BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018240
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O07051|LTAA_AERJA L-allo-threonine aldolase OS=Aeromonas jandaei GN=ltaA PE=1 SV=1
Length = 338
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 224/345 (64%), Gaps = 12/345 (3%)
Query: 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGT 63
R +DLRSDTVT+PT+AMR M AEV DDV DP LE A ++GKEA LFVPSGT
Sbjct: 2 RYIDLRSDTVTQPTDAMRQCMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPSGT 61
Query: 64 MGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEA 123
M NL++V+ HC+ RG +LG +HI+ YE G + +G V + V DG++ + + A
Sbjct: 62 MSNLLAVMSHCQ-RGEGAVLGSAAHIYRYEAQGSAVLGSVALQPVPMQADGSLALADVRA 120
Query: 124 AIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNA 183
AI ++ + TRL+CLENTH G+ L + Y + E+ +HGL+LH+DGAR+FNA
Sbjct: 121 AI--APDDVHFTPTRLVCLENTH---NGKVLPLPYLREMRELVDEHGLQLHLDGARLFNA 175
Query: 184 AVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGV 243
VA G VR LV DS S+CLSKGLGAPVGS++VGS FI +ARRLRK +GGGMRQ G+
Sbjct: 176 VVASGHTVRELVAPFDSVSICLSKGLGAPVGSLLVGSHAFIARARRLRKMVGGGMRQAGI 235
Query: 244 LCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303
L A L ALQ++V+ + D DH++A+ LAEGL L G+R+D+ V+TN+V+ ++T
Sbjct: 236 LAQAGLFALQQHVVRLAD-DHRRARQLAEGLAALPGIRLDLAQVQTNMVFLQLTSGE--- 291
Query: 304 AACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQK 348
+A LL ++ G+L +R+V H QI +D+ + F +
Sbjct: 292 SAPLLAFMKARGILF--SGYGELRLVTHLQIHDDDIEEVIDAFTE 334
>sp|Q21890|YF64_CAEEL Uncharacterized protein R102.4 OS=Caenorhabditis elegans GN=R102.4
PE=2 SV=3
Length = 413
Score = 264 bits (675), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 215/348 (61%), Gaps = 7/348 (2%)
Query: 5 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTM 64
++DLRSDTVT P+ MR AMA A V DDV D T RLE A++ GKEAGLFV SGTM
Sbjct: 66 SIDLRSDTVTVPSVEMRRAMAEAIVGDDVYGEDTTTNRLEQRCAELFGKEAGLFVTSGTM 125
Query: 65 GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAA 124
GNL++++ HC+ RG E+I+G +HIH +E G + G+ T++ DGTMD++ IE A
Sbjct: 126 GNLLAIMAHCQ-RGEEIIVGRYNHIHRWEQGNYAQFAGISATTLEVKPDGTMDLNDIEQA 184
Query: 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAA 184
IR + P ++LIC+ENTH GG+ L +E+ SV ++A++ LK+H+DGARI+NAA
Sbjct: 185 IRVKDCHM--PASKLICIENTHNYTGGKALPIEWMRSVKQLAERRDLKVHMDGARIYNAA 242
Query: 185 VALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVL 244
VA V ++ AD+ +C SKGLGAPVGS++VG K+FI +AR RK LGGG RQ G+L
Sbjct: 243 VASNCSVSKIASFADTVQMCFSKGLGAPVGSIVVGPKDFIDRARHSRKALGGGWRQSGIL 302
Query: 245 CAAALVALQENVLVMLDGDHKKAKLLAEGLNQL--KGLRVDVDAVETNIVYFEITE-DSK 301
AAA ++ + DH++AK LA +N + R V A E +I + +
Sbjct: 303 -AAAAHIALDHADATIRADHERAKTLARMINDATPEEFRTKVFAAEKDITNMVLVHCQNG 361
Query: 302 LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349
+ L ++H +L M + R+R+V++ +S ++ + ++K
Sbjct: 362 VTVQQLTDFFQKHDILAMTFDARRIRMVLNWNVSDENLETIVEVYKKF 409
>sp|P58319|LTAE_ECO57 Low specificity L-threonine aldolase OS=Escherichia coli O157:H7
GN=ltaE PE=3 SV=1
Length = 333
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/330 (42%), Positives = 206/330 (62%), Gaps = 15/330 (4%)
Query: 6 VDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMG 65
+DLRSDTVT+P+ AM AM +A V DDV DPT L+ A++ GKEA +F+P+GT
Sbjct: 2 IDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQA 61
Query: 66 NLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAI 125
NL+++L HCE RG E I+G +H +++E GG + +G + P+ + DGT+ +D + I
Sbjct: 62 NLVALLSHCE-RGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI 120
Query: 126 RDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185
+ +I + T+L+ LENTH G+ L EY E ++ L LH+DGARIFNA V
Sbjct: 121 K--PDDIHFARTKLLSLENTH---NGKVLPREYLKDAWEFTRERNLALHVDGARIFNAVV 175
Query: 186 ALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLC 245
A G ++ L Q DS ++CLSKGLG PVGS++VG++++IK+A R RK GGGMRQ G+L
Sbjct: 176 AYGSELKELTQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILA 235
Query: 246 AAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAA 305
AA + AL+ NV L DH A +AE QL+ DV +TN+++ + E++ AA
Sbjct: 236 AAGMYALKNNV-ARLQEDHDNAAWMAE---QLREAGADVMRQDTNMLFVRVGEEN---AA 288
Query: 306 CLLKKLEEHGVLVMPESSTRVRIVVHHQIS 335
L + ++ VL+ +S VR+V H +S
Sbjct: 289 ALGEYMKARNVLI--NASPIVRLVTHLDVS 316
>sp|P75823|LTAE_ECOLI Low specificity L-threonine aldolase OS=Escherichia coli (strain
K12) GN=ltaE PE=1 SV=1
Length = 333
Score = 257 bits (657), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 206/330 (62%), Gaps = 15/330 (4%)
Query: 6 VDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMG 65
+DLRSDTVT+P+ AM AM +A V DDV DPT L+ A++ GKEA +F+P+GT
Sbjct: 2 IDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQA 61
Query: 66 NLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAI 125
NL+++L HCE RG E I+G +H +++E GG + +G + P+ + DGT+ +D + I
Sbjct: 62 NLVALLSHCE-RGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI 120
Query: 126 RDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185
+ +I + T+L+ LENTH G+ L EY E ++ L LH+DGARIFNA V
Sbjct: 121 K--PDDIHFARTKLLSLENTH---NGKVLPREYLKEAWEFTRERNLALHVDGARIFNAVV 175
Query: 186 ALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLC 245
A G ++ + Q DS ++CLSKGLG PVGS++VG++++IK+A R RK GGGMRQ G+L
Sbjct: 176 AYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILA 235
Query: 246 AAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAA 305
AA + AL+ NV L DH A +AE QL+ DV +TN+++ + E++ AA
Sbjct: 236 AAGIYALKNNV-ARLQEDHDNAAWMAE---QLREAGADVMRQDTNMLFVRVGEEN---AA 288
Query: 306 CLLKKLEEHGVLVMPESSTRVRIVVHHQIS 335
L + ++ VL+ +S VR+V H +S
Sbjct: 289 ALGEYMKARNVLI--NASPIVRLVTHLDVS 316
>sp|O13940|GLY1_SCHPO Probable low-specificity L-threonine aldolase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gly1 PE=3 SV=1
Length = 376
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 184/338 (54%), Gaps = 27/338 (7%)
Query: 7 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGN 66
D RSDT+T PT+ MR M A D V D +LE +AK+ GKEA LFV SGT GN
Sbjct: 30 DFRSDTLTVPTDEMRRIMYEASDGDCVYEEDEDTRKLEVYVAKLTGKEAALFVTSGTQGN 89
Query: 67 LISVLVHCETRGSEVILGDNSHIHIYENG--GISTIGGVHPRTVKNNQDGT---MDIDLI 121
+ + H +I D +HI+ +E G G+ T V P + KNN T ++ LI
Sbjct: 90 QLCIRSHLHQPPHSIICDDRAHIYNWEAGAIGLFTQAIVRPISPKNNVYITAEEIENKLI 149
Query: 122 EAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIF 181
+I + T LICLENT G + ++ + +AK H + LH DGAR++
Sbjct: 150 LG------NDIHFSPTGLICLENT---IKGAVVPLDEVARISGLAKAHKIPLHCDGARLW 200
Query: 182 NAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQV 241
+AAVA V ++ DS S+CLSKGL APVGS+IVG ++FI KA+ RK GGG+RQ
Sbjct: 201 DAAVASNVSIKEYCSYFDSVSLCLSKGLAAPVGSIIVGPRDFIAKAKWFRKAYGGGLRQS 260
Query: 242 GVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301
G+L AA L ++Q N +L HK A +AE L G+ ++V ++N+V +
Sbjct: 261 GMLAAAGLYSIQHN-FPLLKQVHKYAIEVAEYAESL-GIELEV-PTQSNMVTL-----AN 312
Query: 302 LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDV 339
+ A L + ++ G+++M RIV H QI+ + V
Sbjct: 313 INVAILCDEAKKSGIILMGP-----RIVFHIQITPDAV 345
>sp|O13427|GLY1_CANAX Low-specificity L-threonine aldolase OS=Candida albicans GN=GLY1
PE=3 SV=1
Length = 374
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 185/347 (53%), Gaps = 25/347 (7%)
Query: 7 DLRSDTVTKPTEAM-RAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMG 65
+ RSDT T PT AM +A D V D T RLE++M ++ GK A LF SGTM
Sbjct: 14 EFRSDTFTVPTRAMVEDGFMNATFGDSVYQEDETTLRLESKMCEITGKPAALFCVSGTMS 73
Query: 66 NLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG--VHPRTVKNNQDGTMDIDLIEA 123
N I + + ++ +H+ ++E GG++T+ VHP N T + D++
Sbjct: 74 NQIGLRANLVQPPYSILCDYRAHVFLHEAGGLATLSQAMVHPVRPSNGNYLTFE-DVLGN 132
Query: 124 AIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNA 183
D G+I T++I LENT G + +E + E +++ ++LH+DGAR++NA
Sbjct: 133 VTYDDDGDIHAAPTKVISLENT---LHGIIIPIEEIRKISEFCRENDIRLHLDGARLWNA 189
Query: 184 AVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGV 243
+VA G+ ++ DS S+CLSK LGAP+GSV+VG ++FI+KA +K GGG+RQ G+
Sbjct: 190 SVATGISIKEYCSYFDSVSLCLSKSLGAPIGSVLVGDEKFIRKANHFKKQSGGGIRQAGI 249
Query: 244 LCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303
+ A A+ A+ N L L+ H AK + + Q G++++ V+T++V+ ++ +
Sbjct: 250 MSAMAIHAIDYN-LSKLELSHNYAKQIGD-FCQEHGIKLE-SPVDTSLVFLDLKAN---- 302
Query: 304 AACLLKKLEEHGVLVMPESSTRV-----RIVVHHQISANDVHYTLSC 345
K++ + ++ + + V RI H Q+S V C
Sbjct: 303 ------KMDPNRLVELGRTKYNVKLMGQRIACHFQLSQESVDNVKKC 343
>sp|O74267|GLY1_ASHGO Low-specificity L-threonine aldolase OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=GLY1 PE=3 SV=3
Length = 382
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 190/358 (53%), Gaps = 19/358 (5%)
Query: 7 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGN 66
D RSDT T PT M A +A + D V D +LE +AK+ G EAG+F SGT+ N
Sbjct: 17 DFRSDTFTTPTREMIEAALTATIGDAVYQEDIDTLKLEQHVAKLAGMEAGMFCVSGTLSN 76
Query: 67 LISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG--VHPRTVKNNQDGTMDIDLIEAA 124
I++ H ++ +H++ +E G++ + V P N T++ D+ +
Sbjct: 77 QIALRTHLTQPPYSILCDYRAHVYTHEAAGLAILSQAMVTPVIPSNGNYLTLE-DIKKHY 135
Query: 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAA 184
I D G+I T++I LENT G +E + ++ L+LH DGARI+NA+
Sbjct: 136 IPD-DGDIHGAPTKVISLENT---LHGIIHPLEELVRIKAWCMENDLRLHCDGARIWNAS 191
Query: 185 VALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVL 244
GVP+++ + DS S+CLSK +GAP+GS++VGS +FIKKA RK GGG+RQ G++
Sbjct: 192 AESGVPLKQYGELFDSISICLSKSMGAPMGSILVGSHKFIKKANHFRKQQGGGVRQSGMM 251
Query: 245 CAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304
C A+VA+Q + + H+ A LA + G+ ++ A +TN V+ ++ + SK+
Sbjct: 252 CKMAMVAIQGDWKGKMRRSHRMAHELARFCAE-HGIPLESPA-DTNFVFLDL-QKSKMNP 308
Query: 305 ACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDV----HYTLSCFQKIYAGVCEENG 358
L+KK ++G +M R+ H+QIS + L F+ +ENG
Sbjct: 309 DVLVKKSLKYGCKLMGG-----RVSFHYQISEESLEKIKQAILEAFEYSKKNPYDENG 361
>sp|P37303|GLY1_YEAST Low specificity L-threonine aldolase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GLY1 PE=1 SV=2
Length = 387
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 180/334 (53%), Gaps = 11/334 (3%)
Query: 2 VTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPS 61
+T DLRSDT T PT M A A + D V D RLE +A++ GKEAGLF S
Sbjct: 11 ITAANDLRSDTFTTPTAEMMEAALEASIGDAVYGEDVDTVRLEQTVARMAGKEAGLFCVS 70
Query: 62 GTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLI 121
GT+ N I++ H ++ +H++ +E G++ + V + + ++ I
Sbjct: 71 GTLSNQIAIRTHLMQPPYSILCDYRAHVYTHEAAGLAILSQAMVVPVVPSNGDYLTLEDI 130
Query: 122 EAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIF 181
++ G+I TRLI LENT G +E + ++GLKLH DGARI+
Sbjct: 131 KSHYVPDDGDIHGAPTRLISLENT---LHGIVYPLEELVRIKAWCMENGLKLHCDGARIW 187
Query: 182 NAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQV 241
NAA GVP+++ + DS S+CLSK +GAP+GSV+VG+ +F+KKA RK GGG+RQ
Sbjct: 188 NAAAQSGVPLKQYGEIFDSISICLSKSMGAPIGSVLVGNLKFVKKATHFRKQQGGGIRQS 247
Query: 242 GVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301
G++ ALV + + L H A LAE + KG+ ++ A +TN V+ + + ++
Sbjct: 248 GMMARMALVNINNDWKSQLLYSHSLAHELAE-YCEAKGIPLESPA-DTNFVFINL-KAAR 304
Query: 302 LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQIS 335
+ L+KK ++ V +M R+ H+Q++
Sbjct: 305 MDPDVLVKKGLKYNVKLMGG-----RVSFHYQVT 333
>sp|Q9UW18|TOXG_COCCA Alanine racemase TOXG OS=Cochliobolus carbonum GN=TOXG PE=3 SV=1
Length = 389
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 186/361 (51%), Gaps = 21/361 (5%)
Query: 7 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGN 66
D RSD +T+P+ M +A+ + DDV D T E +A++ G+E G+FV +GTM N
Sbjct: 39 DFRSDVITRPSLRMLSAVLKTTLGDDVFREDLTTAHFEAHVAEISGREEGMFVITGTMAN 98
Query: 67 LISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDI-DLIEAAI 125
+ + TR ++L SH YE GG S + G + V+ + + + DL E AI
Sbjct: 99 QLCLHALVSTRPCGILLSSESHAIHYEAGGSSMLSGAMLQPVQPSNGKYLRVEDLEEHAI 158
Query: 126 RDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185
++ T ++ +ENT GG + V + + AK++ ++ H+DGAR+F A
Sbjct: 159 L--TDDVHKCPTSIVSMENT---AGGAVVPVHELRRIRDWAKQNNVRTHLDGARLFEAVA 213
Query: 186 ALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLC 245
++ D SV SK LGAP+G++I+G K+ I++ RR RK +GGGMRQ GV+
Sbjct: 214 TGAGTLKEYCSLIDLVSVDFSKNLGAPMGAMILGDKKLIQQMRRTRKGIGGGMRQGGVIT 273
Query: 246 AAALVALQENVLVMLDGD-------HKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITE 298
AAA AL EN + + + HK AK L E + KG ++ + +ETNI++ ++ +
Sbjct: 274 AAAREALFENFGLGAEIESQTLLQVHKVAKRLGEEWTR-KGGKLSKE-IETNIIWLDL-D 330
Query: 299 DSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEENG 358
+ + + K E+GV++ RIV HHQI V + F I +N
Sbjct: 331 AVGIKKSQFIDKGREYGVIL-----DGCRIVCHHQIDIYAVEALIDVFHDILKADPIKNK 385
Query: 359 N 359
N
Sbjct: 386 N 386
>sp|Q9HTF1|LTAE_PSEAE Low specificity L-threonine aldolase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=ltaE PE=3 SV=1
Length = 346
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 121/313 (38%), Gaps = 30/313 (9%)
Query: 1 MVTRTVDLRSDTVTKPTEAMRAAMASAEV-------DDDVLMHDPTAFR--LETEMAKVM 51
M T SD + AAMA A DD FR ET+
Sbjct: 1 MTDHTQQFASDNYSGICPEAWAAMAEANRGHERAYGDDQWTARASDYFRQLFETDCEV-- 58
Query: 52 GKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN 111
F +GT N +++ C++ S VI + +H+ E G +
Sbjct: 59 -----FFAFNGTAANSLALAALCQSYHS-VICSETAHVETDECGAPEFFSNGSKLLLAQT 112
Query: 112 QDGTMDIDLIEAAIRD---PKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168
+ G L A+IRD + +I YP R++ L T A G + ++ K+
Sbjct: 113 EVGK----LTPASIRDIALKRQDIHYPKPRVVTL--TQATEVGTVYRPDELKAISATCKE 166
Query: 169 HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCL-SKGLGAPVGSVIVGSKEFIKKA 227
GL LH+DGAR NA LG L A +C G VG I+ + +
Sbjct: 167 LGLHLHMDGARFSNACAFLGCSPAELSWKAGVDVLCFGGTKNGMAVGEAILFFNRDLAED 226
Query: 228 RRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDH--KKAKLLAEGLNQLKGLRVDVD 285
R G + AA V + ++ + DH + A+LLAE + + G+ + +
Sbjct: 227 FDYRCKQAGQLASKMRFLAAPWVGVLQDDAWLRYADHANRCARLLAELVADVPGVSL-MF 285
Query: 286 AVETNIVYFEITE 298
VE N V+ +++E
Sbjct: 286 PVEANGVFLQLSE 298
>sp|O50584|LTAE_PSEUN Low specificity L-threonine aldolase OS=Pseudomonas sp. (strain
NCIMB 10558) GN=ltaE PE=1 SV=1
Length = 346
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 26/254 (10%)
Query: 57 LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTM 116
F +GT N +++ C++ S VI + +H+ E G ++ G
Sbjct: 59 FFAFNGTAANSLALSSLCQSYHS-VICSETAHVETDECGAPEFFSNGSKLLTARSEGGK- 116
Query: 117 DIDLIEAAIRD---PKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKL 173
L A+IR+ + +I YP R++ + T A G + ++ K+ GL L
Sbjct: 117 ---LTPASIREVALKRQDIHYPKPRVVTI--TQATEVGSVYRPDELKAISATCKELGLNL 171
Query: 174 HIDGARIFNAAVALGVPVRRLVQAADSASVCL-SKGLGAPVGSVIVGSKEFIKKARRLRK 232
H+DGAR NA LG L A +C G VG I+ F R+L +
Sbjct: 172 HMDGARFSNACAFLGCTPAELTWKAGIDVLCFGGTKNGMAVGEAIL----FFN--RKLAE 225
Query: 233 TLGGGMRQVGVLC------AAALVALQENVLVMLDGDHKK--AKLLAEGLNQLKGLRVDV 284
+Q G L +A V L E+ + H A+LL+ + + G+ + +
Sbjct: 226 DFDYRCKQAGQLASKMRFLSAPWVGLLEDGAWLRHAAHANHCAQLLSSLVADIPGVEL-M 284
Query: 285 DAVETNIVYFEITE 298
VE N V+ +++E
Sbjct: 285 FPVEANGVFLQMSE 298
>sp|Q9K8V5|ARGD_BACHD Acetylornithine aminotransferase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=argD PE=3 SV=1
Length = 384
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 28/327 (8%)
Query: 34 LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYE 93
L H P + + + G +A F SG N ++ + + G I+ H
Sbjct: 67 LFHIPIQENVAALLTEQSGMDAVFFCNSGAEANEAAIKLARKATGKHEIVTFTQSFHGRT 126
Query: 94 NGGISTIG------GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147
G +S G G P + DI AA++ ++V T I LE
Sbjct: 127 LGTMSATGQDKIKTGFGPMLETFHHVPFNDI----AALK----QVVNEQTAAIVLEVIQG 178
Query: 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSK 207
G + E+ SV + ++HG+ L ID + ++ D +V
Sbjct: 179 EGGVNLIDPEFAASVNHVCQEHGILLIIDEIQTGIGRTGTAFAFQQYELTPDIITVAKGL 238
Query: 208 GLGAPVGSVIVGSKEFIK--KARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHK 265
G G PVG+++ G + I A T GG + A Q N L +
Sbjct: 239 GNGFPVGAML-GKQHLIDAFSAGSHGSTFGGNPLAMAAAQAVLTEVFQPN---FLQAVQE 294
Query: 266 KAKLLAEGLNQ-LKGLRVDVDAVETN--IVYFEITEDSKLYAACLLKKLEEHGVLVMPES 322
K K L GLN+ L GL + V + N +V E+ E+ A +K+L E G+LV+
Sbjct: 295 KGKQLLSGLNEALSGLEI-VKEIRGNGLLVGIELQEE----GAPFIKQLREKGLLVLNAG 349
Query: 323 STRVRIVVHHQISANDVHYTLSCFQKI 349
+R++ +++ ++H ++ +++
Sbjct: 350 PNVIRLLPPLVVTSEELHEAVTQLKEV 376
>sp|P13254|MEGL_PSEPU Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2
Length = 398
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 9 RSDTVTKPTEAMRAAMASAEVDDDVL--MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGN 66
++ T T PT AA + E + +PT LE MA + G EAGL + SG MG
Sbjct: 34 QTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLALASG-MGA 92
Query: 67 LISVLVHCETRGSEVILGDNSH--IHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAA 124
+ S L G EV+LG+ + + + GI G VK D+ +EAA
Sbjct: 93 ITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFG------VKLRHVDMADLQALEAA 146
Query: 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAA 184
+ P TR+I E+ AN + V +IA+KHG + +D
Sbjct: 147 MT--------PATRVIYFESP-ANPNMHMADIA---GVAKIARKHGATVVVDNTYC---- 190
Query: 185 VALGVPV--RRLVQAAD----SASVCLSKGLGAPVGSVIVGSKEFIKKAR 228
P R L AD SA+ LS G G ++VGS+ + + R
Sbjct: 191 ----TPYLQRPLELGADLVVHSATKYLS-GHGDITAGIVVGSQALVDRIR 235
>sp|Q8TV92|MFNA_METKA L-tyrosine decarboxylase OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=mfnA PE=3 SV=1
Length = 372
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 146/351 (41%), Gaps = 59/351 (16%)
Query: 38 PTAFRLETE----MAKVM-----GKEA-GLFVPSGTMGNLISVLVHCE-TRGSEVILGDN 86
P A+R E E +A+ + +EA G V GT N+++ E T G E+I+
Sbjct: 45 PNAYRAERECIGWLAETLLDHPAPEEAEGSIVSGGTEANILAAYAAREVTGGREIIVPAT 104
Query: 87 SHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAI-RDPKGEIVYPTTRLICLENT 145
H + + + V D T+D+D ++ I RD T ++ + T
Sbjct: 105 RHFSFEKAARMLRMKLVE---APLRSDYTVDVDAVQDLISRD--------TALIVGIVGT 153
Query: 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV----PVRRL---VQAA 198
SV+ +++ ++A+ HG+ LH+D A F A + P+ R ++A
Sbjct: 154 TETG-----SVDDIEALSDVAEDHGVPLHVDAA--FGGFTAPFLREEYPLPRFGFDLEAV 206
Query: 199 DSASVCLSK-GL-GAPVGSVIVGSKEFIKKARRLRKTL-GGGMRQ---VGVLCAAALVAL 252
S +V K GL P G ++ EF K L GGG Q G A ++AL
Sbjct: 207 VSVTVDPHKMGLVPPPAGGIVFRDDEFPKAIEVYAPYLSGGGASQYTITGTRPGAPVLAL 266
Query: 253 QENVLVMLDGDHKKAKL--------LAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304
N+L + + +++ +AE +L GL + VD N+V + + A
Sbjct: 267 YANILELGEEGYRRIAFRCYEETLKVAEKAREL-GLELAVDPPHLNLVNIRLPDRGT--A 323
Query: 305 ACLLKKLEEHGVLVMPESSTR---VRIVVHHQISANDVHYTLSCFQKIYAG 352
LL++ E G + ST+ VRIV+ + A V L ++ G
Sbjct: 324 ERLLRESEREGWKI--SVSTKPLGVRIVMMPHLDAETVSRFLELVARVLGG 372
>sp|C5CF44|GCSPB_KOSOT Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Kosmotoga olearia (strain TBF 19.5.1) GN=gcvPB PE=3
SV=1
Length = 483
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 23/148 (15%)
Query: 41 FRLETEMAKVMGKEAGLFVPS-GTMGNLISVLV---HCETRG----SEVILGDNSHIHIY 92
+RL+T ++++ G +A P+ G G L +L+ + E +G ++VI+ D++H
Sbjct: 112 YRLQTLLSEITGMDAFTLQPAAGAHGELTGMLIVKKYFEVKGENQRTKVIVPDSAH---G 168
Query: 93 ENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152
N +++ G +K+N +G +D+D +EAA+ + I+ T+ N G
Sbjct: 169 TNPASASMAGFQVVEIKSNDNGIIDLDNLEAALDESVAAIML----------TNPNTLG- 217
Query: 153 CLSVEYTDSVGEIAKKHGLKLHIDGARI 180
L + + E+A K+G L+ DGA +
Sbjct: 218 -LFEKDIIKIAEMAHKNGTLLYYDGANL 244
>sp|Q64611|CSAD_RAT Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus GN=Csad
PE=1 SV=1
Length = 493
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 56 GLFVPSGTMGNLISV-------LVHCETRGSE------VILGDNSHIHIYENGGISTIGG 102
G+F P G++ N+ ++ C+ RG + H I + +G
Sbjct: 146 GVFCPGGSISNMYAINLARFQRYPDCKQRGLRALPPLALFTSKECHYSITKGAAFLGLGT 205
Query: 103 VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDS 161
R VK ++ G M + +E I + E P A G L + + D+
Sbjct: 206 DSVRVVKADERGKMIPEDLERQISLAEAEGSVPFL-------VSATSGTTVLGAFDPLDA 258
Query: 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGA 211
+ ++ ++HGL LH+D A + +V L R L +Q ADS + K L A
Sbjct: 259 IADVCQRHGLWLHVDAA--WGGSVLLSRTHRHLLDGIQRADSVAWNPHKLLAA 309
>sp|Q9Y600|CSAD_HUMAN Cysteine sulfinic acid decarboxylase OS=Homo sapiens GN=CSAD PE=1
SV=2
Length = 493
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 56 GLFVPSGTMGNLISV-------LVHCETRGSE------VILGDNSHIHIYENGGISTIGG 102
G+F P G++ N+ +V C+ RG + H I + +G
Sbjct: 146 GIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGT 205
Query: 103 VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDS 161
R VK ++ G M + +E I + E P A G L + + ++
Sbjct: 206 DSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFL-------VSATSGTTVLGAFDPLEA 258
Query: 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGA 211
+ ++ ++HGL LH+D A + +V L R L +Q ADS + K L A
Sbjct: 259 IADVCQRHGLWLHVDAA--WGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAA 309
>sp|P71602|BIOF2_MYCTU Putative 8-amino-7-oxononanoate synthase 2 OS=Mycobacterium
tuberculosis GN=bioF2 PE=3 SV=1
Length = 771
Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 32/194 (16%)
Query: 43 LETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG 102
LE E+A +GK A + +G NL ++ CE+ G +I +H +++ +S G
Sbjct: 466 LEQELACFLGKPAAVLCSTGYQSNLAAISALCES-GDMIIQDALNHRSLFDAARLS---G 521
Query: 103 VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162
++N D+D + +R +G R+I ++ + G +V ++
Sbjct: 522 ADFTLYRHN-----DMDHLARVLRRTEGR-----RRIIVVDAVFSMEG----TVADLATI 567
Query: 163 GEIAKKHGLKLHIDGARIF--------NAAVALGVPVRRLVQAADSASVCLSKGLGAPVG 214
E+A +HG ++++D + A+ ALGV R D SK A VG
Sbjct: 568 AELADRHGCRVYVDESHALGVLGPDGRGASAALGVLAR-----MDVVMGTFSKSF-ASVG 621
Query: 215 SVIVGSKEFIKKAR 228
I G + + R
Sbjct: 622 GFIAGDRPVVDYIR 635
>sp|Q0C406|TNAA_HYPNA Tryptophanase OS=Hyphomonas neptunium (strain ATCC 15444) GN=tnaA
PE=3 SV=1
Length = 454
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 110/290 (37%), Gaps = 42/290 (14%)
Query: 6 VDLRSDTVTKPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM------------G 52
+DL +D+ T AM AA A + D+ P+ +R E + +M
Sbjct: 45 IDLLTDSGTS---AMSAAQWGAVMTGDESYAGAPSFYRFEAAVKDLMDFTHIIPAHQGRA 101
Query: 53 KEAGLFVPSGTMGNLISVLVHCET-RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN 111
E LF G+LI H +T RG+ +G + G + ++ HP
Sbjct: 102 AEHLLFSLIAKTGDLIPSNTHFDTTRGNIEAMGAEALDLPIAEGRVPSLD--HPFK---- 155
Query: 112 QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGL 171
G MD+ +E + + G I P + N GG+ +S+E +AK HG
Sbjct: 156 --GNMDLAALERVLTEEGGRI--PAVMMTITNNA---GGGQPVSLENIRGAARLAKAHGK 208
Query: 172 KLHIDGARIFNAAVALGVP------------VRRLVQAADSASVCLSKGLGAPVGSVIVG 219
+IDG R A + + VR AD ++ K A +G +
Sbjct: 209 AFYIDGCRFAENAWFIKLREEGQKDRSIKEIVRETFALADGMTMSAKKDAFANIGGWLAL 268
Query: 220 SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKL 269
+ + + + R G G L L A+ + + ++D D+ + ++
Sbjct: 269 NNDALAERARTLLIQTEGFPTYGGLAGRDLDAIAQGLKEIIDEDYLRYRV 318
>sp|B0KC20|BIOF_THEP3 8-amino-7-oxononanoate synthase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E)
GN=Teth39_0287 PE=3 SV=1
Length = 395
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 204 CLSKGLGAPVGSVIVGSKEFIKKAR-RLRKTLGGGMRQVGVLCAAALVALQENVLVMLDG 262
LSK +G VG + G +E I+ R R L L AA+ A E + ++ +
Sbjct: 240 TLSKAIGV-VGGYVAGKRELIEWLNHRGRPFLFST-----ALPPAAVAASIEAINILSES 293
Query: 263 DHKKAKLLAEGL---NQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL-- 317
D KL +LK L D ET I I E++K A +KL E GV
Sbjct: 294 DALTRKLWDNAKYFKEKLKSLGFDTGKSETPITPVIIGEETK--ALEFSRKLFEEGVFAQ 351
Query: 318 -----VMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349
+P++ RVR +V + D+ L F+K+
Sbjct: 352 GIVYPTVPKNKARVRTIVTAAHTKEDLDAALKAFEKV 388
>sp|B0K590|BIOF_THEPX 8-amino-7-oxononanoate synthase OS=Thermoanaerobacter sp. (strain
X514) GN=Teth514_0779 PE=3 SV=1
Length = 395
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 204 CLSKGLGAPVGSVIVGSKEFIKKAR-RLRKTLGGGMRQVGVLCAAALVALQENVLVMLDG 262
LSK +G VG + G +E I+ R R L L AA+ A E + ++ +
Sbjct: 240 TLSKAIGV-VGGYVAGKRELIEWLNHRGRPFLFST-----ALPPAAVAASIEAINILSES 293
Query: 263 DHKKAKLLAEGL---NQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL-- 317
D KL +LK L D ET I I E++K A +KL E GV
Sbjct: 294 DALTRKLWDNAKYFKEKLKSLGFDTGKSETPITPVIIGEETK--ALEFSRKLFEEGVFAQ 351
Query: 318 -----VMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349
+P++ RVR +V + D+ L F+K+
Sbjct: 352 GIVYPTVPKNKARVRTIVTAAHTKEDLDAALKAFEKV 388
>sp|A7Z6M2|GCSPB_BACA2 Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvPB
PE=3 SV=1
Length = 491
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 62 GTMGNLISVLVHCETRG----SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMD 117
G L+ + + E RG ++VI+ D++H N +T+ G TVK+N+ G +D
Sbjct: 143 GEWTGLMMIRAYHEARGDFGRTKVIVPDSAHG---TNPASATVAGFETITVKSNEHGLVD 199
Query: 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177
I+ ++ A+ + ++ T+ N G L E + EI + G KL+ DG
Sbjct: 200 IEDLKRAVNEETAALML----------TNPNTLG--LFEENITEMAEIVHQAGGKLYYDG 247
Query: 178 ARIFNAAVALGVP 190
A + NA ++ P
Sbjct: 248 ANL-NAVLSKARP 259
>sp|A7HMM1|BIOF_FERNB 8-amino-7-oxononanoate synthase OS=Fervidobacterium nodosum (strain
ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1307 PE=3 SV=1
Length = 395
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 51/329 (15%)
Query: 43 LETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGD-NSHIHIYENGGISTIG 101
LE +A+ G +A +F+ SG + N ++ + GD N I E S I
Sbjct: 89 LEKALAEFKGADATIFLQSGFIANQAAI---------PTVFGDENDAIISDELNHASIID 139
Query: 102 GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161
GV K D++ +EA +++ + V R++ + + + G +
Sbjct: 140 GVRLSKAKRYVYKHNDMNELEARLKEARD--VQKARRILIITDGVFSMDGDIAPLP---E 194
Query: 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ------AADSASVCLSKGLGAPVGS 215
+ E+A+K+ + +D A + LG R +V D LSK G +G
Sbjct: 195 IVELAEKYEAAVMVDDA---HGEGVLGRGGRGIVDHFGLHGRVDMEIGTLSKAFGV-LGG 250
Query: 216 VIVGSKEFIK----KARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271
I G + I+ KAR + G L A + A E V ++ + D ++ K L
Sbjct: 251 YIAGKETLIRYLKQKARPFLFSTG--------LTPADVAACLEAVKILQESD-ERVKRLW 301
Query: 272 EGLN----QLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL-------VMP 320
+ N ++K L D+ +T I + D+K+ A+ ++L E G+ +P
Sbjct: 302 DNANYFKSEMKKLGFDLGVSQTPITPVMLY-DAKV-ASQFSRELFEEGIFAQSIGYPTVP 359
Query: 321 ESSTRVRIVVHHQISANDVHYTLSCFQKI 349
+ R+R+++ + D+ + L F+K+
Sbjct: 360 KGKARIRVMISAVHTKEDLDFALDKFEKV 388
>sp|Q21FY4|BIOF_SACD2 8-amino-7-oxononanoate synthase OS=Saccharophagus degradans (strain
2-40 / ATCC 43961 / DSM 17024) GN=bioF PE=3 SV=1
Length = 397
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 129/339 (38%), Gaps = 47/339 (13%)
Query: 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG 95
H +LE E+A G+ L +G M N+ V+ RG V +H + + G
Sbjct: 84 HSQEHHQLEEELAAFTGRPRALLFSTGYMANM-GVINGLLGRGDAVFQDKLNHASLLDGG 142
Query: 96 GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155
IS G ++N ++ L E +LI ++ + G
Sbjct: 143 LIS---GAKFHRFRHNDCEHLNTQL----------EKSTAARKLIVVDGVFSMDG----D 185
Query: 156 VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAA----DSASV---CLSKG 208
+ + AKKH L +D A F +G + +V A D + L K
Sbjct: 186 AANLNQLAASAKKHNAWLMVDDAHGFGC---MGENGKGVVDACGLTLDDVPILMGTLGKA 242
Query: 209 LGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAK 268
G G+ + GS+ I+ +L +T A+ A L +L+ +H + +
Sbjct: 243 FGT-FGAFVAGSETLIEALIQLARTY-----VYTTALPPAVAAATRASLHLLETEHWRRE 296
Query: 269 LLAEGLNQLKG----LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLV------ 318
L + Q +G L + + ++ I + ED+ A + KK+ E G +
Sbjct: 297 KLNALIQQFRGGCEALNLQLMPSQSPIQPIVLGEDA--VALNVSKKMAERGFWITAIRPP 354
Query: 319 -MPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356
+PE + R+RI + + S DV L+ ++ V E
Sbjct: 355 TVPEGTARLRITLSAEHSEQDVEQLLNALAEVMREVSGE 393
>sp|Q9DBE0|CSAD_MOUSE Cysteine sulfinic acid decarboxylase OS=Mus musculus GN=Csad PE=2
SV=1
Length = 493
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 26/173 (15%)
Query: 56 GLFVPSGTMGNLISV-------LVHCETRGSE------VILGDNSHIHIYENGGISTIGG 102
G+F P G++ N+ ++ C+ RG + H I + +G
Sbjct: 146 GVFCPGGSISNMYAMNLARFQRYPDCKQRGLRALPPLALFTSKECHYSITKGAAFLGLGT 205
Query: 103 VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDS 161
R VK ++ G M + +E I + E P A G L + + D+
Sbjct: 206 DSVRVVKADERGRMIPEDLERQIILAEAEGSVPFL-------VSATSGTTVLGAFDPLDA 258
Query: 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGA 211
+ ++ ++HGL H+D A + +V L R L +Q ADS + K L A
Sbjct: 259 IADVCQRHGLWFHVDAA--WGGSVLLSRTHRHLLDGIQRADSVAWNPHKLLAA 309
>sp|Q894M8|TNAA_CLOTE Tryptophanase OS=Clostridium tetani (strain Massachusetts / E88)
GN=tnaA PE=3 SV=1
Length = 472
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 85 DNSHIHIYENGGISTIGGVHPR----TVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140
D + H+ E G I V P TV+ G MD++ +E I++ + + ++
Sbjct: 138 DTTRAHV-ELSGARAIDCVVPEASDPTVRIPFKGNMDVEKLEKLIKEHGADKI----GVV 192
Query: 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGAR 179
+ T+ + GG+ +S+E EI KK+ ++L ID AR
Sbjct: 193 VMTITNNSAGGQPVSIENMKETAEICKKYNIRLCIDAAR 231
>sp|Q9LF46|HACL_ARATH 2-hydroxyacyl-CoA lyase OS=Arabidopsis thaliana GN=HACL PE=2 SV=1
Length = 572
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 102 GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL--SVEYT 159
G P+ K+ + +D+ E +R P IV +I L N CL S +
Sbjct: 293 GESPKWDKDVKFILVDVSEEEIELRKPHLGIVGDAKTVIGLLNREIKDDPFCLGKSNSWV 352
Query: 160 DSVGEIAKKHGLKLHIDGAR---IFNAAVALGVPVRRLVQAADSAS-VCLSKGLGAPVGS 215
+S+ + AK++G K+ I A+ FN + + +R + A + S V +S+G +
Sbjct: 353 ESISKKAKENGEKMEIQLAKDVVPFNFLTPMRI-IRDAILAVEGPSPVVVSEG----ANT 407
Query: 216 VIVGSKEFIKKARRLRKTLG-GGMRQVGV-LCAAALVALQENVLVMLDGD 263
+ VG ++K R R G G VG+ C AA VA + ++V ++GD
Sbjct: 408 MDVGRSVLVQKEPRTRLDAGTWGTMGVGLGYCIAAAVASPDRLVVAVEGD 457
>sp|A8MEG7|GCSPB_ALKOO Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Alkaliphilus oremlandii (strain OhILAs) GN=gcvPB PE=3
SV=1
Length = 486
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 41 FRLETEMAKVMGKEAGLFVPS-GTMGNLISVLV---HCETRG----SEVILGDNSHIHIY 92
++L+ +A+V G E P+ G G L+ ++V + + RG +++I+ D++H
Sbjct: 118 YKLDKMLAEVAGMERMTLQPAAGAHGELVGLMVIKAYHKKRGDLKRTKIIIPDSAHG--- 174
Query: 93 ENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRD 127
N + + G +K+N DG+++ID +++A+ D
Sbjct: 175 TNPASAAVAGFDVVEIKSNPDGSVNIDSLKSALSD 209
>sp|A6QM00|GADL1_BOVIN Glutamate decarboxylase-like protein 1 OS=Bos taurus GN=GADL1 PE=2
SV=2
Length = 521
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 17 TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG--LFVPSGTMGNLISV---- 70
TEA+ ++ + EV L+ + + +M + +G + G +F P G++ N+ ++
Sbjct: 136 TEALNPSVYTYEVSPVFLLVEEAVLK---KMIEFIGWKEGDGIFNPGGSVSNMYAMNLAR 192
Query: 71 LVHC---ETRG----SEVILGDNSHIH--IYENGGISTIGGVHPRTVKNNQDGTMDIDLI 121
+C + +G +IL ++ H + ++ IG + V+ + G M + +
Sbjct: 193 YKYCPDIKEKGLSGLPRLILFTSAECHYSMKKSASFLGIGTENVCFVETDGRGKMIPEEL 252
Query: 122 EAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARI 180
E +++ K E P L+C A G L + + D + +I ++HGL LH+D +
Sbjct: 253 EKRVQEAKKEGAAPF--LVC-----ATSGTTVLGAFDPLDEIADICERHGLWLHVDAS-- 303
Query: 181 FNAAVALGVPVRRLVQA---ADSASVCLSKGLGA 211
+ + + RRL+Q ADS + K L A
Sbjct: 304 WGGSALMSRKHRRLLQGIHRADSVAWNPHKMLMA 337
>sp|A8AKE2|TNAA_CITK8 Tryptophanase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC
4225-83 / SGSC4696) GN=tnaA PE=3 SV=1
Length = 462
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 85 DNSHIHIYENGGISTIGGVHPR----TVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140
D + H+ NG I V P+ T + G DIDL+ A I + E V I
Sbjct: 128 DTTAAHVELNGA-KAINVVTPKAFDTTSWYDWKGNFDIDLLNATIAEHGAENV----AAI 182
Query: 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARI 180
T + GG+ +S+ V +IAK+H + + ID AR
Sbjct: 183 ITTVTCNSSGGQPVSIANMREVYQIAKRHNIPVVIDSARF 222
>sp|Q43908|DDC_ACIBA L-2,4-diaminobutyrate decarboxylase OS=Acinetobacter baumannii
GN=ddc PE=1 SV=1
Length = 510
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 41/185 (22%)
Query: 54 EAGLFVPSGTMGNLISVLV---HC-----------------------ETRGSEVILGDNS 87
+AG+F GT NL+ VL+ C + +VI +N+
Sbjct: 145 QAGVFTSGGTQSNLMGVLLARDWCIAKNWKDENGNPWSVQRDGIPAEAMKNVKVICSENA 204
Query: 88 HIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIR--DPKGEIVYPTTRLICLENT 145
H + +N + +G TV N++ MD+D +E + +G++V C+ T
Sbjct: 205 HFSVQKNMAMMGMGFQSVVTVPVNENAQMDVDALEKTMAHLQAEGKVV------ACVVAT 258
Query: 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSAS 202
++ + EI K+G +HID A + A+ L R + ++ +DS +
Sbjct: 259 AGTTDAG--AIHPLKKIREITNKYGSWMHIDAA--WGGALILSNTYRAMLDGIELSDSIT 314
Query: 203 VCLSK 207
+ K
Sbjct: 315 LDFHK 319
>sp|A6LMP4|BIOF_THEM4 8-amino-7-oxononanoate synthase OS=Thermosipho melanesiensis
(strain BI429 / DSM 12029) GN=Tmel_1346 PE=3 SV=1
Length = 391
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 125/327 (38%), Gaps = 51/327 (15%)
Query: 43 LETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG 102
LE +AK EA +F+ SG + N ++ T + IL D E S I G
Sbjct: 89 LEETLAKFKKVEATIFLQSGFVAN--QAVIPAITNEEDAILSD-------ELNHASIIDG 139
Query: 103 VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162
V K DI +E +++ K +LI + + G E +
Sbjct: 140 VRLSKAKRFVWKHRDIKDLEEKLKEAKD----ARRKLIITDGVFSMDGDLAPLPE----I 191
Query: 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ------AADSASVCLSKGLGAPVGSV 216
E+A+K+ + +D A + LG R +V D LSK G +G
Sbjct: 192 VELAEKYNAMVMVDDA---HGEGVLGSHGRGIVDHFGLHGRVDIEIGTLSKAFGV-LGGY 247
Query: 217 IVGSKEFI----KKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272
I G KE I +KAR + L A A E ++ + D + +L
Sbjct: 248 IAGKKELIDYLKQKARPFLFS--------SPLSPADTAAALEATKILQESDERVKRLWDN 299
Query: 273 GL---NQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL-------VMPES 322
++K L D ET I + D+KL + K+L E G+ +P+
Sbjct: 300 AKYFKEEMKKLGFDTGESETPITPV-MLYDAKL-STQFSKELFEEGIFAQSIGYPTVPKG 357
Query: 323 STRVRIVVHHQISANDVHYTLSCFQKI 349
R+R+++ + D+ + L F+K+
Sbjct: 358 KARIRVMISAVHTKEDLDFALEKFEKV 384
>sp|O49543|NFS1_ARATH Cysteine desulfurase 1, mitochondrial OS=Arabidopsis thaliana
GN=NIFS PE=1 SV=1
Length = 453
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLK 172
DG +D++++ AIR P T L+ + + G V+ + +G I K+H +
Sbjct: 177 DGLVDLEMLREAIR--------PDTGLVSIMAVNNEIG----VVQPMEEIGMICKEHNVP 224
Query: 173 LHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIK------- 225
H D A+ A + V V++ A S S G VG++ V + I+
Sbjct: 225 FHTDAAQ---AIGKIPVDVKKWNVALMSMSAHKIYGPKG-VGALYVRRRPRIRLEPLMNG 280
Query: 226 --KARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVD 283
+ R LR G + VG AA +A++E ++ D K K L E L L G+R
Sbjct: 281 GGQERGLRSGTGATQQIVG-FGAACELAMKE-----MEYDEKWIKGLQERL--LNGVREK 332
Query: 284 VDAVETN 290
+D V N
Sbjct: 333 LDGVVVN 339
>sp|Q6AMK5|SELA_DESPS L-seryl-tRNA(Sec) selenium transferase OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=selA PE=3 SV=1
Length = 466
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 25/198 (12%)
Query: 43 LETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG 102
+E + ++ G EA L V + +++ C RG+EVI+ S + E GG I
Sbjct: 132 VEDTICELTGAEAALVVNNNAAAVFLALDALC--RGTEVIV---SRGQLVEIGGSFRIPD 186
Query: 103 VHPRTVKNNQDGTMDIDLIEAA------IRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156
V R+ DL+E + D + I T+ L+ + ++ G V
Sbjct: 187 VMARS---------GADLVEVGATNRTHLYDYEDAISEQTSMLLRVHTSNFRIIGFTSEV 237
Query: 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP----VRRLVQAA-DSASVCLSKGLGA 211
+ VG KK+ L + G+ + G P V+ LV+A D + K LG
Sbjct: 238 PAEEMVGLARKKNLLTMEDLGSGSLIDLTSYGFPKEPTVQELVKAGVDVVTFSGDKLLGG 297
Query: 212 PVGSVIVGSKEFIKKARR 229
P +IVGSK +++ ++
Sbjct: 298 PQAGIIVGSKSVVERIKK 315
>sp|O96567|DDC_DROSI Aromatic-L-amino-acid decarboxylase OS=Drosophila simulans GN=Ddc
PE=3 SV=2
Length = 510
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLE 143
D +H + E G+ +GGV R+V++ ++ M +E AI E + P ++ L
Sbjct: 223 SDQAHSSV-ERAGL--LGGVKLRSVQS-ENHRMRGAALEKAIEQDLAEGLIPFYAVVTLG 278
Query: 144 NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP-VRRLVQAADSA 201
T++ + +Y D G + KH L +H+D A A A P R L++ +SA
Sbjct: 279 TTNS------CAFDYLDECGPVGNKHNLWIHVDAAY---AGSAFICPEYRHLMKGIESA 328
>sp|O30971|TNAA_RHOCA Tryptophanase OS=Rhodobacter capsulatus GN=tnaA PE=3 SV=1
Length = 454
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 110/289 (38%), Gaps = 40/289 (13%)
Query: 6 VDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM------------GK 53
+DL +D+ T +++ A+ D+ P+ FR E + +M
Sbjct: 45 IDLLTDSGTGAMSSLQ--WAAVMQGDESYAGSPSFFRFEAAVQNLMPFKHIIPTHQGRAA 102
Query: 54 EAGLFVPSGTMGNLISVLVHCET-RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ 112
EA LF G G I H +T RG+ G + G +HP
Sbjct: 103 EAILFSIFGGKGRRIPSNTHFDTTRGNIEASGATGDDLVIAEG--KDPQNLHPFK----- 155
Query: 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLK 172
G MD+ +EA + E+ L+ + T+ GG+ +S+ +V ++A ++G
Sbjct: 156 -GNMDLARLEAYLEAHHAEVP-----LVMITITNNAGGGQPVSLANIRAVADLAHRYGKP 209
Query: 173 LHIDGARIFNAAVAL----------GVP--VRRLVQAADSASVCLSKGLGAPVGSVIVGS 220
IDG R A + +P VR AD ++ K +G + +
Sbjct: 210 FVIDGCRFAENAWFIKTREEGQADRSIPEIVRDCFAVADGMTMSAKKDAFGNIGGWLALN 269
Query: 221 KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKL 269
+ + + R G G L L AL + ++ ++D D+ + ++
Sbjct: 270 DDDLAEEARGHLIRTEGFPTYGGLAGRDLDALAQGLVEIVDEDYLRYRI 318
>sp|P05031|DDC_DROME Aromatic-L-amino-acid decarboxylase OS=Drosophila melanogaster
GN=Ddc PE=1 SV=4
Length = 510
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLE 143
D +H + E G+ +GGV R+V++ ++ M +E AI E + P ++ L
Sbjct: 223 SDQAHSSV-ERAGL--LGGVKLRSVQS-ENHRMRGAALEKAIEQDVAEGLIPFYAVVTLG 278
Query: 144 NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP-VRRLVQAADSA 201
T++ + +Y D G + KH L +H+D A A A P R L++ +SA
Sbjct: 279 TTNS------CAFDYLDECGPVGNKHNLWIHVDAAY---AGSAFICPEYRHLMKGIESA 328
>sp|Q80WP8|GADL1_MOUSE Glutamate decarboxylase-like protein 1 OS=Mus musculus GN=Gadl1
PE=2 SV=3
Length = 550
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 17 TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG--LFVPSGTMGNLISVLV-- 72
TEA+ ++ + EV L+ + + +M + +G + G +F P G++ N+ ++ +
Sbjct: 165 TEALNPSIYTYEVSPVFLLVEEAVLK---KMIECVGWKEGDGIFNPGGSVSNMCAMNLAR 221
Query: 73 --HC---ETRG----SEVILGDNSHIHIYENGGIST--IGGVHPRTVKNNQDGTMDIDLI 121
HC + +G +IL ++ H S IG + V+ + G M + +
Sbjct: 222 YRHCPDIKEKGLSGLPRLILFTSAECHYSMKKAASFLGIGTQNVYFVETDGRGKMIPEDL 281
Query: 122 EAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARI 180
E I + E P L+C A G L + + D + E+ ++HGL LH+D +
Sbjct: 282 EKQIWQARQEGAVPF--LVC-----ATSGTTVLGAFDPLDEIAEVCERHGLWLHVDAS-- 332
Query: 181 FNAAVALGVPVRRL---VQAADSASVCLSKGLGA 211
+ + + RRL + ADS + K L A
Sbjct: 333 WGGSALVSRKHRRLLHGIHRADSVAWNPHKMLMA 366
>sp|Q5HT33|SELA_CAMJR L-seryl-tRNA(Sec) selenium transferase OS=Campylobacter jejuni
(strain RM1221) GN=selA PE=3 SV=1
Length = 440
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 164 EIAKKHGLKLHID----GARIFNAAVALGVP-VRRLVQAADSASVCLSKGLGAPVGSVIV 218
E+AK+ GL + D N + P +++LVQ D S K G+ +I+
Sbjct: 234 ELAKEKGLLSYYDLGSGWCENLNEKLIKNEPKIKKLVQECDILSFSGDKLFGSAQAGIIL 293
Query: 219 GSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKK---AKLLAEGLN 275
G KE I+K L++ M +V L L L E++ L D+KK KLL + L+
Sbjct: 294 GKKELIEK---LKQNQLLRMLRVDKL---TLSFLNESLKAYLQKDYKKIITLKLLNDDLS 347
Query: 276 --QLKGLRV 282
+ K LRV
Sbjct: 348 FIEKKALRV 356
>sp|P43099|DCOR_LACS3 Ornithine decarboxylase, inducible OS=Lactobacillus sp. (strain
30a) GN=odcI PE=1 SV=2
Length = 731
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 20 MRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRG 78
RA + +A+V D+L+H+ A E A+V + FV G+ +V + G
Sbjct: 155 FRADLCNADVALGDLLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNG 214
Query: 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD------GTMDIDLIEAAIRD 127
V+ N+H +Y N ++ GG P ++ N++ G D D E IR+
Sbjct: 215 DLVLFDRNNHKSVY-NSALAMAGG-RPVYLQTNRNPYGFIGGIYDSDFDEKKIRE 267
>sp|D9R201|TPL_CLOSW Tyrosine phenol-lyase OS=Clostridium saccharolyticum (strain ATCC
35040 / DSM 2544 / NRCC 2533 / WM1) GN=tpl PE=3 SV=1
Length = 468
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKL 173
G +D++ +A I + E + ICL T GG+ +S+ +V E+A KHG+K+
Sbjct: 159 GNIDLNKFQALIDEVGAERI----PYICLAVTVNLAGGQPVSMANVKAVSELAHKHGIKV 214
Query: 174 HIDGAR 179
D R
Sbjct: 215 MFDATR 220
>sp|Q8RHM6|TPL_FUSNN Tyrosine phenol-lyase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=tpl PE=3 SV=1
Length = 460
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 41 FRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGD----NSHIHIYENGG 96
F LE + ++ G + VP+ ++L + + + G+ + H NGG
Sbjct: 81 FHLEETVKEIFGFKH--IVPTHQGRGAENILSQIAIKPGQYVPGNMYFTTTRYHQERNGG 138
Query: 97 IST---IGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGE-IVYPTTRLICLENTHANCGGR 152
I H T+ G +D++ ++ I + E I Y +CL T GG+
Sbjct: 139 IFKDIIRDEAHDATLNVPFKGDIDLNKLQKLIDEVGAENIAY-----VCLAVTVNLAGGQ 193
Query: 153 CLSVEYTDSVGEIAKKHGLKLHIDGAR 179
+S++ +V E+ KKHG+K+ D R
Sbjct: 194 PVSMKNMKAVRELTKKHGIKVFYDATR 220
>sp|Q9CL27|TNAA_PASMU Tryptophanase OS=Pasteurella multocida (strain Pm70) GN=tnaA PE=3
SV=1
Length = 471
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 27/193 (13%)
Query: 6 VDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTM 64
+DL +D+ T T+ M+AAM D+ + L + ++ G E + G
Sbjct: 48 IDLLTDSGTGAVTQEMQAAMLRG---DEAYSGSRSYHALANAVKEIFGYEYTIPTHQGRG 104
Query: 65 GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG---VHPRTVKN----------- 110
I + V + R E L D S + ++ N T G ++ TV+N
Sbjct: 105 AEQIYIPVLIKKREQEKGL-DRSKMVVFSNYFFDTTQGHSQINGATVRNVYTKEAFDTSV 163
Query: 111 NQD--GTMDIDLIEAAIRDPKGE-IVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAK 167
N D G D++ +E I++ E + Y + C + GG+ +S+ ++ EIAK
Sbjct: 164 NADFKGDFDLEKLEQGIQEVGAENVPYIVCTITC-----NSAGGQPVSLANMRAMYEIAK 218
Query: 168 KHGLKLHIDGARI 180
K+ + + +D AR
Sbjct: 219 KYDIPVVMDSARF 231
>sp|Q07R90|GCSP_RHOP5 Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas
palustris (strain BisA53) GN=gcvP PE=3 SV=1
Length = 961
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 42 RLETEMAKVMGKEAGLFVPS----GTMGNLISVLVHCETRGSE----VILGDNSHIHIYE 93
+LET +A++ G +A P+ G L+++ + ++RG ++ ++H
Sbjct: 545 KLETWLAEITGYDAVSLQPNSGAQGEYAGLLAIRGYYKSRGEPHRKICLIPSSAH---GT 601
Query: 94 NGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTR--LICLENTHANCGG 151
N + + G+ V+ N G +D+D + A + E+ P +I +TH
Sbjct: 602 NPASAAMAGMEVVVVECNDRGDVDVDDLRA-----RAELHSPNLAAVMITYPSTHG---- 652
Query: 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190
+ E+ + +I HG ++++DGA + NA V L P
Sbjct: 653 --VFEEHIRDICDIVHAHGGQVYLDGANL-NAQVGLARP 688
>sp|Q8R9K5|TNAA_THETN Tryptophanase OS=Thermoanaerobacter tengcongensis (strain DSM 15242
/ JCM 11007 / NBRC 100824 / MB4) GN=tnaA PE=3 SV=1
Length = 462
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKL 173
G D++ +E I++ E I T + GG+ +S+E V IA K+G++L
Sbjct: 160 GNFDVEALENFIKEKGAE----NIAFILATVTCNSAGGQPVSMENIKEVRRIADKYGIRL 215
Query: 174 HIDGARI 180
D AR
Sbjct: 216 FFDAARF 222
>sp|Q9K625|BIOF_BACHD Putative 8-amino-7-oxononanoate synthase OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=bioF PE=3 SV=1
Length = 395
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 124/318 (38%), Gaps = 36/318 (11%)
Query: 44 ETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGV 103
E E+ K EA L SG M N + ++ RG V +H I + +S
Sbjct: 92 EYELTKWKKTEAALIFGSGYMAN-VGIISSIVGRGDAVFSDKLNHASIVDGCQLSRAD-- 148
Query: 104 HPRTVKNNQDGTMDIDLIEAAI-RDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162
H R N D+D +E + + P + + L ++ HAN +
Sbjct: 149 HLRFRHN------DMDHLETLLQKSPHKQKLIVVDALFSMDGDHANL----------HDL 192
Query: 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV---CLSKGLGAPVGSVIVG 219
+ +++G L +D A A G + + D + SK LG+ G + G
Sbjct: 193 VTLKERYGAILMVDEAHSGGVYGATGGGLVEELGLNDRVDIQMGTFSKALGS-YGGYVAG 251
Query: 220 SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGL-NQLK 278
+K FI+ ++L + A+ L ALQ ++ +K ++L E L N L+
Sbjct: 252 AKPFIEYLLNHARSLIFTTALPPYIVASHLAALQ--IVQEQPWRREKVQVLGERLRNGLE 309
Query: 279 GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMP-------ESSTRVRIVVH 331
L + E+ IV I ++ L + L+ G+ +P R+R+ V
Sbjct: 310 QLGFSLCGSESYIVPVLIGDNHDLLLVS--ESLQAAGIAAIPVRPPTVPRGEGRIRLTVT 367
Query: 332 HQISANDVHYTLSCFQKI 349
+ D+ + + FQ++
Sbjct: 368 ASHTEKDIDWAIEQFQRL 385
>sp|Q9K936|GCSPB_BACHD Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=gcvPB PE=3 SV=1
Length = 488
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 41 FRLETEMAKVMGKEAGLFVPS----GTMGNLISVLVHCETRG----SEVILGDNSHIHIY 92
+ L+T +A++ G + P+ G L+ + + E G ++VI+ D++H
Sbjct: 118 YELQTALAEITGMDEVTLQPAAGAQGEWTGLMLIRAYHEANGDTNRTKVIVPDSAHG--- 174
Query: 93 ENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152
N +T+ G TV+ ++DG +D+D + E+V T + L T+ N G
Sbjct: 175 TNPASATVAGFESVTVRTDEDGLVDLDHLR--------EVVGEDTAALML--TNPNTLG- 223
Query: 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189
L + + I + G KL+ DGA N+ LG+
Sbjct: 224 -LFEAHIVEMAAIIHEAGGKLYYDGA---NSNAILGI 256
>sp|Q5WF32|GCSPB_BACSK Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Bacillus clausii (strain KSM-K16) GN=gcvPB PE=3 SV=1
Length = 491
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 41 FRLETEMAKVMGKEAGLFVPS----GTMGNLISVLVHCETRG----SEVILGDNSHIHIY 92
+ L+T +A++ G + P+ G L+ + + E G ++V++ D++H
Sbjct: 119 YSLQTALAEITGMDEVTLQPAAGAHGEWTGLMMIRAYHEANGDKKRTKVVVPDSAHG--- 175
Query: 93 ENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152
N +T+ G TV+ N+ G +D+D + E+V T + L T+ N G
Sbjct: 176 TNPASATVAGFESVTVRTNEAGLVDLDHLR--------EVVNEETAALML--TNPNTLG- 224
Query: 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189
L + +I + G KL+ DGA N+ LG+
Sbjct: 225 -LFEADIQEMADIIHRAGGKLYYDGA---NSNAILGI 257
>sp|Q8XHH5|Y2509_CLOPE DegV domain-containing protein CPE2509 OS=Clostridium perfringens
(strain 13 / Type A) GN=CPE2509 PE=4 SV=1
Length = 281
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 107 TVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEI 165
T+ +D ++I ++ +D + ++ + EN H L S +Y +SV +
Sbjct: 15 TIDEIKDYNLNILPLKIIYKDREYNDIFDIKPIDVYENLHNEVPTTSLCSPDYINSVLDK 74
Query: 166 AKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCL--SKGLGAPVGSVIVGSKEF 223
+ G H+ G I ++ R +++ S L SK +G P+GS+++ + EF
Sbjct: 75 LEAEGYT-HLIGIFISSSLSGTFNAARLVIEERSSFKYYLFDSKIIGYPLGSIVIKAAEF 133
Query: 224 IKKARRLRKTL 234
+K+ + + +
Sbjct: 134 VKEGKSFEEII 144
>sp|Q47EN5|ISCS_DECAR Cysteine desulfurase OS=Dechloromonas aromatica (strain RCB)
GN=iscS PE=3 SV=1
Length = 405
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 22/173 (12%)
Query: 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGE 131
+ T+G +I H I + G + +DG +D+++ +AAIR
Sbjct: 89 FYASTKGKHIITVKTEHKAILDTVREMERQGFEATYLDVKEDGLLDLEVFKAAIR----- 143
Query: 132 IVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV 191
P T L + + G ++ +GEI ++ G+ H+D A+ A + + +
Sbjct: 144 ---PDTVLASVMFVNNEVG----VIQPIAELGEICREKGIIFHVDAAQ---ATGKVDIDL 193
Query: 192 RRLVQAADSASVCLSKGLGAP-VGSVIVGSKEFIKKARRLRKTLGGGMRQVGV 243
+L D S C K G +G++ V K I RL + GG + G
Sbjct: 194 SKL--KVDLMSFCAHKTYGPKGIGALYVRRKPRI----RLEAQMHGGGHERGF 240
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,888,486
Number of Sequences: 539616
Number of extensions: 5494574
Number of successful extensions: 15834
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 15766
Number of HSP's gapped (non-prelim): 167
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)