind 99.9 2.2E-25 7.5E-30 207.3 27.4 166 155-352 186-354 (354)
21 2pbi_B Guanine nucleotide-bind 99.9 3.8E-25 1.3E-29 205.7 27.3 208 66-356 64-272 (354)
22 4ery_A WD repeat-containing pr 99.9 3.1E-25 1.1E-29 201.8 25.7 171 154-357 12-182 (312)
23 3iz6_a 40S ribosomal protein R 99.9 7.8E-26 2.7E-30 212.2 21.8 216 66-357 66-282 (380)
24 3iz6_a 40S ribosomal protein R 99.9 1.5E-25 5E-30 210.4 22.6 165 162-357 202-377 (380)
25 2j04_B YDR362CP, TAU91; beta p 99.9 1.9E-25 6.6E-30 218.1 23.3 238 61-357 128-388 (524)
26 3f3f_A Nucleoporin SEH1; struc 99.9 5.6E-25 1.9E-29 200.8 24.9 220 67-357 12-339 (351)
27 4e54_B DNA damage-binding prot 99.9 1.3E-25 4.4E-30 214.4 20.6 171 156-357 155-329 (435)
28 3dm0_A Maltose-binding peripla 99.9 1E-24 3.5E-29 220.3 28.0 174 155-357 420-594 (694)
29 1nr0_A Actin interacting prote 99.9 6.6E-25 2.2E-29 218.6 26.2 189 158-357 52-272 (611)
30 3dwl_C Actin-related protein 2 99.9 6E-26 2E-30 211.6 16.9 209 67-357 12-238 (377)
31 3bg1_A Protein SEC13 homolog; 99.9 3E-25 1E-29 203.0 21.2 209 67-355 14-247 (316)
32 2hes_X YDR267CP; beta-propelle 99.9 6.6E-25 2.2E-29 202.0 23.5 213 66-356 58-281 (330)
33 3fm0_A Protein CIAO1; WDR39,SG 99.9 8.2E-25 2.8E-29 202.6 24.1 209 66-356 61-284 (345)
34 3frx_A Guanine nucleotide-bind 99.9 4.5E-25 1.6E-29 202.1 22.0 176 154-357 6-187 (319)
35 1erj_A Transcriptional repress 99.9 3.6E-24 1.2E-28 201.8 28.6 202 69-357 126-343 (393)
36 2xyi_A Probable histone-bindin 99.9 2.9E-24 9.8E-29 204.9 27.6 227 64-355 126-353 (430)
37 2pm7_B Protein transport prote 99.9 1.7E-24 5.7E-29 196.2 23.3 171 159-357 3-191 (297)
38 1erj_A Transcriptional repress 99.9 3.9E-24 1.3E-28 201.5 26.4 160 163-356 121-288 (393)
39 4h5i_A Guanine nucleotide-exch 99.9 5.7E-25 1.9E-29 205.4 20.4 166 162-355 173-343 (365)
40 2ymu_A WD-40 repeat protein; u 99.9 1.9E-24 6.6E-29 212.6 25.0 160 157-352 418-577 (577)
41 1nr0_A Actin interacting prote 99.9 2.9E-24 9.8E-29 214.0 25.5 166 160-357 142-357 (611)
42 1k8k_C P40, ARP2/3 complex 41 99.9 9.8E-24 3.3E-28 195.6 26.9 210 66-357 8-235 (372)
43 2aq5_A Coronin-1A; WD40 repeat 99.9 3.1E-24 1.1E-28 202.4 23.8 176 160-357 76-256 (402)
44 3jrp_A Fusion protein of prote 99.9 6E-24 2E-28 197.1 24.7 208 66-356 11-241 (379)
45 2xzm_R RACK1; ribosome, transl 99.9 2E-23 6.8E-28 192.9 27.6 199 67-357 77-287 (343)
46 2j04_B YDR362CP, TAU91; beta p 99.9 1.6E-24 5.6E-29 211.5 21.3 165 160-356 261-429 (524)
47 2pm9_A Protein WEB1, protein t 99.9 3.4E-24 1.1E-28 201.9 22.5 226 59-357 60-296 (416)
48 3vl1_A 26S proteasome regulato 99.9 1.8E-23 6E-28 197.5 26.8 169 156-357 130-324 (420)
49 3ei3_B DNA damage-binding prot 99.9 1.4E-23 4.9E-28 196.1 25.6 205 67-358 74-285 (383)
50 3bg1_A Protein SEC13 homolog; 99.9 3E-24 1E-28 196.3 20.4 175 157-354 95-292 (316)
51 3jrp_A Fusion protein of prote 99.9 1.7E-23 5.9E-28 194.0 23.9 211 66-355 55-287 (379)
52 1sq9_A Antiviral protein SKI8; 99.9 3.9E-23 1.3E-27 193.6 26.4 162 162-357 183-397 (397)
53 2pm9_A Protein WEB1, protein t 99.9 7E-24 2.4E-28 199.7 20.8 168 160-357 160-339 (416)
54 2aq5_A Coronin-1A; WD40 repeat 99.9 1.8E-23 6E-28 197.2 23.2 212 66-357 81-301 (402)
55 4aez_A CDC20, WD repeat-contai 99.9 6.3E-23 2.2E-27 193.5 26.9 203 66-357 134-338 (401)
56 1gxr_A ESG1, transducin-like e 99.9 1.5E-22 5.2E-27 184.6 28.1 203 65-357 96-298 (337)
57 2ymu_A WD-40 repeat protein; u 99.9 5.1E-23 1.8E-27 202.4 26.5 162 157-354 377-538 (577)
58 4a11_B DNA excision repair pro 99.9 1.8E-22 6.2E-27 189.0 28.7 210 65-357 98-367 (408)
59 3dw8_B Serine/threonine-protei 99.9 4.9E-23 1.7E-27 195.9 25.2 236 66-355 28-315 (447)
60 3zwl_B Eukaryotic translation 99.9 1.1E-22 3.7E-27 187.7 26.7 206 66-357 32-251 (369)
61 4gga_A P55CDC, cell division c 99.9 2.1E-22 7.3E-27 191.1 28.9 204 67-356 148-396 (420)
62 2vdu_B TRNA (guanine-N(7)-)-me 99.9 8.9E-23 3E-27 195.5 26.3 167 162-357 99-273 (450)
63 4aez_A CDC20, WD repeat-contai 99.9 1E-22 3.5E-27 192.1 26.3 167 160-357 129-295 (401)
64 3k26_A Polycomb protein EED; W 99.9 2.1E-23 7.3E-28 192.4 20.9 209 66-357 69-320 (366)
65 3dm0_A Maltose-binding peripla 99.9 7.1E-23 2.4E-27 206.8 26.3 203 67-357 431-634 (694)
66 3vl1_A 26S proteasome regulato 99.9 3.6E-23 1.2E-27 195.4 22.6 204 64-355 137-365 (420)
67 3dwl_C Actin-related protein 2 99.9 6.4E-24 2.2E-28 197.8 17.2 207 66-354 55-280 (377)
68 1gxr_A ESG1, transducin-like e 99.9 2.7E-22 9.2E-27 182.9 27.0 210 63-357 48-257 (337)
69 4e54_B DNA damage-binding prot 99.9 9.5E-24 3.2E-28 201.5 17.7 171 159-357 113-284 (435)
70 3f3f_A Nucleoporin SEH1; struc 99.9 3.3E-23 1.1E-27 189.0 20.2 174 159-356 5-250 (351)
71 3dw8_B Serine/threonine-protei 99.9 3.3E-23 1.1E-27 197.1 21.0 175 162-357 174-375 (447)
72 1k8k_C P40, ARP2/3 complex 41 99.9 1.3E-22 4.6E-27 187.9 23.9 206 66-355 52-274 (372)
73 2w18_A PALB2, fancn, partner a 99.9 7.4E-23 2.5E-27 186.2 21.3 167 155-353 168-355 (356)
74 4a11_B DNA excision repair pro 99.9 2.3E-22 7.9E-27 188.3 25.2 165 163-357 97-278 (408)
75 3i2n_A WD repeat-containing pr 99.9 3.2E-22 1.1E-26 184.1 25.5 210 65-357 17-245 (357)
76 1r5m_A SIR4-interacting protei 99.9 1.2E-22 4.1E-27 191.1 22.7 162 159-354 241-424 (425)
77 3k26_A Polycomb protein EED; W 99.9 2.8E-23 9.5E-28 191.7 17.7 243 46-355 94-366 (366)
78 3mkq_A Coatomer beta'-subunit; 99.9 1.6E-22 5.3E-27 207.0 24.9 201 68-357 15-219 (814)
79 1r5m_A SIR4-interacting protei 99.9 3.7E-22 1.3E-26 187.7 25.6 188 157-357 141-363 (425)
80 4aow_A Guanine nucleotide-bind 99.9 1E-21 3.5E-26 179.6 27.8 209 67-357 39-248 (340)
81 4ggc_A P55CDC, cell division c 99.9 1.4E-21 4.9E-26 177.0 28.1 204 66-356 67-316 (318)
82 4aow_A Guanine nucleotide-bind 99.9 3E-22 1E-26 183.2 23.4 167 157-357 163-339 (340)
83 3zwl_B Eukaryotic translation 99.9 5.5E-22 1.9E-26 183.0 25.1 236 47-356 96-347 (369)
84 3jro_A Fusion protein of prote 99.9 1.5E-22 5.1E-27 206.4 23.0 207 67-356 10-239 (753)
85 3ei3_B DNA damage-binding prot 99.9 4E-22 1.4E-26 186.3 23.8 172 154-355 62-236 (383)
86 2oaj_A Protein SNI1; WD40 repe 99.9 3E-22 1E-26 207.7 24.4 202 66-357 17-244 (902)
87 1sq9_A Antiviral protein SKI8; 99.9 7.1E-22 2.4E-26 184.9 24.5 224 66-357 62-324 (397)
88 3mmy_A MRNA export factor; mRN 99.9 4E-22 1.4E-26 183.8 22.4 197 66-340 39-335 (368)
89 3v7d_B Cell division control p 99.9 1.2E-21 4E-26 187.8 25.0 172 154-357 151-343 (464)
90 3mkq_A Coatomer beta'-subunit; 99.9 7.9E-22 2.7E-26 201.7 24.7 204 65-357 54-261 (814)
91 3lrv_A PRE-mRNA-splicing facto 99.9 1.2E-21 4E-26 180.9 23.5 168 157-356 117-293 (343)
92 1yfq_A Cell cycle arrest prote 99.9 2.8E-21 9.5E-26 177.1 25.1 205 67-357 12-284 (342)
93 3lrv_A PRE-mRNA-splicing facto 99.9 1E-21 3.6E-26 181.3 22.4 165 165-357 76-246 (343)
94 4h5i_A Guanine nucleotide-exch 99.9 8.2E-22 2.8E-26 184.0 21.9 163 164-357 132-302 (365)
95 3jro_A Fusion protein of prote 99.9 6.2E-22 2.1E-26 201.8 22.4 212 66-356 53-286 (753)
96 3v7d_B Cell division control p 99.9 6.6E-21 2.3E-25 182.6 28.1 219 65-357 161-383 (464)
97 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.5E-21 1.9E-25 183.0 26.8 166 159-353 143-337 (450)
98 3gre_A Serine/threonine-protei 99.9 5.8E-22 2E-26 188.5 19.8 215 67-357 64-294 (437)
99 4gga_A P55CDC, cell division c 99.9 8.5E-21 2.9E-25 180.1 27.5 170 158-357 140-312 (420)
100 1pgu_A Actin interacting prote 99.9 1.4E-21 4.9E-26 193.0 22.8 176 156-357 54-240 (615)
101 3vu4_A KMHSV2; beta-propeller 99.9 9.9E-21 3.4E-25 175.9 26.2 159 167-356 60-272 (355)
102 3i2n_A WD repeat-containing pr 99.9 2.6E-21 8.9E-26 178.0 21.5 172 156-357 9-201 (357)
103 3odt_A Protein DOA1; ubiquitin 99.9 1E-20 3.4E-25 170.8 24.9 164 158-358 135-299 (313)
104 3mmy_A MRNA export factor; mRN 99.9 1.6E-21 5.3E-26 179.8 19.7 124 159-309 33-161 (368)
105 3sfz_A APAF-1, apoptotic pepti 99.9 3E-21 1E-25 206.5 24.6 167 159-357 609-776 (1249)
106 3sfz_A APAF-1, apoptotic pepti 99.9 4.8E-21 1.6E-25 204.9 25.8 202 67-357 616-873 (1249)
107 3odt_A Protein DOA1; ubiquitin 99.9 3.7E-20 1.2E-24 167.1 27.0 197 67-357 19-216 (313)
108 3gre_A Serine/threonine-protei 99.9 1.5E-21 5E-26 185.7 18.6 165 157-352 204-437 (437)
109 1pgu_A Actin interacting prote 99.9 1.5E-20 5E-25 185.7 26.2 207 67-357 64-285 (615)
110 4gq1_A NUP37; propeller, trans 99.9 2.7E-20 9.3E-25 175.3 24.9 219 67-340 137-379 (393)
111 1p22_A F-BOX/WD-repeat protein 99.9 3.1E-20 1.1E-24 176.9 25.2 164 156-357 164-327 (435)
112 4gq1_A NUP37; propeller, trans 99.9 5.5E-21 1.9E-25 180.1 18.6 172 160-358 131-351 (393)
113 1p22_A F-BOX/WD-repeat protein 99.9 7.3E-20 2.5E-24 174.4 23.7 163 156-356 204-366 (435)
114 4ggc_A P55CDC, cell division c 99.9 3.7E-19 1.3E-23 161.0 27.1 171 157-357 59-232 (318)
115 3vu4_A KMHSV2; beta-propeller 99.9 5.9E-20 2E-24 170.6 22.1 171 168-356 140-337 (355)
116 2j04_A TAU60, YPL007P, hypothe 99.9 4E-20 1.4E-24 178.5 21.4 196 66-354 85-296 (588)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.2E-19 4.2E-24 173.1 23.8 161 156-357 150-310 (445)
118 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.3E-18 4.5E-23 166.0 27.6 160 157-357 231-393 (445)
119 2oaj_A Protein SNI1; WD40 repe 99.8 7.1E-20 2.4E-24 189.9 19.1 162 159-357 11-184 (902)
120 2j04_A TAU60, YPL007P, hypothe 99.8 1.4E-19 4.8E-24 174.7 19.4 159 163-358 83-257 (588)
121 1yfq_A Cell cycle arrest prote 99.8 5.8E-20 2E-24 168.2 15.7 160 162-355 8-179 (342)
122 2oit_A Nucleoporin 214KDA; NH2 99.8 1.8E-19 6.3E-24 172.0 16.0 175 161-356 88-279 (434)
123 1l0q_A Surface layer protein; 99.8 8.8E-18 3E-22 156.9 25.5 166 162-357 70-235 (391)
124 1l0q_A Surface layer protein; 99.8 2.4E-17 8E-22 154.0 25.6 164 162-358 112-278 (391)
125 3bws_A Protein LP49; two-domai 99.8 8E-18 2.7E-22 159.4 20.9 164 161-357 165-336 (433)
126 2oit_A Nucleoporin 214KDA; NH2 99.8 8.8E-19 3E-23 167.3 13.2 176 165-354 36-222 (434)
127 3bws_A Protein LP49; two-domai 99.8 5E-17 1.7E-21 153.9 24.1 172 157-358 203-393 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.7 6.3E-16 2.1E-20 146.6 26.6 167 159-358 172-347 (415)
129 2w18_A PALB2, fancn, partner a 99.7 2.6E-17 8.7E-22 149.9 16.0 161 164-358 110-317 (356)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 9E-16 3.1E-20 145.5 26.4 165 160-357 217-389 (415)
131 2ojh_A Uncharacterized protein 99.7 8.4E-16 2.9E-20 136.6 20.4 167 165-358 84-261 (297)
132 2ojh_A Uncharacterized protein 99.7 7.1E-15 2.4E-19 130.6 18.8 165 160-354 36-203 (297)
133 3u4y_A Uncharacterized protein 99.6 8.6E-14 3E-18 126.7 23.6 172 159-358 77-255 (331)
134 3vgz_A Uncharacterized protein 99.6 1.1E-13 3.6E-18 126.9 22.9 162 168-358 143-306 (353)
135 1xfd_A DIP, dipeptidyl aminope 99.6 9.9E-15 3.4E-19 147.4 17.3 162 167-358 62-292 (723)
136 1nir_A Nitrite reductase; hemo 99.6 1.4E-13 4.6E-18 135.0 23.7 159 168-358 181-358 (543)
137 3u4y_A Uncharacterized protein 99.6 4.4E-13 1.5E-17 122.0 24.8 165 162-358 37-210 (331)
138 2ecf_A Dipeptidyl peptidase IV 99.6 7.1E-14 2.4E-18 141.6 20.6 161 166-358 109-324 (741)
139 1ri6_A Putative isomerase YBHE 99.6 1.4E-13 4.7E-18 125.4 20.1 168 163-354 81-261 (343)
140 1ri6_A Putative isomerase YBHE 99.6 1.8E-13 6E-18 124.6 20.3 172 159-354 31-208 (343)
141 3vgz_A Uncharacterized protein 99.6 8.8E-13 3E-17 120.7 24.4 165 163-358 86-265 (353)
142 3hfq_A Uncharacterized protein 99.5 2.3E-12 7.9E-17 118.2 25.4 170 166-358 141-322 (347)
143 1pby_B Quinohemoprotein amine 99.5 1.7E-12 5.9E-17 117.7 22.7 156 167-358 83-313 (337)
144 1z68_A Fibroblast activation p 99.5 6.7E-14 2.3E-18 141.4 14.0 160 167-358 61-294 (719)
145 2ecf_A Dipeptidyl peptidase IV 99.5 2.8E-13 9.6E-18 137.2 18.3 145 165-340 36-228 (741)
146 1nir_A Nitrite reductase; hemo 99.5 2.1E-12 7E-17 126.6 23.0 225 46-355 158-402 (543)
147 1k32_A Tricorn protease; prote 99.5 7.3E-13 2.5E-17 139.6 20.7 163 162-357 292-463 (1045)
148 3hfq_A Uncharacterized protein 99.5 2.7E-12 9.1E-17 117.8 22.0 201 89-355 2-218 (347)
149 1k32_A Tricorn protease; prote 99.5 6E-13 2E-17 140.2 19.5 149 160-340 331-491 (1045)
150 1pby_B Quinohemoprotein amine 99.5 6.2E-12 2.1E-16 114.0 21.0 113 167-309 35-164 (337)
151 1xfd_A DIP, dipeptidyl aminope 99.5 3.3E-13 1.1E-17 136.2 13.3 146 166-340 17-192 (723)
152 2z3z_A Dipeptidyl aminopeptida 99.5 4.4E-12 1.5E-16 127.7 21.5 166 163-357 255-437 (706)
153 3scy_A Hypothetical bacterial 99.4 3.2E-11 1.1E-15 111.2 24.8 204 88-357 12-244 (361)
154 4a5s_A Dipeptidyl peptidase 4 99.4 4.7E-12 1.6E-16 128.6 20.7 160 169-357 65-296 (740)
155 1jmx_B Amine dehydrogenase; ox 99.4 2.6E-11 8.9E-16 110.5 23.0 155 167-358 93-328 (349)
156 3scy_A Hypothetical bacterial 99.4 1.1E-11 3.7E-16 114.4 19.6 172 166-358 155-342 (361)
157 2z3z_A Dipeptidyl aminopeptida 99.4 3.9E-12 1.3E-16 128.1 17.4 165 166-357 181-393 (706)
158 3o4h_A Acylamino-acid-releasin 99.4 2.9E-12 1E-16 126.3 15.4 150 167-353 111-274 (582)
159 1jmx_B Amine dehydrogenase; ox 99.4 3.1E-11 1.1E-15 110.0 20.5 121 167-316 44-182 (349)
160 3o4h_A Acylamino-acid-releasin 99.4 2.1E-11 7.1E-16 120.2 19.8 204 64-358 19-230 (582)
161 1z68_A Fibroblast activation p 99.4 2E-12 6.8E-17 130.6 11.3 174 166-357 110-348 (719)
162 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.3E-10 1.1E-14 104.9 20.8 162 164-354 38-223 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.5E-10 1.2E-14 104.8 21.0 167 166-357 83-294 (365)
164 3pe7_A Oligogalacturonate lyas 99.3 3.1E-10 1E-14 105.4 19.2 165 163-358 78-276 (388)
165 1xip_A Nucleoporin NUP159; bet 99.3 9.1E-11 3.1E-15 109.3 15.2 136 162-338 85-231 (388)
166 4a5s_A Dipeptidyl peptidase 4 99.3 1.3E-10 4.6E-15 117.9 17.8 142 166-339 17-189 (740)
167 3fvz_A Peptidyl-glycine alpha- 99.2 3.9E-09 1.3E-13 96.3 21.7 160 165-357 23-229 (329)
168 3azo_A Aminopeptidase; POP fam 99.2 1.9E-09 6.4E-14 107.6 20.1 160 170-357 81-276 (662)
169 3azo_A Aminopeptidase; POP fam 99.1 7.7E-10 2.6E-14 110.4 16.7 164 163-357 185-371 (662)
170 1q7f_A NHL, brain tumor CG1071 99.1 7.2E-09 2.5E-13 92.1 21.0 156 164-356 119-281 (286)
171 3pe7_A Oligogalacturonate lyas 99.1 1.4E-09 4.7E-14 100.9 16.3 169 159-357 24-227 (388)
172 1xip_A Nucleoporin NUP159; bet 99.1 5.3E-10 1.8E-14 104.2 12.8 155 167-357 39-193 (388)
173 2xdw_A Prolyl endopeptidase; a 99.1 2.1E-08 7.2E-13 101.2 24.0 178 160-357 227-416 (710)
174 2dg1_A DRP35, lactonase; beta 99.1 3.4E-08 1.2E-12 89.6 22.9 165 159-354 38-212 (333)
175 2xdw_A Prolyl endopeptidase; a 99.1 1.8E-08 6E-13 101.8 22.3 237 35-357 99-370 (710)
176 3e5z_A Putative gluconolactona 99.0 1E-08 3.5E-13 91.7 18.1 159 163-354 25-201 (296)
177 3c5m_A Oligogalacturonate lyas 99.0 2.1E-09 7.1E-14 99.7 12.6 159 169-358 84-276 (396)
178 3fvz_A Peptidyl-glycine alpha- 99.0 1.7E-08 6E-13 92.0 17.9 166 163-357 88-279 (329)
179 1q7f_A NHL, brain tumor CG1071 99.0 6.4E-08 2.2E-12 85.9 19.8 155 164-354 75-237 (286)
180 2dg1_A DRP35, lactonase; beta 99.0 2.3E-07 7.8E-12 84.1 23.9 159 163-354 84-262 (333)
181 2oiz_A Aromatic amine dehydrog 99.0 7.5E-08 2.6E-12 89.1 20.5 67 282-356 259-335 (361)
182 3no2_A Uncharacterized protein 98.9 9.6E-08 3.3E-12 85.0 20.2 168 154-358 24-198 (276)
183 2gop_A Trilobed protease; beta 98.9 1.3E-08 4.3E-13 92.9 14.9 144 168-356 106-292 (347)
184 2bkl_A Prolyl endopeptidase; m 98.9 2E-08 6.7E-13 101.2 17.0 167 163-357 118-306 (695)
185 2bkl_A Prolyl endopeptidase; m 98.9 5.7E-08 1.9E-12 97.8 19.3 175 156-358 217-400 (695)
186 1qks_A Cytochrome CD1 nitrite 98.9 6.2E-07 2.1E-11 87.9 25.5 171 163-358 194-376 (567)
187 1rwi_B Serine/threonine-protei 98.9 1.5E-07 5.1E-12 82.5 18.3 159 166-357 108-266 (270)
188 3e5z_A Putative gluconolactona 98.9 1.5E-07 5E-12 84.1 18.1 159 166-359 115-290 (296)
189 1rwi_B Serine/threonine-protei 98.8 3.9E-07 1.3E-11 79.8 19.7 158 164-356 65-223 (270)
190 3c5m_A Oligogalacturonate lyas 98.8 5.7E-09 2E-13 96.7 6.9 159 168-357 38-227 (396)
191 1yr2_A Prolyl oligopeptidase; 98.7 7.8E-07 2.7E-11 90.2 21.2 175 157-357 259-443 (741)
192 2gop_A Trilobed protease; beta 98.7 1.1E-07 3.9E-12 86.5 13.6 149 166-352 59-250 (347)
193 2z2n_A Virginiamycin B lyase; 98.7 2.2E-06 7.6E-11 75.8 21.3 165 159-357 8-172 (299)
194 1yr2_A Prolyl oligopeptidase; 98.7 2.5E-07 8.6E-12 93.8 15.7 167 164-356 161-351 (741)
195 3no2_A Uncharacterized protein 98.7 2.8E-07 9.6E-12 82.0 14.1 143 179-358 6-157 (276)
196 2z2n_A Virginiamycin B lyase; 98.7 4.1E-06 1.4E-10 74.0 21.6 159 164-357 55-214 (299)
197 1qks_A Cytochrome CD1 nitrite 98.7 1E-05 3.6E-10 79.2 25.7 226 45-355 175-421 (567)
198 3hrp_A Uncharacterized protein 98.7 8.2E-06 2.8E-10 76.7 23.8 158 171-358 176-357 (409)
199 3dsm_A Uncharacterized protein 98.6 3E-06 1E-10 77.1 20.0 159 163-358 81-256 (328)
200 3iuj_A Prolyl endopeptidase; h 98.6 3E-06 1E-10 85.2 20.8 228 44-356 110-360 (693)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 2.5E-06 8.7E-11 76.2 18.3 161 166-355 117-299 (314)
202 2oiz_A Aromatic amine dehydrog 98.6 2.3E-06 8E-11 79.0 17.4 90 235-333 259-360 (361)
203 3iuj_A Prolyl endopeptidase; h 98.6 9.2E-07 3.2E-11 89.0 15.4 168 164-357 127-316 (693)
204 3dr2_A Exported gluconolactona 98.5 8.8E-06 3E-10 73.0 18.5 164 162-355 41-224 (305)
205 2qc5_A Streptogramin B lactona 98.5 2.2E-05 7.7E-10 69.2 21.0 157 163-353 17-174 (300)
206 3g4e_A Regucalcin; six bladed 98.5 6.1E-06 2.1E-10 73.8 17.4 151 166-340 98-261 (297)
207 3dsm_A Uncharacterized protein 98.5 3.1E-05 1.1E-09 70.3 22.0 157 167-357 132-303 (328)
208 2qc5_A Streptogramin B lactona 98.5 3.3E-05 1.1E-09 68.1 21.4 156 164-353 60-216 (300)
209 3g4e_A Regucalcin; six bladed 98.5 3.2E-05 1.1E-09 69.1 21.0 158 164-353 11-178 (297)
210 2mad_H Methylamine dehydrogena 98.4 0.00011 3.6E-09 68.2 24.9 171 162-358 164-353 (373)
211 2ghs_A AGR_C_1268P; regucalcin 98.4 2E-05 6.9E-10 71.4 18.7 152 167-354 50-209 (326)
212 2ghs_A AGR_C_1268P; regucalcin 98.4 0.00021 7.2E-09 64.6 24.9 147 166-340 134-291 (326)
213 2hz6_A Endoplasmic reticulum t 98.3 1.9E-07 6.7E-12 86.6 2.4 152 166-358 38-195 (369)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 3.4E-05 1.2E-09 68.7 16.9 158 163-354 15-206 (314)
215 3hrp_A Uncharacterized protein 98.3 3.4E-05 1.2E-09 72.4 17.6 157 166-354 131-297 (409)
216 2hz6_A Endoplasmic reticulum t 98.2 3.4E-07 1.1E-11 85.0 2.1 142 179-359 10-153 (369)
217 1npe_A Nidogen, entactin; glyc 98.1 0.00076 2.6E-08 58.8 21.6 160 166-355 36-198 (267)
218 2qe8_A Uncharacterized protein 98.1 7.3E-05 2.5E-09 68.2 14.5 164 163-357 64-280 (343)
219 2ece_A 462AA long hypothetical 98.1 0.00023 8E-09 66.8 17.8 156 168-354 140-351 (462)
220 2ece_A 462AA long hypothetical 98.0 0.00095 3.2E-08 62.7 21.7 141 175-340 93-272 (462)
221 2qe8_A Uncharacterized protein 98.0 0.00011 3.7E-09 67.1 14.5 172 165-340 119-310 (343)
222 3mbr_X Glutamine cyclotransfer 98.0 0.0026 9E-08 54.7 22.0 144 177-350 74-233 (243)
223 3dr2_A Exported gluconolactona 98.0 0.00013 4.3E-09 65.3 14.2 141 167-340 132-296 (305)
224 3nol_A Glutamine cyclotransfer 97.9 0.0018 6.3E-08 56.3 20.3 157 166-351 85-255 (262)
225 2iwa_A Glutamine cyclotransfer 97.9 0.001 3.5E-08 58.3 18.6 164 158-358 11-184 (266)
226 1mda_H Methylamine dehydrogena 97.9 0.00028 9.5E-09 65.2 15.4 73 282-358 269-349 (368)
227 1ijq_A LDL receptor, low-densi 97.9 0.0095 3.2E-07 53.4 24.5 166 163-354 27-194 (316)
228 2iwa_A Glutamine cyclotransfer 97.8 0.0044 1.5E-07 54.3 21.2 141 170-341 70-226 (266)
229 3v64_C Agrin; beta propeller, 97.8 0.0088 3E-07 54.5 24.2 161 164-354 71-233 (349)
230 2mad_H Methylamine dehydrogena 97.8 0.00072 2.5E-08 62.5 16.9 99 189-315 48-162 (373)
231 3nok_A Glutaminyl cyclase; bet 97.8 0.0011 3.8E-08 57.8 16.7 135 176-340 104-254 (268)
232 1npe_A Nidogen, entactin; glyc 97.8 0.012 4.2E-07 50.9 23.7 159 166-357 79-240 (267)
233 3v65_B Low-density lipoprotein 97.8 0.0049 1.7E-07 57.1 22.1 162 164-354 114-276 (386)
234 3sjl_D Methylamine dehydrogena 97.8 0.00028 9.6E-09 65.3 13.0 139 173-340 40-207 (386)
235 3nol_A Glutamine cyclotransfer 97.8 0.00081 2.8E-08 58.6 15.1 161 159-358 34-204 (262)
236 3c75_H MADH, methylamine dehyd 97.8 0.00085 2.9E-08 63.1 16.1 161 171-358 222-405 (426)
237 3nok_A Glutaminyl cyclase; bet 97.7 0.001 3.4E-08 58.0 15.2 162 158-358 45-213 (268)
238 3sjl_D Methylamine dehydrogena 97.6 0.0036 1.2E-07 57.9 18.2 153 170-357 82-258 (386)
239 3p5b_L Low density lipoprotein 97.6 0.035 1.2E-06 51.6 25.3 168 162-354 108-276 (400)
240 3mbr_X Glutamine cyclotransfer 97.6 0.0037 1.3E-07 53.8 17.1 163 157-358 10-182 (243)
241 1fwx_A Nitrous oxide reductase 97.5 0.00087 3E-08 65.1 12.6 122 231-357 278-433 (595)
242 3c75_H MADH, methylamine dehyd 97.5 0.00097 3.3E-08 62.7 11.9 137 176-339 83-246 (426)
243 3m0c_C LDL receptor, low-densi 97.4 0.042 1.4E-06 55.8 24.0 168 162-354 420-588 (791)
244 3sov_A LRP-6, low-density lipo 97.4 0.043 1.5E-06 49.3 21.7 161 166-354 35-196 (318)
245 2xe4_A Oligopeptidase B; hydro 97.4 0.015 5.1E-07 58.8 20.3 225 47-353 157-398 (751)
246 2fp8_A Strictosidine synthase; 97.4 0.0097 3.3E-07 53.3 17.1 177 166-355 19-216 (322)
247 2xe4_A Oligopeptidase B; hydro 97.3 0.0087 3E-07 60.5 18.2 162 167-355 175-354 (751)
248 3v65_B Low-density lipoprotein 97.2 0.13 4.3E-06 47.5 22.9 160 166-356 159-319 (386)
249 3v64_C Agrin; beta propeller, 97.2 0.12 4.1E-06 46.9 22.2 159 166-356 116-276 (349)
250 1kb0_A Quinohemoprotein alcoho 97.2 0.0055 1.9E-07 61.2 14.3 54 299-358 457-510 (677)
251 1yiq_A Quinohemoprotein alcoho 97.1 0.012 3.9E-07 59.0 15.8 55 298-358 454-508 (689)
252 3amr_A 3-phytase; beta-propell 97.1 0.15 5.3E-06 46.1 21.5 164 166-354 68-262 (355)
253 3tc9_A Hypothetical hydrolase; 97.0 0.02 6.9E-07 53.8 16.0 154 168-353 139-299 (430)
254 3hxj_A Pyrrolo-quinoline quino 96.9 0.036 1.2E-06 49.1 16.2 148 164-353 135-282 (330)
255 3qqz_A Putative uncharacterize 96.9 0.17 5.9E-06 43.7 21.1 165 163-354 24-203 (255)
256 1fwx_A Nitrous oxide reductase 96.9 0.03 1E-06 54.4 15.9 74 278-355 278-361 (595)
257 1ijq_A LDL receptor, low-densi 96.9 0.22 7.6E-06 44.3 20.9 159 166-357 77-240 (316)
258 3hxj_A Pyrrolo-quinoline quino 96.8 0.036 1.2E-06 49.1 15.4 149 164-354 175-323 (330)
259 3kya_A Putative phosphatase; s 96.8 0.036 1.2E-06 52.9 15.5 158 168-352 141-338 (496)
260 1kb0_A Quinohemoprotein alcoho 96.8 0.0067 2.3E-07 60.6 10.9 80 252-338 457-537 (677)
261 3sov_A LRP-6, low-density lipo 96.6 0.35 1.2E-05 43.2 21.4 159 166-357 79-240 (318)
262 2p4o_A Hypothetical protein; p 96.6 0.35 1.2E-05 42.6 20.1 164 158-355 24-198 (306)
263 1n7d_A LDL receptor, low-densi 96.6 0.01 3.6E-07 59.4 10.7 164 166-354 406-570 (699)
264 2p9w_A MAL S 1 allergenic prot 96.6 0.15 5.1E-06 45.8 17.0 164 163-354 10-214 (334)
265 3sre_A PON1, serum paraoxonase 96.5 0.2 6.7E-06 45.7 18.0 169 159-354 42-251 (355)
266 3m0c_C LDL receptor, low-densi 96.4 0.29 9.9E-06 49.6 20.4 160 165-356 470-633 (791)
267 3p5b_L Low density lipoprotein 96.4 0.45 1.6E-05 43.9 20.1 160 165-356 158-321 (400)
268 2fp8_A Strictosidine synthase; 96.3 0.11 3.6E-06 46.3 14.9 110 232-354 187-312 (322)
269 4a0p_A LRP6, LRP-6, low-densit 96.2 1.1 3.7E-05 44.2 25.7 159 165-355 36-197 (628)
270 3pbp_A Nucleoporin NUP82; beta 96.2 0.46 1.6E-05 44.1 18.4 104 231-337 67-196 (452)
271 3q7m_A Lipoprotein YFGL, BAMB; 96.2 0.11 3.8E-06 47.1 14.6 66 244-317 105-170 (376)
272 4hw6_A Hypothetical protein, I 96.1 0.31 1.1E-05 45.7 17.5 158 166-353 228-431 (433)
273 3q7m_A Lipoprotein YFGL, BAMB; 96.1 0.74 2.5E-05 41.5 20.0 100 243-358 240-340 (376)
274 2p4o_A Hypothetical protein; p 96.1 0.49 1.7E-05 41.6 17.9 162 164-354 70-241 (306)
275 4hw6_A Hypothetical protein, I 96.1 0.24 8.3E-06 46.4 16.5 153 168-353 141-302 (433)
276 1mda_H Methylamine dehydrogena 96.0 0.013 4.5E-07 53.8 7.3 102 179-308 33-158 (368)
277 1yiq_A Quinohemoprotein alcoho 96.0 0.079 2.7E-06 52.9 13.4 72 281-358 239-341 (689)
278 3qqz_A Putative uncharacterize 95.9 0.73 2.5E-05 39.7 22.5 167 166-353 70-251 (255)
279 3s94_A LRP-6, low-density lipo 95.8 1.1 3.9E-05 43.9 20.8 164 163-354 37-201 (619)
280 4a2l_A BT_4663, two-component 95.8 1.2 4E-05 45.0 21.2 162 166-356 310-481 (795)
281 1n7d_A LDL receptor, low-densi 95.5 0.029 1E-06 56.2 8.0 157 168-356 455-615 (699)
282 1kv9_A Type II quinohemoprotei 95.3 0.15 5.3E-06 50.6 12.6 55 298-358 437-491 (668)
283 3kya_A Putative phosphatase; s 95.3 0.77 2.6E-05 43.7 16.6 171 168-355 249-475 (496)
284 2xbg_A YCF48-like protein; pho 95.0 1.8 6.1E-05 38.5 18.9 157 162-352 159-319 (327)
285 4a2l_A BT_4663, two-component 95.0 2.5 8.5E-05 42.6 20.7 142 166-338 357-515 (795)
286 4a0p_A LRP6, LRP-6, low-densit 94.8 3.5 0.00012 40.5 22.3 115 231-353 390-506 (628)
287 3s94_A LRP-6, low-density lipo 94.6 3.7 0.00012 40.3 22.4 156 168-353 351-508 (619)
288 3tc9_A Hypothetical hydrolase; 94.6 2.3 8E-05 39.5 18.0 122 162-308 175-301 (430)
289 2ad6_A Methanol dehydrogenase 94.4 0.36 1.2E-05 46.9 12.1 82 250-338 442-524 (571)
290 1flg_A Protein (quinoprotein e 94.1 0.38 1.3E-05 46.9 11.6 80 251-338 465-546 (582)
291 2xbg_A YCF48-like protein; pho 94.0 3.1 0.00011 36.9 18.0 104 227-339 160-268 (327)
292 1k3i_A Galactose oxidase precu 93.9 0.84 2.9E-05 45.1 13.8 115 170-309 190-324 (656)
293 3v9f_A Two-component system se 93.8 3.7 0.00013 41.2 18.7 141 166-337 450-599 (781)
294 3v9f_A Two-component system se 93.7 5.4 0.00019 40.0 19.8 155 166-357 313-480 (781)
295 3a9g_A Putative uncharacterize 93.7 2.7 9.2E-05 37.9 15.9 153 165-340 28-217 (354)
296 2ad6_A Methanol dehydrogenase 93.6 1.4 4.7E-05 42.8 14.5 55 298-358 443-497 (571)
297 1kv9_A Type II quinohemoprotei 93.2 0.94 3.2E-05 44.9 12.9 72 281-358 234-336 (668)
298 3sre_A PON1, serum paraoxonase 92.8 3.2 0.00011 37.6 14.8 102 230-335 221-328 (355)
299 1w6s_A Methanol dehydrogenase 92.7 3.1 0.0001 40.6 15.5 55 298-358 452-506 (599)
300 1flg_A Protein (quinoprotein e 92.4 3.7 0.00013 39.8 15.6 55 298-358 465-519 (582)
301 1cru_A Protein (soluble quinop 92.3 5.8 0.0002 37.2 16.4 112 165-297 26-163 (454)
302 1bpo_A Protein (clathrin); cla 92.3 7.3 0.00025 36.4 18.4 161 165-357 105-291 (494)
303 3ei3_A DNA damage-binding prot 92.2 4.1 0.00014 43.1 16.6 180 50-308 810-999 (1158)
304 2ism_A Putative oxidoreductase 91.9 4.4 0.00015 36.4 14.6 151 167-340 32-222 (352)
305 3pbp_A Nucleoporin NUP82; beta 91.5 4.3 0.00015 37.7 13.9 127 166-303 66-207 (452)
306 2xzh_A Clathrin heavy chain 1; 91.3 7.8 0.00027 34.7 18.2 162 165-358 106-293 (365)
307 1w6s_A Methanol dehydrogenase 91.0 2.1 7.1E-05 41.8 12.1 81 250-338 451-533 (599)
308 1k3i_A Galactose oxidase precu 90.7 1 3.5E-05 44.4 9.7 117 234-356 190-324 (656)
309 3das_A Putative oxidoreductase 90.3 9.9 0.00034 34.2 16.1 154 164-340 30-221 (347)
310 2g8s_A Glucose/sorbosone dehyd 88.9 12 0.0004 33.6 14.7 154 166-340 18-217 (353)
311 2ism_A Putative oxidoreductase 88.4 4.3 0.00015 36.5 11.4 107 229-338 30-152 (352)
312 2p9w_A MAL S 1 allergenic prot 88.1 6.7 0.00023 35.1 12.0 75 231-309 138-216 (334)
313 3a9g_A Putative uncharacterize 86.0 6 0.00021 35.6 10.9 107 229-338 28-152 (354)
314 1tl2_A L10, protein (tachylect 85.5 15 0.00052 30.8 14.6 153 160-338 33-199 (236)
315 3amr_A 3-phytase; beta-propell 84.8 16 0.00056 32.8 12.9 133 166-316 128-271 (355)
316 1xi4_A Clathrin heavy chain; a 84.6 27 0.00092 37.8 15.9 160 166-357 106-291 (1630)
317 2xzh_A Clathrin heavy chain 1; 84.1 23 0.00079 31.7 22.3 208 44-331 83-312 (365)
318 1bpo_A Protein (clathrin); cla 82.4 32 0.0011 32.1 25.4 213 44-336 82-316 (494)
319 4gq2_M Nucleoporin NUP120; bet 81.5 29 0.00099 35.8 14.9 37 278-316 237-273 (950)
320 2wg3_C Hedgehog-interacting pr 81.0 35 0.0012 31.9 14.2 109 231-340 15-158 (463)
321 3das_A Putative oxidoreductase 80.5 32 0.0011 30.8 13.7 114 224-338 26-157 (347)
322 1tl2_A L10, protein (tachylect 80.5 6.3 0.00021 33.2 7.7 101 231-338 42-152 (236)
323 1xi4_A Clathrin heavy chain; a 79.3 76 0.0026 34.4 18.3 191 44-314 82-294 (1630)
324 1cru_A Protein (soluble quinop 78.8 42 0.0014 31.2 14.2 115 223-339 20-162 (454)
325 3s25_A Hypothetical 7-bladed b 70.7 53 0.0018 28.6 12.6 91 235-340 109-203 (302)
326 3ei3_A DNA damage-binding prot 68.9 81 0.0028 33.3 14.5 103 179-304 937-1058(1158)
327 2vpj_A Kelch-like protein 12; 64.9 64 0.0022 27.3 15.0 104 244-356 115-232 (301)
328 2vpj_A Kelch-like protein 12; 64.3 66 0.0022 27.3 16.5 104 244-356 162-279 (301)
329 1zgk_A Kelch-like ECH-associat 60.8 79 0.0027 27.0 14.0 104 244-356 171-288 (308)
330 2zwa_A Leucine carboxyl methyl 53.1 1.7E+02 0.006 28.6 16.7 67 240-309 500-578 (695)
331 3s25_A Hypothetical 7-bladed b 53.0 1.1E+02 0.0039 26.4 11.4 91 235-339 150-241 (302)
332 2be1_A Serine/threonine-protei 49.8 62 0.0021 28.8 8.3 26 291-317 113-138 (339)
333 2xn4_A Kelch-like protein 2; s 49.4 1.2E+02 0.0041 25.6 11.4 61 244-309 207-277 (302)
334 2xn4_A Kelch-like protein 2; s 43.4 1.5E+02 0.0051 25.0 16.4 104 244-356 158-277 (302)
335 4gq2_M Nucleoporin NUP120; bet 42.7 3E+02 0.01 28.2 13.9 31 231-262 237-267 (950)
336 3sbq_A Nitrous-oxide reductase 41.7 96 0.0033 30.0 8.4 92 160-261 317-408 (638)
337 3ii7_A Kelch-like protein 7; p 40.8 1.6E+02 0.0056 24.7 13.8 61 244-309 203-273 (306)
338 3ii7_A Kelch-like protein 7; p 39.3 1.7E+02 0.0059 24.6 17.0 96 252-356 169-273 (306)
339 4fhn_B Nucleoporin NUP120; pro 36.1 28 0.00095 36.7 4.3 37 278-316 239-275 (1139)
340 2zwa_A Leucine carboxyl methyl 34.6 3.4E+02 0.011 26.5 13.8 111 240-357 451-579 (695)
341 1sqj_A OXG-RCBH, oligoxylogluc 34.1 2.6E+02 0.0087 27.9 10.9 153 166-339 15-187 (789)
342 4a9v_A PHOX; hydrolase, beta-p 33.7 1.7E+02 0.0058 28.2 8.9 63 277-341 476-551 (592)
343 4asc_A Kelch repeat and BTB do 32.3 2.3E+02 0.0079 23.9 16.8 61 244-309 151-222 (315)
344 3f7f_A Nucleoporin NUP120; nuc 31.8 69 0.0024 31.8 6.0 35 278-316 223-257 (729)
345 3sbq_A Nitrous-oxide reductase 26.6 1.3E+02 0.0044 29.1 6.6 77 231-308 324-408 (638)
346 2g8s_A Glucose/sorbosone dehyd 25.7 3.4E+02 0.011 23.7 18.9 61 277-339 271-341 (353)
347 2be1_A Serine/threonine-protei 22.8 1.6E+02 0.0054 26.1 6.2 62 244-309 12-77 (339)
348 2wg3_C Hedgehog-interacting pr 21.6 4.8E+02 0.016 24.0 12.9 29 167-196 15-44 (463)
349 3zwu_A Alkaline phosphatase PH 20.9 3.8E+02 0.013 25.7 8.9 61 278-340 477-550 (592)
350 2cn3_A Xyloglucanase, beta-1,4 20.4 6.1E+02 0.021 24.8 13.1 112 166-296 23-151 (737)
351 3zwu_A Alkaline phosphatase PH 20.2 2.6E+02 0.0088 27.0 7.5 58 233-295 479-549 (592)
No 1
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1e-42 Score=332.80 Aligned_cols=282 Identities=26% Similarity=0.421 Sum_probs=218.3
Q ss_pred CCCCCCeeeeCCcccCCCCceeeeChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEE
Q 018235 29 IPSLPTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGV 108 (359)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i 108 (359)
..+++|++|+++++ +||+|++++.|+||||+|||+|+..+..+..|| .+++++||++.+ ..|+|+|
T Consensus 20 ~~~~~~~~wk~n~~------------~~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~-~~~~~~GT~t~~-~~n~i~i 85 (430)
T 2xyi_A 20 VINEEYKIWKKNTP------------FLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYS-VHRLILGTHTSD-EQNHLLI 85 (430)
T ss_dssp HHHHHHHHHHHHHH------------HHEEEEEEEECSSCCSCEEECSCCEECTTCSCE-EEEEEEECCCSS-SCEEEEE
T ss_pred hhhHHHhhHhhCCh------------HHHHHHhhcCCCCCceEEEECcccccccCCCcc-eEEEEEEEcCCC-CCCEEEE
Confidence 34568999999999 999999999999999999999999888888898 699999999998 8999999
Q ss_pred EEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCC--CCCCeE-EEEEecCCCceeeEEEeCCCCcEEEEEe
Q 018235 109 FKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDEEGG--SGTPIL-QLRKVAHQGCVNRIRAMTQNPHICASWA 185 (359)
Q Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~~~~--~~~~~~-~~~~~~H~~~V~~i~~~p~~~~~lat~s 185 (359)
+++. |+...... ++.++ |+++++.++ ...+.+ ....++|.+.|++++|+|+++.+||+++
T Consensus 86 ~~~~-lp~~~~~~------------~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~ 148 (430)
T 2xyi_A 86 ASVQ-LPSEDAQF------------DGSHY----DNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKT 148 (430)
T ss_dssp EEEE-EC------------------------------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEEC
T ss_pred EEEE-CCCCcccc------------ccccc----cccccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEEC
Confidence 9996 54322110 11111 111111110 124444 4778899999999999998558999999
Q ss_pred CCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCc-
Q 018235 186 DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDAT- 264 (359)
Q Consensus 186 ~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~- 264 (359)
.+|.|+||++........... ...++..+.+|...|++|+|+|.+.++|++|+.||.|++|+++....
T Consensus 149 ~dg~V~vwd~~~~~~~~~~~~-----------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 217 (430)
T 2xyi_A 149 PSSDVLVFDYTKHPSKPEPSG-----------ECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE 217 (430)
T ss_dssp SSSCEEEEEGGGSCSSCCTTC-----------CCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG
T ss_pred CCCcEEEEECCCcccccCccc-----------cCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC
Confidence 999999999986322211000 25678899999999999999999988999999999999999987322
Q ss_pred --ceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC--CceEEeecCCCCEEEEEEcCCCCe-EEEEe
Q 018235 265 --WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK--SALTSFKAHNADVNVISWNRCWLA-VCWHL 339 (359)
Q Consensus 265 --~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~--~~~~~~~~h~~~V~~i~~s~~~~~-l~~~~ 339 (359)
.......+.+|...|.+++|+|.+..+|++|+.||.|+|||+++.. .++..+..|...|++|+|+|++.. ++++.
T Consensus 218 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~ 297 (430)
T 2xyi_A 218 HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGS 297 (430)
T ss_dssp GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEe
Confidence 1112355778999999999999766699999999999999999862 467778899999999999999985 55555
Q ss_pred eecccceEEEEEeCcCC
Q 018235 340 EVMMEHFLFMILDCSRG 356 (359)
Q Consensus 340 ~~~~~d~~i~iwd~~~g 356 (359)
. ++.|++|+.+..
T Consensus 298 ~----dg~v~vwd~~~~ 310 (430)
T 2xyi_A 298 A----DKTVALWDLRNL 310 (430)
T ss_dssp T----TSEEEEEETTCT
T ss_pred C----CCeEEEEeCCCC
Confidence 4 899999999873
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=7.9e-29 Score=229.91 Aligned_cols=211 Identities=16% Similarity=0.233 Sum_probs=170.0
Q ss_pred ccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (359)
Q Consensus 65 ~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~ 144 (359)
.+-+..++.|.|+. +|++|+ .++.|+||++..-
T Consensus 81 ~~~~v~~~~~s~d~------------~l~~~s-----~dg~v~lWd~~~~------------------------------ 113 (344)
T 4gqb_B 81 TEAGVADLTWVGER------------GILVAS-----DSGAVELWELDEN------------------------------ 113 (344)
T ss_dssp ESSCEEEEEEETTT------------EEEEEE-----TTSEEEEEEECTT------------------------------
T ss_pred cCCCEEEEEEeCCC------------eEEEEE-----CCCEEEEEeccCC------------------------------
Confidence 34567788888873 567776 4679999998310
Q ss_pred CcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE
Q 018235 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
.....+.....+|.+.|++++|+|++ .+||+|+.||+|+|||+.. .+++.+
T Consensus 114 -------~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~---------------------~~~~~~ 164 (344)
T 4gqb_B 114 -------ETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQ---------------------QVVLSS 164 (344)
T ss_dssp -------SSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEE
T ss_pred -------CceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEE
Confidence 01223445667999999999999999 8999999999999999987 677889
Q ss_pred ecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEE
Q 018235 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304 (359)
Q Consensus 225 ~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iw 304 (359)
+.+|...|++++|+|++..+|+||+.|++|++||++++ +.... .....|...+.+++|+|.+..+|++|+.||+|+||
T Consensus 165 ~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-~~~~~-~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~w 242 (344)
T 4gqb_B 165 YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP-KPASQ-IGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLV 242 (344)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS-SCEEE-CC----CCCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EcCcCCceEEEEecCCCCCceeeecccccccccccccc-ceeee-eecceeeccceeeeecCCCCcceEEeccCCcEEEE
Confidence 99999999999999999778999999999999999874 33311 12345667899999999877799999999999999
Q ss_pred ECCCCCCceEEeecCCCCEEEEEEcCCCC-eEEEEeeecccceEEEEEeCcCCcc
Q 018235 305 DTRVGKSALTSFKAHNADVNVISWNRCWL-AVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~s~~~~-~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
|++++ +++..+.+|...|++++|+|++. +|+.+.. |+.|++||.+++++
T Consensus 243 d~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~----D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 243 DTKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSE----DCSLAVLDSSLSEL 292 (344)
T ss_dssp ESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEET----TSCEEEECTTCCEE
T ss_pred ECCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeC----CCeEEEEECCCCcE
Confidence 99998 78889999999999999999985 5666655 89999999988753
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.6e-28 Score=227.87 Aligned_cols=205 Identities=19% Similarity=0.230 Sum_probs=167.2
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|+ .++.|.||++.
T Consensus 127 ~~~V~~v~~spdg-----------~~l~sgs-----~d~~i~iwd~~--------------------------------- 157 (344)
T 4gqb_B 127 DDIVSTVSVLSSG-----------TQAVSGS-----KDICIKVWDLA--------------------------------- 157 (344)
T ss_dssp SSCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT---------------------------------
T ss_pred CCCEEEEEECCCC-----------CEEEEEe-----CCCeEEEEECC---------------------------------
Confidence 3466788888875 4777777 46789999873
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.......+.+|.+.|+++.|+|++..++++++.||+|+|||++. .++...+
T Consensus 158 --------~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---------------------~~~~~~~ 208 (344)
T 4gqb_B 158 --------QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC---------------------PKPASQI 208 (344)
T ss_dssp --------TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS---------------------SSCEEEC
T ss_pred --------CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc---------------------cceeeee
Confidence 44566778899999999999999878999999999999999987 4555555
Q ss_pred c--CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 226 G--GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 226 ~--~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
. .|...+.+++|+|.+..+|++|+.||+|+|||+++ ++.+ ..+.+|...|++|+|+|++..+||+|+.|++|+|
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~~~---~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~v 284 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS-TSCV---LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV 284 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CC---EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-CcEE---EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEE
Confidence 3 45557899999998766899999999999999987 4444 6788999999999999998769999999999999
Q ss_pred EECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 304 WDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
||++++ .+..+.+|...|++++|+|++..++.+.. .|+.|++|+..+.+
T Consensus 285 wd~~~~--~~~~~~~H~~~V~~v~~sp~~~~llas~s---~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 285 LDSSLS--ELFRSQAHRDFVRDATWSPLNHSLLTTVG---WDHQVVHHVVPTEP 333 (344)
T ss_dssp ECTTCC--EEEEECCCSSCEEEEEECSSSTTEEEEEE---TTSCEEEEECCC--
T ss_pred EECCCC--cEEEEcCCCCCEEEEEEeCCCCeEEEEEc---CCCeEEEEECCCCC
Confidence 999985 45667899999999999999986654433 28999999987654
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=6.7e-28 Score=221.35 Aligned_cols=165 Identities=19% Similarity=0.285 Sum_probs=149.6
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (359)
....+..|...|.+++|+|++ .+||+++.||.|++||+.. .+++..+.+|...|.+++
T Consensus 156 ~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~---------------------~~~~~~~~~h~~~v~~l~ 213 (321)
T 3ow8_A 156 KEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIAT---------------------GKLLHTLEGHAMPIRSLT 213 (321)
T ss_dssp EEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCCCEEE
T ss_pred eeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCC---------------------CcEEEEEcccCCceeEEE
Confidence 345666889999999999999 8999999999999999987 567788999999999999
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
|+|++. +|++|+.||+|++||++. .... ..+.+|...|.+++|+|++. +|++++.|++|+|||++++ .++..+
T Consensus 214 ~spd~~-~l~s~s~dg~i~iwd~~~-~~~~---~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~-~~~~~~ 286 (321)
T 3ow8_A 214 FSPDSQ-LLVTASDDGYIKIYDVQH-ANLA---GTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTR-TCVHTF 286 (321)
T ss_dssp ECTTSC-EEEEECTTSCEEEEETTT-CCEE---EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT-EEEEEE
T ss_pred EcCCCC-EEEEEcCCCeEEEEECCC-ccee---EEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-EEEEEE
Confidence 999998 999999999999999987 4443 56889999999999999999 9999999999999999987 788888
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 317 KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 317 ~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
..|...|++++|+|++..|+.+.. |+.|++||..
T Consensus 287 ~~h~~~v~~v~~s~~g~~l~s~~~----d~~i~vwd~p 320 (321)
T 3ow8_A 287 FDHQDQVWGVKYNGNGSKIVSVGD----DQEIHIYDCP 320 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEET----TCCEEEEECC
T ss_pred cCCCCcEEEEEECCCCCEEEEEeC----CCeEEEEeCC
Confidence 999999999999999999988876 8999999963
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=1.5e-27 Score=217.14 Aligned_cols=206 Identities=18% Similarity=0.265 Sum_probs=172.0
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-|..++.|.|+. .+|++|. .++.|.||++.
T Consensus 55 ~~~v~~~~~~~~~-----------~~l~s~s-----~d~~i~vwd~~--------------------------------- 85 (304)
T 2ynn_A 55 ETPVRAGKFIARK-----------NWIIVGS-----DDFRIRVFNYN--------------------------------- 85 (304)
T ss_dssp SSCEEEEEEEGGG-----------TEEEEEE-----TTSEEEEEETT---------------------------------
T ss_pred CCcEEEEEEeCCC-----------CEEEEEC-----CCCEEEEEECC---------------------------------
Confidence 4577888898885 4777887 47799999872
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.......+.+|.+.|++++|+|++ .++++++.||+|++||+.. .......+
T Consensus 86 --------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~--------------------~~~~~~~~ 136 (304)
T 2ynn_A 86 --------TGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWEN--------------------NWALEQTF 136 (304)
T ss_dssp --------TCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGG--------------------TTEEEEEE
T ss_pred --------CCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCC--------------------Ccchhhhh
Confidence 333446677999999999999999 7999999999999999976 23445678
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC--CCCCEEEEEeCCCcEEE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP--TEPDVFASCSVDGHIAI 303 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp--~~~~~las~s~Dg~I~i 303 (359)
.+|...|.+++|+|.+..+|++|+.|++|++||++...... ....+|...|..++|+| ++. +|++|+.|++|+|
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~i 212 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF---TLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKI 212 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE---EEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEE
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc---eeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEE
Confidence 99999999999999654499999999999999997733222 23346778999999988 455 9999999999999
Q ss_pred EECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 304 WDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
||++++ .++..+.+|...|++++|+|++.+|+.+.. |+.|++||..++++
T Consensus 213 Wd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~----Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 213 WDYQTK-SCVATLEGHMSNVSFAVFHPTLPIIISGSE----DGTLKIWNSSTYKV 262 (304)
T ss_dssp EETTTT-EEEEEEECCSSCEEEEEECSSSSEEEEEET----TSCEEEEETTTCCE
T ss_pred EeCCCC-ccceeeCCCCCCEEEEEECCCCCEEEEEcC----CCeEEEEECCCCce
Confidence 999997 788889999999999999999999988876 99999999988753
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=4.4e-27 Score=213.94 Aligned_cols=202 Identities=14% Similarity=0.225 Sum_probs=170.6
Q ss_pred cceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 018235 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (359)
Q Consensus 68 P~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~ 147 (359)
+..++.|-|+. .+|++|. .++.|.||++.
T Consensus 15 ~V~~~~fsp~~-----------~~l~s~~-----~dg~v~lWd~~----------------------------------- 43 (304)
T 2ynn_A 15 RVKGIDFHPTE-----------PWVLTTL-----YSGRVELWNYE----------------------------------- 43 (304)
T ss_dssp CEEEEEECSSS-----------SEEEEEE-----TTSEEEEEETT-----------------------------------
T ss_pred ceEEEEECCCC-----------CEEEEEc-----CCCcEEEEECC-----------------------------------
Confidence 45688888885 4777777 46799999873
Q ss_pred cCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC
Q 018235 148 EEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG 227 (359)
Q Consensus 148 ~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (359)
.......+..|...|++++|+|++ .+|++++.||+|++||+.. ...+..+.+
T Consensus 44 ------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~---------------------~~~~~~~~~ 95 (304)
T 2ynn_A 44 ------TQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNT---------------------GEKVVDFEA 95 (304)
T ss_dssp ------TTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTT---------------------CCEEEEEEC
T ss_pred ------CCceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCC---------------------CcEEEEEeC
Confidence 344556777899999999999998 8999999999999999987 677889999
Q ss_pred CCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECC
Q 018235 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTR 307 (359)
Q Consensus 228 h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r 307 (359)
|...|.+++|+|++. +|+||+.||+|++||++...... ..+.+|...|.+++|+|.+..+|++|+.|++|+|||++
T Consensus 96 h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~---~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 96 HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALE---QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEE---EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchh---hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999998 99999999999999998743333 56889999999999999655599999999999999999
Q ss_pred CCCCceEEe-ecCCCCEEEEEEcC--CCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 308 VGKSALTSF-KAHNADVNVISWNR--CWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 308 ~~~~~~~~~-~~h~~~V~~i~~s~--~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.. .+...+ ..|...|+.++|+| ++.+++.+.. |+.|++||.+++.
T Consensus 172 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~----D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 172 QS-TPNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTKS 219 (304)
T ss_dssp CS-SCSEEEECCCTTCEEEEEECCSTTCCEEEEEET----TSEEEEEETTTTE
T ss_pred CC-CccceeccCCcCcEEEEEEEEcCCCCEEEEEcC----CCeEEEEeCCCCc
Confidence 87 444454 56778899999987 6678887766 9999999998765
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=3.8e-27 Score=223.52 Aligned_cols=201 Identities=18% Similarity=0.252 Sum_probs=173.0
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-|..++.|.|+. .+|+.|. .++.|.||++.
T Consensus 109 ~~V~~~~~~p~~-----------~~l~s~s-----~Dg~i~vwd~~---------------------------------- 138 (410)
T 1vyh_C 109 SPVTRVIFHPVF-----------SVMVSAS-----EDATIKVWDYE---------------------------------- 138 (410)
T ss_dssp SCEEEEEECSSS-----------SEEEEEE-----SSSCEEEEETT----------------------------------
T ss_pred CcEEEEEEcCCC-----------CEEEEEe-----CCCeEEEEECC----------------------------------
Confidence 466778887774 3677777 46789999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
...+...+.+|.+.|++++|+|++ .+|++|+.||+|+|||+.. ..++.++.
T Consensus 139 -------~~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~---------------------~~~~~~~~ 189 (410)
T 1vyh_C 139 -------TGDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQG---------------------FECIRTMH 189 (410)
T ss_dssp -------TCCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTS---------------------SCEEECCC
T ss_pred -------CCcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCC---------------------CceeEEEc
Confidence 222335667899999999999998 7999999999999999976 56778889
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
+|...|.+++|+|++. +|++|+.|++|++||+++ +... ..+.+|...|.+++|+|++. +|++|+.|++|+|||+
T Consensus 190 ~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~-~~~~---~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQT-GYCV---KTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVV 263 (410)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT-CCEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC-CcEE---EEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEEC
Confidence 9999999999999998 999999999999999987 4444 67889999999999999998 9999999999999999
Q ss_pred CCCCCceEEeecCCCCEEEEEEcCC--------------------CCeEEEEeeecccceEEEEEeCcCCc
Q 018235 307 RVGKSALTSFKAHNADVNVISWNRC--------------------WLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 307 r~~~~~~~~~~~h~~~V~~i~~s~~--------------------~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+++ .+...+..|...|++++|+|+ +.+++.+.. |+.|++||.+++.
T Consensus 264 ~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~----D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 264 ATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR----DKTIKMWDVSTGM 329 (410)
T ss_dssp TTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET----TSEEEEEETTTTE
T ss_pred CCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC----CCeEEEEECCCCc
Confidence 987 777888999999999999996 556777765 8999999998764
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=1e-26 Score=213.52 Aligned_cols=171 Identities=15% Similarity=0.151 Sum_probs=153.0
Q ss_pred CCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceE
Q 018235 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (359)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (359)
.......+..|...+.+++|+|++ .++++++.+|.|++|++.. ......+..|...+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~---------------------~~~~~~~~~~~~~v~ 168 (321)
T 3ow8_A 111 NGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVES---------------------GKKEYSLDTRGKFIL 168 (321)
T ss_dssp TTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTT---------------------CSEEEEEECSSSCEE
T ss_pred CCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCC---------------------CceeEEecCCCceEE
Confidence 334556667899999999999999 7999999999999999987 566778888999999
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
+++|+|++. +|++|+.||.|++||+++ ++.+ ..+.+|...|.+++|+|++. +|++|+.|++|+|||++.. ..+
T Consensus 169 ~~~~spdg~-~lasg~~dg~i~iwd~~~-~~~~---~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~-~~~ 241 (321)
T 3ow8_A 169 SIAYSPDGK-YLASGAIDGIINIFDIAT-GKLL---HTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA-NLA 241 (321)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTT-TEEE---EEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC-CEE
T ss_pred EEEECCCCC-EEEEEcCCCeEEEEECCC-CcEE---EEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc-cee
Confidence 999999998 999999999999999987 4544 56889999999999999998 9999999999999999987 677
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+.+|...|++++|+|++.+|+.+.. |+.|++|+..++.
T Consensus 242 ~~~~~h~~~v~~~~~sp~~~~l~s~s~----D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 242 GTLSGHASWVLNVAFCPDDTHFVSSSS----DKSVKVWDVGTRT 281 (321)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE
T ss_pred EEEcCCCCceEEEEECCCCCEEEEEeC----CCcEEEEeCCCCE
Confidence 888999999999999999999988876 8999999998765
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.9e-26 Score=213.01 Aligned_cols=166 Identities=16% Similarity=0.182 Sum_probs=145.8
Q ss_pred CCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceE
Q 018235 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (359)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (359)
.......+.+|.+.|++++|+|++ .++++++.||.|++||+.. ..++.++.+|...|.
T Consensus 173 ~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~---------------------~~~~~~~~~h~~~v~ 230 (340)
T 1got_B 173 TGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVRE---------------------GMCRQTFTGHESDIN 230 (340)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CSEEEEECCCSSCEE
T ss_pred CCcEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCC---------------------CeeEEEEcCCcCCEE
Confidence 344556777899999999999998 7999999999999999987 567788999999999
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccc--cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF--IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~--~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
+++|+|++. +|++|+.||+|++||++. .... ..+ ..+...|.+++|+|++. +|++|+.||.|+|||+++. .
T Consensus 231 ~v~~~p~~~-~l~s~s~d~~v~iwd~~~-~~~~---~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-~ 303 (340)
T 1got_B 231 AICFFPNGN-AFATGSDDATCRLFDLRA-DQEL---MTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKA-D 303 (340)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTT-TEEE---EEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC-C
T ss_pred EEEEcCCCC-EEEEEcCCCcEEEEECCC-CcEE---EEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccC-c
Confidence 999999998 999999999999999987 3332 222 23445799999999999 9999999999999999987 7
Q ss_pred ceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEe
Q 018235 312 ALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILD 352 (359)
Q Consensus 312 ~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd 352 (359)
.+..+.+|...|++++|+|++.+|+.+.. |+.|++|+
T Consensus 304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~----D~~i~iWd 340 (340)
T 1got_B 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSW----DSFLKIWN 340 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEET----TSCEEEEC
T ss_pred EeeEeecCCCcEEEEEEcCCCCEEEEEcC----CccEEecC
Confidence 77888999999999999999999998876 99999996
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=1.3e-26 Score=219.96 Aligned_cols=198 Identities=18% Similarity=0.312 Sum_probs=169.4
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|+. .+|+.|+ .++.|.||++.
T Consensus 193 ~~V~~v~~~p~~-----------~~l~s~s-----~D~~i~~wd~~---------------------------------- 222 (410)
T 1vyh_C 193 HNVSSVSIMPNG-----------DHIVSAS-----RDKTIKMWEVQ---------------------------------- 222 (410)
T ss_dssp SCEEEEEECSSS-----------SEEEEEE-----TTSEEEEEETT----------------------------------
T ss_pred CCEEEEEEeCCC-----------CEEEEEe-----CCCeEEEEECC----------------------------------
Confidence 355667777763 3677776 46789999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
.......+.+|...|+++.++|++ .++++++.||.|++||+.. ......+.
T Consensus 223 -------~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~---------------------~~~~~~~~ 273 (410)
T 1vyh_C 223 -------TGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVAT---------------------KECKAELR 273 (410)
T ss_dssp -------TCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEEC
T ss_pred -------CCcEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCC---------------------CceeeEec
Confidence 333446677999999999999999 8999999999999999987 56678899
Q ss_pred CCCCceEEEEeCCC--------------------CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC
Q 018235 227 GHKDEGYAIDWNPI--------------------TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP 286 (359)
Q Consensus 227 ~h~~~v~~l~~sp~--------------------~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 286 (359)
+|...+.+++|+|. +. +|++|+.|++|++||+++ +... ..+.+|...|.+++|+|
T Consensus 274 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~-~~~~---~~~~~h~~~v~~v~~~~ 348 (410)
T 1vyh_C 274 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVST-GMCL---MTLVGHDNWVRGVLFHS 348 (410)
T ss_dssp CCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTT-TEEE---EEEECCSSCEEEEEECS
T ss_pred CCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCC-CceE---EEEECCCCcEEEEEEcC
Confidence 99999999999996 44 899999999999999987 4444 57889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 287 ~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
++. +|++|+.||+|+|||++++ .++..+.+|...|++++|+|++.+|+.+.. |+.|++|+.+
T Consensus 349 ~g~-~l~s~s~D~~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~----D~~i~vW~~r 410 (410)
T 1vyh_C 349 GGK-FILSCADDKTLRVWDYKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSV----DQTVKVWECR 410 (410)
T ss_dssp SSS-CEEEEETTTEEEEECCTTS-CCCEEEECCSSCEEEEEECSSSSCEEEEET----TSEEEEEC--
T ss_pred CCC-EEEEEeCCCeEEEEECCCC-ceEEEEcCCCCcEEEEEEcCCCCEEEEEeC----CCcEEEEeCC
Confidence 999 8999999999999999987 788889999999999999999999998876 9999999864
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=1.1e-26 Score=216.38 Aligned_cols=171 Identities=16% Similarity=0.277 Sum_probs=148.8
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
....+|.+.|++++|+|++ .+|++++.||.|+|||+.. ..++..+.+|...|++++|+
T Consensus 133 ~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~---------------------~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 133 FAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQ---------------------KAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp EEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEEEEC
T ss_pred eccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEEEcCCCCCEEEEEEc
Confidence 4566899999999999999 8999999999999999987 57788899999999999999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (359)
+++..+|++++.||+|++||++++ +... ...+..|...|.+++|+|++..+|++|+.|+.|+|||++++ .++..+.+
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~-~~~~-~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-~~~~~~~~ 267 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKP-KPAT-RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-DSAQTSAV 267 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSS-SCBC-BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-GGCEEECC
T ss_pred cCCCceeeeeccCCceEEEECCCC-ceee-eeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-cEeEEEec
Confidence 998778999999999999999874 3321 12345677889999999998779999999999999999998 78888999
Q ss_pred CCCCEEEEEEcCCCC-eEEEEeeecccceEEEEEeCcCCcc
Q 018235 319 HNADVNVISWNRCWL-AVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 319 h~~~V~~i~~s~~~~-~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
|...|++++|+|++. +|+.+.. |+.|++||..++++
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs~----D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASISE----DCTVAVLDADFSEV 304 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEET----TSCEEEECTTSCEE
T ss_pred cceeEEEEEEcCCCCCEEEEEeC----CCEEEEEECCCCcE
Confidence 999999999999985 5665554 89999999988753
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=1.1e-26 Score=216.32 Aligned_cols=202 Identities=18% Similarity=0.201 Sum_probs=166.5
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|. .++.|.||++.
T Consensus 139 ~~~V~~v~~spdg-----------~~l~sgs-----~dg~v~iwd~~--------------------------------- 169 (357)
T 4g56_B 139 DDIVKTLSVFSDG-----------TQAVSGG-----KDFSVKVWDLS--------------------------------- 169 (357)
T ss_dssp SSCEEEEEECSSS-----------SEEEEEE-----TTSCEEEEETT---------------------------------
T ss_pred CCCEEEEEECCCC-----------CEEEEEe-----CCCeEEEEECC---------------------------------
Confidence 4567788888875 4677777 46689999872
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcE--
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV-- 223 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 223 (359)
.+.....+.+|.+.|++++|+|.+..++++++.||.|+|||+.. .++..
T Consensus 170 --------~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~---------------------~~~~~~~ 220 (357)
T 4g56_B 170 --------QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK---------------------PKPATRI 220 (357)
T ss_dssp --------TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS---------------------SSCBCBC
T ss_pred --------CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC---------------------Cceeeee
Confidence 44566677899999999999999877999999999999999987 23322
Q ss_pred EecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 224 ~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
.+..|...+.+++|+|++..+|++|+.|+.|++||+++ +... ..+.+|...|++++|+|++..+||+|+.|++|+|
T Consensus 221 ~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~---~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSA---QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGC---EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEe---EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 34456778999999999766899999999999999987 4443 6788999999999999998769999999999999
Q ss_pred EECCCCCCceEEeecCCCCEEEEEEcC-CCCeEEEEeeecccceEEEEEeCcC
Q 018235 304 WDTRVGKSALTSFKAHNADVNVISWNR-CWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
||++++ +. ....+|...|++|+|+| ++.+|+.+.. |+.|++|++.+
T Consensus 297 wd~~~~-~~-~~~~~H~~~V~~vafsP~d~~~l~s~s~----Dg~v~iW~~~~ 343 (357)
T 4g56_B 297 LDADFS-EV-FRDLSHRDFVTGVAWSPLDHSKFTTVGW----DHKVLHHHLPS 343 (357)
T ss_dssp ECTTSC-EE-EEECCCSSCEEEEEECSSSTTEEEEEET----TSCEEEEECC-
T ss_pred EECCCC-cE-eEECCCCCCEEEEEEeCCCCCEEEEEcC----CCeEEEEECCC
Confidence 999986 44 44558999999999998 6788877765 99999999754
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=5.9e-26 Score=206.59 Aligned_cols=201 Identities=17% Similarity=0.316 Sum_probs=172.4
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|+. .+|++|+ .++.|.||++.
T Consensus 24 ~~v~~~~~s~~~-----------~~l~s~~-----~dg~i~iw~~~---------------------------------- 53 (312)
T 4ery_A 24 KAVSSVKFSPNG-----------EWLASSS-----ADKLIKIWGAY---------------------------------- 53 (312)
T ss_dssp SCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT----------------------------------
T ss_pred CcEEEEEECCCC-----------CEEEEee-----CCCeEEEEeCC----------------------------------
Confidence 466788888875 4777777 46689999762
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
.......+.+|...|++++|+|++ .+|++++.||.|++||+.. ..++..+.
T Consensus 54 -------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~---------------------~~~~~~~~ 104 (312)
T 4ery_A 54 -------DGKFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSS---------------------GKCLKTLK 104 (312)
T ss_dssp -------TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------CCEEEEEE
T ss_pred -------CcccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCC---------------------CcEEEEEc
Confidence 223445667899999999999998 8999999999999999987 56778899
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
+|...+.+++|+|++. +|++|+.||.|++||+++ +... ..+..|...|.+++|+|++. +|++|+.||.|++||+
T Consensus 105 ~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~-~~~~---~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 105 GHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKT-GKCL---KTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 178 (312)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT-CCEE---EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CEEE---EEecCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEC
Confidence 9999999999999998 999999999999999987 4443 56788999999999999998 9999999999999999
Q ss_pred CCCCCceEEe-ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 307 RVGKSALTSF-KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 307 r~~~~~~~~~-~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+++ ..+..+ ..+...+.+++|+|++.+++.+.. ++.|++||.+++.
T Consensus 179 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~ 225 (312)
T 4ery_A 179 ASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATL----DNTLKLWDYSKGK 225 (312)
T ss_dssp TTC-CEEEEECCSSCCCEEEEEECTTSSEEEEEET----TTEEEEEETTTTE
T ss_pred CCC-ceeeEEeccCCCceEEEEECCCCCEEEEEcC----CCeEEEEECCCCc
Confidence 987 555555 567788999999999999998876 8999999998764
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=214.22 Aligned_cols=205 Identities=14% Similarity=0.258 Sum_probs=167.9
Q ss_pred cceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 018235 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (359)
Q Consensus 68 P~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~ 147 (359)
++..+.|-|+. .+|+.|. .++.|.||++..
T Consensus 18 ~v~~l~~sp~g-----------~~las~~-----~D~~i~iw~~~~---------------------------------- 47 (345)
T 3fm0_A 18 RCWFLAWNPAG-----------TLLASCG-----GDRRIRIWGTEG---------------------------------- 47 (345)
T ss_dssp CEEEEEECTTS-----------SCEEEEE-----TTSCEEEEEEET----------------------------------
T ss_pred cEEEEEECCCC-----------CEEEEEc-----CCCeEEEEEcCC----------------------------------
Confidence 57788998885 3677776 467899999841
Q ss_pred cCCCCCCCeEE-EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 148 EEGGSGTPILQ-LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 148 ~~~~~~~~~~~-~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
...... ....+|.+.|++++|+|++ .+||+++.|++|+||++... ....+..+.
T Consensus 48 -----~~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~-------------------~~~~~~~~~ 102 (345)
T 3fm0_A 48 -----DSWICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQD-------------------DFECVTTLE 102 (345)
T ss_dssp -----TEEEEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC--------------------EEEEEEEC
T ss_pred -----CcceeeeeeccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCC-------------------CeEEEEEcc
Confidence 011112 2235799999999999999 89999999999999998762 124567889
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
+|...|.+++|+|++. +|++|+.|++|++||++...... ....+.+|...|.+++|+|++. +|++|+.|++|+|||+
T Consensus 103 ~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 103 GHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYE-CVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYRE 179 (345)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEE-EEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEE
T ss_pred CCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeE-EEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEe
Confidence 9999999999999998 99999999999999998743221 1256788999999999999998 9999999999999999
Q ss_pred CCCC-CceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 307 RVGK-SALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 307 r~~~-~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+... .+...+.+|...|++++|+|++.+|+.+.. |+.|++|+..
T Consensus 180 ~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~----D~~v~iW~~~ 224 (345)
T 3fm0_A 180 EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD----DRTVRIWRQY 224 (345)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEEEE
T ss_pred cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC----CCeEEEeccc
Confidence 8762 234567899999999999999999988876 9999999853
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=6e-26 Score=207.93 Aligned_cols=207 Identities=14% Similarity=0.188 Sum_probs=172.3
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|+. ..+|+.|+ .++.|.||++..-.
T Consensus 18 ~~V~~l~~~~~~----------~~~l~s~s-----~D~~v~~W~~~~~~------------------------------- 51 (319)
T 3frx_A 18 GWVTSLATSAGQ----------PNLLLSAS-----RDKTLISWKLTGDD------------------------------- 51 (319)
T ss_dssp SCEEEEEECSSC----------TTEEEEEE-----TTSEEEEEEEEEET-------------------------------
T ss_pred ceEEEEEccCCC----------ccEEEEec-----CCccEEEecCCCCC-------------------------------
Confidence 355677787753 13677777 57899999984100
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
.+.......+.+|...|++++|+|++ .++++++.||+|+|||+.. .+++..+.
T Consensus 52 -----~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~---------------------~~~~~~~~ 104 (319)
T 3frx_A 52 -----QKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVAT---------------------GETYQRFV 104 (319)
T ss_dssp -----TEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEE
T ss_pred -----ccccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCC---------------------CCeeEEEc
Confidence 01223345677999999999999999 8999999999999999987 56778899
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCC-----CEEEEEeCCCcE
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP-----DVFASCSVDGHI 301 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-----~~las~s~Dg~I 301 (359)
+|...|.+++|+|++. +|++|+.|++|++||++. ... ..+.+|...|.+++|+|... .+|++++.|+.|
T Consensus 105 ~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~--~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 105 GHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG--QCL---ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp CCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS--CEE---EEECCCSSCEEEEEECCC------CCEEEEEETTSCE
T ss_pred cCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC--CeE---EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 9999999999999998 999999999999999964 333 56789999999999999642 389999999999
Q ss_pred EEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 302 AIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 302 ~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++||++.. .....+.+|...|++++|+|++.+|+.+.. |+.|++||..++.
T Consensus 179 ~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~----dg~i~iwd~~~~~ 229 (319)
T 3frx_A 179 KAWNLNQF-QIEADFIGHNSNINTLTASPDGTLIASAGK----DGEIMLWNLAAKK 229 (319)
T ss_dssp EEEETTTT-EEEEEECCCCSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTE
T ss_pred EEEECCcc-hhheeecCCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCc
Confidence 99999987 667778899999999999999999998876 9999999998764
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=1e-25 Score=208.32 Aligned_cols=169 Identities=23% Similarity=0.357 Sum_probs=145.4
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
.....+.+|.+.|++++|+|++ .++++++.||+|+|||+.. ...+..+.+|...|+++
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~---------------------~~~~~~~~~h~~~v~~v 124 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRT---------------------GTTYKRFVGHQSEVYSV 124 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTS---------------------SCEEEEEECCCSCEEEE
T ss_pred cccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCC---------------------CcEEEEEcCCCCcEEEE
Confidence 3446678999999999999998 7999999999999999987 56778899999999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCC---------CEEEEEeCCCcEEEEEC
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP---------DVFASCSVDGHIAIWDT 306 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~---------~~las~s~Dg~I~iwD~ 306 (359)
+|+|++. +|++|+.|++|++||+.. .. ........+|...|.+++|+|.+. .+|++++.||.|+|||.
T Consensus 125 ~~sp~~~-~l~s~~~d~~i~~wd~~~-~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 201 (343)
T 2xzm_R 125 AFSPDNR-QILSAGAEREIKLWNILG-EC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT 201 (343)
T ss_dssp EECSSTT-EEEEEETTSCEEEEESSS-CE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET
T ss_pred EECCCCC-EEEEEcCCCEEEEEeccC-Cc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC
Confidence 9999998 999999999999999974 22 211233457999999999999872 38999999999999995
Q ss_pred CCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 307 RVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 307 r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
+. .....+.+|...|++++|+|++.+|+.+.. |+.|++||...
T Consensus 202 ~~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~----dg~v~iwd~~~ 244 (343)
T 2xzm_R 202 NF--QIRYTFKAHESNVNHLSISPNGKYIATGGK----DKKLLIWDILN 244 (343)
T ss_dssp TT--EEEEEEECCSSCEEEEEECTTSSEEEEEET----TCEEEEEESSC
T ss_pred CC--ceeEEEcCccccceEEEECCCCCEEEEEcC----CCeEEEEECCC
Confidence 43 566678899999999999999999998876 99999999843
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=9.6e-26 Score=208.34 Aligned_cols=168 Identities=18% Similarity=0.373 Sum_probs=146.7
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
.+...+.+|.+.|.+++|++.+ .+++++.||.|++||+.. ..++.++.+|...|.++
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~---------------------~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIET---------------------GQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEE
T ss_pred eeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCC---------------------CcEEEEEcCCCCceEEE
Confidence 4556778999999999999987 588899999999999987 56778899999999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
+|+|++. +|++|+.||+|++||+++ +... ..+.+|...|++++|+|++. +|++|+.||+|+|||++.. ..+..
T Consensus 191 ~~~~~~~-~l~sg~~d~~v~~wd~~~-~~~~---~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~-~~~~~ 263 (340)
T 1got_B 191 SLAPDTR-LFVSGACDASAKLWDVRE-GMCR---QTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRAD-QELMT 263 (340)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTT-CSEE---EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT-EEEEE
T ss_pred EECCCCC-EEEEEeCCCcEEEEECCC-CeeE---EEEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCC-cEEEE
Confidence 9999998 999999999999999987 4444 57889999999999999998 9999999999999999987 55555
Q ss_pred ee--cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 316 FK--AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 316 ~~--~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+. .+...|.+++|+|++.+++.+.. ++.|++||..++.
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~----d~~i~vwd~~~~~ 303 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGRLLLAGYD----DFNCNVWDALKAD 303 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC
T ss_pred EccCCcccceEEEEECCCCCEEEEECC----CCeEEEEEcccCc
Confidence 53 33457999999999999998876 8999999987654
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.5e-26 Score=210.52 Aligned_cols=171 Identities=16% Similarity=0.307 Sum_probs=135.7
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
|.+.|++++|+|++ .+||+++.||+|+||++....... ....++..+.+|...|++++|+|++.
T Consensus 57 h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~--------------~~~~~~~~~~~h~~~V~~v~~sp~g~- 120 (330)
T 2hes_X 57 HKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRT--------------FEMDLLAIIEGHENEVKGVAWSNDGY- 120 (330)
T ss_dssp CCSCEEEEEECTTS-SEEEEEETTSCEEEEEC---------------------CCCEEEEEEC----CEEEEEECTTSC-
T ss_pred ccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCcc--------------ccceeEEEEcCCCCcEEEEEECCCCC-
Confidence 99999999999998 899999999999999986411000 01345678899999999999999998
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC-CceEEeecCCCC
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNAD 322 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~-~~~~~~~~h~~~ 322 (359)
+|++|+.|++|++||++..+........+.+|...|.+++|+|++. +|++|+.|++|+|||.+... .++..+.+|...
T Consensus 121 ~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~ 199 (330)
T 2hes_X 121 YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT 199 (330)
T ss_dssp EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSC
T ss_pred EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc
Confidence 9999999999999999643321111256789999999999999998 99999999999999988652 356778899999
Q ss_pred EEEEEEcCC--CCeEEEEeeecccceEEEEEeCcC
Q 018235 323 VNVISWNRC--WLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 323 V~~i~~s~~--~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
|++++|+|+ +..++.+.. |+.|++|+...
T Consensus 200 v~~~~~~~~~~~~~l~s~s~----D~~v~iw~~~~ 230 (330)
T 2hes_X 200 VWSSDFDKTEGVFRLCSGSD----DSTVRVWKYMG 230 (330)
T ss_dssp EEEEEECCSSSSCEEEEEET----TSCEEEEEEEE
T ss_pred EEEEEecCCCCeeEEEEEeC----CCeEEEEEecC
Confidence 999999998 556776655 89999998754
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=6.6e-26 Score=205.46 Aligned_cols=208 Identities=17% Similarity=0.219 Sum_probs=164.8
Q ss_pred cceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 018235 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (359)
Q Consensus 68 P~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~ 147 (359)
+..++.|-|+. .+|+.|. .++.|+||++..
T Consensus 11 ~V~~~~~s~~g-----------~~las~s-----~D~~v~iw~~~~---------------------------------- 40 (297)
T 2pm7_B 11 MIHDAVMDYYG-----------KRMATCS-----SDKTIKIFEVEG---------------------------------- 40 (297)
T ss_dssp CEEEEEECTTS-----------SEEEEEE-----TTSCEEEEEBCS----------------------------------
T ss_pred ceEEEEECCCC-----------CEEEEEe-----CCCEEEEEecCC----------------------------------
Confidence 55677777774 4778777 577899998831
Q ss_pred cCCCCCCCeEEEEEecCCCceeeEEEeCC-CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 148 EEGGSGTPILQLRKVAHQGCVNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 148 ~~~~~~~~~~~~~~~~H~~~V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
....+...+.+|.+.|++++|+|. ...+|||++.||+|+|||+... ....+..+.
T Consensus 41 -----~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~-------------------~~~~~~~~~ 96 (297)
T 2pm7_B 41 -----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG-------------------RWSQIAVHA 96 (297)
T ss_dssp -----SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS-------------------CBCCCEEEC
T ss_pred -----CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC-------------------ceEEEEEee
Confidence 012233567799999999999864 2379999999999999999761 124567788
Q ss_pred CCCCceEEEEeCCC--CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCC------------CCEE
Q 018235 227 GHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE------------PDVF 292 (359)
Q Consensus 227 ~h~~~v~~l~~sp~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~------------~~~l 292 (359)
+|...|.+++|+|+ +. +|++|+.||+|++||++...... ...+.+|...|.+++|+|.+ ..+|
T Consensus 97 ~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~--~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 97 VHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC--CEEEECCSSCEEEEEECCCC------------CCEE
T ss_pred cCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee--eeeeecccCccceEeecCCcccccccCCCCCCcceE
Confidence 99999999999998 65 99999999999999998743322 24577899999999999973 2389
Q ss_pred EEEeCCCcEEEEECCCCCC---ceEEeecCCCCEEEEEEcCCC---CeEEEEeeecccceEEEEEeCcCC
Q 018235 293 ASCSVDGHIAIWDTRVGKS---ALTSFKAHNADVNVISWNRCW---LAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 293 as~s~Dg~I~iwD~r~~~~---~~~~~~~h~~~V~~i~~s~~~---~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
|+|+.|++|+|||++.... ....+.+|...|++++|+|++ .+|+.+.. |+.|++|+...+
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~----D~~v~iWd~~~~ 239 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ----DRTCIIWTQDNE 239 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET----TSCEEEEEESST
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC----CCcEEEEEeCCC
Confidence 9999999999999987622 345678999999999999985 66776655 899999998753
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=2.2e-25 Score=207.29 Aligned_cols=166 Identities=16% Similarity=0.176 Sum_probs=144.2
Q ss_pred CeEEEEEecCCCceeeEEEeCCC-CcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceE
Q 018235 155 PILQLRKVAHQGCVNRIRAMTQN-PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (359)
Q Consensus 155 ~~~~~~~~~H~~~V~~i~~~p~~-~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (359)
..+...+.+|...|+++.++|.. ..+|++++.||.|++||+.. ..++..+.+|...|.
T Consensus 186 ~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---------------------~~~~~~~~~h~~~v~ 244 (354)
T 2pbi_B 186 GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS---------------------GQCVQAFETHESDVN 244 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEE
T ss_pred CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC---------------------CcEEEEecCCCCCeE
Confidence 34556777999999999998853 27999999999999999987 577888999999999
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCcccc--CCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI--GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
+++|+|++. +|++|+.|++|++||++.. ... ..+. .+...+.+++|+|++. +|++|+.|+.|+|||++++ .
T Consensus 245 ~v~~~p~~~-~l~s~s~D~~v~lwd~~~~-~~~---~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-~ 317 (354)
T 2pbi_B 245 SVRYYPSGD-AFASGSDDATCRLYDLRAD-REV---AIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKG-S 317 (354)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTTT-EEE---EEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC-S
T ss_pred EEEEeCCCC-EEEEEeCCCeEEEEECCCC-cEE---EEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCC-c
Confidence 999999998 9999999999999999873 322 2232 2345789999999999 9999999999999999987 6
Q ss_pred ceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEe
Q 018235 312 ALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILD 352 (359)
Q Consensus 312 ~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd 352 (359)
.+..+.+|...|++++|+|++.+|+.+.. |+.|++|+
T Consensus 318 ~~~~l~~h~~~v~~l~~spdg~~l~sgs~----D~~v~vW~ 354 (354)
T 2pbi_B 318 RVSILFGHENRVSTLRVSPDGTAFCSGSW----DHTLRVWA 354 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEET----TSEEEEEC
T ss_pred eEEEEECCCCcEEEEEECCCCCEEEEEcC----CCCEEecC
Confidence 77888999999999999999999998876 99999995
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=3.8e-25 Score=205.67 Aligned_cols=208 Identities=19% Similarity=0.212 Sum_probs=173.1
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|. .++.|.||++.
T Consensus 64 ~~~V~~~~~s~d~-----------~~l~s~s-----~Dg~v~vWd~~--------------------------------- 94 (354)
T 2pbi_B 64 GNKVLCMDWCKDK-----------RRIVSSS-----QDGKVIVWDSF--------------------------------- 94 (354)
T ss_dssp SSCEEEEEECTTS-----------SEEEEEE-----TTSEEEEEETT---------------------------------
T ss_pred CCeEEEEEECCCC-----------CEEEEEe-----CCCeEEEEECC---------------------------------
Confidence 3467889998885 4788887 57799999862
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.......+..|...|.+++|+|++ .++|+++.|+.|++|++....... .......+
T Consensus 95 --------~~~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~~---------------~~~~~~~~ 150 (354)
T 2pbi_B 95 --------TTNKEHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNEN---------------MAAKKKSV 150 (354)
T ss_dssp --------TCCEEEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTCC---------------SGGGCEEE
T ss_pred --------CCCcceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEecccccc---------------ccccceee
Confidence 223335566789999999999999 899999999999999987521100 12345677
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCC-CCEEEEEeCCCcEEEE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE-PDVFASCSVDGHIAIW 304 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~las~s~Dg~I~iw 304 (359)
.+|...+.+++|+|++. .|++|+.|++|++||+++ ++.. ..+.+|...|.+++|+|.. ..+|++|+.||+|++|
T Consensus 151 ~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~-~~~~---~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSDM-QILTASGDGTCALWDVES-GQLL---QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp EECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT-CCEE---EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred eccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCC-CeEE---EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 89999999999999998 999999999999999987 4544 6788999999999999853 2399999999999999
Q ss_pred ECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 305 DTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
|++++ .++..+..|...|++++|+|++.+++.+.. |+.|++||.+.+
T Consensus 226 d~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~v~lwd~~~~ 272 (354)
T 2pbi_B 226 DMRSG-QCVQAFETHESDVNSVRYYPSGDAFASGSD----DATCRLYDLRAD 272 (354)
T ss_dssp ETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT
T ss_pred ECCCC-cEEEEecCCCCCeEEEEEeCCCCEEEEEeC----CCeEEEEECCCC
Confidence 99998 788888999999999999999999988876 899999998765
No 22
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=3.1e-25 Score=201.79 Aligned_cols=171 Identities=21% Similarity=0.325 Sum_probs=154.6
Q ss_pred CCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceE
Q 018235 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (359)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (359)
...+...+.+|.+.|++++|+|++ .++|+++.||.|++|++.. .+....+.+|...|.
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~---------------------~~~~~~~~~h~~~v~ 69 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYD---------------------GKFEKTISGHKLGIS 69 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEE
T ss_pred CceeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCC---------------------cccchhhccCCCceE
Confidence 445667888999999999999999 7999999999999999876 566778899999999
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
+++|+|++. +|++|+.||.|++||+++ +... ..+.+|...|.+++|+|++. +|++|+.|+.|++||++++ .++
T Consensus 70 ~~~~~~~~~-~l~s~~~d~~i~vwd~~~-~~~~---~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~-~~~ 142 (312)
T 4ery_A 70 DVAWSSDSN-LLVSASDDKTLKIWDVSS-GKCL---KTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTG-KCL 142 (312)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTT-CCEE---EEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTC-CEE
T ss_pred EEEEcCCCC-EEEEECCCCEEEEEECCC-CcEE---EEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC-EEE
Confidence 999999998 999999999999999987 4444 56889999999999999998 9999999999999999987 778
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+..|...|.+++|+|++.+++.+.. ++.|++||.+++.
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~ 182 (312)
T 4ery_A 143 KTLPAHSDPVSAVHFNRDGSLIVSSSY----DGLCRIWDTASGQ 182 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCC
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEeC----CCcEEEEECCCCc
Confidence 888899999999999999999988876 8899999998764
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=7.8e-26 Score=212.23 Aligned_cols=216 Identities=18% Similarity=0.235 Sum_probs=174.1
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|+ .+..|.||++.
T Consensus 66 ~~~V~~~~~sp~~-----------~~l~s~s-----~D~~v~iWd~~--------------------------------- 96 (380)
T 3iz6_a 66 SGKVYSLDWTPEK-----------NWIVSAS-----QDGRLIVWNAL--------------------------------- 96 (380)
T ss_dssp SSCEEEEEECTTS-----------SCEEEEE-----TTSEEEEEETT---------------------------------
T ss_pred ccEEEEEEEcCCC-----------CEEEEEe-----CCCeEEEEECC---------------------------------
Confidence 4567889999885 4688887 46799999872
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.......+..|...|.+++|+|++ .++|+++.|+.|+||++....... ........+
T Consensus 97 --------~~~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~v~iw~~~~~~~~~--------------~~~~~~~~~ 153 (380)
T 3iz6_a 97 --------TSQKTHAIKLHCPWVMECAFAPNG-QSVACGGLDSACSIFNLSSQADRD--------------GNMPVSRVL 153 (380)
T ss_dssp --------TTEEEEEEECCCTTCCCCEECTTS-SEEEECCSSSCCEEEECCCCSSCC--------------CSSTTCCBC
T ss_pred --------CCccceEEecCCCCEEEEEECCCC-CEEEEeeCCCcEEEEECCCCcccc--------------CCccceeec
Confidence 334556777899999999999999 899999999999999997621100 012344568
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCccee-cCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV-DPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~-~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iw 304 (359)
.+|...+.++.|+|.+..+|+||+.|++|++||++++..... ......+|...|.+++|+|....+|++|+.|++|+||
T Consensus 154 ~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~w 233 (380)
T 3iz6_a 154 TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLW 233 (380)
T ss_dssp CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEE
T ss_pred cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEE
Confidence 899999999999998766899999999999999987432211 0111267999999999998555599999999999999
Q ss_pred ECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 305 DTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|++....++..+.+|...|++++|+|++.+++.+.. |+.|++||.+++.
T Consensus 234 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 234 DLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSD----DGTCRLFDMRTGH 282 (380)
T ss_dssp ETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECS----SSCEEEEETTTTE
T ss_pred ECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcC----CCeEEEEECCCCc
Confidence 999654677888999999999999999999988876 9999999998764
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=1.5e-25 Score=210.38 Aligned_cols=165 Identities=16% Similarity=0.236 Sum_probs=141.8
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
.+|...|.++.|++.+..+|++|+.||+|++||++. ...++..+.+|...|++++|+|++
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~--------------------~~~~~~~~~~h~~~v~~v~~~p~~ 261 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI--------------------TSRAVRTYHGHEGDINSVKFFPDG 261 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT--------------------TCCCCEEECCCSSCCCEEEECTTS
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC--------------------CCcceEEECCcCCCeEEEEEecCC
Confidence 479999999999885558999999999999999985 256788999999999999999999
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccC-------CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceE
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-------HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-------h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~ 314 (359)
. +|+||+.||+|++||++++ ... ..+.. +...|.+++|+|++. +|++|+.||.|+|||+..+ ..+.
T Consensus 262 ~-~l~s~s~D~~i~lwd~~~~-~~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~-~~~~ 334 (380)
T 3iz6_a 262 Q-RFGTGSDDGTCRLFDMRTG-HQL---QVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLA-EMVL 334 (380)
T ss_dssp S-EEEEECSSSCEEEEETTTT-EEE---EEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTC-CEEE
T ss_pred C-eEEEEcCCCeEEEEECCCC-cEE---EEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCC-ceEE
Confidence 8 9999999999999999873 332 22222 334589999999999 9999999999999999987 5555
Q ss_pred Ee----ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 315 SF----KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 315 ~~----~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.+ .+|...|++++|+|++.+|+.+.. |+.|++|+...+.
T Consensus 335 ~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~----D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 335 NLGTLQNSHEGRISCLGLSSDGSALCTGSW----DKNLKIWAFSGHR 377 (380)
T ss_dssp EECCSCSSCCCCCCEEEECSSSSEEEEECT----TSCEEEEECCSSS
T ss_pred EEecccCCCCCceEEEEECCCCCEEEEeeC----CCCEEEEecCCCc
Confidence 55 679999999999999999988876 9999999987654
No 25
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.9e-25 Score=218.08 Aligned_cols=238 Identities=10% Similarity=0.041 Sum_probs=170.8
Q ss_pred hcccccCcceeEEEEeccCCCCcccCCceEEEEEeec--------------CCCCCCceEEEEEeeccCCcccCCCCCCC
Q 018235 61 HAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQ--------------AEKPSWNSIGVFKVSNISGKRRELVPNKP 126 (359)
Q Consensus 61 ~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~--------------~~~~~~n~l~i~~~~~l~~~~~~~~~~~~ 126 (359)
..+.++.+..+++|.|+..+.... ...++|++|+. ++...++.|.||++..-
T Consensus 128 ~~~~~~~~V~sv~w~p~~~~~~~~--~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~------------ 193 (524)
T 2j04_B 128 FIYNVGGLVTDIAWLNIEENTDIG--KDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS------------ 193 (524)
T ss_dssp EEEECCC--CCCSCEEECCCCSSC--SSEEEEEEEEEC------------------CEEEEEEEEETT------------
T ss_pred EEEECCCceeEEEecccCCCCccC--cCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC------------
Confidence 345568899999999985321100 01368888873 33456788999988410
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEeCCC-----CcEEEEEeCCCcEEEEECCCCccc
Q 018235 127 SNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQN-----PHICASWADTGHVQVWDLRSHLNA 201 (359)
Q Consensus 127 ~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~-----~~~lat~s~dg~V~iwd~~~~~~~ 201 (359)
+ ....+...+..|.+.|++++|+|.+ ..+||+++.||+|+|||+......
T Consensus 194 ---------------------~----~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 194 ---------------------T----LHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp ---------------------T----CCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred ---------------------C----CCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 0 0122234456788999999999972 269999999999999999763110
Q ss_pred cccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEE
Q 018235 202 LAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281 (359)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~ 281 (359)
..... ....+..++.+|...|++++|++.+ .|++|+.||+|++||++++..+. ..+.+|...|.+
T Consensus 249 ~~~~~----------~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~---~~~~~H~~~V~s 313 (524)
T 2j04_B 249 VHVFK----------MCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPS---FYDQVHDSYILS 313 (524)
T ss_dssp SSEEE----------CCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCS---EEEECSSSCEEE
T ss_pred cccce----------eecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCce---EEeecccccEEE
Confidence 00000 0135667899999999999999853 89999999999999998643322 457899999999
Q ss_pred E--EecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCC--CEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 282 L--QWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA--DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 282 v--~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~--~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
| .|+|++..+|||||.|++|+|||++++ .++..+.+|.. .|++++|+|++..++.+.. +..|++|+.+.+.
T Consensus 314 v~~~~s~~g~~~laS~S~D~tvklWD~~~~-~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~----d~tv~lwd~~~~~ 388 (524)
T 2j04_B 314 VSTAYSDFEDTVVSTVAVDGYFYIFNPKDI-ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG----ASSLRAVPSRAAF 388 (524)
T ss_dssp EEEECCTTSCCEEEEEETTSEEEEECGGGH-HHHCEEEEECSCCSCCCEEEETTTTEEEEECS----SSEEEEEETTCTT
T ss_pred EEEEcCCCCCeEEEEeccCCeEEEEECCCC-CcccccccccccCcccceEeCCCcCeEEEeCC----CCcEEEEECcccc
Confidence 9 578887349999999999999999987 56666666653 5889999999998887765 8889999998765
No 26
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=5.6e-25 Score=200.81 Aligned_cols=220 Identities=16% Similarity=0.188 Sum_probs=170.7
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
=+..++.|.|+. .+|++|+ .++.|.||++..-
T Consensus 12 ~~v~~~~~~~~~-----------~~l~~~~-----~dg~i~iw~~~~~-------------------------------- 43 (351)
T 3f3f_A 12 DLVHDVVYDFYG-----------RHVATCS-----SDQHIKVFKLDKD-------------------------------- 43 (351)
T ss_dssp SCEEEEEECSSS-----------SEEEEEE-----TTSEEEEEEECSS--------------------------------
T ss_pred cceeEEEEcCCC-----------CEEEEee-----CCCeEEEEECCCC--------------------------------
Confidence 467788888875 4777777 4679999998310
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCC--CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
.....+...+.+|.+.|++++|+|. + .+|++++.||.|++||+......... ....++..
T Consensus 44 -----~~~~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~------------~~~~~~~~ 105 (351)
T 3f3f_A 44 -----TSNWELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECSG------------RRWNKLCT 105 (351)
T ss_dssp -----SCCEEEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTSS------------CSEEEEEE
T ss_pred -----CCcceecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCcccccc------------cCcceeee
Confidence 0133455677789999999999994 5 79999999999999999872110000 01145778
Q ss_pred ecCCCCceEEEEeCCC--CCCeEEEEcCCCcEEEEecCCCCcce------------------------------------
Q 018235 225 FGGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWN------------------------------------ 266 (359)
Q Consensus 225 ~~~h~~~v~~l~~sp~--~~~~l~sgs~dg~I~lwd~~~~~~~~------------------------------------ 266 (359)
+.+|...+.+++|+|+ +. +|++|+.||.|++||++......
T Consensus 106 ~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 184 (351)
T 3f3f_A 106 LNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK 184 (351)
T ss_dssp ECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE
T ss_pred ecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE
Confidence 8899999999999999 77 99999999999999987532100
Q ss_pred --------------------ecCccccCCCCCeEEEEecCCCC---CEEEEEeCCCcEEEEECCCCC-------------
Q 018235 267 --------------------VDPNPFIGHSASVEDLQWSPTEP---DVFASCSVDGHIAIWDTRVGK------------- 310 (359)
Q Consensus 267 --------------------~~~~~~~~h~~~V~~v~~sp~~~---~~las~s~Dg~I~iwD~r~~~------------- 310 (359)
.....+.+|...|.+++|+|++. .+|++|+.||.|+|||++...
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 264 (351)
T 3f3f_A 185 LAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSN 264 (351)
T ss_dssp EEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------
T ss_pred EEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccccee
Confidence 00234567999999999999982 399999999999999998741
Q ss_pred --------------------------------CceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 311 --------------------------------SALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 311 --------------------------------~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+..+.+|...|++++|+|++.+|+.+.. |+.|++|+..++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 265 MFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGD----DGKVRLWKATYSN 339 (351)
T ss_dssp --------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEET----TSCEEEEEECTTS
T ss_pred ccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecC----CCcEEEEecCcCc
Confidence 244556789999999999999999998876 8999999998764
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=1.3e-25 Score=214.45 Aligned_cols=171 Identities=15% Similarity=0.107 Sum_probs=140.8
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec--CCCCceE
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGY 233 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~ 233 (359)
.......+|.+.|++|+|+|.+..+|+|++.||+|+|||+... ....... .+...+.
T Consensus 155 ~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~---------------------~~~~~~~~~~~~~~~~ 213 (435)
T 4e54_B 155 PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN---------------------ILRVFASSDTINIWFC 213 (435)
T ss_dssp CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC---------------------EEEEEECCSSCSCCCC
T ss_pred eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC---------------------ceeEEeccCCCCccEE
Confidence 3445677999999999999965589999999999999999761 1111222 2334678
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC--
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS-- 311 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~-- 311 (359)
+++|+|++. +|++|+.||.|++||++. ..+ ..+.+|...|.+++|+|.+..+|++|+.|++|+|||++....
T Consensus 214 ~~~~~~~~~-~l~~g~~dg~i~~wd~~~--~~~---~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 214 SLDVSASSR-MVVTGDNVGNVILLNMDG--KEL---WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp CEEEETTTT-EEEEECSSSBEEEEESSS--CBC---CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred EEEECCCCC-EEEEEeCCCcEeeeccCc--cee---EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence 999999998 999999999999999864 222 568899999999999999988999999999999999998622
Q ss_pred ceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 312 ALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 312 ~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.+....+|...|++++|+|++.+|+.+.. |+.|++|+...+.
T Consensus 288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~----D~~i~iwd~~~~~ 329 (435)
T 4e54_B 288 SFLYSLPHRHPVNAACFSPDGARLLTTDQ----KSEIRVYSASQWD 329 (435)
T ss_dssp CCSBCCBCSSCEEECCBCTTSSEEEEEES----SSCEEEEESSSSS
T ss_pred eEEEeeeccccccceeECCCCCeeEEEcC----CCEEEEEECCCCc
Confidence 22334689999999999999999998876 8999999998764
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=1e-24 Score=220.28 Aligned_cols=174 Identities=17% Similarity=0.248 Sum_probs=151.2
Q ss_pred CeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEE
Q 018235 155 PILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234 (359)
Q Consensus 155 ~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 234 (359)
......+.+|.+.|++++|+|++ .+|+||+.||+|+|||+.. ...+..+.+|...|.+
T Consensus 420 ~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~---------------------~~~~~~~~~h~~~v~~ 477 (694)
T 3dm0_A 420 GVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAA---------------------GVSTRRFVGHTKDVLS 477 (694)
T ss_dssp CEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEECCSSCEEE
T ss_pred ccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCC---------------------CcceeEEeCCCCCEEE
Confidence 34556778999999999999999 8999999999999999987 5667789999999999
Q ss_pred EEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCC-CEEEEEeCCCcEEEEECCCCCCce
Q 018235 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP-DVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 235 l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
++|+|++. +|+||+.|++|++||+.. ...........+|...|.+++|+|++. .+|++|+.|++|+|||++.. ...
T Consensus 478 ~~~s~~~~-~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-~~~ 554 (694)
T 3dm0_A 478 VAFSLDNR-QIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC-KLR 554 (694)
T ss_dssp EEECTTSS-CEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC-CEE
T ss_pred EEEeCCCC-EEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC-cEE
Confidence 99999998 999999999999999865 222211233467999999999999873 48999999999999999987 677
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+.+|...|++++|+|++.+++.+.. |+.|++||.+++.
T Consensus 555 ~~~~~h~~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 555 STLAGHTGYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEGK 594 (694)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET----TSBCEEEETTTTE
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCCc
Confidence 788999999999999999999998876 8999999998765
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=6.6e-25 Score=218.62 Aligned_cols=189 Identities=17% Similarity=0.289 Sum_probs=150.0
Q ss_pred EEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCcc----cccccccc-------------ccCCCC-----C
Q 018235 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLN----ALAESETI-------------VGQGAP-----Q 215 (359)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~----~~~~~~~~-------------~~~~~~-----~ 215 (359)
...+.+|.+.|++++|+|++ .+||+|+.||+|+|||+..... .+...... .....+ .
T Consensus 52 ~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred CeEecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 35567999999999999999 8999999999999999853211 11110000 000000 0
Q ss_pred C---CCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEE
Q 018235 216 V---SNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVF 292 (359)
Q Consensus 216 ~---~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~l 292 (359)
+ ........+.+|...|++++|+|++..+|++|+.|++|++||... .+.. ..+.+|...|.+++|+|++. +|
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~---~~l~~H~~~V~~v~fspdg~-~l 205 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFK---STFGEHTKFVHSVRYNPDGS-LF 205 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEE---EEECCCSSCEEEEEECTTSS-EE
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-CeEe---eeeccccCceEEEEECCCCC-EE
Confidence 0 123445567899999999999999875699999999999999866 4443 57889999999999999999 99
Q ss_pred EEEeCCCcEEEEECCCCCCceEEee-------cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 293 ASCSVDGHIAIWDTRVGKSALTSFK-------AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 293 as~s~Dg~I~iwD~r~~~~~~~~~~-------~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|+|+.|++|+|||++++ .++..+. +|...|++++|+|++.+|+.+.. |+.|++||..++.
T Consensus 206 as~s~D~~i~lwd~~~g-~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~----D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDG-TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA----DKTIKIWNVATLK 272 (611)
T ss_dssp EEEETTSCEEEEETTTC-CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTTE
T ss_pred EEEECCCcEEEEECCCC-cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC----CCeEEEEeCCCCc
Confidence 99999999999999987 6666663 79999999999999999988876 9999999998764
No 30
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=6e-26 Score=211.62 Aligned_cols=209 Identities=12% Similarity=0.153 Sum_probs=161.7
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-|..++.|.|+. .+|++|+ .++.|.||++..
T Consensus 12 ~~v~~~~~s~~g-----------~~l~~~~-----~d~~i~iw~~~~--------------------------------- 42 (377)
T 3dwl_C 12 KPSYEHAFNSQR-----------TEFVTTT-----ATNQVELYEQDG--------------------------------- 42 (377)
T ss_dssp SCCSCCEECSSS-----------SEEECCC-----SSSCBCEEEEET---------------------------------
T ss_pred CcEEEEEECCCC-----------CEEEEec-----CCCEEEEEEccC---------------------------------
Confidence 367788888875 3777776 467899999841
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
..+.....+.+|.+.|++++|+|++ .+|++++.||.|+|||+.... ...+...+.
T Consensus 43 ------~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~------------------~~~~~~~~~ 97 (377)
T 3dwl_C 43 ------NGWKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDG------------------TWKQTLVLL 97 (377)
T ss_dssp ------TEEEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------------------------CCCCEEECC
T ss_pred ------CceEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCC------------------ceeeeeEec
Confidence 0113445566899999999999998 789999999999999998721 024677888
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeCCCcEEEEE
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (359)
+|...+.+++|+|++. +|++|+.|+.|++||++....+. ....+.+ |...|.+++|+|++. +|++++.|+.|++||
T Consensus 98 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 98 RLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWW-VSKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLS 174 (377)
T ss_dssp CCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CC-CCEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEE
T ss_pred ccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccce-eeeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEE
Confidence 9999999999999998 99999999999999998743211 1245666 999999999999998 999999999999999
Q ss_pred CCCC-----------------CCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 306 TRVG-----------------KSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 306 ~r~~-----------------~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++.. ..++..+ .|...|++++|+|++.+|+.+.. ++.|++|+..++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~----d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 175 AYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH----DSSVTIAYPSAPE 238 (377)
T ss_dssp ECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET----TTEEC-CEECSTT
T ss_pred EEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC----CCcEEEEECCCCC
Confidence 8632 1234444 89999999999999999998876 8999999998775
No 31
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=3e-25 Score=202.99 Aligned_cols=209 Identities=20% Similarity=0.279 Sum_probs=166.0
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|-|+. .+|+.|+ .++.|+||++..
T Consensus 14 ~~V~~v~~s~~g-----------~~lasgs-----~D~~v~lwd~~~--------------------------------- 44 (316)
T 3bg1_A 14 DMIHDAQMDYYG-----------TRLATCS-----SDRSVKIFDVRN--------------------------------- 44 (316)
T ss_dssp CCEEEEEECGGG-----------CEEEEEE-----TTTEEEEEEEET---------------------------------
T ss_pred CeEEEeeEcCCC-----------CEEEEEe-----CCCeEEEEEecC---------------------------------
Confidence 356778888875 4788887 577999999841
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCC-CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
....+...+.+|.+.|++++|+|. ...+|||++.||+|+|||+... ...+...+
T Consensus 45 ------~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~-------------------~~~~~~~~ 99 (316)
T 3bg1_A 45 ------GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG-------------------TWEKSHEH 99 (316)
T ss_dssp ------TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS-------------------CCCEEEEE
T ss_pred ------CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC-------------------cceEEEEc
Confidence 022344677899999999999863 2379999999999999999761 12456678
Q ss_pred cCCCCceEEEEeCCC--CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCC---------------
Q 018235 226 GGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE--------------- 288 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~--------------- 288 (359)
.+|...|.+++|+|+ +. +|++|+.|++|++|+++....+.. ...+.+|...|.+++|+|+.
T Consensus 100 ~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 100 AGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEV-KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp CCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEE-CCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred cCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcce-eeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 899999999999998 55 899999999999999987433321 25577899999999999973
Q ss_pred -CCEEEEEeCCCcEEEEECCCCC--CceEEeecCCCCEEEEEEcCCC----CeEEEEeeecccceEEEEEeCcC
Q 018235 289 -PDVFASCSVDGHIAIWDTRVGK--SALTSFKAHNADVNVISWNRCW----LAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 289 -~~~las~s~Dg~I~iwD~r~~~--~~~~~~~~h~~~V~~i~~s~~~----~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
..+|++|+.|++|+|||++... .++..+.+|...|++++|+|++ .+|+.+.. |+.|++|+...
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~----D~~v~iw~~~~ 247 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ----DGRVFIWTCDD 247 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET----TCEEEEEECSS
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC----CCeEEEEEccC
Confidence 1389999999999999997542 2455678999999999999986 67777665 99999999865
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.6e-25 Score=201.97 Aligned_cols=213 Identities=13% Similarity=0.162 Sum_probs=159.6
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|+ .++.|.||++.... .
T Consensus 58 ~~~v~~v~~sp~~-----------~~las~s-----~D~~v~iw~~~~~~---~-------------------------- 92 (330)
T 2hes_X 58 KKAIRSVAWRPHT-----------SLLAAGS-----FDSTVSIWAKEESA---D-------------------------- 92 (330)
T ss_dssp CSCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEEC----------------------------------
T ss_pred cCCEEEEEECCCC-----------CEEEEEe-----CCCcEEEEEcccCc---C--------------------------
Confidence 3467788898874 3677777 46789999873100 0
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
. .....+...+.+|.+.|++++|+|++ .+||+++.||+|+|||+..... ...++..+
T Consensus 93 -~----~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~-----------------~~~~~~~~ 149 (330)
T 2hes_X 93 -R----TFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGE-----------------EYECISVL 149 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCC-----------------CCEEEEEE
T ss_pred -c----cccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCC-----------------CeEEEEEe
Confidence 0 01234456677999999999999998 8999999999999999954100 12456788
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCC-cceecCccccCCCCCeEEEEecCC--CCCEEEEEeCCCcEE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA-TWNVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVDGHIA 302 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~-~~~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~Dg~I~ 302 (359)
.+|...|.+++|+|++. +|+||+.|++|++||.+... ..+ ..+.+|...|.+++|+|+ +. +|++|+.|++|+
T Consensus 150 ~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~ 224 (330)
T 2hes_X 150 QEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECV---AVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVR 224 (330)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEE---EEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEE
T ss_pred ccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEE---EEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEE
Confidence 99999999999999998 99999999999999987631 222 568899999999999998 44 899999999999
Q ss_pred EEECCCCC-------CceEEeec-CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 303 IWDTRVGK-------SALTSFKA-HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 303 iwD~r~~~-------~~~~~~~~-h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
|||++... .+...+.. |...|++++|++.+ +++.+.. |+.|++|+...+
T Consensus 225 iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~----dg~v~iw~~~~~ 281 (330)
T 2hes_X 225 VWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGA----DGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEET----TSCEEEEEEETT
T ss_pred EEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeC----CCEEEEEEcCCC
Confidence 99997641 12233333 89999999999765 5665554 889999997765
No 33
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=8.2e-25 Score=202.57 Aligned_cols=209 Identities=14% Similarity=0.229 Sum_probs=167.1
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|. .++.|.||++..
T Consensus 61 ~~~v~~~~~sp~g-----------~~l~s~s-----~D~~v~iw~~~~-------------------------------- 92 (345)
T 3fm0_A 61 QRTVRKVAWSPCG-----------NYLASAS-----FDATTCIWKKNQ-------------------------------- 92 (345)
T ss_dssp SSCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEEECC--------------------------------
T ss_pred CCcEEEEEECCCC-----------CEEEEEE-----CCCcEEEEEccC--------------------------------
Confidence 3467788888875 4777777 467899998730
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
........+.+|.+.|++++|+|++ .+||+++.||.|++||+.... ....+..+
T Consensus 93 -------~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~------------------~~~~~~~~ 146 (345)
T 3fm0_A 93 -------DDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEED------------------EYECVSVL 146 (345)
T ss_dssp -------C-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTS------------------CEEEEEEE
T ss_pred -------CCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCC------------------CeEEEEEe
Confidence 1223446778999999999999998 899999999999999997621 12345678
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (359)
.+|...|.+++|+|++. +|++|+.|++|++|+.+. +.+. ....+.+|...|.+++|+|++. +|++|+.|++|+|||
T Consensus 147 ~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~-~~~~-~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEE-DDWV-CCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWR 222 (345)
T ss_dssp CCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEET-TEEE-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred cCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecC-CCEE-EEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEec
Confidence 89999999999999998 999999999999999976 3322 1256789999999999999998 999999999999999
Q ss_pred CCCCC--------------CceEEee-cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 306 TRVGK--------------SALTSFK-AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 306 ~r~~~--------------~~~~~~~-~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
.+... .++..+. .|...|++++|+|++..++.+.. ++.+++|+...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~----d~~i~vw~~~~~ 284 (345)
T 3fm0_A 223 QYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG----DDAIRVFQEDPN 284 (345)
T ss_dssp EECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET----TSCEEEEEECTT
T ss_pred cccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC----CCeEEEEEeCCC
Confidence 75431 1223343 38889999999999999988876 889999986543
No 34
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=4.5e-25 Score=202.07 Aligned_cols=176 Identities=16% Similarity=0.219 Sum_probs=149.5
Q ss_pred CCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceE
Q 018235 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (359)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (359)
.-.+..++.+|.+.|++++|+|.++.+|+|++.||+|++|++...... ...++..+.+|...|.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~----------------~~~~~~~~~~h~~~v~ 69 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK----------------FGVPVRSFKGHSHIVQ 69 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE----------------EEEEEEEEECCSSCEE
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc----------------ccccceEEeCCcccEE
Confidence 344557888999999999999987789999999999999998652111 1345778999999999
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
+++|+|++. +|+||+.|++|++||+.+ +... ..+.+|...|.+++|+|++. +|++|+.|++|+|||++. .++
T Consensus 70 ~~~~s~dg~-~l~s~s~D~~v~~wd~~~-~~~~---~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~--~~~ 141 (319)
T 3frx_A 70 DCTLTADGA-YALSASWDKTLRLWDVAT-GETY---QRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG--QCL 141 (319)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTT-TEEE---EEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS--CEE
T ss_pred EEEECCCCC-EEEEEeCCCEEEEEECCC-CCee---EEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC--CeE
Confidence 999999998 999999999999999987 4444 67889999999999999998 999999999999999985 577
Q ss_pred EEeecCCCCEEEEEEcCCCC------eEEEEeeecccceEEEEEeCcCCc
Q 018235 314 TSFKAHNADVNVISWNRCWL------AVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~------~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+.+|...|.++.|+|... .++.+.. ++.|++|+.+.+.
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----d~~i~~wd~~~~~ 187 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN----DKMVKAWNLNQFQ 187 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEET----TSCEEEEETTTTE
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEeC----CCEEEEEECCcch
Confidence 78889999999999999643 5666654 8999999987654
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=3.6e-24 Score=201.80 Aligned_cols=202 Identities=13% Similarity=0.201 Sum_probs=160.7
Q ss_pred ceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 018235 69 CLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDE 148 (359)
Q Consensus 69 ~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~ 148 (359)
..++.|.|+. .+|++|. .++.|.||++.
T Consensus 126 v~~v~~s~dg-----------~~l~s~~-----~d~~i~iwd~~------------------------------------ 153 (393)
T 1erj_A 126 IRSVCFSPDG-----------KFLATGA-----EDRLIRIWDIE------------------------------------ 153 (393)
T ss_dssp EEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT------------------------------------
T ss_pred EEEEEECCCC-----------CEEEEEc-----CCCeEEEEECC------------------------------------
Confidence 4577777774 4677776 46789999872
Q ss_pred CCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCC
Q 018235 149 EGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH 228 (359)
Q Consensus 149 ~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 228 (359)
.......+.+|.+.|++++|+|++ .++++++.||+|++||+.. ......+. +
T Consensus 154 -----~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~---------------------~~~~~~~~-~ 205 (393)
T 1erj_A 154 -----NRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRT---------------------GQCSLTLS-I 205 (393)
T ss_dssp -----TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEE-C
T ss_pred -----CCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCC---------------------CeeEEEEE-c
Confidence 334556778999999999999999 7899999999999999987 34444554 4
Q ss_pred CCceEEEEeCC-CCCCeEEEEcCCCcEEEEecCCCCcceec----CccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 229 KDEGYAIDWNP-ITTGRLVTGDCNSCIYLWEPASDATWNVD----PNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 229 ~~~v~~l~~sp-~~~~~l~sgs~dg~I~lwd~~~~~~~~~~----~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
...+.+++|+| ++. +|++|+.||.|++||+++ +..... .....+|...|.+++|+|++. +|++|+.|++|+|
T Consensus 206 ~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~ 282 (393)
T 1erj_A 206 EDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKL 282 (393)
T ss_dssp SSCEEEEEECSTTCC-EEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEE
T ss_pred CCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEE
Confidence 56799999999 666 999999999999999987 333210 012267999999999999998 9999999999999
Q ss_pred EECCCCC-----------CceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 304 WDTRVGK-----------SALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 304 wD~r~~~-----------~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
||++... .+...+.+|...|.+++|+|++.+|+.+.. |+.|++||..++.
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~----D~~v~iwd~~~~~ 343 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK----DRGVLFWDKKSGN 343 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET----TSEEEEEETTTCC
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC----CCeEEEEECCCCe
Confidence 9998641 234566889999999999999999988776 8999999988765
No 36
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=2.9e-24 Score=204.86 Aligned_cols=227 Identities=17% Similarity=0.216 Sum_probs=172.4
Q ss_pred cccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 64 HIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDED 143 (359)
Q Consensus 64 ~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d 143 (359)
...-+...+.|.|+. ..+|++|+ .++.|.||++........
T Consensus 126 ~h~~~v~~l~~~p~~----------~~~lat~~-----~dg~V~vwd~~~~~~~~~------------------------ 166 (430)
T 2xyi_A 126 NHEGEVNRARYMPQN----------ACVIATKT-----PSSDVLVFDYTKHPSKPE------------------------ 166 (430)
T ss_dssp EESSCCSEEEEETTE----------EEEEEEEC-----SSSCEEEEEGGGSCSSCC------------------------
T ss_pred cCCCcEEEEEECCCC----------CcEEEEEC-----CCCcEEEEECCCcccccC------------------------
Confidence 334566677788752 25677776 356899999853110000
Q ss_pred CCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcE
Q 018235 144 SDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (359)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (359)
.. ........+.+|.+.|++++|+|.+..+|++++.||.|++|++........ ...+..
T Consensus 167 ----~~---~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------~~~~~~ 225 (430)
T 2xyi_A 167 ----PS---GECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR--------------VIDAKN 225 (430)
T ss_dssp ----TT---CCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG--------------EEECSE
T ss_pred ----cc---ccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc--------------eeccce
Confidence 00 012223566699999999999999955999999999999999987211000 023456
Q ss_pred EecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 224 ~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
.+.+|...|.+++|+|.+..+|++|+.||.|++||++.... ......+..|...|++++|+|++..+|++|+.||.|+|
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~v 304 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 304 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEE
Confidence 78899999999999996655999999999999999987431 11125567899999999999999889999999999999
Q ss_pred EECCCCCCceEEeecCCCCEEEEEEcCCCCe-EEEEeeecccceEEEEEeCcC
Q 018235 304 WDTRVGKSALTSFKAHNADVNVISWNRCWLA-VCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~-l~~~~~~~~~d~~i~iwd~~~ 355 (359)
||++....++..+..|...|++++|+|++.. ++.+.. ++.|++|+.+.
T Consensus 305 wd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~----d~~i~iwd~~~ 353 (430)
T 2xyi_A 305 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT----DRRLHVWDLSK 353 (430)
T ss_dssp EETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET----TSCCEEEEGGG
T ss_pred EeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC----CCcEEEEeCCC
Confidence 9999865778888999999999999999975 444444 88999999876
No 37
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=1.7e-24 Score=196.20 Aligned_cols=171 Identities=18% Similarity=0.328 Sum_probs=142.6
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
..+.+|.+.|++++|+|++ .+|||++.||+|+|||+... ..+++.++.+|...|++++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~-------------------~~~~~~~l~gH~~~V~~v~~s 62 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGE-------------------THKLIDTLTGHEGPVWRVDWA 62 (297)
T ss_dssp EECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSS-------------------CBCCCEEECCCSSCEEEEEEC
T ss_pred eeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCC-------------------CcEEEEEEccccCCeEEEEec
Confidence 3456899999999999999 89999999999999999751 135678999999999999998
Q ss_pred CC--CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC--CCCEEEEEeCCCcEEEEECCCCCC-ce
Q 018235 239 PI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVDGHIAIWDTRVGKS-AL 313 (359)
Q Consensus 239 p~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~Dg~I~iwD~r~~~~-~~ 313 (359)
+. +. +|+||+.||+|++||++.+ .+. ....+.+|...|.+++|+|+ +. +|++|+.|+.|+|||++.... ..
T Consensus 63 ~~~~g~-~l~s~s~D~~v~iWd~~~~-~~~-~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 63 HPKFGT-ILASCSYDGKVMIWKEENG-RWS-QIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp CGGGCS-EEEEEETTTEEEEEEBSSS-CBC-CCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCC
T ss_pred CCCcCC-EEEEEcCCCEEEEEEcCCC-ceE-EEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceee
Confidence 74 55 9999999999999999863 221 12456789999999999997 66 999999999999999987622 24
Q ss_pred EEeecCCCCEEEEEEcCC-------------CCeEEEEeeecccceEEEEEeCcCCc
Q 018235 314 TSFKAHNADVNVISWNRC-------------WLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~-------------~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+.+|...|++++|+|+ +.+|+.+.. |+.|++|+.+.+.
T Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~----D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDA 191 (297)
T ss_dssp EEEECCSSCEEEEEECCCC------------CCEEEEEET----TSCEEEEEEETTT
T ss_pred eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC----CCcEEEEEEcCCC
Confidence 567899999999999997 457777665 8999999987653
No 38
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=3.9e-24 Score=201.52 Aligned_cols=160 Identities=16% Similarity=0.331 Sum_probs=136.5
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
.+...|++++|+|++ .+||+++.||.|+|||+.. .+.+..+.+|...|++++|+|++.
T Consensus 121 ~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~---------------------~~~~~~~~~h~~~v~~~~~~p~~~ 178 (393)
T 1erj_A 121 SSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIEN---------------------RKIVMILQGHEQDIYSLDYFPSGD 178 (393)
T ss_dssp CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCC---------------------CcEEEEEccCCCCEEEEEEcCCCC
Confidence 455679999999999 8999999999999999987 566788999999999999999998
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC-CCCCEEEEEeCCCcEEEEECCCCCCceEEe-----
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSF----- 316 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~----- 316 (359)
+|++|+.|++|++||+++ +... ..+ .+...|.+++|+| ++. +|++|+.||.|+|||++++ ..+..+
T Consensus 179 -~l~s~s~d~~v~iwd~~~-~~~~---~~~-~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~-~~~~~~~~~~~ 250 (393)
T 1erj_A 179 -KLVSGSGDRTVRIWDLRT-GQCS---LTL-SIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETG-FLVERLDSENE 250 (393)
T ss_dssp -EEEEEETTSEEEEEETTT-TEEE---EEE-ECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTC-CEEEEEC----
T ss_pred -EEEEecCCCcEEEEECCC-CeeE---EEE-EcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCC-cEEEeeccccc
Confidence 999999999999999987 4433 223 3667899999999 555 9999999999999999987 555554
Q ss_pred --ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 317 --KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 317 --~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
.+|...|++++|+|++.+++.+.. |+.|++|+.+.+
T Consensus 251 ~~~~h~~~v~~v~~~~~g~~l~s~s~----d~~v~~wd~~~~ 288 (393)
T 1erj_A 251 SGTGHKDSVYSVVFTRDGQSVVSGSL----DRSVKLWNLQNA 288 (393)
T ss_dssp --CCCSSCEEEEEECTTSSEEEEEET----TSEEEEEEC---
T ss_pred CCCCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEECCCC
Confidence 578999999999999999988876 899999998753
No 39
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=5.7e-25 Score=205.44 Aligned_cols=166 Identities=12% Similarity=0.020 Sum_probs=135.1
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
+.|.+.|++++|+|++ .++++++.+ .+.+|+.... .........+|...+.+++|+|++
T Consensus 173 ~~~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~-------------------~~~~~~~~~~~~~~v~~v~fspdg 231 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTG-------------------SCIARKTDFDKNWSLSKINFIADD 231 (365)
T ss_dssp EECSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTC-------------------CEEEEECCCCTTEEEEEEEEEETT
T ss_pred eCCCCceEEEEEccCC-ceEEeccce-eEEEEEeccC-------------------cceeeeecCCCCCCEEEEEEcCCC
Confidence 4688999999999999 788998855 4566665541 011123455788899999999999
Q ss_pred CCeEEEEcCCC----cEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe-
Q 018235 242 TGRLVTGDCNS----CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF- 316 (359)
Q Consensus 242 ~~~l~sgs~dg----~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~- 316 (359)
. +|++++.++ .+++|++............+.+|...|++++|+|++. +||+|+.|++|+|||++++ +++..+
T Consensus 232 ~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~-~~~~~~~ 308 (365)
T 4h5i_A 232 T-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDL-SMSKIFK 308 (365)
T ss_dssp E-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTT-EEEEEET
T ss_pred C-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCC-cEEEEec
Confidence 8 999998887 6888998763332222356778999999999999999 9999999999999999997 777775
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 317 KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 317 ~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
.+|...|++|+|+|+|++|+.+.. |++|+||++..
T Consensus 309 ~gH~~~V~~v~fSpdg~~laS~S~----D~tvrvw~ip~ 343 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTYVASVSA----ANTIHIIKLPL 343 (365)
T ss_dssp TSSSSCEEEEEECTTSCEEEEEET----TSEEEEEECCT
T ss_pred CcccCCEEEEEECCCCCEEEEEeC----CCeEEEEEcCC
Confidence 789999999999999999998876 99999999854
No 40
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=1.9e-24 Score=212.64 Aligned_cols=160 Identities=19% Similarity=0.327 Sum_probs=143.3
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (359)
+...+.+|.+.|++++|+|++ .++++++.|+.|++||+.. +.+..+.+|...+.+++
T Consensus 418 ~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~----------------------~~~~~~~~~~~~v~~~~ 474 (577)
T 2ymu_A 418 LLQTLTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRNG----------------------QLLQTLTGHSSSVRGVA 474 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTS----------------------CEEEEEECCSSCEEEEE
T ss_pred EEEEecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECCC----------------------CEEEEEcCCCCCEEEEE
Confidence 446677999999999999999 7999999999999999754 56678899999999999
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
|+|++. +|++|+.|++|++|+.. ++.. ..+.+|...|++|+|+|++. +||+++.||.|+|||.. + .++..+
T Consensus 475 ~spd~~-~las~~~d~~i~iw~~~--~~~~---~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~-~-~~~~~~ 545 (577)
T 2ymu_A 475 FSPDGQ-TIASASDDKTVKLWNRN--GQLL---QTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN-G-QLLQTL 545 (577)
T ss_dssp ECTTSC-EEEEEETTSEEEEEETT--SCEE---EEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT-S-CEEEEE
T ss_pred EcCCCC-EEEEEeCCCEEEEEcCC--CCEE---EEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCC-C-CEEEEE
Confidence 999998 99999999999999963 4444 67889999999999999999 99999999999999964 4 678888
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEe
Q 018235 317 KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILD 352 (359)
Q Consensus 317 ~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd 352 (359)
.+|...|++++|+|++++|+.+.. |+.|++||
T Consensus 546 ~~h~~~v~~~~fs~dg~~l~s~~~----D~~i~~Wd 577 (577)
T 2ymu_A 546 TGHSSSVWGVAFSPDGQTIASASS----DKTVKLWN 577 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEET----TSCEEEEC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeC----CCEEEEeC
Confidence 999999999999999999988765 89999997
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=2.9e-24 Score=213.98 Aligned_cols=166 Identities=21% Similarity=0.228 Sum_probs=143.6
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 239 (359)
.+.+|.+.|++++|+|+++.++++++.|++|++||... .+.+.++.+|...|++++|+|
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---------------------~~~~~~l~~H~~~V~~v~fsp 200 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP---------------------FKFKSTFGEHTKFVHSVRYNP 200 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT---------------------BEEEEEECCCSSCEEEEEECT
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC---------------------CeEeeeeccccCceEEEEECC
Confidence 35689999999999999867899999999999999765 456778999999999999999
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCcceecCccc-------cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCc
Q 018235 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF-------IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312 (359)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~-------~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~ 312 (359)
++. +|+||+.|++|++||+.+ +... ..+ .+|...|.+++|+|++. +|++|+.|++|+|||++++ .+
T Consensus 201 dg~-~las~s~D~~i~lwd~~~-g~~~---~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~-~~ 273 (611)
T 1nr0_A 201 DGS-LFASTGGDGTIVLYNGVD-GTKT---GVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATL-KV 273 (611)
T ss_dssp TSS-EEEEEETTSCEEEEETTT-CCEE---EECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT-EE
T ss_pred CCC-EEEEEECCCcEEEEECCC-CcEe---eeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCC-ce
Confidence 998 999999999999999977 3333 223 27999999999999999 9999999999999999875 32
Q ss_pred e-------------------------------------------EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEE
Q 018235 313 L-------------------------------------------TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFM 349 (359)
Q Consensus 313 ~-------------------------------------------~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~ 349 (359)
+ ..+.+|...|++++|+|++.+|+.+.. |+.|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~----D~~v~ 349 (611)
T 1nr0_A 274 EKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA----EGHIN 349 (611)
T ss_dssp EEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEE
T ss_pred eeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC----CCcEE
Confidence 2 233579999999999999999998876 89999
Q ss_pred EEeCcCCc
Q 018235 350 ILDCSRGE 357 (359)
Q Consensus 350 iwd~~~g~ 357 (359)
+|+..++.
T Consensus 350 ~Wd~~~~~ 357 (611)
T 1nr0_A 350 SWDISTGI 357 (611)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 99988764
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=9.8e-24 Score=195.55 Aligned_cols=210 Identities=14% Similarity=0.193 Sum_probs=169.3
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
+-|..++.|.|+. .+|++|+ .++.|.||++..
T Consensus 8 ~~~i~~~~~s~~~-----------~~l~~~~-----~d~~v~i~~~~~-------------------------------- 39 (372)
T 1k8k_C 8 VEPISCHAWNKDR-----------TQIAICP-----NNHEVHIYEKSG-------------------------------- 39 (372)
T ss_dssp SSCCCEEEECTTS-----------SEEEEEC-----SSSEEEEEEEET--------------------------------
T ss_pred CCCeEEEEECCCC-----------CEEEEEe-----CCCEEEEEeCCC--------------------------------
Confidence 3467788888885 4677776 367999999841
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
........+.+|.+.|++++|+|++ .++++++.||.|++||+... ...+...+
T Consensus 40 -------~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~-------------------~~~~~~~~ 92 (372)
T 1k8k_C 40 -------NKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGR-------------------TWKPTLVI 92 (372)
T ss_dssp -------TEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETT-------------------EEEEEEEC
T ss_pred -------CcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCC-------------------eeeeeEEe
Confidence 0212446667899999999999988 89999999999999999761 01233455
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (359)
..|...+.+++|+|++. +|++|+.||.|++||++....+........+|...|.+++|+|++. +|++++.||.|++||
T Consensus 93 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFS 170 (372)
T ss_dssp CCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred ecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEE
Confidence 77889999999999998 9999999999999999874432211233467899999999999998 999999999999999
Q ss_pred CC------------------CCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 306 TR------------------VGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 306 ~r------------------~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++ .+ .++..+..|...|++++|+|++.+++++.. ++.|++|+.+++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 171 AYIKEVEERPAPTPWGSKMPFG-ELMFESSSSCGWVHGVCFSANGSRVAWVSH----DSTVCLADADKKM 235 (372)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTT-CEEEECCCCSSCEEEEEECSSSSEEEEEET----TTEEEEEEGGGTT
T ss_pred cccccccccccccccccccchh-hheEecCCCCCeEEEEEECCCCCEEEEEeC----CCEEEEEECCCCc
Confidence 75 33 566777889999999999999999988876 8999999998765
No 43
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=3.1e-24 Score=202.35 Aligned_cols=176 Identities=16% Similarity=0.286 Sum_probs=147.0
Q ss_pred EEecCCCceeeEEEeC-CCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 160 RKVAHQGCVNRIRAMT-QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p-~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
.+.+|.+.|++++|+| ++ .+||+++.||.|+||++....... ....++..+.+|...|.+++|+
T Consensus 76 ~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~--------------~~~~~~~~~~~h~~~v~~~~~~ 140 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVL--------------PLREPVITLEGHTKRVGIVAWH 140 (402)
T ss_dssp CBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSS--------------CBCSCSEEEECCSSCEEEEEEC
T ss_pred eEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCcc--------------ccCCceEEecCCCCeEEEEEEC
Confidence 3458999999999999 55 899999999999999998721000 0126788999999999999999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCcceecCccc--cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF--IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~--~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
|++..+|++|+.||.|++||+++ +... ..+ .+|...|.+++|+|++. +|++++.||.|+|||++++ ..+..+
T Consensus 141 p~~~~~l~s~~~dg~i~iwd~~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~-~~~~~~ 214 (402)
T 2aq5_A 141 PTAQNVLLSAGCDNVILVWDVGT-GAAV---LTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKG-TVVAEK 214 (402)
T ss_dssp SSBTTEEEEEETTSCEEEEETTT-TEEE---EEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTT-EEEEEE
T ss_pred cCCCCEEEEEcCCCEEEEEECCC-CCcc---EEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCC-ceeeee
Confidence 99855999999999999999987 4444 456 78999999999999998 9999999999999999997 677777
Q ss_pred -ecCCCC-EEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 317 -KAHNAD-VNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 317 -~~h~~~-V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..|... +.++.|+|++.+++.+.. ...++.|++||.+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLE 256 (402)
T ss_dssp ECSSCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEEEETTBCS
T ss_pred ccCCCCCcceEEEEcCCCcEEEEecc-CCCCceEEEEcCcccc
Confidence 688776 899999999998888731 1238999999998754
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6e-24 Score=197.11 Aligned_cols=208 Identities=17% Similarity=0.221 Sum_probs=169.3
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|++|+ .++.|.||++..
T Consensus 11 ~~~v~~~~~s~~~-----------~~l~~~~-----~dg~i~iw~~~~-------------------------------- 42 (379)
T 3jrp_A 11 NELIHDAVLDYYG-----------KRLATCS-----SDKTIKIFEVEG-------------------------------- 42 (379)
T ss_dssp CCCEEEEEECSSS-----------SEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred cccEEEEEEcCCC-----------CEEEEEE-----CCCcEEEEecCC--------------------------------
Confidence 3466788888875 4777787 467899999841
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCC--CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcE
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (359)
........+.+|.+.|++++|++. + .+|++++.||.|++||+... ....+.
T Consensus 43 -------~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~-------------------~~~~~~ 95 (379)
T 3jrp_A 43 -------ETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENG-------------------RWSQIA 95 (379)
T ss_dssp -------TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETT-------------------EEEEEE
T ss_pred -------CcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCC-------------------ceeEee
Confidence 133455677789999999999876 5 89999999999999999871 112667
Q ss_pred EecCCCCceEEEEeCCC--CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC-------------C
Q 018235 224 KFGGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT-------------E 288 (359)
Q Consensus 224 ~~~~h~~~v~~l~~sp~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-------------~ 288 (359)
.+.+|...+.+++|+|+ +. +|++|+.||.|++||++...... ...+.+|...|.+++|+|. +
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 172 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCC--EEEEECCTTCEEEEEECCCC----------CTT
T ss_pred eecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCcee--eEEecCCCCceEEEEEcCccccccccccCCCCC
Confidence 88889999999999999 76 99999999999999998743322 2456789999999999994 6
Q ss_pred CCEEEEEeCCCcEEEEECCCCCC---ceEEeecCCCCEEEEEEcCC---CCeEEEEeeecccceEEEEEeCcCC
Q 018235 289 PDVFASCSVDGHIAIWDTRVGKS---ALTSFKAHNADVNVISWNRC---WLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 289 ~~~las~s~Dg~I~iwD~r~~~~---~~~~~~~h~~~V~~i~~s~~---~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
. +|++|+.||.|+|||++.... .+..+.+|...|++++|+|+ +.+++.+.. ++.|++|+...+
T Consensus 173 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~----dg~i~iwd~~~~ 241 (379)
T 3jrp_A 173 R-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ----DRTCIIWTQDNE 241 (379)
T ss_dssp C-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET----TSCEEEEEESST
T ss_pred C-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC----CCEEEEEeCCCC
Confidence 6 999999999999999997632 33456789999999999999 788887766 889999998876
No 45
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=2e-23 Score=192.92 Aligned_cols=199 Identities=16% Similarity=0.208 Sum_probs=157.3
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|+. .+++.|. .++.|.||++.
T Consensus 77 ~~V~~~~~~~~~-----------~~l~s~s-----~D~~v~lwd~~---------------------------------- 106 (343)
T 2xzm_R 77 HFVSDLALSQEN-----------CFAISSS-----WDKTLRLWDLR---------------------------------- 106 (343)
T ss_dssp SCEEEEEECSST-----------TEEEEEE-----TTSEEEEEETT----------------------------------
T ss_pred CceEEEEECCCC-----------CEEEEEc-----CCCcEEEEECC----------------------------------
Confidence 456677887774 3677776 47799999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE--
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK-- 224 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 224 (359)
.......+.+|.+.|++++|+|++ .+|++++.||+|++||+... ....
T Consensus 107 -------~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~----------------------~~~~~~ 156 (343)
T 2xzm_R 107 -------TGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGE----------------------CKFSSA 156 (343)
T ss_dssp -------SSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSC----------------------EEEECC
T ss_pred -------CCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCC----------------------ceeeee
Confidence 333456777999999999999999 78999999999999998741 1112
Q ss_pred -ecCCCCceEEEEeCCCCC---------CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEE
Q 018235 225 -FGGHKDEGYAIDWNPITT---------GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294 (359)
Q Consensus 225 -~~~h~~~v~~l~~sp~~~---------~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las 294 (359)
..+|...+.+++|+|.+. .+|++|+.||+|++||.+ .... ..+.+|...|.+++|+|++. +|++
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~---~~~~~h~~~v~~~~~s~~g~-~l~s 230 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIR---YTFKAHESNVNHLSISPNGK-YIAT 230 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEE---EEEECCSSCEEEEEECTTSS-EEEE
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--Ccee---EEEcCccccceEEEECCCCC-EEEE
Confidence 237888999999999872 289999999999999953 2332 56789999999999999999 9999
Q ss_pred EeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 295 ~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|+.||.|+|||++....+...+ .+...|++++|+|++.+++.+. ++.+++|+..++.
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~-----d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGT-----DQGVKIFNLMTQS 287 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEE-----SSCEEEEESSSCC
T ss_pred EcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEEC-----CCCEEEEEeCCCC
Confidence 9999999999996553444444 3556799999999998876553 5669999987654
No 46
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-24 Score=211.51 Aligned_cols=165 Identities=10% Similarity=0.125 Sum_probs=140.6
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE--Ee
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI--DW 237 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l--~~ 237 (359)
.+.+|.+.|++++|++.+ .||+|+.||+|++||+.. ...+...+.+|...|.+| .|
T Consensus 261 ~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~--------------------~~~~~~~~~~H~~~V~sv~~~~ 318 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTD--------------------PEVPSFYDQVHDSYILSVSTAY 318 (524)
T ss_dssp EECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTB--------------------CSSCSEEEECSSSCEEEEEEEC
T ss_pred EEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCC--------------------CCCceEEeecccccEEEEEEEc
Confidence 456899999999999854 799999999999999986 235667889999999999 57
Q ss_pred CCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCC--CeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA--SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 238 sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~--~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
+|++..+||||+.|++|+|||+++ .+.. ..+.+|.. .|.+|+|+|++. .|++++.|++|+|||++.+ .++..
T Consensus 319 s~~g~~~laS~S~D~tvklWD~~~-~~~~---~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~-~~~~~ 392 (524)
T 2j04_B 319 SDFEDTVVSTVAVDGYFYIFNPKD-IATT---KTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAA-FAVHP 392 (524)
T ss_dssp CTTSCCEEEEEETTSEEEEECGGG-HHHH---CEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCT-TCCEE
T ss_pred CCCCCeEEEEeccCCeEEEEECCC-CCcc---cccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccc-cccee
Confidence 888723999999999999999987 3333 34556653 588999999998 8999999999999999997 66778
Q ss_pred eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 316 FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 316 ~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
+.+|...|++|+|+|++++|+.+.. |+.|++|+...+
T Consensus 393 l~gH~~~V~sva~Sp~g~~l~Sgs~----Dgtv~lwd~~~~ 429 (524)
T 2j04_B 393 LVSRETTITAIGVSRLHPMVLAGSA----DGSLIITNAARR 429 (524)
T ss_dssp EEECSSCEEEEECCSSCCBCEEEET----TTEEECCBSCSS
T ss_pred eecCCCceEEEEeCCCCCeEEEEEC----CCEEEEEechHh
Confidence 8899999999999999999988776 999999997653
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.4e-24 Score=201.89 Aligned_cols=226 Identities=12% Similarity=0.220 Sum_probs=173.0
Q ss_pred hhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCC
Q 018235 59 SLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESS 138 (359)
Q Consensus 59 ~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~ 138 (359)
.+..+...-+..++.|.|+. .+|++|+ .++.|.||++....
T Consensus 60 ~~~~~~~~~~v~~~~~s~~~-----------~~l~~~~-----~dg~v~vw~~~~~~----------------------- 100 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDWSHNN-----------KIIAGAL-----DNGSLELYSTNEAN----------------------- 100 (416)
T ss_dssp CSCCCCCSSCEEEEEECSSS-----------SCEEEEE-----SSSCEEEECCSSTT-----------------------
T ss_pred EEEEEecCCceEEEEECCCC-----------CeEEEEc-----cCCeEEEeeccccc-----------------------
Confidence 34444556678899998875 4677777 36689999873100
Q ss_pred CCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCC
Q 018235 139 DSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSN 218 (359)
Q Consensus 139 ~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 218 (359)
........+.+|.+.|++++|+|++..++++++.||.|++||+.......... .
T Consensus 101 --------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------------~ 154 (416)
T 2pm9_A 101 --------------NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY------------T 154 (416)
T ss_dssp --------------SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC------------C
T ss_pred --------------ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc------------c
Confidence 02234567778999999999999844899999999999999998731000000 0
Q ss_pred CCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCC------CCCeEEEEecCCCCCEE
Q 018235 219 QSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGH------SASVEDLQWSPTEPDVF 292 (359)
Q Consensus 219 ~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h------~~~V~~v~~sp~~~~~l 292 (359)
......+.+|...+.+++|+|++..+|++|+.||.|++||++. +... ..+..| ...|.+++|+|++..+|
T Consensus 155 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 230 (416)
T 2pm9_A 155 PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA-KKEV---IHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230 (416)
T ss_dssp CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT-TEEE---EEECCCCCSSCCCCCEEEEEECSSCTTEE
T ss_pred ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC-CCcc---eEEeccccccccCCceEEEEECCCCCCEE
Confidence 0111234678899999999999544999999999999999987 4433 334333 78999999999987699
Q ss_pred EEEeCCC---cEEEEECCCCCCceEEee-cCCCCEEEEEEcC-CCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 293 ASCSVDG---HIAIWDTRVGKSALTSFK-AHNADVNVISWNR-CWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 293 as~s~Dg---~I~iwD~r~~~~~~~~~~-~h~~~V~~i~~s~-~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++++.|+ .|++||+++...++..+. +|...|++++|+| ++.+++.+.. ++.|++|+..+++
T Consensus 231 ~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~----dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 231 ATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR----DNTVLLWNPESAE 296 (416)
T ss_dssp EEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES----SSEEEEECSSSCC
T ss_pred EEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC----CCCEEEeeCCCCc
Confidence 9999999 999999998645667777 8999999999999 8888888876 8999999988765
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=1.8e-23 Score=197.54 Aligned_cols=169 Identities=13% Similarity=0.167 Sum_probs=140.7
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
.....+.+|.+.|++++|+|++ .+|++++.||.|++||+.. .+.+..+.+|...|+++
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~---------------------~~~~~~~~~h~~~v~~~ 187 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKD---------------------GSNPRTLIGHRATVTDI 187 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------CCCCEEEECCSSCEEEE
T ss_pred ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCC---------------------CcCceEEcCCCCcEEEE
Confidence 3434456899999999999998 7999999999999999987 56778899999999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCcccc---CCC---------------------CCeEEEEecCCCCCE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI---GHS---------------------ASVEDLQWSPTEPDV 291 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~---~h~---------------------~~V~~v~~sp~~~~~ 291 (359)
+|+|++. +|++|+.||+|++||+++ ++.. ..+. .|. ..+.+++|+|++. +
T Consensus 188 ~~~~~~~-~l~s~~~d~~v~iwd~~~-~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~ 261 (420)
T 3vl1_A 188 AIIDRGR-NVLSASLDGTIRLWECGT-GTTI---HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-Y 261 (420)
T ss_dssp EEETTTT-EEEEEETTSCEEEEETTT-TEEE---EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-E
T ss_pred EEcCCCC-EEEEEcCCCcEEEeECCC-Ccee---EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-E
Confidence 9999998 999999999999999987 4433 2232 233 4444555678888 9
Q ss_pred EEEEeCCCcEEEEECCCCCCceEEe-ecCCCCEEEEEEcCCCC-eEEEEeeecccceEEEEEeCcCCc
Q 018235 292 FASCSVDGHIAIWDTRVGKSALTSF-KAHNADVNVISWNRCWL-AVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 292 las~s~Dg~I~iwD~r~~~~~~~~~-~~h~~~V~~i~~s~~~~-~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|++|+.||.|+|||++++ ..+..+ ..|...|++++|+|++. +++.+.. ++.|++|+.+++.
T Consensus 262 l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~----dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSK-EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE----NGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEETTSCEEEEETTTC-CEEEEECCTTSSCEEEEEECSSCTTEEEEEET----TSEEEEEETTCTT
T ss_pred EEEEcCCCeEEEEECCCC-ceeEEcccccCCCceeEEEeCCCCCEEEEEeC----CCeEEEEEcCCCc
Confidence 999999999999999997 555555 56889999999999999 7777765 8999999998764
No 49
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=1.4e-23 Score=196.14 Aligned_cols=205 Identities=15% Similarity=0.093 Sum_probs=163.6
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|+.. .+|++|+ .++.|.||++..
T Consensus 74 ~~v~~~~~~~~~~----------~~l~s~~-----~dg~i~iwd~~~--------------------------------- 105 (383)
T 3ei3_B 74 RRVTSLEWHPTHP----------TTVAVGS-----KGGDIILWDYDV--------------------------------- 105 (383)
T ss_dssp SCEEEEEECSSCT----------TEEEEEE-----BTSCEEEEETTS---------------------------------
T ss_pred CCEEEEEECCCCC----------CEEEEEc-----CCCeEEEEeCCC---------------------------------
Confidence 4556777877631 3777777 366899998731
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
..........+|.+.|++++|+|.+..++++++.||.|++||+.. ..+..+.
T Consensus 106 ------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----------------------~~~~~~~ 157 (383)
T 3ei3_B 106 ------QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG----------------------SVIQVFA 157 (383)
T ss_dssp ------TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS----------------------CEEEEEE
T ss_pred ------cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC----------------------CceEEEe
Confidence 133333444579999999999995448999999999999999985 2233443
Q ss_pred C---CCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 227 G---HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 227 ~---h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
. |...+.+++|+|++. +|++|+.||.|++||++ +... ..+.+|...|.+++|+|++..+|++|+.|+.|+|
T Consensus 158 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~--~~~~---~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD--GHEI---FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT--SCEE---EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred ccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC--CCEE---EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 3 447899999999998 99999999999999994 3333 5678899999999999999889999999999999
Q ss_pred EECCCCC---CceEEeecCCCCEEEEEEcC-CCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 304 WDTRVGK---SALTSFKAHNADVNVISWNR-CWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 304 wD~r~~~---~~~~~~~~h~~~V~~i~~s~-~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
||+++.. ..+..+ .|...|++++|+| ++.+++++.. ++.|++|+.+++..
T Consensus 232 wd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~----d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ----RNEIRVYSSYDWSK 285 (383)
T ss_dssp EEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES----SSEEEEEETTBTTS
T ss_pred EeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC----CCcEEEEECCCCcc
Confidence 9999841 334444 7999999999999 9999988876 89999999987653
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=3e-24 Score=196.30 Aligned_cols=175 Identities=21% Similarity=0.341 Sum_probs=139.6
Q ss_pred EEEEEecCCCceeeEEEeCCC-CcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQN-PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~-~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
....+.+|.+.|++++|+|+. ..+||+++.||.|++||+.... .......+.+|...+.++
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~------------------~~~~~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG------------------QWEVKKINNAHTIGCNAV 156 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS------------------CEEECCBTTSSSSCBCCC
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC------------------CcceeeeeccccCCcceE
Confidence 335667899999999999983 2789999999999999997621 011234567899999999
Q ss_pred EeCCCC----------------CCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCC---CCEEEEEe
Q 018235 236 DWNPIT----------------TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE---PDVFASCS 296 (359)
Q Consensus 236 ~~sp~~----------------~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~---~~~las~s 296 (359)
+|+|.. ..+|++|+.|++|++||++....+. ....+.+|...|.+++|+|++ ..+||+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK-EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE-EEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred EEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc-eeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 999973 1289999999999999997533221 125688999999999999986 23999999
Q ss_pred CCCcEEEEECCCCC---CceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 297 VDGHIAIWDTRVGK---SALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 297 ~Dg~I~iwD~r~~~---~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.||+|+|||++... .....+..|...|++++|+|++.+|+.+.. |+.|++|+..
T Consensus 236 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~----D~~v~lw~~~ 292 (316)
T 3bg1_A 236 QDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG----DNKVTLWKES 292 (316)
T ss_dssp TTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES----SSCEEEEEEC
T ss_pred CCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC----CCeEEEEEEC
Confidence 99999999998631 123345678999999999999999998876 8999999965
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-23 Score=193.98 Aligned_cols=211 Identities=18% Similarity=0.259 Sum_probs=167.2
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+.. ..+|++|+ .++.|.||++..
T Consensus 55 ~~~v~~~~~~~~~~---------~~~l~s~~-----~dg~v~iwd~~~-------------------------------- 88 (379)
T 3jrp_A 55 EGPVWRVDWAHPKF---------GTILASCS-----YDGKVLIWKEEN-------------------------------- 88 (379)
T ss_dssp SSCEEEEEECCGGG---------CSEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred CCcEEEEEeCCCCC---------CCEEEEec-----cCCEEEEEEcCC--------------------------------
Confidence 45677888877621 14777777 467899999841
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCC--CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcE
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (359)
...........|.+.|++++|+|+ + .++++++.||.|++||+... ......
T Consensus 89 -------~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~-------------------~~~~~~ 141 (379)
T 3jrp_A 89 -------GRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKEN-------------------GTTSPI 141 (379)
T ss_dssp -------TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTT-------------------SCCCEE
T ss_pred -------CceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCC-------------------CceeeE
Confidence 022244666789999999999998 6 79999999999999999872 124456
Q ss_pred EecCCCCceEEEEeCC-------------CCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC---
Q 018235 224 KFGGHKDEGYAIDWNP-------------ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--- 287 (359)
Q Consensus 224 ~~~~h~~~v~~l~~sp-------------~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--- 287 (359)
.+.+|...+.+++|+| ++. +|++|+.||.|++||++...........+.+|...|.+++|+|+
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCC
Confidence 7789999999999999 466 99999999999999998744322223567889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCce-EE-e--ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 288 EPDVFASCSVDGHIAIWDTRVGKSAL-TS-F--KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 288 ~~~~las~s~Dg~I~iwD~r~~~~~~-~~-~--~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
+. +|++++.||.|+|||++.+.... .. + ..|...|++++|+|++.+|+.+.. ++.|++|+...
T Consensus 221 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----dg~i~iw~~~~ 287 (379)
T 3jrp_A 221 RS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG----DNKVTLWKENL 287 (379)
T ss_dssp SE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES----SSSEEEEEEEE
T ss_pred CC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC----CCcEEEEeCCC
Confidence 66 99999999999999999863221 12 2 348889999999999999998876 88899999773
No 52
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=3.9e-23 Score=193.57 Aligned_cols=162 Identities=17% Similarity=0.271 Sum_probs=142.2
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC---C---CCceEEE
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG---H---KDEGYAI 235 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h---~~~v~~l 235 (359)
..|...|++++|+|++ ++++++.+|.|++||+.. ..++..+.. | ...+.++
T Consensus 183 ~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~---------------------~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 183 MTPSQFATSVDISERG--LIATGFNNGTVQISELST---------------------LRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp SSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT---------------------TEEEEEEECCC---CCCCCEEEE
T ss_pred cCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC---------------------CceeEEEeccccccccCCccceE
Confidence 4589999999999988 899999999999999987 567778888 8 8999999
Q ss_pred EeCCCCCCeEEEEcCC---CcEEEEecCCCCcceecCccccC-------------CCCCeEEEEecCCCCCEEEEEeCCC
Q 018235 236 DWNPITTGRLVTGDCN---SCIYLWEPASDATWNVDPNPFIG-------------HSASVEDLQWSPTEPDVFASCSVDG 299 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~d---g~I~lwd~~~~~~~~~~~~~~~~-------------h~~~V~~v~~sp~~~~~las~s~Dg 299 (359)
+|+|++. +|++|+.| |.|++||+++ +... ..+.+ |...|.+++|+|++. +|++++.||
T Consensus 240 ~~~~~~~-~l~~~~~d~~~g~i~i~d~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg 313 (397)
T 1sq9_A 240 KFSPQGS-LLAIAHDSNSFGCITLYETEF-GERI---GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDG 313 (397)
T ss_dssp EECSSTT-EEEEEEEETTEEEEEEEETTT-CCEE---EEECBC--------CCBSBSSCEEEEEECSSSS-EEEEEETTS
T ss_pred EECCCCC-EEEEEecCCCCceEEEEECCC-Cccc---ceeccCcccccccccccccCCcEEEEEECCCCC-EEEEEeCCC
Confidence 9999998 99999999 9999999987 4443 45666 999999999999998 999999999
Q ss_pred cEEEEECCCCCCceEEee------cC---------------CCCEEEEEEcCCC----------CeEEEEeeecccceEE
Q 018235 300 HIAIWDTRVGKSALTSFK------AH---------------NADVNVISWNRCW----------LAVCWHLEVMMEHFLF 348 (359)
Q Consensus 300 ~I~iwD~r~~~~~~~~~~------~h---------------~~~V~~i~~s~~~----------~~l~~~~~~~~~d~~i 348 (359)
.|+|||++++ .++..+. .| ...|++++|+|++ .+|+.+.. ++.|
T Consensus 314 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~----dg~i 388 (397)
T 1sq9_A 314 KLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCL----DRSI 388 (397)
T ss_dssp EEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEET----TTEE
T ss_pred eEEEEEcCCC-ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecC----CCcE
Confidence 9999999997 7788888 78 9999999999998 67777766 8999
Q ss_pred EEEeCcCCc
Q 018235 349 MILDCSRGE 357 (359)
Q Consensus 349 ~iwd~~~g~ 357 (359)
++|+..+|.
T Consensus 389 ~iw~~~~g~ 397 (397)
T 1sq9_A 389 RWFREAGGK 397 (397)
T ss_dssp EEEEEEC--
T ss_pred EEEEcCCCC
Confidence 999998763
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7e-24 Score=199.69 Aligned_cols=168 Identities=15% Similarity=0.269 Sum_probs=144.8
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCC------CCceE
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH------KDEGY 233 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~ 233 (359)
....|.+.|++++|+|++..++++++.+|.|++||+.. ..++..+..| ...+.
T Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---------------------~~~~~~~~~~~~~~~~~~~v~ 218 (416)
T 2pm9_A 160 QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA---------------------KKEVIHLSYTSPNSGIKQQLS 218 (416)
T ss_dssp CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT---------------------TEEEEEECCCCCSSCCCCCEE
T ss_pred cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC---------------------CCcceEEeccccccccCCceE
Confidence 34579999999999999558999999999999999987 4455566555 78999
Q ss_pred EEEeCCCCCCeEEEEcCCC---cEEEEecCCCCcceecCcccc-CCCCCeEEEEecC-CCCCEEEEEeCCCcEEEEECCC
Q 018235 234 AIDWNPITTGRLVTGDCNS---CIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRV 308 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg---~I~lwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~ 308 (359)
+++|+|++..+|++|+.|+ .|++||++...... ..+. +|...|.+++|+| ++. +|++++.||.|+|||+++
T Consensus 219 ~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 219 VVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPL---QTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp EEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCS---BCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSS
T ss_pred EEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCc---EEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCC
Confidence 9999999865999999999 99999998743433 5677 8999999999999 666 999999999999999999
Q ss_pred CCCceEEeecCCCCEEEEEEcCCC-CeEEEEeeecccceEEEEEeCcCCc
Q 018235 309 GKSALTSFKAHNADVNVISWNRCW-LAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 309 ~~~~~~~~~~h~~~V~~i~~s~~~-~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+ .++..+..|...|++++|+|++ .+++.+.. ++.|++|+...+.
T Consensus 295 ~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~----d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 295 A-EQLSQFPARGNWCFKTKFAPEAPDLFACASF----DNKIEVQTLQNLT 339 (416)
T ss_dssp C-CEEEEEECSSSCCCCEEECTTCTTEEEECCS----SSEEEEEESCCCC
T ss_pred C-ccceeecCCCCceEEEEECCCCCCEEEEEec----CCcEEEEEccCCC
Confidence 7 7888899999999999999999 67776655 8999999988754
No 54
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=1.8e-23 Score=197.20 Aligned_cols=212 Identities=13% Similarity=0.133 Sum_probs=168.4
Q ss_pred cCcceeEEEEe-ccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVR-DTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (359)
Q Consensus 66 ~wP~ls~~~~p-d~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~ 144 (359)
.-+..++.|.| +. .+|++|+ .++.|.||++..-....
T Consensus 81 ~~~V~~~~~~p~~~-----------~~l~s~s-----~dg~v~vw~~~~~~~~~-------------------------- 118 (402)
T 2aq5_A 81 TAPVLDIAWCPHND-----------NVIASGS-----EDCTVMVWEIPDGGLVL-------------------------- 118 (402)
T ss_dssp SSCEEEEEECTTCT-----------TEEEEEE-----TTSEEEEEECCTTCCSS--------------------------
T ss_pred CCCEEEEEeCCCCC-----------CEEEEEe-----CCCeEEEEEccCCCCcc--------------------------
Confidence 55788999998 43 3777776 46789999984110000
Q ss_pred CcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE
Q 018235 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
........+.+|.+.|++++|+|++.+++++++.||.|+|||+.. ..++..
T Consensus 119 --------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~---------------------~~~~~~ 169 (402)
T 2aq5_A 119 --------PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT---------------------GAAVLT 169 (402)
T ss_dssp --------CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT---------------------TEEEEE
T ss_pred --------ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC---------------------CCccEE
Confidence 001122456689999999999999877999999999999999987 566777
Q ss_pred e--cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccc-cCCCCC-eEEEEecCCCCCEEEEE---eC
Q 018235 225 F--GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF-IGHSAS-VEDLQWSPTEPDVFASC---SV 297 (359)
Q Consensus 225 ~--~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~-V~~v~~sp~~~~~las~---s~ 297 (359)
+ .+|...+.+++|+|++. +|++|+.||.|++||+++ +... ..+ .+|... +.++.|+|++. +|++| +.
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~ 243 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRK-GTVV---AEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMS 243 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTT-TEEE---EEEECSSCSSSCCEEEECSTTE-EEEEEECTTC
T ss_pred EecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCC-Ccee---eeeccCCCCCcceEEEEcCCCc-EEEEeccCCC
Confidence 8 78999999999999998 999999999999999987 4443 445 678765 89999999988 88888 79
Q ss_pred CCcEEEEECCCCCCceEEe-ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 298 DGHIAIWDTRVGKSALTSF-KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~-~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|+.|+|||++....++... ..|...|.+++|+|++.+++.... .++.|++|+...+.
T Consensus 244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~---~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK---GDSSIRYFEITSEA 301 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEET---TCSCEEEEEECSST
T ss_pred CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEc---CCCeEEEEEecCCC
Confidence 9999999999874444444 357788999999999999876543 27889999988765
No 55
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=6.3e-23 Score=193.51 Aligned_cols=203 Identities=17% Similarity=0.316 Sum_probs=167.0
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|++|+ .++.|.||++.
T Consensus 134 ~~~v~~v~~s~~~-----------~~l~~~~-----~dg~i~iwd~~--------------------------------- 164 (401)
T 4aez_A 134 STYVASVKWSHDG-----------SFLSVGL-----GNGLVDIYDVE--------------------------------- 164 (401)
T ss_dssp TCCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT---------------------------------
T ss_pred CCCEEEEEECCCC-----------CEEEEEC-----CCCeEEEEECc---------------------------------
Confidence 4566777777764 4777777 35689999872
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.......+.+|.+.|.++.|.+ .++++++.+|.|++||+.. ....+..+
T Consensus 165 --------~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~--------------------~~~~~~~~ 213 (401)
T 4aez_A 165 --------SQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRI--------------------ANHQIGTL 213 (401)
T ss_dssp --------TCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTS--------------------SSCEEEEE
T ss_pred --------CCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEeccc--------------------CcceeeEE
Confidence 2334456679999999999954 6899999999999999985 25667889
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEe--CCCcEEE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS--VDGHIAI 303 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s--~Dg~I~i 303 (359)
.+|...+.+++|+|++. +|++|+.||.|++||++. +... ..+.+|...|.+++|+|++..++++|+ .|+.|++
T Consensus 214 ~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~-~~~~---~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARS-SIPK---FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp ECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTC-SSEE---EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred cCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCC-CCcc---EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 99999999999999988 999999999999999987 4443 467789999999999999887999987 8999999
Q ss_pred EECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 304 WDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
||++++ .++..+. |...|++++|+|++.+++.... ..++.|++|+..++.
T Consensus 289 ~d~~~~-~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g--~~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 289 WNAATG-ARVNTVD-AGSQVTSLIWSPHSKEIMSTHG--FPDNNLSIWSYSSSG 338 (401)
T ss_dssp EETTTC-CEEEEEE-CSSCEEEEEECSSSSEEEEEEC--TTTCEEEEEEEETTE
T ss_pred EECCCC-CEEEEEe-CCCcEEEEEECCCCCeEEEEee--cCCCcEEEEecCCcc
Confidence 999987 6666665 6778999999999999988541 238899999987753
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=1.5e-22 Score=184.58 Aligned_cols=203 Identities=16% Similarity=0.253 Sum_probs=168.9
Q ss_pred ccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (359)
Q Consensus 65 ~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~ 144 (359)
..-+..++.|.|+. .++++|+ .++.|.+|++..
T Consensus 96 ~~~~v~~~~~~~~~-----------~~l~~~~-----~d~~i~~~d~~~------------------------------- 128 (337)
T 1gxr_A 96 RDNYIRSCKLLPDG-----------CTLIVGG-----EASTLSIWDLAA------------------------------- 128 (337)
T ss_dssp TTSBEEEEEECTTS-----------SEEEEEE-----SSSEEEEEECCC-------------------------------
T ss_pred CCCcEEEEEEcCCC-----------CEEEEEc-----CCCcEEEEECCC-------------------------------
Confidence 34556677888764 3677776 467899998731
Q ss_pred CcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE
Q 018235 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
..+.....+..|.+.|++++|+|++ .++++++.+|.|++||+.. ..++..
T Consensus 129 --------~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~---------------------~~~~~~ 178 (337)
T 1gxr_A 129 --------PTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHN---------------------QTLVRQ 178 (337)
T ss_dssp --------C--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEE
T ss_pred --------CCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCC---------------------Cceeee
Confidence 1334556777899999999999988 7899999999999999987 566788
Q ss_pred ecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEE
Q 018235 225 FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304 (359)
Q Consensus 225 ~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iw 304 (359)
+.+|...+.+++|+|++. +|++++.||.|++||++. +... .. ..|...+.+++|+|++. +|++++.++.|++|
T Consensus 179 ~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~---~~-~~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 179 FQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLRE-GRQL---QQ-HDFTSQIFSLGYCPTGE-WLAVGMESSNVEVL 251 (337)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-TEEE---EE-EECSSCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred eecccCceEEEEECCCCC-EEEEEecCCcEEEEECCC-CceE---ee-ecCCCceEEEEECCCCC-EEEEEcCCCcEEEE
Confidence 889999999999999998 999999999999999987 4433 22 34788999999999998 99999999999999
Q ss_pred ECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 305 DTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|++.. ....+..|...|.+++|+|++.+++.+.. ++.+++|+..++.
T Consensus 252 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 252 HVNKP--DKYQLHLHESCVLSLKFAYCGKWFVSTGK----DNLLNAWRTPYGA 298 (337)
T ss_dssp ETTSS--CEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC
T ss_pred ECCCC--CeEEEcCCccceeEEEECCCCCEEEEecC----CCcEEEEECCCCe
Confidence 99986 34567889999999999999999988876 8999999988765
No 57
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=5.1e-23 Score=202.43 Aligned_cols=162 Identities=19% Similarity=0.352 Sum_probs=143.9
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (359)
+...+.+|.+.|++++|+|++ .+||+++.|+.|++||... +.+..+.+|...+++++
T Consensus 377 ~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~~----------------------~~~~~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 377 LLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNG----------------------QLLQTLTGHSSSVWGVA 433 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTTC----------------------CEEEEEECCSSCEEEEE
T ss_pred EEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCC----------------------CEEEEecCCCCCeEEEE
Confidence 445677899999999999999 7899999999999999643 56778899999999999
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
|+|++. +|++++.|++|++|+.. +... ..+.+|...|.+++|+|++. +||+++.|+.|+|||.. + +++..+
T Consensus 434 ~s~d~~-~l~~~~~d~~v~~w~~~--~~~~---~~~~~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~-~-~~~~~~ 504 (577)
T 2ymu_A 434 FSPDDQ-TIASASDDKTVKLWNRN--GQLL---QTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN-G-QLLQTL 504 (577)
T ss_dssp ECTTSS-EEEEEETTSEEEEEETT--SCEE---EEEECCSSCEEEEEECTTSC-EEEEEETTSEEEEEETT-S-CEEEEE
T ss_pred ECCCCC-EEEEEcCCCEEEEEECC--CCEE---EEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCC-C-CEEEEE
Confidence 999998 99999999999999974 3333 56889999999999999999 99999999999999964 3 678889
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 317 KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 317 ~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.+|...|++|+|+|++++|+.+.. |+.|++||..
T Consensus 505 ~~h~~~v~~l~~s~dg~~l~s~~~----dg~v~lwd~~ 538 (577)
T 2ymu_A 505 TGHSSSVRGVAFSPDGQTIASASD----DKTVKLWNRN 538 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEET----TSEEEEECTT
T ss_pred eCCCCCEEEEEEcCCCCEEEEEEC----cCEEEEEeCC
Confidence 999999999999999999998876 8999999964
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=1.8e-22 Score=188.98 Aligned_cols=210 Identities=17% Similarity=0.212 Sum_probs=167.2
Q ss_pred ccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (359)
Q Consensus 65 ~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~ 144 (359)
..-+..++.|.|+. ..+|++|+ .++.|.||++.
T Consensus 98 ~~~~v~~~~~~~~~----------~~~l~s~~-----~d~~i~iwd~~-------------------------------- 130 (408)
T 4a11_B 98 HRYSVETVQWYPHD----------TGMFTSSS-----FDKTLKVWDTN-------------------------------- 130 (408)
T ss_dssp CSSCEEEEEECTTC----------TTCEEEEE-----TTSEEEEEETT--------------------------------
T ss_pred CCCcEEEEEEccCC----------CcEEEEEe-----CCCeEEEeeCC--------------------------------
Confidence 55677888998843 13566676 46789999873
Q ss_pred CcccCCCCCCCeEEEEEecCCCceeeEEEeCCCC--cEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCc
Q 018235 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNP--HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~--~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (359)
.... .....|...+.++.++|.++ .++++++.+|.|++||+.. ..++
T Consensus 131 ---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~---------------------~~~~ 179 (408)
T 4a11_B 131 ---------TLQT-ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS---------------------GSCS 179 (408)
T ss_dssp ---------TTEE-EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS---------------------SCCC
T ss_pred ---------CCcc-ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC---------------------ccee
Confidence 2222 33445889999999999653 4899999999999999987 5677
Q ss_pred EEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCccee------------cCccccCCCCCeEEEEecCCCCC
Q 018235 223 VKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV------------DPNPFIGHSASVEDLQWSPTEPD 290 (359)
Q Consensus 223 ~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~------------~~~~~~~h~~~V~~v~~sp~~~~ 290 (359)
..+.+|...+.+++|+|++..+|++|+.||.|++||++....... ....+.+|...|.+++|+|++.
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 258 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL- 258 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-
Confidence 889999999999999999985699999999999999987432211 1122367999999999999998
Q ss_pred EEEEEeCCCcEEEEECCCCC----------------------------------------------CceEEeecCCCCEE
Q 018235 291 VFASCSVDGHIAIWDTRVGK----------------------------------------------SALTSFKAHNADVN 324 (359)
Q Consensus 291 ~las~s~Dg~I~iwD~r~~~----------------------------------------------~~~~~~~~h~~~V~ 324 (359)
+|++++.||.|++||++++. .++..+.+|...|+
T Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~ 338 (408)
T 4a11_B 259 HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVD 338 (408)
T ss_dssp EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEE
Confidence 99999999999999998752 23445577999999
Q ss_pred EEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 325 VISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 325 ~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+++|+|++.+|+.+.. ++.|++|+..+++
T Consensus 339 ~~~~s~~~~~l~s~~~----dg~i~iw~~~~~~ 367 (408)
T 4a11_B 339 CCVFQSNFQELYSGSR----DCNILAWVPSLYE 367 (408)
T ss_dssp EEEEETTTTEEEEEET----TSCEEEEEECC--
T ss_pred EEEEcCCCCEEEEECC----CCeEEEEeCCCCC
Confidence 9999999999998876 8999999998765
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.92 E-value=4.9e-23 Score=195.89 Aligned_cols=236 Identities=12% Similarity=0.136 Sum_probs=164.2
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|-|+. .+|++|+ .++.|.||++.........
T Consensus 28 ~~~V~~v~~s~~g-----------~~la~g~-----~dg~v~iw~~~~~~~~~~~------------------------- 66 (447)
T 3dw8_B 28 ADIISTVEFNHSG-----------ELLATGD-----KGGRVVIFQQEQENKIQSH------------------------- 66 (447)
T ss_dssp GGSEEEEEECSSS-----------SEEEEEE-----TTSEEEEEEECC-----CC-------------------------
T ss_pred cCcEEEEEECCCC-----------CEEEEEc-----CCCeEEEEEecCCCCCCcc-------------------------
Confidence 3466788999985 4788887 4679999998522110000
Q ss_pred cccCCCCCCCeEEEEEecCC------------CceeeEEEeCCCC-cEEEEEeCCCcEEEEECCCCccccccccccccCC
Q 018235 146 DDEEGGSGTPILQLRKVAHQ------------GCVNRIRAMTQNP-HICASWADTGHVQVWDLRSHLNALAESETIVGQG 212 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~------------~~V~~i~~~p~~~-~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~ 212 (359)
.. ....+...+.+|. +.|++++|+|++. .++++++.||.|++|++................+
T Consensus 67 --~~---~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g 141 (447)
T 3dw8_B 67 --SR---GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDG 141 (447)
T ss_dssp --CC---CCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC----
T ss_pred --cc---cceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccc
Confidence 00 1333456777898 8899999999874 5888999999999999875221100000000000
Q ss_pred ----CCCCC--------------CCCCcEE-ecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCccee----cC
Q 018235 213 ----APQVS--------------NQSPLVK-FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV----DP 269 (359)
Q Consensus 213 ----~~~~~--------------~~~~~~~-~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~----~~ 269 (359)
..... ...+... ..+|...|.+++|+|++. +|++| .||.|++||++....... ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~ 219 (447)
T 3dw8_B 142 RYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKP 219 (447)
T ss_dssp ----CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCC
T ss_pred cccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeeccc
Confidence 00000 0011123 368999999999999998 99999 799999999985333221 01
Q ss_pred ccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCc----eEEeecCCC------------CEEEEEEcCCCC
Q 018235 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA----LTSFKAHNA------------DVNVISWNRCWL 333 (359)
Q Consensus 270 ~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~----~~~~~~h~~------------~V~~i~~s~~~~ 333 (359)
..+.+|...|.+++|+|++..+|++|+.||.|+|||++++ .. +..+..|.. .|++++|+|++.
T Consensus 220 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 298 (447)
T 3dw8_B 220 ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS-ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR 298 (447)
T ss_dssp SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC-SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC-ccccceeeEeccCCCccccccccccCceEEEEEECCCCC
Confidence 2467899999999999998449999999999999999987 43 577777775 899999999999
Q ss_pred eEEEEeeecccceEEEEEeCcC
Q 018235 334 AVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 334 ~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
+|+.+. .+.|++||.+.
T Consensus 299 ~l~~~~-----~~~v~iwd~~~ 315 (447)
T 3dw8_B 299 YMMTRD-----YLSVKVWDLNM 315 (447)
T ss_dssp EEEEEE-----SSEEEEEETTC
T ss_pred EEEEee-----CCeEEEEeCCC
Confidence 988663 37899999986
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.1e-22 Score=187.70 Aligned_cols=206 Identities=13% Similarity=0.144 Sum_probs=169.7
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.=+..++.|.|+. .+|++|+ .++.|.||++.
T Consensus 32 ~~~v~~~~~s~~~-----------~~l~~~~-----~dg~i~vwd~~--------------------------------- 62 (369)
T 3zwl_B 32 ERPLTQVKYNKEG-----------DLLFSCS-----KDSSASVWYSL--------------------------------- 62 (369)
T ss_dssp SSCEEEEEECTTS-----------CEEEEEE-----SSSCEEEEETT---------------------------------
T ss_pred eceEEEEEEcCCC-----------CEEEEEe-----CCCEEEEEeCC---------------------------------
Confidence 4567788898875 4777777 46689999873
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.......+.+|.+.|++++|+|++ .+|++++.||.|++||+.. .+.+..+
T Consensus 63 --------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~ 112 (369)
T 3zwl_B 63 --------NGERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSN---------------------GQCVATW 112 (369)
T ss_dssp --------TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTT---------------------CCEEEEE
T ss_pred --------CchhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEEe
Confidence 233446677899999999999988 7999999999999999987 5666666
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCC-----CcEEEEecCCCCcce-------ecCccccCCCC--CeEEEEecCCCCCE
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCN-----SCIYLWEPASDATWN-------VDPNPFIGHSA--SVEDLQWSPTEPDV 291 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~d-----g~I~lwd~~~~~~~~-------~~~~~~~~h~~--~V~~v~~sp~~~~~ 291 (359)
. |...+.+++|+|++. +|++++.+ |.|++||+....... .....+..|.. .+.+++|+|++. +
T Consensus 113 ~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 189 (369)
T 3zwl_B 113 K-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK-Y 189 (369)
T ss_dssp E-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC-E
T ss_pred e-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC-E
Confidence 6 788999999999998 99999988 999999997642210 01234455666 999999999998 9
Q ss_pred EEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 292 FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 292 las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|++++.||.|++||+++....+..+..|...|.+++|+|++.+++.+.. ++.|++||.+++.
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR----DTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC----CceEEEEECCCCc
Confidence 9999999999999999843677788899999999999999999988876 8899999998765
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=2.1e-22 Score=191.12 Aligned_cols=204 Identities=19% Similarity=0.316 Sum_probs=157.3
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|++ .+|++|+ .++.|.||++.
T Consensus 148 ~~V~sv~fspdg-----------~~lasgs-----~Dg~v~iWd~~---------------------------------- 177 (420)
T 4gga_A 148 EYISSVAWIKEG-----------NYLAVGT-----SSAEVQLWDVQ---------------------------------- 177 (420)
T ss_dssp CCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT----------------------------------
T ss_pred CcEEEEEECCCC-----------CEEEEEE-----CCCeEEEEEcC----------------------------------
Confidence 456788888885 4788888 46789999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
.........+|...|.++.+++ .++++|+.|+.+++||... ....+.++.
T Consensus 178 -------~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~--------------------~~~~~~~~~ 227 (420)
T 4gga_A 178 -------QQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRV--------------------AEHHVATLS 227 (420)
T ss_dssp -------TTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTS--------------------SSCEEEEEE
T ss_pred -------CCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecc--------------------cceeeEEec
Confidence 4455677789999999998865 6899999999999999987 356678899
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEe----------
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS---------- 296 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s---------- 296 (359)
+|...+..+.|+|.+. +|++++.|+.|++|+...+.........+..|...|.+++|+|.+..++++++
T Consensus 228 ~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 228 GHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred ccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 9999999999999998 99999999999999997643222112344456666666666665544444321
Q ss_pred -----------------------------------CCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeee
Q 018235 297 -----------------------------------VDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEV 341 (359)
Q Consensus 297 -----------------------------------~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~ 341 (359)
.|+.|+|||++++ .++..+.+|...|++|+|+|+|.+|+.+..
T Consensus 307 d~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~gH~~~V~~l~~spdg~~l~S~s~- 384 (420)
T 4gga_A 307 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMSPDGATVASAAA- 384 (420)
T ss_dssp ETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSCEEEEET-
T ss_pred eCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEec-
Confidence 4555666666655 566677889999999999999999998876
Q ss_pred cccceEEEEEeCcCC
Q 018235 342 MMEHFLFMILDCSRG 356 (359)
Q Consensus 342 ~~~d~~i~iwd~~~g 356 (359)
|+.|++|++...
T Consensus 385 ---D~tvriWdv~~~ 396 (420)
T 4gga_A 385 ---DETLRLWRCFEL 396 (420)
T ss_dssp ---TTEEEEECCSCS
T ss_pred ---CCeEEEEECCCC
Confidence 999999998653
No 62
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.9e-23 Score=195.50 Aligned_cols=167 Identities=15% Similarity=0.110 Sum_probs=141.3
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECC--CCccccccccccccCCCCCCCCCCCcEEec--CCCCceEEEEe
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLR--SHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGYAIDW 237 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~ 237 (359)
.+|.+.|++++|+|++..++|+++.||.|+|||+. . ...+..+. .|...+.+++|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~---------------------~~~~~~~~~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS---------------------KNVLKLRKRFCFSKRPNAISI 157 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS---------------------SSCEEEEEEEECSSCEEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC---------------------CceeeeeecccCCCCceEEEE
Confidence 46888999999999995556999999999999998 4 45556665 56789999999
Q ss_pred CCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC---CCCEEEEEeCCCcEEEEECCCCCCceE
Q 018235 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVDGHIAIWDTRVGKSALT 314 (359)
Q Consensus 238 sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---~~~~las~s~Dg~I~iwD~r~~~~~~~ 314 (359)
+|++. +|++|+.+|.|++|++............+.+|...|.+++|+|+ +. +|++|+.|+.|+|||++++ ..+.
T Consensus 158 sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~-~~~~ 234 (450)
T 2vdu_B 158 AEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQC-FIVD 234 (450)
T ss_dssp CTTSS-EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCT-TCEE
T ss_pred cCCCC-EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCC-ceee
Confidence 99998 99999999999999997733211023467889999999999999 77 9999999999999999987 5666
Q ss_pred E-eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 315 S-FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 315 ~-~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
. +.+|...|++++|+ ++.+|+++.. ++.|++||..++.
T Consensus 235 ~~~~~h~~~v~~~~~s-d~~~l~s~~~----d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 235 KWLFGHKHFVSSICCG-KDYLLLSAGG----DDKIFAWDWKTGK 273 (450)
T ss_dssp EECCCCSSCEEEEEEC-STTEEEEEES----SSEEEEEETTTCC
T ss_pred eeecCCCCceEEEEEC-CCCEEEEEeC----CCeEEEEECCCCc
Confidence 6 56899999999999 9999998875 8999999998876
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1e-22 Score=192.08 Aligned_cols=167 Identities=20% Similarity=0.273 Sum_probs=144.1
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 239 (359)
....|.+.|++++|+|++ .+|++++.+|.|++||+.. ...+..+.+|...+.+++|++
T Consensus 129 ~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~---------------------~~~~~~~~~~~~~v~~~~~~~ 186 (401)
T 4aez_A 129 AETDESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVES---------------------QTKLRTMAGHQARVGCLSWNR 186 (401)
T ss_dssp EECCTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEEEEEEET
T ss_pred eecCCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcC---------------------CeEEEEecCCCCceEEEEECC
Confidence 334589999999999988 7999999999999999987 567788999999999999954
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC
Q 018235 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH 319 (359)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h 319 (359)
. +|++|+.||.|++||++...... ..+.+|...|.+++|+|++. +|++|+.||.|++||++++ .++..+..|
T Consensus 187 --~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~-~~~~~~~~~ 258 (401)
T 4aez_A 187 --H-VLSSGSRSGAIHHHDVRIANHQI---GTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSS-IPKFTKTNH 258 (401)
T ss_dssp --T-EEEEEETTSEEEEEETTSSSCEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCS-SEEEEECCC
T ss_pred --C-EEEEEcCCCCEEEEecccCccee---eEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCC-CccEEecCC
Confidence 4 99999999999999998644444 56888999999999999988 9999999999999999987 778888899
Q ss_pred CCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 320 NADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 320 ~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
...|.+++|+|++..++.... +..++.|++|+..++.
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~-gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGG-GTMDKQIHFWNAATGA 295 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEEC-CTTTCEEEEEETTTCC
T ss_pred cceEEEEEECCCCCCEEEEec-CCCCCEEEEEECCCCC
Confidence 999999999998876655432 1238899999998775
No 64
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=2.1e-23 Score=192.44 Aligned_cols=209 Identities=15% Similarity=0.222 Sum_probs=166.2
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+.... ..+|++|+ .++.|.||++.
T Consensus 69 ~~~v~~~~~~~~~~~~-------~~~l~~~~-----~dg~i~v~d~~--------------------------------- 103 (366)
T 3k26_A 69 DENFYTCAWTYDSNTS-------HPLLAVAG-----SRGIIRIINPI--------------------------------- 103 (366)
T ss_dssp TCCEEEEEEEECTTTC-------CEEEEEEE-----TTCEEEEECTT---------------------------------
T ss_pred CCcEEEEEeccCCCCC-------CCEEEEec-----CCCEEEEEEch---------------------------------
Confidence 4567889999984211 25777777 46789999762
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.......+.+|.+.|++++|+|.+..+|++++.||.|++||+.. ...+..+
T Consensus 104 --------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~ 154 (366)
T 3k26_A 104 --------TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT---------------------DTLVAIF 154 (366)
T ss_dssp --------TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT---------------------TEEEEEE
T ss_pred --------hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec---------------------CeEEEEe
Confidence 22344566689999999999993338999999999999999987 4556666
Q ss_pred ---cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCccee-------------------------cCccccCCCC
Q 018235 226 ---GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV-------------------------DPNPFIGHSA 277 (359)
Q Consensus 226 ---~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~-------------------------~~~~~~~h~~ 277 (359)
.+|...+.+++|+|++. +|++|+.||.|++||++.. .... ......+|..
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSK-RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSH-HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred cccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCC-ccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 68999999999999998 9999999999999999863 2110 0012234999
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC-------------ceEEeecCCCCEEEEEEcCC--CCeEEEEeeec
Q 018235 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS-------------ALTSFKAHNADVNVISWNRC--WLAVCWHLEVM 342 (359)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~-------------~~~~~~~h~~~V~~i~~s~~--~~~l~~~~~~~ 342 (359)
.|.+++|+ +. +|++++.|+.|++||+++... .+..+..|...|++++|+|+ +.+|+.+..
T Consensus 233 ~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~-- 307 (366)
T 3k26_A 233 YVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ-- 307 (366)
T ss_dssp CCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT--
T ss_pred eEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec--
Confidence 99999999 55 999999999999999987621 25667889999999999999 999988866
Q ss_pred ccceEEEEEeCcCCc
Q 018235 343 MEHFLFMILDCSRGE 357 (359)
Q Consensus 343 ~~d~~i~iwd~~~g~ 357 (359)
++.|++|+...+.
T Consensus 308 --dg~i~vwd~~~~~ 320 (366)
T 3k26_A 308 --VGKLYVWDLEVED 320 (366)
T ss_dssp --TSCEEEEECCSSS
T ss_pred --CCcEEEEECCCCC
Confidence 8899999998764
No 65
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=7.1e-23 Score=206.78 Aligned_cols=203 Identities=17% Similarity=0.257 Sum_probs=162.9
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|+. .+|+.|+ .++.|.||++.
T Consensus 431 ~~v~~v~~s~~g-----------~~l~sgs-----~Dg~v~vwd~~---------------------------------- 460 (694)
T 3dm0_A 431 HFVEDVVLSSDG-----------QFALSGS-----WDGELRLWDLA---------------------------------- 460 (694)
T ss_dssp SCEEEEEECTTS-----------SEEEEEE-----TTSEEEEEETT----------------------------------
T ss_pred CcEEEEEECCCC-----------CEEEEEe-----CCCcEEEEECC----------------------------------
Confidence 456677888874 4777777 46799999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
.......+.+|.+.|++++|+|++ .+|+|++.||+|+|||+...... .......
T Consensus 461 -------~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~------------------~~~~~~~ 514 (694)
T 3dm0_A 461 -------AGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKY------------------TISEGGE 514 (694)
T ss_dssp -------TTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEE------------------EECSSTT
T ss_pred -------CCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcce------------------eeccCCC
Confidence 445556778999999999999999 78999999999999997651100 0001124
Q ss_pred CCCCceEEEEeCCCCC-CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEE
Q 018235 227 GHKDEGYAIDWNPITT-GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~-~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (359)
+|...|.+++|+|++. ..|++|+.|++|++||++. .... ..+.+|...|.+++|+|++. +|++|+.||+|+|||
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~---~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN-CKLR---STLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWD 589 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-CCEE---EEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEE
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC-CcEE---EEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEE
Confidence 7888999999999873 3899999999999999987 4443 56889999999999999998 999999999999999
Q ss_pred CCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 306 TRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 306 ~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++++ .++..+. +...|++++|+|++.+++.+. ++.|++||..++.
T Consensus 590 ~~~~-~~~~~~~-~~~~v~~~~~sp~~~~l~~~~-----~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 590 LAEG-KKLYSLE-ANSVIHALCFSPNRYWLCAAT-----EHGIKIWDLESKS 634 (694)
T ss_dssp TTTT-EEEECCB-CSSCEEEEEECSSSSEEEEEE-----TTEEEEEETTTTE
T ss_pred CCCC-ceEEEec-CCCcEEEEEEcCCCcEEEEEc-----CCCEEEEECCCCC
Confidence 9987 5555554 456799999999998887664 4569999998765
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.91 E-value=3.6e-23 Score=195.43 Aligned_cols=204 Identities=10% Similarity=0.111 Sum_probs=158.8
Q ss_pred cccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 64 HIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDED 143 (359)
Q Consensus 64 ~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d 143 (359)
...-+..++.|.|+. .+|++|+ .++.|.||++.
T Consensus 137 ~h~~~v~~~~~~~~~-----------~~l~s~s-----~d~~i~iwd~~------------------------------- 169 (420)
T 3vl1_A 137 AHVSEITKLKFFPSG-----------EALISSS-----QDMQLKIWSVK------------------------------- 169 (420)
T ss_dssp SSSSCEEEEEECTTS-----------SEEEEEE-----TTSEEEEEETT-------------------------------
T ss_pred cccCccEEEEECCCC-----------CEEEEEe-----CCCeEEEEeCC-------------------------------
Confidence 344567788888874 3677777 46789999873
Q ss_pred CCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcE
Q 018235 144 SDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (359)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (359)
.......+.+|.+.|++++|+|++ .+|++++.||.|++||+... +++.
T Consensus 170 ----------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~---------------------~~~~ 217 (420)
T 3vl1_A 170 ----------DGSNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTG---------------------TTIH 217 (420)
T ss_dssp ----------TCCCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTT---------------------EEEE
T ss_pred ----------CCcCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCC---------------------ceeE
Confidence 111224556899999999999998 78999999999999999862 2222
Q ss_pred Eec------------------------CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCe
Q 018235 224 KFG------------------------GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASV 279 (359)
Q Consensus 224 ~~~------------------------~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V 279 (359)
.+. .|...+.+++|+|++. +|++|+.||.|++||+++..... ....+|...|
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v 293 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTI---QLPSKFTCSC 293 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEE---EECCTTSSCE
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeE---EcccccCCCc
Confidence 222 2445677778899998 99999999999999998743322 3345688999
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec-CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 280 EDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 280 ~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~-h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
.+++|+|++..+|++|+.||.|++||++++..++..+.. |...|+++.|. ++.+++.+.. ++.|++|+...
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~----d~~v~iw~~~~ 365 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGF----DTSIKLDIISD 365 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETT----TEEEEEEEECC
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecC----CccEEEEeccC
Confidence 999999999889999999999999999997555777766 77888988665 6777777655 89999999765
No 67
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=6.4e-24 Score=197.83 Aligned_cols=207 Identities=13% Similarity=0.096 Sum_probs=157.3
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|+ .++.|.||++..-
T Consensus 55 ~~~v~~~~~s~~~-----------~~l~s~s-----~d~~v~vwd~~~~------------------------------- 87 (377)
T 3dwl_C 55 DKIVTCVDWAPKS-----------NRIVTCS-----QDRNAYVYEKRPD------------------------------- 87 (377)
T ss_dssp SSCEEEEEECTTT-----------CCEEEEE-----TTSSEEEC------------------------------------
T ss_pred CceEEEEEEeCCC-----------CEEEEEe-----CCCeEEEEEcCCC-------------------------------
Confidence 4567889998884 3677777 4678999988310
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
........+.+|.+.|++++|+|++ .+|++++.||.|++||+.... .......+
T Consensus 88 -------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~------------------~~~~~~~~ 141 (377)
T 3dwl_C 88 -------GTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQEN------------------DWWVSKHL 141 (377)
T ss_dssp --------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----------------------CCCCEEE
T ss_pred -------CceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcc------------------cceeeeEe
Confidence 0112335567899999999999988 789999999999999998721 01246677
Q ss_pred cC-CCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCC--------------cceecCccccCCCCCeEEEEecCCCCC
Q 018235 226 GG-HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA--------------TWNVDPNPFIGHSASVEDLQWSPTEPD 290 (359)
Q Consensus 226 ~~-h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~--------------~~~~~~~~~~~h~~~V~~v~~sp~~~~ 290 (359)
.+ |...|++++|+|++. +|++|+.||.|++||++... ........+ +|...|.+++|+|++.
T Consensus 142 ~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~- 218 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN- 218 (377)
T ss_dssp CSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-
T ss_pred ecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-
Confidence 77 999999999999998 99999999999999986311 001111344 8999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCCCc----eEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 291 VFASCSVDGHIAIWDTRVGKSA----LTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 291 ~las~s~Dg~I~iwD~r~~~~~----~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+|++++.||.|+|||++++ .. +..+..|...|++++|+|++.+|+.+.. ++.+ +|+..
T Consensus 219 ~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----~~~~-~~~~~ 280 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAP-EQPPRALITVKLSQLPLRSLLWANESAIVAAGYN----YSPI-LLQGN 280 (377)
T ss_dssp CEEEEETTTEEC-CEECST-TSCEEECCCEECSSSCEEEEEEEETTEEEEEESS----SSEE-EECCC
T ss_pred EEEEEeCCCcEEEEECCCC-CCcceeeEeecCCCCceEEEEEcCCCCEEEEEcC----CcEE-EEEeC
Confidence 9999999999999999987 44 6677899999999999999998887754 5655 56544
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=2.7e-22 Score=182.92 Aligned_cols=210 Identities=14% Similarity=0.234 Sum_probs=169.4
Q ss_pred ccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 63 FHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDE 142 (359)
Q Consensus 63 ~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 142 (359)
....-+..++.|.|+. .++++|. ++.|.||++..-.
T Consensus 48 ~~h~~~v~~~~~~~~~-----------~~l~~~~------dg~i~iw~~~~~~--------------------------- 83 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPT-----------RHVYTGG------KGCVKVWDISHPG--------------------------- 83 (337)
T ss_dssp ECCSSCCCEEEECSSS-----------SEEEEEC------BSEEEEEETTSTT---------------------------
T ss_pred ccCCCceEEEEEecCC-----------cEEEEcC------CCeEEEEECCCCC---------------------------
Confidence 3456677788888874 3666664 4689999883100
Q ss_pred CCCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCc
Q 018235 143 DSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222 (359)
Q Consensus 143 d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (359)
...+.......+|.+.|++++|+|++ .++++++.+|.|++||+... .....
T Consensus 84 ---------~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~-------------------~~~~~ 134 (337)
T 1gxr_A 84 ---------NKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAP-------------------TPRIK 134 (337)
T ss_dssp ---------CCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC---------------------EEE
T ss_pred ---------ceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCC-------------------Cccee
Confidence 01333444455899999999999998 78999999999999999872 12245
Q ss_pred EEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEE
Q 018235 223 VKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302 (359)
Q Consensus 223 ~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~ 302 (359)
..+.+|...+.+++|+|++. +|++|+.||.|++||+++ +... ..+.+|...|.+++|+|++. +|++++.||.|+
T Consensus 135 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~-~~~~---~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~ 208 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHN-QTLV---RQFQGHTDGASCIDISNDGT-KLWTGGLDNTVR 208 (337)
T ss_dssp EEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEE---EEECCCSSCEEEEEECTTSS-EEEEEETTSEEE
T ss_pred eecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCC-Ccee---eeeecccCceEEEEECCCCC-EEEEEecCCcEE
Confidence 67888999999999999998 999999999999999987 4444 56778999999999999998 999999999999
Q ss_pred EEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 303 IWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 303 iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+||++++ ..+..+ .|...+.+++|+|++.+++.+.. ++.+++|+...+.
T Consensus 209 ~~d~~~~-~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~----~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 209 SWDLREG-RQLQQH-DFTSQIFSLGYCPTGEWLAVGME----SSNVEVLHVNKPD 257 (337)
T ss_dssp EEETTTT-EEEEEE-ECSSCEEEEEECTTSSEEEEEET----TSCEEEEETTSSC
T ss_pred EEECCCC-ceEeee-cCCCceEEEEECCCCCEEEEEcC----CCcEEEEECCCCC
Confidence 9999987 555444 47888999999999999998876 7889999988764
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=9.5e-24 Score=201.48 Aligned_cols=171 Identities=12% Similarity=0.133 Sum_probs=138.0
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
....+|...|++|+|+|.++.+||+|+.||.|+|||+... .......+.+|...|++|+|+
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-------------------~~~~~~~~~gH~~~V~~l~f~ 173 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-------------------DKPTFIKGIGAGGSITGLKFN 173 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-------------------SCCEEECCCSSSCCCCEEEEC
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-------------------CceeEEEccCCCCCEEEEEEe
Confidence 3456899999999999987789999999999999999762 123344567899999999999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (359)
|.+..+|+||+.||+|++||++. +.... ......+...+.+++|+|++. +|++|+.||.|++||++. +.+..+.+
T Consensus 174 p~~~~~l~s~s~D~~v~iwd~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~--~~~~~~~~ 248 (435)
T 4e54_B 174 PLNTNQFYASSMEGTTRLQDFKG-NILRV-FASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG--KELWNLRM 248 (435)
T ss_dssp SSCTTEEEEECSSSCEEEEETTS-CEEEE-EECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS--CBCCCSBC
T ss_pred CCCCCEEEEEeCCCEEEEeeccC-CceeE-EeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc--ceeEEEec
Confidence 96444999999999999999975 33220 112223445688999999998 999999999999999986 46677889
Q ss_pred CCCCEEEEEEcCCCCeEE-EEeeecccceEEEEEeCcCCc
Q 018235 319 HNADVNVISWNRCWLAVC-WHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 319 h~~~V~~i~~s~~~~~l~-~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|...|++++|+|++..++ .+.. |+.|++||.+.+.
T Consensus 249 h~~~v~~v~~~p~~~~~~~s~s~----d~~v~iwd~~~~~ 284 (435)
T 4e54_B 249 HKKKVTHVALNPCCDWFLATASV----DQTVKIWDLRQVR 284 (435)
T ss_dssp CSSCEEEEEECTTCSSEEEEEET----TSBCCEEETTTCC
T ss_pred ccceEEeeeecCCCceEEEEecC----cceeeEEeccccc
Confidence 999999999999987554 4443 8899999988754
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.91 E-value=3.3e-23 Score=188.96 Aligned_cols=174 Identities=16% Similarity=0.213 Sum_probs=141.4
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
..+.+|.+.|++++|+|++ .+||+++.||.|+|||+..... .......+.+|...|.+++|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~-----------------~~~~~~~~~~~~~~v~~~~~~ 66 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTS-----------------NWELSDSWRAHDSSIVAIDWA 66 (351)
T ss_dssp CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSC-----------------CEEEEEEEECCSSCEEEEEEC
T ss_pred ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCC-----------------cceecceeccCCCcEEEEEEc
Confidence 3456899999999999998 7999999999999999986210 013566788999999999999
Q ss_pred CC--CCCeEEEEcCCCcEEEEecCCCCcc-----eecCccccCCCCCeEEEEecCC--CCCEEEEEeCCCcEEEEECCCC
Q 018235 239 PI--TTGRLVTGDCNSCIYLWEPASDATW-----NVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVDGHIAIWDTRVG 309 (359)
Q Consensus 239 p~--~~~~l~sgs~dg~I~lwd~~~~~~~-----~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~Dg~I~iwD~r~~ 309 (359)
|. +. +|++|+.||.|++||++.+... ......+.+|...|.+++|+|+ +. +|++++.||.|+|||++++
T Consensus 67 ~~~d~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 67 SPEYGR-IIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEP 144 (351)
T ss_dssp CGGGCS-EEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSST
T ss_pred CCCCCC-EEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCCh
Confidence 94 66 9999999999999999874210 0112567789999999999999 77 9999999999999999865
Q ss_pred CC-----------------------------------------------------------ceEEeecCCCCEEEEEEcC
Q 018235 310 KS-----------------------------------------------------------ALTSFKAHNADVNVISWNR 330 (359)
Q Consensus 310 ~~-----------------------------------------------------------~~~~~~~h~~~V~~i~~s~ 330 (359)
.. .+..+.+|...|++++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 224 (351)
T 3f3f_A 145 SDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP 224 (351)
T ss_dssp TCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC
T ss_pred HHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC
Confidence 21 1334467999999999999
Q ss_pred CC----CeEEEEeeecccceEEEEEeCcCC
Q 018235 331 CW----LAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 331 ~~----~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
++ .+++.+.. |+.|++|+.+.+
T Consensus 225 ~~~~~~~~l~s~~~----dg~i~iwd~~~~ 250 (351)
T 3f3f_A 225 SIGRWYQLIATGCK----DGRIRIFKITEK 250 (351)
T ss_dssp CSSCSSEEEEEEET----TSCEEEEEEEEC
T ss_pred CCCCcceEEEEEcC----CCeEEEEeCCCC
Confidence 98 67777765 899999998764
No 71
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=3.3e-23 Score=197.06 Aligned_cols=175 Identities=15% Similarity=0.213 Sum_probs=135.1
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
.+|.+.|++++|+|++ .+|+++ .||.|+|||+........... ..+ ..+.+|...|++++|+|++
T Consensus 174 ~~h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~------------~~~-~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 174 NAHTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVD------------IKP-ANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEE------------CCC-SSGGGCCCCEEEEEECSSC
T ss_pred cCCCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeee------------ccc-ccccccCcceEEEEECCCC
Confidence 5799999999999998 788888 799999999985211100000 001 1366899999999999998
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccCCCC------------CeEEEEecCCCCCEEEEEeCCCcEEEEECCCC
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA------------SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~------------~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (359)
..+|++|+.||.|++||+++..........+.+|.. .|.+++|+|++. +|++++. +.|+|||++..
T Consensus 239 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 239 CNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNME 316 (447)
T ss_dssp TTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCC
T ss_pred CcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCC
Confidence 339999999999999999874322111245667765 999999999998 9999999 99999999973
Q ss_pred CCceEEeecCCCC---------------EEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 310 KSALTSFKAHNAD---------------VNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 310 ~~~~~~~~~h~~~---------------V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..++..+..|... +..++|+|++.+|+.+.. ++.|++|+..++.
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~----dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 317 NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY----NNFFRMFDRNTKR 375 (447)
T ss_dssp SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS----TTEEEEEETTTCC
T ss_pred ccccceeeccccccccccccccccccccceEEEECCCCCEEEEecc----CCEEEEEEcCCCc
Confidence 3777778777532 334899999999987766 8999999998775
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=1.3e-22 Score=187.89 Aligned_cols=206 Identities=11% Similarity=0.045 Sum_probs=165.7
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|++|+ .++.|.||++..
T Consensus 52 ~~~v~~~~~~~~~-----------~~l~~~~-----~dg~i~vwd~~~-------------------------------- 83 (372)
T 1k8k_C 52 NGQVTGVDWAPDS-----------NRIVTCG-----TDRNAYVWTLKG-------------------------------- 83 (372)
T ss_dssp SSCEEEEEEETTT-----------TEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred CCcccEEEEeCCC-----------CEEEEEc-----CCCeEEEEECCC--------------------------------
Confidence 4567788888874 3677776 366899999841
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
...........|.+.|++++|+|++ .++++++.+|.|++||+...... .......
T Consensus 84 -------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~-----------------~~~~~~~ 138 (372)
T 1k8k_C 84 -------RTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDW-----------------WVCKHIK 138 (372)
T ss_dssp -------TEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTE-----------------EEEEEEC
T ss_pred -------CeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcc-----------------eeeeeee
Confidence 0222334557899999999999998 89999999999999999872100 0012334
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCC-----------------CCcceecCccccCCCCCeEEEEecCCC
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS-----------------DATWNVDPNPFIGHSASVEDLQWSPTE 288 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~-----------------~~~~~~~~~~~~~h~~~V~~v~~sp~~ 288 (359)
.+|...+.+++|+|++. +|++|+.||.|++||++. .+... ..+.+|...|.+++|+|++
T Consensus 139 ~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELM---FESSSSCGWVHGVCFSANG 214 (372)
T ss_dssp TTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEE---EECCCCSSCEEEEEECSSS
T ss_pred cccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhhe---EecCCCCCeEEEEEECCCC
Confidence 67889999999999998 999999999999999742 12332 4567899999999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 289 PDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 289 ~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
. +|++++.||.|++||++++ .++..+..|...|++++|+|++.+++.+ . ++.+++|+...
T Consensus 215 ~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~----d~~i~i~~~~~ 274 (372)
T 1k8k_C 215 S-RVAWVSHDSTVCLADADKK-MAVATLASETLPLLAVTFITESSLVAAG-H----DCFPVLFTYDS 274 (372)
T ss_dssp S-EEEEEETTTEEEEEEGGGT-TEEEEEECSSCCEEEEEEEETTEEEEEE-T----TSSCEEEEEET
T ss_pred C-EEEEEeCCCEEEEEECCCC-ceeEEEccCCCCeEEEEEecCCCEEEEE-e----CCeEEEEEccC
Confidence 8 9999999999999999987 7888889999999999999999988776 4 78899999876
No 73
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=7.4e-23 Score=186.25 Aligned_cols=167 Identities=9% Similarity=0.016 Sum_probs=127.9
Q ss_pred CeEEEEEecCCCceeeEEEeC---CCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC--
Q 018235 155 PILQLRKVAHQGCVNRIRAMT---QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK-- 229 (359)
Q Consensus 155 ~~~~~~~~~H~~~V~~i~~~p---~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-- 229 (359)
.........|...++.++|+| ++ .+||+++.|++|+|||+.+ ++.+.++.+|.
T Consensus 168 G~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~T---------------------Gk~l~tL~g~~~~ 225 (356)
T 2w18_A 168 GGGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKT---------------------GQLLKKMHIDDSY 225 (356)
T ss_dssp SCEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTT---------------------CCEEEEEECCC--
T ss_pred CceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCC---------------------CcEEEEEcCCCcc
Confidence 345566678999999999988 44 7999999999999999987 67788887654
Q ss_pred -CceEEEEeCCCCCCeE------------EEEcCCCcEEEEecCCCCcceecC-cc-ccCCCCCeEEEEecCCCCCEEEE
Q 018235 230 -DEGYAIDWNPITTGRL------------VTGDCNSCIYLWEPASDATWNVDP-NP-FIGHSASVEDLQWSPTEPDVFAS 294 (359)
Q Consensus 230 -~~v~~l~~sp~~~~~l------------~sgs~dg~I~lwd~~~~~~~~~~~-~~-~~~h~~~V~~v~~sp~~~~~las 294 (359)
..+.+++|+|++. ++ +||+.|++|++||+.+ +..+... .. -.+|...+.+..++ +. ++|+
T Consensus 226 v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lAS 300 (356)
T 2w18_A 226 QASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAA 300 (356)
T ss_dssp -CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TT-EEEE
T ss_pred eeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CC-EEEE
Confidence 3677789999887 54 6788999999999987 4432100 00 14677666655555 55 8999
Q ss_pred EeCCCcEEEEECCCCCCceEEeecCCCCEE-EEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVN-VISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 295 ~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~-~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
++.|++|+|||++++ +++.++.+|...+. +++|+|+|++|+.+.. |+.|+||+.
T Consensus 301 gS~DgTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~----D~TIklWd~ 355 (356)
T 2w18_A 301 ILTSGTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGTDSHLLAGQK----DGNIFVYHY 355 (356)
T ss_dssp EETTSCEEEEETTTC-SEEEEECCC--CCCCEEEECSSSSEEEEECT----TSCEEEEEE
T ss_pred EcCCCcEEEEECCCC-cEEEEecCCCCCeEEEEEECCCCCEEEEEEC----CCcEEEecC
Confidence 999999999999998 78888988887655 6899999999998876 999999985
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=2.3e-22 Score=188.26 Aligned_cols=165 Identities=21% Similarity=0.347 Sum_probs=140.6
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
+|.+.|++++|+|.+..++++++.||.|++||+.. ...+..+. +...+.++.|++.+.
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---------------------~~~~~~~~-~~~~~~~~~~~~~~~ 154 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT---------------------LQTADVFN-FEETVYSHHMSPVST 154 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT---------------------TEEEEEEE-CSSCEEEEEECSSCS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC---------------------Cccceecc-CCCceeeeEeecCCC
Confidence 59999999999996558999999999999999987 44555554 677899999998643
Q ss_pred C--eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe----
Q 018235 243 G--RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF---- 316 (359)
Q Consensus 243 ~--~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~---- 316 (359)
. +|++|+.+|.|++||+++ +... ..+.+|...|.+++|+|++..+|++|+.||.|++||++....++..+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~-~~~~---~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 230 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKS-GSCS---HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHN 230 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSS-SCCC---EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTT
T ss_pred CCcEEEEEcCCCeEEEEeCCC-ccee---eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccc
Confidence 2 899999999999999987 3433 56788999999999999999789999999999999999874455554
Q ss_pred -----------ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 317 -----------KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 317 -----------~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..|...|++++|+|++.+++.+.. ++.|++|+..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~ 278 (408)
T 4a11_B 231 GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT----DNRMRLWNSSNGE 278 (408)
T ss_dssp TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCC
T ss_pred cccceeeccccccccCceeEEEEcCCCCEEEEecC----CCeEEEEECCCCc
Confidence 578899999999999999998876 8899999998765
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=3.2e-22 Score=184.08 Aligned_cols=210 Identities=15% Similarity=0.213 Sum_probs=163.3
Q ss_pred ccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (359)
Q Consensus 65 ~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~ 144 (359)
..-+..++.|.|+. ..++++|+... .++.|.||++..
T Consensus 17 h~~~v~~~~~~p~~----------~~l~~~~s~~~--~d~~v~iw~~~~------------------------------- 53 (357)
T 3i2n_A 17 FNYTVFDCKWVPCS----------AKFVTMGNFAR--GTGVIQLYEIQH------------------------------- 53 (357)
T ss_dssp CSSCEEEEEECTTS----------SEEEEEEC--C--CCEEEEEEEECS-------------------------------
T ss_pred CCCceEEEEEcCCC----------ceEEEecCccC--CCcEEEEEeCCC-------------------------------
Confidence 34577899999975 24566666321 367899999831
Q ss_pred CcccCCCCCCCeEEEEEecCCCceeeEEEeCCC--CcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCc
Q 018235 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQN--PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~--~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (359)
.........+|.+.|++++|+|++ ..++++++.||.|++||+.. ...++
T Consensus 54 ---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------------------~~~~~ 104 (357)
T 3i2n_A 54 ---------GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA--------------------PEMPV 104 (357)
T ss_dssp ---------SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS--------------------CSSCS
T ss_pred ---------CcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC--------------------CCccE
Confidence 222334455899999999999983 37899999999999999987 22378
Q ss_pred EEecCCCCceEEEEe------CCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCC----CCeEEEE----ecCCC
Q 018235 223 VKFGGHKDEGYAIDW------NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHS----ASVEDLQ----WSPTE 288 (359)
Q Consensus 223 ~~~~~h~~~v~~l~~------sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~----~~V~~v~----~sp~~ 288 (359)
..+.+|...|.+++| +|++. +|++|+.||.|++||++...... ..+..|. ..|.+++ |+|++
T Consensus 105 ~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 105 YSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPV---ANMEPVQGENKRDCWTVAFGNAYNQEE 180 (357)
T ss_dssp EEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCS---EEECCCTTSCCCCEEEEEEECCCC-CC
T ss_pred EEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcc---eeccccCCCCCCceEEEEEEeccCCCC
Confidence 899999999999955 67887 99999999999999998744333 3444443 3899998 78888
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcC---CCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 289 PDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNR---CWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 289 ~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~---~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
. +|++++.||.|++||++++ .. .....|...|++++|+| ++.+++.+.. ++.|++|+.+++.
T Consensus 181 ~-~l~~~~~d~~i~i~d~~~~-~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 181 R-VVCAGYDNGDIKLFDLRNM-AL-RWETNIKNGVCSLEFDRKDISMNKLVATSL----EGKFHVFDMRTQH 245 (357)
T ss_dssp C-EEEEEETTSEEEEEETTTT-EE-EEEEECSSCEEEEEESCSSSSCCEEEEEES----TTEEEEEEEEEEE
T ss_pred C-EEEEEccCCeEEEEECccC-ce-eeecCCCCceEEEEcCCCCCCCCEEEEECC----CCeEEEEeCcCCC
Confidence 8 9999999999999999986 43 44567899999999999 8899888866 8899999987654
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.2e-22 Score=191.07 Aligned_cols=162 Identities=15% Similarity=0.223 Sum_probs=144.0
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
..+..|.+.|++++|+|++ .+|++++.+|.|++||+.. ..++..+.+|...+.+++|+
T Consensus 241 ~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~---------------------~~~~~~~~~~~~~i~~~~~~ 298 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGN---------------------GNSQNCFYGHSQSIVSASWV 298 (425)
T ss_dssp EEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSS---------------------BSCSEEECCCSSCEEEEEEE
T ss_pred eeeccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCC---------------------CccceEecCCCccEEEEEEC
Confidence 3455899999999999998 7999999999999999987 56778888999999999999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC-------
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS------- 311 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~------- 311 (359)
|++ +|++++.||.|++||+++ +... ..+..|...|.+++|+|++. +|++++.||.|+|||+++. .
T Consensus 299 ~~~--~l~~~~~d~~i~i~d~~~-~~~~---~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~-~~~~~~~~ 370 (425)
T 1r5m_A 299 GDD--KVISCSMDGSVRLWSLKQ-NTLL---ALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKL-NSKSRSLY 370 (425)
T ss_dssp TTT--EEEEEETTSEEEEEETTT-TEEE---EEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHH-HC------
T ss_pred CCC--EEEEEeCCCcEEEEECCC-CcEe---EecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCC-ccceeeee
Confidence 987 899999999999999987 4444 56778999999999999998 9999999999999999976 4
Q ss_pred -------------ceEEeecCCC--CEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 312 -------------ALTSFKAHNA--DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 312 -------------~~~~~~~h~~--~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
++..+..|.. .|++++|+|++.+|+.+.. ++.|++|+..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~iw~~~ 424 (425)
T 1r5m_A 371 GNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS----LQEGSVVAIP 424 (425)
T ss_dssp --------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES----SSCCEEEECC
T ss_pred cccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec----CceEEEEeec
Confidence 6777888866 9999999999999988876 8899999975
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.90 E-value=2.8e-23 Score=191.68 Aligned_cols=243 Identities=14% Similarity=0.147 Sum_probs=172.0
Q ss_pred CCceeeeChhHhhhhhccc-ccCcceeEEEEe-ccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCC
Q 018235 46 EGEELQCDPTAYNSLHAFH-IGWPCLSFDIVR-DTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVP 123 (359)
Q Consensus 46 ~~~~l~~~~~~Y~~~~~~~-~~wP~ls~~~~p-d~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~ 123 (359)
++....+|..-...+..+. ..-+..++.|.| +. .+|++|+ .++.|.||++.
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------~~l~s~~-----~dg~i~iwd~~----------- 146 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-----------NLLLSVS-----KDHALRLWNIQ----------- 146 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-----------TEEEEEE-----TTSCEEEEETT-----------
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-----------CEEEEEe-----CCCeEEEEEee-----------
Confidence 3444444443334444443 456778888888 43 4677777 46789999873
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEE---ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCcc
Q 018235 124 NKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRK---VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLN 200 (359)
Q Consensus 124 ~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~ 200 (359)
.......+ .+|.+.|++++|+|++ .++++++.||.|++||+.....
T Consensus 147 ------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~ 195 (366)
T 3k26_A 147 ------------------------------TDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRM 195 (366)
T ss_dssp ------------------------------TTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHH
T ss_pred ------------------------------cCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCcc
Confidence 22333343 5799999999999988 7999999999999999986321
Q ss_pred c--ccc------ccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcc-------
Q 018235 201 A--LAE------SETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATW------- 265 (359)
Q Consensus 201 ~--~~~------~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~------- 265 (359)
. +.. ........ .............+|...|.+++|+ +. +|++|+.||.|++||++.....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 271 (366)
T 3k26_A 196 MNAIKESYDYNPNKTNRPFI-SQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPS 271 (366)
T ss_dssp HHHHHHHHTCCGGGCSSCCC-CEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTT
T ss_pred ccccceeEEecCCCCccccc-ceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccC
Confidence 1 000 00000000 0000122344566799999999998 55 9999999999999999874321
Q ss_pred ---eecCccccCCCCCeEEEEecCC--CCCEEEEEeCCCcEEEEECCCCCC---ceEEeecC--CCCEEEEEEcCCCCeE
Q 018235 266 ---NVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVDGHIAIWDTRVGKS---ALTSFKAH--NADVNVISWNRCWLAV 335 (359)
Q Consensus 266 ---~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~Dg~I~iwD~r~~~~---~~~~~~~h--~~~V~~i~~s~~~~~l 335 (359)
......+.+|...|.+++|+|+ +. +|++|+.||.|+|||++++.. ....+..| ...|++++|+|++.+|
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 350 (366)
T 3k26_A 272 ESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL 350 (366)
T ss_dssp CCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE
Confidence 0112556789999999999999 88 999999999999999998721 33356666 7899999999999999
Q ss_pred EEEeeecccceEEEEEeCcC
Q 018235 336 CWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 336 ~~~~~~~~~d~~i~iwd~~~ 355 (359)
+.+.. ++.|++|+..+
T Consensus 351 ~s~~~----dg~i~iwd~~~ 366 (366)
T 3k26_A 351 IAVCD----DASIWRWDRLR 366 (366)
T ss_dssp EEEET----TSEEEEEEC--
T ss_pred EEEeC----CCEEEEEEecC
Confidence 98876 89999999753
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.90 E-value=1.6e-22 Score=206.99 Aligned_cols=201 Identities=14% Similarity=0.210 Sum_probs=170.9
Q ss_pred cceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 018235 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (359)
Q Consensus 68 P~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~ 147 (359)
+..++.|-|+. .++++|+ .++.|.||++.
T Consensus 15 ~v~~i~~sp~~-----------~~la~~~-----~~g~v~iwd~~----------------------------------- 43 (814)
T 3mkq_A 15 RVKGIDFHPTE-----------PWVLTTL-----YSGRVEIWNYE----------------------------------- 43 (814)
T ss_dssp CEEEEEECSSS-----------SEEEEEE-----TTSEEEEEETT-----------------------------------
T ss_pred ceEEEEECCCC-----------CEEEEEe-----CCCEEEEEECC-----------------------------------
Confidence 46788898985 4777777 36789999872
Q ss_pred cCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC
Q 018235 148 EEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG 227 (359)
Q Consensus 148 ~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (359)
.......+.+|.+.|++++|+|++ .+||+++.+|.|++||+.. ...+..+.+
T Consensus 44 ------~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~---------------------~~~~~~~~~ 95 (814)
T 3mkq_A 44 ------TQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNT---------------------GEKVVDFEA 95 (814)
T ss_dssp ------TTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTT---------------------CCEEEEEEC
T ss_pred ------CCceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEEEec
Confidence 444556777899999999999999 7999999999999999987 577788999
Q ss_pred CCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC-CCCCEEEEEeCCCcEEEEEC
Q 018235 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 228 h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~ 306 (359)
|...|.+++|+|+++ +|++|+.||.|++|++..+.... ..+.+|...|.+++|+| ++. +|++++.||.|++||+
T Consensus 96 ~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~---~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 96 HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALE---QTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSL 170 (814)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSEEE---EEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEET
T ss_pred CCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCceEE---EEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEEC
Confidence 999999999999998 99999999999999998743443 56788999999999999 566 9999999999999999
Q ss_pred CCCCCceEEeec-CCCCEEEEEEcC--CCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 307 RVGKSALTSFKA-HNADVNVISWNR--CWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 307 r~~~~~~~~~~~-h~~~V~~i~~s~--~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+.+ .+...+.. |...|++++|+| ++.+++.+.. ++.|++|+..++.
T Consensus 171 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 171 GQS-TPNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTKS 219 (814)
T ss_dssp TCS-SCSEEEECCCTTCCCEEEECCSTTCCEEEEECT----TSEEEEEETTTTE
T ss_pred CCC-cceeEEecCCCCCEEEEEEEECCCCCEEEEEeC----CCEEEEEECCCCc
Confidence 987 55566644 448899999999 8999888876 8899999988764
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.7e-22 Score=187.68 Aligned_cols=188 Identities=16% Similarity=0.221 Sum_probs=150.1
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccc--ccccccc--------------------------
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNA--LAESETI-------------------------- 208 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~--~~~~~~~-------------------------- 208 (359)
....+..|.+.|++++|+|++ .+|++++.+|.|++||+...... +......
T Consensus 141 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (425)
T 1r5m_A 141 LLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK 219 (425)
T ss_dssp EEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE
T ss_pred eeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE
Confidence 445667899999999999998 78999999999999999763211 0000000
Q ss_pred -ccCCCC-C-----CCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEE
Q 018235 209 -VGQGAP-Q-----VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281 (359)
Q Consensus 209 -~~~~~~-~-----~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~ 281 (359)
.....+ . .....++..+.+|...+.+++|+|++. +|++|+.||.|++||++. +... ..+.+|...|.+
T Consensus 220 ~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~---~~~~~~~~~i~~ 294 (425)
T 1r5m_A 220 FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGN-GNSQ---NCFYGHSQSIVS 294 (425)
T ss_dssp EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSS-BSCS---EEECCCSSCEEE
T ss_pred EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCC-Cccc---eEecCCCccEEE
Confidence 000000 0 023466778889999999999999998 999999999999999987 3333 567789999999
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 282 LQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 282 v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++|+|++ +|++++.|+.|++||++++ ..+..+..|...|++++|+|++.+++.+.. ++.|++|+...+.
T Consensus 295 ~~~~~~~--~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 295 ASWVGDD--KVISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFAGRISQDGQKYAVAFM----DGQVNVYDLKKLN 363 (425)
T ss_dssp EEEETTT--EEEEEETTSEEEEEETTTT-EEEEEEECTTCCEEEEEECTTSSEEEEEET----TSCEEEEECHHHH
T ss_pred EEECCCC--EEEEEeCCCcEEEEECCCC-cEeEecccCCccEEEEEEcCCCCEEEEEEC----CCeEEEEECCCCc
Confidence 9999988 8999999999999999987 777788899999999999999999998876 8889999987643
No 80
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=1e-21 Score=179.64 Aligned_cols=209 Identities=16% Similarity=0.229 Sum_probs=171.8
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
=+..++.|.|+.. .+|+.|. .++.|.||++....
T Consensus 39 ~~V~~v~~sp~~~----------~~l~S~s-----~D~~i~vWd~~~~~------------------------------- 72 (340)
T 4aow_A 39 GWVTQIATTPQFP----------DMILSAS-----RDKTIIMWKLTRDE------------------------------- 72 (340)
T ss_dssp SCEEEEEECTTCT----------TEEEEEE-----TTSCEEEEEECCSS-------------------------------
T ss_pred CCEEEEEEeCCCC----------CEEEEEc-----CCCeEEEEECCCCC-------------------------------
Confidence 4677888988731 3677776 47799999984100
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
.........+.+|.+.|++++|+|++ .++++++.||.|++|+... ........
T Consensus 73 -----~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~---------------------~~~~~~~~ 125 (340)
T 4aow_A 73 -----TNYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTT---------------------GTTTRRFV 125 (340)
T ss_dssp -----SCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEE
T ss_pred -----cccceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccccceEEeecc---------------------cceeeeec
Confidence 01334456778999999999999999 8999999999999999987 44556667
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCC-CEEEEEeCCCcEEEEE
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP-DVFASCSVDGHIAIWD 305 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-~~las~s~Dg~I~iwD 305 (359)
.+...+..+.+++.+. +|++|+.|+.+++||+....... ..+.+|...|..++|++++. .++++++.|+.|++||
T Consensus 126 ~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 126 GHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYT---VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp CCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEE---ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred CCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEE---EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 7788899999999998 99999999999999987633332 45678999999999998754 3789999999999999
Q ss_pred CCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 306 TRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 306 ~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+++. ..+..+.+|...|++|+|+|++.+|+.+.. |+.|++||.+++.
T Consensus 202 ~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 202 LANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGK----DGQAMLWDLNEGK 248 (340)
T ss_dssp TTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTE
T ss_pred CCCC-ceeeEecCCCCcEEEEEECCCCCEEEEEeC----CCeEEEEEeccCc
Confidence 9997 777888999999999999999999988876 8999999988764
No 81
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=1.4e-21 Score=176.97 Aligned_cols=204 Identities=18% Similarity=0.280 Sum_probs=161.5
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+. .+|+.|+ .++.|.||++.
T Consensus 67 ~~~V~~v~~~~~~-----------~~l~sgs-----~Dg~v~iw~~~--------------------------------- 97 (318)
T 4ggc_A 67 GEYISSVAWIKEG-----------NYLAVGT-----SSAEVQLWDVQ--------------------------------- 97 (318)
T ss_dssp TCCEEEEEECTTS-----------SEEEEEE-----TTSEEEEEETT---------------------------------
T ss_pred CCeEEEEEECCCC-----------CEEEEEE-----CCCcEEEeecC---------------------------------
Confidence 3456788888875 4788887 46789999873
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.........+|...+.++.+.+ .++++++.++.+++|+... ....+..+
T Consensus 98 --------~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~--------------------~~~~~~~~ 146 (318)
T 4ggc_A 98 --------QQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRV--------------------AEHHVATL 146 (318)
T ss_dssp --------TTEEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTS--------------------SSCEEEEE
T ss_pred --------CceeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCC--------------------CceeEEEE
Confidence 4455567789999998877654 6899999999999999887 35667788
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCcc----------------------------------
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNP---------------------------------- 271 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~---------------------------------- 271 (359)
.+|...+..+.|++.+. +|++|+.||+|++||++++.........
T Consensus 147 ~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 147 SGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp ECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred cCccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 99999999999999998 9999999999999999763210000000
Q ss_pred ----------ccCCCCCeEEEEecCCCCCEEEEE--eCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEe
Q 018235 272 ----------FIGHSASVEDLQWSPTEPDVFASC--SVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHL 339 (359)
Q Consensus 272 ----------~~~h~~~V~~v~~sp~~~~~las~--s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~ 339 (359)
...+...+..+.|+|.+. .++++ +.|+.|+|||++++ +++..+.+|...|++|+|+|++.+|+.+.
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~sg~~d~~i~iwd~~~~-~~~~~l~gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTT-EEEEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred Eecccccccccccceeeeeeeeeccccc-ceEEEEEcCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 112445677788888887 44443 47999999999998 78889999999999999999999999887
Q ss_pred eecccceEEEEEeCcCC
Q 018235 340 EVMMEHFLFMILDCSRG 356 (359)
Q Consensus 340 ~~~~~d~~i~iwd~~~g 356 (359)
. |+.|++|++...
T Consensus 304 ~----D~~v~iWd~~~~ 316 (318)
T 4ggc_A 304 A----DETLRLWRCFEL 316 (318)
T ss_dssp T----TTEEEEECCSCC
T ss_pred c----CCeEEEEECCCC
Confidence 6 999999998754
No 82
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=3e-22 Score=183.17 Aligned_cols=167 Identities=16% Similarity=0.223 Sum_probs=138.3
Q ss_pred EEEEEecCCCceeeEEEeCCC-CcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQN-PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~-~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
......+|...|+.++|++.+ ..++++++.|+.|++||+.. ..++..+.+|...|+++
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~---------------------~~~~~~~~~h~~~v~~~ 221 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---------------------CKLKTNHIGHTGYLNTV 221 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC---------------------CceeeEecCCCCcEEEE
Confidence 345566899999999999876 35789999999999999987 56778899999999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
+|+|++. +|++|+.||.|++||++. ...+ ..+. +...|.+++|+|++. +++++.|+.|+|||++.. ..+..
T Consensus 222 ~~s~~~~-~l~s~s~Dg~i~iwd~~~-~~~~---~~~~-~~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~-~~~~~ 292 (340)
T 4aow_A 222 TVSPDGS-LCASGGKDGQAMLWDLNE-GKHL---YTLD-GGDIINALCFSPNRY--WLCAATGPSIKIWDLEGK-IIVDE 292 (340)
T ss_dssp EECTTSS-EEEEEETTCEEEEEETTT-TEEE---EEEE-CSSCEEEEEECSSSS--EEEEEETTEEEEEETTTT-EEEEE
T ss_pred EECCCCC-EEEEEeCCCeEEEEEecc-Ccee---eeec-CCceEEeeecCCCCc--eeeccCCCEEEEEECCCC-eEEEe
Confidence 9999998 999999999999999987 4433 3344 457899999999875 556777999999999976 33333
Q ss_pred e---------ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 316 F---------KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 316 ~---------~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+ .+|...|++++|+|++++|+.+.. |+.|++|++++|+
T Consensus 293 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~----Dg~v~iW~~~tGt 339 (340)
T 4aow_A 293 LKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT----DNLVRVWQVTIGT 339 (340)
T ss_dssp ECCC-------CCCCCEEEEEECTTSSEEEEEET----TSCEEEEEEEC--
T ss_pred ccccceeeeccCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEeCCCcC
Confidence 2 478899999999999999998876 8999999999986
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.5e-22 Score=182.97 Aligned_cols=236 Identities=10% Similarity=0.084 Sum_probs=180.3
Q ss_pred CceeeeChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCC
Q 018235 47 GEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKP 126 (359)
Q Consensus 47 ~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~ 126 (359)
+....+|-.-...+..+...-+..++.|.|+. .++++++.......+.|.++++..-.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~----- 159 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCG-----------NYFLAILDNVMKNPGSINIYEIERDSATHELT----- 159 (369)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTS-----------SEEEEEECCBTTBCCEEEEEEEEECTTTCCEE-----
T ss_pred CeEEEEECCCCcEEEEeecCCCeEEEEEccCC-----------CEEEEecCCccCCCCEEEEEEecCCccceeec-----
Confidence 33444443333445555566777888888874 46777764433345799999985321111000
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCC--ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 018235 127 SNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQG--CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAE 204 (359)
Q Consensus 127 ~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~--~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~ 204 (359)
. ...........|.+ .|.+++|+|++ .++++++.+|.|++||+..
T Consensus 160 --------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~------- 206 (369)
T 3zwl_B 160 --------------------K-----VSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSN------- 206 (369)
T ss_dssp --------------------E-----ECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTT-------
T ss_pred --------------------c-----cccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCC-------
Confidence 0 01111134456777 99999999998 7899999999999999986
Q ss_pred ccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEe
Q 018235 205 SETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW 284 (359)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~ 284 (359)
...++..+..|...+.+++|+|++. +|++++.||.|++||+++ +... ..+. +...+..++|
T Consensus 207 -------------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~-~~~~---~~~~-~~~~~~~~~~ 267 (369)
T 3zwl_B 207 -------------NYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVST-LQVL---KKYE-TDCPLNTAVI 267 (369)
T ss_dssp -------------TTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-CCEE---EEEE-CSSCEEEEEE
T ss_pred -------------CcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEEECCC-Ccee---eeec-CCCCceeEEe
Confidence 2466778889999999999999998 999999999999999987 4433 3333 7889999999
Q ss_pred cCCCCCEEEEEeCCC--------------cEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEE
Q 018235 285 SPTEPDVFASCSVDG--------------HIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMI 350 (359)
Q Consensus 285 sp~~~~~las~s~Dg--------------~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~i 350 (359)
+|++. ++++++.++ .|++||++++ .++..+.+|...|++++|+|++.+|+.+.. ++.|++
T Consensus 268 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~----dg~v~i 341 (369)
T 3zwl_B 268 TPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIFE-EEIGRVQGHFGPLNTVAISPQGTSYASGGE----DGFIRL 341 (369)
T ss_dssp CSSSS-EEEEEECCC-------------CEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEE
T ss_pred cCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecCCC-cchhheecccCcEEEEEECCCCCEEEEEcC----CCeEEE
Confidence 99999 888888888 8999999998 788888999999999999999999998876 899999
Q ss_pred EeCcCC
Q 018235 351 LDCSRG 356 (359)
Q Consensus 351 wd~~~g 356 (359)
|+...+
T Consensus 342 w~~~~~ 347 (369)
T 3zwl_B 342 HHFEKS 347 (369)
T ss_dssp EEECHH
T ss_pred EECccc
Confidence 998754
No 84
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.5e-22 Score=206.41 Aligned_cols=207 Identities=17% Similarity=0.220 Sum_probs=169.3
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
=|..++.|-|+. .++++|+ .++.|.||++..
T Consensus 10 ~~V~~l~~s~dg-----------~~latg~-----~dg~I~vwd~~~--------------------------------- 40 (753)
T 3jro_A 10 ELIHDAVLDYYG-----------KRLATCS-----SDKTIKIFEVEG--------------------------------- 40 (753)
T ss_dssp CCEEEECCCSSS-----------CCEEEEE-----TTTEEEEEEEET---------------------------------
T ss_pred ceeEEEEECCCC-----------CeEEEEE-----CCCcEEEEecCC---------------------------------
Confidence 366777787874 4677776 467999999841
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCC--CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
........+.+|.+.|++++|+|. + .++++++.||.|++||+... ....+..
T Consensus 41 ------~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~-------------------~~~~~~~ 94 (753)
T 3jro_A 41 ------ETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENG-------------------RWSQIAV 94 (753)
T ss_dssp ------TEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETT-------------------EEEEEEE
T ss_pred ------CCCccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCC-------------------ccccccc
Confidence 133455677799999999999987 5 89999999999999998861 1125678
Q ss_pred ecCCCCceEEEEeCCC--CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC-------------CC
Q 018235 225 FGGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT-------------EP 289 (359)
Q Consensus 225 ~~~h~~~v~~l~~sp~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-------------~~ 289 (359)
+.+|...|++++|+|+ +. +|++|+.||.|++||++...... ...+.+|...|.+++|+|. +.
T Consensus 95 ~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~--~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~ 171 (753)
T 3jro_A 95 HAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR 171 (753)
T ss_dssp ECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC--CEEEECCSSCEEEEEECCCC---------CGGGC
T ss_pred ccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc--eeEeecCCCceEEEEecCcccccccccccCCCCC
Confidence 8899999999999999 76 99999999999999998743322 2456789999999999995 55
Q ss_pred CEEEEEeCCCcEEEEECCCCC---CceEEeecCCCCEEEEEEcCC---CCeEEEEeeecccceEEEEEeCcCC
Q 018235 290 DVFASCSVDGHIAIWDTRVGK---SALTSFKAHNADVNVISWNRC---WLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 290 ~~las~s~Dg~I~iwD~r~~~---~~~~~~~~h~~~V~~i~~s~~---~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
+|++|+.||.|++||++.+. .+...+.+|...|++++|+|+ +.+++.+.. ++.|++|+..++
T Consensus 172 -~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~----Dg~I~iwd~~~~ 239 (753)
T 3jro_A 172 -KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ----DRTCIIWTQDNE 239 (753)
T ss_dssp -CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES----SSCEEEEEESSS
T ss_pred -EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec----CCEEEEecCCCC
Confidence 99999999999999999863 234556889999999999999 888888776 899999998876
No 85
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.90 E-value=4e-22 Score=186.28 Aligned_cols=172 Identities=13% Similarity=0.075 Sum_probs=143.1
Q ss_pred CCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe--cCCCCc
Q 018235 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF--GGHKDE 231 (359)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~ 231 (359)
...+...+.+|.+.|++++|+|+++.++|+++.||.|+|||+.. ......+ .+|...
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~~~~~h~~~ 120 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV---------------------QNKTSFIQGMGPGDA 120 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS---------------------TTCEEEECCCSTTCB
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC---------------------cccceeeecCCcCCc
Confidence 44556778899999999999999877999999999999999987 3444444 379999
Q ss_pred eEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 232 GYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 232 v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
|.+++|+|.+..+|++|+.|+.|++||++. .. ........+|...|.+++|+|++. +|++|+.|+.|++||++. .
T Consensus 121 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~--~ 195 (383)
T 3ei3_B 121 ITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SV-IQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDG--H 195 (383)
T ss_dssp EEEEEEETTEEEEEEEEETTTEEEEEETTS-CE-EEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTS--C
T ss_pred eeEEEeCCCCCCEEEEEeCCCEEEEEECCC-Cc-eEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCC--C
Confidence 999999994333999999999999999975 32 211122234558899999999998 999999999999999953 6
Q ss_pred ceEEeecCCCCEEEEEEcCCCC-eEEEEeeecccceEEEEEeCcC
Q 018235 312 ALTSFKAHNADVNVISWNRCWL-AVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 312 ~~~~~~~h~~~V~~i~~s~~~~-~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
++..+..|...|++++|+|++. +++.+.. ++.|++||.++
T Consensus 196 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~ 236 (383)
T 3ei3_B 196 EIFKEKLHKAKVTHAEFNPRCDWLMATSSV----DATVKLWDLRN 236 (383)
T ss_dssp EEEEEECSSSCEEEEEECSSCTTEEEEEET----TSEEEEEEGGG
T ss_pred EEEEeccCCCcEEEEEECCCCCCEEEEEeC----CCEEEEEeCCC
Confidence 7888899999999999999999 6776655 89999999987
No 86
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3e-22 Score=207.67 Aligned_cols=202 Identities=11% Similarity=0.076 Sum_probs=163.0
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|-|+. .+|++|+ .++.|+||+..
T Consensus 17 ~~~V~~lafspdg-----------~~lAsgs-----~Dg~I~lw~~~--------------------------------- 47 (902)
T 2oaj_A 17 SSKPIAAAFDFTQ-----------NLLAIAT-----VTGEVHIYGQQ--------------------------------- 47 (902)
T ss_dssp SSCEEEEEEETTT-----------TEEEEEE-----TTSEEEEECST---------------------------------
T ss_pred CCCcEEEEECCCC-----------CEEEEEe-----CCCEEEEEeCC---------------------------------
Confidence 4456788888985 4788888 46789998652
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.... .....|.+.|++++|+| + .+|++++.|++|+|||+.. .+.+..+
T Consensus 48 --------~~~~-~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~~~---------------------~~~~~~~ 95 (902)
T 2oaj_A 48 --------QVEV-VIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVLSLYS---------------------QKVLTTV 95 (902)
T ss_dssp --------TCEE-EEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEEETTT---------------------CSEEEEE
T ss_pred --------CcEE-EEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEEECCC---------------------CcEEEEE
Confidence 1122 23346889999999999 7 5999999999999999987 4566666
Q ss_pred cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcce-ecC-------ccccCCCCCeEEEEecCCCCCEEEEEeC
Q 018235 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN-VDP-------NPFIGHSASVEDLQWSPTEPDVFASCSV 297 (359)
Q Consensus 226 ~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~-~~~-------~~~~~h~~~V~~v~~sp~~~~~las~s~ 297 (359)
. |...|++++|+|++. +|++|+.||.|++||++. +... ... ..+.+|...|.+|+|+|.+..+|++|+.
T Consensus 96 ~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~-~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~ 172 (902)
T 2oaj_A 96 F-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDR-DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE 172 (902)
T ss_dssp E-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTT-TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS
T ss_pred c-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCC-CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC
Confidence 5 667899999999998 999999999999999986 3321 000 2356899999999999976558999999
Q ss_pred CCcEEEEECCCCCCceEEeecC------------------CCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 298 DGHIAIWDTRVGKSALTSFKAH------------------NADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h------------------~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
||.| |||++++ .++..+..| ...|++++|+|++.+|+.+.. |+.|++||.++++
T Consensus 173 dg~v-lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~----Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 173 YVTL-TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE----DNSLVFWDANSGH 244 (902)
T ss_dssp SCEE-EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET----TCCEEEEETTTCC
T ss_pred CCcE-EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC----CCeEEEEECCCCc
Confidence 9999 9999987 666666554 577999999999999998876 9999999998765
No 87
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=7.1e-22 Score=184.92 Aligned_cols=224 Identities=13% Similarity=0.108 Sum_probs=165.5
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+..... ....+|++|+ .++.|.||++.....
T Consensus 62 ~~~v~~~~~~~~~~~~g----~~~~~l~s~~-----~dg~i~iw~~~~~~~----------------------------- 103 (397)
T 1sq9_A 62 KSGLHHVDVLQAIERDA----FELCLVATTS-----FSGDLLFYRITREDE----------------------------- 103 (397)
T ss_dssp TTCEEEEEEEEEEETTT----EEEEEEEEEE-----TTSCEEEEEEEECTT-----------------------------
T ss_pred CCcEEEEEEecccccCC----ccccEEEEEc-----CCCCEEEEEccCCcc-----------------------------
Confidence 44677888888710000 0014677776 467899999852100
Q ss_pred cccCCCCCCCeEEEEEecC-----CCceeeEEEe----CCCCcE-EEEEeCCCcEEEEECCCCccccccccccccCCCCC
Q 018235 146 DDEEGGSGTPILQLRKVAH-----QGCVNRIRAM----TQNPHI-CASWADTGHVQVWDLRSHLNALAESETIVGQGAPQ 215 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H-----~~~V~~i~~~----p~~~~~-lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (359)
........+..| .+.|++++|+ |++ .+ |++++.+|.|++||+........ ...
T Consensus 104 -------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~------- 166 (397)
T 1sq9_A 104 -------TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESN--SLT------- 166 (397)
T ss_dssp -------TCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHH--HTT-------
T ss_pred -------cccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccc--cce-------
Confidence 022334566678 5999999999 888 66 99999999999999976110000 000
Q ss_pred CCCCCCcEEe-------cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccC---C---CCCeEEE
Q 018235 216 VSNQSPLVKF-------GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG---H---SASVEDL 282 (359)
Q Consensus 216 ~~~~~~~~~~-------~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~---h---~~~V~~v 282 (359)
....+...+ ..|...+.+++|+|++ +|++|+.||.|++||+++ +... ..+.. | ...|.++
T Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~---~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 167 -LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST-LRPL---YNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp -TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT-TEEE---EEEECCC---CCCCCEEEE
T ss_pred -eeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC-Ccee---EEEeccccccccCCccceE
Confidence 001222255 4588899999999988 999999999999999987 4444 55667 8 9999999
Q ss_pred EecCCCCCEEEEEeCC---CcEEEEECCCCCCceEEeec-------------CCCCEEEEEEcCCCCeEEEEeeecccce
Q 018235 283 QWSPTEPDVFASCSVD---GHIAIWDTRVGKSALTSFKA-------------HNADVNVISWNRCWLAVCWHLEVMMEHF 346 (359)
Q Consensus 283 ~~sp~~~~~las~s~D---g~I~iwD~r~~~~~~~~~~~-------------h~~~V~~i~~s~~~~~l~~~~~~~~~d~ 346 (359)
+|+|++. +|++++.| |.|++||++++ .++..+.. |...|++++|+|++.+|+.+.. ++
T Consensus 240 ~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg 313 (397)
T 1sq9_A 240 KFSPQGS-LLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW----DG 313 (397)
T ss_dssp EECSSTT-EEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET----TS
T ss_pred EECCCCC-EEEEEecCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC----CC
Confidence 9999998 99999999 99999999987 77788887 9999999999999999988876 89
Q ss_pred EEEEEeCcCCc
Q 018235 347 LFMILDCSRGE 357 (359)
Q Consensus 347 ~i~iwd~~~g~ 357 (359)
.|++|+..+++
T Consensus 314 ~i~iwd~~~~~ 324 (397)
T 1sq9_A 314 KLRFWDVKTKE 324 (397)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEEcCCCc
Confidence 99999998765
No 88
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=4e-22 Score=183.80 Aligned_cols=197 Identities=17% Similarity=0.306 Sum_probs=156.0
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-+..++.|.|+... ..+|++|+ .++.|.||++..
T Consensus 39 ~~~v~~~~~~~~~~~--------g~~l~~~~-----~dg~i~iw~~~~-------------------------------- 73 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLP--------GNFLIAGS-----WANDVRCWEVQD-------------------------------- 73 (368)
T ss_dssp SSCEEEEEECCTTSS--------SEEEEEEE-----TTSEEEEEEECT--------------------------------
T ss_pred CCceEEEEEcCCCCC--------ceEEEEEC-----CCCcEEEEEcCC--------------------------------
Confidence 446778889887310 15788887 467899999831
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
....+...+.+|.+.|++++|+|++ .+|++++.||.|++||+.. ... ..+
T Consensus 74 -------~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~---------------------~~~-~~~ 123 (368)
T 3mmy_A 74 -------SGQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSS---------------------NQA-IQI 123 (368)
T ss_dssp -------TSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEE-EEE
T ss_pred -------CCceeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCC---------------------CCc-eee
Confidence 0223436677899999999999988 7999999999999999987 233 346
Q ss_pred cCCCCceEEEEe--CCCCCCeEEEEcCCCcEEEEecCCCCcce-------------------------------------
Q 018235 226 GGHKDEGYAIDW--NPITTGRLVTGDCNSCIYLWEPASDATWN------------------------------------- 266 (359)
Q Consensus 226 ~~h~~~v~~l~~--sp~~~~~l~sgs~dg~I~lwd~~~~~~~~------------------------------------- 266 (359)
.+|...+.+++| +|++. +|++|+.||.|++||+++.....
T Consensus 124 ~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 202 (368)
T 3mmy_A 124 AQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPS 202 (368)
T ss_dssp EECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCE
T ss_pred ccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccc
Confidence 679999999999 88887 89999999999999987532100
Q ss_pred -------------------------------------------------ecCccccCCCC------------CeEEEEec
Q 018235 267 -------------------------------------------------VDPNPFIGHSA------------SVEDLQWS 285 (359)
Q Consensus 267 -------------------------------------------------~~~~~~~~h~~------------~V~~v~~s 285 (359)
.....+.+|.. .|.+++|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 282 (368)
T 3mmy_A 203 EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFH 282 (368)
T ss_dssp EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEEC
T ss_pred hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEe
Confidence 00112234443 69999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEee
Q 018235 286 PTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 286 p~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
|++. +|++|+.||.|+|||++++ .++..+..|...|++++|+|++.+|+.+..
T Consensus 283 p~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 283 PVHG-TLATVGSDGRFSFWDKDAR-TKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp TTTC-CEEEEETTSCEEEEETTTT-EEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred cCCC-EEEEEccCCeEEEEECCCC-cEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 9998 9999999999999999987 778888999999999999999999998865
No 89
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=1.2e-21 Score=187.84 Aligned_cols=172 Identities=20% Similarity=0.260 Sum_probs=145.5
Q ss_pred CCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceE
Q 018235 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (359)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (359)
.......+.+|.+.|++++|+|++ ++++++.||+|++||+.. ...+..+.+|...|.
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~---------------------~~~~~~~~~h~~~v~ 207 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKK---------------------GCCTHVFEGHNSTVR 207 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEE
T ss_pred CCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCC---------------------CcEEEEECCCCCccE
Confidence 444556777999999999999877 899999999999999987 567788999999999
Q ss_pred EEEeCC--CCCCeEEEEcCCCcEEEEecCCCCccee-------------------cCccccCCCCCeEEEEecCCCCCEE
Q 018235 234 AIDWNP--ITTGRLVTGDCNSCIYLWEPASDATWNV-------------------DPNPFIGHSASVEDLQWSPTEPDVF 292 (359)
Q Consensus 234 ~l~~sp--~~~~~l~sgs~dg~I~lwd~~~~~~~~~-------------------~~~~~~~h~~~V~~v~~sp~~~~~l 292 (359)
+++|++ ++. +|++|+.||+|++||++....... ....+.+|...|.++ ++++. +|
T Consensus 208 ~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-~l 283 (464)
T 3v7d_B 208 CLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN-IV 283 (464)
T ss_dssp EEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT-EE
T ss_pred EEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC-EE
Confidence 999984 555 899999999999999987432100 013567888999887 45666 99
Q ss_pred EEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 293 ASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 293 as~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++|+.||.|++||++++ .++..+.+|...|.+++|+|++.+++.+.. ++.|++|+..++.
T Consensus 284 ~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~----dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQM-KCLYILSGHTDRIYSTIYDHERKRCISASM----DTTIRIWDLENGE 343 (464)
T ss_dssp EEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEEETTTTE
T ss_pred EEEeCCCeEEEEECCCC-cEEEEecCCCCCEEEEEEcCCCCEEEEEeC----CCcEEEEECCCCc
Confidence 99999999999999987 788888999999999999999999988876 8899999998765
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=7.9e-22 Score=201.72 Aligned_cols=204 Identities=19% Similarity=0.265 Sum_probs=171.0
Q ss_pred ccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (359)
Q Consensus 65 ~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~ 144 (359)
..-|..++.|.|+. .+|++|+ .++.|.||++.
T Consensus 54 ~~~~v~~~~~s~~~-----------~~l~~~~-----~dg~i~vw~~~-------------------------------- 85 (814)
T 3mkq_A 54 TETPVRAGKFIARK-----------NWIIVGS-----DDFRIRVFNYN-------------------------------- 85 (814)
T ss_dssp CSSCEEEEEEEGGG-----------TEEEEEE-----TTSEEEEEETT--------------------------------
T ss_pred CCCcEEEEEEeCCC-----------CEEEEEe-----CCCeEEEEECC--------------------------------
Confidence 35678899999985 4788887 36789999873
Q ss_pred CcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE
Q 018235 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
.......+.+|.+.|++++|+|++ .++++++.||.|++|++.. .......
T Consensus 86 ---------~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~--------------------~~~~~~~ 135 (814)
T 3mkq_A 86 ---------TGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWEN--------------------NWALEQT 135 (814)
T ss_dssp ---------TCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGG--------------------TSEEEEE
T ss_pred ---------CCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCC--------------------CceEEEE
Confidence 233445667899999999999999 7899999999999999986 2355678
Q ss_pred ecCCCCceEEEEeCC-CCCCeEEEEcCCCcEEEEecCCCCcceecCccccC-CCCCeEEEEecC--CCCCEEEEEeCCCc
Q 018235 225 FGGHKDEGYAIDWNP-ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSP--TEPDVFASCSVDGH 300 (359)
Q Consensus 225 ~~~h~~~v~~l~~sp-~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp--~~~~~las~s~Dg~ 300 (359)
+.+|...+.+++|+| ++. .|++|+.||.|++||++.. ... ..+.. |...|.+++|+| ++. +|++++.||.
T Consensus 136 ~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~-~~~---~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~ 209 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQS-TPN---FTLTTGQERGVNYVDYYPLPDKP-YMITASDDLT 209 (814)
T ss_dssp EECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCS-SCS---EEEECCCTTCCCEEEECCSTTCC-EEEEECTTSE
T ss_pred EcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC-cce---eEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCE
Confidence 889999999999999 665 9999999999999999763 322 23333 458999999999 777 9999999999
Q ss_pred EEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 301 IAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 301 I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|++||++++ .++..+..|...|.+++|+|++.+++.+.. ++.|++|+..++.
T Consensus 210 i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 210 IKIWDYQTK-SCVATLEGHMSNVSFAVFHPTLPIIISGSE----DGTLKIWNSSTYK 261 (814)
T ss_dssp EEEEETTTT-EEEEEEECCSSCEEEEEECSSSSEEEEEET----TSCEEEEETTTCS
T ss_pred EEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCc
Confidence 999999987 778888899999999999999999888876 8899999998765
No 91
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.2e-21 Score=180.92 Aligned_cols=168 Identities=7% Similarity=-0.007 Sum_probs=129.8
Q ss_pred EEEEEecCCCceeeEEEeC--CCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-CCCCceE
Q 018235 157 LQLRKVAHQGCVNRIRAMT--QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGY 233 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p--~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~ 233 (359)
+.....+|.+.|++++|+| .+ .++++++.||+|++||+.. ..++..+. .|...+.
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~---------------------~~~~~~~~~~~~~~i~ 174 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYED---------------------DSQYIVHSAKSDVEYS 174 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSS---------------------SCEEEEECCCSSCCCC
T ss_pred eEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCC---------------------CcEEEEEecCCCCceE
Confidence 3344457889999999999 88 8999999999999999987 34445453 3455899
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCc
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~ 312 (359)
+++|+|++. +|++|+.||.|++||++++.... ..+.+ |...|.+++|+|++. +|++++. +.|+|||+++. ..
T Consensus 175 ~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~---~~~~~~h~~~v~~l~fs~~g~-~l~s~~~-~~v~iwd~~~~-~~ 247 (343)
T 3lrv_A 175 SGVLHKDSL-LLALYSPDGILDVYNLSSPDQAS---SRFPVDEEAKIKEVKFADNGY-WMVVECD-QTVVCFDLRKD-VG 247 (343)
T ss_dssp EEEECTTSC-EEEEECTTSCEEEEESSCTTSCC---EECCCCTTSCEEEEEECTTSS-EEEEEES-SBEEEEETTSS-TT
T ss_pred EEEECCCCC-EEEEEcCCCEEEEEECCCCCCCc---cEEeccCCCCEEEEEEeCCCC-EEEEEeC-CeEEEEEcCCC-Cc
Confidence 999999998 99999999999999998843321 34666 999999999999998 9999994 59999999987 44
Q ss_pred eEEee---cCCCCEE--EEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 313 LTSFK---AHNADVN--VISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 313 ~~~~~---~h~~~V~--~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
+..+. .|...+. +++|+|++.+++.+... ++.+++|+...+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~---d~~i~v~~~~~~ 293 (343)
T 3lrv_A 248 TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNE---SNSLTIYKFDKK 293 (343)
T ss_dssp CBSSCCCBC-----CCEEEEECTTSSEEEEEETT---TTEEEEEEECTT
T ss_pred ceeecccccccccccceEEEECCCCCEEEEecCC---CCcEEEEEEccc
Confidence 43332 2444444 69999999999886542 667999987543
No 92
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=2.8e-21 Score=177.06 Aligned_cols=205 Identities=13% Similarity=0.075 Sum_probs=155.5
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
=+..++.|.|+. .+|++|+ .++.|.||++..-
T Consensus 12 ~~v~~~~~s~~~-----------~~l~~~~-----~d~~v~iw~~~~~-------------------------------- 43 (342)
T 1yfq_A 12 DYISDIKIIPSK-----------SLLLITS-----WDGSLTVYKFDIQ-------------------------------- 43 (342)
T ss_dssp SCEEEEEEEGGG-----------TEEEEEE-----TTSEEEEEEEETT--------------------------------
T ss_pred CcEEEEEEcCCC-----------CEEEEEc-----CCCeEEEEEeCCC--------------------------------
Confidence 356788899975 3677776 4679999998410
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCc-EEEEEeCCCcEEEEEC-CCCccccccccccccCCCCCCCCCCCcEE
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPH-ICASWADTGHVQVWDL-RSHLNALAESETIVGQGAPQVSNQSPLVK 224 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~-~lat~s~dg~V~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
...........|.+.|++++|+|++ . ++++++.+|.|++||+ .. .....
T Consensus 44 ------~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~----------------------~~~~~ 94 (342)
T 1yfq_A 44 ------AKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGS----------------------PSFQA 94 (342)
T ss_dssp ------TTEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSS----------------------SSEEE
T ss_pred ------CccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccC----------------------CceEe
Confidence 0112234556899999999999998 7 8999999999999999 65 12355
Q ss_pred ecC--CCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCC---------CC------------------------------
Q 018235 225 FGG--HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS---------DA------------------------------ 263 (359)
Q Consensus 225 ~~~--h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~---------~~------------------------------ 263 (359)
+.+ |...|.+++|+| +. +|++|+.|+.|++||++. ..
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 172 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQV 172 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEE
T ss_pred ccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeE
Confidence 666 777777777777 54 777777777777777653 11
Q ss_pred ----------cceecCccccCCCCCeEEEEecC-CCCCEEEEEeCCCcEEEEECCCC-----CCceEEeecCCC------
Q 018235 264 ----------TWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVG-----KSALTSFKAHNA------ 321 (359)
Q Consensus 264 ----------~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~-----~~~~~~~~~h~~------ 321 (359)
... ......|...|.+++|+| ++. +|++++.||.|+||+++.. ......+..|..
T Consensus 173 ~i~d~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (342)
T 1yfq_A 173 QWFRLPLCEDDNG--TIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249 (342)
T ss_dssp EEEESSCCTTCCC--EEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS
T ss_pred EEEECCccccccc--eeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccc
Confidence 000 012335778899999999 888 9999999999999999876 356777777765
Q ss_pred ---CEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 322 ---DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 322 ---~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.|++++|+|++.+|+.+.. ++.|++|+..++.
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~----dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGS----DGIISCWNLQTRK 284 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEET----TSCEEEEETTTTE
T ss_pred cceeEEEEEEcCCCCEEEEecC----CceEEEEcCccHh
Confidence 9999999999999988876 8899999998765
No 93
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1e-21 Score=181.26 Aligned_cols=165 Identities=9% Similarity=0.021 Sum_probs=130.2
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe-cCCCCceEEEEeCC--CC
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF-GGHKDEGYAIDWNP--IT 241 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp--~~ 241 (359)
.+.|+++.++|. +++++.|++|++|+........... ....+..+ .+|...|.+++|+| ++
T Consensus 76 ~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 139 (343)
T 3lrv_A 76 TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSK------------TNKVLREIEVDSANEIIYMYGHNEVNT 139 (343)
T ss_dssp EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETT------------TCCEEEEEECCCSSCEEEEECCC---C
T ss_pred cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecC------------CcceeEEeecCCCCCEEEEEcCCCCCC
Confidence 567888888885 8999999999999987522111100 12323333 36778999999999 88
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce-EEeec-
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL-TSFKA- 318 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~-~~~~~- 318 (359)
. +|++|+.||+|++||++++ ... ..+ ..|...|.+++|+|++. +||+|+.||.|+|||++++ ..+ ..+..
T Consensus 140 ~-~l~s~s~dg~i~~wd~~~~-~~~---~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~-~~~~~~~~~~ 212 (343)
T 3lrv_A 140 E-YFIWADNRGTIGFQSYEDD-SQY---IVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSP-DQASSRFPVD 212 (343)
T ss_dssp C-EEEEEETTCCEEEEESSSS-CEE---EEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCT-TSCCEECCCC
T ss_pred C-EEEEEeCCCcEEEEECCCC-cEE---EEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC-CCCccEEecc
Confidence 7 9999999999999999873 332 223 34566899999999998 9999999999999999998 544 67777
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 319 HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 319 h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|...|++++|+|++.+|+.+.. + .|++||.+++.
T Consensus 213 h~~~v~~l~fs~~g~~l~s~~~----~-~v~iwd~~~~~ 246 (343)
T 3lrv_A 213 EEAKIKEVKFADNGYWMVVECD----Q-TVVCFDLRKDV 246 (343)
T ss_dssp TTSCEEEEEECTTSSEEEEEES----S-BEEEEETTSST
T ss_pred CCCCEEEEEEeCCCCEEEEEeC----C-eEEEEEcCCCC
Confidence 9999999999999999988864 4 89999998865
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.89 E-value=8.2e-22 Score=183.98 Aligned_cols=163 Identities=6% Similarity=0.003 Sum_probs=128.9
Q ss_pred CCCceeeEEEeCCCCcE-EEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHI-CASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~-lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
+...+.+++|+|++..+ +|+++.|++|+|||+.. ..++..+. |..+|++|+|+|++.
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~---------------------~~~~~~~~-~~~~V~~v~fspdg~ 189 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD---------------------LTEKFEIE-TRGEVKDLHFSTDGK 189 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT---------------------TEEEEEEE-CSSCCCEEEECTTSS
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC---------------------CcEEEEeC-CCCceEEEEEccCCc
Confidence 34558899999999443 34566899999999987 45666664 677899999999998
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCC----cEEEEECCCCCC---ceEE
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG----HIAIWDTRVGKS---ALTS 315 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg----~I~iwD~r~~~~---~~~~ 315 (359)
+|++++. +.+++|+..++.... .....+|...|.+++|+|++. ++++++.|+ .+++|++..... ....
T Consensus 190 -~l~s~s~-~~~~~~~~~~~~~~~--~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~ 264 (365)
T 4h5i_A 190 -VVAYITG-SSLEVISTVTGSCIA--RKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ 264 (365)
T ss_dssp -EEEEECS-SCEEEEETTTCCEEE--EECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred -eEEeccc-eeEEEEEeccCccee--eeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeee
Confidence 9999984 456666666633322 134567899999999999999 899998887 688999887622 1334
Q ss_pred eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 316 FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 316 ~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+..|...|++++|+|+|++|+.+.. |+.|+|||..+++
T Consensus 265 ~~~~~~~V~~~~~Spdg~~lasgs~----D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 265 VTNRFKGITSMDVDMKGELAVLASN----DNSIALVKLKDLS 302 (365)
T ss_dssp EESSCSCEEEEEECTTSCEEEEEET----TSCEEEEETTTTE
T ss_pred ecCCCCCeEeEEECCCCCceEEEcC----CCEEEEEECCCCc
Confidence 6789999999999999999998876 8999999998875
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.2e-22 Score=201.83 Aligned_cols=212 Identities=19% Similarity=0.254 Sum_probs=169.7
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
.-|..++.|.|+.. ..+|++|+ .++.|.||++..
T Consensus 53 ~~~V~~l~~s~~~~---------~~~l~s~s-----~Dg~I~vwd~~~-------------------------------- 86 (753)
T 3jro_A 53 EGPVWRVDWAHPKF---------GTILASCS-----YDGKVLIWKEEN-------------------------------- 86 (753)
T ss_dssp SSCEEEEEECCTTS---------CSEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred cCceEEEEecCCCC---------CCEEEEEe-----CCCeEEEEECCC--------------------------------
Confidence 45778888887731 14777777 467899999841
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCC--CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcE
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (359)
..........+|.+.|++++|+|+ + .++++++.||.|++||+... ......
T Consensus 87 -------~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~-------------------~~~~~~ 139 (753)
T 3jro_A 87 -------GRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKEN-------------------GTTSPI 139 (753)
T ss_dssp -------TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSS-------------------SCCCCE
T ss_pred -------CcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecC-------------------CCccee
Confidence 122344666789999999999998 6 89999999999999999872 124456
Q ss_pred EecCCCCceEEEEeCCC-------------CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC---
Q 018235 224 KFGGHKDEGYAIDWNPI-------------TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--- 287 (359)
Q Consensus 224 ~~~~h~~~v~~l~~sp~-------------~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--- 287 (359)
.+.+|...+.+++|+|. +. +|++|+.||.|++||++...........+.+|...|.+++|+|+
T Consensus 140 ~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 218 (753)
T 3jro_A 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (753)
T ss_dssp EEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence 77899999999999995 65 99999999999999998744322223567889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCC----ceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 288 EPDVFASCSVDGHIAIWDTRVGKS----ALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 288 ~~~~las~s~Dg~I~iwD~r~~~~----~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
+. +|++|+.||.|+|||++.+.. .+.....|...|++++|+|++.+++.+.. ++.|++|+...+
T Consensus 219 ~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~----Dg~I~vwd~~~~ 286 (753)
T 3jro_A 219 RS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG----DNKVTLWKENLE 286 (753)
T ss_dssp SE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS----SSCEECCBCCSS
T ss_pred CC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC----CCEEEEEecCCC
Confidence 66 999999999999999998621 22233568899999999999999988876 889999998753
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=6.6e-21 Score=182.58 Aligned_cols=219 Identities=14% Similarity=0.145 Sum_probs=164.8
Q ss_pred ccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (359)
Q Consensus 65 ~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~ 144 (359)
..-+..++.|.|+. ++++|+ .++.|.||++.
T Consensus 161 h~~~V~~l~~~~~~------------~l~s~s-----~dg~i~vwd~~-------------------------------- 191 (464)
T 3v7d_B 161 HDGGVWALKYAHGG------------ILVSGS-----TDRTVRVWDIK-------------------------------- 191 (464)
T ss_dssp CSSCEEEEEECSTT------------EEEEEE-----TTSCEEEEETT--------------------------------
T ss_pred CCcCEEEEEEcCCC------------EEEEEe-----CCCCEEEEECC--------------------------------
Confidence 34566777776652 677776 46789999872
Q ss_pred CcccCCCCCCCeEEEEEecCCCceeeEEEeC--CCCcEEEEEeCCCcEEEEECCCCcccccccccc--ccCCCCCCCCCC
Q 018235 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMT--QNPHICASWADTGHVQVWDLRSHLNALAESETI--VGQGAPQVSNQS 220 (359)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p--~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~ 220 (359)
.......+.+|.+.|+++.|++ ++ .++++++.||.|++||+............. ............
T Consensus 192 ---------~~~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
T 3v7d_B 192 ---------KGCCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261 (464)
T ss_dssp ---------TTEEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred ---------CCcEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence 3345566778999999999995 44 799999999999999998732111000000 000000000112
Q ss_pred CcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCc
Q 018235 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH 300 (359)
Q Consensus 221 ~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~ 300 (359)
.+..+.+|...+.++. +++. +|++|+.||.|++||+++ +... ..+.+|...|.+++|+|++. .|++|+.||.
T Consensus 262 ~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~-~~~~---~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~ 333 (464)
T 3v7d_B 262 FVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQ-MKCL---YILSGHTDRIYSTIYDHERK-RCISASMDTT 333 (464)
T ss_dssp EEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTT-TEEE---EEECCCSSCEEEEEEETTTT-EEEEEETTSC
T ss_pred EEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCC-CcEE---EEecCCCCCEEEEEEcCCCC-EEEEEeCCCc
Confidence 3567889999998885 4565 999999999999999987 4444 56788999999999999998 9999999999
Q ss_pred EEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 301 IAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 301 I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|++||++++ .++..+.+|...|.+++|+ +.+++.+.. ++.|++|+..++.
T Consensus 334 i~vwd~~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~s~----dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 334 IRIWDLENG-ELMYTLQGHTALVGLLRLS--DKFLVSAAA----DGSIRGWDANDYS 383 (464)
T ss_dssp EEEEETTTT-EEEEEECCCSSCEEEEEEC--SSEEEEEET----TSEEEEEETTTCC
T ss_pred EEEEECCCC-cEEEEEeCCCCcEEEEEEc--CCEEEEEeC----CCcEEEEECCCCc
Confidence 999999997 7888899999999999998 467777765 8999999988754
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5.5e-21 Score=183.01 Aligned_cols=166 Identities=17% Similarity=0.155 Sum_probs=137.2
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCC-CcEEecCCCCceEEEEe
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS-PLVKFGGHKDEGYAIDW 237 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~l~~ 237 (359)
.....|...|++++|+|++ .+|++++.+|.|++|++.... ... +...+.+|...|++++|
T Consensus 143 ~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~------------------~~~~~~~~~~~h~~~v~~~~~ 203 (450)
T 2vdu_B 143 RKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDINSIP------------------EEKFTQEPILGHVSMLTDVHL 203 (450)
T ss_dssp EEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCC------------------CSSCCCCCSEECSSCEEEEEE
T ss_pred eecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecCCcc------------------cccccceeeecccCceEEEEE
Confidence 3334788999999999999 789999999999999997621 011 34467789999999999
Q ss_pred CCC---CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceE
Q 018235 238 NPI---TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314 (359)
Q Consensus 238 sp~---~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~ 314 (359)
+|+ +. +|++|+.|+.|++||+++ +.... ..+.+|...|.+++|+ ++. +|++|+.|+.|+|||++++ .++.
T Consensus 204 sp~~~~~~-~l~s~~~d~~i~vwd~~~-~~~~~--~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~-~~~~ 276 (450)
T 2vdu_B 204 IKDSDGHQ-FIITSDRDEHIKISHYPQ-CFIVD--KWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTG-KNLS 276 (450)
T ss_dssp EECTTSCE-EEEEEETTSCEEEEEESC-TTCEE--EECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTC-CEEE
T ss_pred cCCCCCCc-EEEEEcCCCcEEEEECCC-Cceee--eeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCC-cEee
Confidence 999 76 999999999999999987 34331 2256899999999999 887 9999999999999999997 6666
Q ss_pred Eee-------------------------cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 315 SFK-------------------------AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 315 ~~~-------------------------~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
.+. .+...|.+|+|+|++.+++.+... ++.|++|+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~---d~~i~iw~~ 337 (450)
T 2vdu_B 277 TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA---TKCIIILEM 337 (450)
T ss_dssp EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT---CSEEEEEEE
T ss_pred eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC---CCeEEEEEe
Confidence 664 234579999999999999988732 889999998
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5.8e-22 Score=188.48 Aligned_cols=215 Identities=14% Similarity=0.155 Sum_probs=158.4
Q ss_pred CcceeEEEEe-ccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 67 WPCLSFDIVR-DTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 67 wP~ls~~~~p-d~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
-+..++.|.| +. .+|+.|+ .++.|.||++..+.....
T Consensus 64 ~~V~~~~~s~~~~-----------~~l~s~s-----~dg~v~vwd~~~~~~~~~-------------------------- 101 (437)
T 3gre_A 64 NSITSSAVSPGET-----------PYLITGS-----DQGVIKIWNLKEIIVGEV-------------------------- 101 (437)
T ss_dssp SCEEEEEEECSSS-----------CEEEEEE-----TTSEEEEEEHHHHHTTCC--------------------------
T ss_pred CceEEEEECCCCC-----------CEEEEec-----CCceEEEeECcccccCcc--------------------------
Confidence 4677888988 64 4788887 577999999853210000
Q ss_pred cccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCc--cccccccccccCCCCCCCCCCCcE
Q 018235 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHL--NALAESETIVGQGAPQVSNQSPLV 223 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 223 (359)
..+.+ ...|.+.|++++|+|++ .+|++++.||.|++||+.... ...... ...++.
T Consensus 102 -------~~~~~---~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~------------~~~~i~ 158 (437)
T 3gre_A 102 -------YSSSL---TYDCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFL------------NCECIR 158 (437)
T ss_dssp -------CSCSE---EEECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEE------------EEEEEE
T ss_pred -------cceee---eccCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeecc------------ccceeE
Confidence 01122 23699999999999988 799999999999999995210 000000 001122
Q ss_pred Eec--C--CCCceEEEE--eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccC--CCCCeEEEEecCCCCCEEEEE
Q 018235 224 KFG--G--HKDEGYAID--WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG--HSASVEDLQWSPTEPDVFASC 295 (359)
Q Consensus 224 ~~~--~--h~~~v~~l~--~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~las~ 295 (359)
.+. . +...+.++. +++++. +|++|+.||.|++||+++ +... ..+.+ |...|.+++|+|++. +|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~~~---~~~~~~~h~~~v~~~~~s~~~~-~l~s~ 232 (437)
T 3gre_A 159 KINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRT-LERL---QIIENSPRHGAVSSICIDEECC-VLILG 232 (437)
T ss_dssp EEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTT-CCEE---EEEECCGGGCCEEEEEECTTSC-EEEEE
T ss_pred EEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCC-Ceee---EEEccCCCCCceEEEEECCCCC-EEEEE
Confidence 221 1 455667776 667787 999999999999999987 4444 45666 889999999999988 99999
Q ss_pred eCCCcEEEEECCCCCCceEEee-cCCCCEEEEEEcC----CCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 296 SVDGHIAIWDTRVGKSALTSFK-AHNADVNVISWNR----CWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 296 s~Dg~I~iwD~r~~~~~~~~~~-~h~~~V~~i~~s~----~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+.||.|+|||++.+ .++..+. .|...|++++|+| ++.+++.+.. ++.|++||.+++.
T Consensus 233 ~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~----dg~i~iwd~~~~~ 294 (437)
T 3gre_A 233 TTRGIIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS----KTFLTIWNFVKGH 294 (437)
T ss_dssp ETTSCEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST----TEEEEEEETTTTE
T ss_pred cCCCeEEEEEcCCc-cEEEEEecCCCCceEEEEeccccCCCccEEEEEcC----CCcEEEEEcCCCc
Confidence 99999999999997 7777774 7888999996665 5667777765 8999999998765
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=8.5e-21 Score=180.09 Aligned_cols=170 Identities=20% Similarity=0.314 Sum_probs=145.1
Q ss_pred EEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEe
Q 018235 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (359)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (359)
.....+|.+.|++|+|+|++ .+||+|+.||.|+|||+.. .+.+..+.+|...+.+++|
T Consensus 140 ~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~---------------------~~~~~~~~~h~~~v~~~s~ 197 (420)
T 4gga_A 140 LLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQ---------------------QKRLRNMTSHSARVGSLSW 197 (420)
T ss_dssp EEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEEEE
T ss_pred EEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCC---------------------CcEEEEEeCCCCceEEEee
Confidence 34556788999999999999 8999999999999999987 6778899999999999999
Q ss_pred CCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC---CceE
Q 018235 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK---SALT 314 (359)
Q Consensus 238 sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~---~~~~ 314 (359)
++ . +|++|+.|+.+++||.+...... ..+.+|...+..+.|+|.+. ++++++.|+.|+|||.+.+. ..+.
T Consensus 198 ~~--~-~l~sgs~d~~i~~~d~~~~~~~~---~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 198 NS--Y-ILSSGSRSGHIHHHDVRVAEHHV---ATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp ET--T-EEEEEETTSEEEEEETTSSSCEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSE
T ss_pred CC--C-EEEEEeCCCceeEeeecccceee---EEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeee
Confidence 64 3 99999999999999998744443 66889999999999999999 99999999999999998762 2455
Q ss_pred EeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 315 SFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 315 ~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
....|...|.+++|+|.+..++... .+..|+.|++||..++.
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~-~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATG-GGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEE-ECTTTCEEEEEETTTTE
T ss_pred eecccCCceeeeeeCCCcccEEEEE-eecCCCEEEEEeCCccc
Confidence 6688999999999999887655432 23458999999998875
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.89 E-value=1.4e-21 Score=192.96 Aligned_cols=176 Identities=15% Similarity=0.127 Sum_probs=147.4
Q ss_pred eEEEEEecCCCc-eeeEEEeC--CCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCce
Q 018235 156 ILQLRKVAHQGC-VNRIRAMT--QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEG 232 (359)
Q Consensus 156 ~~~~~~~~H~~~-V~~i~~~p--~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 232 (359)
.....+.+|.+. |++++|+| ++ .+||+++.||.|+|||+........ . ....+..+.+|...+
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~-~------------~~~~~~~~~~~~~~v 119 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESNS-V------------EVNVKSEFQVLAGPI 119 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGTE-E------------EEEEEEEEECCSSCE
T ss_pred ccceEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCccccc-c------------cccccchhhcccccE
Confidence 344667799999 99999999 88 8999999999999999964100000 0 024566788899999
Q ss_pred EEEEeCCCCCCeEEEEcCC----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCC
Q 018235 233 YAIDWNPITTGRLVTGDCN----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (359)
Q Consensus 233 ~~l~~sp~~~~~l~sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (359)
.+++|+|++. +|++++.+ +.|++||. +... ..+.+|...|.+++|+|++..+|++++.|+.|++||+++
T Consensus 120 ~~~~~s~~~~-~l~~~~~~~~~~~~v~~~d~---~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~ 192 (615)
T 1pgu_A 120 SDISWDFEGR-RLCVVGEGRDNFGVFISWDS---GNSL---GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP 192 (615)
T ss_dssp EEEEECTTSS-EEEEEECCSSCSEEEEETTT---CCEE---EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT
T ss_pred EEEEEeCCCC-EEEEeccCCCCccEEEEEEC---CCcc---eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC
Confidence 9999999998 99999887 78999983 3333 567899999999999999987899999999999999998
Q ss_pred CCCceEEeecCCC---CEEEEEEcCC-CCeEEEEeeecccceEEEEEeCcCCc
Q 018235 309 GKSALTSFKAHNA---DVNVISWNRC-WLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 309 ~~~~~~~~~~h~~---~V~~i~~s~~-~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
. ..+..+..|.. .|++++|+|+ +.+++.+.. ++.|++|+..++.
T Consensus 193 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 193 F-KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS----DRKISCFDGKSGE 240 (615)
T ss_dssp B-EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET----TCCEEEEETTTCC
T ss_pred c-ceeeeecccCCCCceEEEEEECCCCCCEEEEEeC----CCeEEEEECCCCC
Confidence 7 77788888999 9999999999 999888876 8899999988765
No 101
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.88 E-value=9.9e-21 Score=175.86 Aligned_cols=159 Identities=14% Similarity=0.211 Sum_probs=120.2
Q ss_pred ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE-----------
Q 018235 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI----------- 235 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l----------- 235 (359)
.+..+.+.+.+..++++++.+++|+|||+... +++..+. |...+.++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~---------------------~~~~~~~-~~~~v~~v~~~~~~~~~~~ 117 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK---------------------QDVSRIK-VDAPVKDLFLSREFIVVSY 117 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTT---------------------EEEEEEE-CSSCEEEEEECSSEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCC---------------------cEEEEEE-CCCceEEEEEcCCEEEEEE
Confidence 58888898888555577888899999998762 2222222 12233333
Q ss_pred --------------------------EeCCCCCCeEEE--EcCCCcEEEEecCCCCcc-----------eec-CccccCC
Q 018235 236 --------------------------DWNPITTGRLVT--GDCNSCIYLWEPASDATW-----------NVD-PNPFIGH 275 (359)
Q Consensus 236 --------------------------~~sp~~~~~l~s--gs~dg~I~lwd~~~~~~~-----------~~~-~~~~~~h 275 (359)
++++ . +++. |+.+|.|++||++.+..+ ..+ ...+.+|
T Consensus 118 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h 194 (355)
T 3vu4_A 118 GDVISVFKFGNPWKRITDDIRFGGVCEFSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH 194 (355)
T ss_dssp TTEEEEEESSTTCCBSSCCEEEEEEEEEET--T-EEEEEESSCTTCEEEEECCC------------------CCEEECCC
T ss_pred cCEEEEEECCCCceeeEEeccCCceEEEEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc
Confidence 3333 2 4554 688999999999863310 001 3568899
Q ss_pred CCCeEEEEecCCCCCEEEEEeCCCc-EEEEECCCCCCceEEee-c-CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEe
Q 018235 276 SASVEDLQWSPTEPDVFASCSVDGH-IAIWDTRVGKSALTSFK-A-HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILD 352 (359)
Q Consensus 276 ~~~V~~v~~sp~~~~~las~s~Dg~-I~iwD~r~~~~~~~~~~-~-h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd 352 (359)
...|.+++|+|++. +||+|+.|++ |+|||++++ .++..+. + |...|++++|+|++.+|+.+.. ++.|++|+
T Consensus 195 ~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~-~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~----d~~v~iw~ 268 (355)
T 3vu4_A 195 TNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDG-VLVREFRRGLDRADVVDMKWSTDGSKLAVVSD----KWTLHVFE 268 (355)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTC-CEEEEEECTTCCSCEEEEEECTTSCEEEEEET----TCEEEEEE
T ss_pred CCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCC-cEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC----CCEEEEEE
Confidence 99999999999998 9999999998 999999998 7778886 5 9999999999999999998876 89999999
Q ss_pred CcCC
Q 018235 353 CSRG 356 (359)
Q Consensus 353 ~~~g 356 (359)
...+
T Consensus 269 ~~~~ 272 (355)
T 3vu4_A 269 IFND 272 (355)
T ss_dssp SSCC
T ss_pred ccCC
Confidence 8765
No 102
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=2.6e-21 Score=177.97 Aligned_cols=172 Identities=14% Similarity=0.190 Sum_probs=139.9
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeC---CCcEEEEECCCCccccccccccccCCCCCCCCCCCc-EEecCCCCc
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWAD---TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL-VKFGGHKDE 231 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~---dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~ 231 (359)
.+.....+|.+.|++++|+|+++.++++++. ||.|+|||+.. .... ....+|...
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~---------------------~~~~~~~~~~~~~~ 67 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH---------------------GDLKLLREIEKAKP 67 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS---------------------SSEEEEEEEEESSC
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC---------------------CcccceeeecccCc
Confidence 4445667899999999999999778888887 99999999987 2222 223378899
Q ss_pred eEEEEeCCC---CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEe------cCCCCCEEEEEeCCCcEE
Q 018235 232 GYAIDWNPI---TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW------SPTEPDVFASCSVDGHIA 302 (359)
Q Consensus 232 v~~l~~sp~---~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~------sp~~~~~las~s~Dg~I~ 302 (359)
|.+++|+|+ +. +|++|+.||.|++||+....... ..+.+|...|.+++| +|++. +|++|+.||.|+
T Consensus 68 v~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~ 142 (357)
T 3i2n_A 68 IKCGTFGATSLQQR-YLATGDFGGNLHIWNLEAPEMPV---YSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVK 142 (357)
T ss_dssp EEEEECTTCCTTTC-CEEEEETTSCEEEECTTSCSSCS---EEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEE
T ss_pred EEEEEEcCCCCCCc-eEEEecCCCeEEEEeCCCCCccE---EEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEE
Confidence 999999999 45 99999999999999998743233 678899999999955 67787 999999999999
Q ss_pred EEECCCCCCceEEeecCCC----CEEEEE----EcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 303 IWDTRVGKSALTSFKAHNA----DVNVIS----WNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 303 iwD~r~~~~~~~~~~~h~~----~V~~i~----~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+||++.+..++..+..|.. .|++++ |+|++.+++.+.. ++.|++|+.+++.
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD----NGDIKLFDLRNMA 201 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET----TSEEEEEETTTTE
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc----CCeEEEEECccCc
Confidence 9999987446777766554 899998 7889999998876 8899999998765
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1e-20 Score=170.82 Aligned_cols=164 Identities=14% Similarity=0.174 Sum_probs=139.5
Q ss_pred EEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC-CCCceEEEE
Q 018235 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-HKDEGYAID 236 (359)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~ 236 (359)
...+..|.+.|.++.+.|....++++++.+|.|++||.. .+...+.. |...+.+++
T Consensus 135 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-----------------------~~~~~~~~~~~~~i~~~~ 191 (313)
T 3odt_A 135 VYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND-----------------------KVIKTFSGIHNDVVRHLA 191 (313)
T ss_dssp EEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-----------------------EEEEEECSSCSSCEEEEE
T ss_pred EEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC-----------------------ceEEEEeccCcccEEEEE
Confidence 355668999999999999444899999999999999933 34556666 888999999
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
|+|++. |++|+.||.|++||+++ ++.. ..+.+|...|.+++|+|++. |++++.||.|++||++++ .++..+
T Consensus 192 ~~~~~~--~~~~~~dg~i~i~d~~~-~~~~---~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~-~~~~~~ 262 (313)
T 3odt_A 192 VVDDGH--FISCSNDGLIKLVDMHT-GDVL---RTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENG-SLKQVI 262 (313)
T ss_dssp EEETTE--EEEEETTSEEEEEETTT-CCEE---EEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTC-CEEEEE
T ss_pred EcCCCe--EEEccCCCeEEEEECCc-hhhh---hhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCC-ceeEEE
Confidence 999875 88999999999999987 4444 56788999999999999984 889999999999999998 778888
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 317 KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 317 ~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
..|...|++++|+|++.+++ +.. ++.|++|+..++..
T Consensus 263 ~~~~~~i~~~~~~~~~~~~~-~~~----dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 263 TLPAISIWSVDCMSNGDIIV-GSS----DNLVRIFSQEKSRW 299 (313)
T ss_dssp ECSSSCEEEEEECTTSCEEE-EET----TSCEEEEESCGGGC
T ss_pred eccCceEEEEEEccCCCEEE-EeC----CCcEEEEeCCCCce
Confidence 99999999999999998554 444 88999999987653
No 104
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.88 E-value=1.6e-21 Score=179.84 Aligned_cols=124 Identities=15% Similarity=0.314 Sum_probs=107.6
Q ss_pred EEEecCCCceeeEEEeCCC--CcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCC-cEEecCCCCceEEE
Q 018235 159 LRKVAHQGCVNRIRAMTQN--PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP-LVKFGGHKDEGYAI 235 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~--~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l 235 (359)
..+.+|.+.|++++|+|++ ..+|++++.||.|+|||+... ... ...+.+|...|.++
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~--------------------~~~~~~~~~~h~~~v~~~ 92 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS--------------------GQTIPKAQQMHTGPVLDV 92 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT--------------------SCEEEEEEEECSSCEEEE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC--------------------CceeEEEeccccCCEEEE
Confidence 4567899999999999984 389999999999999999861 233 36788999999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEe--cCCCCCEEEEEeCCCcEEEEECCCC
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW--SPTEPDVFASCSVDGHIAIWDTRVG 309 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~--sp~~~~~las~s~Dg~I~iwD~r~~ 309 (359)
+|+|++. +|++|+.||.|++||+++ +... .+.+|...|.+++| +|++. +|++++.||.|++||++++
T Consensus 93 ~~~~~~~-~l~s~~~dg~v~iwd~~~-~~~~----~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 93 CWSDDGS-KVFTASCDKTAKMWDLSS-NQAI----QIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTT-TEEE----EEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCS
T ss_pred EECcCCC-EEEEEcCCCcEEEEEcCC-CCce----eeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCC
Confidence 9999998 999999999999999987 4433 35679999999999 88887 9999999999999999875
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.88 E-value=3e-21 Score=206.53 Aligned_cols=167 Identities=16% Similarity=0.189 Sum_probs=150.9
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
..+.+|.+.|++++|+|++ .++|+|+.||+|+|||+.. ...+..+.+|...|.+++|+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~---------------------~~~~~~~~~h~~~v~~~~~s 666 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAET---------------------GEKLLDIKAHEDEVLCCAFS 666 (1249)
T ss_dssp EEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEEEEEEC
T ss_pred EEEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCC---------------------CCEEEEeccCCCCEEEEEEe
Confidence 4667999999999999999 7999999999999999987 67788999999999999999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCC-CCEEEEEeCCCcEEEEECCCCCCceEEee
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE-PDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (359)
|++. +|++|+.||+|++||+.+ +... ..+.+|...|.+++|+|.+ ..++++|+.|+.|++||++++ .++..+.
T Consensus 667 ~~~~-~l~s~~~d~~v~vwd~~~-~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~ 740 (1249)
T 3sfz_A 667 SDDS-YIATCSADKKVKIWDSAT-GKLV---HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-ECRNTMF 740 (1249)
T ss_dssp TTSS-EEEEEETTSEEEEEETTT-CCEE---EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-SEEEEEC
T ss_pred cCCC-EEEEEeCCCeEEEEECCC-CceE---EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc-chhheec
Confidence 9998 999999999999999987 5544 6788999999999999952 238999999999999999998 7788889
Q ss_pred cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 318 AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 318 ~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+|...|++++|+|++.+++.+.. ++.|++|+..++.
T Consensus 741 ~h~~~v~~~~~sp~~~~l~s~s~----dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 741 GHTNSVNHCRFSPDDELLASCSA----DGTLRLWDVRSAN 776 (1249)
T ss_dssp CCSSCEEEEEECSSTTEEEEEES----SSEEEEEEGGGTE
T ss_pred CCCCCEEEEEEecCCCEEEEEEC----CCeEEEEeCCCCc
Confidence 99999999999999999998876 8999999987763
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.88 E-value=4.8e-21 Score=204.90 Aligned_cols=202 Identities=19% Similarity=0.297 Sum_probs=164.7
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.|.|++ .++++|+ .++.|.||++.
T Consensus 616 ~~v~~~~~s~~~-----------~~l~s~~-----~d~~i~vw~~~---------------------------------- 645 (1249)
T 3sfz_A 616 DAVYHACFSQDG-----------QRIASCG-----ADKTLQVFKAE---------------------------------- 645 (1249)
T ss_dssp SCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT----------------------------------
T ss_pred ccEEEEEECCCC-----------CEEEEEe-----CCCeEEEEECC----------------------------------
Confidence 445667777774 4677776 46789999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
.......+.+|.+.|++++|+|++ .++|+++.||.|+|||+.. .+++..+.
T Consensus 646 -------~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~---------------------~~~~~~~~ 696 (1249)
T 3sfz_A 646 -------TGEKLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSAT---------------------GKLVHTYD 696 (1249)
T ss_dssp -------TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------CCEEEEEE
T ss_pred -------CCCEEEEeccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCC---------------------CceEEEEc
Confidence 333445667999999999999999 8999999999999999987 67788999
Q ss_pred CCCCceEEEEeCCCCC-CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEE
Q 018235 227 GHKDEGYAIDWNPITT-GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~-~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (359)
+|...+.+++|+|.+. .++++|+.||.|++||+++ +... ..+.+|...|.+++|+|++. +|++|+.||.|++||
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~~~~---~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-KECR---NTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWD 771 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-SSEE---EEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEE
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-cchh---heecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEe
Confidence 9999999999999533 2889999999999999987 4444 56789999999999999999 999999999999999
Q ss_pred CCCCCCceEEe-------------------------------------------------------ecCCCCEEEEEEcC
Q 018235 306 TRVGKSALTSF-------------------------------------------------------KAHNADVNVISWNR 330 (359)
Q Consensus 306 ~r~~~~~~~~~-------------------------------------------------------~~h~~~V~~i~~s~ 330 (359)
++++ .....+ .+|...|.+++|+|
T Consensus 772 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 772 VRSA-NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp GGGT-EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred CCCC-cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 8765 221111 26777888888999
Q ss_pred CCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 331 CWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 331 ~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++.+++.+.. ++.+++|+..++.
T Consensus 851 ~~~~l~~~~~----dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 851 YDHLAVIALS----QYCVELWNIDSRL 873 (1249)
T ss_dssp STTEEEEECS----SSCEEEEETTTTE
T ss_pred CCCEEEEEeC----CCeEEEEEcCCCc
Confidence 8888887766 7889999887654
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.7e-20 Score=167.10 Aligned_cols=197 Identities=15% Similarity=0.184 Sum_probs=158.1
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..++.| |+. .+|++|+ .++.|.||++.
T Consensus 19 ~~v~~~~~-~~~-----------~~l~s~~-----~dg~v~vw~~~---------------------------------- 47 (313)
T 3odt_A 19 QDVRDVVA-VDD-----------SKVASVS-----RDGTVRLWSKD---------------------------------- 47 (313)
T ss_dssp SCEEEEEE-EET-----------TEEEEEE-----TTSEEEEEEES----------------------------------
T ss_pred CCcEEEEe-cCC-----------CEEEEEE-----cCCcEEEEECC----------------------------------
Confidence 35566777 764 3677777 46799999983
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (359)
..........|.+.|++++|+|++ .++++++.+|.|++|++.... ...++..+.
T Consensus 48 -------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~------------------~~~~~~~~~ 101 (313)
T 3odt_A 48 -------DQWLGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATS------------------GEDPLYTLI 101 (313)
T ss_dssp -------SSEEEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCT------------------TSCC-CEEC
T ss_pred -------CCEEEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecC------------------CCCcccchh
Confidence 334556677899999999999998 899999999999999997621 235677889
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
+|...+.+++| ++. +|++|+.||.|++||. .... ..+..|...|.+++|+|....+|++++.||.|++||.
T Consensus 102 ~~~~~i~~~~~--~~~-~l~~~~~d~~i~~~d~---~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~ 172 (313)
T 3odt_A 102 GHQGNVCSLSF--QDG-VVISGSWDKTAKVWKE---GSLV---YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN 172 (313)
T ss_dssp CCSSCEEEEEE--ETT-EEEEEETTSEEEEEET---TEEE---EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred hcccCEEEEEe--cCC-EEEEEeCCCCEEEEcC---CcEE---EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec
Confidence 99999999999 344 9999999999999992 3333 5677899999999999943349999999999999994
Q ss_pred CCCCCceEEeec-CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 307 RVGKSALTSFKA-HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 307 r~~~~~~~~~~~-h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+ .....+.. |...|.+++|+|++. ++.+.. ++.|++|+.++++
T Consensus 173 ~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~----dg~i~i~d~~~~~ 216 (313)
T 3odt_A 173 D---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSN----DGLIKLVDMHTGD 216 (313)
T ss_dssp T---EEEEEECSSCSSCEEEEEEEETTE-EEEEET----TSEEEEEETTTCC
T ss_pred C---ceEEEEeccCcccEEEEEEcCCCe-EEEccC----CCeEEEEECCchh
Confidence 3 45566655 999999999999998 555554 8899999998765
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.5e-21 Score=185.72 Aligned_cols=165 Identities=13% Similarity=0.147 Sum_probs=130.2
Q ss_pred EEEEEec--CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-CCCCceE
Q 018235 157 LQLRKVA--HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGY 233 (359)
Q Consensus 157 ~~~~~~~--H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~ 233 (359)
....+.. |.+.|++++|+|++ .+|++++.||.|++||++. ..++..+. .|...|.
T Consensus 204 ~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 204 RLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRF---------------------NVLIRSWSFGDHAPIT 261 (437)
T ss_dssp EEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTT---------------------TEEEEEEBCTTCEEEE
T ss_pred eeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCC---------------------ccEEEEEecCCCCceE
Confidence 3344445 89999999999998 8999999999999999987 56667765 7778999
Q ss_pred EEEeCC----CCCCeEEEEcCCCcEEEEecCCCCcceecCc---------------------cccC--CCCCeEEEEecC
Q 018235 234 AIDWNP----ITTGRLVTGDCNSCIYLWEPASDATWNVDPN---------------------PFIG--HSASVEDLQWSP 286 (359)
Q Consensus 234 ~l~~sp----~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~---------------------~~~~--h~~~V~~v~~sp 286 (359)
+++|+| ++. +|++|+.||.|++||++++ ....... .+.+ |...|.+++|+
T Consensus 262 ~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~- 338 (437)
T 3gre_A 262 HVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVKG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS- 338 (437)
T ss_dssp EEEECTTTCTTEE-EEEEESTTEEEEEEETTTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-
T ss_pred EEEeccccCCCcc-EEEEEcCCCcEEEEEcCCC-cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-
Confidence 997765 455 8999999999999999863 2210000 1233 77789999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCceEEeec-------------------------------------CCCCEEEEEEc
Q 018235 287 TEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-------------------------------------HNADVNVISWN 329 (359)
Q Consensus 287 ~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~-------------------------------------h~~~V~~i~~s 329 (359)
.+. +|++|+.||.|++||++++ ..+..+.. |...|++|+|+
T Consensus 339 ~~~-~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~ 416 (437)
T 3gre_A 339 NDK-ILLTDEATSSIVMFSLNEL-SSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTC 416 (437)
T ss_dssp TTE-EEEEEGGGTEEEEEETTCG-GGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEE
T ss_pred Cce-EEEecCCCCeEEEEECCCc-ccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeee
Confidence 555 9999999999999999987 55555543 89999999999
Q ss_pred CC--CCeEEEEeeecccceEEEEEe
Q 018235 330 RC--WLAVCWHLEVMMEHFLFMILD 352 (359)
Q Consensus 330 ~~--~~~l~~~~~~~~~d~~i~iwd 352 (359)
++ +.+|+.+.. ++.|++|+
T Consensus 417 ~~~~~~~l~s~~~----dG~I~iw~ 437 (437)
T 3gre_A 417 EVDETPLLVACDN----SGLIGIFQ 437 (437)
T ss_dssp ESSSSEEEEEEET----TSCEEEEC
T ss_pred ccCCceEEEEEcC----CceEEEeC
Confidence 98 667777766 89999995
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=1.5e-20 Score=185.74 Aligned_cols=207 Identities=13% Similarity=0.138 Sum_probs=168.1
Q ss_pred Cc-ceeEEEEe--ccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 67 WP-CLSFDIVR--DTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDED 143 (359)
Q Consensus 67 wP-~ls~~~~p--d~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d 143 (359)
-+ ..++.|.| +. .+|++|. .++.|.||++..-.....
T Consensus 64 ~~~v~~~~~sp~~~~-----------~~l~s~~-----~dg~v~vw~~~~~~~~~~------------------------ 103 (615)
T 1pgu_A 64 SSVVTTVKFSPIKGS-----------QYLCSGD-----ESGKVIVWGWTFDKESNS------------------------ 103 (615)
T ss_dssp TSCEEEEEECSSTTC-----------CEEEEEE-----TTSEEEEEEEEEEGGGTE------------------------
T ss_pred CceEEEEEECcCCCC-----------CEEEEec-----CCCEEEEEeCCCCccccc------------------------
Confidence 44 66788888 74 4777777 367899999942100000
Q ss_pred CCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCC----CcEEEEECCCCccccccccccccCCCCCCCCC
Q 018235 144 SDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219 (359)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (359)
....+...+..|.+.|++++|+|++ .++++++.+ +.|++||. .
T Consensus 104 ---------~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d~-----------------------~ 150 (615)
T 1pgu_A 104 ---------VEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDS-----------------------G 150 (615)
T ss_dssp ---------EEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTT-----------------------C
T ss_pred ---------ccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEEC-----------------------C
Confidence 0234446667899999999999999 678888877 78888882 3
Q ss_pred CCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCC---CeEEEEecCC-CCCEEEEE
Q 018235 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA---SVEDLQWSPT-EPDVFASC 295 (359)
Q Consensus 220 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~---~V~~v~~sp~-~~~~las~ 295 (359)
.++..+.+|...+++++|+|++..+|++|+.|+.|++||+.. .... ..+.+|.. .|.+++|+|+ +. +|+++
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-~~~~---~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~ 225 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-FKFS---ASDRTHHKQGSFVRDVEFSPDSGE-FVITV 225 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT-BEEE---EEECSSSCTTCCEEEEEECSTTCC-EEEEE
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-ccee---eeecccCCCCceEEEEEECCCCCC-EEEEE
Confidence 456788899999999999999976899999999999999876 4444 56778998 9999999999 77 99999
Q ss_pred eCCCcEEEEECCCCCCceEEe-e---cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 296 SVDGHIAIWDTRVGKSALTSF-K---AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 296 s~Dg~I~iwD~r~~~~~~~~~-~---~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+.||.|++||++++ +.+..+ . .|...|++++|+ ++.+++.+.. ++.|++|+..++.
T Consensus 226 ~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~----d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 226 GSDRKISCFDGKSG-EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA----DATIRVWDVTTSK 285 (615)
T ss_dssp ETTCCEEEEETTTC-CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET----TSEEEEEETTTTE
T ss_pred eCCCeEEEEECCCC-CEeEEecccccccCCceEEEEEc-CCCEEEEEcC----CCcEEEEECCCCc
Confidence 99999999999987 677777 5 899999999999 9998888876 8899999998765
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=2.7e-20 Score=175.31 Aligned_cols=219 Identities=11% Similarity=0.009 Sum_probs=138.4
Q ss_pred CcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018235 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (359)
Q Consensus 67 wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~ 146 (359)
-+..+++|.|....... ....+|+.|. .++.|+||++.
T Consensus 137 ~~v~~v~~~p~~~~~~~---~d~~~las~s-----~D~tv~~Wd~~---------------------------------- 174 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNR---LAEQVIASVG-----DDCTLIIWRLT---------------------------------- 174 (393)
T ss_dssp SCEEEEEEEEEECTTCS---EEEEEEEEEE-----TTSEEEEEEEE----------------------------------
T ss_pred CceEEEEEccccccccC---CCCCEEEEEE-----CCCeEEEEECC----------------------------------
Confidence 45678888874321110 0135777776 57899999984
Q ss_pred ccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCC----CCCCCCCc
Q 018235 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAP----QVSNQSPL 222 (359)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 222 (359)
.........+|.+.|.+++|+|.++.+|++++.||+|++||+..................- ........
T Consensus 175 -------~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 175 -------DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp -------TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred -------CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 3334466778999999999999987799999999999999998743211111000000000 00001122
Q ss_pred EEecCCCCceEEEEeC-CCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEE------------------E
Q 018235 223 VKFGGHKDEGYAIDWN-PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDL------------------Q 283 (359)
Q Consensus 223 ~~~~~h~~~v~~l~~s-p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v------------------~ 283 (359)
....+|...+.++.|+ +++. +|++++.|++|++||+... ... ..+..|...+..+ .
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~-~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFAN-NDY---NEISDSTMKLGPKNLLPNVQGISLFPSLLGAC 322 (393)
T ss_dssp ----CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-----------------------CCSCSEEEECSSCCSSCCE
T ss_pred eecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccC-CCC---ceEeeecCccccEEEccccccccccCcceeEE
Confidence 3446788899999987 6777 9999999999999999763 221 2233333333322 3
Q ss_pred ecC-CCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEee
Q 018235 284 WSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 284 ~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
|+| .+..++++|+.||+|+|||+.++ .++..+..|..+|++++|+|+|++|+.+..
T Consensus 323 ~~~~~~~~~~~sgs~Dg~V~lwd~~~~-~~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGLIQLINTYEK-DSNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp ECSSCTTEEEEEETTTTEEEEEETTCT-TCCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred EccCCCCEEEEEECCCCEEEEEECCCC-cEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 333 33436677889999999999987 667777789999999999999999998864
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=3.1e-20 Score=176.93 Aligned_cols=164 Identities=19% Similarity=0.290 Sum_probs=139.3
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
.....+.+|.+.|+++.| ++ .++++|+.||.|++||+.. ...+..+.+|...+.++
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~---------------------~~~~~~~~~h~~~v~~l 219 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNT---------------------GEMLNTLIHHCEAVLHL 219 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSS---------------------CCEEEEECCCCSCEEEE
T ss_pred eEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCC---------------------CcEEEEEcCCCCcEEEE
Confidence 344667789999999999 44 7999999999999999987 57788899999999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
+|++ ++|++|+.||.|++||++.... ......+.+|...|.+++| ++. +|++|+.||.|++||++++ ..+..
T Consensus 220 ~~~~---~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~~dg~i~vwd~~~~-~~~~~ 291 (435)
T 1p22_A 220 RFNN---GMMVTCSKDRSIAVWDMASPTD-ITLRRVLVGHRAAVNVVDF--DDK-YIVSASGDRTIKVWNTSTC-EFVRT 291 (435)
T ss_dssp ECCT---TEEEEEETTSCEEEEECSSSSC-CEEEEEECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEETTTC-CEEEE
T ss_pred EEcC---CEEEEeeCCCcEEEEeCCCCCC-ceeeeEecCCCCcEEEEEe--CCC-EEEEEeCCCeEEEEECCcC-cEEEE
Confidence 9974 3999999999999999987432 2112457789999999999 455 9999999999999999998 78888
Q ss_pred eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 316 FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 316 ~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+..|...|.+++|+ +.+++.+.. ++.|++||.+++.
T Consensus 292 ~~~~~~~v~~~~~~--~~~l~~g~~----dg~i~iwd~~~~~ 327 (435)
T 1p22_A 292 LNGHKRGIACLQYR--DRLVVSGSS----DNTIRLWDIECGA 327 (435)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEET----TSCEEEEETTTCC
T ss_pred EcCCCCcEEEEEeC--CCEEEEEeC----CCeEEEEECCCCC
Confidence 89999999999995 567777765 8899999998775
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.86 E-value=5.5e-21 Score=180.08 Aligned_cols=172 Identities=14% Similarity=0.230 Sum_probs=118.1
Q ss_pred EEecCCCceeeEEEeC--------CCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCc
Q 018235 160 RKVAHQGCVNRIRAMT--------QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDE 231 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p--------~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 231 (359)
.+.+|.+.|++++|+| ++ ++|||++.|++|+|||+.. ..++..+.+|...
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~---------------------~~~~~~~~~~~~~ 188 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTD---------------------EGPILAGYPLSSP 188 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEET---------------------TEEEEEEEECSSC
T ss_pred ccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCC---------------------CceeeeecCCCCC
Confidence 4568999999999998 45 7999999999999999976 4566677788899
Q ss_pred eEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCccee---------------------cCccccCCCCCeEEEEec-CCCC
Q 018235 232 GYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV---------------------DPNPFIGHSASVEDLQWS-PTEP 289 (359)
Q Consensus 232 v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~---------------------~~~~~~~h~~~V~~v~~s-p~~~ 289 (359)
+.+++|+|.+..+|++|+.||+|++||++++..... ......+|...|.++.|+ |++.
T Consensus 189 v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~ 268 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS 268 (393)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTC
T ss_pred cEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCC
Confidence 999999999865899999999999999987421110 011234688899999997 6777
Q ss_pred CEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCC-------------------CCeEEEEeeecccceEEEE
Q 018235 290 DVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRC-------------------WLAVCWHLEVMMEHFLFMI 350 (359)
Q Consensus 290 ~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~-------------------~~~l~~~~~~~~~d~~i~i 350 (359)
.|++++.|+++++||++.+ .....+..|...+..+.+.|+ +..++.... .++.|++
T Consensus 269 -~l~s~s~d~~i~vwd~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs---~Dg~V~l 343 (393)
T 4gq1_A 269 -GILAMCKSGAWLRWNLFAN-NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS---QHGLIQL 343 (393)
T ss_dssp -EEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET---TTTEEEE
T ss_pred -EEEEEeCCCCEEEEECccC-CCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC---CCCEEEE
Confidence 9999999999999999886 444445555554544444432 333333322 3899999
Q ss_pred EeCcCCcc
Q 018235 351 LDCSRGEI 358 (359)
Q Consensus 351 wd~~~g~v 358 (359)
|+..++..
T Consensus 344 wd~~~~~~ 351 (393)
T 4gq1_A 344 INTYEKDS 351 (393)
T ss_dssp EETTCTTC
T ss_pred EECCCCcE
Confidence 99988753
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.85 E-value=7.3e-20 Score=174.37 Aligned_cols=163 Identities=18% Similarity=0.288 Sum_probs=136.8
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
.....+.+|.+.|.++.|++ .++++++.||.|++||+.... .......+.+|...+.++
T Consensus 204 ~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~------------------~~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPT------------------DITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSS------------------CCEEEEEECCCSSCEEEE
T ss_pred cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCC------------------CceeeeEecCCCCcEEEE
Confidence 44566778999999999974 589999999999999998721 011226788999999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
+| ++. +|++|+.||.|++||+++ +... ..+.+|...|.+++|+ +. ++++|+.||.|++||++++ .++..
T Consensus 263 ~~--~~~-~l~s~~~dg~i~vwd~~~-~~~~---~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~-~~~~~ 331 (435)
T 1p22_A 263 DF--DDK-YIVSASGDRTIKVWNTST-CEFV---RTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECG-ACLRV 331 (435)
T ss_dssp EE--ETT-EEEEEETTSEEEEEETTT-CCEE---EEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTC-CEEEE
T ss_pred Ee--CCC-EEEEEeCCCeEEEEECCc-CcEE---EEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCC-CEEEE
Confidence 99 455 999999999999999987 4444 5788999999999995 44 9999999999999999998 78888
Q ss_pred eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 316 FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 316 ~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
+.+|...|++++| ++.+++.+.. ++.|++|+...+
T Consensus 332 ~~~h~~~v~~~~~--~~~~l~sg~~----dg~i~vwd~~~~ 366 (435)
T 1p22_A 332 LEGHEELVRCIRF--DNKRIVSGAY----DGKIKVWDLVAA 366 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEET----TSCEEEEEHHHH
T ss_pred EeCCcCcEEEEEe--cCCEEEEEeC----CCcEEEEECCCC
Confidence 9999999999999 6778887766 899999997543
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.85 E-value=3.7e-19 Score=160.99 Aligned_cols=171 Identities=20% Similarity=0.312 Sum_probs=141.8
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (359)
...+..+|...|++++|+|++ .++|+|+.||+|+||++.. .+.+..+.+|...+.++.
T Consensus 59 ~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~---------------------~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 59 QLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQ---------------------QKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEECCSSCEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCC---------------------ceeEEEecCccceEEEee
Confidence 334556789999999999999 8999999999999999987 677888999999888877
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC---ce
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS---AL 313 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~---~~ 313 (359)
+.+ . .|++|+.++.+++|+........ ..+.+|...+..+.|++.+. +|++++.||+|+|||++++.. ..
T Consensus 117 ~~~--~-~l~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~ 189 (318)
T 4ggc_A 117 WNS--Y-ILSSGSRSGHIHHHDVRVAEHHV---ATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPL 189 (318)
T ss_dssp EET--T-EEEEEETTSEEEEEETTSSSCEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCS
T ss_pred cCC--C-EEEEEecCCceEeeecCCCceeE---EEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccce
Confidence 754 4 89999999999999987744443 56789999999999999999 999999999999999998622 34
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.....|...|.++.|+|.+..++... .+..++.|++|+...+.
T Consensus 190 ~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 190 QTFTQHQGAVKAVAWCPWQSNVLATG-GGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp EEECCCCSCEEEEEECTTSTTEEEEE-ECTTTCEEEEEETTTCC
T ss_pred eeecccCCceEEEEecCCCCcEEEEE-ecCCCCEEEEEeccccc
Confidence 45577888999999999887665432 23457899999987754
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.85 E-value=5.9e-20 Score=170.63 Aligned_cols=171 Identities=13% Similarity=0.110 Sum_probs=120.4
Q ss_pred eeeEEEeCCCCcEEEE-EeCCCcEEEEECCCCccccccccccccCCCCCCCCCCC-cEEecCCCCceEEEEeCCCCCCeE
Q 018235 168 VNRIRAMTQNPHICAS-WADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP-LVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 168 V~~i~~~p~~~~~lat-~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
...+.+++ . .++++ |+.+|.|++||+............. ......| +..+.+|...|.+++|+|++. +|
T Consensus 140 ~~~~~~s~-~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~------~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l 210 (355)
T 3vu4_A 140 GGVCEFSN-G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGV------QQKAILGKGVLIKAHTNPIKMVRLNRKSD-MV 210 (355)
T ss_dssp EEEEEEET-T-EEEEEESSCTTCEEEEECCC------------------------CCEEECCCSSCEEEEEECTTSS-EE
T ss_pred CceEEEEc-c-EEEEeCCCcCcEEEEEECCCCCccccccccc------cccccCcccEEEEccCCceEEEEECCCCC-EE
Confidence 33455666 3 34333 6899999999998621000000000 0001234 788999999999999999998 99
Q ss_pred EEEcCCCc-EEEEecCCCCcceecCcccc-C-CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC-ceEEe-----
Q 018235 246 VTGDCNSC-IYLWEPASDATWNVDPNPFI-G-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS-ALTSF----- 316 (359)
Q Consensus 246 ~sgs~dg~-I~lwd~~~~~~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~-~~~~~----- 316 (359)
+||+.||+ |++||+++ +..+ ..+. + |...|.+++|+|++. +|++|+.|++|+|||++.... ....+
T Consensus 211 ~s~s~d~~~v~iwd~~~-~~~~---~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~ 285 (355)
T 3vu4_A 211 ATCSQDGTIIRVFKTED-GVLV---REFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKGWIN 285 (355)
T ss_dssp EEEETTCSEEEEEETTT-CCEE---EEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTTTEE
T ss_pred EEEeCCCCEEEEEECCC-CcEE---EEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccceee
Confidence 99999998 99999987 4444 4566 5 999999999999999 999999999999999986521 11111
Q ss_pred ----------------ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 317 ----------------KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 317 ----------------~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
..+......++|++++..++.... ++.+.+|+...+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~----dg~~~~~~~~~~ 337 (355)
T 3vu4_A 286 MKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPH----TRMIETFKVVFD 337 (355)
T ss_dssp CCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETT----TTEEEEEEEEEE
T ss_pred ccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeC----CCeEEEEEEEcC
Confidence 111223477899999998888876 888999986543
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=4e-20 Score=178.50 Aligned_cols=196 Identities=11% Similarity=0.044 Sum_probs=148.7
Q ss_pred cCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (359)
Q Consensus 66 ~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 145 (359)
+-+..++.|-||+ .++++++. +..+.||+..
T Consensus 85 ~~~V~~vawSPdG-----------~~LAs~s~-----dg~V~iwd~~--------------------------------- 115 (588)
T 2j04_A 85 VCYPRVCKPSPID-----------DWMAVLSN-----NGNVSVFKDN--------------------------------- 115 (588)
T ss_dssp SCCEEEEEECSSS-----------SCEEEEET-----TSCEEEEETT---------------------------------
T ss_pred CCcEEEEEECCCC-----------CEEEEEeC-----CCcEEEEeCC---------------------------------
Confidence 4567899999986 46777773 4578888741
Q ss_pred cccCCCCCCCeEEEEEecCCC-----ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCC
Q 018235 146 DDEEGGSGTPILQLRKVAHQG-----CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220 (359)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~-----~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (359)
. +...+. |.. .|.+++|+|+| .+||+|+.||+|+|||+.... -..
T Consensus 116 --------~--~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~------------------l~~ 165 (588)
T 2j04_A 116 --------K--MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNS------------------ENT 165 (588)
T ss_dssp --------E--EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCT------------------TTC
T ss_pred --------c--eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCc------------------ccc
Confidence 1 223333 554 59999999999 899999999999999998721 001
Q ss_pred ----CcEEe----cCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCE
Q 018235 221 ----PLVKF----GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDV 291 (359)
Q Consensus 221 ----~~~~~----~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~ 291 (359)
.+.++ .+|...|++++|+|++ |++++.|++|++|++... ......+.+ .+|...|.+++|+ +. .
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~-~~~~~~~tL~~~h~~~V~svaFs--g~-~ 238 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSAS-SHQPVSRMIQNASRRKITDLKIV--DY-K 238 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSS-SSCCCEEEEECCCSSCCCCEEEE--TT-E
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCC-ccccceeeecccccCcEEEEEEE--CC-E
Confidence 24565 7788899999999987 788888999999999763 321001335 4788999999999 55 8
Q ss_pred EEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEE--cCCCCeEEEEeeecccceEEEEEeCc
Q 018235 292 FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISW--NRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 292 las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~--s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+|+++ +++|++||+..+ .......+|.+.|+.+.| +|++..++.+.. ++. ++|...
T Consensus 239 LASa~-~~tIkLWd~~~~-~~~~~~~gh~~~V~~va~~~s~d~~~La~a~e----dG~-klw~~d 296 (588)
T 2j04_A 239 VVLTC-PGYVHKIDLKNY-SISSLKTGSLENFHIIPLNHEKESTILLMSNK----TSY-KVLLED 296 (588)
T ss_dssp EEEEC-SSEEEEEETTTT-EEEEEECSCCSCCCEEEETTCSSCEEEEECSS----CEE-EEEESS
T ss_pred EEEEe-CCeEEEEECCCC-eEEEEEcCCCceEEEEEeeeCCCCCEEEEEcC----CCC-EEEeec
Confidence 89887 699999999985 332223389999999999 999988888776 788 999763
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.85 E-value=1.2e-19 Score=173.13 Aligned_cols=161 Identities=18% Similarity=0.288 Sum_probs=132.2
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
.....+.+|.+.|+++.|++ .++++++.||.|++||+.. .+.+..+.+|...|.++
T Consensus 150 ~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~---------------------~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAET---------------------GECIHTLYGHTSTVRCM 205 (445)
T ss_dssp CEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEE
T ss_pred cEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCc---------------------CcEEEEECCCCCcEEEE
Confidence 34566778999999999983 6899999999999999987 56677888899999999
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
.|++ . .|++|+.||+|++||+++ +... ..+.+|...|.+++| ++. +|++|+.||.|++||++++ .++..
T Consensus 206 ~~~~--~-~l~s~s~dg~i~~wd~~~-~~~~---~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~-~~~~~ 274 (445)
T 2ovr_B 206 HLHE--K-RVVSGSRDATLRVWDIET-GQCL---HVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETE-TCLHT 274 (445)
T ss_dssp EEET--T-EEEEEETTSEEEEEESSS-CCEE---EEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGT-EEEEE
T ss_pred EecC--C-EEEEEeCCCEEEEEECCC-CcEE---EEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCC-cEeEE
Confidence 9963 3 799999999999999877 4443 567788899999988 455 7889999999999999887 67778
Q ss_pred eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 316 FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 316 ~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+..|...|.+++| ++..++.+.. ++.|++||.+++.
T Consensus 275 ~~~~~~~v~~~~~--~~~~l~~~~~----d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 275 LQGHTNRVYSLQF--DGIHVVSGSL----DTSIRVWDVETGN 310 (445)
T ss_dssp ECCCSSCEEEEEE--CSSEEEEEET----TSCEEEEETTTCC
T ss_pred ecCCCCceEEEEE--CCCEEEEEeC----CCeEEEEECCCCC
Confidence 8888889999988 6777777765 7888899887765
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=1.3e-18 Score=165.97 Aligned_cols=160 Identities=20% Similarity=0.370 Sum_probs=133.9
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (359)
....+.+|.+.|+++.+ ++ .++++++.||.|++||+.. ..++..+.+|...+.+++
T Consensus 231 ~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~---------------------~~~~~~~~~~~~~v~~~~ 286 (445)
T 2ovr_B 231 CLHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPET---------------------ETCLHTLQGHTNRVYSLQ 286 (445)
T ss_dssp EEEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGG---------------------TEEEEEECCCSSCEEEEE
T ss_pred EEEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCC---------------------CcEeEEecCCCCceEEEE
Confidence 44566688889998888 34 6788888899999999876 567788999999999999
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
| ++. +|++|+.||.|++||+++ +... ..+.+|...+.++.++ +. +|++|+.||.|++||++++ .++..+
T Consensus 287 ~--~~~-~l~~~~~d~~i~i~d~~~-~~~~---~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~-~~~~~~ 355 (445)
T 2ovr_B 287 F--DGI-HVVSGSLDTSIRVWDVET-GNCI---HTLTGHQSLTSGMELK--DN-ILVSGNADSTVKIWDIKTG-QCLQTL 355 (445)
T ss_dssp E--CSS-EEEEEETTSCEEEEETTT-CCEE---EEECCCCSCEEEEEEE--TT-EEEEEETTSCEEEEETTTC-CEEEEE
T ss_pred E--CCC-EEEEEeCCCeEEEEECCC-CCEE---EEEcCCcccEEEEEEe--CC-EEEEEeCCCeEEEEECCCC-cEEEEE
Confidence 9 555 999999999999999987 4444 5678899999998885 34 8999999999999999987 677777
Q ss_pred ec---CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 317 KA---HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 317 ~~---h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.. |...|++++|+ +.+++.+.. ++.|++|+..+++
T Consensus 356 ~~~~~~~~~v~~~~~~--~~~l~s~~~----dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 356 QGPNKHQSAVTCLQFN--KNFVITSSD----DGTVKLWDLKTGE 393 (445)
T ss_dssp CSTTSCSSCEEEEEEC--SSEEEEEET----TSEEEEEETTTCC
T ss_pred ccCCCCCCCEEEEEEC--CCEEEEEeC----CCeEEEEECCCCc
Confidence 65 88999999996 567777765 8999999998875
No 119
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=7.1e-20 Score=189.88 Aligned_cols=162 Identities=12% Similarity=0.068 Sum_probs=133.3
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
....+|.+.|++++|+|++ .+||+|+.||.|+||+... ......+ .|...|.+|+|+
T Consensus 11 ~~~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~---------------------~~~~~~~-~~~~~V~~l~fs 67 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQ---------------------VEVVIKL-EDRSAIKEMRFV 67 (902)
T ss_dssp EEEEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTT---------------------CEEEEEC-SSCCCEEEEEEE
T ss_pred ccccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCC---------------------cEEEEEc-CCCCCEEEEEEc
Confidence 5567999999999999999 8999999999999999765 2333333 477899999999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce-----
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL----- 313 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~----- 313 (359)
| +. +|++++.|++|++||+++ ++.+ ..+. |...|++++|+|++. +|++|+.||.|++||+++. ...
T Consensus 68 p-g~-~L~S~s~D~~v~lWd~~~-~~~~---~~~~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~-~~~~~~i~ 138 (902)
T 2oaj_A 68 K-GI-YLVVINAKDTVYVLSLYS-QKVL---TTVF-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRD-QLSSFKLD 138 (902)
T ss_dssp T-TT-EEEEEETTCEEEEEETTT-CSEE---EEEE-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTT-EEEEEEEC
T ss_pred C-CC-EEEEEECcCeEEEEECCC-CcEE---EEEc-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCC-ccccceec
Confidence 9 76 899999999999999987 4443 3443 678999999999999 9999999999999999986 322
Q ss_pred ------EEeecCCCCEEEEEEcCCC-CeEEEEeeecccceEEEEEeCcCCc
Q 018235 314 ------TSFKAHNADVNVISWNRCW-LAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ------~~~~~h~~~V~~i~~s~~~-~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+.+|...|++|+|+|++ ..++.+.. ++.+ +||.+++.
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~----dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE----YVTL-TYSLVENE 184 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS----SCEE-EEETTTTE
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEeC----CCcE-EEECCCCc
Confidence 1235689999999999975 56666554 8889 99988764
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.4e-19 Score=174.71 Aligned_cols=159 Identities=13% Similarity=0.147 Sum_probs=127.3
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC-----ceEEEEe
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-----EGYAIDW 237 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~ 237 (359)
+|...|.+++|+|+| .++|+++.||.|+|||... .+..+. |.. .+.+++|
T Consensus 83 ~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~-----------------------~l~~l~-~~~~~~~~sv~svaf 137 (588)
T 2j04_A 83 QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK-----------------------MLTNLD-SKGNLSSRTYHCFEW 137 (588)
T ss_dssp SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE-----------------------EEEECC-CSSCSTTTCEEEEEE
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc-----------------------eeeecc-CCCccccccEEEEEE
Confidence 668899999999999 8999999999999999543 334455 554 5999999
Q ss_pred CCCCCCeEEEEcCCCcEEEEecCCCCcce----ecCccc----cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCC
Q 018235 238 NPITTGRLVTGDCNSCIYLWEPASDATWN----VDPNPF----IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (359)
Q Consensus 238 sp~~~~~l~sgs~dg~I~lwd~~~~~~~~----~~~~~~----~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (359)
||++. +||+|+.||+|+||++.. +... .....+ .+|...|.+++|+|++ +++++.|++|++||+...
T Consensus 138 SPDG~-~LAsgs~DGtVkIWd~~~-~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 138 NPIES-SIVVGNEDGELQFFSIRK-NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp CSSSS-CEEEEETTSEEEEEECCC-CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSS
T ss_pred cCCCC-EEEEEcCCCEEEEEECCC-CccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCC
Confidence 99998 999999999999999987 3320 001333 6788999999999998 788899999999999886
Q ss_pred CC--ceEEe-ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 310 KS--ALTSF-KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 310 ~~--~~~~~-~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.. ...++ .+|...|.+++|+ +..++.++ ++.|++|+...+..
T Consensus 213 ~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-----~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 213 SHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-----PGYVHKIDLKNYSI 257 (588)
T ss_dssp SSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-----SSEEEEEETTTTEE
T ss_pred ccccceeeecccccCcEEEEEEE--CCEEEEEe-----CCeEEEEECCCCeE
Confidence 21 23456 4788999999999 67776663 57899999887653
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.83 E-value=5.8e-20 Score=168.23 Aligned_cols=160 Identities=11% Similarity=0.087 Sum_probs=132.5
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
.+|.+.|++++|+|++ .+|++++.||.|+||++.... ...+...+.+|...+.+++|+|++
T Consensus 8 ~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~ 68 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQA------------------KNVDLLQSLRYKHPLLCCNFIDNT 68 (342)
T ss_dssp SCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTT------------------TEEEEEEEEECSSCEEEEEEEESS
T ss_pred cCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCC------------------ccccceeeeecCCceEEEEECCCC
Confidence 4799999999999998 789999999999999998621 011245566899999999999986
Q ss_pred CCeEEEEcCCCcEEEEec-CCCCcceecCccccC--CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCC---------C
Q 018235 242 TGRLVTGDCNSCIYLWEP-ASDATWNVDPNPFIG--HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV---------G 309 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~-~~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~---------~ 309 (359)
..+|++|+.||.|++|++ .. +.. ..+.+ |...|.+++|+| +. +|++++.|+.|++||+++ .
T Consensus 69 ~~~l~~~~~dg~i~~wd~~~~-~~~----~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 141 (342)
T 1yfq_A 69 DLQIYVGTVQGEILKVDLIGS-PSF----QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKN 141 (342)
T ss_dssp SEEEEEEETTSCEEEECSSSS-SSE----EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEE
T ss_pred CcEEEEEcCCCeEEEEEeccC-Cce----EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccC
Confidence 327999999999999999 76 332 45677 999999999999 66 999999999999999987 5
Q ss_pred CCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 310 KSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
.++..+. |...|.+++|++++ ++.+.. ++.|++|+.+.
T Consensus 142 -~~~~~~~-~~~~v~~~~~~~~~--l~~~~~----d~~i~i~d~~~ 179 (342)
T 1yfq_A 142 -LNSNNTK-VKNKIFTMDTNSSR--LIVGMN----NSQVQWFRLPL 179 (342)
T ss_dssp -SCSSSSS-SCCCEEEEEECSSE--EEEEES----TTEEEEEESSC
T ss_pred -CeeeEEe-eCCceEEEEecCCc--EEEEeC----CCeEEEEECCc
Confidence 4555555 88999999999988 555554 78899999987
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=1.8e-19 Score=172.00 Aligned_cols=175 Identities=11% Similarity=0.097 Sum_probs=131.2
Q ss_pred EecCCCceeeEEEeCCCCcEEE----EEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCC---cEEecCCCCceE
Q 018235 161 KVAHQGCVNRIRAMTQNPHICA----SWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP---LVKFGGHKDEGY 233 (359)
Q Consensus 161 ~~~H~~~V~~i~~~p~~~~~la----t~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~v~ 233 (359)
.+.|.+.|++++|+|++ .+|| +++.|+.|+|||+........ ...++ +..+.+|...|.
T Consensus 88 ~~~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~-------------~~~~~~~~~~~~~~h~~~V~ 153 (434)
T 2oit_A 88 LVPMKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAK-------------QQKRPFAYHKLLKDAGGMVI 153 (434)
T ss_dssp EECCSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTC-------------SSCCCSEEEECCCSGGGSEE
T ss_pred cccCCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCc-------------CCcceeeeeeccCCCCCceE
Confidence 45788999999999999 5666 888999999999865210000 00122 345677999999
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
+++|+|....+|++|+.||+|++||+++. ... ....+|...|.+++|+|++. +|++|+.||.|++||++ + ...
T Consensus 154 ~v~~~p~~~~~las~s~Dg~v~iwD~~~~-~~~---~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~-~~~ 226 (434)
T 2oit_A 154 DMKWNPTVPSMVAVCLADGSIAVLQVTET-VKV---CATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-L-QEK 226 (434)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEEESSS-EEE---EEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-C-CEE
T ss_pred EEEECCCCCCEEEEEECCCeEEEEEcCCC-cce---eeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-C-ccc
Confidence 99999985449999999999999999874 322 34556889999999999998 99999999999999999 3 444
Q ss_pred EEeecC-------CCCEEEEEEcCCCCeEEEEeeec---ccceEEEEEeCcCC
Q 018235 314 TSFKAH-------NADVNVISWNRCWLAVCWHLEVM---MEHFLFMILDCSRG 356 (359)
Q Consensus 314 ~~~~~h-------~~~V~~i~~s~~~~~l~~~~~~~---~~d~~i~iwd~~~g 356 (359)
..+..| ...|.+++|++++.+++...... .....+++|+.++.
T Consensus 227 ~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 227 KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 444333 23799999999888776544321 11245889998754
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=8.8e-18 Score=156.93 Aligned_cols=166 Identities=12% Similarity=0.057 Sum_probs=129.3
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
+.+...+++++|+|++..++++++.++.|++||+.. .+.+..+..| ..+.+++|+|++
T Consensus 70 ~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~---------------------~~~~~~~~~~-~~~~~~~~s~dg 127 (391)
T 1l0q_A 70 VPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS---------------------NTVAGTVKTG-KSPLGLALSPDG 127 (391)
T ss_dssp EECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---------------------TEEEEEEECS-SSEEEEEECTTS
T ss_pred EECCCCccceEECCCCCEEEEEECCCCEEEEEECCC---------------------CeEEEEEeCC-CCcceEEECCCC
Confidence 344559999999999966777888889999999987 4455555544 468999999999
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCC
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA 321 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~ 321 (359)
..++++++.++.|++||+.+ ++.. ..+..| ..+.+++|+|++..++++++.++.|++||++++ ..+..+. +..
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~-~~~~---~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~-~~~ 200 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVT-KAVI---NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SVIDTVK-VEA 200 (391)
T ss_dssp SEEEEEETTTTEEEEEETTT-TEEE---EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEE-CSS
T ss_pred CEEEEEeCCCCEEEEEECCC-CcEE---EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-eEEEEEe-cCC
Confidence 83448999999999999977 4443 344444 567999999999856688899999999999986 5554444 566
Q ss_pred CEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 322 DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 322 ~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.+.+++|+|++.+++.... ...++.|.+||..++.
T Consensus 201 ~~~~~~~~~~g~~l~~~~~-~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 201 APSGIAVNPEGTKAYVTNV-DKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEEEEECTTSSEEEEEEE-CSSCCEEEEEETTTTE
T ss_pred CccceEECCCCCEEEEEec-CcCCCcEEEEECCCCe
Confidence 7999999999998887763 1127889999998765
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.79 E-value=2.4e-17 Score=154.02 Aligned_cols=164 Identities=11% Similarity=0.012 Sum_probs=128.9
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
+.+...+.+++|+|++..++++++.++.|++||+.. .+.+..+..|. .+.+++|+|++
T Consensus 112 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~---------------------~~~~~~~~~~~-~~~~~~~~~dg 169 (391)
T 1l0q_A 112 VKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT---------------------KAVINTVSVGR-SPKGIAVTPDG 169 (391)
T ss_dssp EECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---------------------TEEEEEEECCS-SEEEEEECTTS
T ss_pred EeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---------------------CcEEEEEecCC-CcceEEECCCC
Confidence 345667899999999966668999999999999986 45556666554 56899999999
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEe---CCCcEEEEECCCCCCceEEeec
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS---VDGHIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s---~Dg~I~iwD~r~~~~~~~~~~~ 318 (359)
..++++++.++.|++||+++ +... ..+ .+...+.+++|+|++. .|++++ .++.|++||++++ +.+..+..
T Consensus 170 ~~l~~~~~~~~~v~~~d~~~-~~~~---~~~-~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~v~~~d~~~~-~~~~~~~~ 242 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTVT-NSVI---DTV-KVEAAPSGIAVNPEGT-KAYVTNVDKYFNTVSMIDTGTN-KITARIPV 242 (391)
T ss_dssp SEEEEEETTTTEEEEEETTT-TEEE---EEE-ECSSEEEEEEECTTSS-EEEEEEECSSCCEEEEEETTTT-EEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEECCC-CeEE---EEE-ecCCCccceEECCCCC-EEEEEecCcCCCcEEEEECCCC-eEEEEEec
Confidence 83447888999999999987 4433 223 3567899999999998 666665 7999999999987 66667766
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 319 HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 319 h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
|. .+.+++|+|+++.++.... .++.|++||..++++
T Consensus 243 ~~-~~~~~~~s~dg~~l~~s~~---~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 243 GP-DPAGIAVTPDGKKVYVALS---FXNTVSVIDTATNTI 278 (391)
T ss_dssp CS-SEEEEEECTTSSEEEEEET---TTTEEEEEETTTTEE
T ss_pred CC-CccEEEEccCCCEEEEEcC---CCCEEEEEECCCCcE
Confidence 55 5899999999998866543 278999999987753
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.79 E-value=8e-18 Score=159.37 Aligned_cols=164 Identities=11% Similarity=0.009 Sum_probs=132.0
Q ss_pred EecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCC
Q 018235 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (359)
Q Consensus 161 ~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 240 (359)
..+|.+.|++++|+|++ .++++++.++.|++||+.. ...+..+..|...+.+++|+|+
T Consensus 165 ~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ 222 (433)
T 3bws_A 165 YKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKT---------------------LAYKATVDLTGKWSKILLYDPI 222 (433)
T ss_dssp HHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTT---------------------CCEEEEEECSSSSEEEEEEETT
T ss_pred ccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCC---------------------ceEEEEEcCCCCCeeEEEEcCC
Confidence 34799999999999988 8999999999999999986 5667788889999999999999
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEe--------CCCcEEEEECCCCCCc
Q 018235 241 TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS--------VDGHIAIWDTRVGKSA 312 (359)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s--------~Dg~I~iwD~r~~~~~ 312 (359)
+..++++++.++.|++||+++ +... ..+.. ...+.+++|+|++. .+++++ .||.|++||++++ +.
T Consensus 223 ~~~l~~~~~~~~~i~~~d~~~-~~~~---~~~~~-~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~-~~ 295 (433)
T 3bws_A 223 RDLVYCSNWISEDISVIDRKT-KLEI---RKTDK-IGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKE-KL 295 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTT-TEEE---EECCC-CSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTT-EE
T ss_pred CCEEEEEecCCCcEEEEECCC-CcEE---EEecC-CCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCC-cE
Confidence 983446777899999999987 4433 33333 45699999999998 777766 5889999999986 44
Q ss_pred eEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 313 LTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 313 ~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+.. ..|...+.+++|+|++..+++.... ++.+++|+..++.
T Consensus 296 ~~~-~~~~~~~~~~~~~~~g~~l~~~~~~---~~~v~v~d~~~~~ 336 (433)
T 3bws_A 296 IDT-IGPPGNKRHIVSGNTENKIYVSDMC---CSKIEVYDLKEKK 336 (433)
T ss_dssp EEE-EEEEECEEEEEECSSTTEEEEEETT---TTEEEEEETTTTE
T ss_pred Eee-ccCCCCcceEEECCCCCEEEEEecC---CCEEEEEECCCCc
Confidence 433 3466689999999999877665432 7899999998765
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=8.8e-19 Score=167.29 Aligned_cols=176 Identities=12% Similarity=0.119 Sum_probs=129.6
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCe
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 244 (359)
...++.+++++.+ .++++++.+| |+||+............ .........+...+ .|...+++++|+|++. +
T Consensus 36 ~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~-~ 106 (434)
T 2oit_A 36 KERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGD-----DPNKIVDKVQGLLV-PMKFPIHHLALSCDNL-T 106 (434)
T ss_dssp CSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTC-----CTTCEEECCCCEEE-CCSSCEEEEEECTTSC-E
T ss_pred CCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhccccc-----CcccccccCccccc-cCCCcccEEEEcCCCC-E
Confidence 3468999999988 6888888888 99988643111000000 00000001222223 4567899999999998 8
Q ss_pred EE----EEcCCCcEEEEecCCC-----C--cceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 245 LV----TGDCNSCIYLWEPASD-----A--TWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 245 l~----sgs~dg~I~lwd~~~~-----~--~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
|+ +|+.|+.|+|||+++. . +.......+.+|...|.+++|+|+...+||+|+.||+|+|||++++ ..+
T Consensus 107 lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-~~~ 185 (434)
T 2oit_A 107 LSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-VKV 185 (434)
T ss_dssp EEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-EEE
T ss_pred EEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-cce
Confidence 88 8999999999998652 0 1111124567799999999999995559999999999999999987 555
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.....|...|++++|+|+|.+|+.+.. ++.|++|+.+
T Consensus 186 ~~~~~~~~~v~~v~wspdg~~lasgs~----dg~v~iwd~~ 222 (434)
T 2oit_A 186 CATLPSTVAVTSVCWSPKGKQLAVGKQ----NGTVVQYLPT 222 (434)
T ss_dssp EEEECGGGCEEEEEECTTSSCEEEEET----TSCEEEECTT
T ss_pred eeccCCCCceeEEEEcCCCCEEEEEcC----CCcEEEEccC
Confidence 566778999999999999999998876 8899999987
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.77 E-value=5e-17 Score=153.90 Aligned_cols=172 Identities=9% Similarity=-0.016 Sum_probs=134.6
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (359)
....+..|...+++++|+|++..++++++.++.|++||+.. ...+..+..+ ..+.+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~-~~~~~~~ 260 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT---------------------KLEIRKTDKI-GLPRGLL 260 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT---------------------TEEEEECCCC-SEEEEEE
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC---------------------CcEEEEecCC-CCceEEE
Confidence 33455589999999999999966667877899999999976 3445555544 4689999
Q ss_pred eCCCCCCeEEEEc--------CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCC
Q 018235 237 WNPITTGRLVTGD--------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (359)
Q Consensus 237 ~sp~~~~~l~sgs--------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (359)
|+|++. +|++++ .||.|++||+++ ++.. ....|...+.+++|+|++..++++++.++.|++||+++
T Consensus 261 ~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~----~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 261 LSKDGK-ELYIAQFSASNQESGGGRLGIYSMDK-EKLI----DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp ECTTSS-EEEEEEEESCTTCSCCEEEEEEETTT-TEEE----EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred EcCCCC-EEEEEECCCCccccCCCeEEEEECCC-CcEE----eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 999998 888777 588999999987 4433 22345668899999999986788889999999999998
Q ss_pred CCCceEEeecCCCCEEEEEEcCCCCeEEEEeeec-----------ccceEEEEEeCcCCcc
Q 018235 309 GKSALTSFKAHNADVNVISWNRCWLAVCWHLEVM-----------MEHFLFMILDCSRGEI 358 (359)
Q Consensus 309 ~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~-----------~~d~~i~iwd~~~g~v 358 (359)
+ +.+..+. +...+.+++|+|++.+++.+.... ..++.|.+|+..++++
T Consensus 335 ~-~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 335 K-KVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp T-EEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred C-cEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 6 5555554 778899999999999887776421 1246899999987753
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=6.3e-16 Score=146.59 Aligned_cols=167 Identities=10% Similarity=0.004 Sum_probs=129.9
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCC---cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTG---HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg---~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
..+..|.+.|.+++|+|++ ..||+++.++ .|++||+.. .+. ..+..|...+.++
T Consensus 172 ~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~t---------------------g~~-~~l~~~~~~~~~~ 228 (415)
T 2hqs_A 172 FVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLAN---------------------GAV-RQVASFPRHNGAP 228 (415)
T ss_dssp EEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTT---------------------CCE-EEEECCSSCEEEE
T ss_pred EEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCC---------------------CcE-EEeecCCCcccCE
Confidence 3455789999999999999 6777777765 999999987 333 3566788889999
Q ss_pred EeCCCCCCeEE-EEcCCCc--EEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeC-CC--cEEEEECCCC
Q 018235 236 DWNPITTGRLV-TGDCNSC--IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DG--HIAIWDTRVG 309 (359)
Q Consensus 236 ~~sp~~~~~l~-sgs~dg~--I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg--~I~iwD~r~~ 309 (359)
+|+|++. +|+ +++.++. |++||+.+ +.. ..+..|...+.+++|+|++. .|++++. ++ .|.+||+.++
T Consensus 229 ~~spdg~-~la~~~~~~g~~~i~~~d~~~-~~~----~~l~~~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 229 AFSPDGS-KLAFALSKTGSLNLYVMDLAS-GQI----RQVTDGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp EECTTSS-EEEEEECTTSSCEEEEEETTT-CCE----EECCCCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSS
T ss_pred EEcCCCC-EEEEEEecCCCceEEEEECCC-CCE----EeCcCCCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCCC
Confidence 9999998 666 7776665 99999976 332 35667888999999999999 6776665 55 5777798875
Q ss_pred CCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 310 KSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
....+..|...+.+++|+|+|++|++.... .....|.+|+..++.+
T Consensus 302 --~~~~l~~~~~~~~~~~~spdG~~l~~~~~~-~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 302 --APQRITWEGSQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATGGV 347 (415)
T ss_dssp --CCEECCCSSSEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTCCE
T ss_pred --CEEEEecCCCcccCeEECCCCCEEEEEECc-CCceEEEEEECCCCCE
Confidence 344566677789999999999999887642 1246899999988754
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.75 E-value=2.6e-17 Score=149.86 Aligned_cols=161 Identities=10% Similarity=0.019 Sum_probs=112.7
Q ss_pred CCCceeeEEEeCC----CCcEEEEEeC--------------------CCcEEEEECCCCccccccccccccCCCCCCCCC
Q 018235 164 HQGCVNRIRAMTQ----NPHICASWAD--------------------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219 (359)
Q Consensus 164 H~~~V~~i~~~p~----~~~~lat~s~--------------------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (359)
|.+.|+.+.++|+ + .++++++. ++.|++|++.. .+
T Consensus 110 ~~~~v~sla~spd~~~~~-~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~--------------------dG 168 (356)
T 2w18_A 110 EIREIRALFCSSDDESEK-QVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE--------------------DG 168 (356)
T ss_dssp SEEEEEEECC------CC-EEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT--------------------TS
T ss_pred cccceEEEEECCCccccc-cEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC--------------------CC
Confidence 4467888888888 6 55665552 55555555543 25
Q ss_pred CCcEEecCCCCceEEEEeCC---CCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCC---CCeEEEEecCCCCCEE-
Q 018235 220 SPLVKFGGHKDEGYAIDWNP---ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHS---ASVEDLQWSPTEPDVF- 292 (359)
Q Consensus 220 ~~~~~~~~h~~~v~~l~~sp---~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~---~~V~~v~~sp~~~~~l- 292 (359)
+.+..+.+|...+..++|++ ++. +|+||+.|++|+|||+++ ++.+ +.+.+|. ..|.+++|+|++. ++
T Consensus 169 ~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~T-Gk~l---~tL~g~~~~v~~v~~vafSpdG~-~lv 242 (356)
T 2w18_A 169 GGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKT-GQLL---KKMHIDDSYQASVCHKAYSEMGL-LFI 242 (356)
T ss_dssp CEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTT-CCEE---EEEECCC---CCCEEEEEEETTE-EEE
T ss_pred ceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCC-CcEE---EEEcCCCcceeeeEEEEECCCCC-EEE
Confidence 56677888999999999999 556 999999999999999988 5554 5566543 4678889999998 54
Q ss_pred -----------EEEeCCCcEEEEECCCCCCceEEe-----ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 293 -----------ASCSVDGHIAIWDTRVGKSALTSF-----KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 293 -----------as~s~Dg~I~iwD~r~~~~~~~~~-----~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
++|+.|++|++||..++ ..+..+ .+|...+.+.+++ +.+++.+.. |++|+|||..+|
T Consensus 243 s~s~~~~~w~laSGs~D~tIklWd~~tg-k~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~----DgTIkIWDl~tG 315 (356)
T 2w18_A 243 VLSHPCAKESESLRSPVFQLIVINPKTT-LSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILT----SGTIAIWDLLLG 315 (356)
T ss_dssp EEC------------CCEEEEEEETTTT-EEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEET----TSCEEEEETTTC
T ss_pred EeccCCCcceeeccCCCcEEEEEECCCC-EEEEEEEeeccCCCcceeEccccC--CCEEEEEcC----CCcEEEEECCCC
Confidence 67889999999999987 544433 3565555444444 666666655 889999999988
Q ss_pred cc
Q 018235 357 EI 358 (359)
Q Consensus 357 ~v 358 (359)
+.
T Consensus 316 k~ 317 (356)
T 2w18_A 316 QC 317 (356)
T ss_dssp SE
T ss_pred cE
Confidence 63
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=9e-16 Score=145.51 Aligned_cols=165 Identities=12% Similarity=0.059 Sum_probs=124.0
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeCCCc--EEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEe
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWADTGH--VQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~--V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (359)
.+..|.+.+.+++|+|++..++++++.+|. |++||+.. .. ...+..|...+.+++|
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---------------------~~-~~~l~~~~~~~~~~~~ 274 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---------------------GQ-IRQVTDGRSNNTEPTW 274 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---------------------CC-EEECCCCSSCEEEEEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC---------------------CC-EEeCcCCCCcccceEE
Confidence 456788999999999999555557777665 88999876 22 3567788889999999
Q ss_pred CCCCCCeEEEEcC-CC--cEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC---CcEEEEECCCCCC
Q 018235 238 NPITTGRLVTGDC-NS--CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD---GHIAIWDTRVGKS 311 (359)
Q Consensus 238 sp~~~~~l~sgs~-dg--~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D---g~I~iwD~r~~~~ 311 (359)
+|++. +|++++. ++ .|++||+.. +.. ..+..|...+.+++|+|++. .|++++.+ +.|++||+.++ .
T Consensus 275 spdg~-~l~~~s~~~g~~~i~~~d~~~-~~~----~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~-~ 346 (415)
T 2hqs_A 275 FPDSQ-NLAFTSDQAGRPQVYKVNING-GAP----QRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATG-G 346 (415)
T ss_dssp CTTSS-EEEEEECTTSSCEEEEEETTS-SCC----EECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTTC-C
T ss_pred CCCCC-EEEEEECCCCCcEEEEEECCC-CCE----EEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCCC-C
Confidence 99998 7777665 45 577778866 332 33455677899999999999 77666653 58999999986 3
Q ss_pred ceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 312 ALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 312 ~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
...+..|. .+.+++|+|+|+.|++.... .....|.+|+...+.
T Consensus 347 -~~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 347 -VQVLSSTF-LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVSTDGRF 389 (415)
T ss_dssp -EEECCCSS-SCEEEEECTTSSEEEEEEEE-TTEEEEEEEETTSCC
T ss_pred -EEEecCCC-CcCCeEEcCCCCEEEEEEcC-CCccEEEEEECCCCc
Confidence 34555554 79999999999998887652 112378999977543
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=8.4e-16 Score=136.64 Aligned_cols=167 Identities=14% Similarity=0.130 Sum_probs=121.6
Q ss_pred CCceeeEEEeCCCCcEEEEEe--CCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 165 QGCVNRIRAMTQNPHICASWA--DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s--~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
...|.+++|+|++ .++++++ .++.+.||.+... ......+..+. .+..++|+|++.
T Consensus 84 ~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~--------------------~~~~~~~~~~~-~~~~~~~spdg~ 141 (297)
T 2ojh_A 84 TICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPST--------------------GGTPRLMTKNL-PSYWHGWSPDGK 141 (297)
T ss_dssp CCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETT--------------------CCCCEECCSSS-SEEEEEECTTSS
T ss_pred cccccceEECCCC-CEEEEEEeCCCCcceEEEEECC--------------------CCceEEeecCC-CccceEECCCCC
Confidence 4789999999999 6677766 4456666666431 12234444443 488999999998
Q ss_pred CeEE-EEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEE-EeCCCcEEEEECCCCCCceEEeecCC
Q 018235 243 GRLV-TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS-CSVDGHIAIWDTRVGKSALTSFKAHN 320 (359)
Q Consensus 243 ~~l~-sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las-~s~Dg~I~iwD~r~~~~~~~~~~~h~ 320 (359)
+|+ +++.++.++||++....... ..+..|...+.+++|+|++. .|+. +..++.++||+++.....+..+..|.
T Consensus 142 -~l~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 142 -SFTYCGIRDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGR-WIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp -EEEEEEEETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred -EEEEEECCCCceEEEEEECCCCcc---eEcccCCCccccceECCCCC-EEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 555 88889999999875422222 34666788999999999999 5554 44699999999874335667777788
Q ss_pred CCEEEEEEcCCCCeEEEEeeecc-------cceEEEEEeCcCCcc
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMM-------EHFLFMILDCSRGEI 358 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~-------~d~~i~iwd~~~g~v 358 (359)
..+.+++|+|++.+|++...... ....|.+|+..+++.
T Consensus 217 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 217 YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 88999999999999887765211 236799999887653
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=7.1e-15 Score=130.58 Aligned_cols=165 Identities=9% Similarity=-0.058 Sum_probs=118.3
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCC-CCceEEEEeC
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH-KDEGYAIDWN 238 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~s 238 (359)
.+..|.+.|.+++|+|++ .++++++ ++.|++||+... ..+...+.+| ...+.+++|+
T Consensus 36 ~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~--------------------~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGD--------------------PSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp EEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSC--------------------CSCEECCCTTCCCBCSCCEEC
T ss_pred eeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCC--------------------CCceEeccccccccccceEEC
Confidence 456789999999999999 6777765 789999998751 2333344455 3578899999
Q ss_pred CCCCCeEEEEc--CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 239 PITTGRLVTGD--CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 239 p~~~~~l~sgs--~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
|++. +|++++ .++.+.||.+....... ..+..+ ..+..++|+|++..++++++.++.++||+++........+
T Consensus 94 pdg~-~l~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 94 PDGA-LYAISDKVEFGKSAIYLLPSTGGTP---RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp TTSS-EEEEEECTTTSSCEEEEEETTCCCC---EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred CCCC-EEEEEEeCCCCcceEEEEECCCCce---EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 9998 888887 33555666553322211 233333 3489999999999555588899999999975432455667
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 317 KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 317 ~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
..|...+.+++|+|++..+++.... ++.+++|...
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~---~~~~~i~~~~ 203 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSR---TGQMQIWRVR 203 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECT---TSSCEEEEEE
T ss_pred ccCCCccccceECCCCCEEEEEecC---CCCccEEEEC
Confidence 7788899999999999988876532 4556777654
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.63 E-value=8.6e-14 Score=126.68 Aligned_cols=172 Identities=12% Similarity=0.120 Sum_probs=121.9
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCC-C--cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADT-G--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~d-g--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
.....+...+.+++|+|++ .++++...+ + .|.+||+.. ...+..+..+ ....++
T Consensus 77 ~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~---------------------~~~~~~~~~~-~~~~~~ 133 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLK---------------------NKFISTIPIP-YDAVGI 133 (331)
T ss_dssp EEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTT---------------------TEEEEEEECC-TTEEEE
T ss_pred EecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCC---------------------CCeEEEEECC-CCccce
Confidence 4445566666669999999 555554544 3 899999976 3444455443 356899
Q ss_pred EeCCCCCCeEEEEcCCCc-EEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCc--
Q 018235 236 DWNPITTGRLVTGDCNSC-IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA-- 312 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~-I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~-- 312 (359)
+|+|++..+++++..++. |.+|++...+...............+..++|+|++..+++++..++.|++||+.++ ..
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~-~~~~ 212 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP-ENIT 212 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST-TSCE
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC-cccc
Confidence 999999845556666688 99999976443221001122344568999999999866777778999999999987 55
Q ss_pred -eEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 313 -LTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 313 -~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+..+.. ...+..++|+|+|++++.... .++.|.+|+..++++
T Consensus 213 ~~~~~~~-~~~~~~~~~spdg~~l~v~~~---~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 213 LLNAVGT-NNLPGTIVVSRDGSTVYVLTE---STVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEEEC-SSCCCCEEECTTSSEEEEECS---SEEEEEEEETTTTEE
T ss_pred eeeeccC-CCCCceEEECCCCCEEEEEEc---CCCEEEEEECCCCce
Confidence 555553 456788999999998776654 267799999988764
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.61 E-value=1.1e-13 Score=126.89 Aligned_cols=162 Identities=12% Similarity=0.052 Sum_probs=120.3
Q ss_pred eeeEEEeCCCCcEEEEE-eCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEE
Q 018235 168 VNRIRAMTQNPHICASW-ADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~-s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 246 (359)
+..+.|+|++..++++. +.++.|.+||+.. .+.+..+..+...+.+++|+|++. +|+
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~s~dg~-~l~ 200 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGN---------------------IKLKTAIQNTGKMSTGLALDSEGK-RLY 200 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTT---------------------TEEEEEECCCCTTCCCCEEETTTT-EEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCC---------------------CceEEEecCCCCccceEEECCCCC-EEE
Confidence 68899999995555555 4688999999986 445556654555678999999998 888
Q ss_pred EEcCCCcEEEEecCCCCcceecCc-cccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEE
Q 018235 247 TGDCNSCIYLWEPASDATWNVDPN-PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV 325 (359)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~-~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~ 325 (359)
+++.++.|.+||+.+ ++...... ...++...+.+++|+|++..+++++..++.|.+||+.++ +.+..+..... ..
T Consensus 201 ~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~--~~ 276 (353)
T 3vgz_A 201 TTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-NILAKVAAPES--LA 276 (353)
T ss_dssp EECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC-CEEEEEECSSC--CC
T ss_pred EEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCCC--ce
Confidence 888899999999977 44331001 112356678899999999956666667799999999987 55666654332 56
Q ss_pred EEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 326 ISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 326 i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
++|+|++..++..... ++.|.+||..++++
T Consensus 277 ~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQ---AGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEETTTTEEEEEETT---TTEEEEEETTTTEE
T ss_pred EEECCCCCEEEEEECC---CCeEEEEECCCCeE
Confidence 8999999977666532 67899999987764
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.61 E-value=9.9e-15 Score=147.38 Aligned_cols=162 Identities=10% Similarity=0.070 Sum_probs=116.4
Q ss_pred ceeeEEEeCCCCcEEEEEeCC---------CcEEEEECCCCccccccccccccCCCCCCCCCCC--cEEecCCCCceEEE
Q 018235 167 CVNRIRAMTQNPHICASWADT---------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP--LVKFGGHKDEGYAI 235 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~d---------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~l 235 (359)
.|..++|+|++ ..||+++.+ +.|++||+.. ... +....+|...+..+
T Consensus 62 ~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~---------------------~~~~~l~~~~~~~~~~~~~ 119 (723)
T 1xfd_A 62 RAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPH---------------------GDPQSLDPPEVSNAKLQYA 119 (723)
T ss_dssp TCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSS---------------------CCCEECCCTTCCSCCCSBC
T ss_pred ccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCC---------------------CceEeccCCcccccccccc
Confidence 49999999999 667776653 7889999987 222 11223455558899
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCC------------------CeEEEEecCCCCCEEEEEeC
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA------------------SVEDLQWSPTEPDVFASCSV 297 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~------------------~V~~v~~sp~~~~~las~s~ 297 (359)
+|||++. .||+++. +.|++|++.. +... +....+.. .+.+++|||++. .|++++.
T Consensus 120 ~~SPdG~-~la~~~~-~~i~~~~~~~-g~~~---~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~ 192 (723)
T 1xfd_A 120 GWGPKGQ-QLIFIFE-NNIYYCAHVG-KQAI---RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAI 192 (723)
T ss_dssp CBCSSTT-CEEEEET-TEEEEESSSS-SCCE---EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEE
T ss_pred EECCCCC-EEEEEEC-CeEEEEECCC-CceE---EEecCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEE
Confidence 9999998 8888875 7999999976 3322 12222222 237899999999 7877765
Q ss_pred CC----------------------------------cEEEEECCCCCCceEEeecC------CCCEEEEEEcCCCCeEEE
Q 018235 298 DG----------------------------------HIAIWDTRVGKSALTSFKAH------NADVNVISWNRCWLAVCW 337 (359)
Q Consensus 298 Dg----------------------------------~I~iwD~r~~~~~~~~~~~h------~~~V~~i~~s~~~~~l~~ 337 (359)
|+ .|++||+.++ .....+..+ ...+..++|+|+|++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP-THDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS-CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC-ceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 43 7999999886 444555443 567899999999998866
Q ss_pred EeeecccceEEEEEeCcCCcc
Q 018235 338 HLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 338 ~~~~~~~d~~i~iwd~~~g~v 358 (359)
.......+..|.+||..++.+
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCE
T ss_pred EEcCCCCeEEEEEEeCCCCcc
Confidence 544333457899999887753
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.60 E-value=1.4e-13 Score=135.00 Aligned_cols=159 Identities=9% Similarity=0.085 Sum_probs=122.8
Q ss_pred eeeEEEeCCCCcEEEEEeCCCcEEEEEC--CCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC----CC
Q 018235 168 VNRIRAMTQNPHICASWADTGHVQVWDL--RSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP----IT 241 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg~V~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp----~~ 241 (359)
+..++|+|++ .++++++.++.|.+||+ .. .+.+.++. +......++|+| ++
T Consensus 181 ~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t---------------------~~~~~~i~-~g~~p~~va~sp~~~~dg 237 (543)
T 1nir_A 181 VHISRMSASG-RYLLVIGRDARIDMIDLWAKE---------------------PTKVAEIK-IGIEARSVESSKFKGYED 237 (543)
T ss_dssp EEEEEECTTS-CEEEEEETTSEEEEEETTSSS---------------------CEEEEEEE-CCSEEEEEEECCSTTCTT
T ss_pred cceEEECCCC-CEEEEECCCCeEEEEECcCCC---------------------CcEEEEEe-cCCCcceEEeCCCcCCCC
Confidence 8899999999 78888888899999999 44 34555665 345678999999 99
Q ss_pred CCeEEEEc-CCCcEEEEecCCCCcceecCccccC----------C-CCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCC
Q 018235 242 TGRLVTGD-CNSCIYLWEPASDATWNVDPNPFIG----------H-SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (359)
Q Consensus 242 ~~~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~----------h-~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (359)
. +|++++ .+++|.+||..+ .+.+ ..+.. | ...+..+.++|++..+++++..++.|.+||+...
T Consensus 238 ~-~l~v~~~~~~~v~v~D~~t-~~~~---~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 238 R-YTIAGAYWPPQFAIMDGET-LEPK---QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp T-EEEEEEEESSEEEEEETTT-CCEE---EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred C-EEEEEEccCCeEEEEeccc-cccc---eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 8 777776 489999999877 4433 22221 2 2378999999998878889999999999999886
Q ss_pred CCceE-EeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 310 KSALT-SFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 310 ~~~~~-~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
..+. ....+...+..+.|+|++++++..... ++.|.+||..++++
T Consensus 313 -~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~l 358 (543)
T 1nir_A 313 -DNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRRL 358 (543)
T ss_dssp -SSCEEEEEECCSSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTEE
T ss_pred -CcceeEEeccCcCccCceECCCCCEEEEEecC---CCeEEEEECCCCeE
Confidence 3332 223466678899999999988766542 67899999988764
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.59 E-value=4.4e-13 Score=121.97 Aligned_cols=165 Identities=9% Similarity=-0.001 Sum_probs=122.0
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCC-cEEecCCCCceEEEEeCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP-LVKFGGHKDEGYAIDWNPI 240 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~sp~ 240 (359)
..+...+ .++|+|++..++++...++.|.+||+.. ... ...+..+.....+++|+|+
T Consensus 37 ~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~s~d 94 (331)
T 3u4y_A 37 TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL---------------------EPPKVVAIQEGQSSMADVDITPD 94 (331)
T ss_dssp ECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS---------------------SSCEEEEEEECSSCCCCEEECTT
T ss_pred EccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC---------------------CceeEEecccCCCCccceEECCC
Confidence 3455666 9999999965777777799999999987 344 5566666666666999999
Q ss_pred CCCeEEEEcCCC---cEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCc-EEEEECCCCCCce---
Q 018235 241 TTGRLVTGDCNS---CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH-IAIWDTRVGKSAL--- 313 (359)
Q Consensus 241 ~~~~l~sgs~dg---~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~-I~iwD~r~~~~~~--- 313 (359)
+. +|+++..++ .|.+||+.+ +... ..+. +.....+++|+|++..+++++..++. |.+|++... ..+
T Consensus 95 g~-~l~~~~~~~~~~~i~v~d~~~-~~~~---~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~-g~~~~~ 167 (331)
T 3u4y_A 95 DQ-FAVTVTGLNHPFNMQSYSFLK-NKFI---STIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD-GVLFDT 167 (331)
T ss_dssp SS-EEEECCCSSSSCEEEEEETTT-TEEE---EEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT-CCEEEE
T ss_pred CC-EEEEecCCCCcccEEEEECCC-CCeE---EEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCC-CcEeec
Confidence 98 777555553 899999976 4433 2333 34567899999999878888888888 999999865 222
Q ss_pred -EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 314 -TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 314 -~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.........+..++|+|++++++..... ++.|.+|+..++++
T Consensus 168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 168 GQEFISGGTRPFNITFTPDGNFAFVANLI---GNSIGILETQNPEN 210 (331)
T ss_dssp EEEEECSSSSEEEEEECTTSSEEEEEETT---TTEEEEEECSSTTS
T ss_pred CCccccCCCCccceEECCCCCEEEEEeCC---CCeEEEEECCCCcc
Confidence 1222345568999999999977665532 67899999987764
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.58 E-value=7.1e-14 Score=141.56 Aligned_cols=161 Identities=8% Similarity=0.080 Sum_probs=118.0
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCC--CcEEecCCCCceEEEEeCCCCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS--PLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
..|..++|+|++ ..|++++. +.|++||+.. .. ....+..|...+.+++|||++.
T Consensus 109 ~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~---------------------~~~~~~~~l~~~~~~~~~~~~SPDG~- 164 (741)
T 2ecf_A 109 TGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQ---------------------EGKAAVRQLTHGEGFATDAKLSPKGG- 164 (741)
T ss_dssp EESCCCEECTTS-SEEEEEET-TEEEEEESSS---------------------CSTTSCCBCCCSSSCEEEEEECTTSS-
T ss_pred cCcceeEECCCC-CEEEEEeC-CcEEEEECCC---------------------CCcceEEEcccCCcccccccCCCCCC-
Confidence 458899999999 66666665 9999999986 21 2334667777899999999998
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCC----------------eEEEEecCCCCCEEEEEeCCC--------
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSAS----------------VEDLQWSPTEPDVFASCSVDG-------- 299 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~----------------V~~v~~sp~~~~~las~s~Dg-------- 299 (359)
+|++++ ++.|++||+.. +... .....+... +..++|||++. .|++++.|+
T Consensus 165 ~la~~~-~~~i~~~d~~~-g~~~---~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~ 238 (741)
T 2ecf_A 165 FVSFIR-GRNLWVIDLAS-GRQM---QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKR 238 (741)
T ss_dssp EEEEEE-TTEEEEEETTT-TEEE---ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEE
T ss_pred EEEEEe-CCcEEEEecCC-CCEE---EeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEec
Confidence 888887 56999999976 4332 112222222 47799999999 677776655
Q ss_pred -------------------------cEEEEECCC-CCCceEEee--cCCCCEEEEEEcCCCCeEEEEeee-cccceEEEE
Q 018235 300 -------------------------HIAIWDTRV-GKSALTSFK--AHNADVNVISWNRCWLAVCWHLEV-MMEHFLFMI 350 (359)
Q Consensus 300 -------------------------~I~iwD~r~-~~~~~~~~~--~h~~~V~~i~~s~~~~~l~~~~~~-~~~d~~i~i 350 (359)
.|++||+.+ + ....... .|...+..++| |+|+.|++.... ...+..|.+
T Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~ 316 (741)
T 2ecf_A 239 YEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA-QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVE 316 (741)
T ss_dssp EEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC-CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEE
T ss_pred CCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC-ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEE
Confidence 789999988 6 4332222 47778999999 999998876542 234678999
Q ss_pred EeCcCCcc
Q 018235 351 LDCSRGEI 358 (359)
Q Consensus 351 wd~~~g~v 358 (359)
||..++.+
T Consensus 317 ~d~~~g~~ 324 (741)
T 2ecf_A 317 VTLASNQQ 324 (741)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 99887753
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.58 E-value=1.4e-13 Score=125.35 Aligned_cols=168 Identities=13% Similarity=0.132 Sum_probs=114.6
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
...+.+..++|+|++..+++++..++.|.+||+... . ....+..+..+. .+.+++|+|++.
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~-----------------~~~~~~~~~~~~-~~~~~~~s~dg~ 141 (343)
T 1ri6_A 81 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG-L-----------------PVGVVDVVEGLD-GCHSANISPDNR 141 (343)
T ss_dssp ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT-E-----------------EEEEEEEECCCT-TBCCCEECTTSS
T ss_pred ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC-c-----------------cccccccccCCC-CceEEEECCCCC
Confidence 334588999999999556666667899999999420 0 023334444433 588999999998
Q ss_pred CeEEEEc-CCCcEEEEecCCCCcceecCc--cccC-CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCc---eEE
Q 018235 243 GRLVTGD-CNSCIYLWEPASDATWNVDPN--PFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA---LTS 315 (359)
Q Consensus 243 ~~l~sgs-~dg~I~lwd~~~~~~~~~~~~--~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~---~~~ 315 (359)
+|++++ .++.|++|++...+.... .. .+.. ....+..++|+|++..+++++..++.|++||+...... ...
T Consensus 142 -~l~~~~~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~ 219 (343)
T 1ri6_A 142 -TLWVPALKQDRICLFTVSDDGHLVA-QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT 219 (343)
T ss_dssp -EEEEEEGGGTEEEEEEECTTSCEEE-EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEE
T ss_pred -EEEEecCCCCEEEEEEecCCCceee-ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEee
Confidence 666665 899999999976333221 01 1222 34578899999999855566668999999999642111 222
Q ss_pred ee----cC--CCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 316 FK----AH--NADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 316 ~~----~h--~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+. .+ ...+..++|+|+++++++... .++.|.+|+..
T Consensus 220 ~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~---~~~~i~v~d~~ 261 (343)
T 1ri6_A 220 LDMMPENFSDTRWAADIHITPDGRHLYACDR---TASLITVFSVS 261 (343)
T ss_dssp EECSCTTCCSCCCEEEEEECTTSSEEEEEET---TTTEEEEEEEC
T ss_pred ccccCccccccCCccceEECCCCCEEEEEec---CCCEEEEEEEc
Confidence 22 11 235678999999998876653 27889999987
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.57 E-value=1.8e-13 Score=124.65 Aligned_cols=172 Identities=6% Similarity=-0.075 Sum_probs=115.2
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
.....|.+.+..++|+|++..+++++..++.|.+|++..... ....+..+..+. .+.+++|+
T Consensus 31 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~-----------------~~~~~~~~~~~~-~~~~~~~s 92 (343)
T 1ri6_A 31 TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG-----------------ALTFAAESALPG-SLTHISTD 92 (343)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC-----------------CEEEEEEEECSS-CCSEEEEC
T ss_pred eeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCC-----------------ceeeccccccCC-CCcEEEEc
Confidence 445678899999999999944444444459999999973100 012233444444 67899999
Q ss_pred CCCCCeEE-EEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceE---
Q 018235 239 PITTGRLV-TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT--- 314 (359)
Q Consensus 239 p~~~~~l~-sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~--- 314 (359)
|++. +|+ ++..++.|.+||+.. +........+. ....+.+++|+|++..+++++..++.|++||+........
T Consensus 93 ~dg~-~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 169 (343)
T 1ri6_A 93 HQGQ-FVFVGSYNAGNVSVTRLED-GLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP 169 (343)
T ss_dssp TTSS-EEEEEETTTTEEEEEEEET-TEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred CCCC-EEEEEecCCCeEEEEECCC-Ccccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc
Confidence 9998 554 455588999999952 22111112333 3346889999999984444444899999999987313221
Q ss_pred -Eeec-CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 315 -SFKA-HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 315 -~~~~-h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.+.. ....+..++|+|++.++++... .++.+.+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~~pdg~~l~~~~~---~~~~i~~~~~~ 208 (343)
T 1ri6_A 170 AEVTTVEGAGPRHMVFHPNEQYAYCVNE---LNSSVDVWELK 208 (343)
T ss_dssp EEEECSTTCCEEEEEECTTSSEEEEEET---TTTEEEEEESS
T ss_pred cccccCCCCCcceEEECCCCCEEEEEeC---CCCEEEEEEec
Confidence 2222 3457899999999997766643 26789999984
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.57 E-value=8.8e-13 Score=120.72 Aligned_cols=165 Identities=10% Similarity=0.028 Sum_probs=124.3
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC---------ceE
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD---------EGY 233 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~ 233 (359)
.+...+..+.|+|++..++++...++.|.+||... .+.+..+..+.. ...
T Consensus 86 ~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 144 (353)
T 3vgz_A 86 HNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT---------------------GEVKGRLVLDDRKRTEEVRPLQPR 144 (353)
T ss_dssp EESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT---------------------CCEEEEEESCCCCCCSSCCCCEEE
T ss_pred ecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC---------------------CeeEEEEecCCCccccccCCCCCc
Confidence 34556889999999966788888889999999986 344444444332 268
Q ss_pred EEEeCCCCCCeEEEEc--CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 234 AIDWNPITTGRLVTGD--CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs--~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
++.|+|++. ++++++ .++.|.+||+.+ ++.. ..+..+...+.+++|+|++. .+++++.++.|.+||+.++ .
T Consensus 145 ~~~~s~dg~-~l~~~~~~~~~~i~~~d~~~-~~~~---~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~i~~~d~~~~-~ 217 (353)
T 3vgz_A 145 ELVADDATN-TVYISGIGKESVIWVVDGGN-IKLK---TAIQNTGKMSTGLALDSEGK-RLYTTNADGELITIDTADN-K 217 (353)
T ss_dssp EEEEETTTT-EEEEEEESSSCEEEEEETTT-TEEE---EEECCCCTTCCCCEEETTTT-EEEEECTTSEEEEEETTTT-E
T ss_pred eEEECCCCC-EEEEEecCCCceEEEEcCCC-CceE---EEecCCCCccceEEECCCCC-EEEEEcCCCeEEEEECCCC-e
Confidence 899999998 555554 578999999976 4433 33444555688899999999 7888888999999999987 5
Q ss_pred ceEEeec----CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 312 ALTSFKA----HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 312 ~~~~~~~----h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.+..+.. +...+..++|+|++..++.... .++.|.+||..++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 218 ILSRKKLLDDGKEHFFINISLDTARQRAFITDS---KAAEVLVVDTRNGNI 265 (353)
T ss_dssp EEEEEECCCSSSCCCEEEEEEETTTTEEEEEES---SSSEEEEEETTTCCE
T ss_pred EEEEEEcCCCCCCcccceEEECCCCCEEEEEeC---CCCEEEEEECCCCcE
Confidence 5555543 5567889999999998776654 257899999987764
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.55 E-value=2.3e-12 Score=118.24 Aligned_cols=170 Identities=8% Similarity=0.012 Sum_probs=117.0
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC-CceEEEEeCCCCCCe
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK-DEGYAIDWNPITTGR 244 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~ 244 (359)
..+.+++|+|++. ++++...++.|++|++..... ...+..+..+. .....++|+|++..+
T Consensus 141 ~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~------------------~~~~~~~~~~~g~~p~~~~~spdg~~l 201 (347)
T 3hfq_A 141 SHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQ------------------LSEQSVLTMEAGFGPRHLVFSPDGQYA 201 (347)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSC------------------EEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred CCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCc------------------EEEeeeEEcCCCCCCceEEECCCCCEE
Confidence 3588999999995 888888899999999984100 01112222222 356789999999844
Q ss_pred EEEEcCCCcEEEEecCCC-CcceecCccccCCC------CCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC--CceEE
Q 018235 245 LVTGDCNSCIYLWEPASD-ATWNVDPNPFIGHS------ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK--SALTS 315 (359)
Q Consensus 245 l~sgs~dg~I~lwd~~~~-~~~~~~~~~~~~h~------~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~--~~~~~ 315 (359)
++++..++.|.+|++... +.... ...+.... ..+..++|+|++..+++++..++.|.+|++.... ..+..
T Consensus 202 ~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 202 FLAGELSSQIASLKYDTQTGAFTQ-LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEE-EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCceEE-eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 555677899999998741 22210 11122111 4588999999999566778889999999997321 23444
Q ss_pred eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEE--eCcCCcc
Q 018235 316 FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMIL--DCSRGEI 358 (359)
Q Consensus 316 ~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iw--d~~~g~v 358 (359)
+..+...+..++|+|++++|+..... ++.+.+| +..+|.+
T Consensus 281 ~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 281 ISTEGDFPRDFDLDPTEAFVVVVNQN---TDNATLYARDLTSGKL 322 (347)
T ss_dssp EECSSSCCCEEEECTTSSEEEEEETT---TTEEEEEEECTTTCCE
T ss_pred EecCCCCcCeEEECCCCCEEEEEEcC---CCcEEEEEEeCCCCeE
Confidence 56666778999999999988777542 5789999 6666653
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.53 E-value=1.7e-12 Score=117.75 Aligned_cols=156 Identities=9% Similarity=-0.013 Sum_probs=109.9
Q ss_pred ceeeEEEeCCCCcEEEEEe------------CCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEE
Q 018235 167 CVNRIRAMTQNPHICASWA------------DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s------------~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 234 (359)
.+..++|+|++ ..+++++ .++.|.+||+.. .+.+..+.. ...+.+
T Consensus 83 ~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~---------------------~~~~~~~~~-~~~~~~ 139 (337)
T 1pby_B 83 SLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAET---------------------LSRRKAFEA-PRQITM 139 (337)
T ss_dssp CTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTT---------------------TEEEEEEEC-CSSCCC
T ss_pred cccceEECCCC-CEEEEEecccccccccccccCceEEEEECCC---------------------CcEEEEEeC-CCCcce
Confidence 67889999999 4555554 579999999976 333444433 335678
Q ss_pred EEeCCCCCCeEEEEcCCCcEEEEecCCCCccee--cC----c--------------------------------------
Q 018235 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNV--DP----N-------------------------------------- 270 (359)
Q Consensus 235 l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~--~~----~-------------------------------------- 270 (359)
++|+|++. +|+++ ++.|++||+.++ +... .. .
T Consensus 140 ~~~s~dg~-~l~~~--~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (337)
T 1pby_B 140 LAWARDGS-KLYGL--GRDLHVMDPEAG-TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215 (337)
T ss_dssp EEECTTSS-CEEEE--SSSEEEEETTTT-EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGG
T ss_pred eEECCCCC-EEEEe--CCeEEEEECCCC-cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccccccc
Confidence 89999998 67776 588999998753 2110 00 0
Q ss_pred -------------------cccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCC
Q 018235 271 -------------------PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRC 331 (359)
Q Consensus 271 -------------------~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~ 331 (359)
.+..+...+.+++|+|++. .++++ ++.|++||+.++ +.+..+.. ...+.+++|+|+
T Consensus 216 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~-~~~~~~~~-~~~~~~~~~s~d 290 (337)
T 1pby_B 216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKN-ASIKRVPL-PHSYYSVNVSTD 290 (337)
T ss_dssp GEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTT-EEEEEEEC-SSCCCEEEECTT
T ss_pred ccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCC-cCcceecC-CCceeeEEECCC
Confidence 0111223456799999998 66666 799999999986 55555543 345789999999
Q ss_pred CCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 332 WLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 332 ~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
++.++.+.. ++.|.+|+..++++
T Consensus 291 g~~l~~~~~----~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 291 GSTVWLGGA----LGDLAAYDAETLEK 313 (337)
T ss_dssp SCEEEEESB----SSEEEEEETTTCCE
T ss_pred CCEEEEEcC----CCcEEEEECcCCcE
Confidence 998877643 78899999988763
No 144
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.52 E-value=6.7e-14 Score=141.40 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=109.9
Q ss_pred ceeeEEEeCCCCcEEEEEeC---------CCcEEEEECCCCccccccccccccCCCCCCCCCCCc--EEecCCCCceEEE
Q 018235 167 CVNRIRAMTQNPHICASWAD---------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL--VKFGGHKDEGYAI 235 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~---------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~l 235 (359)
.|.+++|+|+| ..||+++. ++.|++||+... +.+ ..+ ...+..+
T Consensus 61 ~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g---------------------~~~~~~~l---~~~~~~~ 115 (719)
T 1z68_A 61 NASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNG---------------------EFVRGNEL---PRPIQYL 115 (719)
T ss_dssp TCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTT---------------------EECCSSCC---CSSBCCE
T ss_pred ceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCC---------------------ccccceec---Ccccccc
Confidence 38999999999 66666655 689999999862 110 111 2357889
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCe-----------------EEEEecCCCCCEEEEEeCC
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASV-----------------EDLQWSPTEPDVFASCSVD 298 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V-----------------~~v~~sp~~~~~las~s~D 298 (359)
+|||+|+ .||++. ++.|++|++..+ .... ....++...| .+++|||+|+ .||+++.|
T Consensus 116 ~~SPDG~-~la~~~-~~~i~~~~~~~g-~~~~--l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d 189 (719)
T 1z68_A 116 CWSPVGS-KLAYVY-QNNIYLKQRPGD-PPFQ--ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFN 189 (719)
T ss_dssp EECSSTT-CEEEEE-TTEEEEESSTTS-CCEE--CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEE
T ss_pred eECCCCC-EEEEEE-CCeEEEEeCCCC-CcEE--EecCCCcCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEEC
Confidence 9999998 888886 789999999763 3221 1112332222 4899999999 88887755
Q ss_pred C----------------------------------cEEEEECCCCCCce--EE------eecCCCCEEEEEEcCCCCeEE
Q 018235 299 G----------------------------------HIAIWDTRVGKSAL--TS------FKAHNADVNVISWNRCWLAVC 336 (359)
Q Consensus 299 g----------------------------------~I~iwD~r~~~~~~--~~------~~~h~~~V~~i~~s~~~~~l~ 336 (359)
. .|++||+.++ ... .. +..|...+..++|+|++.+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~ 268 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP-AYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCL 268 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH-HHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC-CccceeEccCCccCCCCcceEEEeEEeCCCeEEE
Confidence 2 7889999876 332 12 235777899999999987665
Q ss_pred EEeeecccceEEEEEe----CcCCcc
Q 018235 337 WHLEVMMEHFLFMILD----CSRGEI 358 (359)
Q Consensus 337 ~~~~~~~~d~~i~iwd----~~~g~v 358 (359)
...........|.+|+ ..+|..
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred EEeccccCeEEEEEEcccCCCCCCce
Confidence 5433222235688888 766553
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.52 E-value=2.8e-13 Score=137.18 Aligned_cols=145 Identities=10% Similarity=0.102 Sum_probs=107.2
Q ss_pred CCceeeEEEeCCCCcEEEEEeC-CC-----cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC---------
Q 018235 165 QGCVNRIRAMTQNPHICASWAD-TG-----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK--------- 229 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~-dg-----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--------- 229 (359)
...|+.++|+|+| ..|++++. +| .|++||+... +....+..+.
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g---------------------~~~~~~~~~~~~~~~~~~~ 93 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSG---------------------QTRLLVDSKVVLPGTETLS 93 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTC---------------------CEEEEECGGGTC-------
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCC---------------------ceeEccchhhccccccccc
Confidence 4578999999999 67777777 88 8999999762 2222222111
Q ss_pred ---------------CceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCC--cceecCccccCCCCCeEEEEecCCCCCEE
Q 018235 230 ---------------DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA--TWNVDPNPFIGHSASVEDLQWSPTEPDVF 292 (359)
Q Consensus 230 ---------------~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~--~~~~~~~~~~~h~~~V~~v~~sp~~~~~l 292 (359)
..+.+++|||+++ +|++++. +.|++||+..+. .. ..+..|...+.+++|||++. .|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~~~----~~l~~~~~~~~~~~~SPDG~-~l 166 (741)
T 2ecf_A 94 DEEKARRERQRIAAMTGIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKAAV----RQLTHGEGFATDAKLSPKGG-FV 166 (741)
T ss_dssp -------------CCEESCCCEECTTSS-EEEEEET-TEEEEEESSSCSTTSC----CBCCCSSSCEEEEEECTTSS-EE
T ss_pred chhhhhhhhhhhccccCcceeEECCCCC-EEEEEeC-CcEEEEECCCCCcceE----EEcccCCcccccccCCCCCC-EE
Confidence 2377899999998 8888875 999999997631 22 45677888999999999999 88
Q ss_pred EEEeCCCcEEEEECCCCCCceEEeecCCCC----------------EEEEEEcCCCCeEEEEee
Q 018235 293 ASCSVDGHIAIWDTRVGKSALTSFKAHNAD----------------VNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 293 as~s~Dg~I~iwD~r~~~~~~~~~~~h~~~----------------V~~i~~s~~~~~l~~~~~ 340 (359)
|+++ ++.|++||+.++ ........+... +..++|+|+|+.|++...
T Consensus 167 a~~~-~~~i~~~d~~~g-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 167 SFIR-GRNLWVIDLASG-RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EEEE-TTEEEEEETTTT-EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EEEe-CCcEEEEecCCC-CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 8877 468999999886 333222333322 477999999999888754
No 146
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.51 E-value=2.1e-12 Score=126.60 Aligned_cols=225 Identities=10% Similarity=0.048 Sum_probs=148.6
Q ss_pred CCceeeeChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCC
Q 018235 46 EGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNK 125 (359)
Q Consensus 46 ~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~ 125 (359)
++....+|......+.++.+.-....+.+-||. .+|+++.. ++.|.++++..
T Consensus 158 d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg-----------~~l~v~~~-----d~~V~v~D~~~------------ 209 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKVIDTGYAVHISRMSASG-----------RYLLVIGR-----DARIDMIDLWA------------ 209 (543)
T ss_dssp GTEEEEEETTTCCEEEEEECSTTEEEEEECTTS-----------CEEEEEET-----TSEEEEEETTS------------
T ss_pred CCeEEEEECCCceEEEEEecCcccceEEECCCC-----------CEEEEECC-----CCeEEEEECcC------------
Confidence 344555665555555555544444566666764 35555552 37899998710
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEeC----CCCcEEEEEe-CCCcEEEEECCCCcc
Q 018235 126 PSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMT----QNPHICASWA-DTGHVQVWDLRSHLN 200 (359)
Q Consensus 126 ~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p----~~~~~lat~s-~dg~V~iwd~~~~~~ 200 (359)
....+.. .+.+...+..++|+| ++ .++++++ .+++|.|||...
T Consensus 210 ---------------------------~t~~~~~-~i~~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t--- 257 (543)
T 1nir_A 210 ---------------------------KEPTKVA-EIKIGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGET--- 257 (543)
T ss_dssp ---------------------------SSCEEEE-EEECCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTT---
T ss_pred ---------------------------CCCcEEE-EEecCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccc---
Confidence 0223323 334667789999999 99 5555555 689999999876
Q ss_pred ccccccccccCCCCCCCCCCCcEEecC----------CCC-ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecC
Q 018235 201 ALAESETIVGQGAPQVSNQSPLVKFGG----------HKD-EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP 269 (359)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h~~-~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~ 269 (359)
.+++.++.. |.. .+.++.++|++..++++...++.|.+||+.......
T Consensus 258 ------------------~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~--- 316 (543)
T 1nir_A 258 ------------------LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT--- 316 (543)
T ss_dssp ------------------CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE---
T ss_pred ------------------cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce---
Confidence 444554443 222 688999999888688889999999999997633222
Q ss_pred ccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec----CCCCEEEEEEcCCCCeEEEEeeecccc
Q 018235 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA----HNADVNVISWNRCWLAVCWHLEVMMEH 345 (359)
Q Consensus 270 ~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~----h~~~V~~i~~s~~~~~l~~~~~~~~~d 345 (359)
.....+...+.++.|+|++..+++++..+++|.+||+.++ +.+..+.. |......+ ++|++..+..... ..+
T Consensus 317 ~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~--~~d 392 (543)
T 1nir_A 317 VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH--LGD 392 (543)
T ss_dssp EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB--SSS
T ss_pred eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCCCccEEEecc--CCC
Confidence 1122356678899999999955666777999999999997 66666653 65433333 4677444333321 126
Q ss_pred eEEEEEeCcC
Q 018235 346 FLFMILDCSR 355 (359)
Q Consensus 346 ~~i~iwd~~~ 355 (359)
+.|.+|+..+
T Consensus 393 ~~V~v~d~~~ 402 (543)
T 1nir_A 393 GSISLIGTDP 402 (543)
T ss_dssp SEEEEEECCT
T ss_pred ceEEEEEeCC
Confidence 7899999876
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.51 E-value=7.3e-13 Score=139.57 Aligned_cols=163 Identities=7% Similarity=0.000 Sum_probs=129.8
Q ss_pred ecCCCceeeEEEe-CCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC-ceEEEEeCC
Q 018235 162 VAHQGCVNRIRAM-TQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-EGYAIDWNP 239 (359)
Q Consensus 162 ~~H~~~V~~i~~~-p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~sp 239 (359)
..|.+.+..++|+ |++ ..+|+++ ++.|.+|++.. . ....+..|.. .+.+++|+
T Consensus 292 ~~~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~---------------------~-~~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 292 IISIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSG---------------------T-YVLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp EEECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTS---------------------S-BEEECSCCSCEEEEEECSS-
T ss_pred cccccccceeeecCCCC-CEEEEEE-cCEEEEEcCCC---------------------C-ceEEccCCCcceEEeeeEc-
Confidence 3577889999999 999 5666655 78999999875 2 2334667777 89999999
Q ss_pred CCCCeEEEEcCCCcEE-EEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec
Q 018235 240 ITTGRLVTGDCNSCIY-LWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 240 ~~~~~l~sgs~dg~I~-lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (359)
++. .|++++.++.|. +|++.. +.. ..+.+|...+..++|+|++. .|++++.++.|++||+.++ .....+..
T Consensus 347 dg~-~l~~~s~~~~l~~~~d~~~-~~~----~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg-~~~~~~~~ 418 (1045)
T 1k32_A 347 TKV-AFIHGTREGDFLGIYDYRT-GKA----EKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETG-KPTVIERS 418 (1045)
T ss_dssp SEE-EEEEEETTEEEEEEEETTT-CCE----EECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTC-CEEEEEEC
T ss_pred CCC-eEEEEECCCceEEEEECCC-CCc----eEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCC-ceEEeccC
Confidence 887 888888788888 889865 332 23447888999999999999 9999999999999999987 55555568
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeec------ccceEEEEEeCcCCc
Q 018235 319 HNADVNVISWNRCWLAVCWHLEVM------MEHFLFMILDCSRGE 357 (359)
Q Consensus 319 h~~~V~~i~~s~~~~~l~~~~~~~------~~d~~i~iwd~~~g~ 357 (359)
|...+.+++|+|+|++|++..... ..+..|.+|+..++.
T Consensus 419 ~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 419 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 989999999999999998876532 234689999988765
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=2.7e-12 Score=117.82 Aligned_cols=201 Identities=7% Similarity=0.031 Sum_probs=136.4
Q ss_pred eEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEE-EEEecCCCc
Q 018235 89 TAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQ-LRKVAHQGC 167 (359)
Q Consensus 89 ~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~H~~~ 167 (359)
.+++.+|+.+.. ....|.|+.+.. ....+. .....+...
T Consensus 2 ~~~~~vg~y~~~-~~~~i~v~~~d~---------------------------------------~tg~~~~~~~~~~~~~ 41 (347)
T 3hfq_A 2 QERILFGTYTKK-TSQGIYQGTLDT---------------------------------------TAKTLTNDGLLAATQN 41 (347)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEET---------------------------------------TTTEEEEEEEEEECSC
T ss_pred CcEEEEEeccCC-CCCCEEEEEEcC---------------------------------------CCCeEEEeeeeeccCC
Confidence 367888988764 355799998830 022332 355667788
Q ss_pred eeeEEEeCCCCcEEEEEeC--CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 168 VNRIRAMTQNPHICASWAD--TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~--dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
+..++|+|++ .++++... ++.|++|++.... ...+..+..+...+.+++|+|++. +|
T Consensus 42 p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~-------------------~~~~~~~~~~~~~p~~~a~spdg~-~l 100 (347)
T 3hfq_A 42 PTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQT-------------------AHKLNTVVAPGTPPAYVAVDEARQ-LV 100 (347)
T ss_dssp CCCEEECTTC-EEEEEEEETTEEEEEEEEEETTE-------------------EEEEEEEEEESCCCSEEEEETTTT-EE
T ss_pred cceEEEccCC-eEEEEEecCCCceEEEEEecCCc-------------------EEEeeeeecCCCCCEEEEECCCCC-EE
Confidence 8999999999 46555543 7899999996410 123344445666788999999998 67
Q ss_pred EEEc-CCCcEEEEecCCCCcceecCccccC---------CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce--
Q 018235 246 VTGD-CNSCIYLWEPASDATWNVDPNPFIG---------HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL-- 313 (359)
Q Consensus 246 ~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~---------h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~-- 313 (359)
++++ .++.|.+|++...+.... ...+.. +...+.+++|+|++. +++++..++.|++||+.......
T Consensus 101 ~~~~~~~~~v~v~~~~~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 101 YSANYHKGTAEVMKIAADGALTL-TDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEE-EEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEeCCCCEEEEEEeCCCCCeee-cceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEe
Confidence 7666 789999999964333221 111111 223588999999999 99988889999999998321221
Q ss_pred EEeec-CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 314 TSFKA-HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 314 ~~~~~-h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
..+.. ....+..++|+|+|++++..... ++.+.+|+...
T Consensus 179 ~~~~~~~g~~p~~~~~spdg~~l~v~~~~---~~~v~v~~~~~ 218 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDGQYAFLAGEL---SSQIASLKYDT 218 (347)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETT---TTEEEEEEEET
T ss_pred eeEEcCCCCCCceEEECCCCCEEEEEeCC---CCEEEEEEecC
Confidence 12222 23468899999999977665432 66788887653
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.50 E-value=6e-13 Score=140.22 Aligned_cols=149 Identities=11% Similarity=-0.003 Sum_probs=120.3
Q ss_pred EEecCCC-ceeeEEEeCCCCcEEEEEeCCCcEE-EEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEe
Q 018235 160 RKVAHQG-CVNRIRAMTQNPHICASWADTGHVQ-VWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (359)
Q Consensus 160 ~~~~H~~-~V~~i~~~p~~~~~lat~s~dg~V~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (359)
.+..|.+ .+..++|+ ++ ..+++++.++.+. +|++.. .. ...+.+|...+.+++|
T Consensus 331 ~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~---------------------~~-~~~l~~~~~~~~~~~~ 386 (1045)
T 1k32_A 331 KVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRT---------------------GK-AEKFEENLGNVFAMGV 386 (1045)
T ss_dssp ECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTT---------------------CC-EEECCCCCCSEEEEEE
T ss_pred EccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCC---------------------CC-ceEecCCccceeeeEE
Confidence 3456777 89999999 87 6777778788888 888875 22 2344478789999999
Q ss_pred CCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCC----------cEEEEECC
Q 018235 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG----------HIAIWDTR 307 (359)
Q Consensus 238 sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg----------~I~iwD~r 307 (359)
||++. +|++++.++.|++||+.+ +... ..+.+|...|.+++|||++. .|++++.++ .|++||+.
T Consensus 387 SpDG~-~la~~~~~~~v~~~d~~t-g~~~---~~~~~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 387 DRNGK-FAVVANDRFEIMTVDLET-GKPT---VIERSREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp CTTSS-EEEEEETTSEEEEEETTT-CCEE---EEEECSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCCCC-EEEEECCCCeEEEEECCC-CceE---EeccCCCCCccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECC
Confidence 99998 999999999999999977 4433 33447888999999999999 777776544 89999999
Q ss_pred CCCCceEEeecCCCCEEEEEEcCCCCeEEEEee
Q 018235 308 VGKSALTSFKAHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 308 ~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
++ . +..+..|...+..++|+|+|+.|++...
T Consensus 461 ~g-~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 461 GR-K-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TT-E-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CC-c-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 86 3 6677788888999999999999988764
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.46 E-value=6.2e-12 Score=114.01 Aligned_cols=113 Identities=11% Similarity=0.112 Sum_probs=83.1
Q ss_pred ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC-C----CCceEEEEeCCCC
Q 018235 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-H----KDEGYAIDWNPIT 241 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h----~~~v~~l~~sp~~ 241 (359)
.+..++|+|++..+++++..++.|.+||+.. .+.+..+.. + ...+.+++|+|++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~s~dg 93 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT---------------------GETLGRIDLSTPEERVKSLFGAALSPDG 93 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTT---------------------CCEEEEEECCBTTEEEECTTCEEECTTS
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCC---------------------CCeEeeEEcCCcccccccccceEECCCC
Confidence 5889999999966778888899999999976 333433332 1 1246689999999
Q ss_pred CCeEEEEc------------CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCC
Q 018235 242 TGRLVTGD------------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (359)
Q Consensus 242 ~~~l~sgs------------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (359)
. +|++++ .++.|.+||+.+ ++.. ..+. ....+.+++|+|++. .|+++ ++.|++||+.++
T Consensus 94 ~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~---~~~~-~~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~ 164 (337)
T 1pby_B 94 K-TLAIYESPVRLELTHFEVQPTRVALYDAET-LSRR---KAFE-APRQITMLAWARDGS-KLYGL--GRDLHVMDPEAG 164 (337)
T ss_dssp S-EEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEE---EEEE-CCSSCCCEEECTTSS-CEEEE--SSSEEEEETTTT
T ss_pred C-EEEEEecccccccccccccCceEEEEECCC-CcEE---EEEe-CCCCcceeEECCCCC-EEEEe--CCeEEEEECCCC
Confidence 8 777775 579999999976 4433 2232 245678899999998 44444 688999999876
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.46 E-value=3.3e-13 Score=136.18 Aligned_cols=146 Identities=11% Similarity=0.087 Sum_probs=109.2
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC---ceEEEEeCCCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD---EGYAIDWNPITT 242 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~sp~~~ 242 (359)
..+..++|+|++ .++++ +.+|+|++||+.. .+....+.+|.. .+.+++|||+++
T Consensus 17 ~~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~---------------------g~~~~~~~~~~~~~~~v~~~~~SpDg~ 73 (723)
T 1xfd_A 17 IHDPEAKWISDT-EFIYR-EQKGTVRLWNVET---------------------NTSTVLIEGKKIESLRAIRYEISPDRE 73 (723)
T ss_dssp CCCCCCCBSSSS-CBCCC-CSSSCEEEBCGGG---------------------CCCEEEECTTTTTTTTCSEEEECTTSS
T ss_pred ccccccEEcCCC-cEEEE-eCCCCEEEEECCC---------------------CcEEEEeccccccccccceEEECCCCC
Confidence 346788999999 56666 7899999999987 455566666664 489999999998
Q ss_pred CeEEEEcCC---------CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 243 GRLVTGDCN---------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 243 ~~l~sgs~d---------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
+|++++.+ +.|++||+.++ ... .+....+|...+..++|||+|. .||+++. +.|++||+.++ ...
T Consensus 74 -~l~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~-~l~~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~g-~~~ 147 (723)
T 1xfd_A 74 -YALFSYNVEPIYQHSYTGYYVLSKIPHG-DPQ-SLDPPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVGK-QAI 147 (723)
T ss_dssp -EEEEEESCCCCSSSCCCSEEEEEESSSC-CCE-ECCCTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSSS-CCE
T ss_pred -EEEEEecCccceeecceeeEEEEECCCC-ceE-eccCCccccccccccEECCCCC-EEEEEEC-CeEEEEECCCC-ceE
Confidence 88888764 78889999873 321 1233345666689999999999 7777776 79999999886 444
Q ss_pred EEeecCCCCE------------------EEEEEcCCCCeEEEEee
Q 018235 314 TSFKAHNADV------------------NVISWNRCWLAVCWHLE 340 (359)
Q Consensus 314 ~~~~~h~~~V------------------~~i~~s~~~~~l~~~~~ 340 (359)
.....+...+ .+++|+|+|+.|++...
T Consensus 148 ~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 148 RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 3333333333 78999999999887754
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.46 E-value=4.4e-12 Score=127.73 Aligned_cols=166 Identities=8% Similarity=0.041 Sum_probs=119.1
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCC-----cEEEEECCCCccccccccccccCCCCCCCCCCCcEEec--CCC---Cce
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTG-----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--GHK---DEG 232 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg-----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~---~~v 232 (359)
.|...+.++.|+|++ ..|++++.++ .|++||+.. ......+. .+. ..+
T Consensus 255 ~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v~~~d~~~---------------------g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDE-NILYVAEVNRAQNECKVNAYDAET---------------------GRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CTTCEEEEEEECTTS-SEEEEEEECTTSCEEEEEEEETTT---------------------CCEEEEEEEEECSSCCCCC
T ss_pred CCceeEeeEEEECCC-CEEEEEEeCCCCCeeEEEEEECCC---------------------CceeeEEEEccCCCeECcc
Confidence 577889999999999 5666655554 899999876 21111111 111 124
Q ss_pred EEEEeCC--CCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEE-EEecCCCCCEEEEEeCCC----cEEEEE
Q 018235 233 YAIDWNP--ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVED-LQWSPTEPDVFASCSVDG----HIAIWD 305 (359)
Q Consensus 233 ~~l~~sp--~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~-v~~sp~~~~~las~s~Dg----~I~iwD 305 (359)
.++.|+| ++. +|++++.+|.++||.+...+... ..+..|...|.. ++|+|++..++++++.++ .|..||
T Consensus 313 ~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~---~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 313 HPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLI---RQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp SCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEE---EECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred CCceeecCCCCE-EEEEEccCCccEEEEEECCCCEE---EecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 5789999 998 89999999999999886334433 456677778877 799999985556666665 677778
Q ss_pred CCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 306 TRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 306 ~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+.++ . ...+. |...+.+++|+|+++++++..........+.+|+..+++
T Consensus 389 ~~~~-~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 389 IKGG-K-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TTCC-C-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred cCCC-C-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 7765 2 33443 677799999999999998876654445779999987764
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.45 E-value=3.2e-11 Score=111.24 Aligned_cols=204 Identities=10% Similarity=0.026 Sum_probs=134.1
Q ss_pred ceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeE-EEEEecCCC
Q 018235 88 HTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPIL-QLRKVAHQG 166 (359)
Q Consensus 88 ~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~H~~ 166 (359)
...++++||.+.+ ..+.|+++.+.. ....+ ..... |..
T Consensus 12 ~~~~~~vg~y~~~-~~~~i~~~~~d~---------------------------------------~~g~~~~~~~~-~~~ 50 (361)
T 3scy_A 12 SELTMLVGTYTSG-NSKGIYTFRFNE---------------------------------------ETGESLPLSDA-EVA 50 (361)
T ss_dssp GEEEEEEEECCSS-SCCEEEEEEEET---------------------------------------TTCCEEEEEEE-ECS
T ss_pred CceEEEEEeccCC-CCCCEEEEEEeC---------------------------------------CCCCEEEeecc-cCC
Confidence 3578999999875 467899999831 01122 22333 778
Q ss_pred ceeeEEEeCCCCcEEEEEeCC----CcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 167 CVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
....++|+|++ .+|++++.+ |.|.+|++...... ...+..+..+......+++ ++.
T Consensus 51 ~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~-----------------~~~~~~~~~~~~~p~~~~~--dg~ 110 (361)
T 3scy_A 51 NPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGT-----------------LHLLNTQKTMGADPCYLTT--NGK 110 (361)
T ss_dssp CCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTE-----------------EEEEEEEECSSSCEEEEEE--CSS
T ss_pred CCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCc-----------------EEEeeEeccCCCCcEEEEE--CCC
Confidence 88899999999 566666654 89999998762100 1223344445556677888 665
Q ss_pred CeEEEE-cCCCcEEEEecCCCCcceecCcc-----------ccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC
Q 018235 243 GRLVTG-DCNSCIYLWEPASDATWNVDPNP-----------FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (359)
Q Consensus 243 ~~l~sg-s~dg~I~lwd~~~~~~~~~~~~~-----------~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (359)
+|+++ ..++.|.+|++...+.... ... ...+...+.+++|+|++..+++++..++.|++|++....
T Consensus 111 -~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 111 -NIVTANYSGGSITVFPIGQDGALLP-ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp -EEEEEETTTTEEEEEEBCTTSCBCS-CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTC
T ss_pred -EEEEEECCCCEEEEEEeCCCCcCcc-cceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC
Confidence 55544 4688999999976433211 111 111234568899999998566666678999999988652
Q ss_pred C----c-e------EE-eecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 311 S----A-L------TS-FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 311 ~----~-~------~~-~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
. . + .. ...+...+..++|+|+|++++..... ++.|.+|+..++.
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~~~~~g~ 244 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI---GGTVIAFRYADGM 244 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT---TCEEEEEEEETTE
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC---CCeEEEEEecCCc
Confidence 2 1 1 11 23345668899999999988776532 6789999987654
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=4.7e-12 Score=128.59 Aligned_cols=160 Identities=13% Similarity=0.182 Sum_probs=112.3
Q ss_pred eeEEEeCCCCcEEEEEeCC---------CcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC
Q 018235 169 NRIRAMTQNPHICASWADT---------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (359)
Q Consensus 169 ~~i~~~p~~~~~lat~s~d---------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 239 (359)
+.+.|+|++ ..|+.++.+ +.+.+||+.. .+ ...+..|...+...+|||
T Consensus 65 ~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~---------------------~~-~~~l~~~~~~~~~~~~SP 121 (740)
T 4a5s_A 65 NDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNK---------------------RQ-LITEERIPNNTQWVTWSP 121 (740)
T ss_dssp CEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTT---------------------TE-ECCSSCCCTTEEEEEECS
T ss_pred cceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCC---------------------Cc-EEEcccCCCcceeeEECC
Confidence 458899999 566666655 6677999987 22 223556777899999999
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCe-----------------EEEEecCCCCCEEEEEeCCC---
Q 018235 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASV-----------------EDLQWSPTEPDVFASCSVDG--- 299 (359)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V-----------------~~v~~sp~~~~~las~s~Dg--- 299 (359)
+|. .||.+. ++.|++|++..+.... .+..++...+ ..+.|||+|+ .||.++.|.
T Consensus 122 dG~-~la~~~-~~~i~~~~~~~~~~~~---lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v 195 (740)
T 4a5s_A 122 VGH-KLAYVW-NNDIYVKIEPNLPSYR---ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEV 195 (740)
T ss_dssp STT-CEEEEE-TTEEEEESSTTSCCEE---CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTC
T ss_pred CCC-EEEEEE-CCeEEEEECCCCceEE---EcCCCCccceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCC
Confidence 998 888885 7899999987633221 1223333222 3489999999 777765332
Q ss_pred ---------------------------------cEEEEECCC---CCC-ceEEee------cCCCCEEEEEEcCCCCeEE
Q 018235 300 ---------------------------------HIAIWDTRV---GKS-ALTSFK------AHNADVNVISWNRCWLAVC 336 (359)
Q Consensus 300 ---------------------------------~I~iwD~r~---~~~-~~~~~~------~h~~~V~~i~~s~~~~~l~ 336 (359)
.|+|||+.+ +.. ....+. .|...+..++|+|+|++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~ 275 (740)
T 4a5s_A 196 PLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISL 275 (740)
T ss_dssp CEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEE
T ss_pred ceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEE
Confidence 488899887 521 233443 2777799999999999777
Q ss_pred EEeeecccceEEEEEeCcCCc
Q 018235 337 WHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 337 ~~~~~~~~d~~i~iwd~~~g~ 357 (359)
......+....|.+|+..+|+
T Consensus 276 ~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 276 QWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEESSTTEEEEEEEEEETTT
T ss_pred EEeCCCCCEEEEEEEECCCCc
Confidence 666544556689999988775
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=2.6e-11 Score=110.54 Aligned_cols=155 Identities=9% Similarity=0.045 Sum_probs=106.6
Q ss_pred ceeeEEEeCCCCcEEEEEeC------------CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEE
Q 018235 167 CVNRIRAMTQNPHICASWAD------------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~------------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 234 (359)
.+..+.|+|++ ..+++++. ++.|.+||+.... ....+..+..+. .+.+
T Consensus 93 ~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------------------~~~~~~~~~~~~-~~~~ 152 (349)
T 1jmx_B 93 SMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL------------------EAKPVRTFPMPR-QVYL 152 (349)
T ss_dssp CSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG------------------GBCCSEEEECCS-SCCC
T ss_pred cccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCcc------------------ccceeeeccCCC-cccc
Confidence 37899999999 55555554 4899999987521 023334444433 5789
Q ss_pred EEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccC----------------------------------------
Q 018235 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG---------------------------------------- 274 (359)
Q Consensus 235 l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~---------------------------------------- 274 (359)
++|+|++. +++ ++ +.|++||+.++ +... .+..
T Consensus 153 ~~~s~dg~-l~~-~~--~~i~~~d~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 224 (349)
T 1jmx_B 153 MRAADDGS-LYV-AG--PDIYKMDVKTG-KYTV---ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ 224 (349)
T ss_dssp EEECTTSC-EEE-ES--SSEEEECTTTC-CEEE---EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-----
T ss_pred eeECCCCc-EEE-cc--CcEEEEeCCCC-ceec---cccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcC
Confidence 99999997 555 43 34999999763 3221 1100
Q ss_pred ----------------------------CCCCeEEEEecC-CCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEE
Q 018235 275 ----------------------------HSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV 325 (359)
Q Consensus 275 ----------------------------h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~ 325 (359)
+...+..++|+| ++. .++++ ++.|.+||+.++ +.+..+. ....+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~-~~~~~~~-~~~~~~~ 299 (349)
T 1jmx_B 225 DPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQR-KLIKAAN-LDHTYYC 299 (349)
T ss_dssp --CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTT-EEEEEEE-CSSCCCE
T ss_pred CccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccC-eEEEEEc-CCCCccc
Confidence 112456788889 888 66666 889999999986 5555554 3345789
Q ss_pred EEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 326 ISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 326 i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
++|+|++..|+.... ++.|.+||..++++
T Consensus 300 ~~~s~dg~~l~~~~~----~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 300 VAFDKKGDKLYLGGT----FNDLAVFNPDTLEK 328 (349)
T ss_dssp EEECSSSSCEEEESB----SSEEEEEETTTTEE
T ss_pred eEECCCCCEEEEecC----CCeEEEEeccccce
Confidence 999999998877543 68899999987753
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.42 E-value=1.1e-11 Score=114.45 Aligned_cols=172 Identities=10% Similarity=0.021 Sum_probs=113.1
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCC-C------cEEecCCCCceEEEEeC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS-P------LVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~h~~~v~~l~~s 238 (359)
..+.+++|+|++..++++...++.|.+|++....... ..+ . ......+.....+++|+
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~---------------~~~~l~~~~~~~~~~~~~~~~~~~~~~s 219 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANAD---------------NKEKFLTKGTPEAFKVAPGSGPRHLIFN 219 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTT---------------TCCCCEEEEEEEEEECCTTCCEEEEEEC
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcc---------------cccceeecccccceecCCCCCCeEEEEc
Confidence 3457899999996577777778999999987621000 001 1 11122334467799999
Q ss_pred CCCCCeEEEEc-CCCcEEEEecCCCCcce--ecCccccCCCCCeEEEEecCCCCCEEEEEeC-CCcEEEEECCCCC-C--
Q 018235 239 PITTGRLVTGD-CNSCIYLWEPASDATWN--VDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGK-S-- 311 (359)
Q Consensus 239 p~~~~~l~sgs-~dg~I~lwd~~~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~-~-- 311 (359)
|++. +|++++ .++.|.+|++.. +... ........+...+.+++|+|+++.++++... ++.|.+|++.... .
T Consensus 220 pdg~-~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~ 297 (361)
T 3scy_A 220 SDGK-FAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT 297 (361)
T ss_dssp TTSS-EEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE
T ss_pred CCCC-EEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE
Confidence 9998 565554 689999999975 4321 1111223345567899999999944455555 6899999996321 2
Q ss_pred ceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEE--eCcCCcc
Q 018235 312 ALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMIL--DCSRGEI 358 (359)
Q Consensus 312 ~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iw--d~~~g~v 358 (359)
.+..+.. ...+..++|+|+|++|+..... ++.+.+| +..+|.+
T Consensus 298 ~~~~~~~-g~~~~~~~~spdg~~l~~~~~~---~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 298 KVGYQLT-GIHPRNFIITPNGKYLLVACRD---TNVIQIFERDQATGLL 342 (361)
T ss_dssp EEEEEEC-SSCCCEEEECTTSCEEEEEETT---TTEEEEEEECTTTCCE
T ss_pred EeeEecC-CCCCceEEECCCCCEEEEEECC---CCCEEEEEEECCCCcE
Confidence 2333443 5568899999999988877642 5778885 5556653
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.41 E-value=3.9e-12 Score=128.14 Aligned_cols=165 Identities=10% Similarity=0.116 Sum_probs=115.2
Q ss_pred CceeeEEEeCCCCcEEEEEe---------------------------------CCCcEEEEECCCCccccccccccccCC
Q 018235 166 GCVNRIRAMTQNPHICASWA---------------------------------DTGHVQVWDLRSHLNALAESETIVGQG 212 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s---------------------------------~dg~V~iwd~~~~~~~~~~~~~~~~~~ 212 (359)
+.+.++.|+|++ ..||+++ .++.|++||+...
T Consensus 181 ~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-------------- 245 (706)
T 2z3z_A 181 GIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-------------- 245 (706)
T ss_dssp TCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT--------------
T ss_pred CCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC--------------
Confidence 346899999999 6666665 4467899998762
Q ss_pred CCCCCCCCCcEEe--cCCCCceEEEEeCCCCCCeEEEEcCCC-----cEEEEecCCCCcceecCcccc-CCC---CCeEE
Q 018235 213 APQVSNQSPLVKF--GGHKDEGYAIDWNPITTGRLVTGDCNS-----CIYLWEPASDATWNVDPNPFI-GHS---ASVED 281 (359)
Q Consensus 213 ~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sgs~dg-----~I~lwd~~~~~~~~~~~~~~~-~h~---~~V~~ 281 (359)
...... ..|...+.+++|+|++. +|++++.++ .|++||+.++.... ..+. .+. ..+.+
T Consensus 246 -------~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~~~~---~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 246 -------KTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETGRFVR---TLFVETDKHYVEPLHP 314 (706)
T ss_dssp -------EEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTCCEEE---EEEEEECSSCCCCCSC
T ss_pred -------ceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCCceee---EEEEccCCCeECccCC
Confidence 211111 24666789999999998 888877665 89999998732322 1111 122 23467
Q ss_pred EEecC--CCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEE-EEEcCCCCeEEEEeeecc-cceEEEEEeCcCCc
Q 018235 282 LQWSP--TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV-ISWNRCWLAVCWHLEVMM-EHFLFMILDCSRGE 357 (359)
Q Consensus 282 v~~sp--~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~-i~~s~~~~~l~~~~~~~~-~d~~i~iwd~~~g~ 357 (359)
++|+| ++. ++++++.|+.++||.+......+..+..|...+.. ++|+|++..|++...... ....|..|+..++.
T Consensus 315 ~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 315 LTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 89999 998 88999999999999886322566677778888876 899999998877654211 01367777776654
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.40 E-value=2.9e-12 Score=126.26 Aligned_cols=150 Identities=10% Similarity=-0.028 Sum_probs=111.0
Q ss_pred ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEE
Q 018235 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 246 (359)
.+....|+|++..++++.+.++.+.|||+.. .++......+. .+++|||+|+ +|+
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~---------------------g~~~~l~~~~~---~~~~~spDG~-~la 165 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDG---------------------GGLRELARLPG---FGFVSDIRGD-LIA 165 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEET---------------------TEEEEEEEESS---CEEEEEEETT-EEE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccC---------------------CcEEEeecCCC---ceEEECCCCC-EEE
Confidence 3446688888855544445555566999876 23322232222 7899999998 888
Q ss_pred EEcCC----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCC--cEEEEECCCCCCceEEeecCC
Q 018235 247 TGDCN----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--HIAIWDTRVGKSALTSFKAHN 320 (359)
Q Consensus 247 sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--~I~iwD~r~~~~~~~~~~~h~ 320 (359)
+++.+ +.|++||+.+ +.. ..+..|...+..++|||+|+ .|+++..++ .|++||+.++ ... .+..|.
T Consensus 166 ~~~~~~~~~~~i~~~d~~~-g~~----~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~ 237 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSS-GGL----RVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDG-SVE-DLELPS 237 (582)
T ss_dssp EEEEEETTEEEEEEEETTT-CCC----EEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTC-CEE-ECCCSC
T ss_pred EEEEcCCCCeEEEEEcCCC-CCc----eEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCC-cEE-EccCCC
Confidence 77766 7899999876 443 35678888999999999999 788888888 8999999986 444 566777
Q ss_pred CCEEEEE--------EcCCCCeEEEEeeecccceEEEEEeC
Q 018235 321 ADVNVIS--------WNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 321 ~~V~~i~--------~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
..+..+. |+|+|.+++.... ++.+++|+.
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~----~g~~~l~~~ 274 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARR----EGRSAVFID 274 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEE----TTEEEEEET
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEc----CCcEEEEEE
Confidence 7777777 9999965555544 788999987
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.39 E-value=3.1e-11 Score=110.01 Aligned_cols=121 Identities=10% Similarity=0.034 Sum_probs=84.8
Q ss_pred ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC------CceEEEEeCCC
Q 018235 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK------DEGYAIDWNPI 240 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------~~v~~l~~sp~ 240 (359)
.+..++|+|++..++++...++.|.+||+.. .+.+..+..+. ..+.+++|+|+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---------------------~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---------------------CKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT---------------------TEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC---------------------CcEEEEEEcccccccccccccceEECCC
Confidence 6889999999965677777899999999976 23333333221 23678999999
Q ss_pred CCCeEEEEcCC------------CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCC
Q 018235 241 TTGRLVTGDCN------------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (359)
Q Consensus 241 ~~~~l~sgs~d------------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (359)
+. +|++++.+ +.|.+||+.+ +........+ .+...+.+++|+|++. +++ ++ +.|.+||+.+
T Consensus 103 g~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~ 175 (349)
T 1jmx_B 103 GK-EVYATVNPTQRLNDHYVVKPPRLEVFSTAD-GLEAKPVRTF-PMPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKT 175 (349)
T ss_dssp SS-EEEEEEEEEEECSSCEEECCCEEEEEEGGG-GGGBCCSEEE-ECCSSCCCEEECTTSC-EEE-ES--SSEEEECTTT
T ss_pred CC-EEEEEcccccccccccccCCCeEEEEECCC-ccccceeeec-cCCCcccceeECCCCc-EEE-cc--CcEEEEeCCC
Confidence 98 88877755 8999999976 2222111222 2444688999999998 766 33 3499999988
Q ss_pred CCCceEEe
Q 018235 309 GKSALTSF 316 (359)
Q Consensus 309 ~~~~~~~~ 316 (359)
+ +.+..+
T Consensus 176 ~-~~~~~~ 182 (349)
T 1jmx_B 176 G-KYTVAL 182 (349)
T ss_dssp C-CEEEEE
T ss_pred C-ceeccc
Confidence 6 444444
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.38 E-value=2.1e-11 Score=120.17 Aligned_cols=204 Identities=8% Similarity=-0.014 Sum_probs=133.9
Q ss_pred cccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018235 64 HIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDED 143 (359)
Q Consensus 64 ~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~~d 143 (359)
.+..|+.++.+.||+ .+|+.+... ++.+.||.+.
T Consensus 19 ~~~~~~~~~~~~~DG-----------~~la~~s~~----~g~~~lw~~~------------------------------- 52 (582)
T 3o4h_A 19 LIAVEKYSLQGVVDG-----------DKLLVVGFS----EGSVNAYLYD------------------------------- 52 (582)
T ss_dssp HHHSCEEEEEEEETT-----------TEEEEEEEE----TTEEEEEEEE-------------------------------
T ss_pred HhccchheeecCCCC-----------CeEEEEEcc----CCceeEEEEc-------------------------------
Confidence 346789999999996 255554422 4468888762
Q ss_pred CCcccCCCCCCCeEEEEEecCC-CceeeEEEeCCCCcEEEEEeC---CCcEEEEECCCCccccccccccccCCCCCCCCC
Q 018235 144 SDDDEEGGSGTPILQLRKVAHQ-GCVNRIRAMTQNPHICASWAD---TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219 (359)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~H~-~~V~~i~~~p~~~~~lat~s~---dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (359)
.... .++..|. ..|..+.|+|+ .++++++. +....||.+.... ..
T Consensus 53 ----------~g~~-~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~------------------~g 101 (582)
T 3o4h_A 53 ----------GGET-VKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSR------------------PG 101 (582)
T ss_dssp ----------TTEE-EECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTS------------------TT
T ss_pred ----------CCCc-EeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccC------------------CC
Confidence 1122 3344555 68999999997 57777664 4555666554300 01
Q ss_pred CCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-
Q 018235 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD- 298 (359)
Q Consensus 220 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D- 298 (359)
... .+..+. .....+|+|++.+.+++.+.++.+.+||+.+ +... .+..+.. .+++|||+|+ .|++++.+
T Consensus 102 ~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~-g~~~----~l~~~~~--~~~~~spDG~-~la~~~~~~ 171 (582)
T 3o4h_A 102 EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDG-GGLR----ELARLPG--FGFVSDIRGD-LIAGLGFFG 171 (582)
T ss_dssp CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEET-TEEE----EEEEESS--CEEEEEEETT-EEEEEEEEE
T ss_pred ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccC-CcEE----EeecCCC--ceEEECCCCC-EEEEEEEcC
Confidence 111 222222 2346688888876555544455566999976 4432 2333333 7899999999 88877776
Q ss_pred ---CcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 299 ---GHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 299 ---g~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+.|++||+.++ . ...+..|...++.++|+|+|+.|+.... .....|.+|+..++..
T Consensus 172 ~~~~~i~~~d~~~g-~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~--~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 172 GGRVSLFTSNLSSG-G-LRVFDSGEGSFSSASISPGMKVTAGLET--AREARLVTVDPRDGSV 230 (582)
T ss_dssp TTEEEEEEEETTTC-C-CEEECCSSCEEEEEEECTTSCEEEEEEC--SSCEEEEEECTTTCCE
T ss_pred CCCeEEEEEcCCCC-C-ceEeecCCCccccceECCCCCEEEEccC--CCeeEEEEEcCCCCcE
Confidence 78999999886 3 4567788888999999999999984433 1123799999887764
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.36 E-value=2e-12 Score=130.60 Aligned_cols=174 Identities=11% Similarity=0.029 Sum_probs=110.8
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCce---------EEEE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEG---------YAID 236 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------~~l~ 236 (359)
+.+..++|+|+| ..||.+. ++.|++|++.......-.. .......+.||...+ .+++
T Consensus 110 ~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l~~------------~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 110 RPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQITF------------NGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp SSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCC------------CCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred cccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEEec------------CCCcCCeEcccccceeeeecccCcccEE
Confidence 568899999999 5666654 7899999997621100000 011112334443332 4899
Q ss_pred eCCCCCCeEEEEcCCC----------------------------------cEEEEecCCCCcc----ee-cCccccCCCC
Q 018235 237 WNPITTGRLVTGDCNS----------------------------------CIYLWEPASDATW----NV-DPNPFIGHSA 277 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg----------------------------------~I~lwd~~~~~~~----~~-~~~~~~~h~~ 277 (359)
|||++. +|++++.|. .|++||+.. +.. .+ ....+.+|..
T Consensus 176 wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 176 WSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp ECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHHTSCE
T ss_pred ECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC-CCccceeEccCCccCCCCcc
Confidence 999998 888877552 788999876 332 10 0123457888
Q ss_pred CeEEEEecCCCCCEEEEEeCC----CcEEEEE----CCCCCCceEEe----ecCCCCEE-----EEEEcCCCCeEEEEee
Q 018235 278 SVEDLQWSPTEPDVFASCSVD----GHIAIWD----TRVGKSALTSF----KAHNADVN-----VISWNRCWLAVCWHLE 340 (359)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~D----g~I~iwD----~r~~~~~~~~~----~~h~~~V~-----~i~~s~~~~~l~~~~~ 340 (359)
.+..++|||++. ++++.... ..|.+|| +.++ .+...+ ..|...+. .+.|+|+|+.+++...
T Consensus 254 ~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 331 (719)
T 1z68_A 254 YFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTW-DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS 331 (719)
T ss_dssp EEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSE-ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE
T ss_pred eEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCC-ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE
Confidence 999999999976 77664433 2488899 7665 322222 35666676 8899999997765332
Q ss_pred ecccceEEEEEeCcCCc
Q 018235 341 VMMEHFLFMILDCSRGE 357 (359)
Q Consensus 341 ~~~~d~~i~iwd~~~g~ 357 (359)
.......|.+|+...+.
T Consensus 332 ~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 332 DKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp CTTSCEEEEEESSCSTT
T ss_pred ccCCceEEEEEECCCCc
Confidence 22234567788876554
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.29 E-value=3.3e-10 Score=104.94 Aligned_cols=162 Identities=7% Similarity=0.001 Sum_probs=107.0
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECC-CCccccccccccccCCCCCCCCCCCcEE--ecCCCCceEEEEeCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLR-SHLNALAESETIVGQGAPQVSNQSPLVK--FGGHKDEGYAIDWNPI 240 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~l~~sp~ 240 (359)
+...+..++|+|++ .++++++.+ .|.+|++. . .+.... ...+. ...+++|+|+
T Consensus 38 ~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~---------------------g~~~~~~~~~~~g-~~~~~~~spd 93 (365)
T 1jof_A 38 QDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSP---------------------TEIVHEASHPIGG-HPRANDADTN 93 (365)
T ss_dssp TTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEET---------------------TEEEEEEEEECCS-SGGGGCTTSC
T ss_pred CCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCC---------------------CCEEEeeEeecCC-CCccEEECCC
Confidence 44578899999999 666676766 99999986 3 122111 11112 2446899999
Q ss_pred CCC-eEEEEc-------------CCCcEEEEecCCCCcceecCcccc-CCCCCeEEEEecCCCCCEEEEEe-CCCcEEEE
Q 018235 241 TTG-RLVTGD-------------CNSCIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCS-VDGHIAIW 304 (359)
Q Consensus 241 ~~~-~l~sgs-------------~dg~I~lwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s-~Dg~I~iw 304 (359)
+.. ++++++ .+|++.+|++...+........+. .+...+.+++|+|+++ .++++. .++.|++|
T Consensus 94 g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 94 TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTANKLWTH 172 (365)
T ss_dssp CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEE
T ss_pred CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCCEEEEE
Confidence 873 244553 689999999975344321111111 2456899999999998 555544 57899999
Q ss_pred ECC-CCCCc--eEEee--cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 305 DTR-VGKSA--LTSFK--AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 305 D~r-~~~~~--~~~~~--~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
|+. ++ +. +..+. .|...+..++|+|+|++++.... .++.+.+|+..
T Consensus 173 ~~~~~g-~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~---~~~~v~v~~~~ 223 (365)
T 1jof_A 173 RKLASG-EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME---AGNRICEYVID 223 (365)
T ss_dssp EECTTS-CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET---TTTEEEEEEEC
T ss_pred EECCCC-CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC---CCCeEEEEEEe
Confidence 998 55 32 22333 34677999999999998876643 25678888643
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.29 E-value=3.5e-10 Score=104.79 Aligned_cols=167 Identities=10% Similarity=-0.017 Sum_probs=107.9
Q ss_pred CceeeEEEeCCCCc-EEEEEe-------------CCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec----C
Q 018235 166 GCVNRIRAMTQNPH-ICASWA-------------DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG----G 227 (359)
Q Consensus 166 ~~V~~i~~~p~~~~-~lat~s-------------~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 227 (359)
+.+.+++|+|++.. +++++. .+|.+.+|++... ......+. .
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~--------------------g~~~~~~~~~~~~ 142 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET--------------------GKLEKNVQNYEYQ 142 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT--------------------CCEEEEEEEEECC
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC--------------------CcCcceEeeEEeC
Confidence 44677899999943 355543 6899999999741 22211221 2
Q ss_pred CCCceEEEEeCCCCCCeEEEEc-CCCcEEEEecC-CCCcceecCcccc--CCCCCeEEEEecCCCCCEEEEEe-CCCcEE
Q 018235 228 HKDEGYAIDWNPITTGRLVTGD-CNSCIYLWEPA-SDATWNVDPNPFI--GHSASVEDLQWSPTEPDVFASCS-VDGHIA 302 (359)
Q Consensus 228 h~~~v~~l~~sp~~~~~l~sgs-~dg~I~lwd~~-~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~las~s-~Dg~I~ 302 (359)
+...+++++|+|++. +|++++ .++.|++|++. + ++... ...+. .|...+..++|+|+++ .+++++ .++.|.
T Consensus 143 ~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~-g~~~~-~~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~ 218 (365)
T 1jof_A 143 ENTGIHGMVFDPTET-YLYSADLTANKLWTHRKLAS-GEVEL-VGSVDAPDPGDHPRWVAMHPTGN-YLYALMEAGNRIC 218 (365)
T ss_dssp TTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTT-SCEEE-EEEEECSSTTCCEEEEEECTTSS-EEEEEETTTTEEE
T ss_pred CCCcceEEEECCCCC-EEEEEcCCCCEEEEEEECCC-CCEEE-eeeEecCCCCCCCCEeEECCCCC-EEEEEECCCCeEE
Confidence 456789999999998 676654 46799999997 4 33221 12222 2456799999999999 555554 578999
Q ss_pred EEECCC--CCCce---EEee-------cCCC------CEEEEE-EcCCCCeEEEEeeecc--cceEEEEEeCc-CCc
Q 018235 303 IWDTRV--GKSAL---TSFK-------AHNA------DVNVIS-WNRCWLAVCWHLEVMM--EHFLFMILDCS-RGE 357 (359)
Q Consensus 303 iwD~r~--~~~~~---~~~~-------~h~~------~V~~i~-~s~~~~~l~~~~~~~~--~d~~i~iwd~~-~g~ 357 (359)
+|++.. + ... ..+. +|.. .+..++ |+|+|++|+...+... ..+.|.+|+.. +|.
T Consensus 219 v~~~~~~~g-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 219 EYVIDPATH-MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp EEEECTTTC-CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred EEEEeCCCC-cEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 998753 3 221 1222 1222 488999 9999998876654210 01279999875 443
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.26 E-value=3.1e-10 Score=105.36 Aligned_cols=165 Identities=10% Similarity=-0.030 Sum_probs=112.9
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE--eCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID--WNPI 240 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~--~sp~ 240 (359)
.|...+..+.|+|++ ..|+.++.++.|++||+.. .+....+..+...+.... ++|+
T Consensus 78 ~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~d 135 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLAT---------------------LEENVVYQVPAEWVGYGTWVANSD 135 (388)
T ss_dssp SSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTT---------------------CCEEEEEECCTTEEEEEEEEECTT
T ss_pred CCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCC---------------------CcceeeeechhhcccccceeECCC
Confidence 444555578899999 6777778889999999987 344444555555444444 4888
Q ss_pred CCCeEEE----------------------EcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC-CCCCEEEEEeC
Q 018235 241 TTGRLVT----------------------GDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSV 297 (359)
Q Consensus 241 ~~~~l~s----------------------gs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~ 297 (359)
+. +++. .+.+..|++||+.+ +.. ..+..+...+..++|+| ++. .|+.++.
T Consensus 136 g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-g~~----~~l~~~~~~~~~~~~sp~dg~-~l~~~~~ 208 (388)
T 3pe7_A 136 CT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT-GES----TVILQENQWLGHPIYRPYDDS-TVAFCHE 208 (388)
T ss_dssp SS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT-CCE----EEEEEESSCEEEEEEETTEEE-EEEEEEC
T ss_pred CC-eeccccccCcccccccccchhhhhhccCCcceEEEEECCC-Cce----EEeecCCccccccEECCCCCC-EEEEEEe
Confidence 87 6653 22456899999977 332 34455677899999999 888 7766665
Q ss_pred C------CcEEEEECCCCCCceEEeecCC--CCEEEEEEcCCCCeEEEEeeecc-cceEEEEEeCcCCcc
Q 018235 298 D------GHIAIWDTRVGKSALTSFKAHN--ADVNVISWNRCWLAVCWHLEVMM-EHFLFMILDCSRGEI 358 (359)
Q Consensus 298 D------g~I~iwD~r~~~~~~~~~~~h~--~~V~~i~~s~~~~~l~~~~~~~~-~d~~i~iwd~~~g~v 358 (359)
. ..|.++|+... ....+..+. ..+..+.|+|+|+.|++.....+ ....|.+|+..+|+.
T Consensus 209 ~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 209 GPHDLVDARMWLINEDGT--NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp SCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred cCCCCCcceEEEEeCCCC--ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 3 37888887764 344454444 24778999999998876543222 234599999988763
No 165
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=9.1e-11 Score=109.33 Aligned_cols=136 Identities=9% Similarity=-0.021 Sum_probs=103.8
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
+.+.+ |+.+.| ++ .+++++ .+|.|++||+... ........|...+.++.+.+.
T Consensus 85 ~~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl---------------------~~~~~~~~~~~~v~~i~~~~p- 137 (388)
T 1xip_A 85 KEIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEEL---------------------SEFRTVTSFEKPVFQLKNVNN- 137 (388)
T ss_dssp EECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSST---------------------TCEEEEEECSSCEEEEEECSS-
T ss_pred eeCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhh---------------------hccCccceeecceeeEEecCC-
Confidence 35777 999999 66 677777 7899999999873 223344556667888777653
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCc--eEEe---
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSF--- 316 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~--~~~~--- 316 (359)
.+++++.||.|.+||+... ... .+...|.+++|||.| ++.|..||+|++|+.... .. ..++
T Consensus 138 --~~av~~~dG~L~v~dl~~~-~~~-------~~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~-~~~~k~~I~~P 203 (388)
T 1xip_A 138 --TLVILNSVNDLSALDLRTK-STK-------QLAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNG-EMEKQFEFSLP 203 (388)
T ss_dssp --EEEEEETTSEEEEEETTTC-CEE-------EEEESEEEEEECSSE---EEEEETTSCEEEEEEETT-EEEEEEEECCC
T ss_pred --CEEEEECCCCEEEEEccCC-ccc-------cccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCc-cccccceecCC
Confidence 3888899999999999863 322 145689999999999 577999999999988775 32 3445
Q ss_pred ---e---cCCCCEEEEEEcCCCCeEEEE
Q 018235 317 ---K---AHNADVNVISWNRCWLAVCWH 338 (359)
Q Consensus 317 ---~---~h~~~V~~i~~s~~~~~l~~~ 338 (359)
. +|...|.+|+|.+++.+++.=
T Consensus 204 p~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 204 SELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp HHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cccccccCCCeeEEEEEEecCCeEEEEE
Confidence 2 377889999999998887753
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.26 E-value=1.3e-10 Score=117.88 Aligned_cols=142 Identities=8% Similarity=0.020 Sum_probs=104.0
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCc-----eEEEEeCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDE-----GYAIDWNPI 240 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~sp~ 240 (359)
.....++|+|++ .+++++ +|+|++||+.. ......+.+|... ...++|||+
T Consensus 17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~Spd 72 (740)
T 4a5s_A 17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEY---------------------GNSSVFLENSTFDEFGHSINDYSISPD 72 (740)
T ss_dssp CCCCCEEECSSS-EEEEEE--TTEEEEEETTT---------------------CCEEEEECTTTTTTCCSCCCEEEECTT
T ss_pred ccccccEECCCC-cEEEEc--CCcEEEEECCC---------------------CceEEEEechhhhhhcccccceEECCC
Confidence 346689999999 788885 89999999987 4445556666532 235889999
Q ss_pred CCCeEEEEcCC---------CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 241 TTGRLVTGDCN---------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 241 ~~~~l~sgs~d---------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
+. +|+.++.+ +.+.+||+.+ ++. ..+..|...+..++|||+|. .||.++ ++.|++||+.++..
T Consensus 73 g~-~l~~~~~~~~~~r~~~~~~~~~~d~~~-~~~----~~l~~~~~~~~~~~~SPdG~-~la~~~-~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 73 GQ-FILLEYNYVKQWRHSYTASYDIYDLNK-RQL----ITEERIPNNTQWVTWSPVGH-KLAYVW-NNDIYVKIEPNLPS 144 (740)
T ss_dssp SS-EEEEEEEEEECSSSCEEEEEEEEETTT-TEE----CCSSCCCTTEEEEEECSSTT-CEEEEE-TTEEEEESSTTSCC
T ss_pred CC-EEEEEECCeeeEEEccceEEEEEECCC-CcE----EEcccCCCcceeeEECCCCC-EEEEEE-CCeEEEEECCCCce
Confidence 98 88888765 5677999987 443 34667888999999999999 677774 68999999987622
Q ss_pred ceEEeecCCCCE-----------------EEEEEcCCCCeEEEEe
Q 018235 312 ALTSFKAHNADV-----------------NVISWNRCWLAVCWHL 339 (359)
Q Consensus 312 ~~~~~~~h~~~V-----------------~~i~~s~~~~~l~~~~ 339 (359)
...+..++...+ ..+.|||+|+.|++..
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 111223333222 3489999999888764
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.18 E-value=3.9e-09 Score=96.35 Aligned_cols=160 Identities=14% Similarity=0.079 Sum_probs=114.7
Q ss_pred CCceeeEEEeCCCCcEEEEEeCC------------------------CcEEEEECCCCccccccccccccCCCCCCCCCC
Q 018235 165 QGCVNRIRAMTQNPHICASWADT------------------------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~d------------------------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (359)
-+.+.+|+++|++ +++++...+ +.|.+||... .+
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---------------------g~ 80 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---------------------AE 80 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---------------------CC
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---------------------Ce
Confidence 4789999999999 788887777 4688888764 33
Q ss_pred CcEEec-CCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccc---------cCCCCCeEEEEecC-CCC
Q 018235 221 PLVKFG-GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF---------IGHSASVEDLQWSP-TEP 289 (359)
Q Consensus 221 ~~~~~~-~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~---------~~h~~~V~~v~~sp-~~~ 289 (359)
.+..+. ++.....+|+++|++. ++++...++.|++|+.......+ ..+ .++-.....|+++| ++.
T Consensus 81 ~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~---~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 81 ILQSSGKNLFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPL---LILGRSMQPGSDQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp EEEEECTTTCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCS---EEESBTTBCCCSTTCCSSEEEEEECTTTCC
T ss_pred EEeccCCCccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEE---EEecccCCCCCCccccCCCcEEEEeCCCCe
Confidence 333333 3445788999999998 88998889999999985421122 222 24455789999999 666
Q ss_pred CEEEEEe-CCCcEEEEECCCCCCceEEeecCC----------CCEEEEEEcCC-CCeEEEEeeecccceEEEEEeCcCCc
Q 018235 290 DVFASCS-VDGHIAIWDTRVGKSALTSFKAHN----------ADVNVISWNRC-WLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 290 ~~las~s-~Dg~I~iwD~r~~~~~~~~~~~h~----------~~V~~i~~s~~-~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++++.+ .++.|++||.. + ..+..+.... ...+.|+++|+ +.+++.+.. ++.|++|+..+|+
T Consensus 157 -lyv~d~~~~~~I~~~~~~-g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~----~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 157 -VFVSDGYCNSRIVQFSPS-G-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE----NGRIQCFKTDTKE 229 (329)
T ss_dssp -EEEEECSSCCEEEEECTT-S-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT----TTEEEEEETTTCC
T ss_pred -EEEEeCCCCCeEEEEcCC-C-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC----CCEEEEEECCCCc
Confidence 888887 79999999943 3 4555553222 23899999998 555555544 7789999987554
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.16 E-value=1.9e-09 Score=107.64 Aligned_cols=160 Identities=6% Similarity=-0.057 Sum_probs=104.2
Q ss_pred eEEEe--CCCCc-EEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCC-CCcEEecC-----CCCceEEEEeCCC
Q 018235 170 RIRAM--TQNPH-ICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ-SPLVKFGG-----HKDEGYAIDWNPI 240 (359)
Q Consensus 170 ~i~~~--p~~~~-~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----h~~~v~~l~~sp~ 240 (359)
..+|+ |++.. ++++...+..|.++++.. .. .....+.. |...+.+++|||+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~--------------------~g~~~~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDA--------------------PGGAVPRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTS--------------------TTCCCCEECSCCCCSTTCEEEEEEEEETT
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCC--------------------CCCCCCEeccCCccCCCCccccCcEECCC
Confidence 55666 99965 454444466677776651 00 12233444 5667889999999
Q ss_pred CCCeEEEEcCC----------CcEEEEecCCC-----CcceecCcccc-CCCCCeEEEEecCCCCCEEEEEeCC------
Q 018235 241 TTGRLVTGDCN----------SCIYLWEPASD-----ATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSVD------ 298 (359)
Q Consensus 241 ~~~~l~sgs~d----------g~I~lwd~~~~-----~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~D------ 298 (359)
++ .|++++.+ ..|++|++... +.. ..+. .+...+..++|||+|+ .|+.++.+
T Consensus 141 g~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~ 214 (662)
T 3azo_A 141 RG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV----RELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPW 214 (662)
T ss_dssp TT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS----EESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTT
T ss_pred CC-EEEEEEecccCCCCCCceeEEEEEECCCCccccCCce----eEEEecCCCcccCceECCCCC-EEEEEECCCCCCCC
Confidence 98 88888766 58999998652 222 3444 5567788899999999 77766644
Q ss_pred --CcEEEEECC-CCC-CceEEe-ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 299 --GHIAIWDTR-VGK-SALTSF-KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 299 --g~I~iwD~r-~~~-~~~~~~-~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..|++||+. ++. .....+ ..|...+..+.|+|+|++++.+.. .....|.+|+..++.
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~--~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR--TGWWNLHRVDPATGA 276 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT--TSSCEEEEECTTTCC
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC--CCCeEEEEEECCCCc
Confidence 379999998 331 133334 455788999999999995544432 111256677765553
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.14 E-value=7.7e-10 Score=110.43 Aligned_cols=164 Identities=11% Similarity=0.043 Sum_probs=106.6
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCC--------CcEEEEECCCCccccccccccccCCCCCCCCC---CCcEEecCCCCc
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADT--------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQ---SPLVKFGGHKDE 231 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~d--------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~h~~~ 231 (359)
.+...+..++|+|+| ..||..+.+ ..|++||+... + .+.....+|...
T Consensus 185 ~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~--------------------g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 185 DAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTED--------------------GRFADTRTLLGGPEEA 243 (662)
T ss_dssp SCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTT--------------------SCEEEEEEEEEETTBC
T ss_pred cCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCC--------------------CcccccEEeCCCCCce
Confidence 566788899999999 555544433 47999998730 2 233344456678
Q ss_pred eEEEEeCCCCCCeEEEEcCCC--cEEEEecCCCCcceecCccccCCCCC--------eEEEEecCCCCCEEEEEeCCCcE
Q 018235 232 GYAIDWNPITTGRLVTGDCNS--CIYLWEPASDATWNVDPNPFIGHSAS--------VEDLQWSPTEPDVFASCSVDGHI 301 (359)
Q Consensus 232 v~~l~~sp~~~~~l~sgs~dg--~I~lwd~~~~~~~~~~~~~~~~h~~~--------V~~v~~sp~~~~~las~s~Dg~I 301 (359)
+..+.|+|++. ++++++.++ .|++|++.. +.+. .....+... +..++|+|++. ++++++. +.+
T Consensus 244 ~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~-~~~~---~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~ 316 (662)
T 3azo_A 244 IAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT-GAAT---QLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAA 316 (662)
T ss_dssp EEEEEECTTSC-EEEEECTTSSCEEEEECTTT-CCEE---ESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSC
T ss_pred EcceEECCCCe-EEEEECCCCCeEEEEEECCC-Ccee---ecccccccccCccccccCceEeEeCCCE-EEEEEEc-Ccc
Confidence 99999999999 899998888 556666544 3332 111122111 56788999988 8999988 999
Q ss_pred EEE--ECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 302 AIW--DTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 302 ~iw--D~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+|| |+..+ .+..+..|...+..+ |++++..+++..........|.+++..+++
T Consensus 317 ~l~~~d~~~~--~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 317 VLGILDPESG--ELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEEEETTTT--EEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEECCCC--cEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 999 55543 466777777777766 144555555444332233455566665554
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.14 E-value=7.2e-09 Score=92.11 Aligned_cols=156 Identities=10% Similarity=0.101 Sum_probs=115.5
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec--CCCCceEEEEeCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGYAIDWNPIT 241 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~ 241 (359)
+...++.+++.|++ .++++...++.|.+|+... ..+..+. ++.....+|++++++
T Consensus 119 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g----------------------~~~~~~~~~~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 119 ILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNG----------------------NVLHKFGCSKHLEFPNGVVVNDKQ 175 (286)
T ss_dssp TCSCEEEEEECTTS-CEEEEETTTTEEEEECTTS----------------------CEEEEEECTTTCSSEEEEEECSSS
T ss_pred cCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCC----------------------CEEEEeCCCCccCCcEEEEECCCC
Confidence 44678999999998 6888888889999999654 2233332 344568899999998
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCcccc--CCCCCeEEEEecCCCCCEEEEEeCCC-cEEEEECCCCCCceEEeec
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFI--GHSASVEDLQWSPTEPDVFASCSVDG-HIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~las~s~Dg-~I~iwD~r~~~~~~~~~~~ 318 (359)
. ++++...++.|++|+... ... ..+. ++...+..|+++|++. ++++...++ .|++||... ..+..+..
T Consensus 176 ~-l~v~~~~~~~i~~~~~~g--~~~---~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g--~~~~~~~~ 246 (286)
T 1q7f_A 176 E-IFISDNRAHCVKVFNYEG--QYL---RQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG--QLISALES 246 (286)
T ss_dssp E-EEEEEGGGTEEEEEETTC--CEE---EEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS--CEEEEEEE
T ss_pred C-EEEEECCCCEEEEEcCCC--CEE---EEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCC--CEEEEEcc
Confidence 7 888888899999999743 332 2232 2346789999999997 888888876 999999643 45556654
Q ss_pred CC--CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 319 HN--ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 319 h~--~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
+. ..+..++|+|+|.+++.+ . ++.|++|+....
T Consensus 247 ~~~~~~~~~i~~~~~g~l~vs~-~----~~~v~v~~~~~~ 281 (286)
T 1q7f_A 247 KVKHAQCFDVALMDDGSVVLAS-K----DYRLYIYRYVQL 281 (286)
T ss_dssp SSCCSCEEEEEEETTTEEEEEE-T----TTEEEEEECSCC
T ss_pred cCCCCcceeEEECCCCcEEEEC-C----CCeEEEEEcccc
Confidence 43 347899999999866653 3 788999987653
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.12 E-value=1.4e-09 Score=100.91 Aligned_cols=169 Identities=12% Similarity=-0.013 Sum_probs=113.5
Q ss_pred EEEecCCCceee-----EEEeCCCCcEEEEEeC-CCc--EEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC
Q 018235 159 LRKVAHQGCVNR-----IRAMTQNPHICASWAD-TGH--VQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD 230 (359)
Q Consensus 159 ~~~~~H~~~V~~-----i~~~p~~~~~lat~s~-dg~--V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 230 (359)
.++..|.+.+.. .+|+|++. .|+..+. +|. |.+||+.. ........++..
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~g~~~l~~~d~~~---------------------g~~~~lt~~~~~ 81 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGS-KLLFGGAFDGPWNYYLLDLNT---------------------QVATQLTEGRGD 81 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSC-EEEEEECTTSSCEEEEEETTT---------------------CEEEECCCSSCB
T ss_pred EEecCCcccccchhhcCccCCCCCC-EEEEEEcCCCCceEEEEeCCC---------------------CceEEeeeCCCC
Confidence 455567766666 88999994 4555454 774 77778765 333344445555
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEe--cCCCCCEEEEE-------------
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW--SPTEPDVFASC------------- 295 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~--sp~~~~~las~------------- 295 (359)
.+.++.|+|++. .|+.++.++.|++||+.++ ... ..+..+...+....| +|++. +++..
T Consensus 82 ~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~g-~~~---~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 82 NTFGGFLSPDDD-ALFYVKDGRNLMRVDLATL-EEN---VVYQVPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp CSSSCEECTTSS-EEEEEETTTEEEEEETTTC-CEE---EEEECCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSH
T ss_pred CccceEEcCCCC-EEEEEeCCCeEEEEECCCC-cce---eeeechhhcccccceeECCCCC-eeccccccCccccccccc
Confidence 555788999998 8999998999999999874 322 223444555544444 89988 66532
Q ss_pred ---------eCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcC-CCCeEEEEeeeccc--ceEEEEEeCcCCc
Q 018235 296 ---------SVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNR-CWLAVCWHLEVMME--HFLFMILDCSRGE 357 (359)
Q Consensus 296 ---------s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~~~~~~~~~--d~~i~iwd~~~g~ 357 (359)
..+..|.+||+.++ . ...+..+...+..++|+| +|..|++....... ...|.+++...+.
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g-~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTG-E-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTC-C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred chhhhhhccCCcceEEEEECCCC-c-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 23467999999986 3 445556677899999999 99988877642111 2356777765543
No 172
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.11 E-value=5.3e-10 Score=104.17 Aligned_cols=155 Identities=10% Similarity=0.076 Sum_probs=109.2
Q ss_pred ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEE
Q 018235 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 246 (359)
.++.+++++.. .++++|+.++ +.+|++............ ...+.... .+.. |+.|+| ++. .|+
T Consensus 39 ~~nlLais~~~-gll~a~~~~~-l~v~~~~~l~~~~~~~~~----------~~~~~~~~-~lp~-V~~l~f--d~~-~L~ 101 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHITSDST----------PLTFKWEK-EIPD-VIFVCF--HGD-QVL 101 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHHSSSC----------CCCCSEEE-ECTT-EEEEEE--ETT-EEE
T ss_pred cccEEEEcCCC-CEEEEeCCCE-EEEEEhhHhhhhhccccc----------cccceEEe-eCCC-eeEEEE--CCC-EEE
Confidence 69999999988 7888888775 556997653211110000 02233333 3555 999999 666 888
Q ss_pred EEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEE
Q 018235 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326 (359)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i 326 (359)
++ .++.|++||+++..+. .....|...|.++.+.+. -+|+++.||.|.+||+..+ ... . +...|.|+
T Consensus 102 v~-~~~~l~v~dv~sl~~~----~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~-~~~-~---~~~~Vs~v 168 (388)
T 1xip_A 102 VS-TRNALYSLDLEELSEF----RTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTK-STK-Q---LAQNVTSF 168 (388)
T ss_dssp EE-ESSEEEEEESSSTTCE----EEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTC-CEE-E---EEESEEEE
T ss_pred EE-cCCcEEEEEchhhhcc----CccceeecceeeEEecCC---CEEEEECCCCEEEEEccCC-ccc-c---ccCCceEE
Confidence 88 7899999999874322 335567778888877654 3888999999999999976 332 2 44579999
Q ss_pred EEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 327 SWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 327 ~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+|+|.| ++.+.. ++.+++|+...++
T Consensus 169 ~WSpkG--~~vg~~----dg~i~~~~~~~~~ 193 (388)
T 1xip_A 169 DVTNSQ--LAVLLK----DRSFQSFAWRNGE 193 (388)
T ss_dssp EECSSE--EEEEET----TSCEEEEEEETTE
T ss_pred EEcCCc--eEEEEc----CCcEEEEcCCCcc
Confidence 999999 455554 7889999877655
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.08 E-value=2.1e-08 Score=101.16 Aligned_cols=178 Identities=10% Similarity=0.021 Sum_probs=118.4
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeC----CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWAD----TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~----dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
....|...+..+.|+|++..++++... +..|++||+........ .......+..+...+..
T Consensus 227 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~--------------~~~~~~~l~~~~~~~~~- 291 (710)
T 2xdw_A 227 EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT--------------GILKWVKLIDNFEGEYD- 291 (710)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC--------------SSCCCEEEECSSSSCEE-
T ss_pred ccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC--------------CccceEEeeCCCCcEEE-
Confidence 333456678899999999545444431 56899999864100000 01134555566655544
Q ss_pred EeCCCCCCeEEEEcCC----CcEEEEecCCCCcceecCccccCCCC--CeEEEEecCCCCCEEEEEeCCCc--EEEEECC
Q 018235 236 DWNPITTGRLVTGDCN----SCIYLWEPASDATWNVDPNPFIGHSA--SVEDLQWSPTEPDVFASCSVDGH--IAIWDTR 307 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~--~V~~v~~sp~~~~~las~s~Dg~--I~iwD~r 307 (359)
.|+|++. .|+..+.. +.|.+|++..+.... .+.+..|.. .+.+++|++.+. ++++...++. |.+||+.
T Consensus 292 ~~s~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~ 367 (710)
T 2xdw_A 292 YVTNEGT-VFTFKTNRHSPNYRLINIDFTDPEESK--WKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLA 367 (710)
T ss_dssp EEEEETT-EEEEEECTTCTTCEEEEEETTSCCGGG--CEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETT
T ss_pred EEeccCC-EEEEEECCCCCCCEEEEEeCCCCCccc--ceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECC
Confidence 4888887 55544432 369999987643100 134445544 688899997666 8888988885 5566775
Q ss_pred CCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 308 VGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 308 ~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
++ ..+..+..+...|..++++|++..+++...+...+..+.+|+..+++
T Consensus 368 ~g-~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 368 TG-ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TC-CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CC-CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 65 55667776777889999999998888777766678899999988775
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.07 E-value=3.4e-08 Score=89.64 Aligned_cols=165 Identities=9% Similarity=-0.045 Sum_probs=112.4
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
..+..+...+.+++|+|++ .+++++..++.|.+||... ......+..+...+.+++|+
T Consensus 38 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~~~~~~~i~~~ 95 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPET---------------------KEIKRPFVSHKANPAAIKIH 95 (333)
T ss_dssp EEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTT---------------------CCEEEEEECSSSSEEEEEEC
T ss_pred EEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCC---------------------CcEEEEeeCCCCCcceEEEC
Confidence 3445677778999999998 6888888899999999875 23222233455689999999
Q ss_pred CCCCCeEEEEcCC----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeC------CCcEEEEECCC
Q 018235 239 PITTGRLVTGDCN----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV------DGHIAIWDTRV 308 (359)
Q Consensus 239 p~~~~~l~sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~------Dg~I~iwD~r~ 308 (359)
+++. ++++...+ +.|.+||... +..... .....+...++++.++|++. ++++... .+.|..+|..+
T Consensus 96 ~dg~-l~v~~~~~~~~~~~i~~~d~~~-~~~~~~-~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 96 KDGR-LFVCYLGDFKSTGGIFAATENG-DNLQDI-IEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp TTSC-EEEEECTTSSSCCEEEEECTTS-CSCEEE-ECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCc-EEEEeCCCCCCCceEEEEeCCC-CEEEEE-EccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCC
Confidence 9987 77777666 6899999876 332100 00012446799999999997 7776654 35566666554
Q ss_pred CCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 309 GKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 309 ~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+ .+..+..+...++.++|+|++..+.+.... ++.|.+|+..
T Consensus 172 ~--~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~ 212 (333)
T 2dg1_A 172 R--TVTPIIQNISVANGIALSTDEKVLWVTETT---ANRLHRIALE 212 (333)
T ss_dssp C--CEEEEEEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEEC
T ss_pred C--EEEEeecCCCcccceEECCCCCEEEEEeCC---CCeEEEEEec
Confidence 3 233333334458899999999866655332 5668888874
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.06 E-value=1.8e-08 Score=101.75 Aligned_cols=237 Identities=9% Similarity=-0.025 Sum_probs=140.1
Q ss_pred eeeeCCcccCCCCceeeeChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeecc
Q 018235 35 KVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNI 114 (359)
Q Consensus 35 ~~~~~~~~~~~~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l 114 (359)
.+|+-... ...+++..|+....- .-.|...++.|.||+ .+|+.+....+.+...|.|+++.
T Consensus 99 ~l~~~~~~--~~~~~~lld~~~l~~----~~~~~~~~~~~SPDg-----------~~la~~~~~~G~~~~~i~v~d~~-- 159 (710)
T 2xdw_A 99 VLYVQDSL--EGEARVFLDPNILSD----DGTVALRGYAFSEDG-----------EYFAYGLSASGSDWVTIKFMKVD-- 159 (710)
T ss_dssp EEEEESST--TSCCEEEECGGGGCT----TSCEEEEEEEECTTS-----------SEEEEEEEETTCSCEEEEEEETT--
T ss_pred EEEEEcCC--CCCcEEEECHHHhcc----CCCEEEEEEEECCCC-----------CEEEEEEcCCCCceEEEEEEECC--
Confidence 45664321 233456666654321 123445678899996 36666665555555688888872
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCc-----
Q 018235 115 SGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGH----- 189 (359)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~----- 189 (359)
..........+ ..+..+.|+|++ ..|+.++.++.
T Consensus 160 ---------------------------------------tg~~~~~~~~~-~~~~~~~wspDg-~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 160 ---------------------------------------GAKELPDVLER-VKFSCMAWTHDG-KGMFYNAYPQQDGKSD 198 (710)
T ss_dssp ---------------------------------------TTEEEEEEEEE-ECSCCEEECTTS-SEEEEEECCCCSSCCS
T ss_pred ---------------------------------------CCCCCcccccC-cccceEEEEeCC-CEEEEEEECCcccccc
Confidence 11221112222 226789999999 55555555554
Q ss_pred -----------EEEEECCCCccccccccccccCCCCCCCCCCCcEEecC--CCCceEEEEeCCCCCCeEEEEcC-----C
Q 018235 190 -----------VQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG--HKDEGYAIDWNPITTGRLVTGDC-----N 251 (359)
Q Consensus 190 -----------V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sgs~-----d 251 (359)
|++|++.... ......+.. |...+.++.|||++. +|+.++. +
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~-------------------~~~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~ 258 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQ-------------------SEDILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDPV 258 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCG-------------------GGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSSC
T ss_pred ccccccCCCCEEEEEECCCCc-------------------ccceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCCc
Confidence 9999997621 111233333 455678999999998 6666543 5
Q ss_pred CcEEEEecCC------CCcceecCccccCCCCCeEEEEecCCCCCEEEEEeC---CCcEEEEECCCCCC-ceEEeecCCC
Q 018235 252 SCIYLWEPAS------DATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV---DGHIAIWDTRVGKS-ALTSFKAHNA 321 (359)
Q Consensus 252 g~I~lwd~~~------~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~---Dg~I~iwD~r~~~~-~~~~~~~h~~ 321 (359)
..|++||+.. +... ...+..+...+.. .|+|++..+++.... .+.|.+||+.++.. ....+..|..
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 334 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILK---WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE 334 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCC---CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred cEEEEEECcccccccCCccc---eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC
Confidence 6899999865 2211 2445566666655 488988844444433 33699999987621 2345555544
Q ss_pred --CEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 322 --DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 322 --~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.+..++|++.+.+++..... ....|.+|+..+|.
T Consensus 335 ~~~~~~~~~~~~~~lv~~~~~~--g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 335 KDVLEWVACVRSNFLVLCYLHD--VKNTLQLHDLATGA 370 (710)
T ss_dssp SCEEEEEEEETTTEEEEEEEET--TEEEEEEEETTTCC
T ss_pred CCeEEEEEEEcCCEEEEEEEEC--CEEEEEEEECCCCC
Confidence 58889999766665555431 11346667764553
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.05 E-value=1e-08 Score=91.69 Aligned_cols=159 Identities=9% Similarity=-0.016 Sum_probs=112.9
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
.+.....++.|+|++..+++++..++.|+.|+... . ...+..+...+.+|++++++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---------------------~--~~~~~~~~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---------------------Q--LSPEMHPSHHQNGHCLNKQGH 81 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---------------------C--EEEEESSCSSEEEEEECTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC---------------------C--eEEEECCCCCcceeeECCCCc
Confidence 56677889999999954888999999999999876 2 455666677889999999997
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeC-----------------CCcEEEE
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSV-----------------DGHIAIW 304 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~-----------------Dg~I~iw 304 (359)
++++...++.|.+||..+ ++.........+ ....+++++++|++. ++++.+. .+.|..+
T Consensus 82 -l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~ 158 (296)
T 3e5z_A 82 -LIACSHGLRRLERQREPG-GEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRL 158 (296)
T ss_dssp -EEEEETTTTEEEEECSTT-CCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEE
T ss_pred -EEEEecCCCeEEEEcCCC-CcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEE
Confidence 777777778999999866 332210011111 124577899999998 8887431 2345555
Q ss_pred ECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 305 DTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+.. + .+..+..+....+.++|+|++..++.+.. .+.|.+|+..
T Consensus 159 ~~~-g--~~~~~~~~~~~~~gi~~s~dg~~lv~~~~----~~~i~~~~~~ 201 (296)
T 3e5z_A 159 APD-G--TLSAPIRDRVKPNGLAFLPSGNLLVSDTG----DNATHRYCLN 201 (296)
T ss_dssp CTT-S--CEEEEECCCSSEEEEEECTTSCEEEEETT----TTEEEEEEEC
T ss_pred CCC-C--CEEEeecCCCCCccEEECCCCCEEEEeCC----CCeEEEEEEC
Confidence 544 2 34445556677899999999998843332 5678888865
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.02 E-value=2.1e-09 Score=99.70 Aligned_cols=159 Identities=10% Similarity=0.029 Sum_probs=103.1
Q ss_pred eeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEE--------------
Q 018235 169 NRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA-------------- 234 (359)
Q Consensus 169 ~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------- 234 (359)
..+.|+|++ ..|+..+.++.|++|++... .....+..+......
T Consensus 84 ~~~~~spdg-~~l~~~~~~~~l~~~d~~~~---------------------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 141 (396)
T 3c5m_A 84 FGGFISTDE-RAFFYVKNELNLMKVDLETL---------------------EEQVIYTVDEEWKGYGTWVANSDCTKLVG 141 (396)
T ss_dssp TTCEECTTS-SEEEEEETTTEEEEEETTTC---------------------CEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred ccceECCCC-CEEEEEEcCCcEEEEECCCC---------------------CcEEEEecccccCCCCCEEEeccCCcccc
Confidence 347899999 67777788889999998762 222222222221111
Q ss_pred -----EEeCCCCCCeEEEE-----cCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC-CCCCEEEEEeCC-----
Q 018235 235 -----IDWNPITTGRLVTG-----DCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVD----- 298 (359)
Q Consensus 235 -----l~~sp~~~~~l~sg-----s~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~D----- 298 (359)
+.|+|++. .++.+ ..+..|++||+.. +... .+..+...+..+.|+| ++. .|+.++.+
T Consensus 142 ~~~~~~~~spdg~-~~~~~~~~~~~~~~~l~~~d~~~-g~~~----~~~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~ 214 (396)
T 3c5m_A 142 IEILKRDWQPLTS-WEKFAEFYHTNPTCRLIKVDIET-GELE----VIHQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLV 214 (396)
T ss_dssp EEEEGGGCCCCCS-HHHHHHHHHTCCCEEEEEEETTT-CCEE----EEEEESSCEEEEEEETTEEE-EEEEEECSCSSSC
T ss_pred ccccccccCCCCc-ceeeeeeccCCCcceEEEEECCC-CcEE----eeccCCcccccceECCCCCC-EEEEEecCCCCCC
Confidence 46788887 55443 4567899999976 4332 2335667899999999 676 56655543
Q ss_pred -CcEEEEECCCCCCceEEeecCC--CCEEEEEEcCCCCeEEEEeeec-ccceEEEEEeCcCCcc
Q 018235 299 -GHIAIWDTRVGKSALTSFKAHN--ADVNVISWNRCWLAVCWHLEVM-MEHFLFMILDCSRGEI 358 (359)
Q Consensus 299 -g~I~iwD~r~~~~~~~~~~~h~--~~V~~i~~s~~~~~l~~~~~~~-~~d~~i~iwd~~~g~v 358 (359)
..|.+||+... ....+..+. ..+..++|+|+|+.|++..... .....|.+|+..++.+
T Consensus 215 ~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 215 DARMWLVNEDGS--NVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp SCCCEEEETTSC--CCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE
T ss_pred CceEEEEECCCC--ceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe
Confidence 46888898764 233443332 2578899999999877765421 1125699999887753
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.00 E-value=1.7e-08 Score=91.97 Aligned_cols=166 Identities=17% Similarity=0.173 Sum_probs=115.7
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe---------cCCCCceE
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF---------GGHKDEGY 233 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~ 233 (359)
.+-...+.+++.|++ .++++...++.|++|+.... ...+..+ .++.....
T Consensus 88 ~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~--------------------~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSK--------------------EGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp TTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCS--------------------SCCSEEESBTTBCCCSTTCCSSEE
T ss_pred CccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCC--------------------eEEEEEecccCCCCCCccccCCCc
Confidence 344678899999999 68888889999999998652 1133333 24455688
Q ss_pred EEEeCC-CCCCeEEEEc-CCCcEEEEecCCCCcceecCcccc----------CCCCCeEEEEecCCCCCEEEEEeCCCcE
Q 018235 234 AIDWNP-ITTGRLVTGD-CNSCIYLWEPASDATWNVDPNPFI----------GHSASVEDLQWSPTEPDVFASCSVDGHI 301 (359)
Q Consensus 234 ~l~~sp-~~~~~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~----------~h~~~V~~v~~sp~~~~~las~s~Dg~I 301 (359)
+|+++| .+. ++++.+ .++.|++|+. . +... ..+. ++-.....|+++|++..++++...++.|
T Consensus 147 ~ia~~~~~g~-lyv~d~~~~~~I~~~~~-~-g~~~---~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 147 DVAVEPSTGA-VFVSDGYCNSRIVQFSP-S-GKFV---TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRI 220 (329)
T ss_dssp EEEECTTTCC-EEEEECSSCCEEEEECT-T-SCEE---EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEeCCCCe-EEEEeCCCCCeEEEEcC-C-CCEE---EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEE
Confidence 999999 665 777776 6899999995 3 3333 2222 1224488999999944499999999999
Q ss_pred EEEECCCCCCceEEe--ecCCCCEEEEEEcCCCCeEEEEeee---cccceEEEEEeCcCCc
Q 018235 302 AIWDTRVGKSALTSF--KAHNADVNVISWNRCWLAVCWHLEV---MMEHFLFMILDCSRGE 357 (359)
Q Consensus 302 ~iwD~r~~~~~~~~~--~~h~~~V~~i~~s~~~~~l~~~~~~---~~~d~~i~iwd~~~g~ 357 (359)
++||..++ +.+..+ ..+...+..++|+| +..+...... ......+.+|+..+|.
T Consensus 221 ~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 221 QCFKTDTK-EFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp EEEETTTC-CEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCC
T ss_pred EEEECCCC-cEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCe
Confidence 99999866 566666 35667889999999 4433333211 1123468888877665
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.97 E-value=6.4e-08 Score=85.89 Aligned_cols=155 Identities=10% Similarity=0.045 Sum_probs=112.2
Q ss_pred CCCceeeEEEe-CCCCcEEEEEeC-CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-CCCCceEEEEeCCC
Q 018235 164 HQGCVNRIRAM-TQNPHICASWAD-TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGYAIDWNPI 240 (359)
Q Consensus 164 H~~~V~~i~~~-p~~~~~lat~s~-dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~ 240 (359)
|...+..+++. +++ .++++... ++.|++|+... ..+..+. .+.....+|+++++
T Consensus 75 ~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~~g----------------------~~~~~~~~~~~~~~~~i~~~~~ 131 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQYG----------------------QFVRKFGATILQHPRGVTVDNK 131 (286)
T ss_dssp CBSSEEEEEEETTTT-EEEEEECGGGCEEEEECTTS----------------------CEEEEECTTTCSCEEEEEECTT
T ss_pred cccCceEEEEEcCCC-eEEEEcCCCCCEEEEECCCC----------------------cEEEEecCccCCCceEEEEeCC
Confidence 44578889995 566 67776643 78999999433 3333442 23456889999999
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCcceecCcccc--CCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec
Q 018235 241 TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI--GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (359)
+. ++++...++.|.+|+.. +... ..+. ++...+..|+++|++. ++++.+.++.|++||... ..+..+..
T Consensus 132 g~-l~v~~~~~~~i~~~~~~--g~~~---~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g--~~~~~~~~ 202 (286)
T 1q7f_A 132 GR-IIVVECKVMRVIIFDQN--GNVL---HKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEG--QYLRQIGG 202 (286)
T ss_dssp SC-EEEEETTTTEEEEECTT--SCEE---EEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTC--CEEEEESC
T ss_pred CC-EEEEECCCCEEEEEcCC--CCEE---EEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCC--CEEEEEcc
Confidence 87 88888888999999964 3322 2222 4556789999999998 888888899999999754 45555543
Q ss_pred C--CCCEEEEEEcCCCCeEEEEeeecccce-EEEEEeCc
Q 018235 319 H--NADVNVISWNRCWLAVCWHLEVMMEHF-LFMILDCS 354 (359)
Q Consensus 319 h--~~~V~~i~~s~~~~~l~~~~~~~~~d~-~i~iwd~~ 354 (359)
+ ...+..|+++++|.+++.+.. ++ .|.+|+..
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~----~~~~i~~~~~~ 237 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNH----NNFNLTIFTQD 237 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECS----SSCEEEEECTT
T ss_pred CCccCCCcEEEECCCCCEEEEeCC----CCEEEEEECCC
Confidence 3 357899999999987777654 44 79999864
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.97 E-value=2.3e-07 Score=84.12 Aligned_cols=159 Identities=8% Similarity=0.024 Sum_probs=105.0
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCC----CcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec--CCCCceEEEE
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGYAID 236 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~ 236 (359)
.+...+.++.++|++ .++++...+ +.|.+||... ......+. .+...+.++.
T Consensus 84 ~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~~~~~~~~~i~ 141 (333)
T 2dg1_A 84 SHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENG---------------------DNLQDIIEDLSTAYCIDDMV 141 (333)
T ss_dssp CSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTS---------------------CSCEEEECSSSSCCCEEEEE
T ss_pred CCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCC---------------------CEEEEEEccCccCCcccceE
Confidence 567889999999998 677776665 6899999876 12211221 2345788999
Q ss_pred eCCCCCCeEEEEcC------CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC
Q 018235 237 WNPITTGRLVTGDC------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (359)
Q Consensus 237 ~sp~~~~~l~sgs~------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (359)
++|++. ++++... .+.|..++... +... .+..+...+..++|+|++..++++.+.++.|.+||++...
T Consensus 142 ~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~-~~~~----~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g 215 (333)
T 2dg1_A 142 FDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF-RTVT----PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDG 215 (333)
T ss_dssp ECTTSC-EEEEECCCBTTBCCEEEEEECTTS-CCEE----EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred ECCCCC-EEEEeccccccCCCceEEEEeCCC-CEEE----EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC
Confidence 999987 6666553 24566666543 2322 2222334578999999998455666678999999997421
Q ss_pred CceEEe--------ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 311 SALTSF--------KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 311 ~~~~~~--------~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
..+..+ ..+ ..+..++++++|.+++.... ++.|.+|+..
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~----~~~v~~~d~~ 262 (333)
T 2dg1_A 216 VTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYG----QGRVLVFNKR 262 (333)
T ss_dssp SSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEET----TTEEEEECTT
T ss_pred cCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcC----CCEEEEECCC
Confidence 222111 122 35788999999987666543 5668888874
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.95 E-value=7.5e-08 Score=89.10 Aligned_cols=67 Identities=7% Similarity=-0.007 Sum_probs=53.3
Q ss_pred EEecCCCCCEEEEEeC----------CCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEE
Q 018235 282 LQWSPTEPDVFASCSV----------DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMIL 351 (359)
Q Consensus 282 v~~sp~~~~~las~s~----------Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iw 351 (359)
++|+|++..++++.+. .+.|.+||+.+. +.+.++..+. +..|+|+|+|++++... .+.|.+|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~--p~~ia~spdg~~l~v~n-----~~~v~v~ 330 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD--ALSMTIDQQRNLMLTLD-----GGNVNVY 330 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT--CCEEEEETTTTEEEEEC-----SSCEEEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC--eeEEEECCCCCEEEEeC-----CCeEEEE
Confidence 6889998856666551 347999999997 7777887776 99999999999776543 1779999
Q ss_pred eCcCC
Q 018235 352 DCSRG 356 (359)
Q Consensus 352 d~~~g 356 (359)
|..++
T Consensus 331 D~~t~ 335 (361)
T 2oiz_A 331 DISQP 335 (361)
T ss_dssp ECSSS
T ss_pred ECCCC
Confidence 99988
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.95 E-value=9.6e-08 Score=85.03 Aligned_cols=168 Identities=12% Similarity=-0.019 Sum_probs=118.9
Q ss_pred CCeEEEEEecCC-CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC-Cc
Q 018235 154 TPILQLRKVAHQ-GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK-DE 231 (359)
Q Consensus 154 ~~~~~~~~~~H~-~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~ 231 (359)
+..+.-++..+. ..++.+.+.|++ ++++ +.++.|+.||. . ++.+..+..+. ..
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~---------------------G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-D---------------------GRELWNIAAPAGCE 78 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-T---------------------SCEEEEEECCTTCE
T ss_pred CCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-C---------------------CCEEEEEcCCCCcc
Confidence 444545555555 578999999999 7777 34678999998 4 45666776653 47
Q ss_pred eEEEEeCCCCCCeEEEEcC-CCcEEEEecCCCCcceecCccc----cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 232 GYAIDWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPF----IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 232 v~~l~~sp~~~~~l~sgs~-dg~I~lwd~~~~~~~~~~~~~~----~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
++++.+.+++. +|++.+. ++.|..++. . ++.+.. ..+ .++......+++.+++. ++++.+.++.|..||.
T Consensus 79 ~~~~~~~~dG~-~lv~~~~~~~~v~~vd~-~-Gk~l~~-~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 79 MQTARILPDGN-ALVAWCGHPSTILEVNM-K-GEVLSK-TEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAP 153 (276)
T ss_dssp EEEEEECTTSC-EEEEEESTTEEEEEECT-T-SCEEEE-EEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECT
T ss_pred ccccEECCCCC-EEEEecCCCCEEEEEeC-C-CCEEEE-EeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECC
Confidence 88999999998 8877766 677777775 3 443210 111 11222445567889998 9999999999999998
Q ss_pred CCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 307 RVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 307 r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
. + +.+.++... ..+.++...+++.+++.+.. ++.|..++..+|++
T Consensus 154 ~-G-~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~----~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 154 N-G-QLLNSVKLS-GTPFSSAFLDNGDCLVACGD----AHCFVQLNLESNRI 198 (276)
T ss_dssp T-S-CEEEEEECS-SCCCEEEECTTSCEEEECBT----TSEEEEECTTTCCE
T ss_pred C-C-CEEEEEECC-CCccceeEcCCCCEEEEeCC----CCeEEEEeCcCCcE
Confidence 7 6 777777654 34566788899998887765 56788888887764
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.95 E-value=1.3e-08 Score=92.92 Aligned_cols=144 Identities=8% Similarity=-0.005 Sum_probs=87.8
Q ss_pred eeeEEEeCCCCcEEEEEeC--------------------------CCcEEEEECCCCccccccccccccCCCCCCCCCCC
Q 018235 168 VNRIRAMTQNPHICASWAD--------------------------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP 221 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~--------------------------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (359)
+..++|+|++..++++... ...|++||+.. ...
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~---------------------~~~ 164 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES---------------------EEV 164 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT---------------------TEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC---------------------CeE
Confidence 9999999999444444322 25688888865 222
Q ss_pred cEEecCCCCceEEEEeCCCCCCeEEEEcCCC-------cEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEE
Q 018235 222 LVKFGGHKDEGYAIDWNPITTGRLVTGDCNS-------CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFAS 294 (359)
Q Consensus 222 ~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg-------~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las 294 (359)
+..+.. . .+..++|+|++ +++++..++ ...||.+. .+.. ..+..+ ..+..+ +|++. .|+.
T Consensus 165 ~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~~~~----~~l~~~-~~~~~~--spdg~-~l~~ 231 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-DGKE----EKMFEK-VSFYAV--DSDGE-RILL 231 (347)
T ss_dssp EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-TTEE----EEEEEE-ESEEEE--EECSS-CEEE
T ss_pred EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC-CCce----EEeccC-cceeeE--CCCCC-EEEE
Confidence 123333 2 67789999998 666665442 44555544 3443 233334 445444 99999 5555
Q ss_pred EeCC--------CcEEEEECCCCCCceEEe-ecCCCCEEE-EEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 295 CSVD--------GHIAIWDTRVGKSALTSF-KAHNADVNV-ISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 295 ~s~D--------g~I~iwD~r~~~~~~~~~-~~h~~~V~~-i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
++.+ ..|.+|| ++ . ...+ ..|...+.. +.|+ ++ +++.... ++.+++| ...|
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~~-~-~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~----~~~~~l~-~~~g 292 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--GK-E-VMGILDEVDRGVGQAKIKD-GK-VYFTLFE----EGSVNLY-IWDG 292 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--SS-C-EEESSTTCCSEEEEEEEET-TE-EEEEEEE----TTEEEEE-EESS
T ss_pred EEccccCCccccceEEEEC--CC-c-eEeccccCCcccCCccEEc-Cc-EEEEEec----CCcEEEE-EcCC
Confidence 5533 4688888 33 3 3333 455677886 9999 87 5555544 5677888 6544
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.93 E-value=2e-08 Score=101.16 Aligned_cols=167 Identities=8% Similarity=-0.054 Sum_probs=104.3
Q ss_pred cCCCceeeEEEeCCCCcEEEE----EeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCc-E-EecCCCCceEEEE
Q 018235 163 AHQGCVNRIRAMTQNPHICAS----WADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL-V-KFGGHKDEGYAID 236 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat----~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~h~~~v~~l~ 236 (359)
+|...+..++|+|+|..++++ |+++.+|++||+.. ++.+ . .+... ...+++
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t---------------------g~~~~~~~~~~~--~~~~~~ 174 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS---------------------GEWSKVDVIEGG--KYATPK 174 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT---------------------CCBCSSCCBSCC--TTCCCE
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC---------------------CCCcCCcccCcc--cccceE
Confidence 466679999999999444433 33446899999987 2221 0 11111 125799
Q ss_pred eCCCCCCeEEEEcCCCc-------------EEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-C--c
Q 018235 237 WNPITTGRLVTGDCNSC-------------IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-G--H 300 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~-------------I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g--~ 300 (359)
|+|+++ .|+.++.+.. |++|++.++............|...+..+.|||+|..++++.... + .
T Consensus 175 wspDg~-~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 175 WTPDSK-GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEND 253 (695)
T ss_dssp ECTTSS-EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEE
T ss_pred EecCCC-EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceE
Confidence 999998 7888877766 999999764311100122334556889999999999444444333 2 5
Q ss_pred EEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 301 IAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 301 I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|.+|+..++ ....+..+...+....| +++. +++.......+..|.+|+..++.
T Consensus 254 l~~~~~~~~--~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 254 VYWKRPGEK--DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEECTTCS--SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEcCCCC--ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 666665443 45556556666666667 4566 44443322235788999987654
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.91 E-value=5.7e-08 Score=97.78 Aligned_cols=175 Identities=7% Similarity=-0.054 Sum_probs=115.7
Q ss_pred eEEEEEecCCCceeeEEEeCCCCcEEEEEeCC-C--cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCce
Q 018235 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADT-G--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEG 232 (359)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~d-g--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 232 (359)
.+......|...+..+.|+|++..++++.... + .|++|+... .....+..+...+
T Consensus 217 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~----------------------~~~~~l~~~~~~~ 274 (695)
T 2bkl_A 217 TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE----------------------KDFRLLVKGVGAK 274 (695)
T ss_dssp EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC----------------------SSCEEEEECSSCC
T ss_pred eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC----------------------CceEEeecCCCce
Confidence 34444445777889999999996555554443 3 455554322 2334455555556
Q ss_pred EEEEeCCCCCCeEEEEc---CCCcEEEEecCCCCcceecCccccCC--CCCeEEEEecCCCCCEEEEEeCCCcEEEEECC
Q 018235 233 YAIDWNPITTGRLVTGD---CNSCIYLWEPASDATWNVDPNPFIGH--SASVEDLQWSPTEPDVFASCSVDGHIAIWDTR 307 (359)
Q Consensus 233 ~~l~~sp~~~~~l~sgs---~dg~I~lwd~~~~~~~~~~~~~~~~h--~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r 307 (359)
....| +++. ++++.. .++.|.+|++.++.... ...+..| ...+.+++|+ .+. ++++...|+..+||.+.
T Consensus 275 ~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~--~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 275 YEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS--WKEIVPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG--CEEEECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEE
T ss_pred EEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC--CeEEecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEe
Confidence 66667 5666 666655 35789999987643200 1223333 4568889998 444 89999999998888665
Q ss_pred CCCCceEEeecC-CCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 308 VGKSALTSFKAH-NADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 308 ~~~~~~~~~~~h-~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
........+..+ ...|..++++|++..+++...+...+..|.+|+..+++.
T Consensus 349 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 349 LKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 221445555544 566888899999998888777777788999999887753
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.90 E-value=6.2e-07 Score=87.91 Aligned_cols=171 Identities=11% Similarity=0.023 Sum_probs=115.9
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC----
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN---- 238 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s---- 238 (359)
.....+..+.++|++ .++++++.++.|.+||+... ..+.+..+... ..-..++|+
T Consensus 194 ~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~-------------------t~~~v~~i~~G-~~P~~ia~s~~~~ 252 (567)
T 1qks_A 194 DTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMK-------------------EPTTVAEIKIG-SEARSIETSKMEG 252 (567)
T ss_dssp ECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSS-------------------SCCEEEEEECC-SEEEEEEECCSTT
T ss_pred eCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCC-------------------CCcEeEEEecC-CCCceeEEccccC
Confidence 444467789999999 56666788999999999510 13444555432 245689999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCccee--cCccc--c---CCC-CCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNV--DPNPF--I---GHS-ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~--~~~~~--~---~h~-~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (359)
|+++..+++...+++|.++|..+ .+.+. ..... . .|. ..+..+..++.++.++++...+|.|.++|.....
T Consensus 253 pDGk~l~v~n~~~~~v~ViD~~t-~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~ 331 (567)
T 1qks_A 253 WEDKYAIAGAYWPPQYVIMDGET-LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN 331 (567)
T ss_dssp CTTTEEEEEEEETTEEEEEETTT-CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS
T ss_pred CCCCEEEEEEccCCeEEEEECCC-CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc
Confidence 69984444555568999999876 33321 00110 0 122 2678899999888677777888999999998752
Q ss_pred CceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 311 SALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 311 ~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
...............+.|+|++++++..... .+.|.++|..++++
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~kl 376 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGKL 376 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTEE
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCC---CCeEEEEECCCCcE
Confidence 2221122334457788999999998877643 67789999988764
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.87 E-value=1.5e-07 Score=82.48 Aligned_cols=159 Identities=8% Similarity=-0.098 Sum_probs=111.6
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
..++.+.+.+++ .++++...++.|.+|+... ...............+|++++++. ++
T Consensus 108 ~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~---------------------~~~~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 108 NYPEGLAVDTQG-AVYVADRGNNRVVKLAAGS---------------------KTQTVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp SSEEEEEECTTC-CEEEEEGGGTEEEEECTTC---------------------CSCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred CCCcceEECCCC-CEEEEECCCCEEEEEECCC---------------------ceeEeeccccCCCceeEEEeCCCC-EE
Confidence 568899999988 6888777788999996544 111111112223567899999987 78
Q ss_pred EEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEE
Q 018235 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV 325 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~ 325 (359)
++...++.|.+|+.... ... .....+...+.+|++++++. ++++...++.|.+||.... ........+-..+.+
T Consensus 165 v~~~~~~~i~~~~~~~~-~~~---~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~p~~ 238 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESN-NQV---VLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGST-TSTVLPFTGLNTPLA 238 (270)
T ss_dssp EEEGGGTEEEEECTTTC-CEE---ECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCS-CCEECCCCSCSCEEE
T ss_pred EEECCCCEEEEEecCCC-ceE---eecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCC-cceeeccCCCCCcee
Confidence 87777889999998653 222 11122336789999999996 8888888999999998764 222211233356899
Q ss_pred EEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 326 ISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 326 i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
|+++++|.+++.+.. ++.|++++....+
T Consensus 239 i~~~~~g~l~v~~~~----~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 239 VAVDSDRTVYVADRG----NDRVVKLTSLEHH 266 (270)
T ss_dssp EEECTTCCEEEEEGG----GTEEEEECCCGGG
T ss_pred EEECCCCCEEEEECC----CCEEEEEcCCCcc
Confidence 999999986666544 7789999876543
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.86 E-value=1.5e-07 Score=84.11 Aligned_cols=159 Identities=9% Similarity=0.063 Sum_probs=106.0
Q ss_pred CceeeEEEeCCCCcEEEEEeCC---------------CcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADT---------------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD 230 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~d---------------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 230 (359)
..++.+++.|++ .+++|-+.. +.-.||.+.. . ..+..+..+..
T Consensus 115 ~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~--------------------~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 115 NSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP--------------------D-GTLSAPIRDRV 172 (296)
T ss_dssp CCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT--------------------T-SCEEEEECCCS
T ss_pred CCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECC--------------------C-CCEEEeecCCC
Confidence 356789999999 677763211 1124444443 1 12233445556
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcc-eecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCC
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATW-NVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (359)
...+++|+|++. .|++.+.++.|.+|++...+.. .. ...+..+...+..+++++++. ++++. ++.|.+||.. +
T Consensus 173 ~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~-~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g 246 (296)
T 3e5z_A 173 KPNGLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQ-GVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPD-G 246 (296)
T ss_dssp SEEEEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEE-EEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTT-S
T ss_pred CCccEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCC-CeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCC-C
Confidence 778999999998 6688888899999999733443 10 122233455677899999998 76666 7899999987 3
Q ss_pred CCceEEeecCCCCEEEEEE-cCCCCeEEEEeeecccceEEEEEeCcCCccC
Q 018235 310 KSALTSFKAHNADVNVISW-NRCWLAVCWHLEVMMEHFLFMILDCSRGEIR 359 (359)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~-s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v~ 359 (359)
+.+..+..+.. +++++| .|++..|..+.. ++ +..++..+..++
T Consensus 247 -~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~----~~-l~~~~~~~~~~~ 290 (296)
T 3e5z_A 247 -DELGRVLTPQT-TSNLCFGGPEGRTLYMTVS----TE-FWSIETNVRGLE 290 (296)
T ss_dssp -CEEEEEECSSC-CCEEEEESTTSCEEEEEET----TE-EEEEECSCCBCC
T ss_pred -CEEEEEECCCC-ceeEEEECCCCCEEEEEcC----Ce-EEEEEccccccc
Confidence 56667776766 899999 588887776654 44 344566666553
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.83 E-value=3.9e-07 Score=79.81 Aligned_cols=158 Identities=6% Similarity=-0.096 Sum_probs=108.6
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-CCCCceEEEEeCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGYAIDWNPITT 242 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~ 242 (359)
+...+..+++.+++ .++++.. ++.|.+||.... ....+. .......+|++++++.
T Consensus 65 ~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~----------------------~~~~~~~~~~~~p~~i~~~~~g~ 120 (270)
T 1rwi_B 65 GLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSN----------------------NQTVLPFDGLNYPEGLAVDTQGA 120 (270)
T ss_dssp SCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCS----------------------CCEECCCCSCSSEEEEEECTTCC
T ss_pred CcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCc----------------------eEeeeecCCcCCCcceEECCCCC
Confidence 34567889999988 5766666 889999997651 122222 2224678999999987
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (359)
++++...++.|.+|+.... ... .........+.+++++|++. ++++...++.|.+||.... ........+...
T Consensus 121 -l~v~~~~~~~i~~~~~~~~-~~~---~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~ 193 (270)
T 1rwi_B 121 -VYVADRGNNRVVKLAAGSK-TQT---VLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESN-NQVVLPFTDITA 193 (270)
T ss_dssp -EEEEEGGGTEEEEECTTCC-SCE---ECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTC-CEEECCCSSCCS
T ss_pred -EEEEECCCCEEEEEECCCc-eeE---eeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCC-ceEeecccCCCC
Confidence 7787777889999976542 211 11122334678899999998 8888888899999998875 322222233366
Q ss_pred EEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 323 VNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 323 V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
+..|+++++|.+++.+.. ++.|.+|+....
T Consensus 194 p~~i~~d~~g~l~v~~~~----~~~v~~~~~~~~ 223 (270)
T 1rwi_B 194 PWGIAVDEAGTVYVTEHN----TNQVVKLLAGST 223 (270)
T ss_dssp EEEEEECTTCCEEEEETT----TSCEEEECTTCS
T ss_pred ceEEEECCCCCEEEEECC----CCcEEEEcCCCC
Confidence 899999999966655543 556888887543
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.80 E-value=5.7e-09 Score=96.70 Aligned_cols=159 Identities=8% Similarity=-0.022 Sum_probs=100.5
Q ss_pred eeeEEEeCCCCcEEEEEeCCC--cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCc-eEEEEeCCCCCCe
Q 018235 168 VNRIRAMTQNPHICASWADTG--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDE-GYAIDWNPITTGR 244 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~sp~~~~~ 244 (359)
+..++|+|++..++++...+| .|.+||+.. ... ..+..+... ...+.|+|++. +
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~---------------------~~~-~~l~~~~~~~~~~~~~spdg~-~ 94 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET---------------------QQA-VQLTEGKGDNTFGGFISTDER-A 94 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTT---------------------TEE-EECCCSSCBCTTTCEECTTSS-E
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCC---------------------CcE-EEeecCCCCccccceECCCCC-E
Confidence 788999999955555544444 677778765 222 222222223 33488999998 8
Q ss_pred EEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEE-------------------EEecCCCCCEEEEE-----eCCCc
Q 018235 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVED-------------------LQWSPTEPDVFASC-----SVDGH 300 (359)
Q Consensus 245 l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~-------------------v~~sp~~~~~las~-----s~Dg~ 300 (359)
|+.++.++.|++|++.. +... ..+..+.....+ +.|+|++. .++.+ ..+..
T Consensus 95 l~~~~~~~~l~~~d~~~-~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 95 FFYVKNELNLMKVDLET-LEEQ---VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCR 169 (396)
T ss_dssp EEEEETTTEEEEEETTT-CCEE---EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEE
T ss_pred EEEEEcCCcEEEEECCC-CCcE---EEEecccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcce
Confidence 98888888999999976 3322 122223332223 35677776 44332 45678
Q ss_pred EEEEECCCCCCceEEeecCCCCEEEEEEcC-CCCeEEEEeeecccc---eEEEEEeCcCCc
Q 018235 301 IAIWDTRVGKSALTSFKAHNADVNVISWNR-CWLAVCWHLEVMMEH---FLFMILDCSRGE 357 (359)
Q Consensus 301 I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~~~~~~~~~d---~~i~iwd~~~g~ 357 (359)
|.+||+.++ . ...+..+...+..+.|+| ++..+++.... ..+ ..|.+|+...+.
T Consensus 170 l~~~d~~~g-~-~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~-~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 170 LIKVDIETG-E-LEVIHQDTAWLGHPIYRPFDDSTVGFCHEG-PHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp EEEEETTTC-C-EEEEEEESSCEEEEEEETTEEEEEEEEECS-CSSSCSCCCEEEETTSCC
T ss_pred EEEEECCCC-c-EEeeccCCcccccceECCCCCCEEEEEecC-CCCCCCceEEEEECCCCc
Confidence 999999886 3 334445677899999999 78877766431 111 457778876543
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.74 E-value=7.8e-07 Score=90.17 Aligned_cols=175 Identities=7% Similarity=0.005 Sum_probs=113.1
Q ss_pred EEEEEecCCCceeeEEEeCCCCcEEEEEeC----CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCce
Q 018235 157 LQLRKVAHQGCVNRIRAMTQNPHICASWAD----TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEG 232 (359)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~----dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 232 (359)
+......|...+..+.|+|+|..++++... ...|++||+.... ..+...+..+....
T Consensus 259 lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~-------------------~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 259 PVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK-------------------IGPVTALIPDLKAQ 319 (741)
T ss_dssp EEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTE-------------------ECCCEEEECSSSSC
T ss_pred EEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCC-------------------CcccEEecCCCCce
Confidence 333333444568899999999544444432 3489999987610 02134455555444
Q ss_pred EEEEeCCCCCCeEEEEcC----CCcEEEEecCCC-CcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECC
Q 018235 233 YAIDWNPITTGRLVTGDC----NSCIYLWEPASD-ATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTR 307 (359)
Q Consensus 233 ~~l~~sp~~~~~l~sgs~----dg~I~lwd~~~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r 307 (359)
.... +|++. .|+..+. ++.|.+|++..+ ..+. ..+..+...+.+++|+ .+. ++++...|+..+||.+.
T Consensus 320 ~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~---~l~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 320 WDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGSTPRFD---TVVPESKDNLESVGIA-GNR-LFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSSCEEE---EEECCCSSEEEEEEEE-BTE-EEEEEEETTEEEEEEEE
T ss_pred EEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCccccE---EEecCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEe
Confidence 4443 47887 6666654 345999998763 2332 2233445567788887 344 88999999988887654
Q ss_pred CCCCceEEeec-CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 308 VGKSALTSFKA-HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 308 ~~~~~~~~~~~-h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
........+.. +...|..++|+|++..+++...+...+..+.+|+..+++
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 22144555543 356789999999998888777666678899999988765
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.74 E-value=1.1e-07 Score=86.48 Aligned_cols=149 Identities=11% Similarity=0.074 Sum_probs=91.7
Q ss_pred CceeeEEEeCCCCcEEEEEeCC---Cc--EEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADT---GH--VQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~d---g~--V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 240 (359)
+.+..++|+|++ ..||..+.+ +. |.+|++.. .........+ . +.++.|+|+
T Consensus 59 ~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~---------------------g~~~~l~~~~-~-~~~~~wspd 114 (347)
T 2gop_A 59 ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLET---------------------LSSKKILEAK-N-IRSLEWNED 114 (347)
T ss_dssp ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTT---------------------TEEEEEEEES-E-EEEEEECTT
T ss_pred ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCC---------------------CceEEEEcCC-C-ccceeECCC
Confidence 568889999999 455544432 34 66777765 2333333222 3 889999999
Q ss_pred CCCeEEEEcC---------------------------CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEE
Q 018235 241 TTGRLVTGDC---------------------------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293 (359)
Q Consensus 241 ~~~~l~sgs~---------------------------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~la 293 (359)
+. .|+.++. ...|++|++.. +... ..+.. . .+..++|+|++ +++
T Consensus 115 g~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~-~~~~---~~l~~-~-~~~~~~~spdg--~~~ 185 (347)
T 2gop_A 115 SR-KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES-EEVI---EEFEK-P-RFSSGIWHRDK--IVV 185 (347)
T ss_dssp SS-EEEEEEECCCC---------CCCC---------CEEEEEEEETTT-TEEE---EEEEE-E-TTCEEEEETTE--EEE
T ss_pred CC-EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC-CeEE---eeecC-C-CcccccCCCCe--EEE
Confidence 98 7776653 25689999876 4431 12333 3 78899999999 666
Q ss_pred EEeCCC-------cEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecc----cceEEEEEe
Q 018235 294 SCSVDG-------HIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMM----EHFLFMILD 352 (359)
Q Consensus 294 s~s~Dg-------~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~----~d~~i~iwd 352 (359)
+++.++ ...||.+.+ .....+..+ ..+.. ++|+|+.|++...... ....|.+|+
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d~--~~~~~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWED--GKEEKMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEET--TEEEEEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EEecccccccccccccEEEeCC--CceEEeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC
Confidence 665442 344444443 334445444 44554 4999998887654211 134677777
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.73 E-value=2.2e-06 Score=75.77 Aligned_cols=165 Identities=7% Similarity=-0.039 Sum_probs=112.3
Q ss_pred EEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC
Q 018235 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (359)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (359)
..+..+...+.++.+.+++ .++++...++.|.+||.... .....+..+...+.+|+++
T Consensus 8 ~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~~~---------------------~~~~~~~~~~~~~~~i~~~ 65 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKG-KVWITQHKANMISCINLDGK---------------------ITEYPLPTPDAKVMCLTIS 65 (299)
T ss_dssp EECCSSSCCEEEEEECTTS-CEEEEETTTTEEEEECTTCC---------------------EEEEECSSTTCCEEEEEEC
T ss_pred EcCCCcCCCccceEECCCC-CEEEEecCCCcEEEEcCCCC---------------------eEEecCCcccCceeeEEEC
Confidence 3444556789999999999 67777666789999987631 0011122234578899999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec
Q 018235 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 239 p~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (359)
+++. ++++...++.|..|+.. +.... ..+......+.+++++|++. ++++...++.|.+||. .+.........
T Consensus 66 ~~g~-l~v~~~~~~~i~~~~~~--g~~~~--~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~ 138 (299)
T 2z2n_A 66 SDGE-VWFTENAANKIGRITKK--GIIKE--YTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPN 138 (299)
T ss_dssp TTSC-EEEEETTTTEEEEECTT--SCEEE--EECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred CCCC-EEEeCCCCCeEEEECCC--CcEEE--EeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCC
Confidence 9987 77777778899999975 22210 11223456789999999987 8888777889999998 44122222233
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 319 HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 319 h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+...++.+++.+++.+.+.... .+.|..|+. ++.
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~~~-~g~ 172 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQ----NNAIGRITE-SGD 172 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETT----TTEEEEECT-TCC
T ss_pred CCCCCceEEEcCCCCEEEEeCC----CCEEEEEcC-CCc
Confidence 4567899999999976665532 455777776 443
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.69 E-value=2.5e-07 Score=93.78 Aligned_cols=167 Identities=10% Similarity=-0.014 Sum_probs=101.3
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCC----cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTG----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 239 (359)
|...+..++|+|+|..++.+.+..| +|++||+.. +..+.. ..+...+.+++|+|
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t---------------------g~~~~~-~~~~~~~~~~~wsp 218 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD---------------------GKPLAD-ELKWVKFSGLAWLG 218 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT---------------------CCEEEE-EEEEEESCCCEEST
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC---------------------CCCCCc-cCCCceeccEEEEC
Confidence 4457889999999944444443334 599999987 232221 11111235789999
Q ss_pred CCCCeEEEEcCCCc--------------EEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-----Cc
Q 018235 240 ITTGRLVTGDCNSC--------------IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GH 300 (359)
Q Consensus 240 ~~~~~l~sgs~dg~--------------I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~ 300 (359)
+ . .|+.++.++. |++|++.++............+...+..+.|||+|. .|+..+.+ ..
T Consensus 219 D-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~ 295 (741)
T 1yr2_A 219 N-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNT 295 (741)
T ss_dssp T-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCE
T ss_pred C-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcce
Confidence 9 7 6666665544 889998653211000011223334588999999999 55555543 37
Q ss_pred EEEEECCCCCCc-eEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 301 IAIWDTRVGKSA-LTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 301 I~iwD~r~~~~~-~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
|++||+.++... ...+..+...+.... .|++..|++..........|.+|+..++
T Consensus 296 l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 296 VHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 999999875113 455655555555543 4888887776543333567888887653
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.69 E-value=2.8e-07 Score=81.98 Aligned_cols=143 Identities=8% Similarity=0.000 Sum_probs=105.1
Q ss_pred cEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC-CceEEEEeCCCCCCeEEEEcCCCcEEEE
Q 018235 179 HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK-DEGYAIDWNPITTGRLVTGDCNSCIYLW 257 (359)
Q Consensus 179 ~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sgs~dg~I~lw 257 (359)
++|++++.++.|++||..+ ++.+..+..+. ..++++.++|++. +|++ .++.|..|
T Consensus 6 ~~lv~~~~~~~v~~~d~~t---------------------G~~~w~~~~~~~~~~~~~~~~pdG~-ilvs--~~~~V~~~ 61 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDT---------------------KEIVWEYPLEKGWECNSVAATKAGE-ILFS--YSKGAKMI 61 (276)
T ss_dssp EEEEECTTCSEEEEEETTT---------------------TEEEEEEECCTTCCCCEEEECTTSC-EEEE--CBSEEEEE
T ss_pred cEEEeeCCCCEEEEEECCC---------------------CeEEEEeCCCccCCCcCeEECCCCC-EEEe--CCCCEEEE
Confidence 6899999999999999866 56777887766 4788999999997 7773 47789999
Q ss_pred ecCCCCcceecCccccCC-CCCeEEEEecCCCCCEEEEEeC-CCcEEEEECCCCCCceEEeec------CCCCEEEEEEc
Q 018235 258 EPASDATWNVDPNPFIGH-SASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTSFKA------HNADVNVISWN 329 (359)
Q Consensus 258 d~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~~~~------h~~~V~~i~~s 329 (359)
|. + ++.+ ..+..+ ...+.++++.|++. ++++.+. ++.|..+|. .+ +.+..+.. +......+++.
T Consensus 62 d~-~-G~~~---W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~-~G-k~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 62 TR-D-GREL---WNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNM-KG-EVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp CT-T-SCEE---EEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECT-TS-CEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred CC-C-CCEE---EEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeC-CC-CEEEEEeccCCCCcccccccCceEC
Confidence 98 5 4433 334433 35788999999999 7777776 778888875 44 55555531 11234556788
Q ss_pred CCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 330 RCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 330 ~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
++|.+++.... ++.|..||.. |++
T Consensus 134 ~~G~~lv~~~~----~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 134 KKGNYLVPLFA----TSEVREIAPN-GQL 157 (276)
T ss_dssp TTSCEEEEETT----TTEEEEECTT-SCE
T ss_pred CCCCEEEEecC----CCEEEEECCC-CCE
Confidence 99998877654 6788899887 653
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.68 E-value=4.1e-06 Score=74.01 Aligned_cols=159 Identities=7% Similarity=-0.060 Sum_probs=109.9
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
+...+..+.+.+++ .++++...++.|..|+.... .....+......+.+|.+.+++.
T Consensus 55 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~---------------------~~~~~~~~~~~~~~~i~~~~~g~- 111 (299)
T 2z2n_A 55 PDAKVMCLTISSDG-EVWFTENAANKIGRITKKGI---------------------IKEYTLPNPDSAPYGITEGPNGD- 111 (299)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSC---------------------EEEEECSSTTCCEEEEEECTTSC-
T ss_pred ccCceeeEEECCCC-CEEEeCCCCCeEEEECCCCc---------------------EEEEeCCCcCCCceeeEECCCCC-
Confidence 45778999999988 67777677888999987531 00111222345688999999886
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceE-EeecCCCC
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNAD 322 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~-~~~~h~~~ 322 (359)
++++...++.|.+|+. . +.... .....+...+..++++|++. ++++...++.|.+||. ++ .... .+..+...
T Consensus 112 l~v~~~~~~~i~~~d~-~-g~~~~--~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g-~~~~~~~~~~~~~ 184 (299)
T 2z2n_A 112 IWFTEMNGNRIGRITD-D-GKIRE--YELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SG-DITEFKIPTPASG 184 (299)
T ss_dssp EEEEETTTTEEEEECT-T-CCEEE--EECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TC-CEEEEECSSTTCC
T ss_pred EEEEecCCceEEEECC-C-CCEEE--ecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CC-cEEEeeCCCCCCc
Confidence 7777777889999998 4 33221 12223456789999999997 8887777889999998 54 3222 12334566
Q ss_pred EEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 323 VNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 323 V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+..+++.+++.+.+.... .+.|.+|+. ++.
T Consensus 185 ~~~i~~~~~g~l~v~~~~----~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 185 PVGITKGNDDALWFVEII----GNKIGRITT-SGE 214 (299)
T ss_dssp EEEEEECTTSSEEEEETT----TTEEEEECT-TCC
T ss_pred ceeEEECCCCCEEEEccC----CceEEEECC-CCc
Confidence 889999999986655533 456777877 543
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.66 E-value=1e-05 Score=79.21 Aligned_cols=226 Identities=11% Similarity=0.048 Sum_probs=144.6
Q ss_pred CCCceeeeChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCC
Q 018235 45 EEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPN 124 (359)
Q Consensus 45 ~~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~ 124 (359)
..+....+|......+.++.+..-.-.+.+-||. .++.++. .++.|.++++..
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG-----------r~lyv~~-----~dg~V~viD~~~----------- 227 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG-----------RYLFVIG-----RDGKVNMIDLWM----------- 227 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-----------CEEEEEE-----TTSEEEEEETTS-----------
T ss_pred CCCeEEEEECCCCeEEEEEeCCCCccceEECCCC-----------CEEEEEc-----CCCeEEEEECCC-----------
Confidence 4567778888777778777777655567777775 3444454 356888887620
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEe----CCCCcEEEEEeCCCcEEEEECCCCcc
Q 018235 125 KPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAM----TQNPHICASWADTGHVQVWDLRSHLN 200 (359)
Q Consensus 125 ~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~----p~~~~~lat~s~dg~V~iwd~~~~~~ 200 (359)
.......+ +........+.|+ |++..++++....++|.|+|..+
T Consensus 228 ----------------------------~t~~~v~~-i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t--- 275 (567)
T 1qks_A 228 ----------------------------KEPTTVAE-IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET--- 275 (567)
T ss_dssp ----------------------------SSCCEEEE-EECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT---
T ss_pred ----------------------------CCCcEeEE-EecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC---
Confidence 02222222 2334456789999 68866677777789999999766
Q ss_pred ccccccccccCCCCCCCCCCCcEEecC----------CCC-ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecC
Q 018235 201 ALAESETIVGQGAPQVSNQSPLVKFGG----------HKD-EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP 269 (359)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h~~-~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~ 269 (359)
.+++.++.. |.. .+.++..++.++..+++....|.|.++|........ .
T Consensus 276 ------------------~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~--v 335 (567)
T 1qks_A 276 ------------------LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK--T 335 (567)
T ss_dssp ------------------CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE--E
T ss_pred ------------------CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce--e
Confidence 333333321 212 567888898877567777778999999986632222 1
Q ss_pred ccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec-----CCC-CEEEEEEcCCCCeEEEEeeecc
Q 018235 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-----HNA-DVNVISWNRCWLAVCWHLEVMM 343 (359)
Q Consensus 270 ~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~-----h~~-~V~~i~~s~~~~~l~~~~~~~~ 343 (359)
..+ .......++.|+|+++.+++++..++.|.++|+.++ +.+..+.. |.+ .++ + ++|++..+..... .
T Consensus 336 ~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~--~ 409 (567)
T 1qks_A 336 TEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGAN-F-VHPTFGPVWATSH--M 409 (567)
T ss_dssp EEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEE-E-EETTTEEEEEEEB--S
T ss_pred eee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCC-cEEEEEeccCcCCCCcccee-e-ECCCCCcEEEeCC--C
Confidence 122 234457789999999966777778899999999987 54444433 432 233 2 5787554433221 1
Q ss_pred cceEEEEEeCcC
Q 018235 344 EHFLFMILDCSR 355 (359)
Q Consensus 344 ~d~~i~iwd~~~ 355 (359)
.++.|.+++...
T Consensus 410 g~~~Vsvid~~~ 421 (567)
T 1qks_A 410 GDDSVALIGTDP 421 (567)
T ss_dssp SSSEEEEEECCT
T ss_pred CCCeEEEecCCC
Confidence 146788998765
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.65 E-value=8.2e-06 Score=76.69 Aligned_cols=158 Identities=11% Similarity=-0.024 Sum_probs=100.7
Q ss_pred EEEeCCCCcEEEEEeCCC--cEEEEECCCCccccccccccccCCCCCCCCCCCcEEe----cCCCCceEEEEeCCCCCCe
Q 018235 171 IRAMTQNPHICASWADTG--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF----GGHKDEGYAIDWNPITTGR 244 (359)
Q Consensus 171 i~~~p~~~~~lat~s~dg--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~sp~~~~~ 244 (359)
++|++++ ..++.+..++ .|.+|+.... .....+ ........+++++|.+. .
T Consensus 176 ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~---------------------~~~~~~g~~~~~~~~~p~~iav~p~~g-~ 232 (409)
T 3hrp_A 176 PAVTKDK-QRVYSIGWEGTHTVYVYMKASG---------------------WAPTRIGQLGSTFSGKIGAVALDETEE-W 232 (409)
T ss_dssp CEECTTS-SEEEEEBSSTTCEEEEEEGGGT---------------------TCEEEEEECCTTSCSCCCBCEECTTSS-E
T ss_pred eeEecCC-CcEEEEecCCCceEEEEEcCCC---------------------ceeEEeeeccchhcCCcEEEEEeCCCC-e
Confidence 8999998 5555555544 7888887641 111222 11334567899999554 5
Q ss_pred EEEEcCCCcEEEEecCCCCcceecCccccCCCCCe--EEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCC--
Q 018235 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASV--EDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN-- 320 (359)
Q Consensus 245 l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V--~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~-- 320 (359)
|+.+..++.|+.||+..............++...- ..++|+|.+..++++...++.|+.|+.... +..+.++.
T Consensus 233 lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~ 309 (409)
T 3hrp_A 233 LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQ 309 (409)
T ss_dssp EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTC
T ss_pred EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCC
Confidence 55577789999999876322111000012222222 389999965548888888999999987652 33333332
Q ss_pred -------------CCEEEEEEcCCCCeEEEEe-eecccceEEEEEeCcCCcc
Q 018235 321 -------------ADVNVISWNRCWLAVCWHL-EVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 321 -------------~~V~~i~~s~~~~~l~~~~-~~~~~d~~i~iwd~~~g~v 358 (359)
...+.|+|+++|.+++.+. . ++.|+.|+...|.+
T Consensus 310 ~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~----~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 310 KTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK----GYCLRKLDILDGYV 357 (409)
T ss_dssp CSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT----TCEEEEEETTTTEE
T ss_pred CCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC----CCEEEEEECCCCEE
Confidence 3478999999999776665 4 67899998665543
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.64 E-value=3e-06 Score=77.08 Aligned_cols=159 Identities=6% Similarity=-0.079 Sum_probs=105.7
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC-----CceEEEEe
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK-----DEGYAIDW 237 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~ 237 (359)
........+++++++ .++++...++.|.+||.... +....+.... .....|++
T Consensus 81 ~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~---------------------~~~~~i~~g~~~~~~~~p~~i~~ 138 (328)
T 3dsm_A 81 TGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTY---------------------EITGYIECPDMDMESGSTEQMVQ 138 (328)
T ss_dssp ECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTT---------------------EEEEEEECTTCCTTTCBCCCEEE
T ss_pred CCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCC---------------------eEEEEEEcCCccccCCCcceEEE
Confidence 445678899998888 77777668899999998862 2222222111 13445666
Q ss_pred CCCCCCeEEEEc-CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC----------CcEEEEEC
Q 018235 238 NPITTGRLVTGD-CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD----------GHIAIWDT 306 (359)
Q Consensus 238 sp~~~~~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D----------g~I~iwD~ 306 (359)
..+. ++++.. .++.|.++|+.+ ++.. ..+.. ......+.++|++. +++++..+ +.|.++|.
T Consensus 139 -~~~~-lyv~~~~~~~~v~viD~~t-~~~~---~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 139 -YGKY-VYVNCWSYQNRILKIDTET-DKVV---DELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp -ETTE-EEEEECTTCCEEEEEETTT-TEEE---EEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred -ECCE-EEEEcCCCCCEEEEEECCC-CeEE---EEEEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEEC
Confidence 2332 444443 488999999987 4433 22222 23456789999998 77777655 78999999
Q ss_pred CCCCCceEEeecC-CCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 307 RVGKSALTSFKAH-NADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 307 r~~~~~~~~~~~h-~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.+. +....+... ....+.++|+|++..+.+... .+.+||..++++
T Consensus 211 ~t~-~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 211 ETF-TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPVEADRV 256 (328)
T ss_dssp TTT-EEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEETTCSSC
T ss_pred CCC-eEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEECCCCce
Confidence 886 544455422 346899999999988776532 477899887664
No 200
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.61 E-value=3e-06 Score=85.23 Aligned_cols=228 Identities=11% Similarity=0.022 Sum_probs=137.8
Q ss_pred CCCCceeeeChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCC
Q 018235 44 LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVP 123 (359)
Q Consensus 44 ~~~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~ 123 (359)
+..++++.+|+....-=+.+ .--++.|-||+ .+|+.+....+.+...|+|+++..
T Consensus 110 ~~~~~~vllD~n~la~~~~~----~l~~~~~SpDg-----------~~lAy~~~~~G~~~~~i~v~dl~t---------- 164 (693)
T 3iuj_A 110 EGKPAEVFLDPNTLSPDGTT----ALDQLSFSRDG-----------RILAYSLSLAGSDWREIHLMDVES---------- 164 (693)
T ss_dssp TTSCCEEEECGGGGSTTSCC----EEEEEEECTTS-----------SEEEEEEECSSCCEEEEEEEETTT----------
T ss_pred CCCCcEEEEehhhccCCCcE----EEEEEEECCCC-----------CEEEEEEecCCCceEEEEEEECCC----------
Confidence 45677888888766443433 23356788986 467777766666667888888730
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCC-------------CcE
Q 018235 124 NKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADT-------------GHV 190 (359)
Q Consensus 124 ~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~d-------------g~V 190 (359)
...+..... ......++|+ ++..++. ++.+ ..|
T Consensus 165 ------------------------------g~~~~~~~~--~~k~~~~~Ws-Dg~~l~y-~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 165 ------------------------------KQPLETPLK--DVKFSGISWL-GNEGFFY-SSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp ------------------------------CSEEEEEEE--EEESCCCEEE-TTTEEEE-EESSCCC-------CCCCEE
T ss_pred ------------------------------CCCCccccC--CceeccEEEe-CCCEEEE-EEecCcccccccccCCCcEE
Confidence 111111111 1113567899 8854444 4444 348
Q ss_pred EEEECCCCccccccccccccCCCCCCCCCCCcEEec--C-CCCceEEEEeCCCCCCeEEEEcC---CCcEEEEecCCCCc
Q 018235 191 QVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--G-HKDEGYAIDWNPITTGRLVTGDC---NSCIYLWEPASDAT 264 (359)
Q Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-h~~~v~~l~~sp~~~~~l~sgs~---dg~I~lwd~~~~~~ 264 (359)
++|++.... ......+. . |.....++.|+|+++.++++.+. .+.|+++|+..+..
T Consensus 211 ~~~~lgt~~-------------------~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 211 YFHRLGTAQ-------------------EDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp EEEETTSCG-------------------GGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred EEEECCCCc-------------------ccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 999987621 12223333 2 34457789999999844444432 35799999876432
Q ss_pred ceecCccccCCCCCeEEEEecCCCCCEEEEEeCC---CcEEEEECCCCCC-ceEEeecCCCCEEEEEEcCCCCeEEEEee
Q 018235 265 WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD---GHIAIWDTRVGKS-ALTSFKAHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 265 ~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D---g~I~iwD~r~~~~-~~~~~~~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
.. ..+..+....... |++.+..+++....+ +.|.++|+.++.. ....+..|...+. .|++++..|++...
T Consensus 272 ~~---~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 272 PL---LTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp CC---EEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE
T ss_pred ce---EEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE
Confidence 22 3455666666555 667776466665543 6799999987621 1345666666665 89999998887765
Q ss_pred ecccceEEEEEeCcCC
Q 018235 341 VMMEHFLFMILDCSRG 356 (359)
Q Consensus 341 ~~~~d~~i~iwd~~~g 356 (359)
... ...|.+|+...+
T Consensus 346 ~~g-~~~l~~~d~~g~ 360 (693)
T 3iuj_A 346 VDA-TARVEQFDYEGK 360 (693)
T ss_dssp ETT-EEEEEEECTTSC
T ss_pred ECC-eeEEEEEECCCC
Confidence 311 235788877644
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.61 E-value=2.5e-06 Score=76.21 Aligned_cols=161 Identities=6% Similarity=0.026 Sum_probs=106.3
Q ss_pred CceeeEEEeCCCCcEEEEEeCC---------------CcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADT---------------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD 230 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~d---------------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 230 (359)
..++.+.+.+++ .++++...+ +.|..|+... .. ..+..+..
T Consensus 117 ~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g----------------------~~-~~~~~~~~ 172 (314)
T 1pjx_A 117 QGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG----------------------QM-IQVDTAFQ 172 (314)
T ss_dssp BCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS----------------------CE-EEEEEEES
T ss_pred cCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCCC----------------------CE-EEeccCCC
Confidence 357899999998 666665544 4555555432 11 11222233
Q ss_pred ceEEEEeC----CCCCCeEEEEcCCCcEEEEecCCCCccee--cCccccCCC-CCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 231 EGYAIDWN----PITTGRLVTGDCNSCIYLWEPASDATWNV--DPNPFIGHS-ASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 231 ~v~~l~~s----p~~~~~l~sgs~dg~I~lwd~~~~~~~~~--~~~~~~~h~-~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
...+++|+ |++..++++...++.|.+|++...+.... ....+.++. ..+..+++++++. ++++...++.|.+
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEV 251 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEE
Confidence 46789999 98863456666788999999762232110 012233444 5688999999997 8888888899999
Q ss_pred EECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 304 WDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
||..++ ..+..+..+...+.+++|++++..|..+... ++.|..|+...
T Consensus 252 ~d~~~g-~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~~ 299 (314)
T 1pjx_A 252 FGPDGG-QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQR 299 (314)
T ss_dssp ECTTCB-SCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECSS
T ss_pred EcCCCC-cEeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeCCC
Confidence 999865 4555666666789999999999855544331 45677787654
No 202
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.57 E-value=2.3e-06 Score=78.97 Aligned_cols=90 Identities=7% Similarity=0.103 Sum_probs=66.2
Q ss_pred EEeCCCCCCeEEEEcC-----------CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 235 IDWNPITTGRLVTGDC-----------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 235 l~~sp~~~~~l~sgs~-----------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
++++|++. +++.+.. .+.|.+||+.+ .+.+ ..+..+. +.+++|+|+++ +|++++. ++|.+
T Consensus 259 ~a~~~dg~-~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v---~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v 329 (361)
T 2oiz_A 259 VGLHRASG-RMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRV---ARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNV 329 (361)
T ss_dssp EEEETTTT-EEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEE---EEEECTT--CCEEEEETTTT-EEEEECS-SCEEE
T ss_pred EEEecCCC-eEEEEEccCCCcccccCCCceEEEEECCC-CcEE---EEEecCC--eeEEEECCCCC-EEEEeCC-CeEEE
Confidence 67888876 5444321 34799999987 4443 4555555 99999999999 7766666 99999
Q ss_pred EECCCCC-CceEEeecCCCCEEEEEEcCCCC
Q 018235 304 WDTRVGK-SALTSFKAHNADVNVISWNRCWL 333 (359)
Q Consensus 304 wD~r~~~-~~~~~~~~h~~~V~~i~~s~~~~ 333 (359)
||..++. +.+.++..+....+.+.++|+|.
T Consensus 330 ~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 330 YDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999851 34445556777889999999985
No 203
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.56 E-value=9.2e-07 Score=88.97 Aligned_cols=168 Identities=8% Similarity=0.023 Sum_probs=104.7
Q ss_pred CCCceeeEEEeCCCCcEEEEEeC----CCcEEEEECCCCccccccccccccCCCCCCCCCCCcE-EecCCCCceEEEEeC
Q 018235 164 HQGCVNRIRAMTQNPHICASWAD----TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV-KFGGHKDEGYAIDWN 238 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~----dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~s 238 (359)
|...+..++|+|++..++.+.+. ...|++||+.+ ++.+. .+.+. ...+++|+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t---------------------g~~~~~~~~~~--k~~~~~Ws 183 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES---------------------KQPLETPLKDV--KFSGISWL 183 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT---------------------CSEEEEEEEEE--ESCCCEEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC---------------------CCCCccccCCc--eeccEEEe
Confidence 55678889999999544444433 35799999987 23222 12111 12478999
Q ss_pred CCCCCeEEEEcCCC-------------cEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeC---CCcE
Q 018235 239 PITTGRLVTGDCNS-------------CIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSV---DGHI 301 (359)
Q Consensus 239 p~~~~~l~sgs~dg-------------~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~---Dg~I 301 (359)
++. .|+.++.+. .|++|++.+...-...+..... |...+..+.|+|++..++++.+. ...|
T Consensus 184 -Dg~-~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 261 (693)
T 3iuj_A 184 -GNE-GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRL 261 (693)
T ss_dssp -TTT-EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEE
T ss_pred -CCC-EEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEE
Confidence 998 666665553 3999998763221100112223 44557889999999966566553 3579
Q ss_pred EEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 302 AIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 302 ~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+++|+.++......+..+....... |++++..+++..........|..++..++.
T Consensus 262 ~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 262 YVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp EEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred EEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 9999987633566666666655554 667777666554432334678888877654
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.49 E-value=8.8e-06 Score=72.96 Aligned_cols=164 Identities=5% Similarity=-0.097 Sum_probs=107.0
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
..+........|.|++..++++...++.|..|+... . ...+..+...+.++.|++++
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----------------------~-~~~~~~~~~~~~gl~~d~dG 97 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----------------------T-VDVLLDATAFTNGNAVDAQQ 97 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----------------------C-EEEEEESCSCEEEEEECTTS
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----------------------C-EEEEeCCCCccceeeECCCC
Confidence 345566788999999966888888999999998743 1 23444455678899999998
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEE----EeC-------------CCcEEE
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFAS----CSV-------------DGHIAI 303 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las----~s~-------------Dg~I~i 303 (359)
. ++++...++.|.+|+.. ++.........+ ....++++.++|++. +++| |.. .+.|..
T Consensus 98 ~-l~v~~~~~~~v~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 98 R-LVHCEHGRRAITRSDAD--GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp C-EEEEETTTTEEEEECTT--SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred C-EEEEECCCCEEEEECCC--CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEE
Confidence 7 66666666889999975 332210111111 124578899999998 7776 321 256777
Q ss_pred EECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeec--ccceEEEEEeCcC
Q 018235 304 WDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVM--MEHFLFMILDCSR 355 (359)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~--~~d~~i~iwd~~~ 355 (359)
||..++ .. ..+. .....+.++|+|++..|.+..... .....|.+|+...
T Consensus 174 ~d~~~g-~~-~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 174 LPPDGS-PL-QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp ECSSSC-CC-EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred EcCCCC-cE-EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 777655 22 2222 344578999999999776654310 0024677777543
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.49 E-value=2.2e-05 Score=69.22 Aligned_cols=157 Identities=5% Similarity=-0.046 Sum_probs=108.0
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
.....+.++.+.+++ .++++...++.|.+|+..... . ...+..+...+.+|.+.+++.
T Consensus 17 ~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~--------------------~-~~~~~~~~~~~~~i~~~~~g~ 74 (300)
T 2qc5_A 17 IPDSGPYGITSSEDG-KVWFTQHKANKISSLDQSGRI--------------------K-EFEVPTPDAKVMCLIVSSLGD 74 (300)
T ss_dssp STTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSCE--------------------E-EEECSSTTCCEEEEEECTTSC
T ss_pred CCCCCcceeeECCCC-CEEEEcCCCCeEEEECCCCce--------------------E-EEECCCCCCcceeEEECCCCC
Confidence 345688999999998 677777778999999876310 0 112223345788999999887
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce-EEeecCCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL-TSFKAHNA 321 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~-~~~~~h~~ 321 (359)
++++...++.|..||.. +.... ..+......+.++++.+++. ++++...++.|..+|.. + ... ..+.....
T Consensus 75 -l~v~~~~~~~v~~~d~~--g~~~~--~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g-~~~~~~~~~~~~ 146 (300)
T 2qc5_A 75 -IWFTENGANKIGKLSKK--GGFTE--YPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-G-TIYEYDLPNKGS 146 (300)
T ss_dssp -EEEEETTTTEEEEECTT--SCEEE--EECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-S-CEEEEECSSTTC
T ss_pred -EEEEecCCCeEEEECCC--CCeEE--ecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-C-CEEEccCCCCCC
Confidence 77777668899999976 33221 12222346789999999987 88887778899999987 4 322 22333456
Q ss_pred CEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 322 DVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 322 ~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
.++.+++.+++.+.+.... .+.|..++.
T Consensus 147 ~~~~i~~d~~g~l~v~~~~----~~~i~~~~~ 174 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ----NNSIGRITN 174 (300)
T ss_dssp CEEEEEECTTSSEEEEETT----TTEEEEECT
T ss_pred CceeEEECCCCCEEEEecC----CCeEEEECC
Confidence 7899999999986555432 345666665
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.49 E-value=6.1e-06 Score=73.79 Aligned_cols=151 Identities=9% Similarity=0.104 Sum_probs=100.1
Q ss_pred CceeeEEEeCCCCcEEEE-EeC--------CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEE
Q 018235 166 GCVNRIRAMTQNPHICAS-WAD--------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat-~s~--------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (359)
..++.+++.|++ .++++ ... .....||.+... .. +..+..+.....+++
T Consensus 98 ~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--------------------g~-~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 98 NRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPD--------------------HH-VKKYFDQVDISNGLD 155 (297)
T ss_dssp EEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTT--------------------SC-EEEEEEEESBEEEEE
T ss_pred CCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECC--------------------CC-EEEEeeccccccceE
Confidence 457899999999 45554 332 133455655431 11 122222333567999
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecC-CCCccee--cCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPA-SDATWNV--DPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~-~~~~~~~--~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
|+|++..++++.+.++.|.+|++. ..+.... ....+..+......+++++++. ++++....+.|.+||..++ +.+
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG-~~~ 233 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTG-KRL 233 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTC-CEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCc-eEE
Confidence 999998455677778899999874 2233210 0112222345678899999997 8888888899999999876 667
Q ss_pred EEeecCCCCEEEEEEc-CCCCeEEEEee
Q 018235 314 TSFKAHNADVNVISWN-RCWLAVCWHLE 340 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s-~~~~~l~~~~~ 340 (359)
..+..+...+++++|. |++..|..+..
T Consensus 234 ~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 QTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 7777676789999998 78776665544
No 207
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.48 E-value=3.1e-05 Score=70.29 Aligned_cols=157 Identities=7% Similarity=-0.050 Sum_probs=98.3
Q ss_pred ceeeEEEeCCCCcEEEEEe-CCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 167 CVNRIRAMTQNPHICASWA-DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s-~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
....+.+ ..+ .++++.. .++.|.+||+.. .+.+..+... ....++.++|++. ++
T Consensus 132 ~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t---------------------~~~~~~i~~g-~~p~~i~~~~dG~-l~ 186 (328)
T 3dsm_A 132 STEQMVQ-YGK-YVYVNCWSYQNRILKIDTET---------------------DKVVDELTIG-IQPTSLVMDKYNK-MW 186 (328)
T ss_dssp BCCCEEE-ETT-EEEEEECTTCCEEEEEETTT---------------------TEEEEEEECS-SCBCCCEECTTSE-EE
T ss_pred CcceEEE-ECC-EEEEEcCCCCCEEEEEECCC---------------------CeEEEEEEcC-CCccceEEcCCCC-EE
Confidence 4556677 334 5666654 588999999986 2333333321 2345788899887 66
Q ss_pred EEEcCC----------CcEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce-
Q 018235 246 VTGDCN----------SCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL- 313 (359)
Q Consensus 246 ~sgs~d----------g~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~- 313 (359)
+++..+ +.|.++|..+ ++.. ..+.. .......++|+|++. .+..+.. .|.+||+.++ +..
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~---~~~~~~~g~~p~~la~~~d~~-~lyv~~~--~v~~~d~~t~-~~~~ 258 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAET-FTVE---KQFKFKLGDWPSEVQLNGTRD-TLYWINN--DIWRMPVEAD-RVPV 258 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTT-TEEE---EEEECCTTCCCEEEEECTTSC-EEEEESS--SEEEEETTCS-SCCS
T ss_pred EEECCCccCCccccCCceEEEEECCC-CeEE---EEEecCCCCCceeEEEecCCC-EEEEEcc--EEEEEECCCC-ceee
Confidence 666554 7899999876 4432 22221 124688999999988 4544433 8999999876 322
Q ss_pred EE-eecCCCCEEEEEEcCCCCeEEEEe-eecccceEEEEEeCcCCc
Q 018235 314 TS-FKAHNADVNVISWNRCWLAVCWHL-EVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 314 ~~-~~~h~~~V~~i~~s~~~~~l~~~~-~~~~~d~~i~iwd~~~g~ 357 (359)
.. +..+......|+++|++..+..+. .....++.|.+|+.. |+
T Consensus 259 ~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 259 RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 11 222245689999999544444433 101126789999987 55
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.47 E-value=3.3e-05 Score=68.09 Aligned_cols=156 Identities=7% Similarity=-0.096 Sum_probs=106.9
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
+...+..+.+.+++ .++++...++.|..||.... .....+......+.++++.+++.
T Consensus 60 ~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~g~---------------------~~~~~~~~~~~~~~~i~~~~~g~- 116 (300)
T 2qc5_A 60 PDAKVMCLIVSSLG-DIWFTENGANKIGKLSKKGG---------------------FTEYPLPQPDSGPYGITEGLNGD- 116 (300)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSC---------------------EEEEECSSTTCCEEEEEECSTTC-
T ss_pred CCCcceeEEECCCC-CEEEEecCCCeEEEECCCCC---------------------eEEecCCCCCCCCccceECCCCC-
Confidence 34678899999988 67777677788999987631 11112222335688999999887
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceE-EeecCCCC
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT-SFKAHNAD 322 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~-~~~~h~~~ 322 (359)
++++...++.|..|+.. +.... ..+......+.++++.+++. ++++...++.|..+|. .+ .... .+..+...
T Consensus 117 l~v~~~~~~~i~~~~~~--g~~~~--~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g-~~~~~~~~~~~~~ 189 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD--GTIYE--YDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TG-KLEEYPLPTNAAA 189 (300)
T ss_dssp EEEEETTTTEEEEECTT--SCEEE--EECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TC-CEEEEECSSTTCC
T ss_pred EEEEccCCCeEEEECCC--CCEEE--ccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CC-cEEEeeCCCCCCC
Confidence 77777768899999985 33221 12233456789999999998 8888877889999998 43 2222 22334557
Q ss_pred EEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 323 VNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 323 V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
+..|++.+++.+.+.... .+.|.+++.
T Consensus 190 ~~~i~~d~~g~l~v~~~~----~~~i~~~~~ 216 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIM----GNKIGRITT 216 (300)
T ss_dssp EEEEEECTTSSEEEEETT----TTEEEEECT
T ss_pred cceEEECCCCCEEEEccC----CCEEEEEcC
Confidence 899999999876665533 445777776
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.45 E-value=3.2e-05 Score=69.05 Aligned_cols=158 Identities=9% Similarity=0.001 Sum_probs=100.5
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
+..--.+..|+|.+..++++....+.|+.||... .. ...+. ....+.++++++++.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~---------------------~~-~~~~~-~~~~~~~i~~~~dG~- 66 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFT---------------------KQ-VQRVT-MDAPVSSVALRQSGG- 66 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTT---------------------CC-EEEEE-CSSCEEEEEEBTTSS-
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCC---------------------Cc-EEEEe-CCCceEEEEECCCCC-
Confidence 3445668899997657888888899999999876 12 22232 345788999999987
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeC---------CCcEEEEECCCCCCce
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSV---------DGHIAIWDTRVGKSAL 313 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~---------Dg~I~iwD~r~~~~~~ 313 (359)
++++. ++.|.+||..+ +..........+ ....++++.++|++. ++++... .....||.+... ..+
T Consensus 67 l~v~~--~~~l~~~d~~~-g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~ 141 (297)
T 3g4e_A 67 YVATI--GTKFCALNWKE-QSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-HHV 141 (297)
T ss_dssp EEEEE--TTEEEEEETTT-TEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-SCE
T ss_pred EEEEE--CCeEEEEECCC-CcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC-CCE
Confidence 55543 56899999876 332210011111 124589999999998 6665432 133455555433 223
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
..+..+-...+.++|+|+++.+.+.... .+.|.+|+.
T Consensus 142 ~~~~~~~~~pngi~~spdg~~lyv~~~~---~~~i~~~~~ 178 (297)
T 3g4e_A 142 KKYFDQVDISNGLDWSLDHKIFYYIDSL---SYSVDAFDY 178 (297)
T ss_dssp EEEEEEESBEEEEEECTTSCEEEEEEGG---GTEEEEEEE
T ss_pred EEEeeccccccceEEcCCCCEEEEecCC---CCcEEEEec
Confidence 3333344457899999999977665432 556777764
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.44 E-value=0.00011 Score=68.17 Aligned_cols=171 Identities=11% Similarity=0.066 Sum_probs=99.5
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
+...++ +.+.|.++..+++.+.||.+.+++. ..... ... ...+. +.+...-.....+.+++
T Consensus 164 i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~-~~~------------~~~~~--~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 164 LSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA-GAG------------LVGAM--LTAAQNLLTQPAQANKS 224 (373)
T ss_pred cCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEE-EEE------------ecccc--ccCCcceeecceeEecC
Confidence 444444 4566777677788889999999999 51100 000 00011 11111111234556665
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccC----------CCCCeEEEEecCCCCCEEEEEe---------CCCcEE
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG----------HSASVEDLQWSPTEPDVFASCS---------VDGHIA 302 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~----------h~~~V~~v~~sp~~~~~las~s---------~Dg~I~ 302 (359)
..+++. +..+.+.+.|+........ ..+.- .......+.++|++..++++.. ..+.|.
T Consensus 225 ~~~~~~-~~~~~v~vid~~~~~~~v~--~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 225 GRIVWP-VYSGKILQADISAAGATNK--APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred CEEEEE-cCCceEEEEeccCCcceEe--eeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 533444 3678899988865221111 11110 1233445788999885666543 235799
Q ss_pred EEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 303 IWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 303 iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
++|+.+. +.+.++. .....+++.|+|+|+.+++... ..++.|.++|..++++
T Consensus 302 VID~~t~-~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~--~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 302 SVTGLVG-QTSSQIS-LGHDVDAISVAQDGGPDLYALS--AGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEECCCC-EEEEEEE-CCCCcCeEEECCCCCeEEEEEc--CCCCeEEEEECCCCCE
Confidence 9999987 6666774 3335889999999994444432 1267899999998875
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.40 E-value=2e-05 Score=71.44 Aligned_cols=152 Identities=11% Similarity=-0.017 Sum_probs=97.8
Q ss_pred ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEE
Q 018235 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 246 (359)
-....+|+|++..++++...++.|..||... .. ...+. ....+.++.|++++. +++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~---------------------~~-~~~~~-~~~~v~~i~~~~dg~-l~v 105 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLAS---------------------GR-KTVHA-LPFMGSALAKISDSK-QLI 105 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTT---------------------TE-EEEEE-CSSCEEEEEEEETTE-EEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCC---------------------Cc-EEEEE-CCCcceEEEEeCCCe-EEE
Confidence 3467889998657888888889999999876 11 12222 234788999999986 555
Q ss_pred EEcCCCcEEEEecCCCCcceecCcccc-C-CCCCeEEEEecCCCCCEEEEEeC------CCcEEEEECCCCCCceEEeec
Q 018235 247 TGDCNSCIYLWEPASDATWNVDPNPFI-G-HSASVEDLQWSPTEPDVFASCSV------DGHIAIWDTRVGKSALTSFKA 318 (359)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~las~s~------Dg~I~iwD~r~~~~~~~~~~~ 318 (359)
+. .+ .|.+||..+ +.... ..... + ....++++.++|++. ++++... .+.|..++ .+ .+..+..
T Consensus 106 ~~-~~-gl~~~d~~~-g~~~~-~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g--~~~~~~~ 176 (326)
T 2ghs_A 106 AS-DD-GLFLRDTAT-GVLTL-HAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KG--KVTKLFA 176 (326)
T ss_dssp EE-TT-EEEEEETTT-CCEEE-EECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TT--EEEEEEE
T ss_pred EE-CC-CEEEEECCC-CcEEE-EeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CC--cEEEeeC
Confidence 54 34 499999866 33221 01111 1 124689999999998 6665442 24555555 33 3333333
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 319 HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 319 h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+....+.++|+|+++.+.+.... .+.|.+|+..
T Consensus 177 ~~~~~~~i~~s~dg~~lyv~~~~---~~~I~~~d~~ 209 (326)
T 2ghs_A 177 DISIPNSICFSPDGTTGYFVDTK---VNRLMRVPLD 209 (326)
T ss_dssp EESSEEEEEECTTSCEEEEEETT---TCEEEEEEBC
T ss_pred CCcccCCeEEcCCCCEEEEEECC---CCEEEEEEcc
Confidence 34457899999999877665432 5678888864
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.38 E-value=0.00021 Score=64.63 Aligned_cols=147 Identities=8% Similarity=-0.002 Sum_probs=94.3
Q ss_pred CceeeEEEeCCCCcEEEEEeC------CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC
Q 018235 166 GCVNRIRAMTQNPHICASWAD------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 239 (359)
..++.+++.|++ .++++... .+.|..++ .. .. ..+..+.....+++|+|
T Consensus 134 ~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~-~g----------------------~~-~~~~~~~~~~~~i~~s~ 188 (326)
T 2ghs_A 134 NRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA-KG----------------------KV-TKLFADISIPNSICFSP 188 (326)
T ss_dssp EEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE-TT----------------------EE-EEEEEEESSEEEEEECT
T ss_pred CCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe-CC----------------------cE-EEeeCCCcccCCeEEcC
Confidence 368899999999 45554332 24555555 22 11 11112223467899999
Q ss_pred CCCCeEEEEcCCCcEEEEecC-CCC-ccee--cCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 240 ITTGRLVTGDCNSCIYLWEPA-SDA-TWNV--DPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~-~~~-~~~~--~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
++..++++.+.++.|.+|++. ..+ .... ....+......+..+++++++. ++++...++.|.+||.. + ..+..
T Consensus 189 dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~-g-~~~~~ 265 (326)
T 2ghs_A 189 DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTD-G-NHIAR 265 (326)
T ss_dssp TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTT-C-CEEEE
T ss_pred CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCC-C-CEEEE
Confidence 997344566667899999986 123 2110 0011222345678899999997 88877777899999984 4 55666
Q ss_pred eecCCCCEEEEEEc-CCCCeEEEEee
Q 018235 316 FKAHNADVNVISWN-RCWLAVCWHLE 340 (359)
Q Consensus 316 ~~~h~~~V~~i~~s-~~~~~l~~~~~ 340 (359)
+..+...+.+++|. +++..|.....
T Consensus 266 i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 266 YEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EECCCCCcEEEEEecCCCCEEEEEec
Confidence 66666679999998 88776655543
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.29 E-value=1.9e-07 Score=86.60 Aligned_cols=152 Identities=12% Similarity=0.070 Sum_probs=71.9
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC---CCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP---ITT 242 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp---~~~ 242 (359)
+.+.+..+..++ .++++++.+|.|+.||... ++.+..+..+..... ..+| .+
T Consensus 38 ~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~t---------------------G~~~w~~~~~~~~~~--~~sp~~~~~- 92 (369)
T 2hz6_A 38 DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKN---------------------NEGLTKLPFTIPELV--QASPCRSSD- 92 (369)
T ss_dssp CCSCCCC------CCEEECTTTCCEEEC--------------------------CCSEECSCCHHHHH--TTCSCC----
T ss_pred CCceecceEcCC-CEEEEeCCCCEEEEEECCC---------------------CceeeeeeccCcccc--ccCceEecC-
Confidence 455555555555 5777778999999999876 333333333211000 0011 22
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (359)
+.|++|+.++.|+.||..+ ++.. ..+..+. .+.++|.+. .+++++.|+.|+.||.+++ +.+..+..+.
T Consensus 93 ~~v~~g~~dg~v~a~D~~t-G~~~---w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG-~~~W~~~~~~-- 160 (369)
T 2hz6_A 93 GILYMGKKQDIWYVIDLLT-GEKQ---QTLSSAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTR-ELRWNATYFD-- 160 (369)
T ss_dssp --CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSS-SCCCEEEEEE--
T ss_pred CEEEEEeCCCEEEEEECCC-CcEE---EEecCCC----cccccccCC-EEEEEecCCEEEEEECCCC-CEEEeEeccc--
Confidence 3677888899999999987 4432 2233332 245667666 7888899999999999988 5554443211
Q ss_pred EEEEEEcCCC---CeEEEEeeecccceEEEEEeCcCCcc
Q 018235 323 VNVISWNRCW---LAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 323 V~~i~~s~~~---~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.....+..+. ..++.+.. ++.+..||..+|++
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~----dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNG----DGLVVTVDSESGDV 195 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEET----SCEEEEECTTTCCE
T ss_pred ccCccccCCccccceEEEECC----CCEEEEEECCCCcE
Confidence 1122233321 33344433 67788888877764
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.28 E-value=3.4e-05 Score=68.75 Aligned_cols=158 Identities=9% Similarity=-0.007 Sum_probs=99.2
Q ss_pred cCCCceeeEEEeCCCCcEEEE-------EeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-----CCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICAS-------WADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-----GHKD 230 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat-------~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~ 230 (359)
..-....+++|.+++ .++++ ...++.|.+||... .+. ..+. ++..
T Consensus 15 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~---------------------g~~-~~~~~~~~~~~~~ 71 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKT---------------------GKK-TVICKPEVNGYGG 71 (314)
T ss_dssp CCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTT---------------------CCE-EEEECCEETTEEC
T ss_pred ccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCC---------------------CcE-EEEEecccCCCCC
Confidence 344567889999888 67776 56678999999765 121 1121 2445
Q ss_pred ceEEEEeCCC-CCCeEEEEcCCCcEEEEecCCCCcceec-CccccC-CCCCeEEEEecCCCCCEEEEEeCC---------
Q 018235 231 EGYAIDWNPI-TTGRLVTGDCNSCIYLWEPASDATWNVD-PNPFIG-HSASVEDLQWSPTEPDVFASCSVD--------- 298 (359)
Q Consensus 231 ~v~~l~~sp~-~~~~l~sgs~dg~I~lwd~~~~~~~~~~-~~~~~~-h~~~V~~v~~sp~~~~~las~s~D--------- 298 (359)
.+.++.++++ +. ++++.. .+.|.+|+.. ++.... .....+ ....+.+++++|++. ++++...+
T Consensus 72 ~~~~i~~~~~~g~-l~v~~~-~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 72 IPAGCQCDRDANQ-LFVADM-RLGLLVVQTD--GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTR 146 (314)
T ss_dssp CEEEEEECSSSSE-EEEEET-TTEEEEEETT--SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCB
T ss_pred CCceEEEecCCCc-EEEEEC-CCCEEEEeCC--CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccc
Confidence 6889999998 64 455444 4578899986 332211 011111 224588999999997 77776655
Q ss_pred ------CcEEEEECCCCCCceEEeecCCCCEEEEEEc----CCCCeEEEEeeecccceEEEEEeCc
Q 018235 299 ------GHIAIWDTRVGKSALTSFKAHNADVNVISWN----RCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 299 ------g~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s----~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+.|..||.. + .. ..+..+....+.++|+ +++..+.+.... .+.|.+|+..
T Consensus 147 ~~~~~~~~l~~~~~~-g-~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~~ 206 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-G-QM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDIK 206 (314)
T ss_dssp TTSSSCEEEEEECTT-S-CE-EEEEEEESSEEEEEEEECTTSCEEEEEEEETT---TTEEEEEEEE
T ss_pred cccCCCCeEEEECCC-C-CE-EEeccCCCCcceEEEecccCCCCCEEEEEECC---CCeEEEEECC
Confidence 567777765 3 32 3333344457899999 998765554321 4567777754
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.28 E-value=3.4e-05 Score=72.42 Aligned_cols=157 Identities=10% Similarity=0.018 Sum_probs=99.2
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.....+++.+++ .++++...++.|++||... .. +..+........ ++|++++. .|
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~---------------------g~-~~~~~~~~~~~~-ia~~~~g~-~l 185 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDD---------------------NK-VTTVHPGFKGGK-PAVTKDKQ-RV 185 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTT---------------------TE-EEEEEETCCBCB-CEECTTSS-EE
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCC---------------------CE-EEEeeccCCCCc-eeEecCCC-cE
Confidence 356789999988 6888888889999999875 12 222222233344 99999998 78
Q ss_pred EEEcCCC--cEEEEecCCCCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe-----e
Q 018235 246 VTGDCNS--CIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF-----K 317 (359)
Q Consensus 246 ~sgs~dg--~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~-----~ 317 (359)
++++.++ .|.+|+......... ...+.. ....+.+++++|.+..+++ +..++.|+.||..++ . ...+ .
T Consensus 186 ~~~d~~~~~~I~~~d~~~~~~~~~-~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~-~-~~~~~~~~~~ 261 (409)
T 3hrp_A 186 YSIGWEGTHTVYVYMKASGWAPTR-IGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQ-E-VTLIKQLELS 261 (409)
T ss_dssp EEEBSSTTCEEEEEEGGGTTCEEE-EEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTC-C-EEEEEECCCC
T ss_pred EEEecCCCceEEEEEcCCCceeEE-eeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCC-C-EEEEeccccc
Confidence 8887766 788888765322110 001112 4456788999995442555 677889999999876 2 2222 1
Q ss_pred cCCCCE--EEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 318 AHNADV--NVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 318 ~h~~~V--~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.+...- +.|+|+|++..|.+.... .+.|..|+..
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~---~~~I~~~~~~ 297 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQN---LSSVYKITPD 297 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETT---TTEEEEECTT
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCC---CCEEEEEecC
Confidence 122212 389999965444444321 5677777754
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.21 E-value=3.4e-07 Score=84.99 Aligned_cols=142 Identities=9% Similarity=0.035 Sum_probs=71.8
Q ss_pred cEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEe
Q 018235 179 HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE 258 (359)
Q Consensus 179 ~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd 258 (359)
..+++++.+|.|+.||..+ ++.+..+.. ..+.+..+...+. .+++++.||.|+.||
T Consensus 10 ~~v~~gs~dg~v~a~d~~t---------------------G~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d 65 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRT---------------------GSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLG 65 (369)
T ss_dssp TEEEEEETTSEEEEEETTT---------------------CCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-
T ss_pred CEEEEEcCCCEEEEEECCC---------------------CCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEE
Confidence 5788889999999999887 566666654 3444444455565 788888999999999
Q ss_pred cCCCCc-ceecCccc-cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEE
Q 018235 259 PASDAT-WNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336 (359)
Q Consensus 259 ~~~~~~-~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~ 336 (359)
..++.. |......- .....++ .. .+. .+++++.++.|+.||.+++ +.+..+..+.. +.++|.+..++
T Consensus 66 ~~tG~~~w~~~~~~~~~~~~sp~----~~-~~~-~v~~g~~dg~v~a~D~~tG-~~~w~~~~~~~----~~~~p~~~~v~ 134 (369)
T 2hz6_A 66 SKNNEGLTKLPFTIPELVQASPC----RS-SDG-ILYMGKKQDIWYVIDLLTG-EKQQTLSSAFA----DSLSPSTSLLY 134 (369)
T ss_dssp ----CCSEECSCCHHHHHTTCSC----C-------CCCCEEEEEEEEECCC---------------------------EE
T ss_pred CCCCceeeeeeccCccccccCce----Ee-cCC-EEEEEeCCCEEEEEECCCC-cEEEEecCCCc----ccccccCCEEE
Confidence 976432 22100000 0011111 11 233 6777888999999999998 66666654432 34566777777
Q ss_pred EEeeecccceEEEEEeCcCCccC
Q 018235 337 WHLEVMMEHFLFMILDCSRGEIR 359 (359)
Q Consensus 337 ~~~~~~~~d~~i~iwd~~~g~v~ 359 (359)
.+.. ++.|..||..+|+++
T Consensus 135 ~~~~----dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 135 LGRT----EYTITMYDTKTRELR 153 (369)
T ss_dssp EEEE----EEEEECCCSSSSSCC
T ss_pred EEec----CCEEEEEECCCCCEE
Confidence 6654 778999999988753
No 217
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.11 E-value=0.00076 Score=58.81 Aligned_cols=160 Identities=8% Similarity=-0.030 Sum_probs=103.3
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
..+..+.+.+.+..++++-...+.|..+++.. ......+........+|++++.+..++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g---------------------~~~~~~~~~~~~~p~~ia~d~~~~~ly 94 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHG---------------------GEPTTIIRQDLGSPEGIALDHLGRTIF 94 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSS---------------------CCCEEEECTTCCCEEEEEEETTTTEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCC---------------------CCcEEEEECCCCCccEEEEEecCCeEE
Confidence 35778999997657888877889999999875 122222222224567899998765355
Q ss_pred EEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeC--CCcEEEEECCCCCCceEEe-ecCCCC
Q 018235 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV--DGHIAIWDTRVGKSALTSF-KAHNAD 322 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~--Dg~I~iwD~r~~~~~~~~~-~~h~~~ 322 (359)
++-...+.|.++++.. .... ............++++|.+..++++... .+.|..+++... ....+ ...-..
T Consensus 95 v~d~~~~~I~~~~~~g-~~~~---~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~--~~~~~~~~~~~~ 168 (267)
T 1npe_A 95 WTDSQLDRIEVAKMDG-TQRR---VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT--NRRILAQDNLGL 168 (267)
T ss_dssp EEETTTTEEEEEETTS-CSCE---EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC--CCEEEECTTCSC
T ss_pred EEECCCCEEEEEEcCC-CCEE---EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC--CcEEEEECCCCC
Confidence 6666678999999864 2211 1111122467899999976646666554 478888887653 22222 222345
Q ss_pred EEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 323 VNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 323 V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
.+.|++++++..|.+.... .+.|..++...
T Consensus 169 P~gia~d~~~~~lyv~d~~---~~~I~~~~~~g 198 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAG---THRAECLNPAQ 198 (267)
T ss_dssp EEEEEEETTTTEEEEEETT---TTEEEEEETTE
T ss_pred CcEEEEcCCCCEEEEEECC---CCEEEEEecCC
Confidence 7899999988877776542 45677777643
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.06 E-value=7.3e-05 Score=68.20 Aligned_cols=164 Identities=7% Similarity=-0.055 Sum_probs=99.3
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeC-----CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec------CCCCc
Q 018235 163 AHQGCVNRIRAMTQNPHICASWAD-----TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG------GHKDE 231 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~-----dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~ 231 (359)
.|-..+.++++.+++ .++++-.. .+.|.+||+... +.+..+. .+...
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg---------------------~~~~~~~~~~~~~~~~~~ 121 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNN---------------------QLSRVIYLPPPITLSNSF 121 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTT---------------------EEEEEEECCTTTSCTTCC
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCC---------------------eEEEEEECChhhcccccc
Confidence 456789999999998 66665433 578999998751 2222221 12234
Q ss_pred eEEEEeCCCCCCeEEEEc---CCCcEEEEecCCCCcceecCccccCC-----------------------------CCCe
Q 018235 232 GYAIDWNPITTGRLVTGD---CNSCIYLWEPASDATWNVDPNPFIGH-----------------------------SASV 279 (359)
Q Consensus 232 v~~l~~sp~~~~~l~sgs---~dg~I~lwd~~~~~~~~~~~~~~~~h-----------------------------~~~V 279 (359)
...+++++.+...+++.. .++.|.+||+.++..+. .+.+| ...+
T Consensus 122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r----~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~ 197 (343)
T 2qe8_A 122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR----VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGV 197 (343)
T ss_dssp CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE----ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCE
T ss_pred cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE----EecCCCcccccccceeECCEEEEeccCCCceeceeccc
Confidence 578999876542456555 57899999987632221 11111 1246
Q ss_pred EEEEecCCCCCEEEEEeCCC-cEEEEECC---CCC----Cce--EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEE
Q 018235 280 EDLQWSPTEPDVFASCSVDG-HIAIWDTR---VGK----SAL--TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFM 349 (359)
Q Consensus 280 ~~v~~sp~~~~~las~s~Dg-~I~iwD~r---~~~----~~~--~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~ 349 (359)
+.|+|+|++. .|..+...+ .|..++.. .+. ... ....++......++++++|.+++.... .+.|.
T Consensus 198 ~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~----~~~V~ 272 (343)
T 2qe8_A 198 NGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLA----HSAIG 272 (343)
T ss_dssp EEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGG----GTEEE
T ss_pred ceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccC----CCeEE
Confidence 8899999998 555555444 55555532 110 000 112233445667899999987776654 67799
Q ss_pred EEeCcCCc
Q 018235 350 ILDCSRGE 357 (359)
Q Consensus 350 iwd~~~g~ 357 (359)
+|+...|+
T Consensus 273 ~~d~~~G~ 280 (343)
T 2qe8_A 273 VITSADRA 280 (343)
T ss_dssp EEETTTTE
T ss_pred EEECCCCC
Confidence 99884443
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.06 E-value=0.00023 Score=66.79 Aligned_cols=156 Identities=19% Similarity=0.127 Sum_probs=101.4
Q ss_pred eeeEEEeCCCCcEEEEEeCC------CcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCC---CCceEEEEeC
Q 018235 168 VNRIRAMTQNPHICASWADT------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH---KDEGYAIDWN 238 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~d------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~l~~s 238 (359)
-..+.+.|++ +++++..+ |.|.++|..+ .+.+..+..- ..-.|.+.|+
T Consensus 140 Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T---------------------~~v~~~~~~~~~~~~~~Yd~~~~ 196 (462)
T 2ece_A 140 LHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYS---------------------FEPLGKWEIDRGDQYLAYDFWWN 196 (462)
T ss_dssp EEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTT---------------------CCEEEECCSBCTTCCCCCCEEEE
T ss_pred ccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCC---------------------CeEEEEEccCCCCccccceEEEC
Confidence 3456788988 55565554 7899999886 3444444311 1235678899
Q ss_pred CCCCCeEEEEc-------------------CCCcEEEEecCCCCcceecCccccC--CCCCeEEEEe--cCCCCCEEEEE
Q 018235 239 PITTGRLVTGD-------------------CNSCIYLWEPASDATWNVDPNPFIG--HSASVEDLQW--SPTEPDVFASC 295 (359)
Q Consensus 239 p~~~~~l~sgs-------------------~dg~I~lwd~~~~~~~~~~~~~~~~--h~~~V~~v~~--sp~~~~~las~ 295 (359)
|++. .+++.. ...+|.+||+.+ ++.. ..+.- .......|.| +|+++..++++
T Consensus 197 p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~---~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 197 LPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRI---HSLTLGEENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp TTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEE---EEEESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred CCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcEe---eEEecCCCCCccceeEeeECCCCCEEEEEE
Confidence 9998 777774 468999999986 4433 23322 1123445555 99999777777
Q ss_pred e-----CCCcEEEEECCCCCC-ceEE--eecC----------------CCCEEEEEEcCCCCeEEEEeeecccceEEEEE
Q 018235 296 S-----VDGHIAIWDTRVGKS-ALTS--FKAH----------------NADVNVISWNRCWLAVCWHLEVMMEHFLFMIL 351 (359)
Q Consensus 296 s-----~Dg~I~iwD~r~~~~-~~~~--~~~h----------------~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iw 351 (359)
- .+++|.+|....+.- .... +... ......|.+++++++|..+.+. .+.|.++
T Consensus 272 e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg---~d~Vavf 348 (462)
T 2ece_A 272 VVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG---IGEVRQY 348 (462)
T ss_dssp EEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT---TTEEEEE
T ss_pred eeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC---CCEEEEE
Confidence 7 788888776544310 1111 1110 2346788999999999888663 6789999
Q ss_pred eCc
Q 018235 352 DCS 354 (359)
Q Consensus 352 d~~ 354 (359)
++.
T Consensus 349 dV~ 351 (462)
T 2ece_A 349 DIS 351 (462)
T ss_dssp ECS
T ss_pred Eec
Confidence 875
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.04 E-value=0.00095 Score=62.69 Aligned_cols=141 Identities=11% Similarity=0.071 Sum_probs=90.4
Q ss_pred CCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec------C-CCCceEEEEeCCCCCCeEEE
Q 018235 175 TQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG------G-HKDEGYAIDWNPITTGRLVT 247 (359)
Q Consensus 175 p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~l~~sp~~~~~l~s 247 (359)
+++..+++++..+++|+|+|+....... +.+.++. . -...-+.+..+|++ ++++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p-----------------~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs 153 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREP-----------------KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYIS 153 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSC-----------------EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCc-----------------eeeeeechhhcccccCCCcccceeECCCe--EEEE
Confidence 6677888999999999999997632211 1222231 0 01134567778887 6666
Q ss_pred EcCC------CcEEEEecCCCCcceecCcccc--CCC-CCeEEEEecCCCCCEEEEEe-------------------CCC
Q 018235 248 GDCN------SCIYLWEPASDATWNVDPNPFI--GHS-ASVEDLQWSPTEPDVFASCS-------------------VDG 299 (359)
Q Consensus 248 gs~d------g~I~lwd~~~~~~~~~~~~~~~--~h~-~~V~~v~~sp~~~~~las~s-------------------~Dg 299 (359)
+..+ |.|.+.|..+ .+.+ ..+. ... .--+++.|+|.+. ++++.. ...
T Consensus 154 ~~g~~~g~~~g~v~vlD~~T-~~v~---~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d 228 (462)
T 2ece_A 154 ALGNEEGEGPGGILMLDHYS-FEPL---GKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGN 228 (462)
T ss_dssp EEEETTSCSCCEEEEECTTT-CCEE---EECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCC
T ss_pred cCCCcCCCCCCeEEEEECCC-CeEE---EEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCC
Confidence 5555 7899999887 3333 2221 122 2345789999999 766663 478
Q ss_pred cEEEEECCCCCCceEEeecC--CCCEEEEEE--cCCCCeEEEEee
Q 018235 300 HIAIWDTRVGKSALTSFKAH--NADVNVISW--NRCWLAVCWHLE 340 (359)
Q Consensus 300 ~I~iwD~r~~~~~~~~~~~h--~~~V~~i~~--s~~~~~l~~~~~ 340 (359)
+|.+||+.++ +.+.++..- ......|.| +|+++++...+.
T Consensus 229 ~V~v~D~~~~-k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 229 RIHFWDLRKR-KRIHSLTLGEENRMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp EEEEEETTTT-EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred EEEEEECCCC-cEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence 9999999986 666666432 123445555 999987776654
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.01 E-value=0.00011 Score=67.07 Aligned_cols=172 Identities=10% Similarity=-0.001 Sum_probs=96.4
Q ss_pred CCceeeEEEeCCCCcEEEEEe---CCCcEEEEECCCCcc-c-cccccccccCCCCCCCCCCCcEEecC------CCCceE
Q 018235 165 QGCVNRIRAMTQNPHICASWA---DTGHVQVWDLRSHLN-A-LAESETIVGQGAPQVSNQSPLVKFGG------HKDEGY 233 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s---~dg~V~iwd~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~ 233 (359)
...++.+++.+.+..++++-. .++.|.+||+..... . +...................+..... ......
T Consensus 119 ~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 198 (343)
T 2qe8_A 119 NSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVN 198 (343)
T ss_dssp TCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEE
T ss_pred ccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccc
Confidence 346799999986546777766 678999999875211 1 00000000000000000000000000 112468
Q ss_pred EEEeCCCCCCeEEEEcCCC-cEEEEecCC--CCcc----eecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 234 AIDWNPITTGRLVTGDCNS-CIYLWEPAS--DATW----NVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg-~I~lwd~~~--~~~~----~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
+|+|+|++. .|+.++..+ .|..++... .... ........++......+++++++. ++++...++.|.+||.
T Consensus 199 gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 199 GIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEET
T ss_pred eeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC-EEEEccCCCeEEEEEC
Confidence 899999997 777776665 454444321 0100 000001223444566789999987 9999999999999998
Q ss_pred CCCCCceEEee--cCCCCEEEEEEcCCCCeEEEEee
Q 018235 307 RVGKSALTSFK--AHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 307 r~~~~~~~~~~--~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
..+ . +..+. .+...+..++|.+++.+++.+..
T Consensus 277 ~~G-~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 277 ADR-A-YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp TTT-E-EEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred CCC-C-EEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 444 3 23332 23456899999999887777653
No 222
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.99 E-value=0.0026 Score=54.74 Aligned_cols=144 Identities=15% Similarity=0.157 Sum_probs=93.7
Q ss_pred CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEE
Q 018235 177 NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYL 256 (359)
Q Consensus 177 ~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~l 256 (359)
+..+.+..-.++.+.+||..+ .+.+.++.. ..++++|++ ++. .|+.+..++.|.+
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~t---------------------l~~~~ti~~-~~~Gwglt~--dg~-~L~vSdgs~~l~~ 128 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLAT---------------------LTPRARFRY-PGEGWALTS--DDS-HLYMSDGTAVIRK 128 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTT---------------------TEEEEEEEC-SSCCCEEEE--CSS-CEEEECSSSEEEE
T ss_pred CCEEEEEEeeCCEEEEEECCc---------------------CcEEEEEeC-CCCceEEee--CCC-EEEEECCCCeEEE
Confidence 445666666789999999987 455666654 346678876 454 5666667889999
Q ss_pred EecCCCCcceecCccccCCC---CCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC-------------C
Q 018235 257 WEPASDATWNVDPNPFIGHS---ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH-------------N 320 (359)
Q Consensus 257 wd~~~~~~~~~~~~~~~~h~---~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h-------------~ 320 (359)
+|+.+. +.... .....+. ..++.+.|. ++. ++|....+..|.+.|.+++ +.+..+... .
T Consensus 129 iDp~t~-~~~~~-I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~ 203 (243)
T 3mbr_X 129 LDPDTL-QQVGS-IKVTAGGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPASG-KVVAWIDLQALVPDADALTDSTN 203 (243)
T ss_dssp ECTTTC-CEEEE-EECEETTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTS
T ss_pred EeCCCC-eEEEE-EEEccCCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCCC-CEEEEEECCcCccccccccCCcC
Confidence 999873 32210 1111121 345677776 566 8888878889999999998 666555311 1
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEE
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMI 350 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~i 350 (359)
.-.|.|+|+|.+..|.........-..|++
T Consensus 204 ~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 204 DVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp SCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 356999999988777666543333333444
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.98 E-value=0.00013 Score=65.29 Aligned_cols=141 Identities=9% Similarity=0.038 Sum_probs=87.7
Q ss_pred ceeeEEEeCCCCcEEEE----EeC-------------CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC
Q 018235 167 CVNRIRAMTQNPHICAS----WAD-------------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK 229 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat----~s~-------------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 229 (359)
.++.+.+.|++ .+++| |.. .+.|+.||... .... .+. ..
T Consensus 132 ~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~---------------------g~~~-~~~-~~ 187 (305)
T 3dr2_A 132 SPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG---------------------SPLQ-RMA-DL 187 (305)
T ss_dssp CCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS---------------------CCCE-EEE-EE
T ss_pred CCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCC---------------------CcEE-EEe-cC
Confidence 46789999988 67775 321 24556665533 2222 222 33
Q ss_pred CceEEEEeCCCCCCeEEEEcCC------CcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEeCCCcEE
Q 018235 230 DEGYAIDWNPITTGRLVTGDCN------SCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIA 302 (359)
Q Consensus 230 ~~v~~l~~sp~~~~~l~sgs~d------g~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~ 302 (359)
....+++|+|++. .|+.++.. +.|.+|++...+ .. ....+ .........+++++++. ++++. .+ .|.
T Consensus 188 ~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~-l~-~~~~~~~~~~~~pdgi~~d~~G~-lwv~~-~~-gv~ 261 (305)
T 3dr2_A 188 DHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGA-LH-DRRHFASVPDGLPDGFCVDRGGW-LWSSS-GT-GVC 261 (305)
T ss_dssp SSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTE-EE-EEEEEECCSSSCCCSEEECTTSC-EEECC-SS-EEE
T ss_pred CCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCC-cc-CCeEEEECCCCCCCeEEECCCCC-EEEec-CC-cEE
Confidence 4567899999998 66666554 689999986532 11 01111 11233456789999998 66554 44 499
Q ss_pred EEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEee
Q 018235 303 IWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 303 iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
+|+... +.+..+..+. .+.+++|.+++..|..+..
T Consensus 262 ~~~~~g--~~~~~~~~~~-~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 262 VFDSDG--QLLGHIPTPG-TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EECTTS--CEEEEEECSS-CCCEEEECTTSCEEEEEET
T ss_pred EECCCC--CEEEEEECCC-ceeEEEEeCCCCEEEEEcC
Confidence 999853 5555665444 5888999998887766654
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.95 E-value=0.0018 Score=56.28 Aligned_cols=157 Identities=16% Similarity=0.192 Sum_probs=99.6
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.........+.+..+.+..-.++.+.+||..+ .+.+.++.. ..++++|++ ++. .|
T Consensus 85 ~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t---------------------~~~~~ti~~-~~eG~glt~--dg~-~L 139 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN---------------------LRQVRSFNY-DGEGWGLTH--NDQ-YL 139 (262)
T ss_dssp TTCCEEEEEEETTEEEEEESSSSEEEEEETTT---------------------CCEEEEEEC-SSCCCCEEE--CSS-CE
T ss_pred CccceeEEEEeCCEEEEEEeeCCEEEEEECcc---------------------CcEEEEEEC-CCCceEEec--CCC-EE
Confidence 34433333333435655555789999999987 466666654 336667775 455 66
Q ss_pred EEEcCCCcEEEEecCCCCcceecCcc-ccCCC-CCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC----
Q 018235 246 VTGDCNSCIYLWEPASDATWNVDPNP-FIGHS-ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH---- 319 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~-~~~h~-~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h---- 319 (359)
+.++.++.|+++|+.+. +....+.. ..+.. ..++.+.|. ++. +++....+..|.+.|.+++ +.+..+...
T Consensus 140 ~~SdGs~~i~~iDp~T~-~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG-~V~~~Id~~~L~~ 215 (262)
T 3nol_A 140 IMSDGTPVLRFLDPESL-TPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETG-KVTGIIDLNGILA 215 (262)
T ss_dssp EECCSSSEEEEECTTTC-SEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTC-BEEEEEECTTGGG
T ss_pred EEECCCCeEEEEcCCCC-eEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCC-cEEEEEECCcCcc
Confidence 66666788999999873 32211011 11112 445678886 666 8888888899999999998 666555321
Q ss_pred --------CCCEEEEEEcCCCCeEEEEeeecccceEEEEE
Q 018235 320 --------NADVNVISWNRCWLAVCWHLEVMMEHFLFMIL 351 (359)
Q Consensus 320 --------~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iw 351 (359)
..-.|.|+|+|++..|.........-..|++-
T Consensus 216 ~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp GSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred ccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 23569999999988777766544333445543
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.93 E-value=0.001 Score=58.34 Aligned_cols=164 Identities=7% Similarity=-0.020 Sum_probs=103.5
Q ss_pred EEEEecCCCc--eeeEEEeCCCCcEEEEEeC--CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-CCCCce
Q 018235 158 QLRKVAHQGC--VNRIRAMTQNPHICASWAD--TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEG 232 (359)
Q Consensus 158 ~~~~~~H~~~--V~~i~~~p~~~~~lat~s~--dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v 232 (359)
....++|... ...+.|++++ .++++.+. ++.|+++|+.+ .+.+..+. +....+
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~t---------------------g~v~~~i~l~~~~fg 68 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQT---------------------GKVENIHKMDDSYFG 68 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTT---------------------CCEEEEEECCTTCCE
T ss_pred EEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCC---------------------CCEEEEEecCCCcce
Confidence 3566688864 5799999987 66666543 68999999987 44444432 222233
Q ss_pred EEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCc
Q 018235 233 YAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312 (359)
Q Consensus 233 ~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~ 312 (359)
.++++. +..++++.-.++.+.++|..+ .+.+ ..+..... ....+++++..++++- .++.|.++|..+. +.
T Consensus 69 eGi~~~--g~~lyv~t~~~~~v~viD~~t-~~v~---~~i~~g~~--~g~glt~Dg~~l~vs~-gs~~l~viD~~t~-~v 138 (266)
T 2iwa_A 69 EGLTLL--NEKLYQVVWLKNIGFIYDRRT-LSNI---KNFTHQMK--DGWGLATDGKILYGSD-GTSILYEIDPHTF-KL 138 (266)
T ss_dssp EEEEEE--TTEEEEEETTCSEEEEEETTT-TEEE---EEEECCSS--SCCEEEECSSSEEEEC-SSSEEEEECTTTC-CE
T ss_pred EEEEEe--CCEEEEEEecCCEEEEEECCC-CcEE---EEEECCCC--CeEEEEECCCEEEEEC-CCCeEEEEECCCC-cE
Confidence 455655 332556666788999999976 4433 22321111 1233556777677665 6789999999987 55
Q ss_pred eEEeec--C---CCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 313 LTSFKA--H---NADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 313 ~~~~~~--h---~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+..+.. + -..++.+.|. ++.+. .... ..+.|.+.|+.+++|
T Consensus 139 ~~~I~Vg~~~~p~~~~nele~~-dg~ly-vn~~---~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 139 IKKHNVKYNGHRVIRLNELEYI-NGEVW-ANIW---QTDCIARISAKDGTL 184 (266)
T ss_dssp EEEEECEETTEECCCEEEEEEE-TTEEE-EEET---TSSEEEEEETTTCCE
T ss_pred EEEEEECCCCcccccceeEEEE-CCEEE-EecC---CCCeEEEEECCCCcE
Confidence 555532 1 1247888988 66433 2221 256799999998875
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.91 E-value=0.00028 Score=65.16 Aligned_cols=73 Identities=8% Similarity=-0.015 Sum_probs=52.3
Q ss_pred EEecCCCCCEEEEEe---C-----CCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 282 LQWSPTEPDVFASCS---V-----DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 282 v~~sp~~~~~las~s---~-----Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
+.++|++..++++.. . ++.+.++|+.+. +.+..+.... ..+.|.|+|+++.+++... ..++.|.++|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~-~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~--~~~~~VsVID~ 344 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG-QTSGPISNGH-DSDAIIAAQDGASDNYANS--AGTEVLDIYDA 344 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC-CEEECCEEEE-EECEEEECCSSSCEEEEEE--TTTTEEEEEES
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC-eEEEEEECCC-CcceEEECCCCCEEEEEcc--CCCCeEEEEEC
Confidence 678999885666544 2 235669999997 6666664333 5889999999986666544 11688999999
Q ss_pred cCCcc
Q 018235 354 SRGEI 358 (359)
Q Consensus 354 ~~g~v 358 (359)
.++++
T Consensus 345 ~t~kv 349 (368)
T 1mda_H 345 ASDQD 349 (368)
T ss_dssp SSCEE
T ss_pred CCCcE
Confidence 98875
No 227
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.86 E-value=0.0095 Score=53.45 Aligned_cols=166 Identities=9% Similarity=-0.058 Sum_probs=101.1
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
........+.|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+.
T Consensus 27 ~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~-----------------~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-----------------VSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------------CEEEECSSCSCCCEEEEETTTT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC-----------------CcccEEEEeCCCCCcCEEEEeecCC
Confidence 44566788999987657888877889999998865100 0011112222222335666665554
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-CcEEEEECCCCCCceEEe-ecCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSF-KAHN 320 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~-~~h~ 320 (359)
.++++-...+.|.+.++.. .... ..+...-....+++++|.+..++.+.... +.|...++... ....+ ...-
T Consensus 90 ~ly~~d~~~~~I~~~~~~g-~~~~---~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~--~~~~~~~~~~ 163 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKG-VKRK---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSLVTENI 163 (316)
T ss_dssp EEEEEETTTTEEEEEETTS-SSEE---EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--CEEEEECSSC
T ss_pred eEEEEECCCCEEEEEeCCC-CceE---EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC--CeEEEEECCC
Confidence 3556666788999999854 2211 11222335678999999776577776554 78888887653 22222 2233
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
...+.|+|++++..|.|.... .+.|..++..
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~---~~~I~~~d~d 194 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSK---LHSISSIDVN 194 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETT
T ss_pred CCceEEEEeccCCEEEEEECC---CCeEEEEecC
Confidence 467899999988888777542 4567777664
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.84 E-value=0.0044 Score=54.25 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=93.0
Q ss_pred eEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEc
Q 018235 170 RIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD 249 (359)
Q Consensus 170 ~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs 249 (359)
.+.+. +..+.++.-.++.|.++|..+ .+.+.++..-..++++|++ ++. .|+.+.
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t---------------------~~v~~~i~~g~~~g~glt~--Dg~-~l~vs~ 123 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRT---------------------LSNIKNFTHQMKDGWGLAT--DGK-ILYGSD 123 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTT---------------------TEEEEEEECCSSSCCEEEE--CSS-SEEEEC
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCC---------------------CcEEEEEECCCCCeEEEEE--CCC-EEEEEC
Confidence 34444 435666666889999999987 3445555322245566665 565 555566
Q ss_pred CCCcEEEEecCCCCcceecCccccCC---CCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC-------
Q 018235 250 CNSCIYLWEPASDATWNVDPNPFIGH---SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH------- 319 (359)
Q Consensus 250 ~dg~I~lwd~~~~~~~~~~~~~~~~h---~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h------- 319 (359)
.++.|.++|+.+. +.... .....+ -..++.+.|. ++. ++++...++.|.+.|..++ +.+..+...
T Consensus 124 gs~~l~viD~~t~-~v~~~-I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~ 198 (266)
T 2iwa_A 124 GTSILYEIDPHTF-KLIKK-HNVKYNGHRVIRLNELEYI-NGE-VWANIWQTDCIARISAKDG-TLLGWILLPNLRKKLI 198 (266)
T ss_dssp SSSEEEEECTTTC-CEEEE-EECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTTC-CEEEEEECHHHHHHHH
T ss_pred CCCeEEEEECCCC-cEEEE-EEECCCCcccccceeEEEE-CCE-EEEecCCCCeEEEEECCCC-cEEEEEECCCcccccc
Confidence 7889999999773 32210 111111 1246788888 665 8888878899999999998 666666421
Q ss_pred ------CCCEEEEEEcCCCCeEEEEeee
Q 018235 320 ------NADVNVISWNRCWLAVCWHLEV 341 (359)
Q Consensus 320 ------~~~V~~i~~s~~~~~l~~~~~~ 341 (359)
....+.|+|+|++..+..+...
T Consensus 199 ~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 199 DEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp HTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred cccccccCceEEEEEcCCCCEEEEECCC
Confidence 1356999999999877766553
No 229
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.84 E-value=0.0088 Score=54.55 Aligned_cols=161 Identities=8% Similarity=-0.063 Sum_probs=102.6
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
.......+.|.+.+..++.+-...+.|+.+++.. ......+........+|++.+.+..
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g---------------------~~~~~~~~~~~~~p~glavd~~~g~ 129 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNG---------------------SNVEEVVSTGLESPGGLAVDWVHDK 129 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---------------------CSCEEEECSSCSCCCEEEEETTTTE
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCC---------------------CCceEEEeCCCCCccEEEEecCCCe
Confidence 3445788999987657777777788999998876 1222222221223346666655543
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-CcEEEEECCCCCCceEEe-ecCCC
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSF-KAHNA 321 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~-~~h~~ 321 (359)
++++-...+.|.+.++.. .... ..+...-....+|+++|.+..++.+-... +.|..+++... ....+ ...-.
T Consensus 130 ly~~d~~~~~I~~~~~dG-~~~~---~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~~~~~~~~~ 203 (349)
T 3v64_C 130 LYWTDSGTSRIEVANLDG-AHRK---VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--GRRIIADTHLF 203 (349)
T ss_dssp EEEEETTTTEEEEEETTS-CSCE---EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEESCCSSCS
T ss_pred EEEEcCCCCeEEEEcCCC-CceE---EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC--CcEEEEECCCC
Confidence 556666678899998864 2211 11222335678999999776577777766 88999988754 22222 22334
Q ss_pred CEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 322 DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 322 ~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
..+.|+|+|.+..|.|.... .+.|..++..
T Consensus 204 ~PnGla~d~~~~~lY~aD~~---~~~I~~~~~d 233 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAK---HHVIERANLD 233 (349)
T ss_dssp CEEEEEEETTTTEEEEEETT---TTEEEEEETT
T ss_pred CcceEEEeCCCCEEEEEECC---CCEEEEEeCC
Confidence 57899999988877777542 4567777654
No 230
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.83 E-value=0.00072 Score=62.50 Aligned_cols=99 Identities=12% Similarity=-0.032 Sum_probs=63.1
Q ss_pred cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEc----------CCCcEEEEe
Q 018235 189 HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD----------CNSCIYLWE 258 (359)
Q Consensus 189 ~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs----------~dg~I~lwd 258 (359)
.|.+||... .+.+..+..-..+ .+.+||+++ +|+.+. .++.|.+||
T Consensus 48 ~v~v~D~~t---------------------~~~~~~i~~g~~p--~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 48 QQWVLDAGS---------------------GSILGHVNGGFLP--NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred EEEEEECCC---------------------CeEEEEecCCCCC--CeEECCCCC-EEEEEeccccccccCCCCCeEEEEE
Confidence 889999876 3444444432333 899999998 666654 367899999
Q ss_pred cCCCCcceecCcccc--C---CCCCeEEEEecCCCCCEEEEEeC-CCcEEEEECCCCCCceEE
Q 018235 259 PASDATWNVDPNPFI--G---HSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 259 ~~~~~~~~~~~~~~~--~---h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~ 315 (359)
+.+ .+.... .... . +......+.|+|+++.++++... ++.|.++| .++ +.+..
T Consensus 104 ~~t-~~~~~~-i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~-~~~~~ 162 (373)
T 2mad_H 104 PVT-FLPIAD-IELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG-SSDDQ 162 (373)
T ss_pred CCC-CcEEEE-EECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCC-CEEeE
Confidence 976 332210 0111 0 11234579999999944444433 58899999 876 55555
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.82 E-value=0.0011 Score=57.78 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=90.9
Q ss_pred CCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEcCCCcEE
Q 018235 176 QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIY 255 (359)
Q Consensus 176 ~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~ 255 (359)
.+..+.+..-.++.+.+||..+ .+.+.++.. ..++++|++ ++. .|+.++.++.|+
T Consensus 104 ~g~~Ly~ltw~~~~v~V~D~~T---------------------l~~~~ti~~-~~eGwGLt~--Dg~-~L~vSdGs~~l~ 158 (268)
T 3nok_A 104 DGERLYQLTWTEGLLFTWSGMP---------------------PQRERTTRY-SGEGWGLCY--WNG-KLVRSDGGTMLT 158 (268)
T ss_dssp CSSCEEEEESSSCEEEEEETTT---------------------TEEEEEEEC-SSCCCCEEE--ETT-EEEEECSSSEEE
T ss_pred eCCEEEEEEccCCEEEEEECCc---------------------CcEEEEEeC-CCceeEEec--CCC-EEEEECCCCEEE
Confidence 3435665556789999999987 455666654 345677775 455 676667788999
Q ss_pred EEecCCCCcceecCccccCCC---CCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC-------------
Q 018235 256 LWEPASDATWNVDPNPFIGHS---ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH------------- 319 (359)
Q Consensus 256 lwd~~~~~~~~~~~~~~~~h~---~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h------------- 319 (359)
++|+.+. +.... .....+. ..++.+.|. ++. +++....+..|.+.|.+++ +.+..+...
T Consensus 159 ~iDp~T~-~v~~~-I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG-~V~~~Idl~~L~~~~~~~~~~~ 233 (268)
T 3nok_A 159 FHEPDGF-ALVGA-VQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPATG-TVVGVIDASALTRAVAGQVTNP 233 (268)
T ss_dssp EECTTTC-CEEEE-EECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTC-BEEEEEECHHHHHHHTTTCCCT
T ss_pred EEcCCCC-eEEEE-EEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCCC-cEEEEEECCCCcccccccccCc
Confidence 9999873 32211 1111122 345778887 666 8888888899999999998 665555321
Q ss_pred CCCEEEEEEcCCCCeEEEEee
Q 018235 320 NADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 320 ~~~V~~i~~s~~~~~l~~~~~ 340 (359)
..-.|.|+|+|.+..|..+..
T Consensus 234 ~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 234 EAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCCEEEEEECTTTCCEEEEET
T ss_pred CCceEEEEEcCCCCEEEEeCC
Confidence 135799999998776665544
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.80 E-value=0.012 Score=50.94 Aligned_cols=159 Identities=8% Similarity=-0.069 Sum_probs=98.9
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.....+++.+.+..++++-...+.|.++++... ..............+++++|.+..++
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~---------------------~~~~~~~~~~~~P~~i~vd~~~g~ly 137 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---------------------QRRVLFDTGLVNPRGIVTDPVRGNLY 137 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECSSCSSEEEEEEETTTTEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCC---------------------CEEEEEECCCCCccEEEEeeCCCEEE
Confidence 467899999976578888778889999998651 11111211123567899999665244
Q ss_pred EEEcC--CCcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCC
Q 018235 246 VTGDC--NSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (359)
Q Consensus 246 ~sgs~--dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (359)
++... .+.|..+++.. ... ..+ ...-.....++++|++..++++....+.|.++|+... .....+. ....
T Consensus 138 v~~~~~~~~~I~~~~~dg-~~~----~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~-~~~~ 210 (267)
T 1npe_A 138 WTDWNRDNPKIETSHMDG-TNR----RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKVLE-GLQY 210 (267)
T ss_dssp EEECCSSSCEEEEEETTS-CCC----EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEEEE-CCCS
T ss_pred EEECCCCCcEEEEEecCC-CCc----EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEEec-CCCC
Confidence 44433 46888888753 221 111 1223467899999987757888888899999999764 2222222 2233
Q ss_pred EEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 323 VNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 323 V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
...|+.. +..+.+.... .+.|..++..+|+
T Consensus 211 P~gi~~d--~~~lyva~~~---~~~v~~~d~~~g~ 240 (267)
T 1npe_A 211 PFAVTSY--GKNLYYTDWK---TNSVIAMDLAISK 240 (267)
T ss_dssp EEEEEEE--TTEEEEEETT---TTEEEEEETTTTE
T ss_pred ceEEEEe--CCEEEEEECC---CCeEEEEeCCCCC
Confidence 4566654 4555555432 4667888877665
No 233
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.80 E-value=0.0049 Score=57.10 Aligned_cols=162 Identities=8% Similarity=-0.072 Sum_probs=102.0
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
.......+.|.+.+..++.+-...+.|+.+++.. ......+........+|++.+.+..
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g---------------------~~~~~~~~~~~~~p~glavd~~~g~ 172 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNG---------------------SNVEEVVSTGLESPGGLAVDWVHDK 172 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---------------------CCEEEEECSSCSCCCCEEEETTTTE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC---------------------CCcEEEEeCCCCCccEEEEEeCCCe
Confidence 3455788999986657777777788999998876 1111122211223345666655543
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-CcEEEEECCCCCCceEEeecCCCC
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSFKAHNAD 322 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~~~h~~~ 322 (359)
++++-...+.|.+.++.. .... ..+...-....+|+++|.+..++.+-... +.|..+++... .....+...-..
T Consensus 173 lY~~d~~~~~I~~~~~dg-~~~~---~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~ 247 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDG-AHRK---VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFW 247 (386)
T ss_dssp EEEEETTTTEEEECBTTS-CSCE---EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSC
T ss_pred EEEEcCCCCeEEEEeCCC-CceE---EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCC
Confidence 556666677888888754 2211 11222335678999999877577777666 88998888764 222222333445
Q ss_pred EEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 323 VNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 323 V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.+.|+|+|.+..|.|.... .+.|..++..
T Consensus 248 PnGlavd~~~~~lY~aD~~---~~~I~~~d~d 276 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAK---HHVIERANLD 276 (386)
T ss_dssp EEEEEEEGGGTEEEEEETT---TTEEEEECTT
T ss_pred eeeEEEeCCCCEEEEEECC---CCEEEEEeCC
Confidence 7899999888877777542 4567777654
No 234
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.78 E-value=0.00028 Score=65.34 Aligned_cols=139 Identities=5% Similarity=-0.086 Sum_probs=88.4
Q ss_pred EeCCCCcEEEEEeC----CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEE
Q 018235 173 AMTQNPHICASWAD----TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTG 248 (359)
Q Consensus 173 ~~p~~~~~lat~s~----dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg 248 (359)
..|++..++++-.. ++.|.+.|..+ .+.+..+..-..+ . +.++|+++ +|+.+
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t---------------------~~v~~~I~vG~~P-~-va~spDG~-~lyVa 95 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEA---------------------GRVIGMIDGGFLP-N-PVVADDGS-FIAHA 95 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTT---------------------TEEEEEEEECSSC-E-EEECTTSS-CEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCC---------------------CeEEEEEECCCCC-c-EEECCCCC-EEEEE
Confidence 35667455555433 68999999987 4555555443334 3 99999998 55554
Q ss_pred c----------CCCcEEEEecCCCCcceecCcccc-CC------CCCeEEEEecCCCCCEEEEEeC-CCcEEEEECCCCC
Q 018235 249 D----------CNSCIYLWEPASDATWNVDPNPFI-GH------SASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGK 310 (359)
Q Consensus 249 s----------~dg~I~lwd~~~~~~~~~~~~~~~-~h------~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~ 310 (359)
+ .++.|.+||..+ .+.. ..+. +. ......+.|+|+++.++++... ++.|.++|+.+.
T Consensus 96 n~~~~r~~~G~~~~~VsviD~~t-~~v~---~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~- 170 (386)
T 3sjl_D 96 STVFSRIARGERTDYVEVFDPVT-LLPT---ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK- 170 (386)
T ss_dssp EEEEEETTEEEEEEEEEEECTTT-CCEE---EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT-
T ss_pred cccccccccCCCCCEEEEEECCC-CeEE---EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC-
Confidence 3 367899999987 4433 1121 11 1245568999999955555433 789999999997
Q ss_pred CceEEeecCCC-CE------EEEEEcCCCCeEEEEee
Q 018235 311 SALTSFKAHNA-DV------NVISWNRCWLAVCWHLE 340 (359)
Q Consensus 311 ~~~~~~~~h~~-~V------~~i~~s~~~~~l~~~~~ 340 (359)
+.+.++..-.. .+ .-++.+++|+++..+..
T Consensus 171 ~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 171 AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp EEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred cEEEEEECCCcceeecCCCceeEEECCCCCEEEEECC
Confidence 66666632111 00 11366788887777765
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.78 E-value=0.00081 Score=58.56 Aligned_cols=161 Identities=12% Similarity=0.071 Sum_probs=98.6
Q ss_pred EEEecCCCce--eeEEEeCCCCcEEEEEeCCC--cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC-ceE
Q 018235 159 LRKVAHQGCV--NRIRAMTQNPHICASWADTG--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-EGY 233 (359)
Q Consensus 159 ~~~~~H~~~V--~~i~~~p~~~~~lat~s~dg--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~ 233 (359)
.+.++|...- ..+.|+ ++ .++.+.+.+| .|+++|+.+ ++.+..+..... .+.
T Consensus 34 v~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~T---------------------gkv~~~~~l~~~~Fge 90 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIES---------------------GKTLQQIELGKRYFGE 90 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTT---------------------CCEEEEEECCTTCCEE
T ss_pred EEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCC---------------------CcEEEEEecCCcccee
Confidence 4566887554 888898 55 6777777766 899999987 444444433221 223
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCce
Q 018235 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (359)
++.. .+..++++.-.++.+.+||..+ .+.+ ..+.... ....+++++..+++|-+ ++.|.++|..+. +.+
T Consensus 91 Git~--~g~~ly~ltw~~~~v~v~D~~t-~~~~---~ti~~~~---eG~glt~dg~~L~~SdG-s~~i~~iDp~T~-~v~ 159 (262)
T 3nol_A 91 GISD--WKDKIVGLTWKNGLGFVWNIRN-LRQV---RSFNYDG---EGWGLTHNDQYLIMSDG-TPVLRFLDPESL-TPV 159 (262)
T ss_dssp EEEE--ETTEEEEEESSSSEEEEEETTT-CCEE---EEEECSS---CCCCEEECSSCEEECCS-SSEEEEECTTTC-SEE
T ss_pred EEEE--eCCEEEEEEeeCCEEEEEECcc-CcEE---EEEECCC---CceEEecCCCEEEEECC-CCeEEEEcCCCC-eEE
Confidence 3444 3432445555688999999987 3333 2332211 22233456665666654 678999999987 566
Q ss_pred EEeecC--C---CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 314 TSFKAH--N---ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 314 ~~~~~h--~---~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.++... . ..+|.+.|. +|.+. ...- ..+.|.+.|+.+|+|
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~-~G~ly-an~w---~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWV-DGEIF-ANVW---QTNKIVRIDPETGKV 204 (262)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEE-EEET---TSSEEEEECTTTCBE
T ss_pred EEEEeccCCccccccceeEEE-CCEEE-EEEc---cCCeEEEEECCCCcE
Confidence 665321 1 346778887 56533 2221 256788899998876
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.75 E-value=0.00085 Score=63.08 Aligned_cols=161 Identities=10% Similarity=0.102 Sum_probs=97.1
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcE----EecCCCCce-EEEEeCCCCCCeE
Q 018235 171 IRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV----KFGGHKDEG-YAIDWNPITTGRL 245 (359)
Q Consensus 171 i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~h~~~v-~~l~~sp~~~~~l 245 (359)
....|.+...+++.+.||.+.+.++.. .+... .+.....++ ..+.+.+++. .+
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~~---------------------~~v~~~~~~~~~v~~~p~~~~~~~~~dg~-~~ 279 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFAD---------------------GETKVTNTEVFHTEDELLINHPAFSLRSG-RL 279 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECCT---------------------TCCEEEECCCCSCTTSCBCSCCEECTTTC-EE
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECCC---------------------CcEEEEeeeeeccCCCceeeEeeecCCCC-EE
Confidence 344555556677778899998888833 11111 111111111 1356788887 55
Q ss_pred EEEcCCCcEEEEecCCCCcceecCcccc--------CCCCCeEEEEecCCCCCEEEEEeC---------CCcEEEEECCC
Q 018235 246 VTGDCNSCIYLWEPASDATWNVDPNPFI--------GHSASVEDLQWSPTEPDVFASCSV---------DGHIAIWDTRV 308 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~--------~h~~~V~~v~~sp~~~~~las~s~---------Dg~I~iwD~r~ 308 (359)
+..+..+.+.+.|.............+. ........+.++|++..++++... .+.|.++|+.+
T Consensus 280 ~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T 359 (426)
T 3c75_H 280 VWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET 359 (426)
T ss_dssp EEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred EEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC
Confidence 4555678999999865221111000000 011122236899998866666542 35799999999
Q ss_pred CCCceEEeecCCCCEEEEEEcCCCC-eEEEEeeecccceEEEEEeCcCCcc
Q 018235 309 GKSALTSFKAHNADVNVISWNRCWL-AVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 309 ~~~~~~~~~~h~~~V~~i~~s~~~~-~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
. +.+.++.... ..+.|.|+|+++ .++.... .++.|.++|..++++
T Consensus 360 ~-kvv~~I~vg~-~P~gia~spDg~~~lyv~n~---~s~~VsVID~~t~kv 405 (426)
T 3c75_H 360 G-ERINKIELGH-EIDSINVSQDAEPLLYALSA---GTQTLHIYDAATGEE 405 (426)
T ss_dssp C-CEEEEEEEEE-EECEEEECCSSSCEEEEEET---TTTEEEEEETTTCCE
T ss_pred C-eEEEEEECCC-CcCeEEEccCCCEEEEEEcC---CCCeEEEEECCCCCE
Confidence 8 6777774322 478999999999 6655542 278899999998875
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.74 E-value=0.001 Score=58.05 Aligned_cols=162 Identities=9% Similarity=0.003 Sum_probs=100.9
Q ss_pred EEEEecCCCce--eeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEE
Q 018235 158 QLRKVAHQGCV--NRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (359)
Q Consensus 158 ~~~~~~H~~~V--~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (359)
+.+.++|...- ..+.|.. + .++.+.+.+|.|+++|+.+ .+.+..+......+.++
T Consensus 45 Vv~~~phd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~T---------------------gkv~~~~l~~~~FgeGi 101 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLES---------------------AQPVWMERLGNIFAEGL 101 (268)
T ss_dssp EEEEEECCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSC---------------------SSCSEEEECTTCCEEEE
T ss_pred EEEEEcCCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCC---------------------CcEEeEECCCCcceeEE
Confidence 35566787544 6888874 3 7888889999999999987 44444441212223345
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
+.. +..++++.-.++.+.+||..+ .+.+ ..+..- ..-..++ +++..+++| ..++.|.++|..+. +.+.+
T Consensus 102 t~~--g~~Ly~ltw~~~~v~V~D~~T-l~~~---~ti~~~-~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T~-~v~~~ 170 (268)
T 3nok_A 102 ASD--GERLYQLTWTEGLLFTWSGMP-PQRE---RTTRYS-GEGWGLC--YWNGKLVRS-DGGTMLTFHEPDGF-ALVGA 170 (268)
T ss_dssp EEC--SSCEEEEESSSCEEEEEETTT-TEEE---EEEECS-SCCCCEE--EETTEEEEE-CSSSEEEEECTTTC-CEEEE
T ss_pred EEe--CCEEEEEEccCCEEEEEECCc-CcEE---EEEeCC-CceeEEe--cCCCEEEEE-CCCCEEEEEcCCCC-eEEEE
Confidence 554 333555566789999999987 4433 223221 1113344 456635555 45889999999987 55655
Q ss_pred eec--CC---CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 316 FKA--HN---ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 316 ~~~--h~---~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+.. +. ..+|.+.|. +|.+. ...- ....|.+.|+.+|+|
T Consensus 171 I~V~~~g~~v~~lNeLe~~-dG~ly-anvw---~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 171 VQVKLRGQPVELINELECA-NGVIY-ANIW---HSSDVLEIDPATGTV 213 (268)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEE-EEET---TCSEEEEECTTTCBE
T ss_pred EEeCCCCcccccccccEEe-CCEEE-EEEC---CCCeEEEEeCCCCcE
Confidence 532 22 246788888 66533 2221 256788999999876
No 238
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.64 E-value=0.0036 Score=57.89 Aligned_cols=153 Identities=14% Similarity=0.117 Sum_probs=91.5
Q ss_pred eEEEeCCCCcEEEEEe---------CCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCC-------CCceE
Q 018235 170 RIRAMTQNPHICASWA---------DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH-------KDEGY 233 (359)
Q Consensus 170 ~i~~~p~~~~~lat~s---------~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~ 233 (359)
.+.++|++..++++.. .++.|.+||..+ .+.+..+.-. ...-.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t---------------------~~v~~~I~v~~g~r~~~g~~P~ 140 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT---------------------LLPTADIELPDAPRFLVGTYPW 140 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---------------------CCEEEEEEETTCCCCCBSCCGG
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---------------------CeEEEEEECCCccccccCCCCc
Confidence 3999999966655542 467899999987 3444443211 12345
Q ss_pred EEEeCCCCCCeEEEEcC--CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 234 AIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 234 ~l~~sp~~~~~l~sgs~--dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
.+.++|+++ +|+.+.. ++.|.++|+.+ .+.+ ..+.- ... ....|.+...|++.+.||.+.+.++....+
T Consensus 141 ~~a~spDGk-~lyVan~~~~~~VsVID~~t-~~vv---~tI~v--~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~ 211 (386)
T 3sjl_D 141 MTSLTPDGK-TLLFYQFSPAPAVGVVDLEG-KAFK---RMLDV--PDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 211 (386)
T ss_dssp GEEECTTSS-EEEEEECSSSCEEEEEETTT-TEEE---EEEEC--CSE--EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred eEEEcCCCC-EEEEEEcCCCCeEEEEECCC-CcEE---EEEEC--CCc--ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence 799999998 6666543 68999999987 4433 22221 111 223465555888889999999999986313
Q ss_pred ceEEeecC----CCCE-EEEEEc-CCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 312 ALTSFKAH----NADV-NVISWN-RCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 312 ~~~~~~~h----~~~V-~~i~~s-~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.......+ ..++ +...|. ++|+++ |... .+.+.+.|...+.
T Consensus 212 v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~-~vs~----~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 212 PEITHTEVFHPEDEFLINHPAYSQKAGRLV-WPTY----TGKIHQIDLSSGD 258 (386)
T ss_dssp CEEEECCCCSCTTSCBCSCCEEETTTTEEE-EEBT----TSEEEEEECTTSS
T ss_pred EEEeecceeccccccccccceeEcCCCcEE-EEeC----CCEEEEEECCCCc
Confidence 32211111 1122 123554 566443 4333 4568888876553
No 239
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.64 E-value=0.035 Score=51.60 Aligned_cols=168 Identities=8% Similarity=-0.064 Sum_probs=103.8
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
+...+.+..+.|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~-----------------~~~~~~~~~~~~~~p~glavD~~~ 170 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-----------------VSSYDTVISRDIQAPDGLAVDWIH 170 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------------------CCCEEEECSSCSCEEEEEEETTT
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC-----------------CCcceEEEeCCCCCcccEEEEecC
Confidence 345677889999987657777767788898888764100 011222232223345566666655
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeC-CCcEEEEECCCCCCceEEeecCC
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTSFKAHN 320 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~~~~h~ 320 (359)
..++++-...+.|.+.++.. .... ..+...-....+|+++|.+..++.+-.. .+.|...++... .....+...-
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g-~~~~---~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~~~~~l 245 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKG-VKRK---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENI 245 (400)
T ss_dssp TEEEEEETTTTEEEEECTTT-CSEE---EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEEECSSC
T ss_pred CceEEEECCCCeEEEEeCCC-CceE---EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEEEECCC
Confidence 43666666778899998864 2221 1122233457899999976646666543 478998888764 2222223333
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
...+.|++++.+..|.|.... ...|...+..
T Consensus 246 ~~P~glavd~~~~~lY~aD~~---~~~I~~~d~d 276 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSK---LHSISSIDVN 276 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEECC---CCEEEEEeCC
Confidence 568999999988888887542 4566666654
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.64 E-value=0.0037 Score=53.82 Aligned_cols=163 Identities=15% Similarity=0.096 Sum_probs=100.2
Q ss_pred EEEEEecCCCc--eeeEEEeCCCCcEEEEEeCCC--cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCC-c
Q 018235 157 LQLRKVAHQGC--VNRIRAMTQNPHICASWADTG--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-E 231 (359)
Q Consensus 157 ~~~~~~~H~~~--V~~i~~~p~~~~~lat~s~dg--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~ 231 (359)
.+.+.++|... +..+.|.+ + .++.+.+..| .|+.+|+.+ ++.+..+..... .
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~t---------------------gkv~~~~~l~~~~f 66 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLET---------------------GRILQRAEVPPPYF 66 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTT---------------------CCEEEEEECCTTCC
T ss_pred EEEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCC---------------------CCEEEEEeCCCCcc
Confidence 34556688854 66999987 4 6777777654 899999987 444444433222 2
Q ss_pred eEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 232 GYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 232 v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
+.+++.. +..+++..-.++.+.+||..+ .+.+ ..+..... =..++ +++..+++|-+ ++.|.++|..+. +
T Consensus 67 geGi~~~--~~~ly~ltw~~~~v~v~D~~t-l~~~---~ti~~~~~-Gwglt--~dg~~L~vSdg-s~~l~~iDp~t~-~ 135 (243)
T 3mbr_X 67 GAGIVAW--RDRLIQLTWRNHEGFVYDLAT-LTPR---ARFRYPGE-GWALT--SDDSHLYMSDG-TAVIRKLDPDTL-Q 135 (243)
T ss_dssp EEEEEEE--TTEEEEEESSSSEEEEEETTT-TEEE---EEEECSSC-CCEEE--ECSSCEEEECS-SSEEEEECTTTC-C
T ss_pred eeEEEEe--CCEEEEEEeeCCEEEEEECCc-CcEE---EEEeCCCC-ceEEe--eCCCEEEEECC-CCeEEEEeCCCC-e
Confidence 3344443 332555556788999999987 3333 23322111 13444 56665777754 788999999987 5
Q ss_pred ceEEeec--CC---CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 312 ALTSFKA--HN---ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 312 ~~~~~~~--h~---~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.+.++.. +. ..+|-+.|. +|.+. ...- ....|.+.|+.+|+|
T Consensus 136 ~~~~I~V~~~g~~~~~lNeLe~~-~G~ly-anvw---~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 136 QVGSIKVTAGGRPLDNLNELEWV-NGELL-ANVW---LTSRIARIDPASGKV 182 (243)
T ss_dssp EEEEEECEETTEECCCEEEEEEE-TTEEE-EEET---TTTEEEEECTTTCBE
T ss_pred EEEEEEEccCCcccccceeeEEe-CCEEE-EEEC---CCCeEEEEECCCCCE
Confidence 5666532 21 346778877 55533 2221 145788889998876
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.51 E-value=0.00087 Score=65.08 Aligned_cols=122 Identities=8% Similarity=0.027 Sum_probs=81.8
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCC-----c-----ceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCc
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA-----T-----WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH 300 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~-----~-----~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~ 300 (359)
..+++.++|+|...++++-.+.+|.++|+.+.. + .+. ... .-.....-++|+|+| +.+.+.-.|+.
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~--~~v-~vG~gP~h~aF~~dG-~aY~t~~ldsq 353 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV--AEP-ELGLGPLHTAFDGRG-NAYTSLFLDSQ 353 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE--ECC-BCCSCEEEEEECTTS-EEEEEETTTTE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE--EEc-CCCCCcceEEECCCC-eEEEEEecCCc
Confidence 456899999999667777788999999997521 0 010 111 123457789999999 58889999999
Q ss_pred EEEEECCCC---------CCceEEeecCCCCE-----EEEEEcCCCCeEEEEeeecccceE----------EEEEeCcCC
Q 018235 301 IAIWDTRVG---------KSALTSFKAHNADV-----NVISWNRCWLAVCWHLEVMMEHFL----------FMILDCSRG 356 (359)
Q Consensus 301 I~iwD~r~~---------~~~~~~~~~h~~~V-----~~i~~s~~~~~l~~~~~~~~~d~~----------i~iwd~~~g 356 (359)
|.+||+... ...+.++..|-.+- ..+.++|+|++|+.... ++.|.. -.++|++.+
T Consensus 354 V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk-~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 354 VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK-FSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES-CCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC-CCccccccCCCCCCCcceEEEcCCC
Confidence 999998761 14555666554421 12355899999987754 333332 267777655
Q ss_pred c
Q 018235 357 E 357 (359)
Q Consensus 357 ~ 357 (359)
+
T Consensus 433 ~ 433 (595)
T 1fwx_A 433 K 433 (595)
T ss_dssp S
T ss_pred c
Confidence 4
No 242
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.46 E-value=0.00097 Score=62.68 Aligned_cols=137 Identities=7% Similarity=-0.128 Sum_probs=83.9
Q ss_pred CCCcEEEEEeCC----CcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEc--
Q 018235 176 QNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD-- 249 (359)
Q Consensus 176 ~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs-- 249 (359)
++..++++...+ +.|.++|..+ .+.+..+..-..+ .+.++|++. +|+.+.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t---------------------~~vv~~I~vG~~P--gia~SpDgk-~lyVan~~ 138 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGST---------------------GRILGMTDGGFLP--HPVAAEDGS-FFAQASTV 138 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTT---------------------TEEEEEEEECSSC--EEEECTTSS-CEEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCC---------------------CEEEEEEECCCCC--ceEECCCCC-EEEEEecc
Confidence 333455555544 7999999987 4555555433334 899999998 555554
Q ss_pred --------CCCcEEEEecCCCCcceecCcccc--C---CCCCeEEEEecCCCCCEEEEEeC-CCcEEEEECCCCCCceEE
Q 018235 250 --------CNSCIYLWEPASDATWNVDPNPFI--G---HSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 250 --------~dg~I~lwd~~~~~~~~~~~~~~~--~---h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~ 315 (359)
.++.|.++|..+ .+.... ..+. . .......+.|+|+++.++++... +++|.+.|+.+. +.+.+
T Consensus 139 ~~~~~~G~~~~~VsviD~~t-~~vv~~-I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~-kvv~~ 215 (426)
T 3c75_H 139 FERIARGKRTDYVEVFDPVT-FLPIAD-IELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK-TFDRM 215 (426)
T ss_dssp EEETTEEEEEEEEEEECTTT-CCEEEE-EEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT-EEEEE
T ss_pred ccccccCCCCCEEEEEECCC-CcEEEE-EECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC-eEEEE
Confidence 467899999987 333310 1111 0 01234568999999944444433 689999999997 55555
Q ss_pred eecCCC-------CEEEEEEcCCCCeEEEEe
Q 018235 316 FKAHNA-------DVNVISWNRCWLAVCWHL 339 (359)
Q Consensus 316 ~~~h~~-------~V~~i~~s~~~~~l~~~~ 339 (359)
+..-.. .-.-+.++++|+++..+.
T Consensus 216 I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 216 LDVPDCYHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp EECCSEEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred EEcCCceeeccCCCcEEEEEcCCCCEEEEEC
Confidence 542111 011256677777766655
No 243
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.41 E-value=0.042 Score=55.75 Aligned_cols=168 Identities=8% Similarity=-0.062 Sum_probs=102.5
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
+.....+..|.|.+....++.+-...+.|+.+++..... .......+........+|++.+.+
T Consensus 420 ~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~-----------------~~~~~~vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 420 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-----------------VSSYDTVISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------------CEEEECSSCSCCCEEEEETTT
T ss_pred ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCC-----------------CcceeEEEecCCCCcceeeeeecC
Confidence 344567788999986657777777788898888865110 011222232222334456655566
Q ss_pred CCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-CcEEEEECCCCCCceEEeecCC
Q 018235 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSFKAHN 320 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~~~h~ 320 (359)
..++++-...+.|.+.++.. .... ..+...-....+|+++|.+..++.+-... +.|...++... .....+...-
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG-~~~~---~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~~~l 557 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKG-VKRK---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENI 557 (791)
T ss_dssp TEEEEEETTTTEEEEEETTS-SSEE---EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSC
T ss_pred CcEEEEecCCCeEEEEeCCC-CeEE---EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEEEeCCC
Confidence 43666767788999999864 2221 11222345688999999866477776444 78988888754 3222233333
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
...+.|++.+.+..|.|.... ...|...+..
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~---~~~I~~~d~d 588 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSK---LHSISSIDVN 588 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEeCC---CCcEEEEecC
Confidence 568999999888888887542 4556666654
No 244
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.40 E-value=0.043 Score=49.28 Aligned_cols=161 Identities=7% Similarity=-0.110 Sum_probs=98.6
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.....+.|.+.+..++.+-...+.|+.+++... ......+........+|++.+.+..++
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~--------------------~~~~~~~~~~l~~p~glavd~~~g~ly 94 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--------------------ESVQNVVVSGLLSPDGLACDWLGEKLY 94 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSS--------------------SCCCEEEEECCSCCCEEEEETTTTEEE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCC--------------------CceEEEEcCCCCCccEEEEEcCCCeEE
Confidence 356688999866577777777889999988761 111112222122334566655444356
Q ss_pred EEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEe-CCCcEEEEECCCCCCceEEeecCCCCEE
Q 018235 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-VDGHIAIWDTRVGKSALTSFKAHNADVN 324 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-~Dg~I~iwD~r~~~~~~~~~~~h~~~V~ 324 (359)
++-...+.|.++++.. .... ..+........+|++.|.+..++.+-. ..+.|...++... .....+...-...+
T Consensus 95 ~~d~~~~~I~~~~~dG-~~~~---~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 95 WTDSETNRIEVSNLDG-SLRK---VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPN 169 (318)
T ss_dssp EEETTTTEEEEEETTS-CSCE---EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEE
T ss_pred EEECCCCEEEEEECCC-CcEE---EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCcc
Confidence 6666678899999864 2211 112233456789999997664666653 3678888887753 22222222234578
Q ss_pred EEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 325 VISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 325 ~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.|+|++++..|.|.... .+.|..++..
T Consensus 170 glavd~~~~~lY~aD~~---~~~I~~~d~d 196 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAK---LNFIHKSNLD 196 (318)
T ss_dssp EEEEETTTTEEEEEETT---TTEEEEEETT
T ss_pred EEEEeccCCEEEEEECC---CCEEEEEcCC
Confidence 99999988877777542 4567776654
No 245
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.37 E-value=0.015 Score=58.80 Aligned_cols=225 Identities=11% Similarity=-0.033 Sum_probs=114.3
Q ss_pred CceeeeChhHhhhhhcccccCcceeEEEE-eccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCCCCC
Q 018235 47 GEELQCDPTAYNSLHAFHIGWPCLSFDIV-RDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNK 125 (359)
Q Consensus 47 ~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~-pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~~~~ 125 (359)
.+++..|+....--|.+. ---++.|. ||+ .+++.+....+.+...|+|+++..- .
T Consensus 157 ~~~vlld~n~~a~~~~~~---~~~~~~~S~PDG-----------~~lAy~~~~~G~~~~~l~v~dl~~g----~------ 212 (751)
T 2xe4_A 157 AEEVIIDVNQVAEGKAFC---DVMEVKPAPPEH-----------DLVAFSVDMSGNEVYTIEFKRISDP----S------ 212 (751)
T ss_dssp TCEEEEEHHHHTTTCSCC---EEEEEEECTTTT-----------CEEEEEEESSSSSCEEEEEEETTCT----T------
T ss_pred CCEEEechhHhccCCCeE---EEeeeEecCCCC-----------CEEEEEEeCCCCceEEEEEEECCCC----C------
Confidence 468888886553333320 12356788 886 3566666655555667888877310 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCC----CcEEEEECCCCccc
Q 018235 126 PSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNA 201 (359)
Q Consensus 126 ~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~ 201 (359)
+. -...+ ......+.|+|++..++++.... ..|+++++....
T Consensus 213 ----------------------~~---l~~~~-------~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~-- 258 (751)
T 2xe4_A 213 ----------------------QT---IADKV-------SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQ-- 258 (751)
T ss_dssp ----------------------CC---CCCCE-------EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCG--
T ss_pred ----------------------Ee---CCccc-------cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCc--
Confidence 00 00011 11235688999996666664432 257777776511
Q ss_pred cccccccccCCCCCCCCCCCcEEecC-CCCceEEEEeCCCCCCeEEEEc-C--CCcEEEEecCCCC-cc--eecCccccC
Q 018235 202 LAESETIVGQGAPQVSNQSPLVKFGG-HKDEGYAIDWNPITTGRLVTGD-C--NSCIYLWEPASDA-TW--NVDPNPFIG 274 (359)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~sgs-~--dg~I~lwd~~~~~-~~--~~~~~~~~~ 274 (359)
.....++.. ......++.|||++. +|+..+ . ...|+++|+..+. .+ . .....
T Consensus 259 -----------------~~~~lv~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~~---~l~~~ 317 (751)
T 2xe4_A 259 -----------------SEDVCLYEEHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLDLRKGNAHNTLE---IVRPR 317 (751)
T ss_dssp -----------------GGCEEEEECCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEESSSCTTCCCEE---ESSCC
T ss_pred -----------------hhcEEEEecCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEECCCCCCCceeE---EeecC
Confidence 112233332 223456789999998 554433 2 3357788886531 22 1 11223
Q ss_pred CCCCeEEEEecCCCCCEEEEEeCC----CcEEEEECCCCCCceEE-eecCCCCEEEEEEcCCCCeEEEEeeecccceEEE
Q 018235 275 HSASVEDLQWSPTEPDVFASCSVD----GHIAIWDTRVGKSALTS-FKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFM 349 (359)
Q Consensus 275 h~~~V~~v~~sp~~~~~las~s~D----g~I~iwD~r~~~~~~~~-~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~ 349 (359)
.......+.|+..+. +++....+ ..|..+|+.++ ..... +..|...+..-.|.+.+..|++..... ....|.
T Consensus 318 ~~~~~~s~~~~~g~~-l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~-g~~~l~ 394 (751)
T 2xe4_A 318 EKGVRYDVQMHGTSH-LVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA-GLTRIW 394 (751)
T ss_dssp CTTCCEEEEEETTTE-EEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEECSSEEEEEEEET-TEEEEE
T ss_pred CCCceEEEeeeeCCE-EEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEECCEEEEEEEeC-CEEEEE
Confidence 345556666654443 55554443 35667777642 12223 333444433233344455665554421 123355
Q ss_pred EEeC
Q 018235 350 ILDC 353 (359)
Q Consensus 350 iwd~ 353 (359)
+++.
T Consensus 395 ~~dl 398 (751)
T 2xe4_A 395 TMMA 398 (751)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5553
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.36 E-value=0.0097 Score=53.25 Aligned_cols=177 Identities=11% Similarity=-0.050 Sum_probs=93.8
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCc-cccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC-CCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHL-NALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP-ITTG 243 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~ 243 (359)
.....+++.+++ .++.++..++.|..|+..... ..+........ ....................+|++.+ .+
T Consensus 19 ~~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-- 92 (322)
T 2fp8_A 19 YAPNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWN---KAFCENSTDAEKRPLCGRTYDISYNLQNN-- 92 (322)
T ss_dssp SCCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEEEEEESCTTCC---HHHHTTCCCGGGHHHHCCEEEEEEETTTT--
T ss_pred CCceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceEEEeccccccc---ccccccccchhccccCCCCceEEEcCCCC--
Confidence 345677888887 656667888999999876511 00000000000 00000000000000012467899987 54
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccC-CCCCeEEEEecC-CCCCEEEEEeC-----------------CCcEEEE
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSP-TEPDVFASCSV-----------------DGHIAIW 304 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp-~~~~~las~s~-----------------Dg~I~iw 304 (359)
.|+.++..+.|..+|... +..........+ .....+++++.| ++. ++++-.. ++.|..|
T Consensus 93 ~l~v~d~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 93 QLYIVDCYYHLSVVGSEG-GHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp EEEEEETTTEEEEECTTC-EECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred cEEEEECCCCEEEEeCCC-CEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEE
Confidence 455555555688888754 221100011111 123578999999 887 7766533 3678888
Q ss_pred ECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 305 DTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
|..++ . +..+...-...+.|+|++++..+.+.... .+.|..++...
T Consensus 171 d~~~~-~-~~~~~~~~~~p~gia~~~dg~~lyv~d~~---~~~I~~~~~~~ 216 (322)
T 2fp8_A 171 DPSTK-E-TTLLLKELHVPGGAEVSADSSFVLVAEFL---SHQIVKYWLEG 216 (322)
T ss_dssp ETTTT-E-EEEEEEEESCCCEEEECTTSSEEEEEEGG---GTEEEEEESSS
T ss_pred eCCCC-E-EEEeccCCccCcceEECCCCCEEEEEeCC---CCeEEEEECCC
Confidence 88764 2 22222122345789999999866555332 45677776653
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.34 E-value=0.0087 Score=60.54 Aligned_cols=162 Identities=9% Similarity=0.030 Sum_probs=89.7
Q ss_pred ceeeEEEe-CCCCcEEEEEeCCC----cEEEEECCCCccccccccccccCCCCCCCCCCCc-EEecCCCCceEEEEeCCC
Q 018235 167 CVNRIRAM-TQNPHICASWADTG----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL-VKFGGHKDEGYAIDWNPI 240 (359)
Q Consensus 167 ~V~~i~~~-p~~~~~lat~s~dg----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~sp~ 240 (359)
.+...+|+ |+|..++.+...+| +|+++|+.... ..+ ..+.. ...++.|+|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~--------------------~~l~~~~~~---~~~~~~WspD 231 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS--------------------QTIADKVSG---TNGEIVWGPD 231 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT--------------------CCCCCCEEE---ECSCCEECSS
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC--------------------EeCCccccC---ceeeEEEecC
Confidence 67889999 99955555555444 49999998720 110 00111 1236899999
Q ss_pred CCCeEEEEcCC-----CcEEEEecCCCCcceecCcccc-CCCCCeEEEEecCCCCCEEEEEeC--CCcEEEEECCCCCCc
Q 018235 241 TTGRLVTGDCN-----SCIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSV--DGHIAIWDTRVGKSA 312 (359)
Q Consensus 241 ~~~~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~--Dg~I~iwD~r~~~~~ 312 (359)
+. .|+....+ ..|+++++.++.... ...+. .+......+.|||++..++++... ...|.++|+.++...
T Consensus 232 g~-~l~y~~~d~~~~~~~v~~~~lgt~~~~~--~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~ 308 (751)
T 2xe4_A 232 HT-SLFYVTKDETLRENKVWRHVMGKLQSED--VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH 308 (751)
T ss_dssp TT-EEEEEEECTTCCEEEEEEEETTSCGGGC--EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC
T ss_pred CC-EEEEEEECCCCCCCEEEEEECCCCchhc--EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC
Confidence 98 44444433 257777775532110 01122 223446688999999955555433 345888898875222
Q ss_pred e--EEe-ecCCCCEEEEEEcCCCCeEEEEeeec-ccceEEEEEeCcC
Q 018235 313 L--TSF-KAHNADVNVISWNRCWLAVCWHLEVM-MEHFLFMILDCSR 355 (359)
Q Consensus 313 ~--~~~-~~h~~~V~~i~~s~~~~~l~~~~~~~-~~d~~i~iwd~~~ 355 (359)
. ..+ ........++.|+. +..|++..... .....|..++..+
T Consensus 309 ~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 309 NTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 3 334 33445566677665 44444443321 2234566666543
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.18 E-value=0.13 Score=47.47 Aligned_cols=160 Identities=10% Similarity=-0.100 Sum_probs=95.1
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.....+++.+.+..++++-...+.|.+.++.. ......+......-.+|++.|.+..++
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg---------------------~~~~~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG---------------------AHRKVLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTS---------------------CSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC---------------------CceEEeecCCCCCCcEEEEEcCCCeEE
Confidence 34567888876557777777777888877765 111222323334567899998765344
Q ss_pred EEEcCC-CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEE
Q 018235 246 VTGDCN-SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324 (359)
Q Consensus 246 ~sgs~d-g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~ 324 (359)
++-... +.|...++....... .....-...+.|+|+|.+..++++-+..+.|..+|+... .....+........
T Consensus 218 ~td~~~~~~I~r~~~dG~~~~~----~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~P~ 292 (386)
T 3v65_B 218 WTDWGNTPRIEASSMDGSGRRI----IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQGLPHPF 292 (386)
T ss_dssp EEECSSSCEEEEEETTSCSCEE----EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-SCEEEECSSCSSEE
T ss_pred EeccCCCCEEEEEeCCCCCcEE----EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-eeEEEEECCCCCce
Confidence 544444 678888875421111 111223457899999877768888888899999998754 22222332334466
Q ss_pred EEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 325 VISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 325 ~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
.|++. +..+.|.... .+.|..++..+|
T Consensus 293 giav~--~~~ly~td~~---~~~V~~~~~~~G 319 (386)
T 3v65_B 293 AITVF--EDSLYWTDWH---TKSINSANKFTG 319 (386)
T ss_dssp EEEEE--TTEEEEEETT---TTEEEEEETTTC
T ss_pred EEEEE--CCEEEEeeCC---CCeEEEEECCCC
Confidence 77772 3455555432 455666654343
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.16 E-value=0.12 Score=46.93 Aligned_cols=159 Identities=10% Similarity=-0.090 Sum_probs=96.7
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.....+++.+.+.+++.+-...+.|.+.++... .....+......-.+|++.|.+..++
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---------------------~~~~l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---------------------HRKVLLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---------------------ceEEEEeCCCCCcceEEEecCcCeEE
Confidence 345778888766577788777889999988751 11222223334567899998765355
Q ss_pred EEEcCC-CcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCE
Q 018235 246 VTGDCN-SCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (359)
Q Consensus 246 ~sgs~d-g~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (359)
++-... +.|...++.. ... ..+ ...-...+.|+|+|.+..++.+-+..+.|..+|+... .....+...-...
T Consensus 175 ~td~~~~~~I~r~~~dG-~~~----~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~-~~~~~~~~~~~~P 248 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDG-SGR----RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQGLPHP 248 (349)
T ss_dssp EEECSSSCEEEEEETTS-CSC----EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSE
T ss_pred EeccCCCCEEEEEeCCC-CCc----EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC-ceEEEEeCCCCCc
Confidence 555445 7788888754 221 112 1223457899999977768888888899999998754 2222232233445
Q ss_pred EEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 324 NVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 324 ~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
..|++. +..+.|.... .+.|..++..+|
T Consensus 249 ~giav~--~~~ly~td~~---~~~V~~~~~~~G 276 (349)
T 3v64_C 249 FAITVF--EDSLYWTDWH---TKSINSANKFTG 276 (349)
T ss_dssp EEEEEE--TTEEEEEETT---TTEEEEEETTTC
T ss_pred eEEEEE--CCEEEEecCC---CCeEEEEEccCC
Confidence 677773 3455555332 444555553333
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.16 E-value=0.0055 Score=61.22 Aligned_cols=54 Identities=19% Similarity=0.129 Sum_probs=39.5
Q ss_pred CcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 299 GHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 299 g~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
|.|..||+.++ +.+..+. +..+++...+...+.+++.+.. ++.+++||..+|++
T Consensus 457 g~l~A~D~~tG-~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~----dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQ-KAAWSVE-HVSPWNGGTLTTAGNVVFQGTA----DGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTT-EEEEEEE-ESSSCCCCEEEETTTEEEEECT----TSEEEEEETTTCCE
T ss_pred cEEEEEeCCCC-cEEeecC-CCCCCcCcceEeCCCEEEEECC----CCcEEEEECCCCce
Confidence 78999999998 6666664 3344555556667777776643 88899999998875
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.09 E-value=0.012 Score=59.03 Aligned_cols=55 Identities=15% Similarity=0.011 Sum_probs=39.4
Q ss_pred CCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+|.|+.||+.++ +.+..+..+. +++...+...+.+++.+.. ++.|+.||..+|++
T Consensus 454 ~g~l~A~D~~tG-~~~W~~~~~~-~~~~g~~~tagglvf~gt~----dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQ-QAAWEVPYVT-IFNGGTLSTAGNLVFEGSA----DGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTT-EEEEEEEESS-SCCCCEEEETTTEEEEECT----TSEEEEEETTTCCE
T ss_pred ceeEEEEECCCC-CeEeEccCCC-CccCccceECCCEEEEECC----CCcEEEEECCCCcc
Confidence 378999999998 6666665443 3343455666777766644 88999999999875
No 252
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.08 E-value=0.15 Score=46.12 Aligned_cols=164 Identities=10% Similarity=0.052 Sum_probs=97.6
Q ss_pred CceeeEEEeCCC----C---cEEEEEeC--CCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC------CC-
Q 018235 166 GCVNRIRAMTQN----P---HICASWAD--TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG------HK- 229 (359)
Q Consensus 166 ~~V~~i~~~p~~----~---~~lat~s~--dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~- 229 (359)
+.+|.+..-|.- . ..+|+... +++|.+|++.... .++..+.. ..
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~--------------------~~l~~i~~~~~pv~t~~ 127 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN--------------------GTLQSMTDPDHPIATAI 127 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT--------------------CCEEECSCTTSCEECCC
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC--------------------CceeeccccccCcCCCC
Confidence 778888877621 1 23455545 6899999885411 12222211 11
Q ss_pred CceEEEEe--CCCC-CCeEEEEcCCCcEEEEecCCC--Ccce-ecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEE
Q 018235 230 DEGYAIDW--NPIT-TGRLVTGDCNSCIYLWEPASD--ATWN-VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (359)
Q Consensus 230 ~~v~~l~~--sp~~-~~~l~sgs~dg~I~lwd~~~~--~~~~-~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (359)
..+++|+. +|.. ..+++....+|.+..|++... +... ...+.|. -.+.++.+...+... .|..+-.+.-|..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g-~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYG-RLYIAEEDEAIWK 205 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTT-EEEEEETTTEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCC-eEEEecccceEEE
Confidence 46777777 7753 335777788899999988431 1111 1113443 345788999998777 7777888766777
Q ss_pred EECCCCC----CceEEee-c-CCCCEEEEEE--cCCCC-eEEEEeeecccceEEEEEeCc
Q 018235 304 WDTRVGK----SALTSFK-A-HNADVNVISW--NRCWL-AVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 304 wD~r~~~----~~~~~~~-~-h~~~V~~i~~--s~~~~-~l~~~~~~~~~d~~i~iwd~~ 354 (359)
+|.+-.. ..+..+. . ....+-.|+. .+++. +|+.++. .+..+.+|+..
T Consensus 206 ~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ---G~~s~~Vydr~ 262 (355)
T 3amr_A 206 FSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ---GNSSYAIYDRQ 262 (355)
T ss_dssp EECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG---GGTEEEEEESS
T ss_pred EeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC---CCCEEEEEECC
Confidence 7755221 2233331 2 2357888887 45555 6666654 26778888875
No 253
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.02 E-value=0.02 Score=53.79 Aligned_cols=154 Identities=8% Similarity=0.078 Sum_probs=88.5
Q ss_pred eeeEEEeCC-CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEE
Q 018235 168 VNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (359)
Q Consensus 168 V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 246 (359)
...+++.|. +..++++-.. +.|+.+|+.. ..+..+........+|+|++++. +|+
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~----------------------~~v~~~~~~~~~P~~ia~d~~G~-~ly 194 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEK----------------------EYVSTVYSGLSKVRTICWTHEAD-SMI 194 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-EEEEEEETTT----------------------TEEEEEECCCSCEEEEEECTTSS-EEE
T ss_pred CCEEEECCCCCCeEEEEeCC-CcEEEEECCC----------------------CEEEEEecCCCCcceEEEeCCCC-EEE
Confidence 457788873 3255555333 7788888765 22333333445678999999987 555
Q ss_pred EEcC-CC----cEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEee-cCC
Q 018235 247 TGDC-NS----CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK-AHN 320 (359)
Q Consensus 247 sgs~-dg----~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~-~h~ 320 (359)
.++. .+ .+...+. . +.+.. ...+. ......+++++|.+..++++-..++.|..++.... ....... ...
T Consensus 195 vad~~~~~~~~~v~~~~~-~-g~~~~-~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~-~~~~~~~~~~~ 269 (430)
T 3tc9_A 195 ITNDQNNNDRPNNYILTR-E-SGFKV-ITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ-ETTPLFTIQDS 269 (430)
T ss_dssp EEECCSCTTSEEEEEEEG-G-GTSCS-EEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT-EEEEEEECSSS
T ss_pred EEeCCCCcccceEEEEeC-C-Cceee-eeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-cEEEEEEcCCC
Confidence 5543 22 2333333 2 22210 01111 12345678899943338888888899999998865 2211111 122
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
...+.|+|+|++.+|.+.... .+.|..++.
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~---~~~I~~~~~ 299 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVN---QHYILRSDY 299 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETT---TTEEEEEEE
T ss_pred CcceeEEEcCCCCEEEEEECC---CCEEEEEeC
Confidence 456889999999965555332 455666553
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.92 E-value=0.036 Score=49.08 Aligned_cols=148 Identities=11% Similarity=-0.019 Sum_probs=82.5
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
+...+.++...+++ . +..++.++.|..||... ..+..+......+.++...+++.
T Consensus 135 ~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~g----------------------~~~~~~~~~~~~~~~~~~d~~g~- 189 (330)
T 3hxj_A 135 KKAIYATPIVSEDG-T-IYVGSNDNYLYAINPDG----------------------TEKWRFKTNDAITSAASIGKDGT- 189 (330)
T ss_dssp SSCCCSCCEECTTS-C-EEEECTTSEEEEECTTS----------------------CEEEEEECSSCCCSCCEECTTCC-
T ss_pred CCceeeeeEEcCCC-E-EEEEcCCCEEEEECCCC----------------------CEeEEEecCCCceeeeEEcCCCE-
Confidence 44455666666666 3 44456778888888762 22223333333455666666654
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCE
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (359)
|..++ +.|..+| .+ +... ..+......+.++...+++. +..++.++.|..+|. ++ ..+..+......+
T Consensus 190 -l~v~t--~~l~~~d-~~-g~~~---~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~-~g-~~~~~~~~~~~~~ 257 (330)
T 3hxj_A 190 -IYFGS--DKVYAIN-PD-GTEK---WNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINP-DG-TEKWRFKTGKRIE 257 (330)
T ss_dssp -EEEES--SSEEEEC-TT-SCEE---EEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECT-TS-CEEEEEECSSCCC
T ss_pred -EEEEe--CEEEEEC-CC-CcEE---EEEccCCcceeceEECCCCe--EEEEcCCCeEEEECC-CC-CEeEEeeCCCCcc
Confidence 55555 7888999 44 3322 12223345677788888875 444666777888874 33 4455554444434
Q ss_pred EEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 324 NVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 324 ~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
.++...+++.+.+.+ . ++.|..++.
T Consensus 258 ~~~~~~~~g~l~v~t-~----~ggl~~~d~ 282 (330)
T 3hxj_A 258 SSPVIGNTDTIYFGS-Y----DGHLYAINP 282 (330)
T ss_dssp SCCEECTTSCEEEEC-T----TCEEEEECT
T ss_pred ccceEcCCCeEEEec-C----CCCEEEECC
Confidence 455566566544332 2 334555564
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.92 E-value=0.17 Score=43.73 Aligned_cols=165 Identities=8% Similarity=0.014 Sum_probs=98.0
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe--cCCCCceEEEEeCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF--GGHKDEGYAIDWNPI 240 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~ 240 (359)
+-.+.+..++++|++..++|+...++.|...|... +.+..+ .+. ....+|++.+.
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g----------------------~v~~~i~l~g~-~D~EGIa~~~~ 80 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG----------------------DLIRTIPLDFV-KDLETIEYIGD 80 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC----------------------CEEEEEECSSC-SSEEEEEECST
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC----------------------CEEEEEecCCC-CChHHeEEeCC
Confidence 45578999999998767777778888988888764 222222 332 35668888887
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCc-ceecCccc----cCCCCCeEEEEecCCCCCEEEEEeCCC-cEEEEECCCCCCceE
Q 018235 241 TTGRLVTGDCNSCIYLWEPASDAT-WNVDPNPF----IGHSASVEDLQWSPTEPDVFASCSVDG-HIAIWDTRVGKSALT 314 (359)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~-~~~~~~~~----~~h~~~V~~v~~sp~~~~~las~s~Dg-~I~iwD~r~~~~~~~ 314 (359)
+. ++++.-.++.+.++++...+. +.+....+ .......+.|+|+|.+..+++++-.+. .|..|+-......+.
T Consensus 81 g~-~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 81 NQ-FVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp TE-EEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred CE-EEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 75 667766778899998866443 11111111 123456899999999874555554443 445555111111222
Q ss_pred Eee-------cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 315 SFK-------AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 315 ~~~-------~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.+. .+...+..|+++|....+..-.. +...|..+|..
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~---~s~~L~~~d~~ 203 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSH---ESRALQEVTLV 203 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEET---TTTEEEEECTT
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEEC---CCCeEEEEcCC
Confidence 221 13446789999997643333222 14555555543
No 256
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.88 E-value=0.03 Score=54.36 Aligned_cols=74 Identities=7% Similarity=-0.026 Sum_probs=52.5
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC----------CceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceE
Q 018235 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK----------SALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFL 347 (359)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~----------~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~ 347 (359)
...++.++|+|+.+++++..+.+|.++|+.+.. ..+..-..-......++|+++| .+...+. .+..
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~---ldsq 353 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLF---LDSQ 353 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEET---TTTE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEe---cCCc
Confidence 445789999999888888899999999999641 0122212234568899999999 5444443 3777
Q ss_pred EEEEeCcC
Q 018235 348 FMILDCSR 355 (359)
Q Consensus 348 i~iwd~~~ 355 (359)
+..|+...
T Consensus 354 V~kwdi~~ 361 (595)
T 1fwx_A 354 VVKWNIED 361 (595)
T ss_dssp EEEEEHHH
T ss_pred EEEEEhhH
Confidence 88898754
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.87 E-value=0.22 Score=44.34 Aligned_cols=159 Identities=12% Similarity=-0.042 Sum_probs=96.3
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.....+++.+.+.+++++-...+.|.++++... .....+........+++..|.+..++
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~---------------------~~~~~~~~~~~~P~~iavdp~~g~ly 135 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---------------------KRKTLFRENGSKPRAIVVDPVHGFMY 135 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---------------------SEEEEEECTTCCEEEEEEETTTTEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC---------------------ceEEEEECCCCCcceEEeCCCCCEEE
Confidence 456788888755477777778899999988651 11112222234567899998665244
Q ss_pred EEEcCC-CcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe-ec--CC
Q 018235 246 VTGDCN-SCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF-KA--HN 320 (359)
Q Consensus 246 ~sgs~d-g~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~-~~--h~ 320 (359)
++.... +.|...++.. ... ..+ ...-...+.|+|+|.+..++.+-+..+.|..+|+... . ...+ .. .-
T Consensus 136 ~~d~~~~~~I~~~~~dG--~~~---~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~-~~~~~~~~~~~ 208 (316)
T 1ijq_A 136 WTDWGTPAKIKKGGLNG--VDI---YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-N-RKTILEDEKRL 208 (316)
T ss_dssp EEECSSSCEEEEEETTS--CCE---EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-S-CEEEEECTTTT
T ss_pred EEccCCCCeEEEEcCCC--CCe---EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-c-eEEEeecCCcc
Confidence 444333 6788888753 211 112 1223467899999987757777778889999999753 2 2222 21 22
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.....|++. +..+.|.... .+.|..++..+|.
T Consensus 209 ~~P~giav~--~~~ly~~d~~---~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 209 AHPFSLAVF--EDKVFWTDII---NEAIFSANRLTGS 240 (316)
T ss_dssp SSEEEEEEE--TTEEEEEETT---TTEEEEEETTTCC
T ss_pred CCcEEEEEE--CCEEEEEECC---CCeEEEEeCCCCc
Confidence 345677774 3455555432 4556666655443
No 258
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.83 E-value=0.036 Score=49.09 Aligned_cols=149 Identities=11% Similarity=-0.033 Sum_probs=87.7
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 243 (359)
....+.++...+++ .++++ + +.|..+| .. ...+..+......+.++...+++
T Consensus 175 ~~~~~~~~~~d~~g-~l~v~-t--~~l~~~d-~~---------------------g~~~~~~~~~~~~~~~~~~~~~g-- 226 (330)
T 3hxj_A 175 NDAITSAASIGKDG-TIYFG-S--DKVYAIN-PD---------------------GTEKWNFYAGYWTVTRPAISEDG-- 226 (330)
T ss_dssp SSCCCSCCEECTTC-CEEEE-S--SSEEEEC-TT---------------------SCEEEEECCSSCCCSCCEECTTS--
T ss_pred CCCceeeeEEcCCC-EEEEE-e--CEEEEEC-CC---------------------CcEEEEEccCCcceeceEECCCC--
Confidence 34456666666666 44443 3 7888888 33 33344444444557777777776
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCE
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (359)
.|..++.++.|..++.. +... ..+......+..+...+++. |..++.+|.|..+|. ++ ..+..+......+
T Consensus 227 ~l~v~t~~~gl~~~~~~--g~~~---~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g-~~~~~~~~~~~~~ 297 (330)
T 3hxj_A 227 TIYVTSLDGHLYAINPD--GTEK---WRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DG-TEKWNFETGSWII 297 (330)
T ss_dssp CEEEEETTTEEEEECTT--SCEE---EEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TS-CEEEEEECSSCCC
T ss_pred eEEEEcCCCeEEEECCC--CCEe---EEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CC-cEEEEEEcCCccc
Confidence 46666667888888753 2222 12222223333455555664 666778888999995 44 5555555455567
Q ss_pred EEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 324 NVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 324 ~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.++...+++.+.+.+ . ++.+.+....
T Consensus 298 ~~~~~d~~g~l~~gt-~----~G~~~~~~~~ 323 (330)
T 3hxj_A 298 ATPVIDENGTIYFGT-R----NGKFYALFNL 323 (330)
T ss_dssp SCCEECTTCCEEEEC-T----TSCEEEEEC-
T ss_pred cceEEcCCCEEEEEc-C----CCeEEEEecc
Confidence 777777778755533 3 5566665443
No 259
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.79 E-value=0.036 Score=52.87 Aligned_cols=158 Identities=13% Similarity=0.102 Sum_probs=92.2
Q ss_pred eeeEEEeCC-CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCC----CCceEEEEe-----
Q 018235 168 VNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH----KDEGYAIDW----- 237 (359)
Q Consensus 168 V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~----- 237 (359)
...++|.|. ..+++++....+.|++.|+.. ..+.++..- ......|+|
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~----------------------~~v~~l~~~~~~~~~~p~~ia~~~~~~ 198 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKN----------------------RMLSSPLNINTIPTNRIRSIAFNKKIE 198 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTT----------------------TEEEEEECCTTSSCSBEEEEEECCCBT
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCC----------------------CEEEEEEccCccccCCCcEEEEeeccc
Confidence 567889984 436777766667788888876 222232211 225789999
Q ss_pred --CCCCCCeEEEEcCCC-c------EEEEecCCCCccee-c-CccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 238 --NPITTGRLVTGDCNS-C------IYLWEPASDATWNV-D-PNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 238 --sp~~~~~l~sgs~dg-~------I~lwd~~~~~~~~~-~-~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
++++. .|+.++..+ . |.+.+....+.+.. . .+.+.. -.....++.+|.+..++++...++.|..+|+
T Consensus 199 ~~d~~G~-~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 199 GYADEAE-YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp TTBCTTC-EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred ccCCCCC-EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 99987 555554443 2 55665333123320 0 011111 1233567889976668888889999999998
Q ss_pred C-------CCCC-----c-----eEEe--ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEe
Q 018235 307 R-------VGKS-----A-----LTSF--KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILD 352 (359)
Q Consensus 307 r-------~~~~-----~-----~~~~--~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd 352 (359)
. ++.. + ...+ .........|+|+|++..|...... .+.|+.++
T Consensus 277 ~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~---~h~I~kid 338 (496)
T 3kya_A 277 VDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN---NHYFMRSD 338 (496)
T ss_dssp HHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT---TTEEEEEE
T ss_pred ccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC---CCEEEEEe
Confidence 7 4411 0 1122 1223446789999999954443321 55566643
No 260
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.77 E-value=0.0067 Score=60.62 Aligned_cols=80 Identities=10% Similarity=0.078 Sum_probs=52.2
Q ss_pred CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC-CCCEEEEEEcC
Q 018235 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH-NADVNVISWNR 330 (359)
Q Consensus 252 g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h-~~~V~~i~~s~ 330 (359)
|.|..||+.+ ++.+ ..+. +...+....+...+. +++.++.||.+++||.+++ +.+.++... .....-+.|..
T Consensus 457 g~l~A~D~~t-G~~~---W~~~-~~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D~~tG-~~lw~~~~~~~~~~~p~~y~~ 529 (677)
T 1kb0_A 457 GRLLAWDPVA-QKAA---WSVE-HVSPWNGGTLTTAGN-VVFQGTADGRLVAYHAATG-EKLWEAPTGTGVVAAPSTYMV 529 (677)
T ss_dssp EEEEEEETTT-TEEE---EEEE-ESSSCCCCEEEETTT-EEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEEEE
T ss_pred cEEEEEeCCC-CcEE---eecC-CCCCCcCcceEeCCC-EEEEECCCCcEEEEECCCC-ceeeeeeCCCCcccCCEEEEe
Confidence 7799999987 4422 1121 223344445666676 7777899999999999998 777777533 22334456777
Q ss_pred CCCeEEEE
Q 018235 331 CWLAVCWH 338 (359)
Q Consensus 331 ~~~~l~~~ 338 (359)
+|+.++..
T Consensus 530 ~G~~~v~~ 537 (677)
T 1kb0_A 530 DGRQYVSV 537 (677)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 88755443
No 261
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.62 E-value=0.35 Score=43.16 Aligned_cols=159 Identities=11% Similarity=-0.034 Sum_probs=97.4
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
.....+++.+.+.+++.+-...+.|.++++... .....+......-.+|++.|.+. .|
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---------------------~~~~l~~~~~~~P~giavdp~~g-~l 136 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---------------------LRKVLFWQELDQPRAIALDPSSG-FM 136 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECSSCSSEEEEEEEGGGT-EE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCC---------------------cEEEEEeCCCCCccEEEEeCCCC-EE
Confidence 456778888765578787777889999998751 11122223334567888888764 44
Q ss_pred EEEc--CCCcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCC
Q 018235 246 VTGD--CNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (359)
Q Consensus 246 ~sgs--~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (359)
+..+ ..+.|...++.- .. . ..+ ...-...+.|+|+|.+..++.+-+..+.|..+|+... .....+......
T Consensus 137 y~td~~~~~~I~r~~~dG-~~-~---~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~ 210 (318)
T 3sov_A 137 YWTDWGEVPKIERAGMDG-SS-R---FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVKGSLPH 210 (318)
T ss_dssp EEEECSSSCEEEEEETTS-CS-C---EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSCCSC
T ss_pred EEEecCCCCEEEEEEcCC-CC-e---EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEecCCCCC
Confidence 4444 256788887753 21 1 112 1223456899999977757788788899999998754 222222223344
Q ss_pred EEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 323 VNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 323 V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
...|++. +..+.|.... .+.|..++..+|.
T Consensus 211 P~glav~--~~~lywtd~~---~~~V~~~~~~~G~ 240 (318)
T 3sov_A 211 PFALTLF--EDILYWTDWS---THSILACNKYTGE 240 (318)
T ss_dssp EEEEEEE--TTEEEEEETT---TTEEEEEETTTCC
T ss_pred ceEEEEe--CCEEEEEecC---CCeEEEEECCCCC
Confidence 5667764 4456665432 4567777765554
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.59 E-value=0.35 Score=42.63 Aligned_cols=164 Identities=8% Similarity=0.015 Sum_probs=93.5
Q ss_pred EEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEe
Q 018235 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (359)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (359)
....++.......++|.+++ .++++-...+.|+.||... .....+. -.....+|++
T Consensus 24 ~~~~~p~~~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g----------------------~~~~~~~-~~~~p~gia~ 79 (306)
T 2p4o_A 24 IITSFPVNTFLENLASAPDG-TIFVTNHEVGEIVSITPDG----------------------NQQIHAT-VEGKVSGLAF 79 (306)
T ss_dssp EEEEECTTCCEEEEEECTTS-CEEEEETTTTEEEEECTTC----------------------CEEEEEE-CSSEEEEEEE
T ss_pred EeEeCCCCCCcceEEECCCC-CEEEEeCCCCeEEEECCCC----------------------ceEEEEe-CCCCceeEEE
Confidence 33444444678899999988 6887777889999998765 1111121 1235789999
Q ss_pred CCCCCCeEEEEcC-CC-cEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 238 NPITTGRLVTGDC-NS-CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 238 sp~~~~~l~sgs~-dg-~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
.+++. ++++... ++ .|..++..+ +.... ...+ ........++..+.+. ++++...++.|.++|...+...+..
T Consensus 80 ~~dG~-l~vad~~~~~~~v~~~d~~~-g~~~~-~~~~-~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~ 154 (306)
T 2p4o_A 80 TSNGD-LVATGWNADSIPVVSLVKSD-GTVET-LLTL-PDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWL 154 (306)
T ss_dssp CTTSC-EEEEEECTTSCEEEEEECTT-SCEEE-EEEC-TTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCCc-EEEEeccCCcceEEEEcCCC-CeEEE-EEeC-CCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEE
Confidence 99987 6555433 22 466667655 33221 0111 1122334555555444 6666667889999998753111211
Q ss_pred ee---------cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 316 FK---------AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 316 ~~---------~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
.. ..-...+.| ++++..+.+.... .+.|..++...
T Consensus 155 ~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~---~~~I~~~~~~~ 198 (306)
T 2p4o_A 155 EHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE---KMLLLRIPVDS 198 (306)
T ss_dssp ECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT---TTEEEEEEBCT
T ss_pred ECCccccccccCCCCcCCCc--CcCCCEEEEEeCC---CCEEEEEEeCC
Confidence 10 111235666 7778766655432 56677777653
No 263
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.58 E-value=0.01 Score=59.44 Aligned_cols=164 Identities=9% Similarity=-0.065 Sum_probs=91.5
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
..+..|.|.+.+..++++-...+.|+.+++...... ......+........+|++.+.+..++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~-----------------~~~~~~i~~~~~~P~glavD~~~g~LY 468 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-----------------SSYDTVISRDIQAPDGLAVDWIHSNIY 468 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC------------------CCCCCBCCSCC--CCCEECCCSSSBCE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCC-----------------cceEEEEeCCCCCcceEEEEeeCCcEE
Confidence 445677888766456666556678888887641000 011111111111234566665544356
Q ss_pred EEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-CcEEEEECCCCCCceEEeecCCCCEE
Q 018235 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSFKAHNADVN 324 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~~~h~~~V~ 324 (359)
++-...+.|.+.++.. .... ..+.........|+++|.+..++++-... +.|..+++... .....+...-...+
T Consensus 469 ~tD~~~~~I~v~d~dg-~~~~---~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 469 WTDSVLGTVSVADTKG-VKRK---TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPN 543 (699)
T ss_dssp ECCTTTSCEEEEBSSS-CCEE---EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCC
T ss_pred EEeccCCeEEEEecCC-CceE---EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCcc
Confidence 6656678899999864 2211 11111223457889999766577665443 77888877643 22111222233467
Q ss_pred EEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 325 VISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 325 ~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.|+|+|++..|.|.... .+.|..++..
T Consensus 544 Glavd~~~~~LY~aD~~---~~~I~~~d~d 570 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSK---LHSISSIDVN 570 (699)
T ss_dssp CEEECTTTCCEEEEETT---TTEEEEECSS
T ss_pred EEEEeccCCEEEEEecC---CCeEEEEccC
Confidence 89999988777776542 4567777664
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.56 E-value=0.15 Score=45.78 Aligned_cols=164 Identities=9% Similarity=0.067 Sum_probs=98.1
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC----CC--CceEEEE
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HK--DEGYAID 236 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~--~~v~~l~ 236 (359)
....--.+++|.+....++++.-..|+|..|+..... ...+ .+.+ .. ....+|.
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~-------------------~~~~-~~~~~s~~g~~~~~~sGl~ 69 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS-------------------HFNV-VIDGASSNGDGEQQMSGLS 69 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC-------------------EEEE-CCTTTCCSSCCSEEEEEEE
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe-------------------EEEE-ecCCccccCCCcceeeEEE
Confidence 3344456789988664666766689999999986410 0001 1211 01 1347899
Q ss_pred e---CCCCCCeEEEEc-------------CCCcEEEEecC---CCCc-ceecCcccc-------CCC-CCeEEEEecCCC
Q 018235 237 W---NPITTGRLVTGD-------------CNSCIYLWEPA---SDAT-WNVDPNPFI-------GHS-ASVEDLQWSPTE 288 (359)
Q Consensus 237 ~---sp~~~~~l~sgs-------------~dg~I~lwd~~---~~~~-~~~~~~~~~-------~h~-~~V~~v~~sp~~ 288 (359)
| .|.+. ++++.. .+..|..+|+. ++.. +...+.... +.. ...++++..++|
T Consensus 70 ~~~~D~~gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G 148 (334)
T 2p9w_A 70 LLTHDNSKR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG 148 (334)
T ss_dssp ESSSSSCCE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS
T ss_pred EeccCCCCc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC
Confidence 9 57755 555433 25779999988 4222 221111111 112 358999999999
Q ss_pred CCEEEEEeCC-CcEEEEECCCCCCceEEee------cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 289 PDVFASCSVD-GHIAIWDTRVGKSALTSFK------AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 289 ~~~las~s~D-g~I~iwD~r~~~~~~~~~~------~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
. ..++++.- +.|...+.... .+..+. ......+.|.++|++..|+.... .+.|..+|..
T Consensus 149 n-aYVt~s~~~~~I~rV~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~----~g~L~~fD~~ 214 (334)
T 2p9w_A 149 N-SYVAFALGMPAIARVSADGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG----PRALTAFDVS 214 (334)
T ss_dssp C-EEEEEEESSCEEEEECTTSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS----SSSEEEEECS
T ss_pred C-EEEeCCCCCCeEEEEeCCCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC----CCeEEEEcCC
Confidence 8 88888887 87777776543 222221 11224679999999988877654 3445555544
No 265
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.52 E-value=0.2 Score=45.68 Aligned_cols=169 Identities=12% Similarity=0.021 Sum_probs=93.0
Q ss_pred EEEecC-CCceeeEEEeCCCCcEEEEE------------eCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe
Q 018235 159 LRKVAH-QGCVNRIRAMTQNPHICASW------------ADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (359)
Q Consensus 159 ~~~~~H-~~~V~~i~~~p~~~~~lat~------------s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
++.+.. ....-.|...|+| .+++++ ..+|.|.++|+...... ...+ .+
T Consensus 42 C~~i~~~~~G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~-----------------~~~l-~~ 102 (355)
T 3sre_A 42 CNLVKGIDNGSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA-----------------VSEL-EI 102 (355)
T ss_dssp EEECTTCCSCCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCC-----------------EEEC-EE
T ss_pred CEEeCCCCCCcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc-----------------eEEE-Ec
Confidence 344433 2345566778877 444444 16899999998752110 0111 12
Q ss_pred cC-----CCCceEEEEeCC--CCCCeEEEEc-C--CCcEEEEecCCCCcceecCccccCCC-CCeEEEEecCCCCCEEEE
Q 018235 226 GG-----HKDEGYAIDWNP--ITTGRLVTGD-C--NSCIYLWEPASDATWNVDPNPFIGHS-ASVEDLQWSPTEPDVFAS 294 (359)
Q Consensus 226 ~~-----h~~~v~~l~~sp--~~~~~l~sgs-~--dg~I~lwd~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~las 294 (359)
.+ ..-.-++|++.+ ++..+|+.+. . +.+|.+|++...+........+.+.. ...+++.+.++|. ++++
T Consensus 103 ~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt 181 (355)
T 3sre_A 103 IGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYAT 181 (355)
T ss_dssp ECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEE
T ss_pred cCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEec
Confidence 22 122456777655 3443455542 2 46788888765433222223444322 4689999999998 6666
Q ss_pred Ee-----------------CCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 295 CS-----------------VDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 295 ~s-----------------~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.. ..|.|.-+|. + . +..+...-...|.|+|+|+++.+.+.... .+.|..|+..
T Consensus 182 ~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~-~-~~~~~~~l~~pNGia~spDg~~lYvadt~---~~~I~~~~~~ 251 (355)
T 3sre_A 182 NDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N-D-VRVVAEGFDFANGINISPDGKYVYIAELL---AHKIHVYEKH 251 (355)
T ss_dssp ESCSCSSHHHHHHHHHTTCCCEEEEEECT--T-C-CEEEEEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEEC
T ss_pred CCcEeCCcccccchhhccCCccEEEEEEC--C-e-EEEeecCCcccCcceECCCCCEEEEEeCC---CCeEEEEEEC
Confidence 54 1244444544 2 2 22232223457999999999887766542 4556666653
No 266
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.45 E-value=0.29 Score=49.61 Aligned_cols=160 Identities=13% Similarity=-0.023 Sum_probs=95.3
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCe
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 244 (359)
......|++.+.+.+++++-...+.|.+.++... .....+........+|++.|... +
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---------------------~~~~l~~~~l~~P~gIaVDp~~g-~ 527 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---------------------KRKTLFRENGSKPRAIVVDPVHG-F 527 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---------------------SEEEEEECTTCCEEEEEEETTTT-E
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC---------------------eEEEEEeCCCCCcceEEEecCCC-C
Confidence 3556778888877678888788889999988751 11122222334577899988765 4
Q ss_pred EEEEc-C-CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC--C
Q 018235 245 LVTGD-C-NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH--N 320 (359)
Q Consensus 245 l~sgs-~-dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h--~ 320 (359)
|+..+ . .+.|...++.. .... ..+...-...+.|++++.+..++++-...+.|..+++... .....+... -
T Consensus 528 LYwtD~g~~~~I~~~~~dG-~~~~---~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~-~~~~v~~~~~~l 602 (791)
T 3m0c_C 528 MYWTDWGTPAKIKKGGLNG-VDIY---SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRL 602 (791)
T ss_dssp EEEEECSSSCEEEEEETTS-CCEE---EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTT
T ss_pred EEEecCCCCCeEEEEecCC-CceE---EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC-ceEEEecCCCcc
Confidence 44443 2 26788888753 2211 1122233568899999877757777777888999998764 322222221 1
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
.....|++. +..|.|.... .+.|...+..+|
T Consensus 603 ~~P~glav~--~~~lYwtD~~---~~~I~~~dk~tG 633 (791)
T 3m0c_C 603 AHPFSLAVF--EDKVFWTDII---NEAIFSANRLTG 633 (791)
T ss_dssp SSEEEEEEE--TTEEEEEETT---TTEEEEEETTTC
T ss_pred CCCCEEEEe--CCEEEEEECC---CCEEEEEeCCCC
Confidence 234455553 4456665432 344555554444
No 267
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.39 E-value=0.45 Score=43.93 Aligned_cols=160 Identities=13% Similarity=-0.017 Sum_probs=94.3
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCe
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 244 (359)
......+++.+.+.+++++-...+.|.+.++.. ......+........+|+..|.+. .
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g---------------------~~~~~l~~~~~~~P~~iavdp~~g-~ 215 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG---------------------VKRKTLFRENGSKPRAIVVDPVHG-F 215 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTT---------------------CSEEEEEECSSCCEEEEEEETTTT-E
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCC---------------------CceEEEEeCCCCCcceEEEecccC-e
Confidence 345678888875547777777788888888765 122222222333567899998765 4
Q ss_pred EEEEc-C-CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec--CC
Q 018235 245 LVTGD-C-NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA--HN 320 (359)
Q Consensus 245 l~sgs-~-dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~--h~ 320 (359)
|+..+ . .+.|...++.. .... ......-...+.|+++|.+..++.+-+..+.|..+|+... .....+.. .-
T Consensus 216 ly~td~~~~~~I~~~~~dG-~~~~---~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~l 290 (400)
T 3p5b_L 216 MYWTDWGTPAKIKKGGLNG-VDIY---SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRL 290 (400)
T ss_dssp EEEEECSSSCCEEEEETTS-CSCE---EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-CCEEEEECSSTT
T ss_pred EEEEeCCCCCEEEEEeCCC-CccE---EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC-ccEEEEeCCCCC
Confidence 44443 2 36788888753 2211 1112223567899999887757777777889999998764 22222221 22
Q ss_pred CCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 321 ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 321 ~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
.....|+. ++..+.|.... .+.|..++..+|
T Consensus 291 ~~P~gl~v--~~~~lywtd~~---~~~V~~~~~~~G 321 (400)
T 3p5b_L 291 AHPFSLAV--FEDKVFWTDII---NEAIFSANRLTG 321 (400)
T ss_dssp SSEEEEEE--ETTEEEEEESS---SCSEEEEESSSC
T ss_pred CCCEEEEE--eCCEEEEecCC---CCeEEEEEcCCC
Confidence 33456665 34455665432 344555554444
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.31 E-value=0.11 Score=46.29 Aligned_cols=110 Identities=15% Similarity=-0.018 Sum_probs=65.3
Q ss_pred eEEEEeCCCCCCeEEEEcCCCcEEEEecCCC--CcceecCccccCCCCCeEEEEecCCCCCEEEEEeC----------CC
Q 018235 232 GYAIDWNPITTGRLVTGDCNSCIYLWEPASD--ATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV----------DG 299 (359)
Q Consensus 232 v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~--~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~----------Dg 299 (359)
..+|+|+|++..++++-...+.|.+|++... +.. ..+..... ...+++.+++. ++++... .+
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~----~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~ 260 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTA----EVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNMHGRVDP 260 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCE----EEEEECSS-EEEEEECTTSC-EEEEEEEETTSSTTSCEEE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCcc----ceEEeCCC-CCCeEECCCCC-EEEEecCcccccccCCCcc
Confidence 4579999998723444456689999998642 111 11111123 77899999997 7776654 46
Q ss_pred cEEEEECCCCCCceEEeecC----CCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 300 HIAIWDTRVGKSALTSFKAH----NADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 300 ~I~iwD~r~~~~~~~~~~~h----~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
.|..+|.. + +.+..+... -..+.++++. ++.+++.+.. .+.|..++..
T Consensus 261 ~v~~~d~~-G-~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~----~~~i~~~~~~ 312 (322)
T 2fp8_A 261 KGIKFDEF-G-NILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLF----HGSVGILVYD 312 (322)
T ss_dssp EEEEECTT-S-CEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSS----CSEEEEEEC-
T ss_pred EEEEECCC-C-CEEEEEECCCCCccccceEEEEe-CCEEEEeecC----CCceEEEecc
Confidence 68888864 3 455555322 2346666663 5555544433 4567777654
No 269
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.21 E-value=1.1 Score=44.17 Aligned_cols=159 Identities=11% Similarity=-0.004 Sum_probs=99.2
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-C-CCCceEEEEeCCCCC
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-G-HKDEGYAIDWNPITT 242 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~l~~sp~~~ 242 (359)
-..+..|.|.+.+..++.+-..++.|+.+++.. ......+. + ....+.+++| .+.
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g---------------------~~~~~v~~~g~~~P~GlAvD~--~~~ 92 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNG---------------------SALEHVVEFGLDYPEGMAVDW--LGK 92 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---------------------CSCEEEECSSCSCCCEEEEET--TTT
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCC---------------------CCcEEEEeCCCCCcceEEEEe--CCC
Confidence 346778999997767888877889999988865 11112222 1 2234445554 444
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEE-eCCCcEEEEECCCCCCceEEeecCCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASC-SVDGHIAIWDTRVGKSALTSFKAHNA 321 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~-s~Dg~I~iwD~r~~~~~~~~~~~h~~ 321 (359)
.++++-...+.|.+.++....... .+...-....+|+++|....++.+- +..+.|...++... . ...+...-.
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~----l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-~-~~~l~~~~~ 166 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQV----LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-E-RTTLVPNVG 166 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEE----EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-S-CEEEECSCS
T ss_pred EEEEEECCCCEEEEEecCCCcEEE----EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-c-eEEEECCCC
Confidence 255666667889999885422111 1113335678999999655466665 33677888887754 2 223323445
Q ss_pred CEEEEEEcCCCCeEEEEeeecccceEEEEEeCcC
Q 018235 322 DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSR 355 (359)
Q Consensus 322 ~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~ 355 (359)
..+.|++.+.+..|.|.... .+.|...+...
T Consensus 167 ~P~GlalD~~~~~LY~aD~~---~~~I~~~d~dG 197 (628)
T 4a0p_A 167 RANGLTIDYAKRRLYWTDLD---TNLIESSNMLG 197 (628)
T ss_dssp SEEEEEEETTTTEEEEEETT---TTEEEEEETTS
T ss_pred CcceEEEccccCEEEEEECC---CCEEEEEcCCC
Confidence 68899999988888887653 45666666543
No 270
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.20 E-value=0.46 Score=44.14 Aligned_cols=104 Identities=11% Similarity=0.124 Sum_probs=70.6
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCccee--------cCccccC------CCCCeEEEEecCCCCC--EEEE
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV--------DPNPFIG------HSASVEDLQWSPTEPD--VFAS 294 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~--------~~~~~~~------h~~~V~~v~~sp~~~~--~las 294 (359)
.+..+..||.|. +||..+ +..|+|-.+..+..... ..+.+.- ....|..+.|||-+.+ .|++
T Consensus 67 ~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 678899999998 777775 66888888763211100 0011111 3578999999997643 8999
Q ss_pred EeCCCcEEEEECCCC-CCceEEe---------ecCCCCEEEEEEcCCCCeEEE
Q 018235 295 CSVDGHIAIWDTRVG-KSALTSF---------KAHNADVNVISWNRCWLAVCW 337 (359)
Q Consensus 295 ~s~Dg~I~iwD~r~~-~~~~~~~---------~~h~~~V~~i~~s~~~~~l~~ 337 (359)
-..|+.||+||+... ..|. .+ ......|.+++|..++-.|..
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 999999999999863 2233 22 223367899999996654444
No 271
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.18 E-value=0.11 Score=47.11 Aligned_cols=66 Identities=9% Similarity=0.083 Sum_probs=40.7
Q ss_pred eEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEee
Q 018235 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (359)
.++.++.++.|..+|..++ +.. ..+............. +. .++.++.++.|..+|.+++ +.+..+.
T Consensus 105 ~v~v~~~~g~l~a~d~~tG-~~~---W~~~~~~~~~~~p~~~--~~-~v~v~~~~g~l~~~d~~tG-~~~W~~~ 170 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDG-TVA---WQTKVAGEALSRPVVS--DG-LVLIHTSNGQLQALNEADG-AVKWTVN 170 (376)
T ss_dssp EEEEEETTSEEEEEETTTC-CEE---EEEECSSCCCSCCEEE--TT-EEEEECTTSEEEEEETTTC-CEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCC-CEE---EEEeCCCceEcCCEEE--CC-EEEEEcCCCeEEEEECCCC-cEEEEEe
Confidence 7888888999999999874 322 1111111111111111 33 6777888999999999988 5555553
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.12 E-value=0.31 Score=45.65 Aligned_cols=158 Identities=9% Similarity=0.076 Sum_probs=93.3
Q ss_pred CceeeEEEeC-CCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCC-cEEe-cCCCCceEEEEeCCCCC
Q 018235 166 GCVNRIRAMT-QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP-LVKF-GGHKDEGYAIDWNPITT 242 (359)
Q Consensus 166 ~~V~~i~~~p-~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~h~~~v~~l~~sp~~~ 242 (359)
...+.+++.| .+ .++++-..++.|+.++... ... ...+ .+.....+.|+|+|++.
T Consensus 228 ~~P~giavd~~~G-~lyv~d~~~~~V~~~d~~~---------------------g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 228 RGAKTCAVHPQNG-KIYYTRYHHAMISSYDPAT---------------------GTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp SSBCCCEECTTTC-CEEECBTTCSEEEEECTTT---------------------CCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred CCCCEEEEeCCCC-eEEEEECCCCEEEEEECCC---------------------CeEEEEEeccCCCCCcccEEEeCCCC
Confidence 3456678888 55 6777766778888888763 111 0111 11122345799999997
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccC---------------CCCCeEEEEe---------cCCCCCEEEEEeCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIG---------------HSASVEDLQW---------SPTEPDVFASCSVD 298 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~---------------h~~~V~~v~~---------sp~~~~~las~s~D 298 (359)
.++++-...+.|+.+++............+.+ .-.....+++ .+.+. ++++-...
T Consensus 286 ~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n 364 (433)
T 4hw6_A 286 WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDS 364 (433)
T ss_dssp EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTT
T ss_pred EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCC
Confidence 34455556778999886531111100011111 1123567898 66666 88888888
Q ss_pred CcEEEEECCCCCCceEEeecC------------------CCCEEEEEEc-CCCCeEEEEeeecccceEEEEEeC
Q 018235 299 GHIAIWDTRVGKSALTSFKAH------------------NADVNVISWN-RCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 299 g~I~iwD~r~~~~~~~~~~~h------------------~~~V~~i~~s-~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
+.|+.++. .+ .+.++.+. -.....|+++ +++.+++.+.. ++.|+.++.
T Consensus 365 ~~I~~~~~-~G--~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~----n~rIr~i~~ 431 (433)
T 4hw6_A 365 HTVRVLTP-EG--RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD----NHRVRKIAP 431 (433)
T ss_dssp TEEEEECT-TS--EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG----GTEEEEEEE
T ss_pred CEEEEECC-CC--CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC----CCEEEEEec
Confidence 99999985 32 34443221 1136789999 67777776655 566777654
No 273
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.12 E-value=0.74 Score=41.52 Aligned_cols=100 Identities=9% Similarity=-0.066 Sum_probs=58.5
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeec-CCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-HNA 321 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~-h~~ 321 (359)
+.++.++.++.|..+|..+ ++.. .... ......+... +. .+..++.++.|..+|..++ +.+..... ...
T Consensus 240 ~~v~~~~~~g~l~~~d~~t-G~~~---w~~~--~~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG-~~~w~~~~~~~~ 309 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRS-GQIM---WKRE--LGSVNDFIVD--GN-RIYLVDQNDRVMALTIDGG-VTLWTQSDLLHR 309 (376)
T ss_dssp TEEEEECTTSCEEEEETTT-CCEE---EEEC--CCCEEEEEEE--TT-EEEEEETTCCEEEEETTTC-CEEEEECTTTTS
T ss_pred CEEEEEecCcEEEEEECCC-CcEE---eecc--CCCCCCceEE--CC-EEEEEcCCCeEEEEECCCC-cEEEeecccCCC
Confidence 3788888899999999987 4322 1111 1233444433 44 6777788999999999988 55555431 111
Q ss_pred CEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 322 DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 322 ~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.+...... +..|+.... ++.|.++|..+|++
T Consensus 310 ~~~~~~~~--~~~l~v~~~----~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 310 LLTSPVLY--NGNLVVGDS----EGYLHWINVEDGRF 340 (376)
T ss_dssp CCCCCEEE--TTEEEEECT----TSEEEEEETTTCCE
T ss_pred cccCCEEE--CCEEEEEeC----CCeEEEEECCCCcE
Confidence 12222222 334444433 56677888777764
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.07 E-value=0.49 Score=41.62 Aligned_cols=162 Identities=9% Similarity=-0.051 Sum_probs=85.1
Q ss_pred CCCceeeEEEeCCCCcEEEEEeC-CC-cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWAD-TG-HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~-dg-~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 241 (359)
..+..+.+++.+++ +++++... ++ .|..++..... ...+..+. ......+++..+.+
T Consensus 70 ~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~-------------------~~~~~~~~-~~~~~~g~~~~~~~ 128 (306)
T 2p4o_A 70 VEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGT-------------------VETLLTLP-DAIFLNGITPLSDT 128 (306)
T ss_dssp CSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSC-------------------EEEEEECT-TCSCEEEEEESSSS
T ss_pred CCCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCe-------------------EEEEEeCC-CccccCcccccCCC
Confidence 34678999999998 45555433 22 46666654410 00111111 11122344444443
Q ss_pred CCeEEEEcCCCcEEEEecCCCC-cceecCc-----cccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCC-CC-Cce
Q 018235 242 TGRLVTGDCNSCIYLWEPASDA-TWNVDPN-----PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV-GK-SAL 313 (359)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~-~~~~~~~-----~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~-~~-~~~ 313 (359)
. .+++-...+.|+++|..... ....... .....-...+.| +|++..++++-+..+.|..+|+.. +. ...
T Consensus 129 ~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 129 Q-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp E-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred c-EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 3 45555468889888875421 1110000 011122345566 788876778888889999999875 21 111
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
..+.. ......|++.++|.+++.... .+.|.+++..
T Consensus 206 ~~~~~-~~~P~gi~vd~dG~l~va~~~----~~~V~~~~~~ 241 (306)
T 2p4o_A 206 EIFVE-QTNIDDFAFDVEGNLYGATHI----YNSVVRIAPD 241 (306)
T ss_dssp EEEEE-SCCCSSEEEBTTCCEEEECBT----TCCEEEECTT
T ss_pred EEEec-cCCCCCeEECCCCCEEEEeCC----CCeEEEECCC
Confidence 12211 123456788888876554432 4456667654
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.06 E-value=0.24 Score=46.38 Aligned_cols=153 Identities=10% Similarity=0.054 Sum_probs=88.1
Q ss_pred eeeEEEeCC--CCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 168 VNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 168 V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
-..|++.|+ +..++++-.. +.|+.++... ..+..+........+|+|++++. ++
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~----------------------g~v~~~~~~~~~P~giavd~dG~-ly 196 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVN----------------------QYVDIKTTNIGQCADVNFTLNGD-MV 196 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTT----------------------TEEEEECCCCSCEEEEEECTTCC-EE
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCC----------------------CEEEEeecCCCCccEEEECCCCC-EE
Confidence 457788884 2255555333 7888888754 22334444445678999999998 66
Q ss_pred EEEcCC---C-cEEEEecCCCCcceecCccccCCCCCeEEEEecC-CCCCEEEEEeCCCcEEEEECCCCCCceEEe-e-c
Q 018235 246 VTGDCN---S-CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSF-K-A 318 (359)
Q Consensus 246 ~sgs~d---g-~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~-~-~ 318 (359)
++.... . .+...+... .+.. ...+. .-.....++++| .+. ++++-..++.|+.+|..++ .....+ . .
T Consensus 197 Vad~~~~~~~~gv~~~~~~~--~~~~-~~~~~-~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g-~~~~~~~~~~ 270 (433)
T 4hw6_A 197 VVDDQSSDTNTGIYLFTRAS--GFTE-RLSLC-NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATG-TLTEEEVMMD 270 (433)
T ss_dssp EEECCSCTTSEEEEEECGGG--TTCC-EEEEE-ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTC-CEEEEEEECS
T ss_pred EEcCCCCcccceEEEEECCC--Ceec-ccccc-ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCC-eEEEEEeccC
Confidence 665422 1 133333221 1110 01111 223456688999 555 8877778889999998865 331222 1 1
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 319 HNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 319 h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
....-..|+|+|++..|.+.... .+.|..++.
T Consensus 271 ~~~~~~~ia~dpdG~~LYvad~~---~~~I~~~~~ 302 (433)
T 4hw6_A 271 TKGSNFHIVWHPTGDWAYIIYNG---KHCIYRVDY 302 (433)
T ss_dssp CCSSCEEEEECTTSSEEEEEETT---TTEEEEEEB
T ss_pred CCCCcccEEEeCCCCEEEEEeCC---CCEEEEEeC
Confidence 12223569999999855555432 566777653
No 276
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.01 E-value=0.013 Score=53.84 Aligned_cols=102 Identities=5% Similarity=-0.182 Sum_probs=66.8
Q ss_pred cEEEEEeCCC----cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEEEc-----
Q 018235 179 HICASWADTG----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD----- 249 (359)
Q Consensus 179 ~~lat~s~dg----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sgs----- 249 (359)
.++++-..++ +|.++|..+ .+.+.++..-..+ .+.++|++. +++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t---------------------~~v~~~i~vG~~P--~i~~spDg~-~lyVan~~~~r 88 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGC---------------------GVTLGHSLGAFLS--LAVAGHSGS-DFALASTSFAR 88 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTT---------------------TEEEEEEEECTTC--EEEECTTSS-CEEEEEEEETT
T ss_pred eEEEECCccCCccceEEEEECCC---------------------CeEEEEEeCCCCC--ceEECCCCC-EEEEEcccccc
Confidence 3555555455 888999887 4555666443445 799999998 666554
Q ss_pred -----CCCcEEEEecCCCCcceecCccccCC-------CCCeEEEEecCCCCCEEEEEeC-CCcEEE--EECCC
Q 018235 250 -----CNSCIYLWEPASDATWNVDPNPFIGH-------SASVEDLQWSPTEPDVFASCSV-DGHIAI--WDTRV 308 (359)
Q Consensus 250 -----~dg~I~lwd~~~~~~~~~~~~~~~~h-------~~~V~~v~~sp~~~~~las~s~-Dg~I~i--wD~r~ 308 (359)
.++.|.+||+.+ .+.. ..+... ......++++|+++.++++... ...|.+ +|+.+
T Consensus 89 ~~~G~~~~~VsviD~~T-~~vv---~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 89 SAKGKRTDYVEVFDPVT-FLPI---ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp TTSSSEEEEEEEECTTT-CCEE---EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred cccCCCCCEEEEEECCC-CCEE---EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 468899999987 4433 222211 1234568999999955555433 467888 88854
No 277
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.98 E-value=0.079 Score=52.94 Aligned_cols=72 Identities=11% Similarity=0.174 Sum_probs=45.3
Q ss_pred EEEecCCCCCEEEEEeCCCc-------------------EEEEECCCCCCceEEeec--CC-------CCEEEEEEcCCC
Q 018235 281 DLQWSPTEPDVFASCSVDGH-------------------IAIWDTRVGKSALTSFKA--HN-------ADVNVISWNRCW 332 (359)
Q Consensus 281 ~v~~sp~~~~~las~s~Dg~-------------------I~iwD~r~~~~~~~~~~~--h~-------~~V~~i~~s~~~ 332 (359)
.++++|... +++.++.++. |..||.+++ +.+..+.. |. ..+.......+|
T Consensus 239 ~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG-~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 239 SFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTG-EYVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTC-CEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCC-ceeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 577888877 7888877763 999999998 66666643 21 112112222234
Q ss_pred C---eEEEEeeecccceEEEEEeCcCCcc
Q 018235 333 L---AVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 333 ~---~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
. .++... .++.+.++|..+|++
T Consensus 317 ~~~~~v~~~~----~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 317 KPRKVLMQAP----KNGFFYVIDRATGEL 341 (689)
T ss_dssp EEEEEEEECC----TTSEEEEEETTTCCE
T ss_pred cEEEEEEEEC----CCCeEEEEECCCCCE
Confidence 3 333333 378889999888874
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.92 E-value=0.73 Score=39.74 Aligned_cols=167 Identities=7% Similarity=-0.018 Sum_probs=97.2
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
+..-.|++.+.+ .++++.-.++.+.++++....... ..... ..++. .........+|+|+|.+. .|
T Consensus 70 ~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i~-~~~~~----------~~~~~-~~~~N~g~EGLA~d~~~~-~L 135 (255)
T 3qqz_A 70 KDLETIEYIGDN-QFVISDERDYAIYVISLTPNSEVK-ILKKI----------KIPLQ-ESPTNCGFEGLAYSRQDH-TF 135 (255)
T ss_dssp SSEEEEEECSTT-EEEEEETTTTEEEEEEECTTCCEE-EEEEE----------ECCCS-SCCCSSCCEEEEEETTTT-EE
T ss_pred CChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCeee-eeeee----------ccccc-cccccCCcceEEEeCCCC-EE
Confidence 577788888877 566665567889999887632100 00000 00000 011234568999999986 55
Q ss_pred EEEcCCCcEEEEecCC--CC-ccee-cCccc--cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC
Q 018235 246 VTGDCNSCIYLWEPAS--DA-TWNV-DPNPF--IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH 319 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~--~~-~~~~-~~~~~--~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h 319 (359)
+++.......||.++. .. ...+ ....+ ..+...+.+++++|...++++.....+.|.++|... +.+..+.-.
T Consensus 136 ~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~ 213 (255)
T 3qqz_A 136 WFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLT 213 (255)
T ss_dssp EEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECS
T ss_pred EEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcC
Confidence 5555444445555431 01 1110 00001 113346789999998887888888889999999775 344433211
Q ss_pred C---------CCEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 320 N---------ADVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 320 ~---------~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
. ..--.|+|.++|.+.+.+ . .+.+..+..
T Consensus 214 ~g~~~l~~~~~qpEGia~d~~G~lyIvs-E----~n~~y~f~~ 251 (255)
T 3qqz_A 214 KGSRGLSHNIKQAEGVAMDASGNIYIVS-E----PNRFYRFTP 251 (255)
T ss_dssp TTGGGCSSCCCSEEEEEECTTCCEEEEE-T----TTEEEEEEC
T ss_pred CccCCcccccCCCCeeEECCCCCEEEEc-C----CceEEEEEe
Confidence 1 246789999999866653 3 556665544
No 279
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.84 E-value=1.1 Score=43.92 Aligned_cols=164 Identities=7% Similarity=-0.113 Sum_probs=98.3
Q ss_pred cCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
..-+....+.|.+.+..++.+=...+.|+.+++... ......+..-.....+|++.+.+.
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~--------------------~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--------------------ESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------------CEEEECSSCSCEEEEEEETTTT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC--------------------CceEEEEeCCCCCcCeEEEEecCC
Confidence 344567789999877577777666788888888651 111222332223456677766555
Q ss_pred CeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEe-CCCcEEEEECCCCCCceEEeecCCC
Q 018235 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-VDGHIAIWDTRVGKSALTSFKAHNA 321 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-~Dg~I~iwD~r~~~~~~~~~~~h~~ 321 (359)
.++++-...+.|.+.++.. .... ..+...-....+|++.|.+..++.|-. ..+.|...++... .....+...-.
T Consensus 97 ~ly~~d~~~~~I~v~~~dG-~~~~---~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-~~~~l~~~~~~ 171 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDG-SLRK---VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIY 171 (619)
T ss_dssp EEEEEETTTTEEEEEETTS-CSCE---EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCS
T ss_pred EEEEEeCCCCEEEEEECCC-CCEE---EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC-ceEEEEeCCCC
Confidence 3666666778999999864 2211 111123345678999997664777653 3466777776643 22222223345
Q ss_pred CEEEEEEcCCCCeEEEEeeecccceEEEEEeCc
Q 018235 322 DVNVISWNRCWLAVCWHLEVMMEHFLFMILDCS 354 (359)
Q Consensus 322 ~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~ 354 (359)
..+.|++.+.+..|.|.... ...|...+..
T Consensus 172 ~P~Glald~~~~~LY~aD~~---~~~I~~~~~d 201 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAK---LNFIHKSNLD 201 (619)
T ss_dssp SEEEEEEETTTTEEEEEETT---TCCEEEESSS
T ss_pred CCcEEEEEccCCEEEEEeCC---CCeEEEecCC
Confidence 67999999988888877542 4456666554
No 280
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.77 E-value=1.2 Score=45.04 Aligned_cols=162 Identities=12% Similarity=0.042 Sum_probs=94.9
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 245 (359)
..|.++...+++ .+. .|+.++-|..|+..... +.... ..+. .-.-....|.++...+++ .|
T Consensus 310 ~~i~~i~~D~~g-~lW-igt~~~Gl~~~~~~~~~--~~~~~------------~~~~-~~~l~~~~V~~i~~d~~g--~l 370 (795)
T 4a2l_A 310 RSVRSIFMDSQG-GMW-LGTYFGGLNYYHPIRNR--FKNIR------------NIPY-KNSLSDNVVSCIVEDKDK--NL 370 (795)
T ss_dssp SCEEEEEECTTS-CEE-EEESSSCEEEECGGGGS--SEEEC------------CCTT-SSSCSCSSEEEEEECTTS--CE
T ss_pred CcEEEEEEeCCc-CEE-EEECCCCeEEeCCCccc--ceEEc------------CCCC-CCCCCCCeeEEEEECCCC--CE
Confidence 457888887777 333 34566778888765410 00000 0000 000123468899887776 46
Q ss_pred EEEcCCCcEEEEecCCCCcceecCccc-----cCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEee---
Q 018235 246 VTGDCNSCIYLWEPASDATWNVDPNPF-----IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--- 317 (359)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~--- 317 (359)
..|+.++-|..|+..+ +....-.... .-....|.++...+++. +|..|+.++-|.+||..++ . ...+.
T Consensus 371 WiGt~~~Gl~~~~~~~-~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~-~-~~~~~~~~ 446 (795)
T 4a2l_A 371 WIGTNDGGLNLYNPIT-QRFTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSG-Q-VENFNQRN 446 (795)
T ss_dssp EEEESSSCEEEECTTT-CCEEEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTC-C-EEEECTTT
T ss_pred EEEECCCCeEEEcCCC-CcEEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCC-c-EEEeecCC
Confidence 6687787899999865 3322100000 01235789999888876 5777888788999998875 2 33332
Q ss_pred --cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 318 --AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 318 --~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
.....|.+|...+++.+.+.+. .+ |.+|+..++
T Consensus 447 ~~l~~~~v~~i~~d~~g~lwigt~-----~G-l~~~~~~~~ 481 (795)
T 4a2l_A 447 SQLVNENVYAILPDGEGNLWLGTL-----SA-LVRFNPEQR 481 (795)
T ss_dssp SCCSCSCEEEEEECSSSCEEEEES-----SC-EEEEETTTT
T ss_pred CCcCCCeeEEEEECCCCCEEEEec-----Cc-eeEEeCCCC
Confidence 2345789999888887655442 12 455655543
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.51 E-value=0.029 Score=56.18 Aligned_cols=157 Identities=12% Similarity=-0.038 Sum_probs=84.3
Q ss_pred eeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEe-cCCCCceEEEEeCCCCCCeEE
Q 018235 168 VNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF-GGHKDEGYAIDWNPITTGRLV 246 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~ 246 (359)
...|++.+.+.+++++-...+.|.++++.. ..+.++ ........+|++.|.+..+++
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg----------------------~~~~~l~~~~~~~P~giavDp~~g~ly~ 512 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG----------------------VKRKTLFREQGSKPRAIVVDPVHGFMYW 512 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSS----------------------CCEEEECCCSSCCCCCEECCSSSSCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCC----------------------CceEEEEeCCCCCcceEEEccCCCcEEE
Confidence 345666644435666655667788887765 111222 111223467888887652444
Q ss_pred EEcCC-CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEee--cCCCCE
Q 018235 247 TGDCN-SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNADV 323 (359)
Q Consensus 247 sgs~d-g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~--~h~~~V 323 (359)
+-... +.|.+.++....... .....-...+.|+|+|.+..++++-+..+.|..+|+... .....+. ..-...
T Consensus 513 td~~~~~~I~~~~~dG~~~~~----l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~P 587 (699)
T 1n7d_A 513 TDWGTPAKIKKGGLNGVDIYS----LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHP 587 (699)
T ss_dssp CCCSSSCCEEBCCSSSCCCCE----ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSSC
T ss_pred cccCCCCeEEEEeCCCCCeeE----EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCCc
Confidence 43222 678777764321111 111122345789999987768888888899999998753 2221121 111122
Q ss_pred EEEEEcCCCCeEEEEeeecccceEEEEEeCcCC
Q 018235 324 NVISWNRCWLAVCWHLEVMMEHFLFMILDCSRG 356 (359)
Q Consensus 324 ~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g 356 (359)
..|++. +..|+|.... .+.|..++..+|
T Consensus 588 ~glavd--~~~lywtd~~---~~~V~~~d~~~G 615 (699)
T 1n7d_A 588 FSLAVF--EDKVFWTDII---NEAIFSANRLTG 615 (699)
T ss_dssp CCCEEE--TTEEEEECST---TTCEEEEETTTE
T ss_pred eEeEEE--CCEEEEEeCC---CCeEEEEEccCC
Confidence 334443 3356665432 345666655443
No 282
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.34 E-value=0.15 Score=50.59 Aligned_cols=55 Identities=15% Similarity=0.041 Sum_probs=37.5
Q ss_pred CCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+|.|..||++++ +.+.++..+ ..++...+...+.+++.+.. ++.|+.||..+|++
T Consensus 437 ~g~l~A~D~~tG-~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~----dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 437 SGALLAWDPVKQ-KAAWKVPYP-THWNGGTLSTAGNLVFQGTA----AGQMHAYSADKGEA 491 (668)
T ss_dssp EEEEEEEETTTT-EEEEEEEES-SSCCCCEEEETTTEEEEECT----TSEEEEEETTTCCE
T ss_pred cceEEEEeCCCC-cEEEEccCC-CCCcCceeEeCCCEEEEECC----cccchhhhhhcChh
Confidence 478999999998 666665433 23333344556667766644 78899999988874
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.27 E-value=0.77 Score=43.70 Aligned_cols=171 Identities=9% Similarity=0.011 Sum_probs=94.8
Q ss_pred eeeEEEeCCCCcEEEEEeCCCcEEEEECC-------CCcc-ccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC
Q 018235 168 VNRIRAMTQNPHICASWADTGHVQVWDLR-------SHLN-ALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg~V~iwd~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 239 (359)
.+.++++|.+..++++-..++.|+.+|+. .... ....... . . ....+... +....-+.|+|+|
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~--~---g---~~~~l~~~-~~~~~p~~ia~~p 319 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN--P---N---TFKQLFTI-ADPSWEFQIFIHP 319 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC--T---T---TEEEEEEC-SSSSCCEEEEECT
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc--c---c---ccceeEec-CCCCCceEEEEcC
Confidence 35778899665888888888999999986 2100 0000000 0 0 00011222 2233457999999
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCcceecCccccC------C---------CCCeE-EEEec-------CCCCCEEEEEe
Q 018235 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG------H---------SASVE-DLQWS-------PTEPDVFASCS 296 (359)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~------h---------~~~V~-~v~~s-------p~~~~~las~s 296 (359)
++..++++=....+|+.++.......+.....+.+ . -.... .+... +.+. ++++-.
T Consensus 320 ~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~ 398 (496)
T 3kya_A 320 TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYD-FYFVDR 398 (496)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEE-EEEEEG
T ss_pred CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCe-EEEEEC
Confidence 99733455456778888665431111100011111 1 01233 34444 3455 888888
Q ss_pred CCCcEEEEECCCCCCceEEeecCC------------------------CCEEEEEEcCC-CCeEEEEeeecccceEEEEE
Q 018235 297 VDGHIAIWDTRVGKSALTSFKAHN------------------------ADVNVISWNRC-WLAVCWHLEVMMEHFLFMIL 351 (359)
Q Consensus 297 ~Dg~I~iwD~r~~~~~~~~~~~h~------------------------~~V~~i~~s~~-~~~l~~~~~~~~~d~~i~iw 351 (359)
.+++||.++. .+ .+.++.+.. .....|++.++ +.+++.+.. ++.|+.+
T Consensus 399 ~N~rIr~i~~-~G--~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~----N~rIrki 471 (496)
T 3kya_A 399 LNFCVRKVTP-EG--IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQV----GHTIRTI 471 (496)
T ss_dssp GGTEEEEECT-TC--BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETT----TTEEEEE
T ss_pred CCCEEEEEeC-CC--CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCC----CCEEEEE
Confidence 8999999983 33 344553220 12568999996 777777765 6778877
Q ss_pred eCcC
Q 018235 352 DCSR 355 (359)
Q Consensus 352 d~~~ 355 (359)
+...
T Consensus 472 ~~~~ 475 (496)
T 3kya_A 472 SMEQ 475 (496)
T ss_dssp EECC
T ss_pred ECCC
Confidence 7654
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.04 E-value=1.8 Score=38.53 Aligned_cols=157 Identities=11% Similarity=0.095 Sum_probs=83.8
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCCcEEE-EECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCC
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQV-WDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 240 (359)
.++.+.+..+.+.+.+ .+++.+. .|.++. +|-... ...++ -......++.+.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~g~-~G~~~~S~d~gG~-------------------tW~~~--~~~~~~~~~~~~~~~~ 215 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSG-EYVAVSS-RGSFYSTWEPGQT-------------------AWEPH--NRTTSRRLHNMGFTPD 215 (327)
T ss_dssp CSCCCCEEEEEECTTS-CEEEEET-TSSEEEEECTTCS-------------------SCEEE--ECCSSSCEEEEEECTT
T ss_pred cCCCcceEEEEEcCCC-cEEEEEC-CCcEEEEeCCCCC-------------------ceeEC--CCCCCCccceeEECCC
Confidence 3556678888888876 5666544 454443 332110 11221 1233456788999888
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEee---
Q 018235 241 TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--- 317 (359)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~--- 317 (359)
+. ++ .++.+|.++++....+..|.....+-..+...+.++.+.|.+. +++++. +|.| ++....+ ..-..+.
T Consensus 216 g~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g~-~g~i-~~S~DgG-~tW~~~~~~~ 289 (327)
T 2xbg_A 216 GR-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAGG-AGAL-LCSQDGG-QTWQQDVDVK 289 (327)
T ss_dssp SC-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEES-TTCE-EEESSTT-SSCEECGGGT
T ss_pred CC-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE-EEEEeC-CCeE-EEeCCCC-cccEEcCccC
Confidence 75 44 4445788877743222334310011011234689999998766 666554 6766 3434433 2222232
Q ss_pred cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEe
Q 018235 318 AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILD 352 (359)
Q Consensus 318 ~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd 352 (359)
.+...+++|.|.+++.+++.+. ++.|..++
T Consensus 290 ~~~~~~~~v~~~~~~~~~~~G~-----~G~i~~~~ 319 (327)
T 2xbg_A 290 KVPSNFYKILFFSPDQGFILGQ-----KGILLRYV 319 (327)
T ss_dssp TSSSCCCEEEEEETTEEEEECS-----TTEEEEEC
T ss_pred CCCCCeEEEEEECCCceEEEcC-----CceEEEEc
Confidence 2345688899976665544442 44454444
No 285
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.02 E-value=2.5 Score=42.57 Aligned_cols=142 Identities=6% Similarity=0.012 Sum_probs=87.0
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec---------CCCCceEEEE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG---------GHKDEGYAID 236 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~ 236 (359)
..|.++...+++ .+.+ |+.++-|..|+.... . ...+. .....|+++.
T Consensus 357 ~~V~~i~~d~~g-~lWi-Gt~~~Gl~~~~~~~~---------------------~-~~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 357 NVVSCIVEDKDK-NLWI-GTNDGGLNLYNPITQ---------------------R-FTSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp SSEEEEEECTTS-CEEE-EESSSCEEEECTTTC---------------------C-EEEECCC------CCSCSCEEEEE
T ss_pred CeeEEEEECCCC-CEEE-EECCCCeEEEcCCCC---------------------c-EEEEecCCCCcccCCCCccEEEEE
Confidence 457888887777 4433 566667888887651 1 11111 1234688888
Q ss_pred eCCCCCCeEEEEcCCCcEEEEecCCCCcceecCc-cccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPN-PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 237 ~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~-~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
..+.+. .|..|+.++-|.+|+..+ +....-.. .-......|.++...+++. +.+. +. +.|.+||..++ ....
T Consensus 413 ~d~~g~-~lWigt~~~Gl~~~d~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwig-t~-~Gl~~~~~~~~--~~~~ 485 (795)
T 4a2l_A 413 VDEKKS-LVYIGTHAGGLSILHRNS-GQVENFNQRNSQLVNENVYAILPDGEGN-LWLG-TL-SALVRFNPEQR--SFTT 485 (795)
T ss_dssp EETTTT-EEEEEETTTEEEEEETTT-CCEEEECTTTSCCSCSCEEEEEECSSSC-EEEE-ES-SCEEEEETTTT--EEEE
T ss_pred EcCCCC-EEEEEeCcCceeEEeCCC-CcEEEeecCCCCcCCCeeEEEEECCCCC-EEEE-ec-CceeEEeCCCC--eEEE
Confidence 877663 388888777899999876 33221000 0002345799999988887 5444 34 45888998764 2223
Q ss_pred eec-------CCCCEEEEEEcCCCCeEEEE
Q 018235 316 FKA-------HNADVNVISWNRCWLAVCWH 338 (359)
Q Consensus 316 ~~~-------h~~~V~~i~~s~~~~~l~~~ 338 (359)
+.. ....|.++...++|.+.+.+
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEe
Confidence 321 23568999988888765544
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.75 E-value=3.5 Score=40.50 Aligned_cols=115 Identities=8% Similarity=-0.049 Sum_probs=71.4
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCC--cEEEEECCC
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--HIAIWDTRV 308 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--~I~iwD~r~ 308 (359)
...+|++...+..++++-+..+.|.+.++.. .... ..+........+|+++|....++.+-.... .|...++..
T Consensus 390 ~p~glAvD~~~~nLY~td~~~~~I~v~~~~G--~~~~--~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG 465 (628)
T 4a0p_A 390 QPYDLSIDIYSRYIYWTCEATNVINVTRLDG--RSVG--VVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDG 465 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS--CEEE--EEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEeeccCCeEEEEcCCCCEEEEEECCC--CeEE--EEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCC
Confidence 4567777667664667777788999988753 3221 112234467899999995444777755444 466666654
Q ss_pred CCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 309 GKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 309 ~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
. .....+...-...+.|++.+.+..|.|.... .+.|...+.
T Consensus 466 ~-~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~---~~~I~~~~~ 506 (628)
T 4a0p_A 466 T-EREVLFFSGLSKPIALALDSRLGKLFWADSD---LRRIESSDL 506 (628)
T ss_dssp C-SCEEEECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEET
T ss_pred C-CcEEEEeccCCCccEEEEeCCCCEEEEEeCC---CCEEEEEeC
Confidence 3 2222223234467999999988888887542 345666654
No 287
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.64 E-value=3.7 Score=40.25 Aligned_cols=156 Identities=6% Similarity=-0.116 Sum_probs=86.3
Q ss_pred eeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCCCeEEE
Q 018235 168 VNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVT 247 (359)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~s 247 (359)
+..+.|.+.+..++.+-...+.|+.+++.. ......+........+|++.+.+..++++
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g---------------------~~~~~v~~~~~~~p~GlAvD~~~~~lY~t 409 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEVRAIRRSFIDG---------------------SGSQFVVTAQIAHPDGIAVDWVARNLYWT 409 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTS---------------------CSCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred cEEEEEEcCCCeEEEEeCCCCeEEEEEcCC---------------------CccEEEEECCCCCcCceEEecccCcEEEE
Confidence 345556654434555544556666666544 11112222222233345554444436666
Q ss_pred EcCCCcEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEeC-CCcEEEEECCCCCCceEEeecCCCCEEE
Q 018235 248 GDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTSFKAHNADVNV 325 (359)
Q Consensus 248 gs~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~~~~h~~~V~~ 325 (359)
-+..+.|.+.++... . . ..+ ...-....+|++.|....++.+-.. ...|...++... .....+...-...+.
T Consensus 410 D~~~~~I~v~~~~G~-~-~---~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~-~~~~l~~~~l~~P~G 483 (619)
T 3s94_A 410 DTGTDRIEVTRLNGT-M-R---KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS-DRVVLVNTSLGWPNG 483 (619)
T ss_dssp ETTTTEEEEEETTSC-S-C---EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEE
T ss_pred eCCCCcEEEEeCCCC-e-E---EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC-ccEEEEeCCCCCCee
Confidence 666788999988642 2 1 122 2234568899999975436666533 466777776643 222222333456789
Q ss_pred EEEcCCCCeEEEEeeecccceEEEEEeC
Q 018235 326 ISWNRCWLAVCWHLEVMMEHFLFMILDC 353 (359)
Q Consensus 326 i~~s~~~~~l~~~~~~~~~d~~i~iwd~ 353 (359)
|++.+.+..|.|.... .+.|...+.
T Consensus 484 lalD~~~~~LY~aD~~---~~~I~~~~~ 508 (619)
T 3s94_A 484 LALDYDEGKIYWGDAK---TDKIEVMNT 508 (619)
T ss_dssp EEEETTTTEEEEEETT---TTEEEEEES
T ss_pred eEEcccCCEEEEEECC---CCEEEEEec
Confidence 9999988888777542 345555554
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.63 E-value=2.3 Score=39.51 Aligned_cols=122 Identities=7% Similarity=-0.031 Sum_probs=72.8
Q ss_pred ecCCCceeeEEEeCCCCcEEEEEeCCC----cEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEe
Q 018235 162 VAHQGCVNRIRAMTQNPHICASWADTG----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (359)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (359)
.......+.|++.+++..++++....+ .+.+++.... ......+.. .....++++
T Consensus 175 ~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~--------------------~~~~~~l~~-~~~p~giav 233 (430)
T 3tc9_A 175 YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG--------------------FKVITELTK-GQNCNGAET 233 (430)
T ss_dssp ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT--------------------SCSEEEEEE-CSSCCCEEE
T ss_pred ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc--------------------eeeeeeecc-CCCceEEEE
Confidence 344556889999999954666655333 2333333220 111122221 223457889
Q ss_pred CC-CCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCC
Q 018235 238 NP-ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (359)
Q Consensus 238 sp-~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (359)
+| .+. ++++-...+.|..+++.. +.... .... +.......|+|+|++..++++-...+.|..++...
T Consensus 234 dp~~g~-lyv~d~~~~~V~~~~~~~-~~~~~-~~~~-~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 234 HPINGE-LYFNSWNAGQVFRYDFTT-QETTP-LFTI-QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp CTTTCC-EEEEETTTTEEEEEETTT-TEEEE-EEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred eCCCCE-EEEEECCCCEEEEEECCC-CcEEE-EEEc-CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 99 554 666666778999999865 32210 0111 12234678999999986677777888999987653
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.35 E-value=0.36 Score=46.95 Aligned_cols=82 Identities=10% Similarity=-0.036 Sum_probs=45.9
Q ss_pred CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCC-CEEEEEE
Q 018235 250 CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA-DVNVISW 328 (359)
Q Consensus 250 ~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~-~V~~i~~ 328 (359)
.+|.|..||+.+ ++.+ ..+. +...+........+. +++.++.||.|+.||.+++ +.+.++..... .-..+.+
T Consensus 442 ~~g~l~a~D~~t-G~~~---W~~~-~~~~~~~~~~~t~gg-~v~~g~~dg~l~a~D~~tG-~~lw~~~~~~~~~~~p~~~ 514 (571)
T 2ad6_A 442 EMGQIRAFDLTT-GKAK---WTKW-EKFAAWGGTLYTKGG-LVWYATLDGYLKALDNKDG-KELWNFKMPSGGIGSPMTY 514 (571)
T ss_dssp CCEEEEEECTTT-CCEE---EEEE-ESSCCCSBCEEETTT-EEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEE
T ss_pred CCCeEEEEECCC-CCEE---EEec-CCCCccceeEEECCC-EEEEEcCCCeEEEEECCCC-CEEEEEeCCCCcEeeeEEE
Confidence 357899999887 3322 1111 111111112222344 6666899999999999998 77777643221 1122345
Q ss_pred cCCCCeEEEE
Q 018235 329 NRCWLAVCWH 338 (359)
Q Consensus 329 s~~~~~l~~~ 338 (359)
..++++++..
T Consensus 515 ~~~G~~yv~~ 524 (571)
T 2ad6_A 515 SFKGKQYIGS 524 (571)
T ss_dssp EETTEEEEEE
T ss_pred EECCEEEEEE
Confidence 5677655543
No 290
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.10 E-value=0.38 Score=46.93 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=46.8
Q ss_pred CCcEEEEecCCCCc-ceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCC-EEEEEE
Q 018235 251 NSCIYLWEPASDAT-WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD-VNVISW 328 (359)
Q Consensus 251 dg~I~lwd~~~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~-V~~i~~ 328 (359)
+|.|..||+.++.. |.. ... ..+..-.....+. +++.++.|+.|+.||.+++ +.+.++...... ..-+.|
T Consensus 465 ~G~l~A~D~~tG~~~W~~---~~~---~~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG-~~lW~~~~~~g~~a~P~~y 536 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEH---KEH---LPLWAGVLATAGN-LVFTGTGDGYFKAFDAKSG-KELWKFQTGSGIVSPPITW 536 (582)
T ss_dssp SEEEEEECTTTCCEEEEE---EES---SCCCSCCEEETTT-EEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEE
T ss_pred cceEEEEECCCCCEEEEe---cCC---CCCcccceEeCCC-EEEEECCCCcEEEEECCCC-CEEEEecCCCCcccCceEE
Confidence 67899999987432 221 111 1111111112344 6777999999999999998 777777543221 122567
Q ss_pred cCCCCeEEEE
Q 018235 329 NRCWLAVCWH 338 (359)
Q Consensus 329 s~~~~~l~~~ 338 (359)
..+|+..+..
T Consensus 537 ~~~G~qYv~~ 546 (582)
T 1flg_A 537 EQDGEQYLGV 546 (582)
T ss_dssp EETTEEEEEE
T ss_pred EECCEEEEEE
Confidence 6778755443
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.00 E-value=3.1 Score=36.90 Aligned_cols=104 Identities=12% Similarity=0.166 Sum_probs=60.8
Q ss_pred CCCCceEEEEeCCCCCCeEEEEcCCCcEEE-EecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEE
Q 018235 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYL-WEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (359)
Q Consensus 227 ~h~~~v~~l~~sp~~~~~l~sgs~dg~I~l-wd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (359)
.+...++++.+.+.+. +++.+. .|.|.. +|- .+..|.. .-......+..+.+.|++. ++ .++.+|.+++..
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~g~-~G~~~~S~d~-gG~tW~~---~~~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~ 231 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGE-YVAVSS-RGSFYSTWEP-GQTAWEP---HNRTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSD 231 (327)
T ss_dssp SCCCCEEEEEECTTSC-EEEEET-TSSEEEEECT-TCSSCEE---EECCSSSCEEEEEECTTSC-EE-EEETTTEEEEEE
T ss_pred CCCcceEEEEEcCCCc-EEEEEC-CCcEEEEeCC-CCCceeE---CCCCCCCccceeEECCCCC-EE-EEeCCceEEEec
Confidence 3445788999999876 666665 555443 442 1234431 1123456788999999886 55 455678887764
Q ss_pred CCCCCCceEEee----cCCCCEEEEEEcCCCCeEEEEe
Q 018235 306 TRVGKSALTSFK----AHNADVNVISWNRCWLAVCWHL 339 (359)
Q Consensus 306 ~r~~~~~~~~~~----~h~~~V~~i~~s~~~~~l~~~~ 339 (359)
...+ ..-..+. .+...+..|.|.+.+.+++.+.
T Consensus 232 ~D~G-~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 232 PDNS-ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp TTEE-EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CCCC-CeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 2222 1111111 1223588899998777766553
No 292
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.86 E-value=0.84 Score=45.05 Aligned_cols=115 Identities=11% Similarity=0.025 Sum_probs=71.1
Q ss_pred eEEEeC-CCCcEEEEEeCCC-----------cEEEEECCCCccccccccccccCCCCCCCCCCCcEEec-CCCCceEEEE
Q 018235 170 RIRAMT-QNPHICASWADTG-----------HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGYAID 236 (359)
Q Consensus 170 ~i~~~p-~~~~~lat~s~dg-----------~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 236 (359)
.+++.+ .+ .+++.|+.+. .+.+||.... ....+..+. .+.....+++
T Consensus 190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-------------------~w~~~~~~~~~~~~~~~~~~ 249 (656)
T 1k3i_A 190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-------------------IVSDRTVTVTKHDMFCPGIS 249 (656)
T ss_dssp EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTC-------------------CBCCCEEEECSCCCSSCEEE
T ss_pred eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCC-------------------cEEeCcccCCCCCCcccccc
Confidence 556777 55 7877776542 5778887762 123333332 2333444677
Q ss_pred eCCCCCCeEEEEcC-CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEe-CC-----CcEEEEECCCC
Q 018235 237 WNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-VD-----GHIAIWDTRVG 309 (359)
Q Consensus 237 ~sp~~~~~l~sgs~-dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-~D-----g~I~iwD~r~~ 309 (359)
+..++. +++.|+. +..+.+||+.+ ..|... ..+...... ..++..+++. +++.|+ .+ ..+.+||..+.
T Consensus 250 ~~~~g~-lyv~GG~~~~~v~~yd~~t-~~W~~~-~~~~~~R~~-~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 250 MDGNGQ-IVVTGGNDAKKTSLYDSSS-DSWIPG-PDMQVARGY-QSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp ECTTSC-EEEECSSSTTCEEEEEGGG-TEEEEC-CCCSSCCSS-CEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTT
T ss_pred CCCCCC-EEEeCCCCCCceEEecCcC-CceeEC-CCCCccccc-cceEEecCCe-EEEEeCcccCCcccccceEeCCCCC
Confidence 788887 8888874 45799999987 566531 122211111 2345567887 888888 34 56999999875
No 293
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.77 E-value=3.7 Score=41.17 Aligned_cols=141 Identities=13% Similarity=0.044 Sum_probs=80.1
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC-----CCCceEEEEeCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-----HKDEGYAIDWNPI 240 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~ 240 (359)
..|.++...+++ .+.+. +. +-|.+|+.... ........ ....+.+|...+.
T Consensus 450 ~~v~~i~~d~~g-~lwig-t~-~Gl~~~~~~~~---------------------~~~~~~~~~~~~~~~~~i~~i~~d~~ 505 (781)
T 3v9f_A 450 LDVRVFYEDKNK-KIWIG-TH-AGVFVIDLASK---------------------KVIHHYDTSNSQLLENFVRSIAQDSE 505 (781)
T ss_dssp CCEEEEEECTTS-EEEEE-ET-TEEEEEESSSS---------------------SCCEEECTTTSSCSCSCEEEEEECTT
T ss_pred CeEEEEEECCCC-CEEEE-EC-CceEEEeCCCC---------------------eEEecccCcccccccceeEEEEEcCC
Confidence 567777777776 44433 34 45888887651 11111111 1346888888877
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecC-
Q 018235 241 TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH- 319 (359)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h- 319 (359)
+. |..|+..+-|..|+... ..+..-...-.-....|.++...+++. +.+ ++..|.|..||..+. ....+...
T Consensus 506 g~--lWigt~~~Gl~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi-~T~~Glv~~~d~~~~--~~~~~~~~~ 578 (781)
T 3v9f_A 506 GR--FWIGTFGGGVGIYTPDM-QLVRKFNQYEGFCSNTINQIYRSSKGQ-MWL-ATGEGLVCFPSARNF--DYQVFQRKE 578 (781)
T ss_dssp CC--EEEEESSSCEEEECTTC-CEEEEECTTTTCSCSCEEEEEECTTSC-EEE-EETTEEEEESCTTTC--CCEEECGGG
T ss_pred CC--EEEEEcCCCEEEEeCCC-CeEEEccCCCCCCCCeeEEEEECCCCC-EEE-EECCCceEEECCCCC--cEEEccccC
Confidence 75 55555544577788765 332210000001235789999988887 544 344666588888765 23344211
Q ss_pred ---CCCEEEEEEcCCCCeEEE
Q 018235 320 ---NADVNVISWNRCWLAVCW 337 (359)
Q Consensus 320 ---~~~V~~i~~s~~~~~l~~ 337 (359)
...|.++...++|.+.+.
T Consensus 579 gl~~~~i~~i~~d~~g~lW~~ 599 (781)
T 3v9f_A 579 GLPNTHIRAISEDKNGNIWAS 599 (781)
T ss_dssp TCSCCCCCEEEECSSSCEEEE
T ss_pred CCCCceEEEEEECCCCCEEEE
Confidence 235778888888775444
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.71 E-value=5.4 Score=39.98 Aligned_cols=155 Identities=12% Similarity=-0.007 Sum_probs=90.7
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec----------CCCCceEEE
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG----------GHKDEGYAI 235 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l 235 (359)
..|.++...+++ .+. .|+.++-|..++.... ....+. .....|.++
T Consensus 313 ~~v~~i~~D~~g-~lW-igt~~~Gl~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~v~~i 368 (781)
T 3v9f_A 313 ASARYIFQDSFN-NIW-IGTWGGGINFISNAPP----------------------TFHTWSYSPTQMNESSLSNKVVSSV 368 (781)
T ss_dssp SCEEEEEECSSC-CEE-EEEBSSCEEEECSSCC----------------------SCEEEC----CCCSSCCSSSCEEEE
T ss_pred CeEEEEEEeCCC-CEE-EEecCCeEEEeCCCCC----------------------cceeeccCccccccCCCCCcceEEE
Confidence 467788887777 333 3455566888876541 111110 123468888
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEE
Q 018235 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (359)
Q Consensus 236 ~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (359)
...+++ .|..|+.++-|.+|+..+ +....-..........|.++...+.+. +.+ |+.++.|..+|.+++ ....
T Consensus 369 ~~d~~g--~lWigt~~~Gl~~~~~~~-~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWi-gt~~~Gl~~~~~~~~--~~~~ 441 (781)
T 3v9f_A 369 CDDGQG--KLWIGTDGGGINVFENGK-RVAIYNKENRELLSNSVLCSLKDSEGN-LWF-GTYLGNISYYNTRLK--KFQI 441 (781)
T ss_dssp EECTTS--CEEEEEBSSCEEEEETTE-EEEECC-----CCCSBEEEEEECTTSC-EEE-EETTEEEEEECSSSC--EEEE
T ss_pred EEcCCC--CEEEEeCCCcEEEEECCC-CeEEEccCCCCCCCcceEEEEECCCCC-EEE-EeccCCEEEEcCCCC--cEEE
Confidence 887766 466677666788898764 222100000112346799999888876 444 666677888988764 2333
Q ss_pred ee---cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 316 FK---AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 316 ~~---~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
+. .....|.+|...+++.+.+... .+ |..++..++.
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g~lwigt~-----~G-l~~~~~~~~~ 480 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNKKIWIGTH-----AG-VFVIDLASKK 480 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTSEEEEEET-----TE-EEEEESSSSS
T ss_pred eccCCCCCCeEEEEEECCCCCEEEEEC-----Cc-eEEEeCCCCe
Confidence 32 1345789998888776544332 22 5566665543
No 295
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.67 E-value=2.7 Score=37.94 Aligned_cols=153 Identities=8% Similarity=0.022 Sum_probs=79.7
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCC---C
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI---T 241 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~---~ 241 (359)
-..-..++|.|++ .++++ ...|.|++++.... ..+. ..+ .+........+|+++|+ +
T Consensus 28 l~~P~~ia~~pdG-~l~V~-e~~g~I~~~d~~G~-~~~~---------------~~~--v~~~g~~g~~gia~~pdf~~~ 87 (354)
T 3a9g_A 28 LEVPWSIAPLGGG-RYLVT-ERPGRLVLISPSGK-KLVA---------------SFD--VANVGEAGLLGLALHPEFPKK 87 (354)
T ss_dssp CSCEEEEEEEETT-EEEEE-ETTTEEEEECSSCE-EEEE---------------ECC--CCCSTTCSEEEEEECTTTTTS
T ss_pred CCCCeEEEEcCCC-eEEEE-eCCCEEEEEeCCCc-eEee---------------ccc--eeecCCCceeeEEeCCCCCcC
Confidence 3556789999998 66665 45599998863220 0000 000 11112345789999997 4
Q ss_pred CCeEEEEcC----C----CcEEEEecCCCC-cc---eecCcccc-CCCCCeEEEEecCCCCCEEEEEeC-----------
Q 018235 242 TGRLVTGDC----N----SCIYLWEPASDA-TW---NVDPNPFI-GHSASVEDLQWSPTEPDVFASCSV----------- 297 (359)
Q Consensus 242 ~~~l~sgs~----d----g~I~lwd~~~~~-~~---~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~----------- 297 (359)
. .|..+.. + ..|..|+..... .. .+....+. +.......|.|.|++. ++++.+.
T Consensus 88 g-~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~ 165 (354)
T 3a9g_A 88 S-WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLS 165 (354)
T ss_dssp C-EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTT
T ss_pred C-EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCC
Confidence 3 4443332 2 567777765421 11 00001111 1112346799999997 7766443
Q ss_pred --CCcEEEEECCCCC-------CceEEeecCCCCEEEEEEcC-CCCeEEEEee
Q 018235 298 --DGHIAIWDTRVGK-------SALTSFKAHNADVNVISWNR-CWLAVCWHLE 340 (359)
Q Consensus 298 --Dg~I~iwD~r~~~-------~~~~~~~~h~~~V~~i~~s~-~~~~l~~~~~ 340 (359)
.|.|.-++....- .......+|.. .+.|+|+| .+.+++....
T Consensus 166 ~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 166 SLAGKILRVDEEGRPPADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp CCSSEEEEECTTSCCCTTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECC
T ss_pred CCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecC
Confidence 2445555543210 01111133433 56899999 6776666543
No 296
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.58 E-value=1.4 Score=42.79 Aligned_cols=55 Identities=16% Similarity=-0.032 Sum_probs=33.9
Q ss_pred CCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+|.|..||+.++ +.+.++... ..+........+..++.+.. ++.|..||..+|++
T Consensus 443 ~g~l~a~D~~tG-~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~----dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 443 MGQIRAFDLTTG-KAKWTKWEK-FAAWGGTLYTKGGLVWYATL----DGYLKALDNKDGKE 497 (571)
T ss_dssp CEEEEEECTTTC-CEEEEEEES-SCCCSBCEEETTTEEEEECT----TSEEEEEETTTCCE
T ss_pred CCeEEEEECCCC-CEEEEecCC-CCccceeEEECCCEEEEEcC----CCeEEEEECCCCCE
Confidence 578999999987 666665422 22222222323455555443 78899999888875
No 297
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.21 E-value=0.94 Score=44.91 Aligned_cols=72 Identities=13% Similarity=0.210 Sum_probs=44.3
Q ss_pred EEEecCCCCCEEEEEeCCC-------------------cEEEEECCCCCCceEEeec--CC-------CCEEEEEEcCCC
Q 018235 281 DLQWSPTEPDVFASCSVDG-------------------HIAIWDTRVGKSALTSFKA--HN-------ADVNVISWNRCW 332 (359)
Q Consensus 281 ~v~~sp~~~~~las~s~Dg-------------------~I~iwD~r~~~~~~~~~~~--h~-------~~V~~i~~s~~~ 332 (359)
.+++.|... ++..++.++ +|.-+|.+++ +.+..+.. |. .++.......++
T Consensus 234 ~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG-~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 234 SMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG-KLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC-CEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC-ceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 467888776 777777665 4999999998 66666643 22 222222222345
Q ss_pred C---eEEEEeeecccceEEEEEeCcCCcc
Q 018235 333 L---AVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 333 ~---~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+ .++.... ++.+.++|..+|++
T Consensus 312 ~~~~~v~~~~~----~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 312 KPRKVLMQAPK----NGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEEEECCT----TSEEEEEETTTCCE
T ss_pred cEEEEEEEECC----CCEEEEEECCCCCE
Confidence 4 3333333 77888888888764
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.81 E-value=3.2 Score=37.59 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=58.1
Q ss_pred CceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC-CCCCEEEEEeCC-CcEEEEECC
Q 018235 230 DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVD-GHIAIWDTR 307 (359)
Q Consensus 230 ~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~D-g~I~iwD~r 307 (359)
..-++|+|||++..++++-+..+.|+.|++...+... ..+.+ ......-.++..+ +|. +.+++.-+ +.|..|+..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~-~~~~~-~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLT-PLRVL-SFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEE-EEEEE-ECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCTT
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEe-cCEEE-eCCCCCceEEEeCCCCc-EEEEecCCceEEEEECCC
Confidence 3567999999998455555667899999987534322 11233 2235567788888 587 77766533 344444443
Q ss_pred CC-CCceEEeec---CCCCEEEEEEcCCCCeE
Q 018235 308 VG-KSALTSFKA---HNADVNVISWNRCWLAV 335 (359)
Q Consensus 308 ~~-~~~~~~~~~---h~~~V~~i~~s~~~~~l 335 (359)
.. ...+..+.. -...|+++ |..+|+.+
T Consensus 298 ~~~~s~v~rI~~~~~~~~~v~~v-~~ddG~~l 328 (355)
T 3sre_A 298 NPPGSEVLRIQDILSEEPKVTVV-YAENGTVL 328 (355)
T ss_dssp SCCCEEEEEEECTTSSSCEEEEE-EEECSSSC
T ss_pred CCCCCEEEEEEccCCCCcEEEEE-EEcCCCEE
Confidence 21 133444431 22334444 44466543
No 299
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.71 E-value=3.1 Score=40.63 Aligned_cols=55 Identities=13% Similarity=-0.009 Sum_probs=32.0
Q ss_pred CCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
.|.|.-||++++ +.+.+... ..+++.-.....+.++..+.. ++.|+.+|..+|++
T Consensus 452 ~G~l~A~D~~tG-~~~W~~~~-~~~~~~g~~~tagg~vf~gt~----dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 452 LGQIKAYNAITG-DYKWEKME-RFAVWGGTMATAGDLVFYGTL----DGYLKARDSDTGDL 506 (599)
T ss_dssp CEEEEEECTTTC-CEEEEEEE-SSCCCSBCEEETTTEEEEECT----TSEEEEEETTTCCE
T ss_pred cCeEEEEECCCC-CEEeEecC-CCCccCcceEecCCEEEEECC----CCeEEEEECCCCCE
Confidence 477888999887 55555531 112211111223445555443 78899999888874
No 300
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.35 E-value=3.7 Score=39.83 Aligned_cols=55 Identities=16% Similarity=0.052 Sum_probs=34.1
Q ss_pred CCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
+|.|.-||++++ +.+.++.... +++.-.....+.+++.+.. ++.|+.||.++|++
T Consensus 465 ~G~l~A~D~~tG-~~~W~~~~~~-~~~~g~~~tagglvf~g~~----dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSG-KVVWEHKEHL-PLWAGVLATAGNLVFTGTG----DGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTC-CEEEEEEESS-CCCSCCEEETTTEEEEECT----TSEEEEEETTTCCE
T ss_pred cceEEEEECCCC-CEEEEecCCC-CCcccceEeCCCEEEEECC----CCcEEEEECCCCCE
Confidence 688999999998 6665554322 2221111223455555543 78899999998874
No 301
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.31 E-value=5.8 Score=37.16 Aligned_cols=112 Identities=10% Similarity=0.043 Sum_probs=59.0
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEec------CCCCceEEEEeC
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG------GHKDEGYAIDWN 238 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~s 238 (359)
-..-+.++|.|++ .++++-...+.|++++..... ...+..+. .......+|+|+
T Consensus 26 l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~-------------------~~~~~~~~~~~~~~~g~~Gllgia~~ 85 (454)
T 1cru_A 26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGS-------------------VKTVFQVPEIVNDADGQNGLLGFAFH 85 (454)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCC-------------------EEEEEECTTCCCCTTSSCSEEEEEEC
T ss_pred CCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCc-------------------EeEEecCCccccccCCCCceeEEEEC
Confidence 3456799999999 677765444578888754210 01111111 123467799999
Q ss_pred CC---CCCeEEEEcC------------CCcEEEEecCCCC-cc---eecCcccc-CCCCCeEEEEecCCCCCEEEEEeC
Q 018235 239 PI---TTGRLVTGDC------------NSCIYLWEPASDA-TW---NVDPNPFI-GHSASVEDLQWSPTEPDVFASCSV 297 (359)
Q Consensus 239 p~---~~~~l~sgs~------------dg~I~lwd~~~~~-~~---~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~ 297 (359)
|+ +..+.++-+. ...|.-|+..... .. .+....+. ........|.|.|++. ++++.+.
T Consensus 86 Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd 163 (454)
T 1cru_A 86 PDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGD 163 (454)
T ss_dssp TTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECC
T ss_pred CCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECC
Confidence 95 4313343321 2345555553211 11 00001111 1123578999999998 6666543
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.27 E-value=7.3 Score=36.35 Aligned_cols=161 Identities=16% Similarity=0.172 Sum_probs=96.3
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC----CceEEEEeCCC
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK----DEGYAIDWNPI 240 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~sp~ 240 (359)
...|.--+|-... .++-.+ +..|+-|++.. ...|+..|..|. ..|....-+++
T Consensus 105 ~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~--------------------~s~P~kvFdR~~~L~~~QIInY~~d~~ 161 (494)
T 1bpo_A 105 TDDVTFWKWISLN--TVALVT-DNAVYHWSMEG--------------------ESQPVKMFDRHSSLAGCQIINYRTDAK 161 (494)
T ss_dssp SSCCCEEEEEETT--EEEEEC-SSEEEEEESSS--------------------SCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred CCCceEEEecCCC--eEEEEc-CCeeEEecccC--------------------CCCchhheecchhcccceEEEEEECCC
Confidence 4566666775544 444433 46799999876 357777777664 35667777888
Q ss_pred CCCeEEEEc------CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC--CCCEEEEEeCC---CcEEEEECCCC
Q 018235 241 TTGRLVTGD------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVD---GHIAIWDTRVG 309 (359)
Q Consensus 241 ~~~~l~sgs------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~D---g~I~iwD~r~~ 309 (359)
..-++++|- -.|.+.||.....- .+.+.||.+.-..+...-+ ...+|+.+... +.++|.++...
T Consensus 162 ~kW~~l~GI~~~~~~v~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~ 236 (494)
T 1bpo_A 162 QKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (494)
T ss_dssp SSEEEEEEEEEETTEEEEEEEEEESTTCC-----EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCC
T ss_pred CCeEEEEeecccCCcccceEEEeeccccc-----cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 774444443 34778899886522 2678888766655544322 12256655543 78999998543
Q ss_pred --CC-c----eEEe----ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 310 --KS-A----LTSF----KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 310 --~~-~----~~~~----~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
.. + ...+ .+-...--++..++.-.++..-.. -+.+.++|..+|.
T Consensus 237 ~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK----~G~i~lyDleTgt 291 (494)
T 1bpo_A 237 PTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK----YGYIHLYDLETGT 291 (494)
T ss_dssp CTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET----TSEEEEEETTTCC
T ss_pred ccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec----CceEEEEecccce
Confidence 01 1 1111 112333456677766555544433 6778889988875
No 303
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.21 E-value=4.1 Score=43.13 Aligned_cols=180 Identities=16% Similarity=0.177 Sum_probs=103.6
Q ss_pred eeeChhHhhhhhcccccCc--ceeEEEEeccCCCCcccCCceEEEEEeecCCC-----CCCceEEEEEeeccCCcccCCC
Q 018235 50 LQCDPTAYNSLHAFHIGWP--CLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEK-----PSWNSIGVFKVSNISGKRRELV 122 (359)
Q Consensus 50 l~~~~~~Y~~~~~~~~~wP--~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~-----~~~n~l~i~~~~~l~~~~~~~~ 122 (359)
..+||..++.++.+.++-- ++|+..+. +...+ ..|+++||--.. ...+.|+|+++.+
T Consensus 810 ~lidp~t~~~i~~~~l~~nE~~~sv~~v~--~~~~~-----~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~--------- 873 (1158)
T 3ei3_A 810 LIIDQHTFEVLHAHQFLQNEYALSLVSCK--LGKDP-----NTYFIVGTAMVYPEEAEPKQGRIVVFQYSD--------- 873 (1158)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEEC--CTTCC-----CCEEEEEEEECCTTCSSCCCEEEEEEEEET---------
T ss_pred EEEeCCCCeEEEEEeCCCCcceEEEEEEE--EccCC-----CEEEEEEeeecCCCCCCCCceEEEEEEEEC---------
Confidence 4566666666666665532 33444332 11111 258999995432 2578999999940
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 018235 123 PNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNAL 202 (359)
Q Consensus 123 ~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~ 202 (359)
...........+|+|.+++-.. | .++|+.+ .+|++|++...
T Consensus 874 -------------------------------~kL~lv~~~~v~g~v~al~~~~-g-~Lla~ig--~~l~vy~l~~~---- 914 (1158)
T 3ei3_A 874 -------------------------------GKLQTVAEKEVKGAVYSMVEFN-G-KLLASIN--STVRLYEWTTE---- 914 (1158)
T ss_dssp -------------------------------TEEEEEEEEEESSCEEEEEEET-T-EEEEEET--TEEEEEEECTT----
T ss_pred -------------------------------CEEEEEEEEEcCCcCEEEeeeC-C-EEEEEcC--CEEEEEECCCC----
Confidence 1122233345689999988664 4 5666544 78999999761
Q ss_pred ccccccccCCCCCCCCCCCcE-EecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccc--cCCCCCe
Q 018235 203 AESETIVGQGAPQVSNQSPLV-KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF--IGHSASV 279 (359)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~--~~h~~~V 279 (359)
+.+. ....+. .+..+.....+. +++.|+.-..|.+...+.....+ ..+ .-+...+
T Consensus 915 -----------------~~L~~~~~~~~-~i~~~~l~~~~~-~I~vgD~~~Sv~~~~y~~~~~~L---~~~a~D~~~~~v 972 (1158)
T 3ei3_A 915 -----------------KELRTECNHYN-NIMALYLKTKGD-FILVGDLMRSVLLLAYKPMEGNF---EEIARDFNPNWM 972 (1158)
T ss_dssp -----------------SCEEEEEEECC-CSCEEEEEEETT-EEEEEESSBCEEEEEEETTTTEE---EEEEECCSCBCE
T ss_pred -----------------ceEEEEeeccc-cEEEEEEeccCC-EEEEEEhhheEEEEEEEcCCCeE---EEEEeecccccE
Confidence 1111 111111 122323322454 89999988888876554322222 112 1244567
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEECCC
Q 018235 280 EDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (359)
Q Consensus 280 ~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (359)
+++.+--.+ .++.+..+|.|.+.....
T Consensus 973 ta~~~ld~~--t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 973 SAVEILDDD--NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEEETT--EEEEEETTSEEEEEEECT
T ss_pred EEEEEEccC--cEEEEcCCCcEEEEecCC
Confidence 888776544 577788999999886654
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=91.87 E-value=4.4 Score=36.43 Aligned_cols=151 Identities=7% Similarity=0.049 Sum_probs=79.1
Q ss_pred ceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCC---CCC
Q 018235 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI---TTG 243 (359)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~---~~~ 243 (359)
.-+.++|.|++ .++++ ...|.|++++ ......+. ..+ .+........+|+++|+ +..
T Consensus 32 ~P~~ia~~pdG-~l~V~-e~~g~I~~i~-~g~~~~~~---------------~~~--v~~~g~~~p~gia~~pdf~~~g~ 91 (352)
T 2ism_A 32 VPWALAFLPDG-GMLIA-ERPGRIRLFR-EGRLSTYA---------------ELS--VYHRGESGLLGLALHPRFPQEPY 91 (352)
T ss_dssp CEEEEEECTTS-CEEEE-ETTTEEEEEE-TTEEEEEE---------------ECC--CCCSTTCSEEEEEECTTTTTSCE
T ss_pred CceEEEEcCCC-eEEEE-eCCCeEEEEE-CCCccEee---------------cce--EeecCCCCceeEEECCCCCCCCE
Confidence 45689999999 56665 4559999998 32100000 001 11122346789999998 431
Q ss_pred eEEEEcCC-----CcEEEEecCCCCcc---eecCcccc---CCCCCeEEEEecCCCCCEEEEEeC-------------CC
Q 018235 244 RLVTGDCN-----SCIYLWEPASDATW---NVDPNPFI---GHSASVEDLQWSPTEPDVFASCSV-------------DG 299 (359)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~---~~~~~~~~---~h~~~V~~v~~sp~~~~~las~s~-------------Dg 299 (359)
++++-... +.|..|+... ... ......+. +.......+.|.|++. ++++.+. .|
T Consensus 92 lYv~~~~~~~~~~~~v~r~~~~~-~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g 169 (352)
T 2ism_A 92 VYAYRTVAEGGLRNQVVRLRHLG-ERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGG 169 (352)
T ss_dssp EEEEEEECTTSSEEEEEEEEECS-SCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSS
T ss_pred EEEEEecCCCCCccEEEEEEeCC-CCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCce
Confidence 44443322 5677787753 211 00001121 1112236899999997 7776542 14
Q ss_pred cEEEEECCCC------------CCceEEeecCCCCEEEEEEcC-CCCeEEEEee
Q 018235 300 HIAIWDTRVG------------KSALTSFKAHNADVNVISWNR-CWLAVCWHLE 340 (359)
Q Consensus 300 ~I~iwD~r~~------------~~~~~~~~~h~~~V~~i~~s~-~~~~l~~~~~ 340 (359)
.|.-++.... ........+|. ..+.++|+| .+.+++....
T Consensus 170 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 170 KILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp EEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEEC
T ss_pred EEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcC
Confidence 5555555431 01111112332 256789999 6776666543
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.54 E-value=4.3 Score=37.68 Aligned_cols=127 Identities=9% Similarity=0.100 Sum_probs=75.6
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC------CCCceEEEEeCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG------HKDEGYAIDWNP 239 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp 239 (359)
+.|..+..+|.| .++|..+ +..|.|-.+.............. ..+ .+++.- ...+|..+.|||
T Consensus 66 ~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~--------~~q-~~ty~l~~~~~~~~s~I~qVlWHP 134 (452)
T 3pbp_A 66 DDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD--------AFQ-IFHYSIDEEEVGPKSSIKKVLFHP 134 (452)
T ss_dssp CTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHH--------TTE-EEEEEGGGCC--CCCCEEEEEECT
T ss_pred CceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCccccccc--------ccc-eeEEEcCCcccCCCCceeEEEecc
Confidence 367889999999 7777754 56899999884221111100000 001 122221 346899999999
Q ss_pred CCCC--eEEEEcCCCcEEEEecCCCCc-ce-e--cCc--cccCCCCCeEEEEecCCCCCEEEE-EeCCCcEEE
Q 018235 240 ITTG--RLVTGDCNSCIYLWEPASDAT-WN-V--DPN--PFIGHSASVEDLQWSPTEPDVFAS-CSVDGHIAI 303 (359)
Q Consensus 240 ~~~~--~l~sgs~dg~I~lwd~~~~~~-~~-~--~~~--~~~~h~~~V~~v~~sp~~~~~las-~s~Dg~I~i 303 (359)
.+.. .|++-..|++|++||+..... +. . ... .+..+...|.+++|.+.+-++.+. .+..|-|.-
T Consensus 135 l~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 135 KSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 8653 789999999999999976221 11 0 001 111233678899999876644332 335666654
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.35 E-value=7.8 Score=34.75 Aligned_cols=162 Identities=16% Similarity=0.161 Sum_probs=93.2
Q ss_pred CCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCC----CceEEEEeCCC
Q 018235 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK----DEGYAIDWNPI 240 (359)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~sp~ 240 (359)
...|.--+|-... .++-.+ +..|+-|++.. ...|+..|..|. ..|....-+++
T Consensus 106 ~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~--------------------~s~P~kvFdR~~~L~~~QIInY~~d~~ 162 (365)
T 2xzh_A 106 TDDVTFWKWISLN--TVALVT-DNAVYHWSMEG--------------------ESQPVKMFDRHSSLAGCQIINYRTDAK 162 (365)
T ss_dssp SSCEEEEEECSSS--EEEEEE-SSEEEEEESST--------------------TCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred CCccEEEEecCCC--eEEEEc-CCcEEEEcccC--------------------CCCCceeeecchhcccceEEEEEECCC
Confidence 4566666776554 333333 35799999876 356777777664 35667777887
Q ss_pred CCCeEEEEc------CCCcEEEEecCCCCcceecCccccCCCCCeEEEEecC--CCCCEEEEEeCC---CcEEEEECCCC
Q 018235 241 TTGRLVTGD------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP--TEPDVFASCSVD---GHIAIWDTRVG 309 (359)
Q Consensus 241 ~~~~l~sgs------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp--~~~~~las~s~D---g~I~iwD~r~~ 309 (359)
..-++++|- -.|.+.||..... . .+.+.||.+.-..+...- ....+|+-+... +.++|.++...
T Consensus 163 ~kW~~l~GI~~~~~~v~G~mQLYS~er~--~---sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 163 QKWLLLTGISAQQNRVVGAMQLYSVDRK--V---SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 237 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEEETTTT--E---EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSC
T ss_pred CCEEEEEeEeccCCccceeEEEEeeccc--c---cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 774445543 2477889988652 2 266788866554443322 122245544432 58999998543
Q ss_pred --CCc-----eEEe----ecCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCcc
Q 018235 310 --KSA-----LTSF----KAHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGEI 358 (359)
Q Consensus 310 --~~~-----~~~~----~~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~v 358 (359)
..+ ...+ .+-....-++..++.-.++..-.. -+.+.++|..+|..
T Consensus 238 ~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK----~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 238 PTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK----YGYIHLYDLETGTC 293 (365)
T ss_dssp CTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEET----TSEEEEEETTTCCE
T ss_pred CCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeC----CcEEEEEEcccCcE
Confidence 111 1111 112333445666665554444433 67789999888763
No 307
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=90.96 E-value=2.1 Score=41.83 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=45.7
Q ss_pred CCCcEEEEecCCCCc-ceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCC-CEEEEE
Q 018235 250 CNSCIYLWEPASDAT-WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA-DVNVIS 327 (359)
Q Consensus 250 ~dg~I~lwd~~~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~-~V~~i~ 327 (359)
..|.|..||+.++.. |.. .. + .++..-.....+. ++..++.|+.|+.||.+++ +.+.++..... ...-+.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~---~~-~--~~~~~g~~~tagg-~vf~gt~dg~l~A~D~~tG-~~lW~~~l~~g~~~~P~~ 522 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEK---ME-R--FAVWGGTMATAGD-LVFYGTLDGYLKARDSDTG-DLLWKFKIPSGAIGYPMT 522 (599)
T ss_dssp CCEEEEEECTTTCCEEEEE---EE-S--SCCCSBCEEETTT-EEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEE
T ss_pred CcCeEEEEECCCCCEEeEe---cC-C--CCccCcceEecCC-EEEEECCCCeEEEEECCCC-CEEEEeeCCCCcEeccEE
Confidence 357888889877322 221 11 1 1111111122344 6666899999999999998 77777643321 122356
Q ss_pred EcCCCCeEEEE
Q 018235 328 WNRCWLAVCWH 338 (359)
Q Consensus 328 ~s~~~~~l~~~ 338 (359)
|..+|+..+..
T Consensus 523 y~~~G~qyv~~ 533 (599)
T 1w6s_A 523 YTHKGTQYVAI 533 (599)
T ss_dssp EEETTEEEEEE
T ss_pred EEeCCEEEEEE
Confidence 66677754443
No 308
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.65 E-value=1 Score=44.42 Aligned_cols=117 Identities=9% Similarity=-0.056 Sum_probs=68.7
Q ss_pred EEEeCC-CCCCeEEEEcCCC-----------cEEEEecCCCCcceecCccc-cCCCCCeEEEEecCCCCCEEEEEe-CCC
Q 018235 234 AIDWNP-ITTGRLVTGDCNS-----------CIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCS-VDG 299 (359)
Q Consensus 234 ~l~~sp-~~~~~l~sgs~dg-----------~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s-~Dg 299 (359)
+.++.+ .+. +++.|+.+. .+.+||+.+ ++|.. ...+ ..+......+++.+++. +++.|+ .+.
T Consensus 190 ~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t-~~w~~-~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~ 265 (656)
T 1k3i_A 190 AAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPST-GIVSD-RTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAK 265 (656)
T ss_dssp EEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTT-CCBCC-CEEEECSCCCSSCEEEECTTSC-EEEECSSSTT
T ss_pred eEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCC-CcEEe-CcccCCCCCCccccccCCCCCC-EEEeCCCCCC
Confidence 556666 665 777776543 588999987 55542 1122 12333344567778888 888888 456
Q ss_pred cEEEEECCCCCCceEEee-cCCCC-EEEEEEcCCCCeEEEEeeec-c-cceEEEEEeCcCC
Q 018235 300 HIAIWDTRVGKSALTSFK-AHNAD-VNVISWNRCWLAVCWHLEVM-M-EHFLFMILDCSRG 356 (359)
Q Consensus 300 ~I~iwD~r~~~~~~~~~~-~h~~~-V~~i~~s~~~~~l~~~~~~~-~-~d~~i~iwd~~~g 356 (359)
.+.+||..+. . -..+. .+... -.++...+++++++++.... . ....+.+||+.++
T Consensus 266 ~v~~yd~~t~-~-W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 266 KTSLYDSSSD-S-WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp CEEEEEGGGT-E-EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ceEEecCcCC-c-eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 8999998875 2 11111 11111 12345556888888876321 1 1245778887664
No 309
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.30 E-value=9.9 Score=34.19 Aligned_cols=154 Identities=10% Similarity=0.045 Sum_probs=82.1
Q ss_pred CCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEE----ecCCCCceEEEEeCC
Q 018235 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK----FGGHKDEGYAIDWNP 239 (359)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~l~~sp 239 (359)
--..-+.|+|.|++ .++++-...|.|++++..... ..++.. +........+|+++|
T Consensus 30 gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~-------------------~~~v~~~~~v~~~g~~GllGia~~P 89 (347)
T 3das_A 30 GLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGR-------------------KTELGEVPGVSPSGEGGLLGIALSP 89 (347)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCC-------------------EEEEEECTTCCCBTTBSEEEEEECT
T ss_pred CCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCc-------------------EeeecccCceeecCCCCceeeEecc
Confidence 34667899999999 677776558999988754310 011111 122234678999999
Q ss_pred C--CCCeEEEE---cCCCcEEEEecCCCC----c---ceecCcccc-CCCCCeEEEEecCCCCCEEEEEeC---------
Q 018235 240 I--TTGRLVTG---DCNSCIYLWEPASDA----T---WNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSV--------- 297 (359)
Q Consensus 240 ~--~~~~l~sg---s~dg~I~lwd~~~~~----~---~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~--------- 297 (359)
+ ..+.|... ..++.|.-|.+.... . ..+....+. +....-..|.|.|++. ++++.+.
T Consensus 90 df~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd 168 (347)
T 3das_A 90 DYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQD 168 (347)
T ss_dssp THHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTC
T ss_pred ccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccC
Confidence 6 11244332 234566666554310 1 100001111 1112345799999997 7777542
Q ss_pred ----CCcEEEEECCCC--------CCceEEeecCCCCEEEEEEcCCCCeEEEEee
Q 018235 298 ----DGHIAIWDTRVG--------KSALTSFKAHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 298 ----Dg~I~iwD~r~~--------~~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
-|.|.-.+.... ...+. -.+|.. ...++|+|++.+.+....
T Consensus 169 ~~~~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d~g 221 (347)
T 3das_A 169 RKSLGGKILRMTPDGEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFASEFG 221 (347)
T ss_dssp TTCSTTCEEEECTTSSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEEECC
T ss_pred CCCCCCEEEEEeCCCCccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEEecC
Confidence 244444444321 01111 134433 567899998887666543
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.86 E-value=12 Score=33.56 Aligned_cols=154 Identities=10% Similarity=0.030 Sum_probs=78.6
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCC---CC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI---TT 242 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~---~~ 242 (359)
..-..|+|.|++..++++ ...|.|++++........ . ...+ ..+.........|+++|+ +.
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~--~------------~~~~-~v~~~g~~g~~gia~~pdf~~~g 81 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAP--L------------SGVP-DVWAHGQGGLLDVVLAPDFAQSR 81 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCC--C------------BSCC-CCCCSTTCSEEEEEECTTHHHHC
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeE--e------------cCCc-ccccCCCCCceeEEECCCCCCCC
Confidence 345789999999326655 457999999853311000 0 0011 011122335679999996 33
Q ss_pred CeEEEEcC-------CCcEEEEecCCCC-cc-----eecCcc---ccCCCCCeEEEEecCCCCCEEEEEeCC--------
Q 018235 243 GRLVTGDC-------NSCIYLWEPASDA-TW-----NVDPNP---FIGHSASVEDLQWSPTEPDVFASCSVD-------- 298 (359)
Q Consensus 243 ~~l~sgs~-------dg~I~lwd~~~~~-~~-----~~~~~~---~~~h~~~V~~v~~sp~~~~~las~s~D-------- 298 (359)
.++++-.. ...|..|++.... .. +....+ ...|. -..|.|.|++. ++++.+..
T Consensus 82 ~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~ 158 (353)
T 2g8s_A 82 RIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGY-LFIALGENNQRPTAQD 158 (353)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSE-EEEEECCTTCGGGGGC
T ss_pred EEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCc-EEEEECCCCCCCccCC
Confidence 14444222 2356666664321 11 100011 11232 35699999997 66665432
Q ss_pred -----CcEEEEECCCC-------------CCceEEeecCCCCEEEEEEcC-CCCeEEEEee
Q 018235 299 -----GHIAIWDTRVG-------------KSALTSFKAHNADVNVISWNR-CWLAVCWHLE 340 (359)
Q Consensus 299 -----g~I~iwD~r~~-------------~~~~~~~~~h~~~V~~i~~s~-~~~~l~~~~~ 340 (359)
|.|.-++.... ...+.. .+|. ..+.++|+| .+.+.+....
T Consensus 159 ~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~r-np~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 159 LDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS-YGIR-NPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp TTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE-ECCS-EEEEEEEETTTTEEEEEEEC
T ss_pred CCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE-EcCc-CccceEEECCCCCEEEEecC
Confidence 45666665432 011111 2333 267899999 6766665543
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=88.37 E-value=4.3 Score=36.45 Aligned_cols=107 Identities=13% Similarity=0.121 Sum_probs=61.5
Q ss_pred CCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC---CCCEEEEEeCC-----Cc
Q 018235 229 KDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVD-----GH 300 (359)
Q Consensus 229 ~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---~~~~las~s~D-----g~ 300 (359)
-..-.+|+|.|++. ++++ ...|.|++++ ......+.....+.........|+|+|+ +..++++.... ..
T Consensus 30 l~~P~~ia~~pdG~-l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSC-EEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCe-EEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34567999999986 5554 5579999998 2211111111112223457899999998 44366665543 56
Q ss_pred EEEEECCCCC----CceEE-eec---CCCCEEEEEEcCCCCeEEEE
Q 018235 301 IAIWDTRVGK----SALTS-FKA---HNADVNVISWNRCWLAVCWH 338 (359)
Q Consensus 301 I~iwD~r~~~----~~~~~-~~~---h~~~V~~i~~s~~~~~l~~~ 338 (359)
|..++..... +.+.. +.. .......|.|.|+|.+.+..
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 7777766420 11222 221 11124689999999765553
No 312
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.08 E-value=6.7 Score=35.07 Aligned_cols=75 Identities=7% Similarity=-0.043 Sum_probs=50.5
Q ss_pred ceEEEEeCCCCCCeEEEEcCC-CcEEEEecCCCCcceec---CccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 231 EGYAIDWNPITTGRLVTGDCN-SCIYLWEPASDATWNVD---PNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~d-g~I~lwd~~~~~~~~~~---~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
....++..++|+ ..++++.. +.|...+... +.... ..+........+.|+++|++. +|+.....|.|.-+|+
T Consensus 138 ~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 138 GVVQSAQDRDGN-SYVAFALGMPAIARVSADG--KTVSTFAWESGNGGQRPGYSGITFDPHSN-KLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEEEEEECTTSC-EEEEEEESSCEEEEECTTS--CCEEEEEECCCCSSSCCSCSEEEEETTTT-EEEEESSSSSEEEEEC
T ss_pred CCceeEECCCCC-EEEeCCCCCCeEEEEeCCC--CEEeeeeecCCCcccccCcceEEEeCCCC-EEEEEcCCCeEEEEcC
Confidence 467899999998 88888877 7777777643 21110 011112233467899999998 5555544999999999
Q ss_pred CCC
Q 018235 307 RVG 309 (359)
Q Consensus 307 r~~ 309 (359)
+..
T Consensus 214 ~~p 216 (334)
T 2p9w_A 214 SKP 216 (334)
T ss_dssp SSS
T ss_pred CCC
Confidence 854
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=86.03 E-value=6 Score=35.58 Aligned_cols=107 Identities=10% Similarity=-0.035 Sum_probs=60.7
Q ss_pred CCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCC---CCCEEEEEeC---C----
Q 018235 229 KDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSV---D---- 298 (359)
Q Consensus 229 ~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---~~~~las~s~---D---- 298 (359)
-..-.+|+|.|++. |+.+..+|.|++++. .+...+.....+.........|+|+|+ +..++++-+. +
T Consensus 28 l~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR--YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTE--EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 34567999999985 444556799999874 322111111111222356889999997 4436666543 3
Q ss_pred CcEEEEECCCCC------CceEE-eec-CCCCEEEEEEcCCCCeEEEE
Q 018235 299 GHIAIWDTRVGK------SALTS-FKA-HNADVNVISWNRCWLAVCWH 338 (359)
Q Consensus 299 g~I~iwD~r~~~------~~~~~-~~~-h~~~V~~i~~s~~~~~l~~~ 338 (359)
..|..|+..... +.+.. +.. .....+.|.|.|+|.+++..
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 567777765420 11111 221 11124679999999866653
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=85.51 E-value=15 Score=30.82 Aligned_cols=153 Identities=8% Similarity=0.008 Sum_probs=79.3
Q ss_pred EEecCC--CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCC-ccccccccccccCCCCCCCCCCCcEEecCCCC--ceEE
Q 018235 160 RKVAHQ--GCVNRIRAMTQNPHICASWADTGHVQVWDLRSH-LNALAESETIVGQGAPQVSNQSPLVKFGGHKD--EGYA 234 (359)
Q Consensus 160 ~~~~H~--~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~ 234 (359)
+.+++. ..+..++|+|++ .+.|. .+|.++-.+.... ...+. .. .+..+... .--+
T Consensus 33 ~~iG~~gw~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~----------------~s-~t~IG~~Gw~~F~a 92 (236)
T 1tl2_A 33 TLIGKGGWSNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWM----------------GR-AKKIGNGGWNQFQF 92 (236)
T ss_dssp EEEESSSCTTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHH----------------HH-CEEEECSCGGGCSE
T ss_pred cccCccccccceeEEECCCc-cEEEE--eCCeEEEECCCCCCccccc----------------cc-ccEecccccccceE
Confidence 344552 477899999988 56665 6676555543221 00000 00 11111111 1357
Q ss_pred EEeCCCCCCeEEEEcCCCcEEEEecCC--CCcceecCccccC-CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 235 IDWNPITTGRLVTGDCNSCIYLWEPAS--DATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 235 l~~sp~~~~~l~sgs~dg~I~lwd~~~--~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
+-|.|++. +.++ .||.|+-++..+ ...|+.....+.. -=..+..|.+.|++. +.|.. |+.+.-+-.-+...
T Consensus 93 ~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~ 166 (236)
T 1tl2_A 93 LFFDPNGY-LYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQ 166 (236)
T ss_dssp EEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTT
T ss_pred EEECCCCC-EEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCC
Confidence 88999886 5555 469998888743 2334321111111 114679999999997 66555 77754322221100
Q ss_pred -----ceEEee-cCCCCEEEEEEcCCCCeEEEE
Q 018235 312 -----ALTSFK-AHNADVNVISWNRCWLAVCWH 338 (359)
Q Consensus 312 -----~~~~~~-~h~~~V~~i~~s~~~~~l~~~ 338 (359)
....+. ..-..-..+.|.+++.+.+..
T Consensus 167 ~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 167 DNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp CCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred cccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 111111 222233446688888776665
No 315
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=84.81 E-value=16 Score=32.82 Aligned_cols=133 Identities=14% Similarity=0.172 Sum_probs=80.1
Q ss_pred CceeeEEE--eCCC-CcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCCCCC
Q 018235 166 GCVNRIRA--MTQN-PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (359)
Q Consensus 166 ~~V~~i~~--~p~~-~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 242 (359)
..+..+++ +|.. ..+++....+|.+..|++....... ...+.+.+|..- ..+.++...+...
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~--------------~~~~lVR~f~lg-sq~EgcvvDd~~g 192 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY--------------ISGKKVRAFKMN-SQTEGMAADDEYG 192 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC--------------EEEEEEEEEECS-SCEEEEEEETTTT
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc--------------ccceEEEEecCC-CCcceEEEcCCCC
Confidence 45666676 6643 3356666788999999986421100 013445666543 3667777777665
Q ss_pred CeEEEEcCCCcEEEEecCCCC--c-ceecCccc-cCC-CCCeEEEEe--cCCCC-CEEEEEeCCCcEEEEECCCCCCceE
Q 018235 243 GRLVTGDCNSCIYLWEPASDA--T-WNVDPNPF-IGH-SASVEDLQW--SPTEP-DVFASCSVDGHIAIWDTRVGKSALT 314 (359)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~--~-~~~~~~~~-~~h-~~~V~~v~~--sp~~~-~~las~s~Dg~I~iwD~r~~~~~~~ 314 (359)
+|+.+-.+.-|..++..... . ..+ ..+ .++ ...++.|+. .+++. .+|+|+-.+.++.+||.....+.+.
T Consensus 193 -~Lyv~eEd~GIw~~da~p~~~~~~~~v--~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg 269 (355)
T 3amr_A 193 -RLYIAEEDEAIWKFSAEPDGGSNGTVI--DRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVA 269 (355)
T ss_dssp -EEEEEETTTEEEEEECSTTSCSCCEEE--EEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEE
T ss_pred -eEEEecccceEEEEeCCcCCCCCceEE--EEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEE
Confidence 89999888666666643211 1 111 112 122 347898888 45544 4777777889999999973324444
Q ss_pred Ee
Q 018235 315 SF 316 (359)
Q Consensus 315 ~~ 316 (359)
.+
T Consensus 270 ~f 271 (355)
T 3amr_A 270 DF 271 (355)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.63 E-value=27 Score=37.75 Aligned_cols=160 Identities=17% Similarity=0.169 Sum_probs=87.9
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCC----CCceEEEEeCCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH----KDEGYAIDWNPIT 241 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~sp~~ 241 (359)
..|.--+|-... .++-.+ +..|+.|++.. ...|+..|..| ...|....-+++.
T Consensus 106 e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~--------------------~s~P~k~fdR~~~L~~~QIinY~~d~~~ 162 (1630)
T 1xi4_A 106 DDVTFWKWISLN--TVALVT-DNAVYHWSMEG--------------------ESQPVKMFDRHSSLAGCQIINYRTDAKQ 162 (1630)
T ss_pred CCceEEEecCCC--eeEEEc-CCeEEEeccCC--------------------CCccHHHHhcchhcccCeeEEeeeCCCC
Confidence 456666775544 333322 35799999975 24555555555 3356666667777
Q ss_pred CCeEEEEc------CCCcEEEEecCCCCcceecCccccCCCCCeEEEEec--CCCCCEEEEEeC---CCcEEEEECCCC-
Q 018235 242 TGRLVTGD------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWS--PTEPDVFASCSV---DGHIAIWDTRVG- 309 (359)
Q Consensus 242 ~~~l~sgs------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~s--p~~~~~las~s~---Dg~I~iwD~r~~- 309 (359)
.-++++|- -.|.+.+|.....- .+.+.||.+.-..+... +....+|+.+.. .+.++|.++...
T Consensus 163 kW~~l~gi~~~~~~v~G~mQLyS~er~~-----sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~ 237 (1630)
T 1xi4_A 163 KWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP 237 (1630)
T ss_pred CeEEEEeeccCCCcccceeeeeeccccc-----chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCc
Confidence 64444443 45888999886521 26677887665444442 222225554433 268999988543
Q ss_pred -CCceE-------Eee--cCCCCEEEEEEcCCCCeEEEEeeecccceEEEEEeCcCCc
Q 018235 310 -KSALT-------SFK--AHNADVNVISWNRCWLAVCWHLEVMMEHFLFMILDCSRGE 357 (359)
Q Consensus 310 -~~~~~-------~~~--~h~~~V~~i~~s~~~~~l~~~~~~~~~d~~i~iwd~~~g~ 357 (359)
..+.. .+. +-.....++..++.-.++..-.. -+.+.++|..+|.
T Consensus 238 ~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk----~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 238 TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK----YGYIHLYDLETGT 291 (1630)
T ss_pred cCCCCCccccccccCCcccccCcceEEEeccccCEEEEEec----CceEEEEecccch
Confidence 01111 111 11222334555554444433333 5678888888875
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=84.14 E-value=23 Score=31.73 Aligned_cols=208 Identities=12% Similarity=0.109 Sum_probs=116.8
Q ss_pred CCCCceee-eChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCC
Q 018235 44 LEEGEELQ-CDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELV 122 (359)
Q Consensus 44 ~~~~~~l~-~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~ 122 (359)
|+.+.-|+ |+-.+-.-|.+|.+.-|..--.|+-+. +.-||.+| .++-|.+..
T Consensus 83 Lrag~~LQiFnletK~klks~~~~e~VvfWkWis~~----------~L~lVT~t--------aVyHWs~~~--------- 135 (365)
T 2xzh_A 83 LKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN----------TVALVTDN--------AVYHWSMEG--------- 135 (365)
T ss_dssp EEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSS----------EEEEEESS--------EEEEEESST---------
T ss_pred EecCCeEEEechHHhhhhcceecCCccEEEEecCCC----------eEEEEcCC--------cEEEEcccC---------
Confidence 55555554 444555678888888888888888764 45666555 676676620
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecC--CCceeeEEEeCCCCcEEEEEe------CCCcEEEEE
Q 018235 123 PNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAH--QGCVNRIRAMTQNPHICASWA------DTGHVQVWD 194 (359)
Q Consensus 123 ~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H--~~~V~~i~~~p~~~~~lat~s------~dg~V~iwd 194 (359)
+ ..|.......+. ...|-.-+.+++..-++.+|- -.|.+++|.
T Consensus 136 ----------------~-------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 186 (365)
T 2xzh_A 136 ----------------E-------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 186 (365)
T ss_dssp ----------------T-------------CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ----------------C-------------CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEe
Confidence 0 255554443221 245555566666633333332 237788998
Q ss_pred CCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEe--CCCCCCeEEEEcC---CCcEEEEecCCC--Cccee
Q 018235 195 LRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW--NPITTGRLVTGDC---NSCIYLWEPASD--ATWNV 267 (359)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--sp~~~~~l~sgs~---dg~I~lwd~~~~--~~~~~ 267 (359)
... +.-..+.||......+.. ++....+|+-+.. .+.++|-++... +....
T Consensus 187 ~er----------------------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f 244 (365)
T 2xzh_A 187 VDR----------------------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 244 (365)
T ss_dssp TTT----------------------TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCC
T ss_pred ecc----------------------cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCc
Confidence 876 333456666543222211 1111112332222 258899888542 21110
Q ss_pred cCc----ccc--CCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCC
Q 018235 268 DPN----PFI--GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRC 331 (359)
Q Consensus 268 ~~~----~~~--~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~ 331 (359)
..+ .|. ....---+++.|+... ++.....-|.|++||+.++ .++..-+-....|..-+-+..
T Consensus 245 ~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTg-t~i~~nrIS~d~iF~ta~~~~ 312 (365)
T 2xzh_A 245 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG-TCIYMNRISGETIFVTAPHEA 312 (365)
T ss_dssp CCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEEGG
T ss_pred ccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccC-cEEEEeccCCCceEEecccCC
Confidence 000 011 1234445688888888 8889999999999999998 666655545555655554433
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=82.36 E-value=32 Score=32.10 Aligned_cols=213 Identities=11% Similarity=0.100 Sum_probs=121.9
Q ss_pred CCCCceee-eChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCC
Q 018235 44 LEEGEELQ-CDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELV 122 (359)
Q Consensus 44 ~~~~~~l~-~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~ 122 (359)
|+.+.-|+ |+-.+-.-|-+|.+.-|..--.|+-+. +.-+|.+| .++-|.+..
T Consensus 82 Lrag~~lQiFnle~K~klks~~~~e~VvfWkWis~~----------~l~lVT~t--------aVyHWsi~~--------- 134 (494)
T 1bpo_A 82 LKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN----------TVALVTDN--------AVYHWSMEG--------- 134 (494)
T ss_dssp EEETTEEEEEETTTTEEEEEEECSSCCCEEEEEETT----------EEEEECSS--------EEEEEESSS---------
T ss_pred EecCCeEEEEchHHhhhhcceecCCCceEEEecCCC----------eEEEEcCC--------eeEEecccC---------
Confidence 55555554 455566678888888888888899774 35566555 666666520
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEecC--CCceeeEEEeCCCCcEEEEEe------CCCcEEEEE
Q 018235 123 PNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAH--QGCVNRIRAMTQNPHICASWA------DTGHVQVWD 194 (359)
Q Consensus 123 ~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~H--~~~V~~i~~~p~~~~~lat~s------~dg~V~iwd 194 (359)
+ ..|.......+. ...|-.-+.+++..-++.+|- -.|.+.+|.
T Consensus 135 ----------------~-------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 185 (494)
T 1bpo_A 135 ----------------E-------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (494)
T ss_dssp ----------------S-------------CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEE
T ss_pred ----------------C-------------CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEee
Confidence 0 255555443221 345555666776633333322 237788998
Q ss_pred CCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeC--CCCCCeEEEEcC---CCcEEEEecCCC--Cccee
Q 018235 195 LRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN--PITTGRLVTGDC---NSCIYLWEPASD--ATWNV 267 (359)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--p~~~~~l~sgs~---dg~I~lwd~~~~--~~~~~ 267 (359)
... +.-..+.||......+... +....+|+-+.. .+.++|-++... +....
T Consensus 186 ~er----------------------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f 243 (494)
T 1bpo_A 186 VDR----------------------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (494)
T ss_dssp STT----------------------CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC
T ss_pred ccc----------------------cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc
Confidence 876 3334566665433222221 111113333332 268999888543 11110
Q ss_pred cC---c-ccc--CCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEeecCCCCEEEEEEcCCCCeEE
Q 018235 268 DP---N-PFI--GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRCWLAVC 336 (359)
Q Consensus 268 ~~---~-~~~--~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~s~~~~~l~ 336 (359)
.. . .|. .-..---+++.|+... ++.....-|.|++||+.++ .++..-+-....|..-+-+....-++
T Consensus 244 ~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTg-t~i~~nrIs~~~iF~t~~~~~~~Gi~ 316 (494)
T 1bpo_A 244 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG-TCIYMNRISGETIFVTAPHEATAGII 316 (494)
T ss_dssp CCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEETTTTEEE
T ss_pred cceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccc-eeeeeecccCCceEEecccCCCCcEE
Confidence 00 0 011 1234455788888888 8889999999999999998 66665555555666555554444333
No 319
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.50 E-value=29 Score=35.80 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=30.1
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
.+.++...++.. ++.+-+.|+++|||++.++ +++.+.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~-~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN-QCVETI 273 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTT-EEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCC-CeEeee
Confidence 567777777777 8899999999999999997 555554
No 320
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=81.04 E-value=35 Score=31.87 Aligned_cols=109 Identities=7% Similarity=0.056 Sum_probs=61.4
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCC--cceecCcc-cc-----CCCCCeEEEEecCC----CCCEEEEEeCC
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA--TWNVDPNP-FI-----GHSASVEDLQWSPT----EPDVFASCSVD 298 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~--~~~~~~~~-~~-----~h~~~V~~v~~sp~----~~~~las~s~D 298 (359)
.-.+|+|.|++.++|+.+...|.|++++..... ..+..+.. +. ........|+|+|+ +. ++++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~-lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK-LYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE-EEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE-EEEEEeCC
Confidence 456899999986556667789999999753211 11111111 11 12467889999996 44 55554421
Q ss_pred C------------cEEEEECCCC---------CCceEEee--cCCCCEEEEEEcCCCCeEEEEee
Q 018235 299 G------------HIAIWDTRVG---------KSALTSFK--AHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 299 g------------~I~iwD~r~~---------~~~~~~~~--~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
. .|.-|.+... .+.+..+. ........|.|.|+|.+.+....
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 3333544321 01233332 11224688999999977665443
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=80.47 E-value=32 Score=30.81 Aligned_cols=114 Identities=10% Similarity=0.013 Sum_probs=64.1
Q ss_pred EecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCccee-cC-ccccCCCCCeEEEEecCC---CCCEEEEEe--
Q 018235 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV-DP-NPFIGHSASVEDLQWSPT---EPDVFASCS-- 296 (359)
Q Consensus 224 ~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~-~~-~~~~~h~~~V~~v~~sp~---~~~~las~s-- 296 (359)
.+...-..-++|+|.|++. +|++--..|.|++++...+....+ .. ..+.........|+++|+ +..++++-+
T Consensus 26 ~va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EeecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 4444445678999999997 777665589999998654221110 00 112234567899999995 332555433
Q ss_pred CCCcEEEEECCCC---------CCceEE-ee-cCCCCEEEEEEcCCCCeEEEE
Q 018235 297 VDGHIAIWDTRVG---------KSALTS-FK-AHNADVNVISWNRCWLAVCWH 338 (359)
Q Consensus 297 ~Dg~I~iwD~r~~---------~~~~~~-~~-~h~~~V~~i~~s~~~~~l~~~ 338 (359)
.+..|.-|.+... .+.+.. +. ........|.|.|+|.+.+..
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE
Confidence 3444555554431 011221 21 111234678999999766553
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=80.46 E-value=6.3 Score=33.16 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=58.2
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCc--ceecCccccCCC--CCeEEEEecCCCCCEEEEEeCCCcEEEEEC
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDAT--WNVDPNPFIGHS--ASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~--~~~~~~~~~~h~--~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (359)
.+..|+|+|++. |... .+|.++-.+..+... |.-. .+..+.. ..-.++.|.|++. +.++ .||.|.-++-
T Consensus 42 ~~~~laf~P~G~--LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGE--LYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSC--EEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESC
T ss_pred cceeEEECCCcc--EEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCC
Confidence 566999999775 4444 677766666543211 1100 0111110 1136889999998 6666 5698887775
Q ss_pred CCCCC-----ceEEeec-CCCCEEEEEEcCCCCeEEEE
Q 018235 307 RVGKS-----ALTSFKA-HNADVNVISWNRCWLAVCWH 338 (359)
Q Consensus 307 r~~~~-----~~~~~~~-h~~~V~~i~~s~~~~~l~~~ 338 (359)
.+... ....+.. -=..+..|.|.|+|.+.+..
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 33211 1111211 11357999999999877766
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=79.28 E-value=76 Score=34.43 Aligned_cols=191 Identities=12% Similarity=0.116 Sum_probs=102.2
Q ss_pred CCCCceee-eChhHhhhhhcccccCcceeEEEEeccCCCCcccCCceEEEEEeecCCCCCCceEEEEEeeccCCcccCCC
Q 018235 44 LEEGEELQ-CDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELV 122 (359)
Q Consensus 44 ~~~~~~l~-~~~~~Y~~~~~~~~~wP~ls~~~~pd~~~~~~~~~~~~~~~~~GT~~~~~~~n~l~i~~~~~l~~~~~~~~ 122 (359)
|+.|.-|+ |+-.+-.-+.+|.+.-|..--.|+.+. +.-+|.+| .++-|.+..-
T Consensus 82 Lrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~----------~l~lVT~~--------aVyHW~~~~~-------- 135 (1630)
T 1xi4_A 82 LKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN----------TVALVTDN--------AVYHWSMEGE-------- 135 (1630)
T ss_pred EecCCeEEEeehHHhhhhcccccCCCceEEEecCCC----------eeEEEcCC--------eEEEeccCCC--------
Confidence 55666664 566667779999999999988999764 35666555 5777766210
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCeEEEEEec--CCCceeeEEEeCCCCcEEEEE------eCCCcEEEEE
Q 018235 123 PNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVA--HQGCVNRIRAMTQNPHICASW------ADTGHVQVWD 194 (359)
Q Consensus 123 ~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--H~~~V~~i~~~p~~~~~lat~------s~dg~V~iwd 194 (359)
..|+..+...+ -...|-.-+.+++..-++.+| .-.|.+.+|.
T Consensus 136 ------------------------------s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS 185 (1630)
T 1xi4_A 136 ------------------------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (1630)
T ss_pred ------------------------------CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeee
Confidence 13322211110 124455556666663233332 2358889998
Q ss_pred CCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEe--CCCCCCeEEEEcC---CCcEEEEecCCC--Cccee
Q 018235 195 LRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW--NPITTGRLVTGDC---NSCIYLWEPASD--ATWNV 267 (359)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--sp~~~~~l~sgs~---dg~I~lwd~~~~--~~~~~ 267 (359)
..... ...+.||.+....+.. ++....+++.+.. .+.++|-++... +....
T Consensus 186 ~er~~----------------------sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f 243 (1630)
T 1xi4_A 186 VDRKV----------------------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (1630)
T ss_pred ccccc----------------------chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC
Confidence 87622 1223344332111111 1111112221111 257888887542 11110
Q ss_pred cC---c-cccC--CCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceE
Q 018235 268 DP---N-PFIG--HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314 (359)
Q Consensus 268 ~~---~-~~~~--h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~ 314 (359)
.. . .|.. -..-.-+++.|+... ++...+.-|.|+++|+.++ .++.
T Consensus 244 ~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~-~~i~ 294 (1630)
T 1xi4_A 244 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG-TCIY 294 (1630)
T ss_pred ccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccc-hhhh
Confidence 00 0 1111 122334577788777 8888999999999999998 4443
No 324
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=78.79 E-value=42 Score=31.19 Aligned_cols=115 Identities=10% Similarity=0.079 Sum_probs=63.2
Q ss_pred EEecCCCCceEEEEeCCCCCCeEEEEcCCCcEEEEecCCCCcce--ecCcc-cc--CCCCCeEEEEecCC---CCCEEEE
Q 018235 223 VKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN--VDPNP-FI--GHSASVEDLQWSPT---EPDVFAS 294 (359)
Q Consensus 223 ~~~~~h~~~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~--~~~~~-~~--~h~~~V~~v~~sp~---~~~~las 294 (359)
..+...-..-.+|+|.|++. ++++-...+.|++++... +... ..... +. ........|+|+|+ +..++++
T Consensus 20 ~~~a~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~-g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPDNQ-IWLTERATGKILRVNPES-GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTT-CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEECCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCC-CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 34433344667999999987 666554334788887644 2211 10111 11 12456789999995 4436665
Q ss_pred EeC------------CCcEEEEECCCCC------CceEE-ee-cCCCCEEEEEEcCCCCeEEEEe
Q 018235 295 CSV------------DGHIAIWDTRVGK------SALTS-FK-AHNADVNVISWNRCWLAVCWHL 339 (359)
Q Consensus 295 ~s~------------Dg~I~iwD~r~~~------~~~~~-~~-~h~~~V~~i~~s~~~~~l~~~~ 339 (359)
-+. ...|.-|+..... +.+.. +. ........|.|.|+|.+.+...
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 543 1245555543221 11221 21 1123478999999998766543
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=70.68 E-value=53 Score=28.55 Aligned_cols=91 Identities=11% Similarity=0.018 Sum_probs=50.5
Q ss_pred EEeCCCCCCeEEEEc--CCC--cEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCCcEEEEECCCCC
Q 018235 235 IDWNPITTGRLVTGD--CNS--CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (359)
Q Consensus 235 l~~sp~~~~~l~sgs--~dg--~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (359)
..|++.+. .|+-.+ .++ .|+.-++.. .-. ..+..+.. ..|+|.+..++.+......|...++...
T Consensus 109 ~~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dG--s~~---~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~- 177 (302)
T 3s25_A 109 IYASLIGN-YIYYLHYDTQTATSLYRIRIDG--EEK---KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ- 177 (302)
T ss_dssp EEEEEETT-EEEEEEESSSSCEEEEEEETTS--CCC---EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT-
T ss_pred cEEEEeCC-EEEEEeecCCCCceEEEEECCC--CCe---EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC-
Confidence 46777777 665544 334 455455542 211 23333332 3567788855555444677888887765
Q ss_pred CceEEeecCCCCEEEEEEcCCCCeEEEEee
Q 018235 311 SALTSFKAHNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 311 ~~~~~~~~h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
. ...+.. ..... .+.|++.+|.|...
T Consensus 178 ~-~~~l~~--~~~~~-~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 178 S-EALFYD--CNCYK-PVVLDDTNVYYMDV 203 (302)
T ss_dssp E-EEEEEC--SCEEE-EEEEETTEEEEEEG
T ss_pred C-EEEEeC--CCccc-eeeecCCEEEEEEc
Confidence 2 223321 23332 35688999988754
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=68.95 E-value=81 Score=33.28 Aligned_cols=103 Identities=9% Similarity=0.014 Sum_probs=57.7
Q ss_pred cEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC--CCCceEEEEeCCCCCCeEEEEcCCCcEEE
Q 018235 179 HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG--HKDEGYAIDWNPITTGRLVTGDCNSCIYL 256 (359)
Q Consensus 179 ~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sgs~dg~I~l 256 (359)
++++.|..-..|.++.++.. ...+..+.. +...++++.+-.++ .++.++.+|.|.+
T Consensus 937 ~~I~vgD~~~Sv~~~~y~~~--------------------~~~L~~~a~D~~~~~vta~~~ld~~--t~l~aD~~gNl~v 994 (1158)
T 3ei3_A 937 DFILVGDLMRSVLLLAYKPM--------------------EGNFEEIARDFNPNWMSAVEILDDD--NFLGAENAFNLFV 994 (1158)
T ss_dssp TEEEEEESSBCEEEEEEETT--------------------TTEEEEEEECCSCBCEEEEEEEETT--EEEEEETTSEEEE
T ss_pred CEEEEEEhhheEEEEEEEcC--------------------CCeEEEEEeecccccEEEEEEEccC--cEEEEcCCCcEEE
Confidence 57777777777877766542 122223322 23367777775443 6888999999999
Q ss_pred EecCCCC------cceecCccccCCCCCeEEEE---ecCCC--------CCEEEEEeCCCcEEEE
Q 018235 257 WEPASDA------TWNVDPNPFIGHSASVEDLQ---WSPTE--------PDVFASCSVDGHIAIW 304 (359)
Q Consensus 257 wd~~~~~------~~~~~~~~~~~h~~~V~~v~---~sp~~--------~~~las~s~Dg~I~iw 304 (359)
....... ..+.....| .....|++++ +.+.+ ...++.++.+|+|-+.
T Consensus 995 l~~~~~~~~~~~~~~L~~~~~f-hlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 995 CQKDSAATTDEERQHLQEVGLF-HLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEECTTCCSTTGGGBEEEEEEE-ECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred EecCCCCCCccccceeeeEEEE-eCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 8665411 111101111 1234566665 33332 2256777888888766
No 327
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=64.90 E-value=64 Score=27.33 Aligned_cols=104 Identities=9% Similarity=0.052 Sum_probs=49.4
Q ss_pred eEEEEcCC-----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEECCCCCCce
Q 018235 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSAL 313 (359)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~~ 313 (359)
+++.|+.+ ..+.+||+.+ .+|... ..+......-..+.+ ++. +++.|+.+ ..+.+||+.+. . -
T Consensus 115 lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~-~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~-~-W 187 (301)
T 2vpj_A 115 IYVSGGFDGSRRHTSMERYDPNI-DQWSML-GDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTG-H-W 187 (301)
T ss_dssp EEEECCBCSSCBCCEEEEEETTT-TEEEEE-EECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTT-E-E
T ss_pred EEEEcccCCCcccceEEEEcCCC-CeEEEC-CCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCC-c-E
Confidence 66666543 3588899876 555421 111111111122222 455 77777654 45888998875 1 1
Q ss_pred EEeec---CCCCEEEEEEcCCCCeEEEEeeeccc-ceEEEEEeCcCC
Q 018235 314 TSFKA---HNADVNVISWNRCWLAVCWHLEVMME-HFLFMILDCSRG 356 (359)
Q Consensus 314 ~~~~~---h~~~V~~i~~s~~~~~l~~~~~~~~~-d~~i~iwd~~~g 356 (359)
..+.. ......++.+ ++.+++++...... ...+.++|+.++
T Consensus 188 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 188 TNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 12211 1111122222 45666665432211 234667776654
No 328
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=64.34 E-value=66 Score=27.26 Aligned_cols=104 Identities=10% Similarity=0.075 Sum_probs=51.8
Q ss_pred eEEEEcCC-----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEECCCCCCce
Q 018235 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSAL 313 (359)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~~ 313 (359)
+++.|+.+ ..+.+||+.+ ..|... ..+.........+.+ ++. +++.|+.+ ..+.+||+.+. . -
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~-~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~-~-W 234 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHT-GHWTNV-TPMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNIRTD-S-W 234 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTT-TEEEEE-CCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTT-E-E
T ss_pred EEEECCCCCCcccceEEEEeCCC-CcEEeC-CCCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeCCCC-c-E
Confidence 66666654 4588999876 566421 111111111222333 344 77777754 46899999875 2 1
Q ss_pred EEeec---CCCCEEEEEEcCCCCeEEEEeeeccc-ceEEEEEeCcCC
Q 018235 314 TSFKA---HNADVNVISWNRCWLAVCWHLEVMME-HFLFMILDCSRG 356 (359)
Q Consensus 314 ~~~~~---h~~~V~~i~~s~~~~~l~~~~~~~~~-d~~i~iwd~~~g 356 (359)
..+.. ......++.+ ++.+++.+...... -..+.++|+.++
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 22211 1111122222 56666665432111 245777777654
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=60.76 E-value=79 Score=26.98 Aligned_cols=104 Identities=8% Similarity=-0.008 Sum_probs=52.1
Q ss_pred eEEEEcCC-----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEECCCCCCce
Q 018235 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSAL 313 (359)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~~ 313 (359)
+++.|+.+ ..+.+||+.+ ..|... ..+.........+.+ ++. +++.|+.+ ..+.+||+.+. . -
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~-~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~-~-W 243 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPER-NEWRMI-TAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVETE-T-W 243 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTT-TEEEEC-CCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTT-E-E
T ss_pred EEEEeCCCCCCcCceEEEEeCCC-CeEeeC-CCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCCC-c-E
Confidence 66666654 4588999876 565431 112111112222333 444 77777654 56889998875 1 1
Q ss_pred EEee---cCCCCEEEEEEcCCCCeEEEEeeecc-cceEEEEEeCcCC
Q 018235 314 TSFK---AHNADVNVISWNRCWLAVCWHLEVMM-EHFLFMILDCSRG 356 (359)
Q Consensus 314 ~~~~---~h~~~V~~i~~s~~~~~l~~~~~~~~-~d~~i~iwd~~~g 356 (359)
..+. .......++.+ ++.+++++..... .-..+.++|+.+.
T Consensus 244 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 244 TFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 1111 11111122222 4666666643221 1345777777654
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=53.11 E-value=1.7e+02 Score=28.60 Aligned_cols=67 Identities=13% Similarity=0.196 Sum_probs=39.0
Q ss_pred CCCCeEEEEcCCC--cEEEEecCCCCcceecCc--cccCCCCCeEEEEecCC-CCCEEEEEeC--C-----CcEEEEECC
Q 018235 240 ITTGRLVTGDCNS--CIYLWEPASDATWNVDPN--PFIGHSASVEDLQWSPT-EPDVFASCSV--D-----GHIAIWDTR 307 (359)
Q Consensus 240 ~~~~~l~sgs~dg--~I~lwd~~~~~~~~~~~~--~~~~h~~~V~~v~~sp~-~~~~las~s~--D-----g~I~iwD~r 307 (359)
.+. +++.|+.++ .+.+||+.+ ..|..... ..........++.+... +. +++.|+. + ..+.+||+.
T Consensus 500 ~~~-iyv~GG~~~~~~v~~yd~~t-~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~-iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 500 DGN-VLILGGVTEGPAMLLYNVTE-EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ-GIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp TSC-EEEECCBCSSCSEEEEETTT-TEEEECCCSSGGGGSCCBSCEEEEETTTTE-EEEECCBCTTSSCBCCEEEEEEEC
T ss_pred CCE-EEEECCCCCCCCEEEEECCC-CceEEccCCCCCCCcccceeEEEEeCCCCE-EEEECCcCCCCCeeeCcEEEEEcc
Confidence 454 777777655 689999977 66653211 01111122233455555 44 7777765 2 458889988
Q ss_pred CC
Q 018235 308 VG 309 (359)
Q Consensus 308 ~~ 309 (359)
+.
T Consensus 577 ~~ 578 (695)
T 2zwa_A 577 AE 578 (695)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 331
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=53.02 E-value=1.1e+02 Score=26.40 Aligned_cols=91 Identities=10% Similarity=0.011 Sum_probs=47.4
Q ss_pred EEeCCCCCCeEEEEcCCCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-CcEEEEECCCCCCce
Q 018235 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSAL 313 (359)
Q Consensus 235 l~~sp~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~ 313 (359)
++|++.+..++.+......|.+-++.. +... ..+. .... ..++|.+..++.+-..+ ..|..-++... ..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~~~---~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~--~~ 219 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTAS-QSEA---LFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP--NP 219 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTT-TEEE---EEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC--CC
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCC-CCEE---EEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC--Ce
Confidence 345667773444544466787777754 2211 1122 2222 34568888455554333 35655666654 22
Q ss_pred EEeecCCCCEEEEEEcCCCCeEEEEe
Q 018235 314 TSFKAHNADVNVISWNRCWLAVCWHL 339 (359)
Q Consensus 314 ~~~~~h~~~V~~i~~s~~~~~l~~~~ 339 (359)
..+. ...+ ..|+|.+..|.|..
T Consensus 220 ~~Lt--~~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 220 VVLT--EANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp EECS--CSCE--EEEEEETTEEEEEE
T ss_pred EEEe--CCCc--ceEEECCCEEEEEE
Confidence 2332 2223 34788888888863
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=49.84 E-value=62 Score=28.79 Aligned_cols=26 Identities=12% Similarity=0.109 Sum_probs=21.7
Q ss_pred EEEEEeCCCcEEEEECCCCCCceEEee
Q 018235 291 VFASCSVDGHIAIWDTRVGKSALTSFK 317 (359)
Q Consensus 291 ~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (359)
.+.+|+.+|.+.-.|++++ +.+..+.
T Consensus 113 ~Vy~Gs~~g~l~ald~~tG-~~~W~~~ 138 (339)
T 2be1_A 113 KVYTGSMRTIMYTINMLNG-EIISAFG 138 (339)
T ss_dssp EEEECEEEEEEEEEETTTC-CEEEEES
T ss_pred EEEEEecCCEEEEEECCCC-cEEEEEe
Confidence 6788999999999999998 6666663
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=49.45 E-value=1.2e+02 Score=25.61 Aligned_cols=61 Identities=8% Similarity=0.217 Sum_probs=32.9
Q ss_pred eEEEEcCC-----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCC-----cEEEEECCCC
Q 018235 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG-----HIAIWDTRVG 309 (359)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg-----~I~iwD~r~~ 309 (359)
+++.|+.+ ..+.+||+.+ .+|.... .+.........+.+ ++. +++.|+.++ .|.+||+.+.
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~-~~~~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTT-NAWRQVA-DMNMCRRNAGVCAV--NGL-LYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTT-TEEEEEC-CCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEECCCCCCcccceEEEEeCCC-CCEeeCC-CCCCccccCeEEEE--CCE-EEEECCcCCCcccccEEEEcCCCC
Confidence 66777654 3688999976 5664211 11111111112222 444 777777553 4778887764
No 334
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=43.37 E-value=1.5e+02 Score=24.97 Aligned_cols=104 Identities=9% Similarity=0.041 Sum_probs=50.2
Q ss_pred eEEEEcCC-------CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEECCCCCC
Q 018235 244 RLVTGDCN-------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKS 311 (359)
Q Consensus 244 ~l~sgs~d-------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~ 311 (359)
+++.|+.+ ..+.+||+.+ ..|... ..+.........+.+ ++. +++.|+.+ ..+.+||+.+. .
T Consensus 158 iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~~~-~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~-~ 231 (302)
T 2xn4_A 158 LYAVGGYDVASRQCLSTVECYNATT-NEWTYI-AEMSTRRSGAGVGVL--NNL-LYAVGGHDGPLVRKSVEVYDPTTN-A 231 (302)
T ss_dssp EEEECCEETTTTEECCCEEEEETTT-TEEEEE-CCCSSCCBSCEEEEE--TTE-EEEECCBSSSSBCCCEEEEETTTT-E
T ss_pred EEEEeCCCCCCCccccEEEEEeCCC-CcEEEC-CCCccccccccEEEE--CCE-EEEECCCCCCcccceEEEEeCCCC-C
Confidence 55655542 3588999876 555421 111111111222232 444 77777754 46889999875 2
Q ss_pred ceEEeecCC---CCEEEEEEcCCCCeEEEEeeeccc-ceEEEEEeCcCC
Q 018235 312 ALTSFKAHN---ADVNVISWNRCWLAVCWHLEVMME-HFLFMILDCSRG 356 (359)
Q Consensus 312 ~~~~~~~h~---~~V~~i~~s~~~~~l~~~~~~~~~-d~~i~iwd~~~g 356 (359)
-..+.... ....++.+ ++.+++.+...... -..+.++|+.++
T Consensus 232 -W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 232 -WRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp -EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred -EeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 11221111 11112222 56666666543211 234677776654
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=42.67 E-value=3e+02 Score=28.24 Aligned_cols=31 Identities=6% Similarity=-0.025 Sum_probs=26.0
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCC
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASD 262 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~ 262 (359)
.+.++...++.. ++++-+.|+++++|++.++
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCC
Confidence 466777777776 8999999999999999873
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=41.69 E-value=96 Score=29.96 Aligned_cols=92 Identities=9% Similarity=-0.053 Sum_probs=57.9
Q ss_pred EEecCCCceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecCCCCceEEEEeCC
Q 018235 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (359)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 239 (359)
..++-...-..+.++|+|..+++++-.+.+|.++|+.+....+...-.. ....+..-..-...-.-.+|.+
T Consensus 317 ~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~---------~~~~~~ae~e~GlGPlHt~Fd~ 387 (638)
T 3sbq_A 317 RYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLAD---------PRDVIVGEPELGLGPLHTTFDG 387 (638)
T ss_dssp EEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSC---------GGGGEEECCBCCSCEEEEEECS
T ss_pred EEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccC---------cccceEeeccCCCcccEEEECC
Confidence 3445555666789999998888998899999999998632222110000 0011111001122345678888
Q ss_pred CCCCeEEEEcCCCcEEEEecCC
Q 018235 240 ITTGRLVTGDCNSCIYLWEPAS 261 (359)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~ 261 (359)
.|. ...|---|..|..|++..
T Consensus 388 ~G~-aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 388 RGN-AYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SSE-EEEEETTTTEEEEEEHHH
T ss_pred CCc-eEeeeeecceEEEEeccH
Confidence 884 777788899999999854
No 337
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=40.77 E-value=1.6e+02 Score=24.74 Aligned_cols=61 Identities=16% Similarity=0.287 Sum_probs=34.3
Q ss_pred eEEEEcCC-----CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEECCCC
Q 018235 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVG 309 (359)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~ 309 (359)
+++.|+.+ ..+.+||+.+ .+|... ..+.........+.+ ++. +++.|+.+ ..+.+||+.+.
T Consensus 203 i~v~GG~~~~~~~~~~~~yd~~~-~~W~~~-~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 203 IFAVGGQNGLGGLDNVEYYDIKL-NEWKMV-SPMPWKGVTVKCAAV--GSI-VYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEECCEETTEEBCCEEEEETTT-TEEEEC-CCCSCCBSCCEEEEE--TTE-EEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEEEeCCCCCCCCceEEEeeCCC-CcEEEC-CCCCCCccceeEEEE--CCE-EEEEeCcCCCeeeeeEEEEcCCCC
Confidence 66666543 4688999977 566531 122211122223333 444 77777744 45788888775
No 338
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=39.31 E-value=1.7e+02 Score=24.58 Aligned_cols=96 Identities=10% Similarity=0.116 Sum_probs=46.7
Q ss_pred CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCC-----CcEEEEECCCCCCceEEe---ecCCCCE
Q 018235 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSALTSF---KAHNADV 323 (359)
Q Consensus 252 g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~~~~~---~~h~~~V 323 (359)
..+.+||+.+ ..|... ..+......-..+.+ ++. +++.|+.+ ..+.+||+.+. . -..+ .......
T Consensus 169 ~~~~~yd~~~-~~W~~~-~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~-~-W~~~~~~p~~r~~~ 241 (306)
T 3ii7_A 169 NSCEVYDPAT-ETWTEL-CPMIEARKNHGLVFV--KDK-IFAVGGQNGLGGLDNVEYYDIKLN-E-WKMVSPMPWKGVTV 241 (306)
T ss_dssp CCEEEEETTT-TEEEEE-CCCSSCCBSCEEEEE--TTE-EEEECCEETTEEBCCEEEEETTTT-E-EEECCCCSCCBSCC
T ss_pred ceEEEeCCCC-CeEEEC-CCccchhhcceEEEE--CCE-EEEEeCCCCCCCCceEEEeeCCCC-c-EEECCCCCCCccce
Confidence 4588999977 565421 111111111122222 444 77777643 45888998875 1 1111 1111112
Q ss_pred EEEEEcCCCCeEEEEeeecc-cceEEEEEeCcCC
Q 018235 324 NVISWNRCWLAVCWHLEVMM-EHFLFMILDCSRG 356 (359)
Q Consensus 324 ~~i~~s~~~~~l~~~~~~~~-~d~~i~iwd~~~g 356 (359)
.++.+ ++.+++++..... .-..+.++|+.++
T Consensus 242 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 242 KCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred eEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 22333 5666666653221 2345677777654
No 339
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.14 E-value=28 Score=36.70 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=28.1
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
.+.+++..++.. ++++-+.|+++|||++.++ .++.+.
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~-~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN-QCVETI 275 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTT-EEEEEE
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCC-CeEEee
Confidence 344556666666 8899999999999999987 555543
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=34.57 E-value=3.4e+02 Score=26.52 Aligned_cols=111 Identities=8% Similarity=0.082 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCC------CcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCC--cEEEEECCCCCC
Q 018235 240 ITTGRLVTGDCN------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--HIAIWDTRVGKS 311 (359)
Q Consensus 240 ~~~~~l~sgs~d------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--~I~iwD~r~~~~ 311 (359)
.+. +++.|+.+ ..+.+||+.+ ..|... ..+......-..+.+ .++. +++.|+.++ .+.+||+.+. .
T Consensus 451 ~~~-lyv~GG~~~~~~~~~dv~~yd~~t-~~W~~~-~~~p~~R~~h~~~~~-~~~~-iyv~GG~~~~~~v~~yd~~t~-~ 524 (695)
T 2zwa_A 451 NNQ-LLLIGGRKAPHQGLSDNWIFDMKT-REWSMI-KSLSHTRFRHSACSL-PDGN-VLILGGVTEGPAMLLYNVTEE-I 524 (695)
T ss_dssp TTE-EEEECCBSSTTCBCCCCEEEETTT-TEEEEC-CCCSBCCBSCEEEEC-TTSC-EEEECCBCSSCSEEEEETTTT-E
T ss_pred CCE-EEEEcCCCCCCCccccEEEEeCCC-CcEEEC-CCCCCCcccceEEEE-cCCE-EEEECCCCCCCCEEEEECCCC-c
Confidence 444 66666643 3578899876 566531 111111111122222 2555 888887654 6899999875 1
Q ss_pred ceEEee------cCCCCEEEEEEcCC-CCeEEEEeeecc---cceEEEEEeCcCCc
Q 018235 312 ALTSFK------AHNADVNVISWNRC-WLAVCWHLEVMM---EHFLFMILDCSRGE 357 (359)
Q Consensus 312 ~~~~~~------~h~~~V~~i~~s~~-~~~l~~~~~~~~---~d~~i~iwd~~~g~ 357 (359)
-..+. .......++.++.. +.+++++..... .-..+.+||+.+..
T Consensus 525 -W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 525 -FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp -EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred -eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 11111 01111233455555 666666644211 12456677766543
No 341
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=34.13 E-value=2.6e+02 Score=27.91 Aligned_cols=153 Identities=14% Similarity=0.120 Sum_probs=0.0
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC----CCCceEEEEeCCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HKDEGYAIDWNPIT 241 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~ 241 (359)
+.|.+|.++|..+.++..++..|.|...+=... ...++..... ....+.+|++.|..
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~-------------------tW~~~~~~~~~~~~~~~~i~~ia~dp~~ 75 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTS-------------------KWIPLNDFIEAQDMNIMGTESIALDPNN 75 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTT-------------------EEEESCTTCCGGGGGGCSEEEEEEETTE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCC-------------------CeeECccCCCcccccCCceeEEEECCCC
Q ss_pred CCeEEEEcCCCc----EEEEecCCCCcceecCccccCCCC------CeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCC
Q 018235 242 TGRLVTGDCNSC----IYLWEPASDATWNVDPNPFIGHSA------SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (359)
Q Consensus 242 ~~~l~sgs~dg~----I~lwd~~~~~~~~~~~~~~~~h~~------~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (359)
++.++.+..... -.||-....+.--.....-..... .+..++++|.....+..+...+. ||-...+.+
T Consensus 76 ~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~ 153 (789)
T 1sqj_A 76 PDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAK 153 (789)
T ss_dssp EEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTS
T ss_pred CCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCc
Q ss_pred ceEEeecCC------CCEEEEEEcCCCCeEEEEe
Q 018235 312 ALTSFKAHN------ADVNVISWNRCWLAVCWHL 339 (359)
Q Consensus 312 ~~~~~~~h~------~~V~~i~~s~~~~~l~~~~ 339 (359)
.=..+..-. ..+..|.++|...-.++..
T Consensus 154 TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 154 TWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYAS 187 (789)
T ss_dssp SCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEE
T ss_pred ccCCCccCccccCCCCCeEEEEECCCCCCEEEEE
No 342
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=33.67 E-value=1.7e+02 Score=28.18 Aligned_cols=63 Identities=11% Similarity=0.100 Sum_probs=40.9
Q ss_pred CCeEEEEecCCCCCEEE-EEeC-----------CCcEEEEECCCCCCceEEeec-CCCCEEEEEEcCCCCeEEEEeee
Q 018235 277 ASVEDLQWSPTEPDVFA-SCSV-----------DGHIAIWDTRVGKSALTSFKA-HNADVNVISWNRCWLAVCWHLEV 341 (359)
Q Consensus 277 ~~V~~v~~sp~~~~~la-s~s~-----------Dg~I~iwD~r~~~~~~~~~~~-h~~~V~~i~~s~~~~~l~~~~~~ 341 (359)
....+|.|.+.|. +.+ +-.. ...|..++..++ .....+.. ..+.++.++|+|+++.|.....-
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG-el~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATG-EIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTC-CEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCC-eEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 5678899999998 554 4321 124555666554 33222332 34678999999999988877643
No 343
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=32.27 E-value=2.3e+02 Score=23.95 Aligned_cols=61 Identities=10% Similarity=0.194 Sum_probs=34.0
Q ss_pred eEEEEcC------CCcEEEEecCCCCcceecCccccCCCCCeEEEEecCCCCCEEEEEeCCC-----cEEEEECCCC
Q 018235 244 RLVTGDC------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG-----HIAIWDTRVG 309 (359)
Q Consensus 244 ~l~sgs~------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg-----~I~iwD~r~~ 309 (359)
+++.|+. -..+.+||+.+ .+|... ..+......-..+.+ ++. +++.|+.++ .+.+||+.+.
T Consensus 151 iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~-~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 151 VYVIGGKGSDRKCLNKMCVYDPKK-FEWKEL-APMQTARSLFGATVH--DGR-IIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEECCBCTTSCBCCCEEEEETTT-TEEEEC-CCCSSCCBSCEEEEE--TTE-EEEEEEECSSSEEEEEEEEETTTT
T ss_pred EEEEeCCCCCCcccceEEEEeCCC-CeEEEC-CCCCCchhceEEEEE--CCE-EEEEeccCCCCccceEEEEECCCC
Confidence 6666665 24688999876 566431 112111111122222 445 777777654 4888998875
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=31.81 E-value=69 Score=31.76 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.4
Q ss_pred CeEEEEecCCCCCEEEEEeCCCcEEEEECCCCCCceEEe
Q 018235 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (359)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (359)
.|.++.+. .. ++++-+.|+++|+|+++++ +++...
T Consensus 223 ~Is~~~~~--~~-fLftL~~Dh~LRiWsL~t~-~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLFH--ER-YLIVLTQNCHLKIWDLTSF-TLIQDY 257 (729)
T ss_dssp EEEEEEET--TT-EEEEEETTCEEEEEETTTT-EEEEEE
T ss_pred eEEEeccC--Cc-EEEEEEcCCeEEEEEcCCC-ceEEee
Confidence 35555543 44 8999999999999999997 555554
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=26.58 E-value=1.3e+02 Score=29.11 Aligned_cols=77 Identities=4% Similarity=0.024 Sum_probs=52.7
Q ss_pred ceEEEEeCCCCCCeEEEEcCCCcEEEEecCCC-----CcceecCcccc---CCCCCeEEEEecCCCCCEEEEEeCCCcEE
Q 018235 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASD-----ATWNVDPNPFI---GHSASVEDLQWSPTEPDVFASCSVDGHIA 302 (359)
Q Consensus 231 ~v~~l~~sp~~~~~l~sgs~dg~I~lwd~~~~-----~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~las~s~Dg~I~ 302 (359)
.-+++..+|+|...+++|--+.++.+++++.- .+......... .-.....-.+|.+.|. ...|.--|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN-AYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE-EEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc-eEeeeeecceEE
Confidence 44689999999966777777889999998741 11100000000 1123456689999994 888888999999
Q ss_pred EEECCC
Q 018235 303 IWDTRV 308 (359)
Q Consensus 303 iwD~r~ 308 (359)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999875
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=25.72 E-value=3.4e+02 Score=23.72 Aligned_cols=61 Identities=5% Similarity=0.036 Sum_probs=39.9
Q ss_pred CCeEEEEecC-------CCCCEEEEEeCCCcEEEEECCCCCCceEE--e-ecCCCCEEEEEEcCCCCeEEEEe
Q 018235 277 ASVEDLQWSP-------TEPDVFASCSVDGHIAIWDTRVGKSALTS--F-KAHNADVNVISWNRCWLAVCWHL 339 (359)
Q Consensus 277 ~~V~~v~~sp-------~~~~~las~s~Dg~I~iwD~r~~~~~~~~--~-~~h~~~V~~i~~s~~~~~l~~~~ 339 (359)
..+..+.|.+ .+. +|++....+.|...++..+ ..+.. + ......+..|++.|+|.+++.+.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~-l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQK-LFIGALKDKDVIVMSVNGD-KVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTE-EEEEETTTTEEEEEEEETT-EEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred cCcceeEEECCccCcccCCc-EEEEEccCCEEEEEEeCCC-eEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 4567777753 354 7777777788888887753 32221 2 22345789999999999777543
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=22.78 E-value=1.6e+02 Score=26.14 Aligned_cols=62 Identities=15% Similarity=0.278 Sum_probs=33.4
Q ss_pred eEEEEcCCCcEEEEecCCCCc-ceecCccccCCCCCeEEEEe--cCCCCCEEEEE-eCCCcEEEEECCCC
Q 018235 244 RLVTGDCNSCIYLWEPASDAT-WNVDPNPFIGHSASVEDLQW--SPTEPDVFASC-SVDGHIAIWDTRVG 309 (359)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~-~~~~~~~~~~h~~~V~~v~~--sp~~~~~las~-s~Dg~I~iwD~r~~ 309 (359)
+++.++.||.|+-.|..++.. |..... ...++....- .+.+..+++.. +.||.|..++..++
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 788888899999999876321 221110 1011111100 01122144443 68999999998776
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=21.60 E-value=4.8e+02 Score=24.02 Aligned_cols=29 Identities=7% Similarity=-0.021 Sum_probs=21.1
Q ss_pred ceeeEEEeCCCC-cEEEEEeCCCcEEEEECC
Q 018235 167 CVNRIRAMTQNP-HICASWADTGHVQVWDLR 196 (359)
Q Consensus 167 ~V~~i~~~p~~~-~~lat~s~dg~V~iwd~~ 196 (359)
.-+.|+|.|++. .++++ ...|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFIL-EKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEE-ETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEE-eCCceEEEEeCC
Confidence 446789999984 36665 668999999743
No 349
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=20.87 E-value=3.8e+02 Score=25.74 Aligned_cols=61 Identities=13% Similarity=0.122 Sum_probs=37.8
Q ss_pred CeEEEEecCCCCCEEEEEeCC------------CcEEEEECCCCCCceEEeec-CCCCEEEEEEcCCCCeEEEEee
Q 018235 278 SVEDLQWSPTEPDVFASCSVD------------GHIAIWDTRVGKSALTSFKA-HNADVNVISWNRCWLAVCWHLE 340 (359)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~D------------g~I~iwD~r~~~~~~~~~~~-h~~~V~~i~~s~~~~~l~~~~~ 340 (359)
..=.|.|+|.+. +++.-..+ ..+.+.+..++ +....+.. -.+.++.++|+|+++.|.....
T Consensus 477 ~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g-~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATG-EIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTC-CEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCC-eEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 345689999998 55432211 23444455554 33222332 4578999999999998877654
No 350
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=20.38 E-value=6.1e+02 Score=24.79 Aligned_cols=112 Identities=17% Similarity=0.210 Sum_probs=58.0
Q ss_pred CceeeEEEeCCCCcEEEEEeCCCcEEEEECCCCccccccccccccCCCCCCCCCCCcEEecC----CCCceEEEEeCCCC
Q 018235 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HKDEGYAIDWNPIT 241 (359)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~ 241 (359)
+.|..|.++|.++.++..+...|.|...+-.. ..+ .++....+ ....+.+|+++|..
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G--~tW-----------------~~i~~~~~~~~~~~~~i~~i~~dp~~ 83 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPST--ETW-----------------IPLLDHFQMDEYSYYGVESIATDPVD 83 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTT--TEE-----------------EECCTTCCGGGGGGGCEEEEEECSSS
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCC--CCE-----------------EECcCccCcccccCCCcceEEeCCCC
Confidence 38999999998766666677667665554222 111 11100000 12358899999866
Q ss_pred CCeEEEEcCC-------CcEEEEecCC-CCcceecCcccc--CC---CCCeEEEEecCCCCCEEEEEe
Q 018235 242 TGRLVTGDCN-------SCIYLWEPAS-DATWNVDPNPFI--GH---SASVEDLQWSPTEPDVFASCS 296 (359)
Q Consensus 242 ~~~l~sgs~d-------g~I~lwd~~~-~~~~~~~~~~~~--~h---~~~V~~v~~sp~~~~~las~s 296 (359)
+..++.+... +...||-... +..|......+. ++ ...+..|+++|..+.++..+.
T Consensus 84 ~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 84 PNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp TTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred CCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 5455444321 1244554433 333432111111 00 123567999998655565555
No 351
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=20.23 E-value=2.6e+02 Score=26.97 Aligned_cols=58 Identities=14% Similarity=0.302 Sum_probs=35.0
Q ss_pred EEEEeCCCCCCeEEEEcCC------------CcEEEEecCCCCcceecCccccCC-CCCeEEEEecCCCCCEEEEE
Q 018235 233 YAIDWNPITTGRLVTGDCN------------SCIYLWEPASDATWNVDPNPFIGH-SASVEDLQWSPTEPDVFASC 295 (359)
Q Consensus 233 ~~l~~sp~~~~~l~sgs~d------------g~I~lwd~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~las~ 295 (359)
=.|.|+|.+. +++.-+.+ ..+.+.+..+ ++.. +.+.+. .+.++.++|+|+++.+|+..
T Consensus 479 DNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-g~~~---rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 479 DGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIR---RFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTT-CCEE---EEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCC-CeEE---EEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4688999986 55544332 1233444443 3322 333343 46789999999998677664
Done!